Query 017335
Match_columns 373
No_of_seqs 133 out of 1310
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 07:40:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017335.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017335hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 2.8E-63 6E-68 464.0 29.0 320 13-370 1-325 (339)
2 COG1062 AdhC Zn-dependent alco 100.0 8.1E-63 1.7E-67 451.6 29.8 348 14-369 1-354 (366)
3 KOG0022 Alcohol dehydrogenase, 100.0 1.2E-61 2.6E-66 436.9 30.5 356 10-369 2-363 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.7E-56 3.7E-61 406.5 27.4 321 13-363 2-327 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 1.3E-54 2.8E-59 393.2 26.1 335 7-370 1-342 (360)
6 PLN02740 Alcohol dehydrogenase 100.0 1.8E-51 3.9E-56 401.9 34.1 360 8-369 3-369 (381)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 5.7E-51 1.2E-55 397.1 34.0 346 16-369 1-360 (371)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.6E-50 5.7E-55 392.0 34.8 350 16-369 2-356 (368)
9 cd08300 alcohol_DH_class_III c 100.0 5.2E-50 1.1E-54 389.9 35.4 352 14-369 1-357 (368)
10 cd08301 alcohol_DH_plants Plan 100.0 7.9E-50 1.7E-54 388.7 34.8 352 14-370 1-359 (369)
11 TIGR03451 mycoS_dep_FDH mycoth 100.0 5.2E-50 1.1E-54 388.5 33.4 338 15-369 1-346 (358)
12 cd08239 THR_DH_like L-threonin 100.0 6.1E-49 1.3E-53 377.9 32.8 320 16-369 1-327 (339)
13 PLN02827 Alcohol dehydrogenase 100.0 1.5E-48 3.2E-53 380.8 34.5 350 10-369 7-364 (378)
14 cd08277 liver_alcohol_DH_like 100.0 4.8E-48 1E-52 375.7 35.4 349 14-369 1-354 (365)
15 PLN02586 probable cinnamyl alc 100.0 3.7E-48 8E-53 375.7 32.0 328 7-369 4-340 (360)
16 PRK09880 L-idonate 5-dehydroge 100.0 3.3E-48 7.2E-53 373.8 31.4 318 12-369 1-330 (343)
17 COG1063 Tdh Threonine dehydrog 100.0 4.7E-48 1E-52 372.6 29.7 323 16-368 1-335 (350)
18 COG0604 Qor NADPH:quinone redu 100.0 3.6E-47 7.8E-52 362.3 30.8 301 16-369 1-312 (326)
19 TIGR02819 fdhA_non_GSH formald 100.0 4.9E-47 1.1E-51 371.4 31.0 324 15-369 2-378 (393)
20 PLN02178 cinnamyl-alcohol dehy 100.0 4.7E-46 1E-50 362.5 31.9 320 15-369 4-335 (375)
21 TIGR03201 dearomat_had 6-hydro 100.0 8.6E-46 1.9E-50 357.8 31.8 318 19-369 2-336 (349)
22 PRK10309 galactitol-1-phosphat 100.0 1.3E-45 2.8E-50 356.2 32.2 321 16-369 1-333 (347)
23 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.1E-45 2.4E-50 354.2 30.0 309 18-369 1-317 (329)
24 cd08230 glucose_DH Glucose deh 100.0 2.5E-45 5.5E-50 355.3 30.9 319 16-369 1-344 (355)
25 PLN02514 cinnamyl-alcohol dehy 100.0 6.9E-45 1.5E-49 352.5 33.0 322 13-369 7-337 (357)
26 cd08299 alcohol_DH_class_I_II_ 100.0 4.4E-44 9.6E-49 348.8 35.3 351 12-368 4-360 (373)
27 cd08278 benzyl_alcohol_DH Benz 100.0 4.5E-44 9.7E-49 347.9 34.4 346 14-367 1-352 (365)
28 cd08233 butanediol_DH_like (2R 100.0 3.9E-44 8.4E-49 346.3 32.9 320 16-369 1-338 (351)
29 cd08231 MDR_TM0436_like Hypoth 100.0 1.1E-43 2.4E-48 344.3 33.0 331 17-369 2-349 (361)
30 cd05279 Zn_ADH1 Liver alcohol 100.0 2.1E-43 4.5E-48 343.2 34.0 347 16-368 1-353 (365)
31 cd08296 CAD_like Cinnamyl alco 100.0 1.4E-42 3.1E-47 333.1 32.6 316 16-368 1-320 (333)
32 cd08285 NADP_ADH NADP(H)-depen 100.0 1.6E-42 3.5E-47 335.0 32.2 325 16-369 1-337 (351)
33 KOG1197 Predicted quinone oxid 100.0 4.2E-43 9E-48 308.0 23.2 301 11-369 4-317 (336)
34 cd08237 ribitol-5-phosphate_DH 100.0 1.2E-42 2.6E-47 334.8 27.7 298 15-362 2-317 (341)
35 PRK10083 putative oxidoreducta 100.0 1.1E-41 2.4E-46 327.4 31.6 314 16-368 1-322 (339)
36 cd08238 sorbose_phosphate_red 100.0 1E-41 2.2E-46 336.2 31.5 315 14-369 1-356 (410)
37 cd05284 arabinose_DH_like D-ar 100.0 2.1E-41 4.4E-46 325.4 32.2 319 16-368 1-326 (340)
38 cd08256 Zn_ADH2 Alcohol dehydr 100.0 3.2E-41 6.8E-46 325.8 31.6 318 16-368 1-338 (350)
39 cd08279 Zn_ADH_class_III Class 100.0 7E-41 1.5E-45 325.2 33.5 345 16-369 1-352 (363)
40 cd08246 crotonyl_coA_red croto 100.0 1.4E-40 3E-45 326.4 31.5 333 7-368 4-378 (393)
41 cd08283 FDH_like_1 Glutathione 100.0 2.3E-40 5E-45 324.2 33.0 335 16-368 1-371 (386)
42 cd05278 FDH_like Formaldehyde 100.0 1.5E-40 3.2E-45 320.2 30.9 323 16-368 1-332 (347)
43 cd08260 Zn_ADH6 Alcohol dehydr 100.0 3.5E-40 7.6E-45 317.7 32.9 322 16-368 1-331 (345)
44 cd08240 6_hydroxyhexanoate_dh_ 100.0 2E-40 4.3E-45 320.2 30.9 322 16-368 1-336 (350)
45 TIGR01202 bchC 2-desacetyl-2-h 100.0 2.2E-40 4.7E-45 314.8 26.8 289 15-370 1-297 (308)
46 cd08286 FDH_like_ADH2 formalde 100.0 1.1E-39 2.4E-44 314.3 31.6 319 16-368 1-329 (345)
47 TIGR03366 HpnZ_proposed putati 100.0 1.4E-39 3.1E-44 305.0 28.8 255 74-360 1-273 (280)
48 TIGR01751 crot-CoA-red crotony 100.0 3.8E-39 8.2E-44 316.8 30.8 328 12-368 4-373 (398)
49 cd08263 Zn_ADH10 Alcohol dehyd 100.0 9.5E-39 2.1E-43 310.6 33.1 342 16-367 1-353 (367)
50 PRK13771 putative alcohol dehy 100.0 3.4E-39 7.3E-44 309.3 29.4 314 16-368 1-319 (334)
51 cd08261 Zn_ADH7 Alcohol dehydr 100.0 9.6E-39 2.1E-43 306.8 32.4 315 16-368 1-322 (337)
52 PRK05396 tdh L-threonine 3-deh 100.0 5.8E-39 1.3E-43 308.9 30.8 320 16-368 1-327 (341)
53 cd08291 ETR_like_1 2-enoyl thi 100.0 3.1E-39 6.8E-44 308.7 28.3 296 16-369 1-312 (324)
54 cd08284 FDH_like_2 Glutathione 100.0 1.1E-38 2.5E-43 306.9 32.1 319 16-367 1-330 (344)
55 cd08264 Zn_ADH_like2 Alcohol d 100.0 5.5E-39 1.2E-43 306.7 29.7 310 16-368 1-314 (325)
56 cd05283 CAD1 Cinnamyl alcohol 100.0 6.9E-39 1.5E-43 308.0 30.2 321 17-369 1-325 (337)
57 PRK09422 ethanol-active dehydr 100.0 1.4E-38 2.9E-43 305.6 31.9 317 16-368 1-322 (338)
58 KOG0025 Zn2+-binding dehydroge 100.0 2.5E-39 5.4E-44 289.0 24.7 310 6-371 10-340 (354)
59 cd08287 FDH_like_ADH3 formalde 100.0 1.6E-38 3.5E-43 306.1 32.3 316 16-367 1-331 (345)
60 cd08297 CAD3 Cinnamyl alcohol 100.0 2.2E-38 4.7E-43 304.7 33.2 320 16-368 1-327 (341)
61 cd08282 PFDH_like Pseudomonas 100.0 1.3E-38 2.8E-43 310.6 31.9 328 16-368 1-362 (375)
62 cd08235 iditol_2_DH_like L-idi 100.0 2.6E-38 5.6E-43 304.3 32.6 319 16-368 1-331 (343)
63 cd08258 Zn_ADH4 Alcohol dehydr 100.0 6.8E-38 1.5E-42 297.3 34.3 300 16-350 1-306 (306)
64 cd08265 Zn_ADH3 Alcohol dehydr 100.0 2.5E-38 5.4E-43 309.6 32.1 324 14-368 27-372 (384)
65 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 3.2E-38 6.9E-43 302.4 32.2 318 16-367 1-323 (338)
66 PLN02702 L-idonate 5-dehydroge 100.0 1E-37 2.2E-42 303.0 32.8 321 14-367 16-349 (364)
67 cd05285 sorbitol_DH Sorbitol d 100.0 1.6E-37 3.4E-42 299.2 31.6 317 18-368 1-328 (343)
68 cd08266 Zn_ADH_like1 Alcohol d 100.0 3E-37 6.5E-42 295.1 31.7 320 16-368 1-328 (342)
69 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2.6E-37 5.6E-42 297.2 31.1 308 16-368 1-328 (341)
70 cd08292 ETR_like_2 2-enoyl thi 100.0 1.6E-37 3.4E-42 296.1 29.0 295 16-368 1-311 (324)
71 cd08242 MDR_like Medium chain 100.0 2.4E-37 5.2E-42 294.7 30.2 299 16-369 1-307 (319)
72 cd08298 CAD2 Cinnamyl alcohol 100.0 3.2E-37 6.9E-42 295.0 31.1 310 16-368 1-317 (329)
73 cd08236 sugar_DH NAD(P)-depend 100.0 4.5E-37 9.9E-42 295.7 32.2 320 16-368 1-330 (343)
74 cd05281 TDH Threonine dehydrog 100.0 4.2E-37 9.2E-42 296.0 30.9 321 16-368 1-328 (341)
75 cd08259 Zn_ADH5 Alcohol dehydr 100.0 7.6E-37 1.7E-41 292.0 32.2 315 16-369 1-320 (332)
76 cd08245 CAD Cinnamyl alcohol d 100.0 6E-37 1.3E-41 293.3 31.2 314 17-368 1-318 (330)
77 cd08234 threonine_DH_like L-th 100.0 9.9E-37 2.1E-41 292.1 31.9 315 16-368 1-322 (334)
78 cd08232 idonate-5-DH L-idonate 100.0 6.4E-37 1.4E-41 294.2 30.3 310 20-368 2-325 (339)
79 TIGR00692 tdh L-threonine 3-de 100.0 2.4E-36 5.3E-41 290.6 30.5 314 22-368 5-327 (340)
80 cd08274 MDR9 Medium chain dehy 100.0 2.6E-36 5.6E-41 291.0 30.1 309 16-368 1-336 (350)
81 PLN03154 putative allyl alcoho 100.0 2.4E-36 5.1E-41 291.8 29.8 297 13-369 6-332 (348)
82 cd08295 double_bond_reductase_ 100.0 3E-36 6.6E-41 289.8 28.6 296 16-369 8-325 (338)
83 cd08294 leukotriene_B4_DH_like 100.0 1.7E-35 3.6E-40 282.9 29.3 288 15-368 2-315 (329)
84 TIGR02825 B4_12hDH leukotriene 100.0 1.8E-35 3.8E-40 282.9 29.3 277 28-369 19-313 (325)
85 cd08293 PTGR2 Prostaglandin re 100.0 1.3E-35 2.7E-40 285.9 27.9 283 28-368 23-331 (345)
86 cd08290 ETR 2-enoyl thioester 100.0 3.2E-35 7E-40 282.5 27.7 298 16-368 1-327 (341)
87 cd08276 MDR7 Medium chain dehy 100.0 2.9E-34 6.2E-39 274.4 32.7 315 16-368 1-322 (336)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 9.7E-35 2.1E-39 278.5 28.5 293 17-368 1-321 (336)
89 PTZ00354 alcohol dehydrogenase 100.0 2.9E-34 6.3E-39 274.4 29.4 296 15-367 1-313 (334)
90 cd08244 MDR_enoyl_red Possible 100.0 4.5E-34 9.8E-39 272.1 30.4 298 16-368 1-310 (324)
91 PRK10754 quinone oxidoreductas 100.0 2.4E-34 5.1E-39 275.0 27.4 296 15-367 1-312 (327)
92 cd08250 Mgc45594_like Mgc45594 100.0 7.2E-34 1.6E-38 271.7 28.6 295 15-368 1-316 (329)
93 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 9.3E-34 2E-38 270.0 29.2 299 16-368 1-311 (325)
94 cd05188 MDR Medium chain reduc 100.0 1.4E-33 3E-38 261.0 29.2 270 42-347 1-271 (271)
95 TIGR02823 oxido_YhdH putative 100.0 4.1E-33 8.8E-38 265.8 30.1 297 17-368 1-309 (323)
96 cd08289 MDR_yhfp_like Yhfp put 100.0 3.8E-33 8.3E-38 266.2 28.8 300 16-369 1-313 (326)
97 cd05282 ETR_like 2-enoyl thioe 100.0 2.9E-33 6.2E-38 266.4 27.7 284 28-368 14-310 (323)
98 cd08243 quinone_oxidoreductase 100.0 4E-33 8.7E-38 264.5 28.5 297 16-368 1-307 (320)
99 cd08269 Zn_ADH9 Alcohol dehydr 100.0 7.6E-33 1.7E-37 262.2 29.4 286 23-367 3-297 (312)
100 cd08249 enoyl_reductase_like e 100.0 3E-33 6.4E-38 269.2 26.0 296 16-368 1-324 (339)
101 cd08270 MDR4 Medium chain dehy 100.0 9.4E-33 2E-37 260.9 26.8 282 16-368 1-291 (305)
102 cd08252 AL_MDR Arginate lyase 100.0 1.8E-32 3.8E-37 262.7 29.0 295 16-368 1-323 (336)
103 cd05276 p53_inducible_oxidored 100.0 4.8E-32 1E-36 256.3 28.2 296 16-368 1-311 (323)
104 cd08288 MDR_yhdh Yhdh putative 100.0 1.2E-31 2.7E-36 255.6 29.5 298 16-368 1-310 (324)
105 KOG1198 Zinc-binding oxidoredu 100.0 1.3E-32 2.8E-37 262.9 21.9 286 28-369 20-332 (347)
106 cd08248 RTN4I1 Human Reticulon 100.0 2.3E-32 5E-37 263.5 23.9 294 16-368 1-337 (350)
107 cd08253 zeta_crystallin Zeta-c 100.0 2.5E-31 5.5E-36 251.8 30.5 300 16-368 1-311 (325)
108 cd05286 QOR2 Quinone oxidoredu 100.0 6.5E-31 1.4E-35 248.3 29.6 293 17-368 1-306 (320)
109 cd08271 MDR5 Medium chain dehy 100.0 3.7E-31 8.1E-36 251.6 27.1 293 16-367 1-310 (325)
110 COG2130 Putative NADP-dependen 100.0 2.4E-31 5.2E-36 240.2 24.2 282 28-370 27-326 (340)
111 cd08272 MDR6 Medium chain dehy 100.0 7.4E-31 1.6E-35 249.2 28.4 294 16-367 1-311 (326)
112 cd08268 MDR2 Medium chain dehy 100.0 1.6E-30 3.5E-35 246.9 30.1 300 16-367 1-313 (328)
113 cd05288 PGDH Prostaglandin deh 100.0 9.7E-31 2.1E-35 249.9 27.8 292 17-368 3-317 (329)
114 cd08273 MDR8 Medium chain dehy 100.0 1.6E-30 3.5E-35 248.5 27.9 292 17-368 2-318 (331)
115 TIGR02824 quinone_pig3 putativ 100.0 2.6E-30 5.5E-35 245.2 28.4 295 16-367 1-310 (325)
116 cd08247 AST1_like AST1 is a cy 100.0 5.1E-30 1.1E-34 247.8 29.1 301 16-368 1-338 (352)
117 cd08251 polyketide_synthase po 100.0 4.1E-30 8.9E-35 241.6 26.5 279 35-368 2-291 (303)
118 cd05289 MDR_like_2 alcohol deh 100.0 6.4E-30 1.4E-34 240.8 25.8 289 16-368 1-297 (309)
119 cd08241 QOR1 Quinone oxidoredu 100.0 2.6E-29 5.7E-34 237.8 29.0 294 16-367 1-309 (323)
120 cd08275 MDR3 Medium chain dehy 100.0 1.4E-28 3E-33 235.0 28.3 295 17-368 1-323 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 6.7E-29 1.5E-33 235.4 24.6 283 29-368 15-307 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 8.8E-29 1.9E-33 230.3 24.8 267 41-367 1-280 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 3.2E-28 6.9E-33 226.5 23.9 263 45-368 2-276 (288)
124 cd08255 2-desacetyl-2-hydroxye 99.9 2E-25 4.4E-30 208.3 22.1 232 70-369 19-265 (277)
125 KOG1196 Predicted NAD-dependen 99.9 1.1E-22 2.4E-27 183.6 25.9 274 36-370 33-328 (343)
126 KOG1202 Animal-type fatty acid 99.9 5.2E-23 1.1E-27 210.1 14.2 274 28-366 1429-1725(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 1.9E-23 4.2E-28 167.9 8.8 108 40-171 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.8 8.3E-18 1.8E-22 139.1 14.6 128 213-349 1-130 (130)
129 PRK09424 pntA NAD(P) transhydr 99.3 3.1E-11 6.6E-16 120.6 16.2 155 200-359 162-339 (509)
130 cd00401 AdoHcyase S-adenosyl-L 99.2 6E-10 1.3E-14 108.8 16.4 143 191-355 189-337 (413)
131 PF13602 ADH_zinc_N_2: Zinc-bi 98.6 2.9E-09 6.3E-14 87.4 -1.9 106 246-369 1-116 (127)
132 TIGR00561 pntA NAD(P) transhyd 98.6 4.9E-07 1.1E-11 90.4 11.8 127 201-330 162-312 (511)
133 TIGR01035 hemA glutamyl-tRNA r 98.4 2.3E-08 4.9E-13 98.9 -3.0 159 74-285 89-252 (417)
134 PRK05476 S-adenosyl-L-homocyst 98.3 1.3E-05 2.7E-10 78.9 13.7 103 190-308 198-302 (425)
135 PRK11873 arsM arsenite S-adeno 98.3 1.6E-06 3.4E-11 80.9 6.8 101 197-307 72-185 (272)
136 PRK08306 dipicolinate synthase 98.2 3.3E-05 7.1E-10 73.0 14.5 111 202-329 151-262 (296)
137 PRK00517 prmA ribosomal protei 98.2 1.6E-05 3.5E-10 73.2 11.5 133 156-307 78-215 (250)
138 TIGR00936 ahcY adenosylhomocys 98.2 3.5E-05 7.5E-10 75.4 14.0 100 192-307 183-284 (406)
139 PRK00045 hemA glutamyl-tRNA re 98.1 1.5E-07 3.2E-12 93.4 -4.8 160 74-285 91-254 (423)
140 PLN02494 adenosylhomocysteinas 98.0 7.4E-05 1.6E-09 73.9 12.5 101 191-307 241-343 (477)
141 cd05213 NAD_bind_Glutamyl_tRNA 98.0 2.1E-05 4.6E-10 74.9 8.6 109 166-286 139-251 (311)
142 COG2518 Pcm Protein-L-isoaspar 97.9 3.5E-05 7.7E-10 68.0 7.9 121 172-305 44-169 (209)
143 TIGR02853 spore_dpaA dipicolin 97.8 0.00028 6E-09 66.3 11.9 95 202-309 150-244 (287)
144 TIGR00518 alaDH alanine dehydr 97.8 0.00024 5.2E-09 69.2 11.8 101 202-311 166-273 (370)
145 PRK12771 putative glutamate sy 97.8 1.3E-05 2.8E-10 82.7 3.0 81 199-285 133-234 (564)
146 PTZ00075 Adenosylhomocysteinas 97.8 0.00039 8.5E-09 69.0 13.1 100 192-307 242-343 (476)
147 TIGR00406 prmA ribosomal prote 97.8 0.00021 4.5E-09 67.3 10.5 127 166-307 127-261 (288)
148 PRK08324 short chain dehydroge 97.6 0.00041 8.9E-09 73.2 11.1 137 156-307 386-559 (681)
149 PF01488 Shikimate_DH: Shikima 97.5 0.00052 1.1E-08 57.0 8.1 96 201-307 10-111 (135)
150 PRK11705 cyclopropane fatty ac 97.4 0.0015 3.3E-08 64.0 11.6 112 183-305 148-267 (383)
151 PF06325 PrmA: Ribosomal prote 97.4 0.001 2.2E-08 62.5 9.6 136 156-309 119-263 (295)
152 COG2242 CobL Precorrin-6B meth 97.4 0.0023 4.9E-08 55.5 10.8 102 195-306 27-136 (187)
153 PRK00377 cbiT cobalt-precorrin 97.4 0.003 6.6E-08 55.9 12.1 103 195-304 33-144 (198)
154 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0031 6.7E-08 57.0 12.2 104 202-307 4-137 (238)
155 PRK13943 protein-L-isoaspartat 97.3 0.0038 8.3E-08 59.6 12.2 103 194-304 72-179 (322)
156 PF11017 DUF2855: Protein of u 97.2 0.016 3.6E-07 54.6 15.4 137 156-306 90-232 (314)
157 PF00670 AdoHcyase_NAD: S-aden 97.2 0.015 3.3E-07 49.5 13.4 109 194-322 13-123 (162)
158 PF12847 Methyltransf_18: Meth 97.2 0.0015 3.4E-08 51.7 7.1 92 202-303 1-109 (112)
159 PRK13942 protein-L-isoaspartat 97.2 0.0059 1.3E-07 54.8 11.6 106 186-304 62-175 (212)
160 PRK13944 protein-L-isoaspartat 97.0 0.0054 1.2E-07 54.7 10.1 101 194-304 64-172 (205)
161 PF01135 PCMT: Protein-L-isoas 97.0 0.0013 2.8E-08 58.9 5.9 109 183-304 55-171 (209)
162 COG0300 DltE Short-chain dehyd 97.0 0.011 2.5E-07 54.5 12.0 81 201-283 4-94 (265)
163 COG4221 Short-chain alcohol de 97.0 0.0049 1.1E-07 55.7 9.2 79 202-283 5-91 (246)
164 TIGR00438 rrmJ cell division p 97.0 0.012 2.5E-07 51.7 11.5 103 197-306 27-147 (188)
165 COG2264 PrmA Ribosomal protein 97.0 0.0083 1.8E-07 56.2 10.8 140 156-309 120-267 (300)
166 TIGR02469 CbiT precorrin-6Y C5 96.8 0.022 4.8E-07 45.6 11.3 102 195-305 12-122 (124)
167 PRK07326 short chain dehydroge 96.8 0.02 4.3E-07 51.6 11.8 81 202-283 5-92 (237)
168 PF02826 2-Hacid_dh_C: D-isome 96.7 0.011 2.4E-07 51.5 9.3 90 201-306 34-128 (178)
169 TIGR00080 pimt protein-L-isoas 96.7 0.0045 9.8E-08 55.6 7.1 101 194-304 69-176 (215)
170 COG2519 GCD14 tRNA(1-methylade 96.7 0.013 2.8E-07 53.3 9.8 102 195-305 87-195 (256)
171 COG3967 DltE Short-chain dehyd 96.7 0.0084 1.8E-07 52.7 8.2 77 202-283 4-88 (245)
172 PRK05993 short chain dehydroge 96.7 0.011 2.4E-07 55.0 9.8 78 202-282 3-85 (277)
173 PRK05693 short chain dehydroge 96.7 0.0095 2.1E-07 55.2 9.3 77 204-283 2-82 (274)
174 PRK08177 short chain dehydroge 96.7 0.011 2.3E-07 53.2 9.3 78 204-283 2-81 (225)
175 PF01262 AlaDh_PNT_C: Alanine 96.7 0.0032 7E-08 54.3 5.6 105 203-310 20-144 (168)
176 PF13460 NAD_binding_10: NADH( 96.7 0.034 7.3E-07 48.1 12.0 91 206-306 1-98 (183)
177 PRK00811 spermidine synthase; 96.7 0.012 2.6E-07 55.2 9.7 96 201-305 75-191 (283)
178 PLN02366 spermidine synthase 96.6 0.026 5.7E-07 53.5 11.7 98 200-305 89-206 (308)
179 COG3288 PntA NAD/NADP transhyd 96.6 0.022 4.7E-07 53.0 10.6 153 197-351 158-337 (356)
180 PRK12742 oxidoreductase; Provi 96.6 0.049 1.1E-06 49.0 13.1 100 202-307 5-133 (237)
181 cd01080 NAD_bind_m-THF_DH_Cycl 96.6 0.021 4.6E-07 49.2 10.0 97 181-308 22-119 (168)
182 COG1748 LYS9 Saccharopine dehy 96.6 0.025 5.4E-07 55.1 11.5 96 204-307 2-101 (389)
183 PRK07806 short chain dehydroge 96.6 0.037 8E-07 50.3 12.3 103 202-306 5-135 (248)
184 PRK06182 short chain dehydroge 96.6 0.012 2.6E-07 54.6 9.1 79 202-283 2-84 (273)
185 PRK08265 short chain dehydroge 96.6 0.03 6.5E-07 51.5 11.6 81 202-283 5-90 (261)
186 PRK14967 putative methyltransf 96.6 0.045 9.8E-07 49.4 12.4 98 196-305 30-159 (223)
187 PF02353 CMAS: Mycolic acid cy 96.5 0.0023 5E-08 59.7 3.9 97 194-304 54-165 (273)
188 PRK06949 short chain dehydroge 96.5 0.014 3.1E-07 53.3 9.2 82 201-283 7-96 (258)
189 KOG1205 Predicted dehydrogenas 96.5 0.037 8E-07 51.6 11.7 113 202-315 11-159 (282)
190 PRK12939 short chain dehydroge 96.5 0.038 8.3E-07 50.1 11.8 81 202-283 6-94 (250)
191 COG2230 Cfa Cyclopropane fatty 96.5 0.012 2.6E-07 54.7 8.3 104 191-308 61-179 (283)
192 KOG1209 1-Acyl dihydroxyaceton 96.5 0.024 5.3E-07 50.1 9.7 81 202-283 6-91 (289)
193 PRK07109 short chain dehydroge 96.5 0.041 9E-07 52.8 12.4 79 202-283 7-95 (334)
194 PRK07060 short chain dehydroge 96.5 0.02 4.4E-07 51.8 9.8 77 202-283 8-87 (245)
195 PRK00107 gidB 16S rRNA methylt 96.5 0.018 3.9E-07 50.6 9.0 97 200-305 43-145 (187)
196 PRK04148 hypothetical protein; 96.5 0.018 4E-07 47.4 8.4 96 199-304 13-108 (134)
197 PRK08017 oxidoreductase; Provi 96.5 0.013 2.8E-07 53.5 8.3 77 204-283 3-84 (256)
198 PLN03209 translocon at the inn 96.5 0.044 9.5E-07 56.0 12.7 46 197-243 74-120 (576)
199 PRK11207 tellurite resistance 96.5 0.014 3E-07 51.7 8.2 98 195-304 23-133 (197)
200 COG0686 Ald Alanine dehydrogen 96.4 0.011 2.4E-07 55.1 7.5 99 203-311 168-274 (371)
201 PRK07231 fabG 3-ketoacyl-(acyl 96.4 0.052 1.1E-06 49.2 12.2 81 202-283 4-91 (251)
202 PRK12828 short chain dehydroge 96.4 0.05 1.1E-06 48.8 11.9 80 202-283 6-92 (239)
203 PRK00536 speE spermidine synth 96.4 0.014 2.9E-07 54.0 8.0 99 201-306 71-172 (262)
204 PRK12829 short chain dehydroge 96.4 0.018 3.9E-07 52.8 9.0 87 197-284 5-97 (264)
205 PRK07402 precorrin-6B methylas 96.4 0.077 1.7E-06 46.8 12.7 104 194-306 32-143 (196)
206 PRK06057 short chain dehydroge 96.4 0.019 4E-07 52.6 9.0 79 202-283 6-89 (255)
207 PRK13940 glutamyl-tRNA reducta 96.4 0.026 5.6E-07 55.8 10.4 99 198-307 176-275 (414)
208 PRK03369 murD UDP-N-acetylmura 96.4 0.02 4.2E-07 58.1 9.9 74 200-285 9-82 (488)
209 PRK06139 short chain dehydroge 96.4 0.017 3.7E-07 55.5 8.9 80 202-283 6-94 (330)
210 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.051 1.1E-06 54.4 12.3 78 202-282 209-293 (450)
211 PF08704 GCD14: tRNA methyltra 96.3 0.0099 2.1E-07 54.5 6.2 106 194-305 32-146 (247)
212 PRK12550 shikimate 5-dehydroge 96.3 0.04 8.6E-07 51.4 10.4 93 198-306 117-217 (272)
213 PRK06200 2,3-dihydroxy-2,3-dih 96.3 0.026 5.7E-07 51.9 9.2 81 202-283 5-90 (263)
214 PRK07502 cyclohexadienyl dehyd 96.2 0.038 8.2E-07 52.5 10.5 91 204-306 7-101 (307)
215 PRK07825 short chain dehydroge 96.2 0.027 6E-07 52.1 9.3 80 203-283 5-88 (273)
216 TIGR02356 adenyl_thiF thiazole 96.2 0.04 8.8E-07 49.0 9.9 35 202-236 20-54 (202)
217 COG2226 UbiE Methylase involve 96.2 0.06 1.3E-06 49.0 11.0 105 194-310 43-161 (238)
218 PRK01581 speE spermidine synth 96.2 0.068 1.5E-06 51.6 11.8 98 200-306 148-269 (374)
219 COG0031 CysK Cysteine synthase 96.2 0.13 2.7E-06 48.4 13.3 116 194-309 53-205 (300)
220 TIGR03840 TMPT_Se_Te thiopurin 96.2 0.036 7.9E-07 49.7 9.5 103 199-306 31-153 (213)
221 PRK12549 shikimate 5-dehydroge 96.2 0.056 1.2E-06 50.8 11.1 95 201-306 125-228 (284)
222 PRK08267 short chain dehydroge 96.2 0.064 1.4E-06 49.2 11.4 77 204-283 2-87 (260)
223 PRK08415 enoyl-(acyl carrier p 96.2 0.11 2.4E-06 48.4 13.0 104 202-307 4-145 (274)
224 COG0169 AroE Shikimate 5-dehyd 96.2 0.014 3.1E-07 54.5 6.8 96 201-306 124-227 (283)
225 PRK04457 spermidine synthase; 96.2 0.065 1.4E-06 49.7 11.3 94 201-303 65-175 (262)
226 PRK07814 short chain dehydroge 96.2 0.031 6.7E-07 51.5 9.1 80 202-282 9-96 (263)
227 PRK05872 short chain dehydroge 96.2 0.03 6.6E-07 52.7 9.2 79 202-283 8-95 (296)
228 PRK08618 ornithine cyclodeamin 96.1 0.061 1.3E-06 51.5 11.4 103 200-317 124-232 (325)
229 cd01075 NAD_bind_Leu_Phe_Val_D 96.1 0.096 2.1E-06 46.5 11.8 82 201-296 26-108 (200)
230 PRK08628 short chain dehydroge 96.1 0.084 1.8E-06 48.2 11.9 81 202-283 6-93 (258)
231 PRK09186 flagellin modificatio 96.1 0.088 1.9E-06 48.0 11.9 80 202-282 3-92 (256)
232 PRK05866 short chain dehydroge 96.1 0.036 7.9E-07 52.1 9.5 81 202-283 39-127 (293)
233 cd05311 NAD_bind_2_malic_enz N 96.1 0.11 2.3E-06 47.2 12.1 92 201-305 23-128 (226)
234 PRK14175 bifunctional 5,10-met 96.1 0.055 1.2E-06 50.6 10.3 95 182-308 137-233 (286)
235 TIGR01809 Shik-DH-AROM shikima 96.1 0.025 5.4E-07 53.1 8.2 76 202-284 124-201 (282)
236 TIGR03325 BphB_TodD cis-2,3-di 96.1 0.032 7E-07 51.3 8.9 80 202-282 4-88 (262)
237 PRK05867 short chain dehydroge 96.1 0.036 7.7E-07 50.7 9.0 81 202-283 8-96 (253)
238 PRK07677 short chain dehydroge 96.0 0.033 7.1E-07 50.9 8.7 79 203-282 1-87 (252)
239 PRK06718 precorrin-2 dehydroge 96.0 0.18 3.8E-06 44.9 13.1 92 202-306 9-101 (202)
240 COG0421 SpeE Spermidine syntha 96.0 0.077 1.7E-06 49.6 11.1 99 204-305 78-190 (282)
241 PRK06841 short chain dehydroge 96.0 0.039 8.4E-07 50.3 9.0 81 202-283 14-99 (255)
242 COG4122 Predicted O-methyltran 96.0 0.15 3.2E-06 45.8 12.3 110 197-310 54-171 (219)
243 PRK06180 short chain dehydroge 96.0 0.039 8.4E-07 51.3 9.0 80 203-283 4-88 (277)
244 TIGR00477 tehB tellurite resis 96.0 0.042 9.1E-07 48.5 8.7 99 194-304 22-132 (195)
245 PRK08317 hypothetical protein; 95.9 0.087 1.9E-06 47.3 11.0 103 194-306 11-125 (241)
246 TIGR01832 kduD 2-deoxy-D-gluco 95.9 0.055 1.2E-06 49.1 9.7 81 202-283 4-90 (248)
247 cd01065 NAD_bind_Shikimate_DH 95.9 0.061 1.3E-06 45.2 9.3 96 201-306 17-117 (155)
248 PRK08263 short chain dehydroge 95.9 0.087 1.9E-06 48.8 11.1 80 203-283 3-87 (275)
249 PRK06196 oxidoreductase; Provi 95.9 0.049 1.1E-06 51.7 9.6 81 202-283 25-109 (315)
250 PRK01683 trans-aconitate 2-met 95.9 0.094 2E-06 48.3 11.2 100 194-305 23-130 (258)
251 PRK06484 short chain dehydroge 95.9 0.088 1.9E-06 53.6 12.0 103 201-307 267-402 (520)
252 PRK05653 fabG 3-ketoacyl-(acyl 95.9 0.14 3E-06 46.0 12.2 79 202-283 4-92 (246)
253 PRK08217 fabG 3-ketoacyl-(acyl 95.9 0.064 1.4E-06 48.6 10.0 80 202-282 4-91 (253)
254 COG0373 HemA Glutamyl-tRNA red 95.9 0.14 2.9E-06 50.4 12.5 102 195-307 170-276 (414)
255 PLN02823 spermine synthase 95.9 0.073 1.6E-06 51.1 10.6 101 202-305 103-220 (336)
256 TIGR01470 cysG_Nterm siroheme 95.9 0.15 3.2E-06 45.5 11.8 93 202-306 8-101 (205)
257 PRK06128 oxidoreductase; Provi 95.9 0.12 2.6E-06 48.7 12.0 103 202-306 54-192 (300)
258 PRK08339 short chain dehydroge 95.9 0.061 1.3E-06 49.7 9.7 81 202-283 7-95 (263)
259 PRK00312 pcm protein-L-isoaspa 95.9 0.041 8.8E-07 49.2 8.3 107 183-304 61-174 (212)
260 PRK06505 enoyl-(acyl carrier p 95.9 0.05 1.1E-06 50.6 9.1 81 202-283 6-95 (271)
261 PRK14027 quinate/shikimate deh 95.9 0.079 1.7E-06 49.7 10.4 44 201-244 125-168 (283)
262 COG2227 UbiG 2-polyprenyl-3-me 95.8 0.074 1.6E-06 48.0 9.6 96 201-305 58-161 (243)
263 PRK06500 short chain dehydroge 95.8 0.058 1.3E-06 48.9 9.3 81 202-283 5-90 (249)
264 PRK07904 short chain dehydroge 95.8 0.07 1.5E-06 49.0 9.8 83 200-283 5-97 (253)
265 PRK06953 short chain dehydroge 95.8 0.064 1.4E-06 48.0 9.3 77 204-283 2-80 (222)
266 PRK07478 short chain dehydroge 95.8 0.059 1.3E-06 49.2 9.2 81 202-283 5-93 (254)
267 PRK07831 short chain dehydroge 95.8 0.058 1.3E-06 49.5 9.2 81 200-283 14-107 (262)
268 PRK14103 trans-aconitate 2-met 95.8 0.12 2.7E-06 47.5 11.3 97 194-304 21-125 (255)
269 PRK07832 short chain dehydroge 95.8 0.14 3.1E-06 47.3 11.8 76 205-283 2-88 (272)
270 PRK07062 short chain dehydroge 95.8 0.054 1.2E-06 49.8 8.9 79 202-283 7-97 (265)
271 PRK07454 short chain dehydroge 95.7 0.076 1.6E-06 48.0 9.6 82 201-283 4-93 (241)
272 PF13241 NAD_binding_7: Putati 95.7 0.097 2.1E-06 41.1 8.9 89 202-308 6-94 (103)
273 PRK04266 fibrillarin; Provisio 95.7 0.24 5.2E-06 44.9 12.7 102 196-304 66-175 (226)
274 PRK08594 enoyl-(acyl carrier p 95.7 0.15 3.2E-06 46.9 11.6 104 202-307 6-149 (257)
275 PRK06719 precorrin-2 dehydroge 95.7 0.11 2.5E-06 44.2 10.0 82 202-297 12-93 (157)
276 PRK08261 fabG 3-ketoacyl-(acyl 95.7 0.022 4.9E-07 56.9 6.6 93 197-308 28-126 (450)
277 cd00755 YgdL_like Family of ac 95.7 0.098 2.1E-06 47.5 10.1 98 203-304 11-133 (231)
278 PRK05875 short chain dehydroge 95.7 0.066 1.4E-06 49.5 9.3 80 202-282 6-95 (276)
279 PF03446 NAD_binding_2: NAD bi 95.7 0.2 4.3E-06 42.8 11.5 44 204-248 2-45 (163)
280 PRK07576 short chain dehydroge 95.7 0.071 1.5E-06 49.2 9.4 80 202-282 8-95 (264)
281 PF03435 Saccharop_dh: Sacchar 95.7 0.064 1.4E-06 52.6 9.5 91 206-304 1-97 (386)
282 PRK07533 enoyl-(acyl carrier p 95.7 0.066 1.4E-06 49.2 9.1 103 202-306 9-149 (258)
283 PRK12475 thiamine/molybdopteri 95.6 0.083 1.8E-06 50.9 9.9 36 202-237 23-58 (338)
284 CHL00194 ycf39 Ycf39; Provisio 95.6 0.14 3.1E-06 48.6 11.5 94 205-306 2-110 (317)
285 PRK07523 gluconate 5-dehydroge 95.6 0.073 1.6E-06 48.6 9.2 79 202-283 9-97 (255)
286 PLN02780 ketoreductase/ oxidor 95.6 0.061 1.3E-06 51.4 8.9 79 202-282 52-141 (320)
287 PRK09291 short chain dehydroge 95.6 0.071 1.5E-06 48.6 9.1 75 203-282 2-82 (257)
288 PRK11036 putative S-adenosyl-L 95.6 0.1 2.2E-06 48.1 10.1 93 201-304 43-148 (255)
289 PRK08340 glucose-1-dehydrogena 95.6 0.076 1.6E-06 48.7 9.3 78 205-283 2-86 (259)
290 PRK05717 oxidoreductase; Valid 95.6 0.077 1.7E-06 48.5 9.2 81 202-283 9-94 (255)
291 PRK09072 short chain dehydroge 95.6 0.093 2E-06 48.2 9.8 81 202-283 4-90 (263)
292 TIGR00507 aroE shikimate 5-deh 95.6 0.11 2.4E-06 48.4 10.3 93 200-306 114-215 (270)
293 PLN02781 Probable caffeoyl-CoA 95.6 0.2 4.3E-06 45.6 11.7 107 195-306 61-179 (234)
294 PRK07063 short chain dehydroge 95.6 0.075 1.6E-06 48.7 9.1 81 202-283 6-96 (260)
295 PRK07024 short chain dehydroge 95.6 0.087 1.9E-06 48.2 9.5 79 203-282 2-87 (257)
296 COG1179 Dinucleotide-utilizing 95.6 0.13 2.7E-06 46.6 9.9 102 202-306 29-154 (263)
297 PRK07774 short chain dehydroge 95.5 0.088 1.9E-06 47.8 9.4 81 202-283 5-93 (250)
298 PRK07890 short chain dehydroge 95.5 0.085 1.8E-06 48.1 9.3 81 202-283 4-92 (258)
299 PRK08643 acetoin reductase; Va 95.5 0.082 1.8E-06 48.3 9.1 80 203-283 2-89 (256)
300 PRK15116 sulfur acceptor prote 95.5 0.17 3.6E-06 47.1 11.0 102 202-306 29-154 (268)
301 PRK06603 enoyl-(acyl carrier p 95.5 0.081 1.8E-06 48.7 9.1 80 202-282 7-95 (260)
302 PLN02244 tocopherol O-methyltr 95.5 0.043 9.2E-07 53.0 7.4 94 201-305 117-223 (340)
303 PRK08703 short chain dehydroge 95.5 0.061 1.3E-06 48.6 8.1 81 202-283 5-97 (239)
304 PRK07574 formate dehydrogenase 95.5 0.13 2.8E-06 50.4 10.7 45 202-247 191-235 (385)
305 PRK06484 short chain dehydroge 95.5 0.25 5.4E-06 50.3 13.4 79 202-283 4-89 (520)
306 TIGR01318 gltD_gamma_fam gluta 95.5 0.076 1.7E-06 53.5 9.5 78 202-285 140-238 (467)
307 PRK06138 short chain dehydroge 95.5 0.088 1.9E-06 47.8 9.1 81 202-283 4-91 (252)
308 PLN02476 O-methyltransferase 95.5 0.17 3.7E-06 47.2 11.0 111 194-309 110-232 (278)
309 PLN03139 formate dehydrogenase 95.5 0.1 2.2E-06 51.1 9.9 46 202-248 198-243 (386)
310 PRK13394 3-hydroxybutyrate deh 95.5 0.11 2.5E-06 47.3 9.9 81 202-283 6-94 (262)
311 PTZ00098 phosphoethanolamine N 95.5 0.088 1.9E-06 48.8 9.1 102 194-306 44-157 (263)
312 PRK06198 short chain dehydroge 95.5 0.095 2.1E-06 47.9 9.3 80 202-283 5-94 (260)
313 PF02254 TrkA_N: TrkA-N domain 95.5 0.37 8.1E-06 38.2 11.7 92 206-304 1-95 (116)
314 cd01483 E1_enzyme_family Super 95.5 0.15 3.3E-06 42.4 9.7 32 205-236 1-32 (143)
315 TIGR03206 benzo_BadH 2-hydroxy 95.4 0.095 2.1E-06 47.5 9.2 80 202-282 2-89 (250)
316 PRK06181 short chain dehydroge 95.4 0.098 2.1E-06 48.0 9.4 80 203-283 1-88 (263)
317 PRK06172 short chain dehydroge 95.4 0.092 2E-06 47.8 9.1 81 202-283 6-94 (253)
318 PRK06125 short chain dehydroge 95.4 0.13 2.9E-06 47.1 10.2 79 202-283 6-91 (259)
319 PLN03075 nicotianamine synthas 95.4 0.11 2.3E-06 48.9 9.5 97 201-305 122-233 (296)
320 PRK07985 oxidoreductase; Provi 95.4 0.21 4.5E-06 47.0 11.7 103 202-306 48-186 (294)
321 PRK06940 short chain dehydroge 95.4 0.18 3.9E-06 46.8 11.1 101 203-306 2-126 (275)
322 PRK05854 short chain dehydroge 95.4 0.095 2.1E-06 49.8 9.4 79 202-283 13-103 (313)
323 cd01078 NAD_bind_H4MPT_DH NADP 95.4 0.21 4.5E-06 43.9 10.9 97 202-307 27-131 (194)
324 PRK08213 gluconate 5-dehydroge 95.4 0.1 2.2E-06 47.7 9.4 81 202-283 11-99 (259)
325 PF07021 MetW: Methionine bios 95.4 0.17 3.8E-06 44.2 10.0 72 199-279 10-81 (193)
326 PRK12384 sorbitol-6-phosphate 95.4 0.088 1.9E-06 48.1 8.9 79 203-282 2-90 (259)
327 PRK06197 short chain dehydroge 95.4 0.1 2.2E-06 49.3 9.5 80 202-282 15-104 (306)
328 PRK12809 putative oxidoreducta 95.4 0.091 2E-06 55.2 9.9 77 202-284 309-406 (639)
329 PRK07035 short chain dehydroge 95.4 0.1 2.2E-06 47.5 9.2 80 202-282 7-94 (252)
330 PRK07688 thiamine/molybdopteri 95.4 0.11 2.3E-06 50.2 9.6 36 202-237 23-58 (339)
331 PRK08287 cobalt-precorrin-6Y C 95.4 0.26 5.7E-06 43.0 11.4 99 195-305 24-131 (187)
332 PRK05690 molybdopterin biosynt 95.4 0.12 2.5E-06 47.5 9.4 36 202-237 31-66 (245)
333 PRK08690 enoyl-(acyl carrier p 95.4 0.099 2.2E-06 48.2 9.1 81 202-283 5-94 (261)
334 TIGR02355 moeB molybdopterin s 95.4 0.1 2.2E-06 47.7 9.0 35 203-237 24-58 (240)
335 PRK06482 short chain dehydroge 95.4 0.1 2.2E-06 48.3 9.2 79 204-283 3-86 (276)
336 PRK08589 short chain dehydroge 95.4 0.094 2E-06 48.6 9.0 79 202-283 5-92 (272)
337 PRK06101 short chain dehydroge 95.3 0.12 2.6E-06 46.9 9.5 42 204-246 2-44 (240)
338 PRK08277 D-mannonate oxidoredu 95.3 0.1 2.3E-06 48.3 9.3 80 202-282 9-96 (278)
339 PRK07340 ornithine cyclodeamin 95.3 0.096 2.1E-06 49.7 9.1 104 200-318 122-229 (304)
340 PRK06483 dihydromonapterin red 95.3 0.13 2.7E-06 46.4 9.5 79 203-283 2-84 (236)
341 PRK08251 short chain dehydroge 95.3 0.12 2.6E-06 46.9 9.5 79 203-282 2-90 (248)
342 PRK12548 shikimate 5-dehydroge 95.3 0.16 3.4E-06 47.9 10.4 97 202-306 125-237 (289)
343 PRK06194 hypothetical protein; 95.3 0.11 2.3E-06 48.4 9.3 81 202-283 5-93 (287)
344 PRK06914 short chain dehydroge 95.3 0.11 2.3E-06 48.2 9.3 79 203-283 3-91 (280)
345 PRK12823 benD 1,6-dihydroxycyc 95.3 0.088 1.9E-06 48.2 8.6 78 202-282 7-93 (260)
346 TIGR00138 gidB 16S rRNA methyl 95.3 0.13 2.8E-06 44.9 9.2 92 202-304 42-141 (181)
347 PRK12937 short chain dehydroge 95.3 0.35 7.6E-06 43.6 12.4 104 202-307 4-141 (245)
348 PF00899 ThiF: ThiF family; I 95.3 0.11 2.4E-06 42.8 8.3 97 203-305 2-124 (135)
349 PRK11188 rrmJ 23S rRNA methylt 95.3 0.32 7E-06 43.4 11.7 100 197-304 45-164 (209)
350 PRK06079 enoyl-(acyl carrier p 95.2 0.11 2.5E-06 47.5 9.0 80 202-282 6-92 (252)
351 PRK08644 thiamine biosynthesis 95.2 0.16 3.4E-06 45.6 9.6 35 202-236 27-61 (212)
352 PRK08085 gluconate 5-dehydroge 95.2 0.14 3E-06 46.8 9.5 81 202-283 8-96 (254)
353 PRK09242 tropinone reductase; 95.2 0.13 2.8E-06 47.0 9.4 81 202-283 8-98 (257)
354 PLN02253 xanthoxin dehydrogena 95.2 0.1 2.2E-06 48.4 8.8 81 202-283 17-104 (280)
355 PRK07453 protochlorophyllide o 95.2 0.12 2.6E-06 49.2 9.4 78 202-282 5-92 (322)
356 PRK15469 ghrA bifunctional gly 95.2 0.12 2.7E-06 49.1 9.3 36 202-238 135-170 (312)
357 PRK12429 3-hydroxybutyrate deh 95.2 0.13 2.7E-06 46.9 9.2 80 202-282 3-90 (258)
358 PLN02233 ubiquinone biosynthes 95.2 0.2 4.4E-06 46.4 10.6 102 196-307 67-184 (261)
359 PRK07417 arogenate dehydrogena 95.2 0.16 3.5E-06 47.5 10.0 87 205-305 2-91 (279)
360 cd00757 ThiF_MoeB_HesA_family 95.2 0.23 5E-06 45.0 10.7 35 203-237 21-55 (228)
361 cd01492 Aos1_SUMO Ubiquitin ac 95.2 0.18 3.9E-06 44.6 9.7 99 202-305 20-142 (197)
362 PRK13656 trans-2-enoyl-CoA red 95.1 0.35 7.6E-06 47.2 12.2 83 201-285 39-143 (398)
363 PRK05876 short chain dehydroge 95.1 0.13 2.8E-06 47.9 9.2 81 202-283 5-93 (275)
364 PRK07074 short chain dehydroge 95.1 0.13 2.9E-06 46.8 9.2 80 203-283 2-87 (257)
365 TIGR02354 thiF_fam2 thiamine b 95.1 0.075 1.6E-06 47.2 7.1 35 202-236 20-54 (200)
366 PRK12367 short chain dehydroge 95.1 0.16 3.4E-06 46.6 9.5 75 202-283 13-89 (245)
367 PLN00203 glutamyl-tRNA reducta 95.1 0.13 2.9E-06 52.2 9.8 97 203-307 266-371 (519)
368 PRK12826 3-ketoacyl-(acyl-carr 95.1 0.13 2.9E-06 46.4 9.0 81 202-283 5-93 (251)
369 PRK14192 bifunctional 5,10-met 95.1 0.18 3.9E-06 47.3 9.8 83 195-308 150-234 (283)
370 PRK07067 sorbitol dehydrogenas 95.1 0.16 3.4E-06 46.5 9.4 80 202-282 5-89 (257)
371 PRK08862 short chain dehydroge 95.1 0.16 3.4E-06 45.9 9.2 80 202-282 4-92 (227)
372 PRK08226 short chain dehydroge 95.0 0.15 3.2E-06 46.8 9.2 81 202-283 5-92 (263)
373 TIGR00417 speE spermidine synt 95.0 0.27 6E-06 45.7 11.0 96 201-305 71-186 (270)
374 TIGR00563 rsmB ribosomal RNA s 95.0 0.26 5.5E-06 49.1 11.4 101 195-304 231-367 (426)
375 PRK06124 gluconate 5-dehydroge 95.0 0.17 3.6E-06 46.2 9.5 81 202-283 10-98 (256)
376 TIGR02752 MenG_heptapren 2-hep 95.0 0.12 2.7E-06 46.6 8.4 103 194-306 37-152 (231)
377 PRK06720 hypothetical protein; 95.0 0.21 4.5E-06 43.1 9.4 80 202-282 15-102 (169)
378 PRK06179 short chain dehydroge 95.0 0.068 1.5E-06 49.3 6.9 77 203-283 4-83 (270)
379 PRK06114 short chain dehydroge 95.0 0.16 3.6E-06 46.3 9.3 81 202-283 7-96 (254)
380 PRK08328 hypothetical protein; 95.0 0.13 2.8E-06 46.8 8.5 36 202-237 26-61 (231)
381 PRK12481 2-deoxy-D-gluconate 3 95.0 0.15 3.2E-06 46.6 9.0 81 202-283 7-93 (251)
382 PRK06701 short chain dehydroge 95.0 0.32 7E-06 45.6 11.4 104 201-306 44-182 (290)
383 PF01209 Ubie_methyltran: ubiE 95.0 0.084 1.8E-06 48.1 7.2 105 195-309 40-157 (233)
384 PF01596 Methyltransf_3: O-met 95.0 0.067 1.5E-06 47.7 6.4 103 200-307 43-157 (205)
385 PRK07666 fabG 3-ketoacyl-(acyl 95.0 0.16 3.5E-06 45.8 9.1 81 202-283 6-94 (239)
386 PRK06113 7-alpha-hydroxysteroi 95.0 0.16 3.4E-06 46.4 9.1 81 202-283 10-98 (255)
387 PF00106 adh_short: short chai 95.0 0.13 2.8E-06 43.5 8.0 80 204-283 1-90 (167)
388 PRK06077 fabG 3-ketoacyl-(acyl 95.0 0.51 1.1E-05 42.7 12.5 103 203-307 6-142 (252)
389 PF13659 Methyltransf_26: Meth 94.9 0.15 3.3E-06 40.5 7.9 93 203-304 1-114 (117)
390 PRK06398 aldose dehydrogenase; 94.9 0.085 1.8E-06 48.5 7.3 74 202-283 5-82 (258)
391 PF03807 F420_oxidored: NADP o 94.9 0.31 6.7E-06 37.3 9.4 85 205-304 1-93 (96)
392 PRK07984 enoyl-(acyl carrier p 94.9 0.18 3.9E-06 46.6 9.4 80 202-282 5-93 (262)
393 PRK08159 enoyl-(acyl carrier p 94.9 0.16 3.5E-06 47.1 9.2 81 201-282 8-97 (272)
394 PRK07856 short chain dehydroge 94.9 0.12 2.7E-06 47.0 8.3 77 202-283 5-85 (252)
395 PRK08264 short chain dehydroge 94.9 0.19 4.1E-06 45.2 9.4 77 202-283 5-83 (238)
396 PF01564 Spermine_synth: Sperm 94.8 0.13 2.8E-06 47.2 8.2 97 201-305 75-191 (246)
397 PRK05884 short chain dehydroge 94.8 0.21 4.6E-06 44.8 9.5 74 205-282 2-78 (223)
398 COG0334 GdhA Glutamate dehydro 94.8 0.31 6.8E-06 47.5 11.0 44 194-238 197-241 (411)
399 PRK13255 thiopurine S-methyltr 94.8 0.36 7.7E-06 43.5 10.8 100 198-304 33-154 (218)
400 PRK12747 short chain dehydroge 94.8 0.47 1E-05 43.1 11.9 104 202-307 3-146 (252)
401 PRK08762 molybdopterin biosynt 94.8 0.16 3.4E-06 49.8 9.1 35 202-236 134-168 (376)
402 PRK08993 2-deoxy-D-gluconate 3 94.8 0.19 4.1E-06 45.9 9.2 81 202-283 9-95 (253)
403 PRK10538 malonic semialdehyde 94.8 0.18 3.9E-06 45.8 9.1 78 205-283 2-84 (248)
404 PRK12769 putative oxidoreducta 94.8 0.15 3.3E-06 53.6 9.5 76 202-283 326-422 (654)
405 PF10727 Rossmann-like: Rossma 94.8 0.12 2.7E-06 42.3 7.0 79 203-296 10-90 (127)
406 PRK08220 2,3-dihydroxybenzoate 94.8 0.32 7E-06 44.1 10.7 76 202-283 7-86 (252)
407 cd01487 E1_ThiF_like E1_ThiF_l 94.7 0.21 4.6E-06 43.2 8.7 33 205-237 1-33 (174)
408 PRK12936 3-ketoacyl-(acyl-carr 94.7 0.23 4.9E-06 44.8 9.3 81 202-283 5-90 (245)
409 TIGR01963 PHB_DH 3-hydroxybuty 94.7 0.2 4.3E-06 45.5 9.0 80 203-283 1-88 (255)
410 PRK00121 trmB tRNA (guanine-N( 94.6 0.22 4.8E-06 44.2 8.9 96 202-305 40-156 (202)
411 PRK14194 bifunctional 5,10-met 94.6 0.31 6.7E-06 45.9 10.1 94 182-307 138-233 (301)
412 TIGR00446 nop2p NOL1/NOP2/sun 94.6 0.91 2E-05 42.1 13.3 99 197-305 66-199 (264)
413 PF02558 ApbA: Ketopantoate re 94.6 0.078 1.7E-06 44.4 5.7 95 206-305 1-101 (151)
414 PRK06935 2-deoxy-D-gluconate 3 94.6 0.21 4.6E-06 45.6 9.1 80 202-283 14-101 (258)
415 PRK06141 ornithine cyclodeamin 94.6 0.28 6.2E-06 46.7 10.1 106 199-318 121-231 (314)
416 PRK07577 short chain dehydroge 94.6 0.15 3.3E-06 45.7 7.9 75 202-283 2-78 (234)
417 KOG1014 17 beta-hydroxysteroid 94.6 0.2 4.2E-06 47.0 8.5 78 201-283 47-136 (312)
418 PF13823 ADH_N_assoc: Alcohol 94.6 0.033 7.1E-07 31.0 2.1 22 16-38 1-22 (23)
419 PRK05597 molybdopterin biosynt 94.6 0.22 4.8E-06 48.3 9.4 36 202-237 27-62 (355)
420 PRK06463 fabG 3-ketoacyl-(acyl 94.5 0.23 5.1E-06 45.3 9.2 79 202-283 6-89 (255)
421 PF02670 DXP_reductoisom: 1-de 94.5 0.21 4.6E-06 41.0 7.7 95 206-302 1-118 (129)
422 PRK07102 short chain dehydroge 94.5 0.29 6.2E-06 44.3 9.7 78 204-283 2-86 (243)
423 TIGR00452 methyltransferase, p 94.5 0.19 4.1E-06 47.8 8.6 101 191-304 110-224 (314)
424 PRK13243 glyoxylate reductase; 94.5 0.25 5.4E-06 47.5 9.5 37 202-239 149-185 (333)
425 PF08241 Methyltransf_11: Meth 94.4 0.12 2.7E-06 38.8 5.9 85 208-303 2-95 (95)
426 PRK07775 short chain dehydroge 94.4 0.26 5.7E-06 45.6 9.2 81 202-283 9-97 (274)
427 TIGR01505 tartro_sem_red 2-hyd 94.4 0.37 8.1E-06 45.2 10.3 43 205-248 1-43 (291)
428 KOG1201 Hydroxysteroid 17-beta 94.3 0.26 5.6E-06 46.0 8.8 79 202-283 37-124 (300)
429 PRK12335 tellurite resistance 94.3 0.12 2.5E-06 48.7 6.7 90 202-304 120-222 (287)
430 PRK08303 short chain dehydroge 94.3 0.27 5.8E-06 46.6 9.3 34 202-236 7-41 (305)
431 PRK08945 putative oxoacyl-(acy 94.3 0.32 7E-06 44.1 9.5 83 200-283 9-102 (247)
432 PRK07097 gluconate 5-dehydroge 94.3 0.3 6.6E-06 44.8 9.4 81 202-283 9-97 (265)
433 PLN02928 oxidoreductase family 94.3 0.25 5.5E-06 47.7 9.1 35 202-237 158-192 (347)
434 PRK06997 enoyl-(acyl carrier p 94.3 0.27 5.7E-06 45.3 8.9 81 202-283 5-94 (260)
435 PLN02490 MPBQ/MSBQ methyltrans 94.3 0.28 6E-06 47.2 9.2 94 201-306 112-216 (340)
436 PLN02256 arogenate dehydrogena 94.3 0.41 8.9E-06 45.4 10.3 97 194-306 27-128 (304)
437 KOG0725 Reductases with broad 94.3 0.22 4.8E-06 46.4 8.4 80 201-283 6-99 (270)
438 PRK14903 16S rRNA methyltransf 94.2 0.61 1.3E-05 46.5 11.9 102 196-306 231-367 (431)
439 PRK08300 acetaldehyde dehydrog 94.2 0.53 1.1E-05 44.4 10.8 92 204-304 5-100 (302)
440 PLN02589 caffeoyl-CoA O-methyl 94.2 0.56 1.2E-05 43.0 10.8 109 196-309 73-194 (247)
441 PRK05600 thiamine biosynthesis 94.2 0.34 7.3E-06 47.3 9.8 35 202-236 40-74 (370)
442 PRK14968 putative methyltransf 94.2 0.53 1.1E-05 40.6 10.3 43 199-244 20-62 (188)
443 PRK08063 enoyl-(acyl carrier p 94.2 0.3 6.4E-06 44.3 9.0 81 202-283 3-92 (250)
444 PRK06523 short chain dehydroge 94.2 0.21 4.5E-06 45.7 8.0 75 202-282 8-86 (260)
445 PRK05447 1-deoxy-D-xylulose 5- 94.2 0.34 7.4E-06 47.2 9.6 99 204-304 2-121 (385)
446 PRK10258 biotin biosynthesis p 94.2 0.42 9.1E-06 43.7 10.0 99 196-306 36-141 (251)
447 PLN00141 Tic62-NAD(P)-related 94.2 0.29 6.2E-06 44.7 8.9 100 202-306 16-132 (251)
448 PRK00216 ubiE ubiquinone/menaq 94.1 0.3 6.6E-06 43.9 8.9 102 195-306 44-159 (239)
449 PRK14618 NAD(P)H-dependent gly 94.1 0.5 1.1E-05 45.2 10.7 95 204-306 5-105 (328)
450 PRK14188 bifunctional 5,10-met 94.1 0.5 1.1E-05 44.5 10.4 93 182-307 137-232 (296)
451 COG0569 TrkA K+ transport syst 94.1 0.41 8.9E-06 43.3 9.5 75 205-285 2-78 (225)
452 PRK05562 precorrin-2 dehydroge 94.1 2.2 4.9E-05 38.4 14.1 93 202-306 24-117 (223)
453 PRK14904 16S rRNA methyltransf 94.1 0.53 1.2E-05 47.2 11.2 100 196-306 244-378 (445)
454 PF01408 GFO_IDH_MocA: Oxidore 94.1 1.1 2.5E-05 35.5 11.2 88 205-306 2-93 (120)
455 PF05724 TPMT: Thiopurine S-me 94.1 0.099 2.1E-06 47.1 5.4 102 196-305 31-155 (218)
456 TIGR03215 ac_ald_DH_ac acetald 94.1 0.49 1.1E-05 44.3 10.2 86 205-302 3-92 (285)
457 PRK01438 murD UDP-N-acetylmura 94.1 0.33 7.2E-06 49.0 9.9 72 201-285 14-90 (480)
458 PRK11559 garR tartronate semia 94.1 0.61 1.3E-05 43.9 11.1 43 205-248 4-46 (296)
459 PRK07792 fabG 3-ketoacyl-(acyl 94.0 0.42 9.1E-06 45.2 10.0 81 202-283 11-99 (306)
460 PRK15451 tRNA cmo(5)U34 methyl 94.0 0.19 4E-06 46.1 7.3 94 200-306 54-165 (247)
461 PLN02336 phosphoethanolamine N 94.0 0.27 5.8E-06 49.6 9.1 100 195-305 259-369 (475)
462 PRK05650 short chain dehydroge 94.0 0.31 6.8E-06 44.9 8.9 78 205-283 2-87 (270)
463 PRK07819 3-hydroxybutyryl-CoA 94.0 1.5 3.3E-05 41.1 13.6 38 204-242 6-43 (286)
464 PRK07791 short chain dehydroge 94.0 0.42 9.1E-06 44.7 9.8 82 201-283 4-102 (286)
465 PRK08223 hypothetical protein; 94.0 0.21 4.6E-06 46.7 7.6 36 202-237 26-61 (287)
466 PRK12743 oxidoreductase; Provi 94.0 0.36 7.8E-06 44.1 9.1 80 203-283 2-90 (256)
467 PRK06849 hypothetical protein; 94.0 0.48 1E-05 46.4 10.5 98 202-302 3-104 (389)
468 PLN00016 RNA-binding protein; 93.9 0.5 1.1E-05 46.1 10.6 96 202-306 51-165 (378)
469 PRK14902 16S rRNA methyltransf 93.9 0.5 1.1E-05 47.3 10.8 100 196-304 244-378 (444)
470 PRK14191 bifunctional 5,10-met 93.9 0.54 1.2E-05 44.0 10.1 94 182-307 136-231 (285)
471 KOG1252 Cystathionine beta-syn 93.9 0.61 1.3E-05 44.2 10.3 59 195-254 95-157 (362)
472 PRK05565 fabG 3-ketoacyl-(acyl 93.9 0.37 8E-06 43.4 9.0 80 203-283 5-93 (247)
473 PLN02657 3,8-divinyl protochlo 93.9 0.38 8.2E-06 47.3 9.6 106 199-306 56-182 (390)
474 PTZ00146 fibrillarin; Provisio 93.9 0.62 1.3E-05 43.7 10.4 102 195-304 125-236 (293)
475 PRK10669 putative cation:proto 93.8 0.43 9.4E-06 49.3 10.3 94 204-304 418-514 (558)
476 PRK12480 D-lactate dehydrogena 93.8 0.67 1.5E-05 44.5 10.9 37 202-239 145-181 (330)
477 PRK14901 16S rRNA methyltransf 93.7 0.83 1.8E-05 45.6 11.8 103 196-304 246-383 (434)
478 PLN02520 bifunctional 3-dehydr 93.7 0.25 5.5E-06 50.6 8.3 93 202-306 378-476 (529)
479 PRK08416 7-alpha-hydroxysteroi 93.7 0.46 9.9E-06 43.6 9.3 80 202-282 7-96 (260)
480 cd01485 E1-1_like Ubiquitin ac 93.7 0.74 1.6E-05 40.7 10.3 34 203-236 19-52 (198)
481 PRK06171 sorbitol-6-phosphate 93.7 0.21 4.6E-06 45.8 7.1 75 202-282 8-86 (266)
482 PRK05855 short chain dehydroge 93.7 0.33 7.1E-06 49.8 9.2 81 202-283 314-402 (582)
483 PF05368 NmrA: NmrA-like famil 93.7 0.46 1E-05 42.8 9.2 84 206-296 1-92 (233)
484 PRK15068 tRNA mo(5)U34 methylt 93.7 1.2 2.6E-05 42.6 12.3 97 195-304 115-225 (322)
485 TIGR02632 RhaD_aldol-ADH rhamn 93.6 0.34 7.4E-06 51.2 9.3 81 202-283 413-503 (676)
486 PRK10901 16S rRNA methyltransf 93.6 1 2.2E-05 44.9 12.3 101 196-305 238-372 (427)
487 PRK03562 glutathione-regulated 93.6 0.48 1E-05 49.6 10.3 77 203-285 400-476 (621)
488 PRK00258 aroE shikimate 5-dehy 93.6 0.2 4.3E-06 46.9 6.8 96 201-306 121-222 (278)
489 PF05185 PRMT5: PRMT5 arginine 93.6 0.31 6.6E-06 48.8 8.4 133 156-302 132-294 (448)
490 PRK06436 glycerate dehydrogena 93.6 0.34 7.4E-06 45.9 8.4 35 202-237 121-155 (303)
491 PRK08278 short chain dehydroge 93.6 0.4 8.6E-06 44.4 8.8 36 202-238 5-41 (273)
492 PRK06522 2-dehydropantoate 2-r 93.6 0.28 6.1E-06 46.1 7.9 92 205-304 2-99 (304)
493 PRK13403 ketol-acid reductoiso 93.6 0.79 1.7E-05 43.7 10.6 87 201-303 14-104 (335)
494 TIGR02992 ectoine_eutC ectoine 93.6 0.79 1.7E-05 43.9 10.9 95 201-308 127-227 (326)
495 cd05212 NAD_bind_m-THF_DH_Cycl 93.5 0.81 1.8E-05 38.1 9.5 94 182-307 7-102 (140)
496 PRK06153 hypothetical protein; 93.5 0.27 5.9E-06 47.8 7.6 35 202-236 175-209 (393)
497 PLN02396 hexaprenyldihydroxybe 93.5 0.31 6.8E-06 46.5 8.0 97 200-305 129-235 (322)
498 PRK07066 3-hydroxybutyryl-CoA 93.5 1.2 2.6E-05 42.6 11.9 39 204-243 8-46 (321)
499 COG4106 Tam Trans-aconitate me 93.5 0.46 1E-05 42.3 8.2 98 194-302 22-126 (257)
500 PRK03612 spermidine synthase; 93.5 0.46 1E-05 48.6 9.7 96 201-305 296-415 (521)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.8e-63 Score=463.95 Aligned_cols=320 Identities=31% Similarity=0.452 Sum_probs=297.5
Q ss_pred ccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335 13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 13 ~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
+++|||+++.++++++++++++.|+|+++||+|||+|+|+|++|++.++|.++.. .+|.++|||.+|+|+++|++|++
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~--~~P~ipGHEivG~V~~vG~~V~~ 78 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP--KLPLIPGHEIVGTVVEVGEGVTG 78 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC--CCCccCCcceEEEEEEecCCCcc
Confidence 5789999999999999999999999999999999999999999999999999888 79999999999999999999999
Q ss_pred cCCCCEEEe-eCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335 93 VKERDLVLP-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (373)
Q Consensus 93 ~~~Gd~V~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l 171 (373)
|++||||.+ ....+|+.|++|++|++++|+++.. .|++.+| +|+||+++|+++++++
T Consensus 79 ~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~i 136 (339)
T COG1064 79 LKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKI 136 (339)
T ss_pred CCCCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEEC
Confidence 999999999 8889999999999999999999776 8888988 9999999999999999
Q ss_pred CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
|++++++.||.+.|+..|.|+++ +..+++||++|+|.|.|++|++++|+||++|+ +|++++++++|++.++++||+++
T Consensus 137 P~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~ 214 (339)
T COG1064 137 PEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHV 214 (339)
T ss_pred CCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEE
Confidence 99999999999999999999975 66999999999999999999999999999998 99999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (373)
++.++ +++.+.+.+. +|+++|+++ +.+++.++++|+++ |+++++|........+++...+.. +++|.||.
T Consensus 215 i~~~~---~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~ 285 (339)
T COG1064 215 INSSD---SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSL 285 (339)
T ss_pred EEcCC---chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEe
Confidence 99876 6777777653 999999999 78899999999997 999999986423345577777776 99999999
Q ss_pred cCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccccc
Q 017335 331 FGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGLL 370 (373)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~l 370 (373)
.++ +.++++++++..+|++.+ +.++++++++|++.|.
T Consensus 286 ~g~---~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~ 325 (339)
T COG1064 286 VGT---RADLEEALDFAAEGKIKPEILETIPLDEINEAYERME 325 (339)
T ss_pred cCC---HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHH
Confidence 888 789999999999999997 4899999999998875
No 2
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=8.1e-63 Score=451.55 Aligned_cols=348 Identities=43% Similarity=0.739 Sum_probs=333.6
Q ss_pred cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|++||++..++++||+++++.+++|++||||||+.|+|+||+|...+.|..+. .+|.++|||++|+|++||+.|+++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~---~~P~vLGHEgAGiVe~VG~gVt~v 77 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE---GFPAVLGHEGAGIVEAVGEGVTSV 77 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC---CCceecccccccEEEEecCCcccc
Confidence 57899999999999999999999999999999999999999999999998877 499999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
+|||+|+..+.-+|+.|.+|++|.+++|.....+-..|...||..++. .++.++.|+++.++|++|.++++.+++++++
T Consensus 78 kpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~ 156 (366)
T COG1062 78 KPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDP 156 (366)
T ss_pred CCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCC
Confidence 999999999999999999999999999999888877888899999998 8999999999999999999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
..+++.++++-|.+.|.+.++.+.+++++|++|.|.|.|++|++++|-|+..|+++||+++.+++|+++++++||++++|
T Consensus 157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn 236 (366)
T COG1062 157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVN 236 (366)
T ss_pred CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCc-cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecC
Q 017335 254 PATCGDK-TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 332 (373)
Q Consensus 254 ~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~ 332 (373)
+++ . ++.+.+.++|++++|++|||+|....+.++++++.+ ||+.+.+|....+..++++..+|..+.+++|+.+|
T Consensus 237 ~~~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G 312 (366)
T COG1062 237 PKE---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFG 312 (366)
T ss_pred chh---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeec
Confidence 997 4 699999999999999999999999999999999999 59999999998888999999998889999999999
Q ss_pred CCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 333 GLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 333 ~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
....+.+++++++++.+|+++. ++++|+++|+||..+
T Consensus 313 ~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m 354 (366)
T COG1062 313 GARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLM 354 (366)
T ss_pred CCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHH
Confidence 9999999999999999999996 678899999999765
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-61 Score=436.88 Aligned_cols=356 Identities=54% Similarity=0.893 Sum_probs=336.9
Q ss_pred CCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (373)
Q Consensus 10 ~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (373)
+.++.+|||++..++++||.++|+.+++|+.+||+||+.++++||+|...++|..+.. -+|.++|||++|+|+++|..
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~--~fP~IlGHEaaGIVESvGeg 79 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEG--LFPVILGHEAAGIVESVGEG 79 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccc--cCceEecccceeEEEEecCC
Confidence 4578999999999999999999999999999999999999999999999999987655 79999999999999999999
Q ss_pred CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCC-CCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (373)
Q Consensus 90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 168 (373)
|+++++||+|+..+.-.|+.|.+|+++..|+|.+...... .++..||..||- .+|.+++||.+.++|+||.+++...+
T Consensus 80 V~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v 158 (375)
T KOG0022|consen 80 VTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISV 158 (375)
T ss_pred ccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeeccee
Confidence 9999999999999999999999999999999999888743 555569999998 88889999999999999999999999
Q ss_pred EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (373)
Q Consensus 169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 248 (373)
.+|++..+++.++++.|.+.|+|.|+++.+.++||++|.|.|.|++|+++++-||+.|+++||++|.+++|.+.++++|+
T Consensus 159 ~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGa 238 (375)
T KOG0022|consen 159 AKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGA 238 (375)
T ss_pred EecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEE
Q 017335 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCG 328 (373)
Q Consensus 249 ~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g 328 (373)
++.+|+.+ ..+.+.+.+.++|++++|+-|||+|...++.+++.+...|||+-+.+|....++.+++.+++++.+.++.|
T Consensus 239 Te~iNp~d-~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~G 317 (375)
T KOG0022|consen 239 TEFINPKD-LKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKG 317 (375)
T ss_pred ceecChhh-ccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEE
Confidence 99999985 33468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 329 TYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
+.+|.++.+.+++.+++.+.+++++. +.+|++++++||+.|
T Consensus 318 s~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll 363 (375)
T KOG0022|consen 318 SAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLL 363 (375)
T ss_pred EecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHH
Confidence 99999999999999999999999986 777788889998765
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-56 Score=406.54 Aligned_cols=321 Identities=24% Similarity=0.369 Sum_probs=279.5
Q ss_pred ccceeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCC-CCCCccccCcccEEEEEeCCCC
Q 017335 13 VIRCKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYV 90 (373)
Q Consensus 13 ~~~~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v 90 (373)
..+|+|+++.++++ +++++.|.|++ .|+||+|++.++|||+||++.+........ ...|.++|||.+|+|+++|++|
T Consensus 2 ~~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~V 80 (354)
T KOG0024|consen 2 AADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEV 80 (354)
T ss_pred CcccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccc
Confidence 35799999999998 99999999986 999999999999999999999986654331 3589999999999999999999
Q ss_pred CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (373)
Q Consensus 91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 170 (373)
+++++||||++.+..+|++|+.|++|++|+|++..+. .....+| ++++|+..+++++++
T Consensus 81 k~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~--atpp~~G-------------------~la~y~~~~~dfc~K 139 (354)
T KOG0024|consen 81 KHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC--ATPPVDG-------------------TLAEYYVHPADFCYK 139 (354)
T ss_pred cccccCCeEEecCCCccccchhhhCcccccCCccccc--cCCCcCC-------------------ceEEEEEechHheee
Confidence 9999999999999999999999999999999999983 3445667 999999999999999
Q ss_pred cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (373)
Q Consensus 171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~ 250 (373)
|||+++++++|++. +++++|+| .+++.+++|++|||+|+|++|+++...||++|+++|++++..++|++.++++|++.
T Consensus 140 LPd~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~ 217 (354)
T KOG0024|consen 140 LPDNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATV 217 (354)
T ss_pred CCCCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeE
Confidence 99999999999999 89999996 58899999999999999999999999999999999999999999999999999998
Q ss_pred EEcCCCCC-CccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEE
Q 017335 251 FINPATCG-DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVC 327 (373)
Q Consensus 251 vi~~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~ 327 (373)
+.+..... .+++.+.+....+. .+|+.|||+|...+++.++.+++.+ |++++.|.. ....+|+..+... +++++
T Consensus 218 ~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g--~~~~~fpi~~v~~kE~~~~ 294 (354)
T KOG0024|consen 218 TDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMG--AEEIQFPIIDVALKEVDLR 294 (354)
T ss_pred EeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccC--CCccccChhhhhhheeeee
Confidence 88776621 12333444444443 5999999999999999999999997 999999863 3466888888777 99999
Q ss_pred EeecCCCCchhHHHHHHHHHHcCCCCCCcccccCCC
Q 017335 328 GTYFGGLKPRSDIATLAQKYLDKVHLRSSFHLCDPN 363 (373)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~ 363 (373)
|+.-.. ..+++.+++++.+|+++++.++++++.
T Consensus 295 g~fry~---~~~y~~ai~li~sGki~~k~lIT~r~~ 327 (354)
T KOG0024|consen 295 GSFRYC---NGDYPTAIELVSSGKIDVKPLITHRYK 327 (354)
T ss_pred eeeeec---cccHHHHHHHHHcCCcCchhheecccc
Confidence 996333 468999999999999997555544443
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-54 Score=393.23 Aligned_cols=335 Identities=25% Similarity=0.370 Sum_probs=296.8
Q ss_pred CCCCCcccceeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEE
Q 017335 7 SPKAGKVIRCKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVE 84 (373)
Q Consensus 7 ~~~~~~~~~~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~ 84 (373)
|++...|.+++++.++.++. ++++.+++.|+|+++||+|||+++|||++|++.++|.++.. .+|.++|||.+|+|+
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s--~~PlV~GHEiaG~Vv 78 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLS--KYPLVPGHEIAGVVV 78 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcc--cCCccCCceeeEEEE
Confidence 35566789999999999877 46779999999999999999999999999999999999887 899999999999999
Q ss_pred EeCCCCCccCCCCEEEe-eCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEe
Q 017335 85 SVGEYVEEVKERDLVLP-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVV 163 (373)
Q Consensus 85 ~vG~~v~~~~~Gd~V~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v 163 (373)
++|++|+.|++||||-+ ....+|+.|++|+++++++|++.-.+ ..|+..|| .-++|+|++|+++
T Consensus 79 kvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DG--------------t~~~ggf~~~~~v 143 (360)
T KOG0023|consen 79 KVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT-YNGVYHDG--------------TITQGGFQEYAVV 143 (360)
T ss_pred EECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEe-ccccccCC--------------CCccCccceeEEE
Confidence 99999999999999954 44688999999999999999964443 36777777 2345789999999
Q ss_pred eccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHH
Q 017335 164 DITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEI 242 (373)
Q Consensus 164 ~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~ 242 (373)
++.++++||++++.+.||.+.|+..|.|+.| ...++.||++|.|.|+|++|.+++|+||++|. +|+++++++ .|.+.
T Consensus 144 ~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea 221 (360)
T KOG0023|consen 144 DEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEA 221 (360)
T ss_pred eeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHH
Confidence 9999999999999999999999999999965 77889999999999997799999999999999 999999988 55666
Q ss_pred HHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh
Q 017335 243 GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK 322 (373)
Q Consensus 243 ~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~ 322 (373)
++.|||+..++..+ ++++.+++.+.+++++|-|.+- ....++.++.+++.+ |++|++|.+.. ++.++.+.+..
T Consensus 222 ~~~LGAd~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil 294 (360)
T KOG0023|consen 222 IKSLGADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLIL 294 (360)
T ss_pred HHhcCcceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhc
Confidence 67799999998873 3899999999888778877766 445589999999997 99999998543 78888888887
Q ss_pred -CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccccc
Q 017335 323 -GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGLL 370 (373)
Q Consensus 323 -~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~l 370 (373)
.++|.||.+|. +.+.++++++..+|.+.. +..+++++++|++++.
T Consensus 295 ~~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~IE~v~~~~v~~a~erm~ 342 (360)
T KOG0023|consen 295 GRKSIKGSIVGS---RKETQEALDFVARGLIKSPIELVKLSEVNEAYERME 342 (360)
T ss_pred ccEEEEeecccc---HHHHHHHHHHHHcCCCcCceEEEehhHHHHHHHHHH
Confidence 89999999999 789999999999999986 8999999999998764
No 6
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.8e-51 Score=401.95 Aligned_cols=360 Identities=53% Similarity=0.888 Sum_probs=293.9
Q ss_pred CCCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335 8 PKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (373)
Q Consensus 8 ~~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (373)
.++.+|++|||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|..+... .+|.++|||++|+|+++|
T Consensus 3 ~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~-~~p~i~GhE~~G~V~~vG 81 (381)
T PLN02740 3 ETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQR-AYPRILGHEAAGIVESVG 81 (381)
T ss_pred cccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccC-CCCccccccceEEEEEeC
Confidence 4456889999999999987789999999999999999999999999999999988753221 578999999999999999
Q ss_pred CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCC-CCCCCCCcccccc-CCceecccccccceeeeEEeec
Q 017335 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRP-NMPRDGTSRFREL-KGDVIHHFLNISSFTEYSVVDI 165 (373)
Q Consensus 88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~-g~~~~G~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~ 165 (373)
+++++|++||||++.+...|+.|++|+.|.++.|++....... ....+|..++... .+....+++..|+|+||+.+|.
T Consensus 82 ~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~ 161 (381)
T PLN02740 82 EGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDS 161 (381)
T ss_pred CCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEeh
Confidence 9999999999999999999999999999999999886532100 0000110000000 0000011122469999999999
Q ss_pred cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (373)
Q Consensus 166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~ 245 (373)
+.++++|+++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++.+++
T Consensus 162 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~ 241 (381)
T PLN02740 162 ACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241 (381)
T ss_pred HHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH
Confidence 99999999999999999999999999988788899999999999999999999999999998669999999999999999
Q ss_pred cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcE
Q 017335 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRS 325 (373)
Q Consensus 246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~ 325 (373)
+|++++++.++ .+.++.+.+.+++++++|++||++|...++..++.++++++|+++.+|.......++++...++++++
T Consensus 242 ~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~ 320 (381)
T PLN02740 242 MGITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRS 320 (381)
T ss_pred cCCcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCe
Confidence 99999998765 11247778888876689999999998877999999998823999999985443335566555556899
Q ss_pred EEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
+.|+..+.+....++.++++++.+|++++ +.|+++++++|++.+
T Consensus 321 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~ 369 (381)
T PLN02740 321 ITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLL 369 (381)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHH
Confidence 99998777665678999999999999864 779999999988654
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=5.7e-51 Score=397.07 Aligned_cols=346 Identities=36% Similarity=0.633 Sum_probs=290.0
Q ss_pred eeeEEeecCC--------CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335 16 CKAAICRIPG--------KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (373)
Q Consensus 16 ~ka~~~~~~~--------~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (373)
|||+++.+.| +.++++++|.|+|+++||+|||.++|||++|++.+.|..+. .+|.++|||++|+|+++|
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~---~~p~i~GhE~~G~V~~vG 77 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR---PLPMALGHEAAGVVVEVG 77 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC---CCCccCCccceeEEEEeC
Confidence 7999999865 33899999999999999999999999999999999887542 578999999999999999
Q ss_pred CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (373)
Q Consensus 88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (373)
++++++++||||++.+...|+.|..|+.|.+++|.........|...+|...+....+. ..+..+.|+|+||+.+|++.
T Consensus 78 ~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~-~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 78 EGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGE-INHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcc-cccccCcccceeeEEecccc
Confidence 99999999999999888899999999999999998764321122222221010000000 00111235999999999999
Q ss_pred eEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (373)
Q Consensus 168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 247 (373)
++++|++++++++++++++++|||.++.+...++++++|||+|+|++|++++|+||.+|+++|+++++++++++.++++|
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~G 236 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELG 236 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcC
Confidence 99999999999999999999999998878889999999999999999999999999999967999999999999999999
Q ss_pred CceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEE
Q 017335 248 ITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV 326 (373)
Q Consensus 248 a~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i 326 (373)
+++++++.+ .++.+.+++.+++++|+||||+|....+..++++++++ |+++.+|.......++++...++. ++++
T Consensus 237 a~~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i 312 (371)
T cd08281 237 ATATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTL 312 (371)
T ss_pred CceEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEE
Confidence 999999887 78888888887768999999999877799999999997 999999975433345677777776 9999
Q ss_pred EEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 327 CGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
+|+..+.+...++++++++++++|++++ +.|+++++++|++.+
T Consensus 313 ~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~ 360 (371)
T cd08281 313 KGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRL 360 (371)
T ss_pred EEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHH
Confidence 9998776555678999999999999974 678999999988754
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.6e-50 Score=391.97 Aligned_cols=350 Identities=43% Similarity=0.769 Sum_probs=287.4
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++..++++++++++|.|+|+++||+|||.++|||++|++.+.|..+.. .+|.++|||++|+|+++|+++++|++
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~ 79 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEG--VFPVILGHEGAGIVEAVGEGVTSVKV 79 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCC--CCCeeeccccEEEEEEECCCCccCCC
Confidence 8999999888779999999999999999999999999999999998876544 67899999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||||++.+...|+.|.+|+.|.+++|.+.......|+..+|..++.. +|....+..+.|+|+||+.+|++.++++|+++
T Consensus 80 GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 80 GDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSK-DGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCcccccc-CCCcccccccCccceeeEEechhheEECCCCC
Confidence 99999998899999999999999999875432223333333211111 01000111224699999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~ 255 (373)
++++++++++++.|||+++.+...+++|++|||+|+|++|++++|+||.+|+++|+++++++++++.++++|++++++..
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~ 238 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN 238 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence 99999999999999999887888999999999999999999999999999986799999999999999999999999876
Q ss_pred CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCCC
Q 017335 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK 335 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 335 (373)
+ .+.++.+.+.+++++++|++|||+|.+.++..+++++++++|+++.+|.......+++....++.+..+.|+..+...
T Consensus 239 ~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 317 (368)
T TIGR02818 239 D-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVK 317 (368)
T ss_pred c-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCC
Confidence 3 124566778777777899999999987779999999987229999999854333445555555555567887665544
Q ss_pred chhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 336 PRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 336 ~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
.+.++.++++++++|++++ +.|+++++.+|++.+
T Consensus 318 ~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~ 356 (368)
T TIGR02818 318 GRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLM 356 (368)
T ss_pred cHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHH
Confidence 4678999999999999863 789999998888654
No 9
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=5.2e-50 Score=389.94 Aligned_cols=352 Identities=49% Similarity=0.820 Sum_probs=291.0
Q ss_pred cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
.+|||+++..++++++++++|.|.|+++||+|||.++|||++|++.+.|..+.. .+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~ 78 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG--LFPVILGHEGAGIVESVGEGVTSV 78 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC--CCCceeccceeEEEEEeCCCCccC
Confidence 369999999887779999999999999999999999999999999998876544 689999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||||++.+...|+.|.+|+.++++.|.+.......|...+|..++... |....+..+.|+|+||+.++++.++++|+
T Consensus 79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~-g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 157 (368)
T cd08300 79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCK-GKPIYHFMGTSTFSEYTVVAEISVAKINP 157 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccC-CcccccccccccceeEEEEchhceEeCCC
Confidence 99999999999999999999999999998754321123333332111111 11111122346999999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++|+||.+|+++|+++++++++++.++++|++++++
T Consensus 158 ~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~ 237 (368)
T cd08300 158 EAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVN 237 (368)
T ss_pred CCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEc
Confidence 99999999999999999998878889999999999999999999999999999967999999999999999999999998
Q ss_pred CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCC
Q 017335 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (373)
+++ .++++.+.+.+++++++|+|||++|+...+..+++++++++|+++.+|.......++++...+..+.++.++..+.
T Consensus 238 ~~~-~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 316 (368)
T cd08300 238 PKD-HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGG 316 (368)
T ss_pred ccc-cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecc
Confidence 875 1125778888887778999999999877799999999873399999997543333455555555566778877766
Q ss_pred CCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
+..++++.++++++++|++++ +.|+++++.+|++.+
T Consensus 317 ~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~ 357 (368)
T cd08300 317 WKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLM 357 (368)
T ss_pred cCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHH
Confidence 666788999999999999974 789999999988754
No 10
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=7.9e-50 Score=388.74 Aligned_cols=352 Identities=53% Similarity=0.891 Sum_probs=291.5
Q ss_pred cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
++|||+++.+++++++++++|.|+|+++||+|||.+++||++|++.+.|..+.. .+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~ 78 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTP--LFPRILGHEAAGIVESVGEGVTDL 78 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCC--CCCcccccccceEEEEeCCCCCcc
Confidence 489999999887779999999999999999999999999999999998876544 678999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~-~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
++||||++.+..+|+.|.+|+.|+++.|.+.......|... ++...+.. .|....++...|+|+||+.+|+..++++|
T Consensus 79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~-~g~~~~~~~~~G~~aey~~v~~~~~~~iP 157 (369)
T cd08301 79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSI-NGKPIYHFVGTSTFSEYTVVHVGCVAKIN 157 (369)
T ss_pred ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCcccccc-CCcceeeeeccccceeEEEEecccEEECC
Confidence 99999999999999999999999999998854321122211 00000000 00011112233689999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
+++++++++++++.+.|||.++.+...+++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|+++++
T Consensus 158 ~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i 237 (369)
T cd08301 158 PEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFV 237 (369)
T ss_pred CCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence 99999999999999999999888888999999999999999999999999999986799999999999999999999999
Q ss_pred cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhcc-CCceEEEEcccCCCCccccCHHHHhhCcEEEEeec
Q 017335 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE-GWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 331 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~-~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (373)
++.+ ...++.+.+++++++++|++||++|....+..+++++++ + |+++.+|.......++++...+++++++.|+..
T Consensus 238 ~~~~-~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 315 (369)
T cd08301 238 NPKD-HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLF 315 (369)
T ss_pred cccc-cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcCCCCcccccCHHHHhcCCeEEEEec
Confidence 8764 113466777777766899999999988778999999999 4 999999986543455666655556999999987
Q ss_pred CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccccc
Q 017335 332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGLL 370 (373)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~l 370 (373)
+.+..+++++++++++.+|++++ +.|+++++++|+..+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~ 359 (369)
T cd08301 316 GGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLL 359 (369)
T ss_pred CCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHH
Confidence 77665678999999999998864 6789999999887553
No 11
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=5.2e-50 Score=388.51 Aligned_cols=338 Identities=31% Similarity=0.540 Sum_probs=287.2
Q ss_pred ceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 15 ~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|..+. .+|.++|||++|+|+++|+++++|+
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~---~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND---EFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc---cCCcccccceEEEEEEeCCCCcccC
Confidence 6999999999888999999999999999999999999999999998886432 5789999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCC-CCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY-RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
+||||++.+...|+.|.+|..|++++|....... ..++ .+| ...+..+..|+|+||+.+|++.++++|+
T Consensus 78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-~~g---------~~~~~~~~~G~~aey~~v~~~~~~~ip~ 147 (358)
T TIGR03451 78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-TDG---------TELSPALGIGAFAEKTLVHAGQCTKVDP 147 (358)
T ss_pred CCCEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-ccC---------cccccccccccccceEEEehhheEECCC
Confidence 9999999999999999999999999997532110 0000 011 0000111235999999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
++++++++++++.+.++|.++.+...+++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++++++
T Consensus 148 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~ 227 (358)
T TIGR03451 148 AADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVN 227 (358)
T ss_pred CCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 99999999999999999988778888999999999999999999999999999966999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF 331 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 331 (373)
+++ .++.+.+.+.+++ ++|+||||+|++.++..++++++++ |+++.+|........+++...++. ++++.++..
T Consensus 228 ~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~ 303 (358)
T TIGR03451 228 SSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWY 303 (358)
T ss_pred CCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeec
Confidence 877 7888888888877 8999999999877799999999997 999999985432345677766666 899998866
Q ss_pred CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
+.....++++++++++++|++++ +.|+++++.+|++.+
T Consensus 304 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~ 346 (358)
T TIGR03451 304 GDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKM 346 (358)
T ss_pred CCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHH
Confidence 54444678999999999999964 678999999888654
No 12
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=6.1e-49 Score=377.94 Aligned_cols=320 Identities=28% Similarity=0.436 Sum_probs=277.0
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++.+++. ++++++|.|.|+++||+|||.+++||++|++.+.+.+.... .+|.++|||++|+|+++|++|+++++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~~ 78 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPA-YQGVIPGHEPAGVVVAVGPGVTHFRV 78 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccC-CCCceeccCceEEEEEECCCCccCCC
Confidence 79999998776 99999999999999999999999999999998876643221 46789999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||+|++.+...|+.|+.|+.|++++|.+... ..|...+| +|+||+.+|.+.++++|+++
T Consensus 79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~ 137 (339)
T cd08239 79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDL 137 (339)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCC
Confidence 9999999999999999999999999987653 24555556 99999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~ 255 (373)
++++++.+++++.|||+++ +...+++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++++++++
T Consensus 138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~ 216 (339)
T cd08239 138 SFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSG 216 (339)
T ss_pred CHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999976 567899999999999999999999999999994499999999999999999999999987
Q ss_pred CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG 333 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 333 (373)
+ .+ .+.+.+.+++ ++|+||||+|+...++.++++++++ |+++.+|.... ..+.. ...++. +++++|+..+.
T Consensus 217 ~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~-~~~~~~~~~~i~g~~~~~ 289 (339)
T cd08239 217 Q---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEV-SNDLIRKQRTLIGSWYFS 289 (339)
T ss_pred c---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCc-HHHHHhCCCEEEEEecCC
Confidence 6 55 6677777777 8999999999988778999999997 99999997433 22222 233444 89999987554
Q ss_pred CCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
.+++.++++++++|++++ +.|+++++++|++.+
T Consensus 290 ---~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~ 327 (339)
T cd08239 290 ---VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALF 327 (339)
T ss_pred ---HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHH
Confidence 578999999999999874 678899998888653
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.5e-48 Score=380.80 Aligned_cols=350 Identities=49% Similarity=0.850 Sum_probs=281.9
Q ss_pred CCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCC
Q 017335 10 AGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEY 89 (373)
Q Consensus 10 ~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~ 89 (373)
++....|||+++.++++.++++++|.|+|+++||+|||.++|||++|++.+.+.. .+|.++|||++|+|+++|++
T Consensus 7 ~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~ 81 (378)
T PLN02827 7 QPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEG 81 (378)
T ss_pred CcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCC
Confidence 4444789999999887669999999999999999999999999999999887642 36789999999999999999
Q ss_pred CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCC-CCCccccccCCceecccccccceeeeEEeeccce
Q 017335 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (373)
Q Consensus 90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~-~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 168 (373)
+++|++||||++.+...|+.|.+|++|.+++|++.... ..|... ++...|.. .|...-++...|+|+||+.+|++.+
T Consensus 82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~-~g~~~~~~~~~G~~aeyv~v~~~~~ 159 (378)
T PLN02827 82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSI-KGKPVYHYCAVSSFSEYTVVHSGCA 159 (378)
T ss_pred CcccCCCCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccc-cCcccccccccccceeeEEechhhe
Confidence 99999999999999899999999999999999874321 011100 00000000 0000000001359999999999999
Q ss_pred EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (373)
Q Consensus 169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 248 (373)
+++|+++++++++.+.+.+.++|.++.+..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.+.++++|+
T Consensus 160 ~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa 239 (378)
T PLN02827 160 VKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGV 239 (378)
T ss_pred EECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC
Confidence 99999999999999998999999877777889999999999999999999999999998668899999999999999999
Q ss_pred ceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCH-HHHh-hCcEE
Q 017335 249 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEIL-KGRSV 326 (373)
Q Consensus 249 ~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~-~~~~-~~~~i 326 (373)
++++++++ .+.++.+.+.+++++++|+|||++|....+..+++.+++++|+++.+|..... .+++. ..++ +++++
T Consensus 240 ~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~--~~~~~~~~~~~~~~~i 316 (378)
T PLN02827 240 TDFINPND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK--PEVSAHYGLFLSGRTL 316 (378)
T ss_pred cEEEcccc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC--ccccccHHHHhcCceE
Confidence 99998764 11357777777776689999999998777899999999932999999985432 23332 2344 49999
Q ss_pred EEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 327 CGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
.|+..+.+....++.++++++++|+|++ +.|+++++.+|++.+
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~ 364 (378)
T PLN02827 317 KGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELM 364 (378)
T ss_pred EeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHH
Confidence 9998776655678999999999999986 678899998887765
No 14
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=4.8e-48 Score=375.72 Aligned_cols=349 Identities=51% Similarity=0.874 Sum_probs=289.1
Q ss_pred cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
+.|||+++.+.+++++++++|.|.++++||+|||.++++|++|++.+.|..+ . .+|.++|||++|+|+++|++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-T--LFPVILGHEGAGIVESVGEGVTNL 77 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-C--CCCeecccceeEEEEeeCCCCccC
Confidence 4689999998877799999999999999999999999999999999988654 2 678999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|++.+...|+.|.+|+.|.+++|++..+. ..|+..+|...+.. .+....++.+.|+|+||+.++.+.++++|+
T Consensus 78 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~ 155 (365)
T cd08277 78 KPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFTC-KGKKIYHFLGTSTFSQYTVVDENYVAKIDP 155 (365)
T ss_pred CCCCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccccc-CCcccccccccccceeeEEEchhheEECCC
Confidence 9999999998999999999999999999986542 12333222111100 011111122346999999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++
T Consensus 156 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~ 235 (365)
T cd08277 156 AAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFIN 235 (365)
T ss_pred CCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEec
Confidence 99999999999999999998878889999999999999999999999999999867999999999999999999999998
Q ss_pred CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCC
Q 017335 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (373)
.++ .+.++.+.+.+++++++|+||||+|....+..+++++++++|+++.+|.... ...+++...++.++++.|+..+.
T Consensus 236 ~~~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~ 313 (365)
T cd08277 236 PKD-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGG 313 (365)
T ss_pred ccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCC
Confidence 765 1123566777777668999999999877789999999772299999998542 34466666666689999998877
Q ss_pred CCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
+..+.++.++++++++++++. +.|+++++++|++.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~ 354 (365)
T cd08277 314 FKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLM 354 (365)
T ss_pred CChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHH
Confidence 665678999999999998764 679999999988654
No 15
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=3.7e-48 Score=375.72 Aligned_cols=328 Identities=21% Similarity=0.323 Sum_probs=275.6
Q ss_pred CCCCCcccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEe
Q 017335 7 SPKAGKVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESV 86 (373)
Q Consensus 7 ~~~~~~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~v 86 (373)
+|++.-|++++++.+.+....+++.+++.|+|+++||+|||.++|||++|++.+.|..+.. .+|.++|||++|+|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~v 81 (360)
T PLN02586 4 SPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFT--RYPIVPGHEIVGIVTKL 81 (360)
T ss_pred ChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCC--CCCccCCcceeEEEEEE
Confidence 5777889999999998876669999999999999999999999999999999998765433 57899999999999999
Q ss_pred CCCCCccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCC----CCCCCCCCCccccccCCceecccccccceeeeE
Q 017335 87 GEYVEEVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYS 161 (373)
Q Consensus 87 G~~v~~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~ 161 (373)
|++|++|++||||++.+. ..|+.|.+|+.|.+++|++..... ..|...+| +|+||+
T Consensus 82 G~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G-------------------~~aey~ 142 (360)
T PLN02586 82 GKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYG-------------------GYSDMI 142 (360)
T ss_pred CCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCC-------------------ccceEE
Confidence 999999999999986654 479999999999999998754310 01223345 999999
Q ss_pred EeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH-H
Q 017335 162 VVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-F 240 (373)
Q Consensus 162 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~ 240 (373)
.+|++.++++|+++++++++.+++.+.|+|+++.+...+++|++|||.|+|++|++++|+||.+|+ +|++++.++++ .
T Consensus 143 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~ 221 (360)
T PLN02586 143 VVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKED 221 (360)
T ss_pred EEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhh
Confidence 999999999999999999999999999999977666667899999999999999999999999999 78887766665 4
Q ss_pred HHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH
Q 017335 241 EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 320 (373)
Q Consensus 241 ~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~ 320 (373)
+.++++|+++++++++ . +.+.+.++ ++|+|||++|....++.++++++++ |+++.+|.... ..+++...+
T Consensus 222 ~~~~~~Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~ 291 (360)
T PLN02586 222 EAINRLGADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEK--PLELPIFPL 291 (360)
T ss_pred hHHHhCCCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCC--CCccCHHHH
Confidence 5567899999998765 2 23444443 6999999999877789999999997 99999997432 356677666
Q ss_pred hh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335 321 LK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL 369 (373)
Q Consensus 321 ~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~ 369 (373)
+. +..+.|+..+. ..+++++++++++|++++ +.|+++++++|++.+
T Consensus 292 ~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~~~~l~~~~~A~~~~ 340 (360)
T PLN02586 292 VLGRKLVGGSDIGG---IKETQEMLDFCAKHNITADIELIRMDEINTAMERL 340 (360)
T ss_pred HhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCcEEEEeHHHHHHHHHHH
Confidence 66 77888876554 578999999999999986 679999999998754
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=3.3e-48 Score=373.75 Aligned_cols=318 Identities=20% Similarity=0.342 Sum_probs=266.0
Q ss_pred cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhccc-CCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (373)
Q Consensus 12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (373)
|...+||+++.++++ +++++++.| ++++||||||.++|||++|++.+. |........+|.++|||++|+|+++ ++
T Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v 76 (343)
T PRK09880 1 MQVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DS 76 (343)
T ss_pred CcccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cC
Confidence 345689999999988 999999987 689999999999999999999875 4332211157899999999999999 67
Q ss_pred CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCC-----CCCCCccccccCCceecccccccceeeeEEeec
Q 017335 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-----PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (373)
Q Consensus 91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-----~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (373)
++|++||||++.+..+|+.|.+|+.|++++|++... .|. ..+| +|+||+.+|+
T Consensus 77 ~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~~~~~G-------------------~~aey~~v~~ 134 (343)
T PRK09880 77 SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYFPHVDG-------------------GFTRYKVVDT 134 (343)
T ss_pred ccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccccCCCCC-------------------ceeeeEEech
Confidence 899999999999999999999999999999988654 232 1244 9999999999
Q ss_pred cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (373)
Q Consensus 166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~ 245 (373)
+.++++|+++++++++.. .++++||+++ +.....++++|||+|+|++|++++|+|+.+|+++|+++++++++++.+++
T Consensus 135 ~~~~~~P~~l~~~~aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~ 212 (343)
T PRK09880 135 AQCIPYPEKADEKVMAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLARE 212 (343)
T ss_pred HHeEECCCCCCHHHHHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHH
Confidence 999999999999876644 4888999976 45566789999999999999999999999999779999999999999999
Q ss_pred cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR 324 (373)
Q Consensus 246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~ 324 (373)
+|+++++++++ .++.+ +... .+++|+||||+|.+.+++.++++++++ |+++.+|.... ..+++...++. ++
T Consensus 213 lGa~~vi~~~~---~~~~~-~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~ 284 (343)
T PRK09880 213 MGADKLVNPQN---DDLDH-YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEI 284 (343)
T ss_pred cCCcEEecCCc---ccHHH-Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCc
Confidence 99999999876 45433 2222 236999999999977799999999997 99999997433 34667777666 99
Q ss_pred EEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
++.|+... .++++++++++++|++++ +.|+++++++|++.+
T Consensus 285 ~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~ 330 (343)
T PRK09880 285 SLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFA 330 (343)
T ss_pred EEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHH
Confidence 99998532 367999999999999975 678999999888654
No 17
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=4.7e-48 Score=372.64 Aligned_cols=323 Identities=28% Similarity=0.369 Sum_probs=261.1
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCc-cccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV-IFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||++++..++...++++.+.|.+.++||+|||.++|||+||++.+++..+.. ..|. ++|||++|+|+++| .++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~--~~~~~i~GHE~~G~V~evG-~~~~~~ 77 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV--PPGDIILGHEFVGEVVEVG-VVRGFK 77 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC--CCCCcccCccceEEEEEec-cccCCC
Confidence 6788888877635577777777899999999999999999999999987665 4555 99999999999999 777899
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCC--CCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE-c
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG--YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK-I 171 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~--~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~-l 171 (373)
+||||++.+..+|+.|.+|+.|.+++|++.++. ...+...+| +|+||+.+|.+++++ +
T Consensus 78 ~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G-------------------~~aEyv~vp~~~~~~~~ 138 (350)
T COG1063 78 VGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG-------------------GFAEYVRVPADFNLAKL 138 (350)
T ss_pred CCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC-------------------ceEEEEEeccccCeecC
Confidence 999999999999999999999999999965431 011111445 999999999655555 5
Q ss_pred CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce
Q 017335 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD 250 (373)
Q Consensus 172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~ 250 (373)
|++++ .+++++..++.++|++.......+++++|+|+|+|++|++++++++.+|+++|++++.+++|++++++ .|++.
T Consensus 139 pd~~~-~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~ 217 (350)
T COG1063 139 PDGID-EEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADV 217 (350)
T ss_pred CCCCC-hhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeE
Confidence 88884 45555555999998864455556666699999999999999999999999999999999999999998 66776
Q ss_pred EEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335 251 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG 328 (373)
Q Consensus 251 vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g 328 (373)
+++... .+....+.+.+++ ++|++|||+|...+++.++++++++ |+++++|.+..... .++...++. ++++.|
T Consensus 218 ~~~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~g 292 (350)
T COG1063 218 VVNPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRG 292 (350)
T ss_pred eecCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEe
Confidence 776665 4677788888888 9999999999998999999999997 99999998654332 566666666 999999
Q ss_pred eecCCCCchhHHHHHHHHHHcCCCCCCc-----ccccCCCccccc
Q 017335 329 TYFGGLKPRSDIATLAQKYLDKVHLRSS-----FHLCDPNSDSAG 368 (373)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~-----~~~~~~~~a~~~ 368 (373)
+... ....+++++++++.+|+++++. +++++++++++.
T Consensus 293 s~~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~ 335 (350)
T COG1063 293 SLRP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYEL 335 (350)
T ss_pred ccCC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHH
Confidence 9421 1246899999999999999753 344555555543
No 18
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=3.6e-47 Score=362.31 Aligned_cols=301 Identities=26% Similarity=0.362 Sum_probs=261.5
Q ss_pred eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++.+.+.+ ++++++|.|.|+++||||||.++|||+.|...+.|...... .+|+++|.|++|+|+++|++|++|
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~-~~P~i~G~d~aG~V~avG~~V~~~ 79 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVR-PLPFIPGSEAAGVVVAVGSGVTGF 79 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCC-CCCCcccceeEEEEEEeCCCCCCc
Confidence 789999987765 88999999999999999999999999999999999732222 699999999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||||+.... .+ .+ |+|+||+.+|++.++++|+
T Consensus 80 ~~GdrV~~~~~-------------------------~~--~~-------------------G~~AEy~~v~a~~~~~~P~ 113 (326)
T COG0604 80 KVGDRVAALGG-------------------------VG--RD-------------------GGYAEYVVVPADWLVPLPD 113 (326)
T ss_pred CCCCEEEEccC-------------------------CC--CC-------------------CcceeEEEecHHHceeCCC
Confidence 99999986530 00 22 3999999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++++||++++.++|||+++.+..++++|++|||+|+ |++|++++|+||++|+ +++++.+++++.++++++|+++++
T Consensus 114 ~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi 192 (326)
T COG0604 114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVI 192 (326)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEE
Confidence 99999999999999999999999899999999999987 9999999999999998 777777788888899999999999
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (373)
++++ .+|.+++++++++ ++|+|||++|+.. +..++++|+++ |+++.+|...+....+++...++. .++++|..
T Consensus 193 ~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~ 267 (326)
T COG0604 193 NYRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVT 267 (326)
T ss_pred cCCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEec
Confidence 9988 7899999999998 8999999999888 88999999997 999999985433455677666665 88888887
Q ss_pred cCCC---CchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 331 FGGL---KPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 331 ~~~~---~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
.... ...+.+.++.+++++|++++ ..|++++...+.++.
T Consensus 268 ~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~ 312 (326)
T COG0604 268 LGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHL 312 (326)
T ss_pred ceecchHHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHH
Confidence 6544 22467888999999999997 689999965555543
No 19
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=4.9e-47 Score=371.38 Aligned_cols=324 Identities=26% Similarity=0.367 Sum_probs=260.9
Q ss_pred ceeeEEeecCCCCeEEEEEecCCCC-------CCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC
Q 017335 15 RCKAAICRIPGKPLVIEEIEVEPPK-------AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG 87 (373)
Q Consensus 15 ~~ka~~~~~~~~~l~~~~~~~p~~~-------~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG 87 (373)
-|||+++.++++ ++++++|.|+|+ +|||||||.++|||++|++.+.|..+. .+|.++|||++|+|+++|
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~---~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA---PTGLVLGHEITGEVIEKG 77 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC---CCCccccceeEEEEEEEc
Confidence 389999999887 999999999874 689999999999999999999886532 578999999999999999
Q ss_pred CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCC---CCCCCC----CCCCccccccCCceecccccccceeee
Q 017335 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG---YRPNMP----RDGTSRFRELKGDVIHHFLNISSFTEY 160 (373)
Q Consensus 88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~---~~~g~~----~~G~~~~~~~~~~~~~~~~~~g~~a~~ 160 (373)
++|++|++||||++.+...|+.|.+|++|++++|.+.... ...|+. ++| +|+||
T Consensus 78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G-------------------~~aey 138 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVG-------------------GQSEY 138 (393)
T ss_pred CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCC-------------------ceEEE
Confidence 9999999999999999999999999999999999975321 012221 234 99999
Q ss_pred EEeecc--ceEEcCCCCCh----hhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEc
Q 017335 161 SVVDIT--HVVKITPHIPL----GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234 (373)
Q Consensus 161 ~~v~~~--~~~~lP~~l~~----~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~ 234 (373)
+.+|+. .++++|++++. .+++++.+++.++|+++ +..+++++++|||.|+|++|++++|+|+.+|++.|++++
T Consensus 139 ~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d 217 (393)
T TIGR02819 139 VMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGD 217 (393)
T ss_pred EEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeC
Confidence 999964 79999998753 34667777999999965 567899999999998999999999999999995567678
Q ss_pred CChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCH--------------HHHHHHHHHhccCCc
Q 017335 235 INPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT--------------SVMNDAFNSSREGWG 299 (373)
Q Consensus 235 ~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--------------~~~~~~~~~l~~~~G 299 (373)
+++++++.++++|++.+.+.+. .++.+.+.+++++ ++|++||++|.+ .+++.++++++++ |
T Consensus 218 ~~~~r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G 293 (393)
T TIGR02819 218 LNPARLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-G 293 (393)
T ss_pred CCHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-C
Confidence 8889999999999975443333 4677778888876 899999999985 3699999999997 9
Q ss_pred eEEEEcccCCCCc-----------cccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC------CcccccC
Q 017335 300 KTVILGVEMHGSP-----------ISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR------SSFHLCD 361 (373)
Q Consensus 300 ~~v~~G~~~~~~~-----------~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~------~~~~~~~ 361 (373)
+++.+|.+..... +++....++. ++++.|+. ....+.+.++++++.+|++++ +.|++++
T Consensus 294 ~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~ 370 (393)
T TIGR02819 294 AIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDD 370 (393)
T ss_pred EEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHH
Confidence 9999998632211 1233333333 66777642 111234478999999999874 5699999
Q ss_pred CCcccccc
Q 017335 362 PNSDSAGL 369 (373)
Q Consensus 362 ~~~a~~~~ 369 (373)
+++|++.+
T Consensus 371 ~~~a~~~~ 378 (393)
T TIGR02819 371 APEGYAEF 378 (393)
T ss_pred HHHHHHHH
Confidence 99988754
No 20
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=4.7e-46 Score=362.53 Aligned_cols=320 Identities=23% Similarity=0.322 Sum_probs=263.9
Q ss_pred ceeeEE--eecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335 15 RCKAAI--CRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 15 ~~ka~~--~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
+.||+. ..+....+++.+++.|+|+++||+|||.++|||++|++.+.|.+... .+|.++|||++|+|+++|+++++
T Consensus 4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~--~~p~i~GhE~aG~Vv~vG~~v~~ 81 (375)
T PLN02178 4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFS--RYPIIPGHEIVGIATKVGKNVTK 81 (375)
T ss_pred cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCC--CCCcccCceeeEEEEEECCCCCc
Confidence 344444 44443458888999999999999999999999999999998865433 56899999999999999999999
Q ss_pred cCCCCEEEeeCCC-CCCCCccccCCCCCcCccCCCCCC----CCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335 93 VKERDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (373)
Q Consensus 93 ~~~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~----~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (373)
|++||||++.+.. .|+.|.+|++|++++|++...... .|...+| +|+||+.+|++.
T Consensus 82 ~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~ 142 (375)
T PLN02178 82 FKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQG-------------------GYSDVIVVDHRF 142 (375)
T ss_pred cCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCC-------------------ccccEEEEchHH
Confidence 9999999877655 699999999999999998643100 1222344 999999999999
Q ss_pred eEEcCCCCChhhhhccchhhhhHHHHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHHH
Q 017335 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKK 245 (373)
Q Consensus 168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~~ 245 (373)
++++|+++++++++++++...|+|+++..... .++|++|+|.|+|++|++++|+||.+|+ +|+++++++++ .+.+++
T Consensus 143 ~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~ 221 (375)
T PLN02178 143 VLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDR 221 (375)
T ss_pred eEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHh
Confidence 99999999999999999999999987644432 3689999999999999999999999999 88888876554 778889
Q ss_pred cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR 324 (373)
Q Consensus 246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~ 324 (373)
+|+++++++.+ . +.+.+.++ ++|+||||+|....+..++++++++ |+++.+|.... ..+++...++. ++
T Consensus 222 lGa~~~i~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~--~~~~~~~~~~~~~~ 291 (375)
T PLN02178 222 LGADSFLVTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEK--PLDLPIFPLVLGRK 291 (375)
T ss_pred CCCcEEEcCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCC--CCccCHHHHHhCCe
Confidence 99999998764 2 34445543 7999999999887789999999997 99999997532 35667777666 89
Q ss_pred EEEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335 325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL 369 (373)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~ 369 (373)
++.|+..+. .+++.++++++++|++++ +.|+++++++|++.+
T Consensus 292 ~i~g~~~~~---~~~~~~~~~l~~~g~i~~~i~~~~l~~~~~A~~~~ 335 (375)
T PLN02178 292 MVGGSQIGG---MKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRL 335 (375)
T ss_pred EEEEeCccC---HHHHHHHHHHHHhCCCcccEEEEeHHHHHHHHHHH
Confidence 999986554 578999999999999987 669999999998754
No 21
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=8.6e-46 Score=357.77 Aligned_cols=318 Identities=25% Similarity=0.371 Sum_probs=272.2
Q ss_pred EEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC-CCCCCCCCccccCcccEEEEEeCCCCCccCCCC
Q 017335 19 AICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERD 97 (373)
Q Consensus 19 ~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 97 (373)
+++++++++++++++|.|.|+++||+|||.++|+|++|++.+.+.. +.. .+|.++|||++|+|+++|++++.+ +||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNH--ALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccC--CCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 4567777668999999999999999999999999999999874433 222 578999999999999999999877 999
Q ss_pred EEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC----
Q 017335 98 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP---- 173 (373)
Q Consensus 98 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~---- 173 (373)
||++.+..+|+.|.+|+.|.+++|..... .|...+| +|+||+.+|++.++++|+
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~ 136 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLA 136 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCccccc
Confidence 99999999999999999999999977543 3444456 999999999999999999
Q ss_pred --CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 174 --HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 174 --~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
++++++++.+.+++.|+|+++ ....+++|++|+|+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++
T Consensus 137 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~ 214 (349)
T TIGR03201 137 AAGLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLT 214 (349)
T ss_pred ccCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceE
Confidence 899999999999999999976 45789999999999999999999999999999 89999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCC-Ccc----EEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GAD----YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS 325 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d----~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~ 325 (373)
+++.+...+++.+.+.+++++ ++| +||||+|....+..++++++++ |+++.+|.... ..+++...++. +.+
T Consensus 215 i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~ 291 (349)
T TIGR03201 215 LNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHAR 291 (349)
T ss_pred ecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccE
Confidence 987652223677788888877 776 8999999988788999999997 99999998543 23566666666 788
Q ss_pred EEEeecCCCCchhHHHHHHHHHHcCCCCC----CcccccCCCcccccc
Q 017335 326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~----~~~~~~~~~~a~~~~ 369 (373)
+.|+.... .++++++++++++|++++ +.|+++++++|++.+
T Consensus 292 ~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~ 336 (349)
T TIGR03201 292 ALGNWGCP---PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAA 336 (349)
T ss_pred EEEEecCC---HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHH
Confidence 88876433 578999999999999964 568999999888654
No 22
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.3e-45 Score=356.17 Aligned_cols=321 Identities=21% Similarity=0.317 Sum_probs=267.1
Q ss_pred eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++.+++. ++++++|.|.| .++||+|||.++++|++|+..+..... . .+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-H--YYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-C--CCCcccccceEEEEEEeCCCCCCCC
Confidence 79999999876 99999999997 599999999999999999875322111 1 3678999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|++.+...|+.|++|+.|.+++|.+... .|...+| +|++|+.+|++.++++|++
T Consensus 77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~ 134 (347)
T PRK10309 77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG-------------------GNAEYIVVKRKNLFALPTD 134 (347)
T ss_pred CCCEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------------ccceeEEeehHHeEECcCC
Confidence 99999999999999999999999999976443 4444556 9999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
+++++++.+. ++.++|++ .+...++++++|||+|+|++|++++|+|+.+|++.|+++++++++++.++++|+++++++
T Consensus 135 ~s~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~ 212 (347)
T PRK10309 135 MPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNS 212 (347)
T ss_pred CCHHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecC
Confidence 9999999875 56677876 466788999999999999999999999999999558999999999999999999999988
Q ss_pred CCCCCccHHHHHHHhcCC-Ccc-EEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcccc-CHHHHhh-CcEEEEee
Q 017335 255 ATCGDKTVSQVIKEMTDG-GAD-YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEILK-GRSVCGTY 330 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-~~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~-~~~~~~~-~~~i~g~~ 330 (373)
+. .+ .+.+.+++.+ ++| ++|||+|...++..++++++++ |+++.+|.......++. +...++. ++++.|+.
T Consensus 213 ~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~ 287 (347)
T PRK10309 213 RE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSW 287 (347)
T ss_pred cc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEe
Confidence 76 44 4566677666 888 9999999987799999999997 99999997543222221 2224454 89999987
Q ss_pred cCCCC--chhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 331 FGGLK--PRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 331 ~~~~~--~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
.+... ..++++++++++++|++++ +.|+++++.+|++.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~ 333 (347)
T PRK10309 288 MNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDL 333 (347)
T ss_pred ccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHH
Confidence 64322 2477899999999999863 678899998888654
No 23
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.1e-45 Score=354.16 Aligned_cols=309 Identities=19% Similarity=0.245 Sum_probs=264.0
Q ss_pred eEEeecCCC----CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 18 AAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 18 a~~~~~~~~----~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|+++..++. .++++++|.|.|+++||+|||.++|||++|++.+.|..+.. .+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~ 78 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH--RPRVTPGHEVVGEVAGRGADAGGF 78 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC--CCCccCCcceEEEEEEECCCCccc
Confidence 345555542 38999999999999999999999999999999998876543 457899999999999999999999
Q ss_pred CCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 94 KERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 94 ~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
++||+|++.+. ..|+.|++|+.|.+++|++... .|...+| +|+||+.+|++.++++|
T Consensus 79 ~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP 136 (329)
T TIGR02822 79 AVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLP 136 (329)
T ss_pred CCCCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECC
Confidence 99999987764 4799999999999999988654 4555556 99999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
+++++++++.+++.+.|||+++ ....+++|++|||+|+|++|++++|+|+.+|+ +|++++++++|.++++++|+++++
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi 214 (329)
T TIGR02822 137 TGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAG 214 (329)
T ss_pred CCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceec
Confidence 9999999999999999999976 56789999999999999999999999999999 899999999999999999999999
Q ss_pred cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF 331 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 331 (373)
+..+ .. .+++|+++++.+...++..++++++++ |+++.+|..... ..+++...++. ++++.++..
T Consensus 215 ~~~~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~ 280 (329)
T TIGR02822 215 GAYD---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTS 280 (329)
T ss_pred cccc---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeec
Confidence 7543 11 126899999888777899999999997 999999974332 23566666555 889998864
Q ss_pred CCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335 332 GGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL 369 (373)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~ 369 (373)
.. ++++.++++++++|++++ +.|+++++++|++.+
T Consensus 281 ~~---~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~ 317 (329)
T TIGR02822 281 NT---RADAREFLELAAQHGVRVTTHTYPLSEADRALRDL 317 (329)
T ss_pred CC---HHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHH
Confidence 33 578899999999999986 779999999998654
No 24
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.5e-45 Score=355.27 Aligned_cols=319 Identities=20% Similarity=0.277 Sum_probs=254.4
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCC-CCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++..++.+++++++|.|+|+++||||||.++|||++|++.+.|.++... ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 68999986544499999999999999999999999999999999988753221 146789999999999999999 8999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
+||||+..+...|++|.+|+.|++++|+...+. ..|.. .+| +|+||+.+|++.++++|+
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~G-------------------~~aey~~~~~~~~~~~P~ 139 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLHG-------------------FMREYFVDDPEYLVKVPP 139 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCCc-------------------cceeEEEeccccEEECCC
Confidence 999999998889999999999999999875431 12321 234 999999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHH------HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC---ChhHHHHHH
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWK------VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGK 244 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~------~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~ 244 (373)
+++ +. +++..++.+++.++.. ...+++|++|||+|+|++|++++|+||.+|+ +|+++++ +++|++.++
T Consensus 140 ~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~ 216 (355)
T cd08230 140 SLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVE 216 (355)
T ss_pred CCC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHH
Confidence 998 44 4444466665544322 2236789999999999999999999999999 8999987 688999999
Q ss_pred HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccC----HHHH
Q 017335 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN----SIEI 320 (373)
Q Consensus 245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~----~~~~ 320 (373)
++|++. +++++ .++.+ .. ..+++|+||||+|....++.+++.++++ |+++.+|.......++++ ...+
T Consensus 217 ~~Ga~~-v~~~~---~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~ 288 (355)
T cd08230 217 ELGATY-VNSSK---TPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDL 288 (355)
T ss_pred HcCCEE-ecCCc---cchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhH
Confidence 999987 46554 44433 21 2248999999999887789999999997 999999985442344555 2344
Q ss_pred hh-CcEEEEeecCCCCchhHHHHHHHHHHcCC------CC---CCcccccCCCcccccc
Q 017335 321 LK-GRSVCGTYFGGLKPRSDIATLAQKYLDKV------HL---RSSFHLCDPNSDSAGL 369 (373)
Q Consensus 321 ~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~------i~---~~~~~~~~~~~a~~~~ 369 (373)
+. ++++.|+..+. .++++++++++.+++ +. .+.|+++++.+|++.+
T Consensus 289 ~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~ 344 (355)
T cd08230 289 VLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEK 344 (355)
T ss_pred hhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhc
Confidence 54 89999986443 577899999999877 22 3789999999988754
No 25
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6.9e-45 Score=352.51 Aligned_cols=322 Identities=22% Similarity=0.317 Sum_probs=270.7
Q ss_pred ccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335 13 VIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 13 ~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
.++++|++++.+++++++++++.|+|+++||+|||.+++||++|++.+.|..+.. .+|.++|||++|+|+++|+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~E~~G~Vv~vG~~v~~ 84 (357)
T PLN02514 7 EKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMS--NYPMVPGHEVVGEVVEVGSDVSK 84 (357)
T ss_pred CceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcC--CCCccCCceeeEEEEEECCCccc
Confidence 4568999999999889999999999999999999999999999999988865443 57889999999999999999999
Q ss_pred cCCCCEEEeeCCC-CCCCCccccCCCCCcCccCCCCC----CCCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335 93 VKERDLVLPIFHR-DCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (373)
Q Consensus 93 ~~~Gd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~----~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (373)
|++||+|++.+.. .|+.|..|+.|.+++|.+....+ ..|...+| +|+||+.+|.+.
T Consensus 85 ~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G-------------------~~aey~~v~~~~ 145 (357)
T PLN02514 85 FTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQG-------------------GFASAMVVDQKF 145 (357)
T ss_pred ccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCC-------------------ccccEEEEchHH
Confidence 9999999876543 69999999999999998753211 11222234 999999999999
Q ss_pred eEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc
Q 017335 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF 246 (373)
Q Consensus 168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~l 246 (373)
++++|+++++++++.+++.+.|||+++......++|++|+|+|+|++|++++|+||.+|+ +|++++++++++..+ +++
T Consensus 146 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~ 224 (357)
T PLN02514 146 VVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHL 224 (357)
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhc
Confidence 999999999999999999999999977655556899999999989999999999999999 788888887776555 569
Q ss_pred CCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335 247 GITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS 325 (373)
Q Consensus 247 ga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~ 325 (373)
|+++++++.+ . +.+.+.+. ++|++|||+|...+++.++++++++ |+++.+|.... ..+++...++. +++
T Consensus 225 Ga~~~i~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~ 294 (357)
T PLN02514 225 GADDYLVSSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKV 294 (357)
T ss_pred CCcEEecCCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcE
Confidence 9998887654 2 23444443 7999999999877799999999997 99999997532 34666666666 899
Q ss_pred EEEeecCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335 326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL 369 (373)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~ 369 (373)
+.|+..+. ..++.++++++++|++++ +.|+++++.+|++.+
T Consensus 295 i~g~~~~~---~~~~~~~~~~~~~g~l~~~i~~~~l~~~~~A~~~~ 337 (357)
T PLN02514 295 ITGSFIGS---MKETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERL 337 (357)
T ss_pred EEEEecCC---HHHHHHHHHHHHhCCCcCcEEEEcHHHHHHHHHHH
Confidence 99997655 578999999999999875 779999999988764
No 26
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=4.4e-44 Score=348.82 Aligned_cols=351 Identities=46% Similarity=0.729 Sum_probs=283.0
Q ss_pred cccceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335 12 KVIRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (373)
Q Consensus 12 ~~~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (373)
+..+|||+++..++++++++++|.|+|.++||+|||.++|||++|++.+.|... . .+|.++|||++|+|+++|++++
T Consensus 4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~ 80 (373)
T cd08299 4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-T--PFPVILGHEAAGIVESVGEGVT 80 (373)
T ss_pred ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-C--CCCccccccceEEEEEeCCCCc
Confidence 456799999998877799999999999999999999999999999999988753 2 5788999999999999999999
Q ss_pred ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (373)
Q Consensus 92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l 171 (373)
.+++||+|++.+..+|+.|.+|+.+.++.|+.....-..|+..+|..++..+ |.+.+++...|+|+||+.++++.++++
T Consensus 81 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~e~~~v~~~~~~~l 159 (373)
T cd08299 81 TVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCK-GKPIHHFLGTSTFSEYTVVDEIAVAKI 159 (373)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccC-CcccccccCCCcccceEEecccceeeC
Confidence 9999999999998999999999999999998754310012211111111100 122233333569999999999999999
Q ss_pred CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
|+++++++++++++++.+||+++.+...++++++|||+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++
T Consensus 160 P~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~ 239 (373)
T cd08299 160 DAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATEC 239 (373)
T ss_pred CCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE
Confidence 99999999999999999999988888899999999999889999999999999998679999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHh-ccCCceEEEEcccCCCCccccCHHHHhhCcEEEEee
Q 017335 252 INPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS-REGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (373)
++..+ ...++.+.+.+++++++|+++||+|++..+..++..+ +++ |+++.+|.......++++...+..+.++.++.
T Consensus 240 i~~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~ 317 (373)
T cd08299 240 INPQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAV 317 (373)
T ss_pred ecccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEE
Confidence 98765 1123667777776668999999999866677767765 576 99999997543334556554444588999988
Q ss_pred cCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 331 FGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
.+.+...+++.++++++.++.+++ +.|+++++.++++.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~ 360 (373)
T cd08299 318 FGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDL 360 (373)
T ss_pred ecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHH
Confidence 777665677888888888876543 66888888777654
No 27
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=4.5e-44 Score=347.85 Aligned_cols=346 Identities=33% Similarity=0.610 Sum_probs=287.8
Q ss_pred cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|+|||+++.++++++++++.+.|++.++||+|||.++++|++|+....+..+ . .+|.++|||++|+|+++|++++++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-T--PLPAVLGHEGAGVVEAVGSAVTGL 77 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-C--CCCcccccceeEEEEEeCCCcccC
Confidence 5799999999776789999999999999999999999999999999888654 2 578899999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceec-ccccccceeeeEEeeccceEEcC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH-HFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~-~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
++||+|++.+. .|++|.+|+.+..++|.........|...+|.-.++.+.+++.+ +++..|+|++|+.++++.++++|
T Consensus 78 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP 156 (365)
T cd08278 78 KPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVD 156 (365)
T ss_pred CCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECC
Confidence 99999998764 89999999999999998655332334444443222223333322 23345799999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
+++++++++.+++.+.||+.++.+...++++++|||+|+|++|++++++|+.+|+++|+++++++++.+.++++|+++++
T Consensus 157 ~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i 236 (365)
T cd08278 157 KDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVI 236 (365)
T ss_pred CCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEe
Confidence 99999999999999999999888888899999999998899999999999999997799999999999999999999999
Q ss_pred cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF 331 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 331 (373)
+++. .++.+.+.+.+++++|+++||+|....+..++++++++ |+++.+|..+......++...++. +.++.++..
T Consensus 237 ~~~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (365)
T cd08278 237 NPKE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIE 312 (365)
T ss_pred cCCC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeec
Confidence 9876 67888888877339999999999877799999999997 999999975333344667766644 899988765
Q ss_pred CCCCchhHHHHHHHHHHcCCCCC----CcccccCCCcccc
Q 017335 332 GGLKPRSDIATLAQKYLDKVHLR----SSFHLCDPNSDSA 367 (373)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~g~i~~----~~~~~~~~~~a~~ 367 (373)
......+.+.+++++++++++.+ ..|+++++.+++.
T Consensus 313 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~ 352 (365)
T cd08278 313 GDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIA 352 (365)
T ss_pred CCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHH
Confidence 54444567889999999998854 4578888877764
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=3.9e-44 Score=346.30 Aligned_cols=320 Identities=28% Similarity=0.428 Sum_probs=275.1
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-C--------CCCCCccccCcccEEEEEe
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-P--------KLPLPVIFGHEAVGVVESV 86 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~--------~~~~p~~~G~e~~G~V~~v 86 (373)
|||+++.+++. ++++++|.|+|+++||+||+.++++|++|+..+.+.... . ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 79999998876 999999999999999999999999999998866533210 0 0136889999999999999
Q ss_pred CCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeec
Q 017335 87 GEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (373)
Q Consensus 87 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (373)
|+++++|++||+|+..+..+|++|.+|+.+.+++|..... .|+. .+| +|++|+.++.
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~a~~~~~~~ 137 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGGG-------------------GFAEYVVVPA 137 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCCC-------------------ceeeEEEech
Confidence 9999999999999999989999999999999999986543 3332 245 9999999999
Q ss_pred cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (373)
Q Consensus 166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~ 245 (373)
..++++|+++++++++.+ .++.|||.++ ....++++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 138 ~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~ 215 (351)
T cd08233 138 YHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEE 215 (351)
T ss_pred HHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 999999999999999876 5888999976 78889999999999999999999999999999789999999999999999
Q ss_pred cCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-C
Q 017335 246 FGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-G 323 (373)
Q Consensus 246 lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~ 323 (373)
+|+++++++++ .++.+.+.+.+++ ++|++||++|....+..++++++++ |+++.+|... ...+++...+.. +
T Consensus 216 ~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~ 289 (351)
T cd08233 216 LGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKE 289 (351)
T ss_pred hCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhC
Confidence 99999999887 7888888888877 7999999999877799999999997 9999999854 345677776666 8
Q ss_pred cEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCC-Ccccccc
Q 017335 324 RSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDP-NSDSAGL 369 (373)
Q Consensus 324 ~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~-~~a~~~~ 369 (373)
+++.|+.... .++++++++++++|++++ +.|+++++ ++|++.+
T Consensus 290 ~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~ 338 (351)
T cd08233 290 KTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEEL 338 (351)
T ss_pred cEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHH
Confidence 9999986443 478999999999999954 57888885 5676543
No 29
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.1e-43 Score=344.35 Aligned_cols=331 Identities=24% Similarity=0.373 Sum_probs=275.1
Q ss_pred eeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc----
Q 017335 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE---- 92 (373)
Q Consensus 17 ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---- 92 (373)
||+++.++++.+++++++.|.|+++||+|||.++++|++|+..+.|..+.. .+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~~ 79 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRV--PLPIILGHEGVGRVVALGGGVTTDVAG 79 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCC--CCCcccccCCceEEEEeCCCccccccC
Confidence 799999988669999999999999999999999999999999988876533 67889999999999999999986
Q ss_pred --cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCC-CCccccccCCceecccccccceeeeEEeecc-ce
Q 017335 93 --VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD-GTSRFRELKGDVIHHFLNISSFTEYSVVDIT-HV 168 (373)
Q Consensus 93 --~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~-G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~ 168 (373)
|++||+|++.+...|+.|.+|+.+.++.|++..+ .|...+ |. ....|+|++|+.++++ .+
T Consensus 80 ~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~ 143 (361)
T cd08231 80 EPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCDD-------------PHLSGGYAEHIYLPPGTAI 143 (361)
T ss_pred CccCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccccC-------------CCCCcccceEEEecCCCce
Confidence 9999999999999999999999999999988664 232211 00 0012499999999986 79
Q ss_pred EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (373)
Q Consensus 169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 248 (373)
+++|++++++++++++++++|||.++.+....+++++|||+|+|++|++++++|+.+|+++|+++++++++.++++++|+
T Consensus 144 ~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~ 223 (361)
T cd08231 144 VRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGA 223 (361)
T ss_pred EECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence 99999999999999988999999988666666799999999999999999999999999789999999999999999999
Q ss_pred ceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEE
Q 017335 249 TDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV 326 (373)
Q Consensus 249 ~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i 326 (373)
+++++.+.....++...+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|........+++...++. ++++
T Consensus 224 ~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 302 (361)
T cd08231 224 DATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTI 302 (361)
T ss_pred CeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEE
Confidence 999988752112233567777776 8999999999877789999999997 999999975433344566655555 8999
Q ss_pred EEeecCCCCchhHHHHHHHHHHcC--CCCC-----CcccccCCCcccccc
Q 017335 327 CGTYFGGLKPRSDIATLAQKYLDK--VHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 327 ~g~~~~~~~~~~~~~~~~~~~~~g--~i~~-----~~~~~~~~~~a~~~~ 369 (373)
.++..+. .+++.++++++.++ .+.+ +.|+++++.+|++.+
T Consensus 303 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~ 349 (361)
T cd08231 303 IGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELA 349 (361)
T ss_pred EEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHH
Confidence 9886543 56788999999887 4432 668888888887543
No 30
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=2.1e-43 Score=343.17 Aligned_cols=347 Identities=45% Similarity=0.769 Sum_probs=289.0
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
+||+++.+.++++++++++.|.+++++|+||+.++++|++|++.+.+.... .+|.++|||++|+|+++|++++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~---~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT---PLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC---CCCcccccceeEEEEEeCCCcccCCC
Confidence 579999988777999999999999999999999999999999988876542 46789999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||+|++.+...|++|.+|+.+.+++|+...+.-+.|...+|...|-- +|-+.+++.+.|+|++|+.++++.++++|+++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~ 156 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDA 156 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCC
Confidence 99999999899999999999999999876643223332233222211 22233445556799999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~ 255 (373)
++++++.+.+++.+||.++.+...++++++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++++++..
T Consensus 157 ~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 236 (365)
T cd05279 157 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR 236 (365)
T ss_pred CHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence 99999999999999999888888999999999998899999999999999996688888899999999999999999887
Q ss_pred CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhc-cCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCC
Q 017335 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR-EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL 334 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 334 (373)
. .+.++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|........+++...+.++.+++|+..+.+
T Consensus 237 ~-~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 314 (365)
T cd05279 237 D-QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGW 314 (365)
T ss_pred c-ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCC
Confidence 6 11167777888775589999999998677999999999 97 999999875433456777777744888999877766
Q ss_pred CchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 335 KPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 335 ~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
...+.+.+++++++++++++ +.|+++++.+|++.
T Consensus 315 ~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~ 353 (365)
T cd05279 315 KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDL 353 (365)
T ss_pred chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHH
Confidence 66788999999999998864 55777777777653
No 31
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.4e-42 Score=333.06 Aligned_cols=316 Identities=24% Similarity=0.367 Sum_probs=274.3
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++..++++++++++|.|+++++||+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++|++++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~vG~~v~~~~~ 78 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL--SYPRVPGHEVVGRIDAVGEGVSRWKV 78 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC--CCCcccCcceeEEEEEECCCCccCCC
Confidence 7999999986569999999999999999999999999999999988865433 56889999999999999999999999
Q ss_pred CCEEEeeC-CCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 96 RDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 96 Gd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
||+|++.+ ...|++|.+|..|.++.|..... .|+..+| +|++|+.++.+.++++|++
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~ 136 (333)
T cd08296 79 GDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDD 136 (333)
T ss_pred CCEEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCC
Confidence 99998755 46799999999999999987664 4554455 8999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
+++++++.+++.+.+||.++. ...++++++|||+|+|++|++++++|+.+|+ +|+++++++++++.++++|+++++++
T Consensus 137 ~~~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~ 214 (333)
T cd08296 137 LDAAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDT 214 (333)
T ss_pred CCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecC
Confidence 999999999999999999764 4589999999999999999999999999999 89999999999999999999999998
Q ss_pred CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG 333 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 333 (373)
.. .++...+.+. +++|+++|+.|....+..++++++++ |+++.+|... ..++++...++. ++++.++..+.
T Consensus 215 ~~---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~ 286 (333)
T cd08296 215 SK---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT 286 (333)
T ss_pred CC---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC
Confidence 76 6677666665 37999999998666799999999997 9999999754 345667666556 99999986443
Q ss_pred CCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG 368 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~ 368 (373)
..++.++++++++++++. +.|+++++.+|+..
T Consensus 287 ---~~~~~~~~~~~~~~~l~~~v~~~~~~~~~~a~~~ 320 (333)
T cd08296 287 ---ALDSEDTLKFSALHGVRPMVETFPLEKANEAYDR 320 (333)
T ss_pred ---HHHHHHHHHHHHhCCCCceEEEEEHHHHHHHHHH
Confidence 577889999999998875 77899999888754
No 32
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.6e-42 Score=334.99 Aligned_cols=325 Identities=25% Similarity=0.278 Sum_probs=271.9
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++.+++. +++++.+.|.++++||+|||.++++|++|++.+.+..... .+|.++|||++|+|+++|+.++++++
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGE--RHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCC--CCCcccCcceEEEEEEecCCcCccCC
Confidence 79999999886 8999999999999999999999999999999887765443 56889999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP 173 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP~ 173 (373)
||+|+..+...|++|..|..|.++.|.........+...+| +|++|+.+|.+ .++++|+
T Consensus 78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g-------------------~~~~y~~v~~~~~~~~~lP~ 138 (351)
T cd08285 78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDG-------------------VFAEYFHVNDADANLAPLPD 138 (351)
T ss_pred CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCc-------------------ceeEEEEcchhhCceEECCC
Confidence 99999988889999999999999999864321011222334 99999999974 8999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
++++++++.++..+.|||++ .+...++++++|||+|+|++|++++|+|+.+|+..|+++++++++.+.++++|++++++
T Consensus 139 ~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~ 217 (351)
T cd08285 139 GLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVD 217 (351)
T ss_pred CCCHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEec
Confidence 99999999999899999997 47788999999999988999999999999999967999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH--hh-CcEEEEe
Q 017335 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI--LK-GRSVCGT 329 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~--~~-~~~i~g~ 329 (373)
++. .++.+.+.+++.+ ++|++|||+|+...+..++++++++ |+++.+|.......++++...+ .. ..++.+.
T Consensus 218 ~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~ 293 (351)
T cd08285 218 YKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGG 293 (351)
T ss_pred CCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEe
Confidence 877 6788888888766 8999999999877789999999997 9999999765433344443222 22 5666655
Q ss_pred ecCCCCchhHHHHHHHHHHcCCCCC------CcccccCCCcccccc
Q 017335 330 YFGGLKPRSDIATLAQKYLDKVHLR------SSFHLCDPNSDSAGL 369 (373)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~g~i~~------~~~~~~~~~~a~~~~ 369 (373)
.... ..++++++++++++|++++ +.++++++.+|+..+
T Consensus 294 ~~~~--~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~ 337 (351)
T cd08285 294 LCPG--GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLM 337 (351)
T ss_pred ecCC--ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHH
Confidence 3221 2467999999999999886 237888888877543
No 33
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=4.2e-43 Score=307.96 Aligned_cols=301 Identities=25% Similarity=0.263 Sum_probs=263.4
Q ss_pred CcccceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335 11 GKVIRCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (373)
Q Consensus 11 ~~~~~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (373)
..|+..|.+++++.|.. +++++.|.|+|+|+|++||..|+|+|.-|..+.+|-+... ..|++||-|++|+|+++|+
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~--plPytpGmEaaGvVvAvG~ 81 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPA--PLPYTPGMEAAGVVVAVGE 81 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCC--CCCcCCCcccceEEEEecC
Confidence 46778899999988764 8999999999999999999999999999999999998644 7999999999999999999
Q ss_pred CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (373)
Q Consensus 89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 168 (373)
+|+++++||||+..- +. |.|+|++.+|...+
T Consensus 82 gvtdrkvGDrVayl~------------------------------~~-------------------g~yaee~~vP~~kv 112 (336)
T KOG1197|consen 82 GVTDRKVGDRVAYLN------------------------------PF-------------------GAYAEEVTVPSVKV 112 (336)
T ss_pred CccccccccEEEEec------------------------------cc-------------------hhhheeccccceee
Confidence 999999999997532 22 38999999999999
Q ss_pred EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (373)
Q Consensus 169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 247 (373)
.++|+.+++.+||++....+|||..+++...+++|++|||+.+ |++|+++.|++|..|+ ++|++.++++|.+.+++-|
T Consensus 113 ~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG 191 (336)
T KOG1197|consen 113 FKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENG 191 (336)
T ss_pred ccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcC
Confidence 9999999999999999999999998899999999999999976 9999999999999999 9999999999999999999
Q ss_pred CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS 325 (373)
Q Consensus 248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~ 325 (373)
++|.|+++. +|+.+++.++|++ |+|+++|.+|... +...+.+|++. |+++.+|.. ++..-+++...+.- ++.
T Consensus 192 ~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~a-sgl~~p~~l~~ls~k~l~ 265 (336)
T KOG1197|consen 192 AEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNA-SGLIDPIPLNQLSPKALQ 265 (336)
T ss_pred Ccceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEeccc-cCCCCCeehhhcChhhhh
Confidence 999999999 9999999999988 9999999999877 99999999997 999999984 44444555555444 554
Q ss_pred EEE-eecCCCCchh----HHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 326 VCG-TYFGGLKPRS----DIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 326 i~g-~~~~~~~~~~----~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
+.. +.++-....+ ...++..++.+|.|++ +.||++++.+|.+++
T Consensus 266 lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~di 317 (336)
T KOG1197|consen 266 LVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADI 317 (336)
T ss_pred hccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHH
Confidence 432 3333333233 3567888899999997 899999999998765
No 34
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.2e-42 Score=334.82 Aligned_cols=298 Identities=19% Similarity=0.235 Sum_probs=237.6
Q ss_pred ceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC--CCCCCccccCcccEEEEEeCCCCCc
Q 017335 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--KLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 15 ~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~--~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
.-++++++++++ ++++++|.|+ +++||||||.++|||++|++.+.|.+... ...+|.++|||++|+|+++|.. +
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 357899999987 9999999995 99999999999999999999998865321 0157999999999999998864 6
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
|++||||++.+...|+ |..| +..++|.+..+ .|...+| +|+||+.+|+++++++|
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~vP 132 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYDG-------------------FMQDYVFLPPDRLVKLP 132 (341)
T ss_pred cCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCCC-------------------ceEEEEEEchHHeEECC
Confidence 9999999998887787 4455 45678876543 3433455 99999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHH--hCCCCCCEEEEECCChHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCc
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGIT 249 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~--~~~~~~~~VlI~G~G~vG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~ 249 (373)
+++++++|+++. +++++|+++.+. ..+++|++|||+|+|++|++++|+++. +|..+|++++++++|++.+++.+++
T Consensus 133 ~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 999999887665 888999876442 356899999999999999999999986 6655899999999999999886665
Q ss_pred eEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCC---HHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-Cc
Q 017335 250 DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR 324 (373)
Q Consensus 250 ~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~ 324 (373)
+.++ + ...+ ++|+|||++|+ +.++..++++++++ |+++.+|... ...+++...++. ++
T Consensus 212 ~~~~-------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~ 274 (341)
T cd08237 212 YLID-------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKGL 274 (341)
T ss_pred eehh-------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCce
Confidence 3321 1 1122 79999999994 45689999999997 9999999743 245667666665 99
Q ss_pred EEEEeecCCCCchhHHHHHHHHHHcC-C----CC---CCcccccCC
Q 017335 325 SVCGTYFGGLKPRSDIATLAQKYLDK-V----HL---RSSFHLCDP 362 (373)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~g-~----i~---~~~~~~~~~ 362 (373)
++.|+..+. .+++++++++++++ + +. .+.|+++++
T Consensus 275 ~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l 317 (341)
T cd08237 275 TLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSI 317 (341)
T ss_pred EEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccH
Confidence 999986433 57899999999999 2 22 266777543
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=1.1e-41 Score=327.36 Aligned_cols=314 Identities=22% Similarity=0.350 Sum_probs=264.8
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++.+++. +++++++.|+|+++|++||+.+++||++|+..+.|..+.. .+|.++|||++|+|+++|++|+.+++
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA--KYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC--CCCcccccceEEEEEEECCCCccCCC
Confidence 78999999886 9999999999999999999999999999999888875543 57899999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||+|++.+..+|+.|.+|..+++++|..... .++..+| +|++|+.++.+.++++|+++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~ip~~~ 135 (339)
T PRK10083 78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRDG-------------------GFSEYAVVPAKNAHRIPDAI 135 (339)
T ss_pred CCEEEEccccCCCCCccccCcCcccCCCCce---EEEccCC-------------------cceeeEEechHHeEECcCCC
Confidence 9999999999999999999999999976543 3443445 89999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
+++.++ +..++.++|. +.+..+++++++|+|+|+|++|++++|+|+. +|+..|+++++++++.+.++++|+++++++
T Consensus 136 ~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~ 213 (339)
T PRK10083 136 ADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINN 213 (339)
T ss_pred CHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 998876 4457888886 6678899999999999999999999999996 699678889999999999999999999998
Q ss_pred CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (373)
++ .++.+.+.. .+ ++|++||++|+...+..++++++++ |+++.+|.... ...++...+.. ++++.++..
T Consensus 214 ~~---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~- 284 (339)
T PRK10083 214 AQ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL- 284 (339)
T ss_pred cc---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec-
Confidence 76 566666643 23 5789999999876799999999997 99999997532 23344444444 778777643
Q ss_pred CCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 333 GLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 333 ~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
..+.+.++++++++|++++ +.|++++++++++.
T Consensus 285 ---~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~ 322 (339)
T PRK10083 285 ---NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIEL 322 (339)
T ss_pred ---ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHH
Confidence 2467999999999998875 66788888777654
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=1e-41 Score=336.21 Aligned_cols=315 Identities=21% Similarity=0.241 Sum_probs=253.9
Q ss_pred cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcc-cCCCC-C---CCCCCCccccCcccEEEEEeCC
Q 017335 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTD-L---PKLPLPVIFGHEAVGVVESVGE 88 (373)
Q Consensus 14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~-~---~~~~~p~~~G~e~~G~V~~vG~ 88 (373)
|+|||+++.+++. ++++++|.|+|+++||+|||.++|||++|++.+ .|... . ....+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5799999999987 999999999999999999999999999999976 44321 1 0014788999999999999999
Q ss_pred CCC-ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc-
Q 017335 89 YVE-EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT- 166 (373)
Q Consensus 89 ~v~-~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~- 166 (373)
+|+ +|++||||++.+...|+.|..|.. .|...+| +|+||+.+|++
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~G-------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYPG-------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCCC-------------------cceEEEEecHHh
Confidence 998 599999999999888998887731 2333455 99999999987
Q ss_pred ---ceEEcCCCCChhhhhccchhhh---hHHHHH--------HHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCC--CCe
Q 017335 167 ---HVVKITPHIPLGIACLLSCGVS---TGVGAA--------WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNR--ASK 229 (373)
Q Consensus 167 ---~~~~lP~~l~~~~aa~l~~~~~---ta~~~~--------~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G--~~~ 229 (373)
.++++|+++++++++++. ++. +++.++ .++..+++|++|+|+|+ |++|++++|+|+.+| +.+
T Consensus 127 ~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~ 205 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSL 205 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCce
Confidence 689999999999998653 222 233322 24577899999999985 999999999999975 457
Q ss_pred EEEEcCChhHHHHHHHc--------CCc-eEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCc
Q 017335 230 IIGVDINPEKFEIGKKF--------GIT-DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWG 299 (373)
Q Consensus 230 Vi~~~~~~~~~~~~~~l--------ga~-~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G 299 (373)
|++++++++|++.++++ |++ +++++++ ..++.+.+++++++ ++|++||++|....++.++++++++ |
T Consensus 206 Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G 282 (410)
T cd08238 206 LVVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-G 282 (410)
T ss_pred EEEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-C
Confidence 99999999999999997 776 5677653 14677888888887 8999999999888899999999997 8
Q ss_pred eEEEEcccCC-CCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 300 KTVILGVEMH-GSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 300 ~~v~~G~~~~-~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
+++.++.... ....+++...++. +++++|+..+. .++++++++++++|++++ +.|+++++++|++.+
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~ 356 (410)
T cd08238 283 CLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNL 356 (410)
T ss_pred eEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHh
Confidence 8877654222 2234677767666 99999986443 578999999999999986 678899988887765
No 37
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.1e-41 Score=325.44 Aligned_cols=319 Identities=28% Similarity=0.416 Sum_probs=276.1
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++.++++++++.+.+.|++++++|+||+.++++|++|+....|.... ....+|.++|||++|+|+++|+++++++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 799999988667999999999999999999999999999999988776542 1126788999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|+..+...|+.|..|..|.+++|++..+ .|+..+| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCC
Confidence 99999999999999999999999999998886 5666667 9999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHH-hCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~-~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
+++++++.++..+.|||.++... ..+.++++|||+|+|++|++++++|+.+| . +|+++++++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999987665 46889999999999889999999999999 6 899999999999999999999999
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEee
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTY 330 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~ 330 (373)
+++. . +.+++.+++++ ++|+++|++|+...+..++++++++ |+++.+|.... .+++...++ +++++.++.
T Consensus 218 ~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~ 289 (340)
T cd05284 218 NASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSL 289 (340)
T ss_pred cCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEe
Confidence 9886 5 77888888776 8999999999866699999999997 99999997532 344444433 488988875
Q ss_pred cCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335 331 FGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~ 368 (373)
... .+.+.+++++++++++.+ +.|+++++.++++.
T Consensus 290 ~~~---~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~a~~~ 326 (340)
T cd05284 290 WGT---RAELVEVVALAESGKVKVEITKFPLEDANEALDR 326 (340)
T ss_pred ccc---HHHHHHHHHHHHhCCCCcceEEEeHHHHHHHHHH
Confidence 443 577899999999998864 66788887777654
No 38
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=3.2e-41 Score=325.85 Aligned_cols=318 Identities=27% Similarity=0.378 Sum_probs=268.2
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC------C-CCCCccccCcccEEEEEeCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP------K-LPLPVIFGHEAVGVVESVGE 88 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~------~-~~~p~~~G~e~~G~V~~vG~ 88 (373)
|||+++.+++. +++++.+.|++.+++|+||+.+++||++|+..+.|..... . ..+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 79999999887 9999999999999999999999999999999887753110 0 03577899999999999999
Q ss_pred CCC--ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC--CCCCccccccCCceecccccccceeeeEEee
Q 017335 89 YVE--EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP--RDGTSRFRELKGDVIHHFLNISSFTEYSVVD 164 (373)
Q Consensus 89 ~v~--~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~--~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~ 164 (373)
.++ +|++||+|+..+..+|+.|+.|+.|.+++|..... .|+. .+| +|++|+.++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~g-------------------~~~~~~~~~ 137 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNNVNG-------------------GMAEYMRFP 137 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccCCCC-------------------cceeeEEcc
Confidence 999 89999999999999999999999999999975432 3332 344 999999999
Q ss_pred cc-ceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335 165 IT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (373)
Q Consensus 165 ~~-~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~ 243 (373)
++ .++++|+++++++++.+ .+++|+|.++ +...++++++|+|.|+|++|++++++|+.+|+..|+++++++++.+.+
T Consensus 138 ~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~ 215 (350)
T cd08256 138 KEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA 215 (350)
T ss_pred cccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHH
Confidence 88 67899999999999988 7999999976 788899999999977899999999999999986788899999999999
Q ss_pred HHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH--
Q 017335 244 KKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-- 320 (373)
Q Consensus 244 ~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-- 320 (373)
+++|++++++.+. .++.+.+.+++++ ++|++||++|....+..++++++++ |+++.+|..... .+++...+
T Consensus 216 ~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~ 289 (350)
T cd08256 216 RKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP--VTVDWSIIGD 289 (350)
T ss_pred HHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC--CccChhHhhc
Confidence 9999999998876 7788888888877 8999999999766688999999997 999999875432 33444333
Q ss_pred hhCcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 321 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
.+++++.++.... ..+.++++++++|.+++ +.|+++++.+++..
T Consensus 290 ~~~~~i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~ 338 (350)
T cd08256 290 RKELDVLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFEL 338 (350)
T ss_pred ccccEEEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHH
Confidence 2378888875443 46889999999998875 55788888877654
No 39
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=7e-41 Score=325.18 Aligned_cols=345 Identities=38% Similarity=0.644 Sum_probs=284.4
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++..++.++++++++.|++++++|+|||.++++|+.|+..+.+..+. .+|.++|||++|+|+++|++++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~~ 77 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA---PLPAVLGHEGAGVVEEVGPGVTGVKP 77 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC---CCCccccccceEEEEEeCCCccccCC
Confidence 799999998777999999999999999999999999999999988876542 56789999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||+|+..+...|++|.+|+.++.+.|+..... -+|...+|+.++ ..-|.....++..|+|++|+.++++.++++|+++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~ 155 (363)
T cd08279 78 GDHVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRF-TADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDI 155 (363)
T ss_pred CCEEEECCCCCCCCChhhcCCCcccCcccccc-cccccCCCcccc-cccCccccccccCccceeeEEeccccEEECCCCC
Confidence 99999999999999999999999999764310 011111111111 0001111112234599999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~ 255 (373)
++++++.+++.+.+||.++.+...++++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|++++++.+
T Consensus 156 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~ 235 (363)
T cd08279 156 PLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS 235 (363)
T ss_pred ChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence 99999999999999999888888899999999998899999999999999995599999999999999999999999887
Q ss_pred CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG 333 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 333 (373)
. .++...+.+++++ ++|+++|++++...+..++++++++ |+++.+|.........++...+.. +.++.++.++.
T Consensus 236 ~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (363)
T cd08279 236 E---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS 311 (363)
T ss_pred C---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence 7 6788888888765 8999999999777689999999997 999999875433455667776665 78888876655
Q ss_pred CCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
....+.+++++++++++++++ +.|+++++.++++.+
T Consensus 312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~ 352 (363)
T cd08279 312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADM 352 (363)
T ss_pred cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHH
Confidence 445688999999999999874 457888888776553
No 40
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.4e-40 Score=326.44 Aligned_cols=333 Identities=18% Similarity=0.163 Sum_probs=273.2
Q ss_pred CCCCCcccceeeEEeecC--C---CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC--------CCCCCc
Q 017335 7 SPKAGKVIRCKAAICRIP--G---KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--------KLPLPV 73 (373)
Q Consensus 7 ~~~~~~~~~~ka~~~~~~--~---~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~--------~~~~p~ 73 (373)
.|.+-.|.+|||+++..+ + +.++++++|.|.++++||+||+.+++||++|++.+.+..... ....+.
T Consensus 4 ~~~~~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~ 83 (393)
T cd08246 4 PPLGVVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYH 83 (393)
T ss_pred CCCCcCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcc
Confidence 355668999999998632 2 237899999999999999999999999999998877652100 001235
Q ss_pred cccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccc
Q 017335 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFL 152 (373)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~ 152 (373)
++|||++|+|+++|++++.+++||+|++.+...|++|..|..+.+++|..... +|+. .+|
T Consensus 84 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~~g---------------- 144 (393)
T cd08246 84 IGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETNYG---------------- 144 (393)
T ss_pred ccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCCCC----------------
Confidence 89999999999999999999999999999999999999999999999986543 4432 234
Q ss_pred cccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHH--hCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCe
Q 017335 153 NISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASK 229 (373)
Q Consensus 153 ~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~--~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~ 229 (373)
+|++|+.++...++++|+++++++++.+.+++.|||+++... ..++++++|+|+|+ |++|++++++|+.+|+ +
T Consensus 145 ---~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~ 220 (393)
T cd08246 145 ---SFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-N 220 (393)
T ss_pred ---cceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-e
Confidence 999999999999999999999999999999999999987654 67899999999998 9999999999999999 7
Q ss_pred EEEEcCChhHHHHHHHcCCceEEcCCCCC-------------------CccHHHHHHHhcCC--CccEEEECCCCHHHHH
Q 017335 230 IIGVDINPEKFEIGKKFGITDFINPATCG-------------------DKTVSQVIKEMTDG--GADYCFECIGLTSVMN 288 (373)
Q Consensus 230 Vi~~~~~~~~~~~~~~lga~~vi~~~~~~-------------------~~~~~~~i~~~~~~--~~d~vid~~g~~~~~~ 288 (373)
++++++++++.+.++++|++++++.++.. ...+.+.+.+++++ ++|++||++|+.. ++
T Consensus 221 vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~ 299 (393)
T cd08246 221 PVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FP 299 (393)
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HH
Confidence 88889999999999999999999875410 01356777788776 6999999999754 89
Q ss_pred HHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCc
Q 017335 289 DAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNS 364 (373)
Q Consensus 289 ~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~ 364 (373)
.++++++++ |+++.+|.... ...+++...+.. +.++.++.... .+++.+++++++++.+.+ +.|+++++++
T Consensus 300 ~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 374 (393)
T cd08246 300 TSVFVCDRG-GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDPCLSKVFSLDETPD 374 (393)
T ss_pred HHHHHhccC-CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCceeeeeEEEeHHHHHH
Confidence 999999997 99999987432 234455555555 88888886544 467889999999998864 6788888887
Q ss_pred cccc
Q 017335 365 DSAG 368 (373)
Q Consensus 365 a~~~ 368 (373)
++..
T Consensus 375 a~~~ 378 (393)
T cd08246 375 AHQL 378 (393)
T ss_pred HHHH
Confidence 7654
No 41
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2.3e-40 Score=324.16 Aligned_cols=335 Identities=25% Similarity=0.336 Sum_probs=271.2
Q ss_pred eeeEEeecCCCCeEEEEEecCCCC-CCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++.++++ +++++++.|.|. +++|+||+.+++||++|+..+.|.++.. .+|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM--KKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC--CCCccccccceEEEEEeCCCCCCCC
Confidence 79999998866 999999999884 9999999999999999999998876554 5788999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCC-CCC---CCCCCCccccccCCceecccccccceeeeEEeecc--ce
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGY-RPN---MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HV 168 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~~g---~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~ 168 (373)
+||+|++.+...|++|.+|+.+.+++|++..... ..+ ....|..++ ... .....|+|++|+.++.+ .+
T Consensus 78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~g~~~~~~~v~~~~~~~ 151 (386)
T cd08283 78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGY-----SHL-TGGYAGGQAEYVRVPFADVGP 151 (386)
T ss_pred CCCEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccccccc-----ccc-cCCCCCeeEEEEEcccccCeE
Confidence 9999999999999999999999999998754320 000 000000000 000 00013599999999988 89
Q ss_pred EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (373)
Q Consensus 169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 248 (373)
+++|+++++++++.++..++|||+++ +...++++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.+++++.
T Consensus 152 ~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~ 230 (386)
T cd08283 152 FKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLG 230 (386)
T ss_pred EECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence 99999999999999999999999987 88889999999999889999999999999998569999999999999999854
Q ss_pred ceEEcCCCCCCc-cHHHHHHHhcCC-CccEEEECCCCH---------------------HHHHHHHHHhccCCceEEEEc
Q 017335 249 TDFINPATCGDK-TVSQVIKEMTDG-GADYCFECIGLT---------------------SVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 249 ~~vi~~~~~~~~-~~~~~i~~~~~~-~~d~vid~~g~~---------------------~~~~~~~~~l~~~~G~~v~~G 305 (373)
..+++... . ++.+.+.+++++ ++|++||++|+. ..+..++++++++ |+++.+|
T Consensus 231 ~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g 306 (386)
T cd08283 231 AETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIG 306 (386)
T ss_pred cEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEc
Confidence 46887765 4 488888888877 899999999753 3588899999997 9999999
Q ss_pred ccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 306 VEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 306 ~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
..... ...++....+. ++++.++... ..+.+.+++++++++++.+ +.|+++++.++++.
T Consensus 307 ~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~ 371 (386)
T cd08283 307 VYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKI 371 (386)
T ss_pred CCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHH
Confidence 75432 33455534444 8888887432 2577999999999999975 55788888777653
No 42
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.5e-40 Score=320.25 Aligned_cols=323 Identities=31% Similarity=0.420 Sum_probs=270.3
Q ss_pred eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++.+++. +++.+.|.|.| +++||+|||.++++|++|+..+.+.++.. .+|.++|||++|+|+++|+++++++
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGA--KHGMILGHEFVGEVVEVGSDVKRLK 77 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCC--CCCceeccceEEEEEEECCCccccC
Confidence 68999999877 89999999999 89999999999999999999988876654 6789999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP 172 (373)
+||+|+..+...|+.|.+|..|.+.+|+.....-..+...+| +|++|++++.+ .++++|
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP 138 (347)
T cd05278 78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDG-------------------GQAEYVRVPYADMNLAKIP 138 (347)
T ss_pred CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCC-------------------eeeEEEEecchhCeEEECC
Confidence 999999999999999999999999999875532111222234 99999999987 999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
+++++++++.++..+.|||+++ ....++++++|||.|+|++|++++|+|+.+|+.+|+++++++++.+.++++|+++++
T Consensus 139 ~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi 217 (347)
T cd05278 139 DGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDII 217 (347)
T ss_pred CCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEE
Confidence 9999999999999999999976 778899999999988899999999999999965789998899999999999999999
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeec
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 331 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (373)
+++. .++.+.+...+++ ++|++||++++...+..++++++++ |+++.+|..............+.+++++.++..
T Consensus 218 ~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (347)
T cd05278 218 NPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLV 293 (347)
T ss_pred cCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeecc
Confidence 9887 6788888888776 8999999999865689999999997 999999864332211122222234778777643
Q ss_pred CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
.. .+.+.++++++.++++.+ +.|+++++.+++..
T Consensus 294 ~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ 332 (347)
T cd05278 294 PV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRL 332 (347)
T ss_pred Cc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHH
Confidence 32 578999999999998874 44677777776543
No 43
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=3.5e-40 Score=317.74 Aligned_cols=322 Identities=26% Similarity=0.416 Sum_probs=276.0
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++.+++.++++++.+.|.+.+++|+||+.++++|++|+....|..+.. .+|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~~~~~~~ 78 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV--TLPHVPGHEFAGVVVEVGEDVSRWRV 78 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCC--CCCeeeccceeEEEEEECCCCccCCC
Confidence 7999999887779999999999999999999999999999999888876543 56889999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP 173 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP~ 173 (373)
||+|+..+..+|++|.+|..|..++|+++.. .|+..+| +|++|+.+++. .++++|+
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~iP~ 136 (345)
T cd08260 79 GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHPG-------------------SFAEYVAVPRADVNLVRLPD 136 (345)
T ss_pred CCEEEECCCCCCCCCccccCcCcccCCCCcc---cccCCCC-------------------cceeEEEcccccCceEECCC
Confidence 9999987778899999999999999998753 4555556 89999999975 9999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
++++++++.++..++|||+++.+..++.++++|+|+|+|++|++++++|+..|+ +|+++.+++++.+.++++|++++++
T Consensus 137 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~ 215 (345)
T cd08260 137 DVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN 215 (345)
T ss_pred CCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEc
Confidence 999999999999999999987778889999999999999999999999999999 8999999999999999999999998
Q ss_pred CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCc-cccCHHHHhh-CcEEEEeec
Q 017335 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP-ISLNSIEILK-GRSVCGTYF 331 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~-~~~~~~~~~~-~~~i~g~~~ 331 (373)
.+. +.++.+.+..+.++++|++|||+|+...+..++++++++ |+++.+|....... .+++...++. +.++.+...
T Consensus 216 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08260 216 ASE--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHG 292 (345)
T ss_pred ccc--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCc
Confidence 763 246667777776658999999999766688999999997 99999997543322 4556655544 888888754
Q ss_pred CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
. ..+.+++++++++++++.+ +.++++++.++++.
T Consensus 293 ~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~ 331 (345)
T cd08260 293 M---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAA 331 (345)
T ss_pred C---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHH
Confidence 3 2578999999999998864 55777777776654
No 44
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2e-40 Score=320.20 Aligned_cols=322 Identities=28% Similarity=0.415 Sum_probs=272.5
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC----------CCCCCCccccCcccEEEEE
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL----------PKLPLPVIFGHEAVGVVES 85 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----------~~~~~p~~~G~e~~G~V~~ 85 (373)
|||+++..++.+++++++|.|+++++||+|++.++++|++|+..+.+.++. ....+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 799999988877999999999999999999999999999999988875431 0014567899999999999
Q ss_pred eCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 017335 86 VGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (373)
Q Consensus 86 vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (373)
+|++++++++||+|++.+...|++|..|.++.+++|....+ .|....| +|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQDG-------------------GYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeeccC-------------------cceeeEEecH
Confidence 99999999999999999999999999999999999977644 3333445 8999999999
Q ss_pred cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (373)
Q Consensus 166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~ 245 (373)
+.++++|+++++.+++.+.+.+.|||+++.+...+.++++|||+|+|++|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999987766667789999999889999999999999999779999999999999999
Q ss_pred cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCc
Q 017335 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGR 324 (373)
Q Consensus 246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~ 324 (373)
+|++.+++.+. .++.+.+.+..++++|++||++|....+..++++|+++ |+++.+|........... .+. ++.
T Consensus 219 ~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~--~~~~~~~ 292 (350)
T cd08240 219 AGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLP--LLPLRAL 292 (350)
T ss_pred hCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHH--HHhhcCc
Confidence 99999998876 67777777776658999999999777799999999997 999999875443222322 233 488
Q ss_pred EEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 325 SVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 325 ~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
++.++.... .+++.+++++++++.++. ..|+++++.++++.
T Consensus 293 ~i~~~~~~~---~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~ 336 (350)
T cd08240 293 TIQGSYVGS---LEELRELVALAKAGKLKPIPLTERPLSDVNDALDD 336 (350)
T ss_pred EEEEcccCC---HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHH
Confidence 888876544 478999999999998764 66778777777654
No 45
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=2.2e-40 Score=314.75 Aligned_cols=289 Identities=16% Similarity=0.195 Sum_probs=229.4
Q ss_pred ceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeecc-ccchhcccCCCCCCC-CCCCccccCcccEEEEEeCCCCCc
Q 017335 15 RCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLC-HSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 15 ~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~-~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
+|||+++.+++. +++++.|.|+|+++||||||.++||| ++|++.+.|.++... ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 589999998876 99999999999999999999999996 799998888754321 1579999999999999999998 6
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
|++||||++.+ ..|..|.. | .+| +|+||+.+|++.++++|
T Consensus 79 ~~vGdrV~~~~----~~c~~~~~---------------~--~~G-------------------~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVPG----SNCYEDVR---------------G--LFG-------------------GASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEeC----cccccccc---------------c--cCC-------------------cccceEEcCHHHceeCC
Confidence 99999998742 23333211 1 124 99999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++++. ++++ .+.|||+++.+ . ..++++|||+|+|++|++++|+||.+|++.|++++.++++++.+++ .+++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---cccc
Confidence 9999864 5555 67899997644 3 3468899999999999999999999999667778888777766654 3455
Q ss_pred cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF 331 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 331 (373)
|+.+ . .+.++|+||||+|+..+++.++++++++ |+++++|.... ..+++...++. ++++.++..
T Consensus 192 ~~~~---~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~ 256 (308)
T TIGR01202 192 DPEK---D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAE 256 (308)
T ss_pred Chhh---c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEecc
Confidence 5432 1 1238999999999987789999999997 99999998543 34555555555 889988754
Q ss_pred CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccccc
Q 017335 332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGLL 370 (373)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~l 370 (373)
.. .++++++++++++|++++ +.|+++++++|+..++
T Consensus 257 ~~---~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~ 297 (308)
T TIGR01202 257 WQ---PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAF 297 (308)
T ss_pred cc---hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHh
Confidence 33 578999999999999974 6788999999887543
No 46
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.1e-39 Score=314.30 Aligned_cols=319 Identities=28% Similarity=0.370 Sum_probs=273.0
Q ss_pred eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++.+++. +++++.+.|+| .++||+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV--TPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC--CCCceecccceEEEEEeccCccccC
Confidence 78999998887 99999999986 89999999999999999999998876544 5688999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP 172 (373)
+||+|++.+...|+.|.+|..+.++.|...... .|...+| +|++|+.++.+ .++++|
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-------------------~~~~~~~v~~~~~~~~~lp 136 (345)
T cd08286 78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLIDG-------------------TQAEYVRIPHADNSLYKLP 136 (345)
T ss_pred CCCEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccCC-------------------eeeeEEEcccccCceEECC
Confidence 999999999999999999999999999876542 2333445 99999999987 999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
+++++.+++.++..+++||.++.....+.++++|||.|+|++|++++|+|+.+|..+|+++++++++.+.++++|+++++
T Consensus 137 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v 216 (345)
T cd08286 137 EGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTV 216 (345)
T ss_pred CCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCcee
Confidence 99999999999999999998777788899999999998899999999999999944899999999999999999999999
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (373)
+++. .++...+.+++++ ++|++|||+|....++.+++.++++ |+++.+|.... ..+++...++. ++++.+..
T Consensus 217 ~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (345)
T cd08286 217 NSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGL 290 (345)
T ss_pred cccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeec
Confidence 9876 6777788887776 8999999999877789999999997 99999996432 34566666444 88988753
Q ss_pred cCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 331 FGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
.. .+.+.+++++++++.+++ +.|+++++.++++.
T Consensus 291 ~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~ 329 (345)
T cd08286 291 VD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDT 329 (345)
T ss_pred Cc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHH
Confidence 22 256888999999998864 55788888777543
No 47
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.4e-39 Score=305.02 Aligned_cols=255 Identities=21% Similarity=0.368 Sum_probs=216.0
Q ss_pred cccCcccEEEEEeCCCCC------ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-------CCCCccc
Q 017335 74 IFGHEAVGVVESVGEYVE------EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-------RDGTSRF 140 (373)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-------~~G~~~~ 140 (373)
++|||++|+|+++|++|+ ++++||||++.+...|+.|.+|+.|++++|++... .|.. .+|
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~~~~~~G---- 73 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDSGWPLSG---- 73 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccCCccccc----
Confidence 589999999999999999 89999999999999999999999999999987553 2322 234
Q ss_pred cccCCceecccccccceeeeEEeecc-ceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHH
Q 017335 141 RELKGDVIHHFLNISSFTEYSVVDIT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVA 219 (373)
Q Consensus 141 ~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~ 219 (373)
+|+||+.+|+. .++++|+++++++++.+++.+.|+|+++ +.....++++|||+|+|++|++++
T Consensus 74 ---------------~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~ 137 (280)
T TIGR03366 74 ---------------GYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAA 137 (280)
T ss_pred ---------------cceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHH
Confidence 99999999997 7999999999999999999999999965 555667999999999999999999
Q ss_pred HHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCC
Q 017335 220 EGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGW 298 (373)
Q Consensus 220 ~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~ 298 (373)
|+||.+|+++|++++++++|++.++++|++++++.+. ..+.+.+++++ ++|++||++|.+..++.++++++++
T Consensus 138 ~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~- 211 (280)
T TIGR03366 138 AAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG- 211 (280)
T ss_pred HHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-
Confidence 9999999955999999999999999999999998654 24556667666 8999999999888899999999997
Q ss_pred ceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcC--CCCCCccccc
Q 017335 299 GKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDK--VHLRSSFHLC 360 (373)
Q Consensus 299 G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g--~i~~~~~~~~ 360 (373)
|+++.+|........+++...++. +++++|+..+. .++++++++++.++ +++++++..+
T Consensus 212 G~iv~~G~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~ 273 (280)
T TIGR03366 212 GTAVLAGSVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGK 273 (280)
T ss_pred CEEEEeccCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhc
Confidence 999999975433455777777776 99999986433 57899999999984 5554444333
No 48
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=3.8e-39 Score=316.82 Aligned_cols=328 Identities=20% Similarity=0.186 Sum_probs=267.5
Q ss_pred cccceeeEEeec--CCC---CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC--------CCCCCC-ccccC
Q 017335 12 KVIRCKAAICRI--PGK---PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL--------PKLPLP-VIFGH 77 (373)
Q Consensus 12 ~~~~~ka~~~~~--~~~---~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~--------~~~~~p-~~~G~ 77 (373)
+|.+|||+++.. .+. .+++.++|.|.|++++|+||+.++++|++|++...+.... .....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 678899999965 443 3899999999999999999999999999998766553210 000123 37999
Q ss_pred cccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccc
Q 017335 78 EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISS 156 (373)
Q Consensus 78 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~ 156 (373)
|++|+|+++|++++.+++||+|++.+...|++|+.|+.|.+++|..... .|.. .+| +
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~g-------------------~ 141 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNFG-------------------S 141 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCCc-------------------c
Confidence 9999999999999999999999999999999999999999999976432 2321 234 9
Q ss_pred eeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHH--HhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE
Q 017335 157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (373)
Q Consensus 157 ~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~--~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~ 233 (373)
|++|+.++.+.++++|+++++++++.+.+.+.|||.++.. ...++++++|+|+|+ |++|++++++|+.+|+ +++++
T Consensus 142 ~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~ 220 (398)
T TIGR01751 142 FAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAV 220 (398)
T ss_pred ceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEE
Confidence 9999999999999999999999999999999999997654 467899999999998 9999999999999999 78888
Q ss_pred cCChhHHHHHHHcCCceEEcCCCCC-------------------CccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHH
Q 017335 234 DINPEKFEIGKKFGITDFINPATCG-------------------DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNS 293 (373)
Q Consensus 234 ~~~~~~~~~~~~lga~~vi~~~~~~-------------------~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~ 293 (373)
++++++.+.++++|+++++|++++. ...+.+.+.+++++ ++|++|||+|... +..++++
T Consensus 221 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~ 299 (398)
T TIGR01751 221 VSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFV 299 (398)
T ss_pred cCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHh
Confidence 8899999999999999999876410 01355667777776 8999999999754 8899999
Q ss_pred hccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 294 SREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 294 l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
++++ |+++.+|.... ...+++...+.. +.++.++.++. ..++.+++++++++++.+ +.|+++++++++..
T Consensus 300 l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~ 373 (398)
T TIGR01751 300 CRRG-GMVVICGGTTG-YNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQD 373 (398)
T ss_pred hccC-CEEEEEccccC-CCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHH
Confidence 9997 99999997533 234555555555 78888876554 456789999999998874 67788888777654
No 49
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=9.5e-39 Score=310.62 Aligned_cols=342 Identities=32% Similarity=0.511 Sum_probs=275.1
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc---
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE--- 92 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 92 (373)
|||+++.+++.++++++.|.|.++++||+||+.++++|++|+..+.+..+. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~p~~~g~e~~G~v~~vG~~~~~~~~ 77 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF---PPPFVLGHEISGEVVEVGPNVENPYG 77 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC---CCCcccccccceEEEEeCCCCCCCCc
Confidence 789999998777999999999999999999999999999999988876543 57789999999999999999988
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCC-CCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l 171 (373)
|++||+|+..+...|+.|.+|.-+.+++|+...+ .+..|...+|-..+....+++.. .+..|+|++|+.++.+.++++
T Consensus 78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 78 LSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred CCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEEC
Confidence 9999999998888999999999999999987541 11111111110000000000000 012358999999999999999
Q ss_pred CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
|+++++.+++.++..++|||.++.+...+.++++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++++
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v 236 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT 236 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceE
Confidence 99999999999999999999988777788999999999889999999999999999449999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEe
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGT 329 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~ 329 (373)
++.+. .++..++.+.+++ ++|+|||++++......++++++++ |+++.+|.........++...++ +++++.++
T Consensus 237 ~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (367)
T cd08263 237 VNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGS 312 (367)
T ss_pred ecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEec
Confidence 99887 6788888888766 8999999999874589999999997 99999986543333456666654 48888875
Q ss_pred ecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335 330 YFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSA 367 (373)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~ 367 (373)
... ...+.+.+++++++++++.+ +.|+++++.++++
T Consensus 313 ~~~--~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~ 353 (367)
T cd08263 313 YGA--RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYE 353 (367)
T ss_pred CCC--CcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHH
Confidence 322 22578999999999999875 4477777776654
No 50
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.4e-39 Score=309.29 Aligned_cols=314 Identities=27% Similarity=0.357 Sum_probs=266.1
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++.++++++++++.|.|.++++|++|++.++++|++|+....|..+.. .+|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM--KYPVILGHEVVGTVEEVGENVKGFKP 78 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC--CCCeeccccceEEEEEeCCCCccCCC
Confidence 7899999998889999999999999999999999999999999888865544 56789999999999999999988999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||+|++.....|+.|.+|..+.+++|..... .|...+| +|++|+.++.+.++++|+++
T Consensus 79 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~ 136 (334)
T PRK13771 79 GDRVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNV 136 (334)
T ss_pred CCEEEECCCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCC
Confidence 9999999888999999999999999988654 4544556 99999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
++.+++.+++.+.+||.++.+. .++++++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++++ ++++++.
T Consensus 137 ~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~ 213 (334)
T PRK13771 137 SDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVG 213 (334)
T ss_pred CHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCc
Confidence 9999999999999999977555 8999999999998 9999999999999999 899999999999999888 7777754
Q ss_pred CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG 333 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 333 (373)
+ ++.+.+.++ +++|+++||+|+.. ...++++++++ |+++.+|..+....++++...++. +.++.+....
T Consensus 214 ~-----~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 283 (334)
T PRK13771 214 S-----KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA- 283 (334)
T ss_pred h-----hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC-
Confidence 3 345555554 37999999999865 88999999997 999999975433222233333333 8888887422
Q ss_pred CCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
.+++++++++++++++++. +.|+++++.+++..
T Consensus 284 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 319 (334)
T PRK13771 284 --TKRDVEEALKLVAEGKIKPVIGAEVSLSEIDKALEE 319 (334)
T ss_pred --CHHHHHHHHHHHHcCCCcceEeeeEcHHHHHHHHHH
Confidence 3688999999999998864 67888888887654
No 51
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=9.6e-39 Score=306.78 Aligned_cols=315 Identities=30% Similarity=0.495 Sum_probs=267.3
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||++++.++. +++.+++.|.++++||+|+|.++++|+.|+....+..+.. .+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA--SYPRILGHELSGEVVEVGEGVAGLKV 77 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC--CCCcccccccEEEEEEeCCCCCCCCC
Confidence 78999998876 9999999999999999999999999999999888776544 46788999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||+|+..+...|+.|..|+.++++.|.+... .++...| +|++|+.++++ ++++|+++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~-~~~~p~~~ 134 (337)
T cd08261 78 GDRVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRDG-------------------GFAEYIVVPAD-ALLVPEGL 134 (337)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCCC-------------------cceeEEEechh-eEECCCCC
Confidence 9999998888999999999999999965432 3333345 89999999999 99999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~ 255 (373)
++++++++ ..+++++.++ +...++++++|||+|+|.+|.+++++|+.+|+ +|+++.+++++.+.++++|++++++++
T Consensus 135 ~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~ 211 (337)
T cd08261 135 SLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG 211 (337)
T ss_pred CHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc
Confidence 99999877 4778888865 77889999999999889999999999999999 899999899999999999999999988
Q ss_pred CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG 333 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 333 (373)
. .++.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|... ....++...+.. ++++.+..
T Consensus 212 ~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~--- 282 (337)
T cd08261 212 D---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSR--- 282 (337)
T ss_pred c---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEec---
Confidence 7 6788888888776 8999999998877789999999997 9999998643 233455555554 78887763
Q ss_pred CCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
....+.+.++++++++|++.+ ..++++++.++++.
T Consensus 283 ~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~ 322 (337)
T cd08261 283 NATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDL 322 (337)
T ss_pred cCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHH
Confidence 223567899999999999875 44667777666543
No 52
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=5.8e-39 Score=308.86 Aligned_cols=320 Identities=25% Similarity=0.378 Sum_probs=262.5
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC-CCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||++++.++++.+++.+.|.|.|+++||+||+.++++|++|+..+.+.. ......+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999888779999999999999999999999999999998766532 111114678999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|+..+...|+.|.+|+.+.+++|++..+ .+...+| +|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG-------------------AFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------------cceeeEEechHHeEECcCC
Confidence 99999999999999999999999999987643 4444556 9999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
+++++++.+ ..+.+++.++.. ...+|++|+|.|+|++|++++++|+.+|+++|+++++++++.+.++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 999988755 466666654432 34689999999889999999999999999668888889999999999999999988
Q ss_pred CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (373)
+. .++.+.+.+++++ ++|+||||.|+...++.++++++++ |+++.+|.... ..+++...+.. ++++.++...
T Consensus 216 ~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~ 289 (341)
T PRK05396 216 AK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPG--DMAIDWNKVIFKGLTIKGIYGR 289 (341)
T ss_pred cc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CCcccHHHHhhcceEEEEEEcc
Confidence 77 6788888888776 8999999999887799999999997 99999997543 23344445555 7888876522
Q ss_pred CCCchhHHHHHHHHHHcC-CCC---CCcccccCCCccccc
Q 017335 333 GLKPRSDIATLAQKYLDK-VHL---RSSFHLCDPNSDSAG 368 (373)
Q Consensus 333 ~~~~~~~~~~~~~~~~~g-~i~---~~~~~~~~~~~a~~~ 368 (373)
. ..+.+.++++++.++ ++. .+.|+++++.+++..
T Consensus 290 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~ 327 (341)
T PRK05396 290 E--MFETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEA 327 (341)
T ss_pred C--ccchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHH
Confidence 2 235567788999888 332 266778877777644
No 53
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=3.1e-39 Score=308.69 Aligned_cols=296 Identities=19% Similarity=0.213 Sum_probs=246.7
Q ss_pred eeeEEeecCCC-----CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335 16 CKAAICRIPGK-----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (373)
Q Consensus 16 ~ka~~~~~~~~-----~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (373)
|||+++.+++. .+++.++|.|.|+++||+||+.++++|++|+..+.|..+... .+|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~-~~p~v~G~e~~G~V~~vG~~v 79 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTK-ALPVPPGFEGSGTVVAAGGGP 79 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCC-CCCcCCCcceEEEEEEECCCc
Confidence 78999998874 378889999999999999999999999999998888654322 578899999999999999999
Q ss_pred Cc-cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceE
Q 017335 91 EE-VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVV 169 (373)
Q Consensus 91 ~~-~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~ 169 (373)
++ |++||+|+.... .+| +|++|+.+|++.++
T Consensus 80 ~~~~~vGd~V~~~~~-----------------------------~~g-------------------~~a~~~~v~~~~~~ 111 (324)
T cd08291 80 LAQSLIGKRVAFLAG-----------------------------SYG-------------------TYAEYAVADAQQCL 111 (324)
T ss_pred cccCCCCCEEEecCC-----------------------------CCC-------------------cchheeeecHHHeE
Confidence 96 999999985321 023 89999999999999
Q ss_pred EcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEE-C-CChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335 170 KITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIF-G-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (373)
Q Consensus 170 ~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~-G-~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 247 (373)
++|+++++++++.+++...|||. +.+.... ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++.+.++++|
T Consensus 112 ~iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g 188 (324)
T cd08291 112 PLPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIG 188 (324)
T ss_pred ECCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcC
Confidence 99999999999988888899986 4555555 55666665 4 49999999999999999 8999999999999999999
Q ss_pred CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcE
Q 017335 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRS 325 (373)
Q Consensus 248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~ 325 (373)
++++++++. .++.+.+++.+++ ++|++||++|+.. ....+++++++ |+++.+|.........++...++. +++
T Consensus 189 ~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 263 (324)
T cd08291 189 AEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKS 263 (324)
T ss_pred CcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcE
Confidence 999999887 7888899888877 8999999999877 77889999997 999999974332222354555555 899
Q ss_pred EEEeecCCCC---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 326 VCGTYFGGLK---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 326 i~g~~~~~~~---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
+.++....+. ..+++++++++++ +++++ +.|+++++.+|++.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~ 312 (324)
T cd08291 264 IEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFY 312 (324)
T ss_pred EEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHH
Confidence 9998765532 2467888999988 88876 789999999998754
No 54
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.1e-38 Score=306.86 Aligned_cols=319 Identities=26% Similarity=0.358 Sum_probs=264.8
Q ss_pred eeeEEeecCCCCeEEEEEecCCCC-CCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++.+++. +++++++.|.|. ++||+||+.++++|+.|+..+.|.++. .+|.++|||++|+|+++|+++++++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (344)
T cd08284 1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS---TPGFVLGHEFVGEVVEVGPEVRTLK 76 (344)
T ss_pred CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC---CCCcccccceEEEEEeeCCCccccC
Confidence 68999988765 999999999985 999999999999999999888776542 4678999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCC-CCCCCCccccccCCceecccccccceeeeEEeecc--ceEEc
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPN-MPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKI 171 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g-~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~l 171 (373)
+||+|+..+...|++|.+|.++++++|++.......+ ...+ |+|++|+.++++ .++++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------g~~~~~~~v~~~~~~~~~~ 137 (344)
T cd08284 77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLD-------------------GAQAEYVRVPFADGTLLKL 137 (344)
T ss_pred CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCC-------------------CceeEEEEcccccCceEEC
Confidence 9999999998999999999999999998754310001 0113 489999999865 99999
Q ss_pred CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
|+++++++++.++..++|||+++ ....+.++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|+. +
T Consensus 138 p~~l~~~~a~~l~~~~~ta~~~~-~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~ 215 (344)
T cd08284 138 PDGLSDEAALLLGDILPTGYFGA-KRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-P 215 (344)
T ss_pred CCCCCHHHhhhhcCchHHHHhhh-HhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-E
Confidence 99999999999999999999976 457889999999998899999999999999975799998899999999999985 5
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT 329 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 329 (373)
++.+. .++...+.+++++ ++|++||++++...+..++++++++ |+++.+|.... ...+.+....+. ++++.+.
T Consensus 216 ~~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 290 (344)
T cd08284 216 INFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTA-EEFPFPGLDAYNKNLTLRFG 290 (344)
T ss_pred EecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCC-CCccccHHHHhhcCcEEEEe
Confidence 66655 5788888888876 8999999999877799999999997 99999997542 233444444444 8888765
Q ss_pred ecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335 330 YFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSA 367 (373)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~ 367 (373)
. ....+.+.+++++++++++.+ +.|+++++.+++.
T Consensus 291 ~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~ 330 (344)
T cd08284 291 R---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYR 330 (344)
T ss_pred c---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHH
Confidence 2 123578999999999999864 5577777776654
No 55
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=5.5e-39 Score=306.70 Aligned_cols=310 Identities=26% Similarity=0.367 Sum_probs=259.4
Q ss_pred eeeEEeecCC-CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+. ... .+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~--~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVK--PMPHIPGAEFAGVVEEVGDHVKGVK 77 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCC--CCCeecccceeEEEEEECCCCCCCC
Confidence 7899998766 34888888888899999999999999999999887642 222 4577899999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|++.+...|++|.+|+.|.+++|.++.+ .|+..+| +|++|+.++++.++++|++
T Consensus 78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~ 135 (325)
T cd08264 78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDS 135 (325)
T ss_pred CCCEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCC
Confidence 99999999999999999999999999987653 4544455 8999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
+++++++.+++.+.+||+++. ..+++++++|+|+|+ |++|++++++|+.+|+ +|+++.+ .+.++++|++++++
T Consensus 136 ~~~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~ 209 (325)
T cd08264 136 ISDELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVD 209 (325)
T ss_pred CCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeec
Confidence 999999999999999999764 488999999999998 9999999999999999 7888863 36677899999987
Q ss_pred CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (373)
.+. ..+.+.+++ +++|+|+|++|.. .+..++++++++ |+++.+|.. .....+++...+.. +.++.++..+
T Consensus 210 ~~~-----~~~~l~~~~-~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (325)
T cd08264 210 YDE-----VEEKVKEIT-KMADVVINSLGSS-FWDLSLSVLGRG-GRLVTFGTL-TGGEVKLDLSDLYSKQISIIGSTGG 280 (325)
T ss_pred chH-----HHHHHHHHh-CCCCEEEECCCHH-HHHHHHHhhccC-CEEEEEecC-CCCCCccCHHHHhhcCcEEEEccCC
Confidence 654 345566666 6899999999975 599999999997 999999874 22335667777666 8888887655
Q ss_pred CCCchhHHHHHHHHHHcCCCCC-CcccccCCCccccc
Q 017335 333 GLKPRSDIATLAQKYLDKVHLR-SSFHLCDPNSDSAG 368 (373)
Q Consensus 333 ~~~~~~~~~~~~~~~~~g~i~~-~~~~~~~~~~a~~~ 368 (373)
. ++.+.++++++...++.. +.|++++++++++.
T Consensus 281 ~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~ 314 (325)
T cd08264 281 T---RKELLELVKIAKDLKVKVWKTFKLEEAKEALKE 314 (325)
T ss_pred C---HHHHHHHHHHHHcCCceeEEEEcHHHHHHHHHH
Confidence 4 578999999997666433 77888888887654
No 56
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=6.9e-39 Score=308.03 Aligned_cols=321 Identities=24% Similarity=0.335 Sum_probs=267.0
Q ss_pred eeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCC
Q 017335 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER 96 (373)
Q Consensus 17 ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 96 (373)
|+++.+.++..+++++++.|+|+++||+||+.++++|++|+..+.+..... .+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPT--KYPLVPGHEIVGIVVAVGSKVTKFKVG 78 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCC--CCCcccCcceeeEEEEECCCCcccCCC
Confidence 578888888779999999999999999999999999999999988876443 578899999999999999999999999
Q ss_pred CEEEee-CCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 97 DLVLPI-FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 97 d~V~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
|+|++. ....|++|.+|..+.+++|+.....+ .|....| .+..|+|++|+.++.+.++++|+++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~ 143 (337)
T cd05283 79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGL 143 (337)
T ss_pred CEEEEecCCCCCCCCccccCCchhcCcchhhcc-cccccCC--------------CcCCCcceeEEEechhheEECCCCC
Confidence 999854 44579999999999999998865431 1111111 0112489999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~ 255 (373)
++++++.+.+.+.+||.++ +...++++++|+|.|.|++|++++++++.+|+ +|+++++++++.++++++|++++++.+
T Consensus 144 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~ 221 (337)
T cd05283 144 DSAAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATK 221 (337)
T ss_pred CHHHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCc
Confidence 9999999999999999975 45568999999998889999999999999999 999999999999999999999999876
Q ss_pred CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCC
Q 017335 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL 334 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 334 (373)
. .++... ..+++|++|||+|....+..++++++++ |+++.+|..... .+++...++. ++++.++..+.
T Consensus 222 ~---~~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~- 290 (337)
T cd05283 222 D---PEAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEP--LPVPPFPLIFGRKSVAGSLIGG- 290 (337)
T ss_pred c---hhhhhh----ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCC--CccCHHHHhcCceEEEEecccC-
Confidence 5 333221 1348999999999875589999999997 999999975432 2556666554 99999987654
Q ss_pred CchhHHHHHHHHHHcCCCCC--CcccccCCCcccccc
Q 017335 335 KPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAGL 369 (373)
Q Consensus 335 ~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~~ 369 (373)
.+++.+++++++++++++ +.|+++++.+|++.+
T Consensus 291 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~~ 325 (337)
T cd05283 291 --RKETQEMLDFAAEHGIKPWVEVIPMDGINEALERL 325 (337)
T ss_pred --HHHHHHHHHHHHhCCCccceEEEEHHHHHHHHHHH
Confidence 578999999999999875 778888888877543
No 57
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.4e-38 Score=305.62 Aligned_cols=317 Identities=27% Similarity=0.383 Sum_probs=264.6
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++.+++....+++.|.|++.++||+|||.++++|++|+..+.+..+. ..|.++|||++|+|+++|++++.|++
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVTSLKV 77 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCccCCC
Confidence 899999998774448999999999999999999999999999988776532 34678999999999999999999999
Q ss_pred CCEEEeeC-CCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 96 RDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 96 Gd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
||+|++.+ ...|+.|..|..+..++|.+... .|+..+| +|++|+.++.+.++++|++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~ 135 (338)
T PRK09422 78 GDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEG 135 (338)
T ss_pred CCEEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCC
Confidence 99999765 46799999999999999987653 4555666 9999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHH-CCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~-~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
+++++++.++....|||+++ +...++++++|||+|+|++|++++++|+. +|+ +|+++++++++.+.++++|++.+++
T Consensus 136 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 213 (338)
T PRK09422 136 LDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTIN 213 (338)
T ss_pred CCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEec
Confidence 99999999999999999976 77889999999999999999999999998 599 8999999999999999999999998
Q ss_pred CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (373)
++. ..++.+.+.+.++ ++|+++++.++...+..++++++.+ |+++.+|.... ..+++...+.. +.++.++..+
T Consensus 214 ~~~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 287 (338)
T PRK09422 214 SKR--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVG 287 (338)
T ss_pred ccc--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCC
Confidence 753 1456677777765 6886555555566699999999997 99999987432 34455555554 7888776533
Q ss_pred CCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335 333 GLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG 368 (373)
Q Consensus 333 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~ 368 (373)
. .+++.++++++++|++.+ ..++++++.+++..
T Consensus 288 ~---~~~~~~~~~l~~~g~l~~~v~~~~~~~~~~a~~~ 322 (338)
T PRK09422 288 T---RQDLEEAFQFGAEGKVVPKVQLRPLEDINDIFDE 322 (338)
T ss_pred C---HHHHHHHHHHHHhCCCCccEEEEcHHHHHHHHHH
Confidence 3 578999999999998864 55677777766543
No 58
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.5e-39 Score=289.00 Aligned_cols=310 Identities=23% Similarity=0.311 Sum_probs=262.4
Q ss_pred CCCCCCcccceeeEEeecCCCC---eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEE
Q 017335 6 ASPKAGKVIRCKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGV 82 (373)
Q Consensus 6 ~~~~~~~~~~~ka~~~~~~~~~---l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~ 82 (373)
.+++.+++...|++++++.|+| +++++.++|..+.++|+||..|+.||++|+..++|.|+..+ .+|.+-|+|++|+
T Consensus 10 ~ssa~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP-~~PAVgGnEGv~e 88 (354)
T KOG0025|consen 10 SSSASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRP-ELPAVGGNEGVGE 88 (354)
T ss_pred cccccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCC-CCCcccCCcceEE
Confidence 3455678899999999998887 88999999998888899999999999999999999998876 8899999999999
Q ss_pred EEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEE
Q 017335 83 VESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSV 162 (373)
Q Consensus 83 V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~ 162 (373)
|+.+|+.++.|++||.|+.... +.|+|++|.+
T Consensus 89 Vv~vGs~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v 120 (354)
T KOG0025|consen 89 VVAVGSNVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAV 120 (354)
T ss_pred EEEecCCcCccCCCCeEeecCC------------------------------------------------CCccceeeEe
Confidence 9999999999999999987643 2459999999
Q ss_pred eeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHH-
Q 017335 163 VDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF- 240 (373)
Q Consensus 163 v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~- 240 (373)
.+++.++++++.++++.||.+.+..+|||+++.+..++.+||+|+-.|+ +++|++.+|+||++|+ +-|-+.|+-...
T Consensus 121 ~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ie 199 (354)
T KOG0025|consen 121 FSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIE 199 (354)
T ss_pred ecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHH
Confidence 9999999999999999999999999999999999999999999999998 9999999999999999 555555554433
Q ss_pred ---HHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccC
Q 017335 241 ---EIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN 316 (373)
Q Consensus 241 ---~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~ 316 (373)
+.++.+||++||...+..+..+... .... .+.+.|||+|+.. ...+.+.|.+| |+++.+|. ++.++++++
T Consensus 200 el~~~Lk~lGA~~ViTeeel~~~~~~k~---~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGG-MSkqPv~~~ 273 (354)
T KOG0025|consen 200 ELKKQLKSLGATEVITEEELRDRKMKKF---KGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGG-MSKQPVTVP 273 (354)
T ss_pred HHHHHHHHcCCceEecHHHhcchhhhhh---hccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecC-ccCCCcccc
Confidence 3356799999996554222222111 1123 7899999999988 77888999997 99999998 788889998
Q ss_pred HHHHhh-CcEEEEeecCCCCc--------hhHHHHHHHHHHcCCCCC---CcccccCCCcccccccc
Q 017335 317 SIEILK-GRSVCGTYFGGLKP--------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGLLV 371 (373)
Q Consensus 317 ~~~~~~-~~~i~g~~~~~~~~--------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~l~ 371 (373)
...++. ++.++|+++..|.. .+.+.++.++++.|+|.. +..++++...|...+|.
T Consensus 274 ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~ 340 (354)
T KOG0025|consen 274 TSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALS 340 (354)
T ss_pred cchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHH
Confidence 888887 99999999888763 245788999999999986 67788888877777663
No 59
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.6e-38 Score=306.09 Aligned_cols=316 Identities=28% Similarity=0.398 Sum_probs=265.0
Q ss_pred eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++.+++. +++++.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT---RAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC---CCCcccccceEEEEEEeCCCCCccC
Confidence 78999998876 99999999996 8999999999999999999888876542 4578999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP 172 (373)
+||+|+......|+.|..|..|+.++|....+ .|...+| +|++|+.+|.+ .++++|
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP 134 (345)
T cd08287 77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVP 134 (345)
T ss_pred CCCEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECC
Confidence 99999886677899999999999999987554 4555556 99999999975 999999
Q ss_pred CCCChhhhh-----ccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335 173 PHIPLGIAC-----LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (373)
Q Consensus 173 ~~l~~~~aa-----~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 247 (373)
++++++.+. ++...+.+||+++ ....++++++|+|.|+|++|++++++|+.+|++.++++++++++.+.++++|
T Consensus 135 ~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g 213 (345)
T cd08287 135 GSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFG 213 (345)
T ss_pred CCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcC
Confidence 999883221 2235788899875 5678999999999988999999999999999966899999998999999999
Q ss_pred CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHH-HhhCcE
Q 017335 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRS 325 (373)
Q Consensus 248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~~~~~~ 325 (373)
++++++++. .++.+.+.+.+++ ++|+++|++|+...++.++++++++ |+++.+|.... ...++... +.++++
T Consensus 214 a~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~ 287 (345)
T cd08287 214 ATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVG 287 (345)
T ss_pred CceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceE
Confidence 999999987 6788888888877 8999999999877799999999997 99999987542 34555533 444999
Q ss_pred EEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335 326 VCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSA 367 (373)
Q Consensus 326 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~ 367 (373)
+.+..... .+.+.++++++.++++.+ +.|+++++.+++.
T Consensus 288 ~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~ 331 (345)
T cd08287 288 LAGGPAPV---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYR 331 (345)
T ss_pred EEEecCCc---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHH
Confidence 98764222 467999999999999874 5577787777654
No 60
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.2e-38 Score=304.68 Aligned_cols=320 Identities=27% Similarity=0.412 Sum_probs=273.4
Q ss_pred eeeEEeecCC-CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++..++ ..+++++++.|.|.++||+||+.++++|++|+..+.+..+... ..|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKP-KLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCC-CCCccCCcccceEEEEeCCCCCCCC
Confidence 7999999877 3399999999999999999999999999999998887654321 4567899999999999999999999
Q ss_pred CCCEEEeeC-CCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 95 ERDLVLPIF-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 95 ~Gd~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
+||+|+..+ ...|+.|.+|..++..+|.+... .|+...| +|++|+.++++.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~ 137 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPD 137 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCC
Confidence 999999876 46799999999999999988754 5555556 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++++++.++....|||.++.. ..++++++|||+|+ +++|++++++|+.+|+ +|+++.+++++.+.++++|+++++
T Consensus 138 ~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~ 215 (341)
T cd08297 138 GLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFV 215 (341)
T ss_pred CCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999997654 58999999999998 6799999999999999 999999999999999999999999
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (373)
+++. .++.+.+.+.+++ ++|+++|+.++...+..++++++++ |+++.+|... ....+++...++. +.++.+..
T Consensus 216 ~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~ 290 (341)
T cd08297 216 DFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSL 290 (341)
T ss_pred cCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEec
Confidence 9887 6788888888766 8999999888777799999999997 9999999754 2334666666555 88988864
Q ss_pred cCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335 331 FGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~ 368 (373)
... .+++++++++++++++.+ ..|+++++.+++..
T Consensus 291 ~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~~~ 327 (341)
T cd08297 291 VGT---RQDLQEALEFAARGKVKPHIQVVPLEDLNEVFEK 327 (341)
T ss_pred cCC---HHHHHHHHHHHHcCCCcceeEEEcHHHHHHHHHH
Confidence 433 578999999999998864 56677776666543
No 61
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.3e-38 Score=310.63 Aligned_cols=328 Identities=27% Similarity=0.377 Sum_probs=265.3
Q ss_pred eeeEEeecCCCCeEEEEEecCCC-CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||++++.+++. ++++++|.|.+ +++||+|||.+++||++|++.+.|..+. .+|.++|||++|+|+++|+.+++++
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~---~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (375)
T cd08282 1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA---EPGLVLGHEAMGEVEEVGSAVESLK 76 (375)
T ss_pred CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC---CCCceeccccEEEEEEeCCCCCcCC
Confidence 68999998875 99999999996 7999999999999999999999887652 4688999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKIT 172 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP 172 (373)
+||+|+..+..+|+.|..|+.+..++|.+....... ...|.... .+ ..|+|++|+.+|.+ .++++|
T Consensus 77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~--~~~~~~~~--------~~--~~g~~a~y~~v~~~~~~~~~lP 144 (375)
T cd08282 77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAG--GAYGYVDM--------GP--YGGGQAEYLRVPYADFNLLKLP 144 (375)
T ss_pred CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCccccc--cccccccc--------CC--CCCeeeeEEEeecccCcEEECC
Confidence 999999999999999999999999999864321000 00010000 00 02489999999976 899999
Q ss_pred CCCChh---hhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335 173 PHIPLG---IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (373)
Q Consensus 173 ~~l~~~---~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~ 249 (373)
++++++ +++.+...++|||+++ +...+++|++|+|.|+|++|++++++|+.+|+.+|+++++++++.+.++++|+
T Consensus 145 ~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~- 222 (375)
T cd08282 145 DRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA- 222 (375)
T ss_pred CCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-
Confidence 999998 5677888999999987 78889999999999889999999999999997679999999999999999998
Q ss_pred eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH-----------HHHHHHHHhccCCceEEEEcccCCCC-------
Q 017335 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS-----------VMNDAFNSSREGWGKTVILGVEMHGS------- 311 (373)
Q Consensus 250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~G~~~~~~------- 311 (373)
..++.++ .++.+.+.+++++++|+++||+|... .+..++++++++ |+++.+|......
T Consensus 223 ~~v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~ 298 (375)
T cd08282 223 IPIDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAA 298 (375)
T ss_pred eEeccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCccccccccc
Confidence 4567665 67888888777668999999999762 488999999997 9999888743211
Q ss_pred ----ccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 312 ----PISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 312 ----~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
...++...++. +.++.++... ..+.+.+++++++++++++ +.|+++++++++..
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~ 362 (375)
T cd08282 299 AKQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYAR 362 (375)
T ss_pred ccCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHH
Confidence 23455555555 7777766422 2567889999999999874 77888888887654
No 62
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.6e-38 Score=304.29 Aligned_cols=319 Identities=28% Similarity=0.405 Sum_probs=270.3
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++++++. +.+++.+.|++.+++|+|++.++++|+.|+..+.+..... ..|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~--~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDL--KPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccC--CCCcccccceEEEEEeeCCCCCCCCC
Confidence 68999998875 9999999999999999999999999999999888765322 45779999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc-----eEE
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH-----VVK 170 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~ 170 (373)
||+|+..+...|++|++|..+++++|..... .|...+| +|++|+.++.+. +++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~v~v~~~~~~~~~~~~ 135 (343)
T cd08235 78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYDG-------------------GFAEYVRVPAWAVKRGGVLK 135 (343)
T ss_pred CCEEEEccCCCCCCChHHHCcCcccCCCcce---eccCCCC-------------------cceeeEEecccccccccEEE
Confidence 9999999999999999999999999977543 3444455 999999999999 999
Q ss_pred cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (373)
Q Consensus 171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~ 250 (373)
+|+++++.+++.+ .++.+||.++. ...++++++|||+|+|++|++++++|+..|++.|+++++++++.+.++++|+++
T Consensus 136 lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~ 213 (343)
T cd08235 136 LPDNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADY 213 (343)
T ss_pred CCCCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcE
Confidence 9999999999876 68899999764 458999999999988999999999999999933999999999999999999999
Q ss_pred EEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335 251 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG 328 (373)
Q Consensus 251 vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g 328 (373)
++++++ .++.+.+++.+++ ++|+||||+++...+..++++++++ |+++.+|........+++...+.. ++++.+
T Consensus 214 ~~~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~ 289 (343)
T cd08235 214 TIDAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITG 289 (343)
T ss_pred EecCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEE
Confidence 999887 7888888888777 8999999999876689999999997 999999875443334555555554 788877
Q ss_pred eecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 329 TYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
+.... .+.+++++++++++++.+ ..|+++++.++++.
T Consensus 290 ~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~ 331 (343)
T cd08235 290 SYAAS---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFEL 331 (343)
T ss_pred EecCC---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHH
Confidence 65333 467889999999998752 56778877777654
No 63
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=6.8e-38 Score=297.35 Aligned_cols=300 Identities=28% Similarity=0.461 Sum_probs=257.0
Q ss_pred eeeEEeecCCC-CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGK-PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~-~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||+++.++++ .+++++++.|.+.+++|+|||.++++|++|.....+..... ..|.++|+|++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~ 78 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPV--ETPVVLGHEFSGTIVEVGPDVEGWK 78 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcC--CCCeeeccceEEEEEEECCCcCcCC
Confidence 68899887552 49999999999999999999999999999998888765333 4678999999999999999999999
Q ss_pred CCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 95 ERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 95 ~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
+||+|+..+. .+|++|++|..+.++.|++.. +.|...+| +|++|+.++...++++|+
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lp~ 136 (306)
T cd08258 79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRK---GIGTQADG-------------------GFAEYVLVPEESLHELPE 136 (306)
T ss_pred CCCEEEEccCcCCCCCCcchhCcCcccCCCCc---eeeecCCC-------------------ceEEEEEcchHHeEECcC
Confidence 9999998875 689999999999999998642 23444445 999999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEE--cCChhHHHHHHHcCCceE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGV--DINPEKFEIGKKFGITDF 251 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~--~~~~~~~~~~~~lga~~v 251 (373)
++++++++ +...++++|.++.....++++++|||.|+|.+|++++++|+.+|+ +|+++ ++++++.+.++++|++++
T Consensus 137 ~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~ 214 (306)
T cd08258 137 NLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV 214 (306)
T ss_pred CCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc
Confidence 99999887 666888999988888899999999998889999999999999999 78776 345567888899999888
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT 329 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 329 (373)
+++. .++.+.+.+.+++ ++|++||++|....+...+++++++ |+++.+|... .....++...++. +++++|+
T Consensus 215 -~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~ 288 (306)
T cd08258 215 -NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGS 288 (306)
T ss_pred -CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEE
Confidence 7776 7888888887776 8999999998777789999999997 9999999854 3345667777766 9999999
Q ss_pred ecCCCCchhHHHHHHHHHHcC
Q 017335 330 YFGGLKPRSDIATLAQKYLDK 350 (373)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~g 350 (373)
.++. +++++++++++++|
T Consensus 289 ~~~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 289 RSST---PASWETALRLLASG 306 (306)
T ss_pred ecCc---hHhHHHHHHHHhcC
Confidence 8766 67899999999876
No 64
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=2.5e-38 Score=309.60 Aligned_cols=324 Identities=25% Similarity=0.361 Sum_probs=263.6
Q ss_pred cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC------CCCCCCCCccccCcccEEEEEeC
Q 017335 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST------DLPKLPLPVIFGHEAVGVVESVG 87 (373)
Q Consensus 14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~------~~~~~~~p~~~G~e~~G~V~~vG 87 (373)
.++.+.++..+ . ++++++|.|++++++|+||+.++++|++|+..+.+.. +.. ..+|.++|||++|+|+++|
T Consensus 27 ~~~~~~~~~~~-~-~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG 103 (384)
T cd08265 27 TNLGSKVWRYP-E-LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGL-TEFPVVIGHEFSGVVEKTG 103 (384)
T ss_pred ccceeEEEeCC-C-EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcc-cCCCcccccceEEEEEEEC
Confidence 34556666643 3 9999999999999999999999999999998876321 111 1567899999999999999
Q ss_pred CCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccc
Q 017335 88 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 167 (373)
Q Consensus 88 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 167 (373)
+++++|++||+|++.+..+|+.|+.|..+.+++|..... .|+..+| +|++|+.++++.
T Consensus 104 ~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~ 161 (384)
T cd08265 104 KNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARY 161 (384)
T ss_pred CCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHH
Confidence 999999999999999999999999999999999987553 5555566 999999999999
Q ss_pred eEEcCCCC-------ChhhhhccchhhhhHHHHHHHH-hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335 168 VVKITPHI-------PLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239 (373)
Q Consensus 168 ~~~lP~~l-------~~~~aa~l~~~~~ta~~~~~~~-~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~ 239 (373)
++++|+++ +++ ++++..++++||+++... ..+++|++|||+|+|++|++++++|+.+|+++|+++++++++
T Consensus 162 ~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~ 240 (384)
T cd08265 162 AWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEER 240 (384)
T ss_pred eEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence 99999863 455 555666889999987666 689999999999889999999999999998779999999999
Q ss_pred HHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCH-HHHHHHHHHhccCCceEEEEcccCCCCccccCH
Q 017335 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 317 (373)
Q Consensus 240 ~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~ 317 (373)
.+.++++|+++++++++....++...+.+++++ ++|+|+|++|.. ..+..++++++++ |+++.+|.... .++++.
T Consensus 241 ~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~ 317 (384)
T cd08265 241 RNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHL 317 (384)
T ss_pred HHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccH
Confidence 999999999999987751123788888888887 899999999973 4588999999997 99999996432 344454
Q ss_pred HHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 318 IEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 318 ~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
..+.. +.++.++.... ....+.+++++++++++.+ +.|+++++.+++..
T Consensus 318 ~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~ 372 (384)
T cd08265 318 EVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKA 372 (384)
T ss_pred HHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHH
Confidence 44444 67888774322 1356899999999999874 45778777776654
No 65
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=3.2e-38 Score=302.39 Aligned_cols=318 Identities=27% Similarity=0.421 Sum_probs=272.3
Q ss_pred eeeEEeecCCCC-eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKP-LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~-l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||++++..++++ +.+.+.+.|.+++++|+|++.++++|+.|+..+.+..+... .+|.++|+|++|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~-~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLT-KLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccC-CCCEeccccccEEEEEECCCCccCC
Confidence 799999999887 67888889999999999999999999999999888765322 5678999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|+..+...|+.|.+|..++.++|....+ .|+..+| +|++|+.++.+.++++|++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~ 137 (338)
T cd08254 80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG-------------------GFAEYIVVPARALVPVPDG 137 (338)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC-------------------cceeeEEechHHeEECCCC
Confidence 99999999999999999999999999977654 4555556 9999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
+++++++.++.++.|||.++.+...++++++|||.|+|++|++++++|+.+|+ +|+++++++++.+.++++|++++++.
T Consensus 138 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~ 216 (338)
T cd08254 138 VPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNS 216 (338)
T ss_pred CCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcC
Confidence 99999999999999999988788889999999999889999999999999999 89999999999999999999999887
Q ss_pred CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (373)
.. ..+...+ ..+.+ ++|+++||+|....+..++++|+++ |+++.+|.... ...++...+.. +.++.++...
T Consensus 217 ~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~ 289 (338)
T cd08254 217 LD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG 289 (338)
T ss_pred CC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC
Confidence 76 5565656 44555 8999999999877799999999997 99999986432 23455555555 8888887543
Q ss_pred CCCchhHHHHHHHHHHcCCCCC--CcccccCCCcccc
Q 017335 333 GLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSA 367 (373)
Q Consensus 333 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~ 367 (373)
. .+.+.+++++++++.+.+ +.++++++.+++.
T Consensus 290 ~---~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~ 323 (338)
T cd08254 290 T---PEDLPEVLDLIAKGKLDPQVETRPLDEIPEVLE 323 (338)
T ss_pred C---HHHHHHHHHHHHcCCCcccceeEcHHHHHHHHH
Confidence 3 578999999999998875 5666666666544
No 66
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1e-37 Score=303.04 Aligned_cols=321 Identities=23% Similarity=0.369 Sum_probs=253.9
Q ss_pred cceeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCCCCc
Q 017335 14 IRCKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 14 ~~~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
.+|+++++..++. +++++.+.|.|.++||+||+.++++|++|+..+.+.... ....+|.++|||++|+|+++|+++++
T Consensus 16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 4455566666655 899999999999999999999999999999988763211 00135778999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l 171 (373)
|++||+|++.+...|++|..|+.|.++.|+...+ .+. ..+| +|++|+.++.+.++++
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~g-------------------~~~~y~~v~~~~~~~~ 152 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVHG-------------------SLANQVVHPADLCFKL 152 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCCC-------------------cccceEEcchHHeEEC
Confidence 9999999999999999999999999999986432 221 1244 9999999999999999
Q ss_pred CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
|++++++++++.. ++.++|.++ +...+.++++|||+|+|++|++++++|+.+|+..|+++++++++.+.++++|++++
T Consensus 153 P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~ 230 (364)
T PLN02702 153 PENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEI 230 (364)
T ss_pred CCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE
Confidence 9999999987633 555678765 77889999999999989999999999999999668889989999999999999988
Q ss_pred EcCCCCCCccHHHHHHHh---cCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEE
Q 017335 252 INPATCGDKTVSQVIKEM---TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVC 327 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~ 327 (373)
++... ...++.+.+.++ +++++|+|||++|....+..++++++++ |+++.+|.... ..++....... ++++.
T Consensus 231 ~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~ 306 (364)
T PLN02702 231 VLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVV 306 (364)
T ss_pred EecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEE
Confidence 76532 114566666554 2338999999999777799999999997 99999996432 23445545555 88998
Q ss_pred EeecCCCCchhHHHHHHHHHHcCCCCC-----Cc--ccccCCCcccc
Q 017335 328 GTYFGGLKPRSDIATLAQKYLDKVHLR-----SS--FHLCDPNSDSA 367 (373)
Q Consensus 328 g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~--~~~~~~~~a~~ 367 (373)
++... ...+.+++++++++++.+ +. ++++++.++++
T Consensus 307 ~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~ 349 (364)
T PLN02702 307 GVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFE 349 (364)
T ss_pred EeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHH
Confidence 87532 357889999999999863 34 33356665543
No 67
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.6e-37 Score=299.20 Aligned_cols=317 Identities=28% Similarity=0.427 Sum_probs=259.5
Q ss_pred eEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCC-CCCCCCCCCccccCcccEEEEEeCCCCCccCCC
Q 017335 18 AAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER 96 (373)
Q Consensus 18 a~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 96 (373)
|++++++.. +++++.+.|.+.++||+|||.++++|+.|+..+.+. .......+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467788755 999999999999999999999999999999876432 111101356789999999999999999999999
Q ss_pred CEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCC
Q 017335 97 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP 176 (373)
Q Consensus 97 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~ 176 (373)
|+|++.+..+|++|.+|+.|.+++|++.... .....+| +|++|+.++++.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVDG-------------------TLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccCCC-------------------ceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999865331 1111234 899999999999999999999
Q ss_pred hhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCC
Q 017335 177 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 256 (373)
Q Consensus 177 ~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~ 256 (373)
+++++.+ .++.+||.++ +...++++++|||.|+|++|++++++|+.+|+++|+++++++++.++++++|++++++.+.
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9999877 4888999875 8889999999999988999999999999999944999999999999999999999998876
Q ss_pred CCCcc---HHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335 257 CGDKT---VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF 331 (373)
Q Consensus 257 ~~~~~---~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 331 (373)
.+ +.+.+.+.+.+ ++|++|||+|+...++.++++++++ |+++.+|..... ..++...... ++++.+...
T Consensus 217 ---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd05285 217 ---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFR 290 (343)
T ss_pred ---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEecc
Confidence 45 37778777776 7999999999875689999999997 999999864322 3444444444 778777642
Q ss_pred CCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 332 GGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
. .+.+.+++++++++++.+ +.|+++++.+++..
T Consensus 291 ~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~ 328 (343)
T cd05285 291 Y----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFET 328 (343)
T ss_pred C----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHH
Confidence 2 267899999999998752 56778887777644
No 68
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=3e-37 Score=295.08 Aligned_cols=320 Identities=23% Similarity=0.343 Sum_probs=268.7
Q ss_pred eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++...+. .+++.+.+.|.+.+++|+|++.++++|++|+..+.|..+... .+|.++|||++|+|+.+|++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~ 79 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKL-PLPHILGSDGAGVVEAVGPGVTNV 79 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCC-CCCeecccceEEEEEEeCCCCCCC
Confidence 68999984432 278888888889999999999999999999998887654221 567899999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|++.+...|+.|.+|..+.+++|.+... .|....| +|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~ 137 (342)
T cd08266 80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPD 137 (342)
T ss_pred CCCCEEEEccccccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCC
Confidence 999999999999999999999999999987533 5555555 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++++++.+++.+.+||.++.+...++++++|+|+|+ +.+|++++++++..|+ +|+.+++++++.+.++.++.+.++
T Consensus 138 ~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~ 216 (342)
T cd08266 138 NLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVI 216 (342)
T ss_pred CCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEE
Confidence 99999999999999999998888888999999999998 7999999999999999 899999999999999888888888
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (373)
+... .++.+.+...+.+ ++|+++++.|... +..++++++++ |+++.+|..... ...++....+. ++++.+..
T Consensus 217 ~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 290 (342)
T cd08266 217 DYRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGST 290 (342)
T ss_pred ecCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEe
Confidence 7665 6777777777666 8999999999865 88999999997 999999875432 33455533334 88888876
Q ss_pred cCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 331 FGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
... ...+.+++++++++.+.+ +.|+++++.+++..
T Consensus 291 ~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~ 328 (342)
T cd08266 291 MGT---KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRR 328 (342)
T ss_pred cCC---HHHHHHHHHHHHcCCcccceeeeEcHHHHHHHHHH
Confidence 443 568899999999998764 66777777766543
No 69
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.6e-37 Score=297.19 Aligned_cols=308 Identities=20% Similarity=0.321 Sum_probs=247.8
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC---------CCCCCCccccCcccEEEEEe
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL---------PKLPLPVIFGHEAVGVVESV 86 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---------~~~~~p~~~G~e~~G~V~~v 86 (373)
|||+++.++ .+++++++.|++++++|+|+|.++++|+.|+..+.|.... ....+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 789999876 4999999999999999999999999999999988773210 00145789999999999999
Q ss_pred CCCCCc-cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec
Q 017335 87 GEYVEE-VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI 165 (373)
Q Consensus 87 G~~v~~-~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~ 165 (373)
|+++++ |++||+|+..+...|+.|..|..|.. -..+| +|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-------------~~~~g-------------------~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-------------PEAPG-------------------GYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-------------cCCCC-------------------ceeeeEEech
Confidence 999987 99999999999999999999943210 01233 8999999999
Q ss_pred cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (373)
Q Consensus 166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~ 245 (373)
+.++++|+++++++++ ++.++++||.+ .....++++++|||+|+|++|.+++|+|+.+|+..++++++++++.+.+++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999999887 55688899997 578889999999999889999999999999999668888889999999999
Q ss_pred cCCceEEcCCCCCCccHHH---HHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHH-H
Q 017335 246 FGITDFINPATCGDKTVSQ---VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-I 320 (373)
Q Consensus 246 lga~~vi~~~~~~~~~~~~---~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~-~ 320 (373)
+|++++++++. .+..+ .+...+.+ ++|++||++|+...+..++++++++ |+++.+|...... ++.... +
T Consensus 205 ~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~--~~~~~~~~ 278 (341)
T cd08262 205 MGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESD--NIEPALAI 278 (341)
T ss_pred cCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCC--ccCHHHHh
Confidence 99999998775 32211 34444555 8999999999865588999999997 9999999753322 223322 2
Q ss_pred hhCcEEEEeecCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 321 LKGRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 321 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
.++.++.++.... .+++.++++++++|++.+ +.|+++++++++..
T Consensus 279 ~~~~~~~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~ 328 (341)
T cd08262 279 RKELTLQFSLGYT---PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEA 328 (341)
T ss_pred hcceEEEEEeccc---HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHH
Confidence 3477877654222 467899999999999874 55788888777654
No 70
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=1.6e-37 Score=296.08 Aligned_cols=295 Identities=23% Similarity=0.273 Sum_probs=249.8
Q ss_pred eeeEEeecCCCC---eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335 16 CKAAICRIPGKP---LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 16 ~ka~~~~~~~~~---l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
|||+++.+++.+ ++++++|.|.+.++||+|||.++++|++|+..+.|..+... ..|.++|||++|+|+++|+++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~-~~p~~~G~e~~G~V~~~G~~v~~ 79 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKP-ELPAIGGSEAVGVVDAVGEGVKG 79 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCC-CCCCCCCcceEEEEEEeCCCCCC
Confidence 799999887652 78899999999999999999999999999999887654221 56889999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
+++||+|+... .. |+|++|+.+++..++++|
T Consensus 80 ~~~Gd~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~ip 110 (324)
T cd08292 80 LQVGQRVAVAP------------------------------VH-------------------GTWAEYFVAPADGLVPLP 110 (324)
T ss_pred CCCCCEEEecc------------------------------CC-------------------CcceeEEEEchHHeEECC
Confidence 99999998642 11 389999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
+++++++++.+++...++|.++ +...+++|++|||+|+ |.+|++++++|+.+|+ +|+++.+++++.+.++++|++++
T Consensus 111 ~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~ 188 (324)
T cd08292 111 DGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPV 188 (324)
T ss_pred CCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEE
Confidence 9999999999988889999865 5688999999999988 9999999999999999 89999889999999888999999
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT 329 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 329 (373)
+++++ .++.+.+.+++++ ++|+||||+|+.. ...++++++++ |+++.+|.. ....++++....+. +.++.++
T Consensus 189 ~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~ 262 (324)
T cd08292 189 VSTEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSM-SGEPMQISSGDLIFKQATVRGF 262 (324)
T ss_pred EcCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecC-CCCCCcCCHHHHhhCCCEEEEE
Confidence 98877 7888889888887 9999999999865 88999999997 999999974 23344556554555 8999988
Q ss_pred ecCCCC-------chhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 330 YFGGLK-------PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 330 ~~~~~~-------~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
....+. ..+.+.++++++.+|++.+ +.|+++++.++++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~ 311 (324)
T cd08292 263 WGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAA 311 (324)
T ss_pred EcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHH
Confidence 654321 1356888999999999873 67888887777653
No 71
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2.4e-37 Score=294.72 Aligned_cols=299 Identities=21% Similarity=0.332 Sum_probs=251.8
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++.+++. +++++++.|+++++||+||+.++++|++|+....|..+ +|.++|||++|+|+++|++ +++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC---CCC
Confidence 68999998765 99999999999999999999999999999998877542 5678999999999999987 689
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCC-CCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
||+|...+...|+.|.+|..|.+++|+.... .++ ..+| +|++|+.++.+.++++|++
T Consensus 72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~ 129 (319)
T cd08242 72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG-------------------AFAEYLTLPLENLHVVPDL 129 (319)
T ss_pred CCeEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC-------------------ceEEEEEechHHeEECcCC
Confidence 9999999999999999999999999987543 344 2345 9999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
+++++++.+ .++.++|. +.+...++++++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.++++|++.+++.
T Consensus 130 ~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~ 206 (319)
T cd08242 130 VPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPD 206 (319)
T ss_pred CCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCc
Confidence 999988864 45667776 5678889999999999889999999999999999 79999999999999999999888876
Q ss_pred CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecC
Q 017335 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 332 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~ 332 (373)
+. . +.+ ++|+++||+|....++.++++++++ |+++..+.... ...++...+.. +.++.++..+
T Consensus 207 ~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 271 (319)
T cd08242 207 EA---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG 271 (319)
T ss_pred cc---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc
Confidence 54 1 233 8999999999877789999999997 99998775432 34556655555 8888887543
Q ss_pred CCCchhHHHHHHHHHHcCCCCC-----CcccccCCCcccccc
Q 017335 333 GLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAGL 369 (373)
Q Consensus 333 ~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~~ 369 (373)
. +++++++++++++++ +.|+++++.+++..+
T Consensus 272 ~------~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~ 307 (319)
T cd08242 272 P------FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERA 307 (319)
T ss_pred c------HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHH
Confidence 2 788999999999842 778888888876543
No 72
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=3.2e-37 Score=295.01 Aligned_cols=310 Identities=24% Similarity=0.356 Sum_probs=262.4
Q ss_pred eeeEEeecCCC----CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335 16 CKAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (373)
Q Consensus 16 ~ka~~~~~~~~----~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (373)
|||+++.+++. ++++++.+.|.++++||+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~ 78 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPP--KLPLIPGHEIVGRVEAVGPGVT 78 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCC--CCCccccccccEEEEEECCCCC
Confidence 78999998883 48888888888999999999999999999999988876544 5788999999999999999999
Q ss_pred ccCCCCEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335 92 EVKERDLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (373)
Q Consensus 92 ~~~~Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 170 (373)
++++||+|++.+. ..|++|.+|..+.+++|+...+ .|+..+| +|++|+.++.+.+++
T Consensus 79 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~ 136 (329)
T cd08298 79 RFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYP 136 (329)
T ss_pred CCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEE
Confidence 9999999987654 6799999999999999987765 5655566 899999999999999
Q ss_pred cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (373)
Q Consensus 171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~ 250 (373)
+|+++++.+++.+++++.|||.++ +..+++++++|||+|+|++|++++++++..|+ +|+++++++++.+.++++|+++
T Consensus 137 lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 214 (329)
T cd08298 137 IPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADW 214 (329)
T ss_pred CCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcE
Confidence 999999999999999999999977 88999999999999999999999999999999 9999999999999999999988
Q ss_pred EEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEee
Q 017335 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (373)
Q Consensus 251 vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (373)
+++.+. . .++++|+++++.+....++.++++++++ |+++.+|.... ....++...+..+..+.++.
T Consensus 215 ~~~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~ 280 (329)
T cd08298 215 AGDSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVA 280 (329)
T ss_pred EeccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEec
Confidence 887754 1 2237999999877777799999999997 99999986322 22234444444477777764
Q ss_pred cCCCCchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335 331 FGGLKPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~ 368 (373)
... .+.+.+++++++++.+.+ +.|+++++.+|++.
T Consensus 281 ~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~a~~~ 317 (329)
T cd08298 281 NLT---RQDGEEFLKLAAEIPIKPEVETYPLEEANEALQD 317 (329)
T ss_pred CCC---HHHHHHHHHHHHcCCCCceEEEEeHHHHHHHHHH
Confidence 322 567899999999998875 67788888777654
No 73
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=4.5e-37 Score=295.74 Aligned_cols=320 Identities=27% Similarity=0.460 Sum_probs=266.0
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++++.+. +.+++.+.|+++++||+||+.++++|+.|+..+.+.+.. ..|.++|+|++|+|+++|+++++|++
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~---~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY---HPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC---CCCcccCcceEEEEEEECCCCCcCCC
Confidence 78999999876 999999999999999999999999999999888776522 46788999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||+|+..+...|+.|.+|..+.+..|+.... .|...+| +|++|+.+|++.++++|+++
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lP~~~ 134 (343)
T cd08236 77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRDG-------------------AFAEYVSVPARNLIKIPDHV 134 (343)
T ss_pred CCEEEEcCCCCCCCChhHHCcChhhCCCcce---EecccCC-------------------cccceEEechHHeEECcCCC
Confidence 9999999888999999999999999977532 4444455 99999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~ 255 (373)
++++++++ ..+++||.++. ...++++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|++++++.+
T Consensus 135 ~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~ 212 (343)
T cd08236 135 DYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK 212 (343)
T ss_pred CHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc
Confidence 99999888 57889999764 77899999999998899999999999999994499999999999999999999999887
Q ss_pred CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcc-ccCHHHHhh-CcEEEEeecC
Q 017335 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEILK-GRSVCGTYFG 332 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~~~-~~~i~g~~~~ 332 (373)
. .. .+.+.+..++ ++|++|||+|....+..++++++++ |+++.+|.......+ ..+...++. +.++.+....
T Consensus 213 ~---~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (343)
T cd08236 213 E---ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNS 287 (343)
T ss_pred c---cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeec
Confidence 6 55 6677777776 7999999998877789999999997 999999975432112 223333344 8888887653
Q ss_pred CCC--chhHHHHHHHHHHcCCCC-----CCcccccCCCccccc
Q 017335 333 GLK--PRSDIATLAQKYLDKVHL-----RSSFHLCDPNSDSAG 368 (373)
Q Consensus 333 ~~~--~~~~~~~~~~~~~~g~i~-----~~~~~~~~~~~a~~~ 368 (373)
... ..+.+.+++++++++++. ...++++++.+++..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 330 (343)
T cd08236 288 YSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFER 330 (343)
T ss_pred cccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHH
Confidence 321 246788999999999875 256677777666543
No 74
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.2e-37 Score=296.00 Aligned_cols=321 Identities=30% Similarity=0.410 Sum_probs=258.5
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCC-CCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||++++.++..+++.+.+.|.|+++|++|||.++++|+.|+..+.+.. ......+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 7899999887669999999999999999999999999999988755432 111014567899999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|+..+.++|+.|.+|..+.+++|.... ..|...+| +|++|++++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGVDTDG-------------------CFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc---eEeccCCC-------------------cceEEEEechHHcEECcCC
Confidence 9999999999999999999999999997642 24444445 8999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
++++.+ +++.++.+++.++. ...+++++|||.|+|++|++++++|+.+|+.+|+++++++++.+.++++|++++++.
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998555 55557888887654 456789999999889999999999999998668889889999999999999999987
Q ss_pred CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCC
Q 017335 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (373)
+. .++. .+.+++++ ++|++|||+|+......++++|+++ |+++.+|........++....++++.++.+.....
T Consensus 216 ~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (341)
T cd05281 216 RE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK 290 (341)
T ss_pred cc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC
Confidence 76 6777 78887776 8999999999877789999999997 99999986433212222222233477777764222
Q ss_pred CCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
..+.+.+++++++++.+.+ +.++++++.+++..
T Consensus 291 --~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~ 328 (341)
T cd05281 291 --MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFEL 328 (341)
T ss_pred --cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHH
Confidence 2466888999999998763 55777777777654
No 75
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=7.6e-37 Score=291.96 Aligned_cols=315 Identities=32% Similarity=0.485 Sum_probs=263.2
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++..+++.+.++++|.|.+.+++|+|++.++++|++|+..+.|..+.. ..|.++|||++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~G~~v~~~~~ 78 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG--KYPLILGHEIVGTVEEVGEGVERFKP 78 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC--CCCeeccccceEEEEEECCCCccCCC
Confidence 7899998755558999999999999999999999999999999988866544 56789999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||+|+......|+.|.+|+.+.+++|.+.. ..|....| +|++|+.++...++++|+++
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~ 136 (332)
T cd08259 79 GDRVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEEVDG-------------------GFAEYVKVPERSLVKLPDNV 136 (332)
T ss_pred CCEEEECCCCCCcCChhhhCCCcccCCCcc---ccccccCC-------------------eeeeEEEechhheEECCCCC
Confidence 999999998999999999999999998752 24555555 99999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
++++++.+++++.+||.++.. ..+.++++|||+|+ |++|++++++++..|. +|+++.+++++.+.++++|++++++.
T Consensus 137 ~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 214 (332)
T cd08259 137 SDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDG 214 (332)
T ss_pred CHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999998766 88999999999998 9999999999999999 89999999999999988998888754
Q ss_pred CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEeecCC
Q 017335 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGG 333 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~ 333 (373)
+ . +.+.+.+.. ++|++++++|... ...++++++++ |+++.+|..... ...++..... ++.++.++..
T Consensus 215 ~----~-~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 282 (332)
T cd08259 215 S----K-FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPD-PAPLRPGLLILKEIRIIGSIS-- 282 (332)
T ss_pred H----H-HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCC-CcCCCHHHHHhCCcEEEEecC--
Confidence 3 2 555555443 7999999999877 88999999997 999999874332 2222333332 3777777642
Q ss_pred CCchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
...+++.+++++++++.+.+ +.|+++++.+++..+
T Consensus 283 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~ 320 (332)
T cd08259 283 -ATKADVEEALKLVKEGKIKPVIDRVVSLEDINEALEDL 320 (332)
T ss_pred -CCHHHHHHHHHHHHcCCCccceeEEEcHHHHHHHHHHH
Confidence 23678999999999998764 667888877776543
No 76
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=6e-37 Score=293.26 Aligned_cols=314 Identities=28% Similarity=0.429 Sum_probs=263.8
Q ss_pred eeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCC
Q 017335 17 KAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKER 96 (373)
Q Consensus 17 ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 96 (373)
||+++.+++..+++++.|.|.+.+++|+|++.++++|++|+..+.+..... .+|.++|||++|+|+++|++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~~g~~~~~~~~G 78 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGS--KYPLVPGHEIVGEVVEVGAGVEGRKVG 78 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCC--CCCcccCccceEEEEEECCCCcccccC
Confidence 689999986569999999999999999999999999999999888776443 567899999999999999999999999
Q ss_pred CEEEeeCC-CCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 97 DLVLPIFH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 97 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
|+|++.+. .+|+.|.+|+++.+++|++..+ .++..+| +|++|+.++.+.++++|+++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~ 136 (330)
T cd08245 79 DRVGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGL 136 (330)
T ss_pred CEEEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCC
Confidence 99987654 6799999999999999999654 4444445 89999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~ 255 (373)
++++++.+.+...+||.++.. ..++++++|||+|+|++|++++++|+.+|+ +|+++++++++.+.++++|++++++..
T Consensus 137 ~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 214 (330)
T cd08245 137 PLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG 214 (330)
T ss_pred CHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccC
Confidence 999999999999999997644 789999999999888899999999999999 899999999999999999999888776
Q ss_pred CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCC
Q 017335 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL 334 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~ 334 (373)
. .+.... ..+++|+++|+++.......++++++++ |+++.+|..... ...+....+.. +.++.++..+.
T Consensus 215 ~---~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~- 284 (330)
T cd08245 215 A---ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG- 284 (330)
T ss_pred C---cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC-
Confidence 5 333222 2247999999988777789999999997 999999864332 22333444555 88888886544
Q ss_pred CchhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335 335 KPRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG 368 (373)
Q Consensus 335 ~~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~ 368 (373)
...++++++++.++.+.+ +.|+++++.+++..
T Consensus 285 --~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~ 318 (330)
T cd08245 285 --RADLQEALDFAAEGKVKPMIETFPLDQANEAYER 318 (330)
T ss_pred --HHHHHHHHHHHHcCCCcceEEEEcHHHHHHHHHH
Confidence 577889999999998864 67777777776654
No 77
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=9.9e-37 Score=292.09 Aligned_cols=315 Identities=27% Similarity=0.457 Sum_probs=265.0
Q ss_pred eeeEEeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 95 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 95 (373)
|||+++.+++. +++.+.+.|+++++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+.+|++++++++
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCCCCCC
Confidence 78999998886 999999999999999999999999999999988876543 46789999999999999999999999
Q ss_pred CCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCC
Q 017335 96 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI 175 (373)
Q Consensus 96 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l 175 (373)
||+|+......|+.|.+|..+++++|++... .|...+| +|++|+.++.+.++++|+++
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~ 134 (334)
T cd08234 77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNL 134 (334)
T ss_pred CCEEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCC
Confidence 9999998888999999999999999988753 4444556 89999999999999999999
Q ss_pred ChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCC
Q 017335 176 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 255 (373)
Q Consensus 176 ~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~ 255 (373)
++.+++.+ ..+.+++.++ +...++++++|||+|+|.+|++++++|+..|++.|+++++++++.+.++++|++++++.+
T Consensus 135 ~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (334)
T cd08234 135 SFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS 212 (334)
T ss_pred CHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC
Confidence 99998876 6888999876 788999999999998899999999999999994489999999999999999998888877
Q ss_pred CCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCC
Q 017335 256 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG 333 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~ 333 (373)
. .++... ..+.+ ++|++||+++....+..++++++++ |+++.+|........+++...+.. ++++.+....
T Consensus 213 ~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 285 (334)
T cd08234 213 R---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN- 285 (334)
T ss_pred C---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-
Confidence 6 455444 33444 8999999998777789999999997 999999875443344556555554 7888877532
Q ss_pred CCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 334 LKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 334 ~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
.+.+++++++++++++.+ +.|+++++.+++..
T Consensus 286 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ 322 (334)
T cd08234 286 ---PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEG 322 (334)
T ss_pred ---HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHH
Confidence 467899999999999864 44667776666544
No 78
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=6.4e-37 Score=294.23 Aligned_cols=310 Identities=24% Similarity=0.402 Sum_probs=250.1
Q ss_pred EeecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhccc-CCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCE
Q 017335 20 ICRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDL 98 (373)
Q Consensus 20 ~~~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~ 98 (373)
++++++. +++++.+.|.++++||+|||.++++|++|+..+. +........+|.++|||++|+|+++|++|++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4666666 9999999999999999999999999999988764 3221111135778999999999999999999999999
Q ss_pred EEeeCCCCCCCCccccCCCCCcCccCCCCCCCCC-----CCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 99 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNM-----PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 99 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~-----~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
|++.+..+|++|.+|..|..+.|.++.+ .+. ..+| +|++|+.++.+.++++|+
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~g-------------------~~~~~v~v~~~~~~~iP~ 138 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRFPHVQG-------------------GFREYLVVDASQCVPLPD 138 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeeccccCCCCC-------------------ceeeEEEechHHeEECcC
Confidence 9999999999999999999999998643 221 1234 999999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
++++++++. ..+++++|.++.+.... ++++|||.|+|.+|++++++|+.+|+.+|+++++++++.++++++|++++++
T Consensus 139 ~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~ 216 (339)
T cd08232 139 GLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVN 216 (339)
T ss_pred CCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEc
Confidence 999999876 46888999876555455 9999999988999999999999999867999999999999999999999998
Q ss_pred CCCCCCccHHHHHHHhcC--CCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335 254 PATCGDKTVSQVIKEMTD--GGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (373)
.+. .++ .++.. +++|+++|+.|....++.++++|+++ |+++.+|... ...+.+...++. ++++.+..
T Consensus 217 ~~~---~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~ 286 (339)
T cd08232 217 LAR---DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSF 286 (339)
T ss_pred CCc---hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEe
Confidence 875 332 22222 26999999999766689999999997 9999998643 233444444444 78887764
Q ss_pred cCCCCchhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 331 FGGLKPRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
. ..+.+.+++++++++++.+ +.|+++++++++..
T Consensus 287 ~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~ 325 (339)
T cd08232 287 R----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFAL 325 (339)
T ss_pred c----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHH
Confidence 2 2467899999999998853 55778887776544
No 79
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.4e-36 Score=290.63 Aligned_cols=314 Identities=25% Similarity=0.393 Sum_probs=255.9
Q ss_pred ecCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCCCCccCCCCEEE
Q 017335 22 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 100 (373)
Q Consensus 22 ~~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 100 (373)
+.+++++++++.|.|.|+++||+||+.++++|++|...+.+.... ....+|.++|||++|+|+++|+++++|++||+|+
T Consensus 5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 84 (340)
T TIGR00692 5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS 84 (340)
T ss_pred ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence 456777999999999999999999999999999999876554211 1114577899999999999999999999999999
Q ss_pred eeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhh
Q 017335 101 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 180 (373)
Q Consensus 101 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~a 180 (373)
..+...|+.|..|..+.+++|++.+. .|+..+| +|++|+.++++.++++|++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 85 VETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG-------------------CFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred ECCcCCCCCChhhhCcChhhCcCcce---EeecCCC-------------------cceeEEEeehHHcEECcCCCChHhh
Confidence 99999999999999999999999753 3444455 8999999999999999999998655
Q ss_pred hccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCc
Q 017335 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 260 (373)
Q Consensus 181 a~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~ 260 (373)
+++.++.+|+.++ ...++++++|+|.|+|++|.+++++|+.+|++.|+++++++++.+.++++|++++++... .
T Consensus 143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~ 216 (340)
T TIGR00692 143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK---E 216 (340)
T ss_pred -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---c
Confidence 4666888888865 345789999999888999999999999999944889988899999999999999998876 7
Q ss_pred cHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH-HHhh-CcEEEEeecCCCCch
Q 017335 261 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILK-GRSVCGTYFGGLKPR 337 (373)
Q Consensus 261 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~-~~~i~g~~~~~~~~~ 337 (373)
++.+.+.+++++ ++|++|||+|+...+..++++++++ |+++.+|.... ..+++.. .+.. ++++.+... ....
T Consensus 217 ~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~ 291 (340)
T TIGR00692 217 DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPG--KVTIDFTNKVIFKGLTIYGITG--RHMF 291 (340)
T ss_pred CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCC--CcccchhhhhhhcceEEEEEec--CCch
Confidence 788888888776 8999999999877789999999997 99999997532 2233322 3333 777776542 1224
Q ss_pred hHHHHHHHHHHcCCCC-----CCcccccCCCccccc
Q 017335 338 SDIATLAQKYLDKVHL-----RSSFHLCDPNSDSAG 368 (373)
Q Consensus 338 ~~~~~~~~~~~~g~i~-----~~~~~~~~~~~a~~~ 368 (373)
+.+.++++++++++++ .+.|+++++.+++..
T Consensus 292 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~ 327 (340)
T TIGR00692 292 ETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFEL 327 (340)
T ss_pred hhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHH
Confidence 6688999999999986 266777777766543
No 80
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.6e-36 Score=291.01 Aligned_cols=309 Identities=23% Similarity=0.271 Sum_probs=248.3
Q ss_pred eeeEEeecCCCC--eEEEE-EecCCCCCCeEEEEEeeeeccccchhcccCCCCC------------------CCCCCCcc
Q 017335 16 CKAAICRIPGKP--LVIEE-IEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------------------PKLPLPVI 74 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~-~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~------------------~~~~~p~~ 74 (373)
|||+++..++.+ +.+.+ .+.|++.+++|+|||.++++|++|+..+.|..+. ....+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688998876542 55654 4777789999999999999999999988775431 01257889
Q ss_pred ccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccc
Q 017335 75 FGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNI 154 (373)
Q Consensus 75 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~ 154 (373)
+|||++|+|+++|+++++|++||+|++.+...|+.|..|.. |. ..|...+|
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~------~~~~~~~g------------------ 131 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID------YIGSERDG------------------ 131 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc------ccCCCCCc------------------
Confidence 99999999999999999999999999988888888766532 11 02222234
Q ss_pred cceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE
Q 017335 155 SSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV 233 (373)
Q Consensus 155 g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~ 233 (373)
+|++|+.++.+.++++|+++++.+++.+++.+.|||.++ ....++++++|||+|+ |++|++++++|+.+|+ +|+++
T Consensus 132 -~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 132 -GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred -cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 899999999999999999999999999999999999965 7788999999999998 9999999999999999 78888
Q ss_pred cCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCc
Q 017335 234 DINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP 312 (373)
Q Consensus 234 ~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~ 312 (373)
++++ +.+.++++|++.+++... ..+.+ ...+.+ ++|++||++|+.. ++.++++++++ |+++.+|.. ....
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~-~~~~ 279 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAI-AGPV 279 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEeccc-CCcc
Confidence 8665 888889999987766544 33333 445555 8999999999865 89999999997 999999864 2223
Q ss_pred cccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 313 ISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 313 ~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
.+++...++. ++++.++.... .+.+.++++++.++++++ +.|+++++.++++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~ 336 (350)
T cd08274 280 VELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAE 336 (350)
T ss_pred ccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHH
Confidence 4667766555 89999887543 578999999999998764 67787777776654
No 81
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-36 Score=291.80 Aligned_cols=297 Identities=20% Similarity=0.235 Sum_probs=237.3
Q ss_pred ccceeeEEeec-C-CC----CeEEEEE---ecCC-CCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccC--ccc
Q 017335 13 VIRCKAAICRI-P-GK----PLVIEEI---EVEP-PKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGH--EAV 80 (373)
Q Consensus 13 ~~~~ka~~~~~-~-~~----~l~~~~~---~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~--e~~ 80 (373)
+.+.|.+++.. + +. .+++++. +.|. +++|||||||.++++|+.|...+.+..... ..|+++|+ |++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~--~~p~~~G~~~~~~ 83 (348)
T PLN03154 6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSY--LPPFVPGQRIEGF 83 (348)
T ss_pred cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCC--CCCcCCCCeeEee
Confidence 34467788853 2 11 1777774 5553 579999999999999999876544322222 35789998 889
Q ss_pred EEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeee
Q 017335 81 GVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEY 160 (373)
Q Consensus 81 G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~ 160 (373)
|+|..+|+++++|++||+|+.. ++|+||
T Consensus 84 G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey 111 (348)
T PLN03154 84 GVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEY 111 (348)
T ss_pred EEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEE
Confidence 9999999999999999999632 279999
Q ss_pred EEeeccc--eEE--cCCCCChh-hhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc
Q 017335 161 SVVDITH--VVK--ITPHIPLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD 234 (373)
Q Consensus 161 ~~v~~~~--~~~--lP~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~ 234 (373)
+.++.+. +.+ +|++++++ ++++++++++|||+++.+...+++|++|||+|+ |++|++++|+||.+|+ +|++++
T Consensus 112 ~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~ 190 (348)
T PLN03154 112 SLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSA 190 (348)
T ss_pred EEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEc
Confidence 9998753 544 59999986 688899999999998878889999999999998 9999999999999999 899999
Q ss_pred CChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcc
Q 017335 235 INPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 313 (373)
Q Consensus 235 ~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~ 313 (373)
+++++.+.++ ++|+++++++++ ..++.+.+++.+++++|++||++|+. .+..++++++++ |+++.+|..... ..
T Consensus 191 ~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~ 265 (348)
T PLN03154 191 GSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIH-GRIAVCGMVSLN-SL 265 (348)
T ss_pred CCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccC-CEEEEECccccC-CC
Confidence 9999999987 799999999864 13677788877766899999999976 499999999997 999999974322 11
Q ss_pred -----ccCHHHHhh-CcEEEEeecCCCC--chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 314 -----SLNSIEILK-GRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 314 -----~~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
.++...++. ++++.|+..+.+. ..+.++++++++++|++++ ..|+++++++|+..+
T Consensus 266 ~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~~~A~~~l 332 (348)
T PLN03154 266 SASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESAPAALVGL 332 (348)
T ss_pred CCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHHHHHHHHH
Confidence 124445555 8999998654332 1356888999999999987 579999999998754
No 82
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3e-36 Score=289.79 Aligned_cols=296 Identities=21% Similarity=0.211 Sum_probs=237.2
Q ss_pred eeeEEeecCCC-CeEEEEEec----CCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcc--cEEEEEeCC
Q 017335 16 CKAAICRIPGK-PLVIEEIEV----EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA--VGVVESVGE 88 (373)
Q Consensus 16 ~ka~~~~~~~~-~l~~~~~~~----p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~--~G~V~~vG~ 88 (373)
+|+++...+.. .|++++.+. |+|+++||||||.+++||+.|++.+.|.+.... ..|+++|++. .|++..+|+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~-~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLY-LPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcccc-CCCcCCCCeEeccEEEEEEec
Confidence 56666555443 389999887 889999999999999999999998887543211 4678899754 456666888
Q ss_pred CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-cc
Q 017335 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-TH 167 (373)
Q Consensus 89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~ 167 (373)
.+++|++||+|+.. |+|+||+.+|+ ..
T Consensus 87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~ 114 (338)
T cd08295 87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD 114 (338)
T ss_pred CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence 88899999999632 27999999999 89
Q ss_pred eEEcC-CCCChh-hhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335 168 VVKIT-PHIPLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (373)
Q Consensus 168 ~~~lP-~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~ 244 (373)
++++| +++++. +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus 115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~ 193 (338)
T cd08295 115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK 193 (338)
T ss_pred eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99995 678887 788899999999998878889999999999998 9999999999999999 8999999999999999
Q ss_pred H-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCc----cccCHHH
Q 017335 245 K-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP----ISLNSIE 319 (373)
Q Consensus 245 ~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~----~~~~~~~ 319 (373)
+ +|+++++++++ ..++.+.+++.+++++|++||++|+.. +..++++++++ |+++.+|....... ...+...
T Consensus 194 ~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~ 269 (338)
T cd08295 194 NKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLN 269 (338)
T ss_pred HhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHH
Confidence 8 99999998654 146777787776568999999999854 89999999997 99999986432211 0123344
Q ss_pred Hhh-CcEEEEeecCCCCc--hhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 320 ILK-GRSVCGTYFGGLKP--RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 320 ~~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
++. ++++.++....... .+.+.++++++++|++++ ..|+++++.+|+..+
T Consensus 270 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~ 325 (338)
T cd08295 270 IIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGL 325 (338)
T ss_pred HhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHH
Confidence 444 78888865544321 345788999999999875 668999988887553
No 83
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.7e-35 Score=282.87 Aligned_cols=288 Identities=19% Similarity=0.193 Sum_probs=231.3
Q ss_pred ceeeEEeecC--CCC----eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCC
Q 017335 15 RCKAAICRIP--GKP----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGE 88 (373)
Q Consensus 15 ~~ka~~~~~~--~~~----l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~ 88 (373)
.|||+++.++ +.+ +++++.+.|+|+++||||||.+++||+.|...... .. .+|.++|+|++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~--~~p~v~G~e~~G~V~~--- 73 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LN--EGDTMIGTQVAKVIES--- 73 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CC--CCCcEecceEEEEEec---
Confidence 5899999983 332 88999999999999999999999999887542211 11 4678999999999995
Q ss_pred CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--
Q 017335 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT-- 166 (373)
Q Consensus 89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-- 166 (373)
.+++|++||||+.. ++|++|+.++.+
T Consensus 74 ~~~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~ 101 (329)
T cd08294 74 KNSKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQ 101 (329)
T ss_pred CCCCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccc
Confidence 44679999999742 168999999999
Q ss_pred -ceEEcCCCCC--h---hhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335 167 -HVVKITPHIP--L---GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 239 (373)
Q Consensus 167 -~~~~lP~~l~--~---~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~ 239 (373)
.++++|++++ + ..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus 102 ~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~ 180 (329)
T cd08294 102 PDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDK 180 (329)
T ss_pred cceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHH
Confidence 9999999988 2 2334677899999998888889999999999997 9999999999999999 89999999999
Q ss_pred HHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCC---c--cc
Q 017335 240 FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---P--IS 314 (373)
Q Consensus 240 ~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~---~--~~ 314 (373)
.++++++|+++++++++ .++.+.+.+.+++++|++||++|+.. +..++++++++ |+++.+|...... . ..
T Consensus 181 ~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~ 255 (329)
T cd08294 181 VAWLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGP 255 (329)
T ss_pred HHHHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCc
Confidence 99999999999999887 78888888877668999999999855 89999999997 9999998532211 1 11
Q ss_pred cCHHHHhh-CcEEEEeecCCCC--chhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 315 LNSIEILK-GRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 315 ~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
.....++. ++++.++...... ..+.+.++++++++|++++ ..|+++++.+|+..
T Consensus 256 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~ 315 (329)
T cd08294 256 YVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFENMPQAFIG 315 (329)
T ss_pred ccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHHHHHHHHHH
Confidence 22223344 8888887544321 1245778999999999875 56788888877654
No 84
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.8e-35 Score=282.90 Aligned_cols=277 Identities=21% Similarity=0.236 Sum_probs=224.7
Q ss_pred eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCC
Q 017335 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 107 (373)
Q Consensus 28 l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c 107 (373)
+++++.+.|+|++|||||||.++++|+.|.. |.+... ..|.++|.|++|+|+++|+ +|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~--~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~----- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK--EGDTMMGQQVARVVESKNV---ALPKGTIVLAS----- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC--CCCcEecceEEEEEEeCCC---CCCCCCEEEEe-----
Confidence 8899999999999999999999999996543 333222 3578999999999999874 59999999742
Q ss_pred CCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc----CCCCChhhh-hc
Q 017335 108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI----TPHIPLGIA-CL 182 (373)
Q Consensus 108 ~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l----P~~l~~~~a-a~ 182 (373)
++|++|+.++.+++.++ |++++++++ ++
T Consensus 86 -----------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~ 118 (325)
T TIGR02825 86 -----------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGT 118 (325)
T ss_pred -----------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHh
Confidence 16899999999998888 899999997 67
Q ss_pred cchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCcc
Q 017335 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 261 (373)
Q Consensus 183 l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~ 261 (373)
+++++.|||+++.+...+++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.+.++++|+++++++++ ..+
T Consensus 119 l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~ 195 (325)
T TIGR02825 119 VGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKS 195 (325)
T ss_pred cccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--ccc
Confidence 88899999998888899999999999997 9999999999999999 8999999999999999999999999875 124
Q ss_pred HHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCC---Cccc--cCHHHHhh-CcEEEEeecCCCC
Q 017335 262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---SPIS--LNSIEILK-GRSVCGTYFGGLK 335 (373)
Q Consensus 262 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---~~~~--~~~~~~~~-~~~i~g~~~~~~~ 335 (373)
+.+.++..+++++|++||++|+.. +..++++++++ |+++.+|..... ...+ .....+.. ++++.++....+.
T Consensus 196 ~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 273 (325)
T TIGR02825 196 LEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQ 273 (325)
T ss_pred HHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhh
Confidence 556666665558999999999876 89999999997 999999964321 1112 12333344 7888887644322
Q ss_pred ---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 336 ---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 336 ---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
..+.+.++++++++|++++ ..|+++++.+|+..+
T Consensus 274 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~ 313 (325)
T TIGR02825 274 GEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGM 313 (325)
T ss_pred hhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHH
Confidence 1356889999999999986 667888888887653
No 85
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1.3e-35 Score=285.91 Aligned_cols=283 Identities=19% Similarity=0.170 Sum_probs=219.8
Q ss_pred eEEEEEecCCCC-CCeEEEEEeeeeccccchhccc---CCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeC
Q 017335 28 LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWK---SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 103 (373)
Q Consensus 28 l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~---g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 103 (373)
+++++.|.|+|. ++||||||.++|||+.|..... +..... .+|.++|||++|+|+++|+++++|++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLA--PWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCC--CccCCCceEeeEEEEEeccCCCCCCCCCEEEecC
Confidence 888999999875 9999999999999998853222 111112 4678999999999999999999999999997421
Q ss_pred CCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhh----
Q 017335 104 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI---- 179 (373)
Q Consensus 104 ~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~---- 179 (373)
++|+||+++|++.++++|+++++.+
T Consensus 101 ---------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~ 129 (345)
T cd08293 101 ---------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYF 129 (345)
T ss_pred ---------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHH
Confidence 1799999999999999999864432
Q ss_pred hhccchhhhhHHHHHHHHhCCCCC--CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCC
Q 017335 180 ACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPA 255 (373)
Q Consensus 180 aa~l~~~~~ta~~~~~~~~~~~~~--~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~ 255 (373)
+++++.++.|||+++.+...++++ ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+.+++ +|++++++++
T Consensus 130 ~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~ 209 (345)
T cd08293 130 LGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK 209 (345)
T ss_pred hhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC
Confidence 445677899999988778888877 99999998 9999999999999998679999999999999876 9999999988
Q ss_pred CCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCC---Ccc--ccC--HHHHhh--CcEE
Q 017335 256 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---SPI--SLN--SIEILK--GRSV 326 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---~~~--~~~--~~~~~~--~~~i 326 (373)
+ .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... ... .++ ...+.. ++++
T Consensus 210 ~---~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (345)
T cd08293 210 T---DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITR 284 (345)
T ss_pred C---CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEE
Confidence 7 78888888887668999999999876 79999999997 999999853211 111 111 112222 4443
Q ss_pred EEeecCCCC--chhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 327 CGTYFGGLK--PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 327 ~g~~~~~~~--~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
.+....... ..+.++++++++++|++++ ..++++++.+|++.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~ 331 (345)
T cd08293 285 ERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQS 331 (345)
T ss_pred EEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHH
Confidence 333222211 1245778889999999976 34578888887654
No 86
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=3.2e-35 Score=282.52 Aligned_cols=298 Identities=22% Similarity=0.266 Sum_probs=245.0
Q ss_pred eeeEEeecCCCC---eEEEEEecCCCCC-CeEEEEEeeeeccccchhcccCCCCCCCC---CCCccccCcccEEEEEeCC
Q 017335 16 CKAAICRIPGKP---LVIEEIEVEPPKA-WEIRIKILCTSLCHSDVTFWKSSTDLPKL---PLPVIFGHEAVGVVESVGE 88 (373)
Q Consensus 16 ~ka~~~~~~~~~---l~~~~~~~p~~~~-~evlVkv~~~~i~~~D~~~~~g~~~~~~~---~~p~~~G~e~~G~V~~vG~ 88 (373)
|||+++..++++ +.+++.|.|.|.+ ++|+||+.++|+|++|+..+.|..+.... .+|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 899999988764 8999999998887 99999999999999999988876543210 1677999999999999999
Q ss_pred CCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccce
Q 017335 89 YVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHV 168 (373)
Q Consensus 89 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~ 168 (373)
++..|++||+|+.... .+ |+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~-----------------------------~~-------------------g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP-----------------------------GL-------------------GTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC-----------------------------CC-------------------ccchheEeccHHHe
Confidence 9999999999986421 12 38999999999999
Q ss_pred EEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hHHHHH
Q 017335 169 VKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIG 243 (373)
Q Consensus 169 ~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~----~~~~~~ 243 (373)
+++|+++++++++.+++.+.|||.++.+...++++++|||+|+ |++|++++++|+..|+ +|+++.+++ ++.+.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999998877788999999999988 9999999999999999 788887765 678888
Q ss_pred HHcCCceEEcCCCCCCc---cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH
Q 017335 244 KKFGITDFINPATCGDK---TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI 320 (373)
Q Consensus 244 ~~lga~~vi~~~~~~~~---~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~ 320 (373)
+++|++++++++. . ++...+..+.++++|++|||+|+.. +..++++++++ |+++.+|.... ....++...+
T Consensus 192 ~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~ 265 (341)
T cd08290 192 KALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLL 265 (341)
T ss_pred HhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHH
Confidence 8999999998875 4 6777777776558999999999876 77899999997 99999986432 2345555444
Q ss_pred hh-CcEEEEeecCCCC---c----hhHHHHHHHHHHcCCCCC---Ccc---cccCCCccccc
Q 017335 321 LK-GRSVCGTYFGGLK---P----RSDIATLAQKYLDKVHLR---SSF---HLCDPNSDSAG 368 (373)
Q Consensus 321 ~~-~~~i~g~~~~~~~---~----~~~~~~~~~~~~~g~i~~---~~~---~~~~~~~a~~~ 368 (373)
+. +.++.+....... . ...+.++++++.+|++.+ ..+ +++++.+++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~ 327 (341)
T cd08290 266 IFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLEEFKDALAN 327 (341)
T ss_pred hhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHHHHHHHHHH
Confidence 44 8999988654321 0 135888999999998875 445 77777776554
No 87
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.9e-34 Score=274.44 Aligned_cols=315 Identities=23% Similarity=0.275 Sum_probs=257.0
Q ss_pred eeeEEeecCC--CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPG--KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~--~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++...+ +.+++++.+.|.++++|++|++.++++|++|+....|..+... ..|.++|||++|+|+++|+.++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~ 79 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPV-KDPLIPLSDGAGEVVAVGEGVTRF 79 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCC-CCCcccccceeEEEEEeCCCCcCC
Confidence 7999999664 3388888888889999999999999999999998887654332 467889999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|++.....|+.+. ++.|.... ..|...+| +|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~~~~~~~~------~~~~~~~~---~~~~~~~g-------------------~~~~~~~~~~~~~~~lp~ 131 (336)
T cd08276 80 KVGDRVVPTFFPNWLDGP------PTAEDEAS---ALGGPIDG-------------------VLAEYVVLPEEGLVRAPD 131 (336)
T ss_pred CCCCEEEEeccccccccc------cccccccc---ccccccCc-------------------eeeeEEEecHHHeEECCC
Confidence 999999987766554433 33443221 13333345 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
++++.+++.+.+.+.+||.++.+...++++++|+|+|.|++|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus 132 ~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 210 (336)
T cd08276 132 HLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVIN 210 (336)
T ss_pred CCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEc
Confidence 999999999999999999988777889999999999889999999999999999 8999999999999999999999988
Q ss_pred CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeec
Q 017335 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF 331 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~ 331 (373)
.+. +.++.+.+...+++ ++|+++|+++... +..++++++++ |+++.+|..... ..+.....++. ++++.+...
T Consensus 211 ~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 285 (336)
T cd08276 211 YRT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAV 285 (336)
T ss_pred CCc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEec
Confidence 653 14577788888876 8999999998655 88999999997 999999974332 22344445455 999998876
Q ss_pred CCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 332 GGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
+. .+.+.+++++++++.+.+ +.|+++++++++..
T Consensus 286 ~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~ 322 (336)
T cd08276 286 GS---RAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRY 322 (336)
T ss_pred Cc---HHHHHHHHHHHHcCCcccccCcEEeHHHHHHHHHH
Confidence 54 578999999999887754 66777777776543
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=9.7e-35 Score=278.52 Aligned_cols=293 Identities=18% Similarity=0.186 Sum_probs=234.2
Q ss_pred eeEEeecC---CCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC
Q 017335 17 KAAICRIP---GKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE 91 (373)
Q Consensus 17 ka~~~~~~---~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 91 (373)
||+++..+ +.+ +++.++|.|+|+++||+|||.++++|+.|...+.+..+.. .+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~ 78 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA--GQPKILGWDAAGVVVAVGDEVT 78 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC--CCCcccceeeEEEEEEeCCCCC
Confidence 57778775 433 8888999999999999999999999999998887765443 5688999999999999999999
Q ss_pred ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (373)
Q Consensus 92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l 171 (373)
+|++||+|+... +...+| +|++|+.++++.++++
T Consensus 79 ~~~~Gd~V~~~~---------------------------~~~~~g-------------------~~~~~~~v~~~~~~~i 112 (336)
T TIGR02817 79 LFKPGDEVWYAG---------------------------DIDRPG-------------------SNAEFHLVDERIVGHK 112 (336)
T ss_pred CCCCCCEEEEcC---------------------------CCCCCC-------------------cccceEEEcHHHcccC
Confidence 999999997531 011223 8999999999999999
Q ss_pred CCCCChhhhhccchhhhhHHHHHHHHhCCCC-----CCEEEEECC-ChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHH
Q 017335 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGK 244 (373)
Q Consensus 172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~-----~~~VlI~G~-G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~ 244 (373)
|+++++++++.+++...|||.++....++++ +++|||+|+ |++|++++|+|+.+ |+ +|+++++++++.+.++
T Consensus 113 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~ 191 (336)
T TIGR02817 113 PKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVL 191 (336)
T ss_pred CCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHH
Confidence 9999999999999999999998878888877 999999997 99999999999998 99 9999999999999999
Q ss_pred HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-C
Q 017335 245 KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-G 323 (373)
Q Consensus 245 ~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~ 323 (373)
++|+++++++.. ++.+.+.+..++++|+++|++++...+...+++++++ |+++.++.. ..++...+.. +
T Consensus 192 ~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~ 261 (336)
T TIGR02817 192 ELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKS 261 (336)
T ss_pred HcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcc
Confidence 999999998643 5677777754448999999987766689999999997 999988532 1334444444 5
Q ss_pred cEEEEeecCCC--Cc-------hhHHHHHHHHHHcCCCCC---Cccc---ccCCCccccc
Q 017335 324 RSVCGTYFGGL--KP-------RSDIATLAQKYLDKVHLR---SSFH---LCDPNSDSAG 368 (373)
Q Consensus 324 ~~i~g~~~~~~--~~-------~~~~~~~~~~~~~g~i~~---~~~~---~~~~~~a~~~ 368 (373)
.++.+..+... .. .+.+.++++++.++++++ +.++ ++++.+|+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~a~~~ 321 (336)
T TIGR02817 262 ISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAANLKRAHAL 321 (336)
T ss_pred eEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHHHHHHHHHH
Confidence 77665433211 00 145788999999998865 3333 4556665543
No 89
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.9e-34 Score=274.35 Aligned_cols=296 Identities=21% Similarity=0.237 Sum_probs=243.2
Q ss_pred ceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335 15 RCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 15 ~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
||||+++..++.. +++++.+.|++.++||+|||.++++|+.|.....+..+... ..|.++|||++|+|+++|+++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vG~~v~~ 79 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPP-GSSEILGLEVAGYVEDVGSDVKR 79 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccceeeEEEEEEeCCCCCC
Confidence 6999999987752 67778888889999999999999999999988877543221 45678999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
+++||+|+... .+ |+|++|+.++.+.++++|
T Consensus 80 ~~~Gd~V~~~~------------------------------~~-------------------g~~~~~~~v~~~~~~~ip 110 (334)
T PTZ00354 80 FKEGDRVMALL------------------------------PG-------------------GGYAEYAVAHKGHVMHIP 110 (334)
T ss_pred CCCCCEEEEec------------------------------CC-------------------CceeeEEEecHHHcEeCC
Confidence 99999997531 11 389999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
+++++++++.+..++.+||.++.+...++++++|+|+|+ |++|++++++|+.+|+ +++.+.+++++.+.++++|++++
T Consensus 111 ~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 189 (334)
T PTZ00354 111 QGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIIL 189 (334)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEE
Confidence 999999999999999999998877788999999999997 9999999999999999 77778889999999999999999
Q ss_pred EcCCCCCCcc-HHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc-cCHHHHhh-CcEEE
Q 017335 252 INPATCGDKT-VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK-GRSVC 327 (373)
Q Consensus 252 i~~~~~~~~~-~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~-~~~~~~~~-~~~i~ 327 (373)
++... .+ +.+.+.+.+++ ++|++||++++.. +..++++++++ |+++.+|...+ ..+. ++...++. +.++.
T Consensus 190 ~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (334)
T PTZ00354 190 IRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASII 263 (334)
T ss_pred EecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEE
Confidence 98765 44 77788888766 8999999998755 88999999997 99999986433 2222 66665555 66888
Q ss_pred EeecCCCCc-------hhHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335 328 GTYFGGLKP-------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSA 367 (373)
Q Consensus 328 g~~~~~~~~-------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~ 367 (373)
++....... .+.+.+++++++++.+.+ +.++++++.+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 313 (334)
T PTZ00354 264 FSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHT 313 (334)
T ss_pred eeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHH
Confidence 876554221 133577889999998764 6677776666543
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=4.5e-34 Score=272.05 Aligned_cols=298 Identities=19% Similarity=0.225 Sum_probs=245.4
Q ss_pred eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC-CCCCCccccCcccEEEEEeCCCCCc
Q 017335 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
|||+++++++.+ +++.+.+.|.+.+++|+|++.++++|++|+....|..+.. ....|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 789999876543 6677777777899999999999999999998887754321 1156788999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
+++||+|+.... ..+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~----------------------------~~~-------------------g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG----------------------------RAG-------------------GGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC----------------------------CCC-------------------ceeeEEEEEchHHeEeCC
Confidence 999999986421 012 389999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
+++++++++.+++.+.|||. +.+...++++++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++++
T Consensus 114 ~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 99999999999999999965 678888999999999997 9999999999999999 89999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT 329 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 329 (373)
++.+. .++.+.+.+.+++ ++|+++|++|+.. ...++++++++ |+++.+|..... ..+++...++. ++++.+.
T Consensus 192 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08244 192 VDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGE-WTALDEDDARRRGVTVVGL 265 (324)
T ss_pred EecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCC-CCccCHHHHhhCCcEEEEe
Confidence 98876 6788888888776 8999999999876 78999999997 999999875432 23555444445 8898887
Q ss_pred ecCCCCc---hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 330 YFGGLKP---RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 330 ~~~~~~~---~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
....... .+.+.+++++++++++.. ..|+++++.++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~ 310 (324)
T cd08244 266 LGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAA 310 (324)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHH
Confidence 6544321 356788999999998754 67788887777643
No 91
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.4e-34 Score=274.95 Aligned_cols=296 Identities=20% Similarity=0.188 Sum_probs=240.0
Q ss_pred ceeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335 15 RCKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 15 ~~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
+||++++.+++.+ +++++++.|+|+++||+||+.++|+|++|+....+.++.. .+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~vG~~v~~ 78 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP--SLPSGLGTEAAGVVSKVGSGVKH 78 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC--CCCCccCcceEEEEEEeCCCCCC
Confidence 5899999987664 8899999999999999999999999999999888776544 56789999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
+++||+|+.... .. |+|++|+.++.+.++++|
T Consensus 79 ~~~Gd~V~~~~~-----------------------------~~-------------------g~~~~~v~v~~~~~~~lp 110 (327)
T PRK10754 79 IKVGDRVVYAQS-----------------------------AL-------------------GAYSSVHNVPADKAAILP 110 (327)
T ss_pred CCCCCEEEECCC-----------------------------CC-------------------cceeeEEEcCHHHceeCC
Confidence 999999974210 11 389999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
+++++++++.+++...+||.++.+...++++++|+|+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++++
T Consensus 111 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~ 189 (327)
T PRK10754 111 DAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQV 189 (327)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEE
Confidence 999999999988899999998777788999999999976 9999999999999999 89999999999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEE--E
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV--C 327 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i--~ 327 (373)
++.+. .++.+.+.+.+++ ++|++|||+|+.. ....+++++++ |+++.+|.... ....++...+.. +... .
T Consensus 190 ~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~ 263 (327)
T PRK10754 190 INYRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASG-PVTGVNLGILNQKGSLYVTR 263 (327)
T ss_pred EcCCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCC-CCCCcCHHHHhccCceEEec
Confidence 98876 7788888888887 8999999999755 88899999997 99999997432 122233333323 2111 1
Q ss_pred EeecCCCCch----hHHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335 328 GTYFGGLKPR----SDIATLAQKYLDKVHLR-----SSFHLCDPNSDSA 367 (373)
Q Consensus 328 g~~~~~~~~~----~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~ 367 (373)
....+...+. +.+.++++++++|++.+ +.|+++++.+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~ 312 (327)
T PRK10754 264 PSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHE 312 (327)
T ss_pred ceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHH
Confidence 1110111112 23566889999998863 6788888877654
No 92
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=7.2e-34 Score=271.69 Aligned_cols=295 Identities=23% Similarity=0.225 Sum_probs=241.9
Q ss_pred ceeeEEeecCCC----CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335 15 RCKAAICRIPGK----PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (373)
Q Consensus 15 ~~ka~~~~~~~~----~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (373)
.|||+++.+++. ++++++++.|.+.++||+|||.++++|++|+....|...... .+|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~-~~p~~~g~e~~G~v~~vG~~v 79 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGV-KPPFDCGFEGVGEVVAVGEGV 79 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCC-CCCcccCceeEEEEEEECCCC
Confidence 499999998665 488999999999999999999999999999998877654322 678899999999999999999
Q ss_pred CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (373)
Q Consensus 91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 170 (373)
+++++||+|+.... |+|++|+.++.+.+++
T Consensus 80 ~~~~~Gd~V~~~~~--------------------------------------------------g~~~s~~~v~~~~~~~ 109 (329)
T cd08250 80 TDFKVGDAVATMSF--------------------------------------------------GAFAEYQVVPARHAVP 109 (329)
T ss_pred CCCCCCCEEEEecC--------------------------------------------------cceeEEEEechHHeEE
Confidence 99999999986421 3899999999999999
Q ss_pred cCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (373)
Q Consensus 171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~ 249 (373)
+|++ +.+++.++..+.|||.++.+...++++++|+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|++
T Consensus 110 ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~ 186 (329)
T cd08250 110 VPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCD 186 (329)
T ss_pred CCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCc
Confidence 9997 35677888899999998877788999999999997 9999999999999999 899999999999999999998
Q ss_pred eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCC---------CccccCHHHH
Q 017335 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---------SPISLNSIEI 320 (373)
Q Consensus 250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~---------~~~~~~~~~~ 320 (373)
++++.+. .++.+.+....++++|++||++|+.. +..++++++++ |+++.+|..... ....++...+
T Consensus 187 ~v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 261 (329)
T cd08250 187 RPINYKT---EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLL 261 (329)
T ss_pred eEEeCCC---ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHh
Confidence 8988776 66766676665458999999999754 89999999997 999999864321 1112333333
Q ss_pred hhCcEEEEeecCCCC--chhHHHHHHHHHHcCCCCC-----CcccccCCCccccc
Q 017335 321 LKGRSVCGTYFGGLK--PRSDIATLAQKYLDKVHLR-----SSFHLCDPNSDSAG 368 (373)
Q Consensus 321 ~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~~ 368 (373)
.++.++.++.+.... ..+.+.+++++++++.+.+ +.++++++++|+..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ 316 (329)
T cd08250 262 AKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDY 316 (329)
T ss_pred hcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHH
Confidence 448898888654322 2356788999999998765 34788888777654
No 93
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=9.3e-34 Score=270.03 Aligned_cols=299 Identities=17% Similarity=0.177 Sum_probs=233.9
Q ss_pred eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++..++. ++++++.|.|.++++||+||+.++++|++|+..+.|..+... .+|.++|||++|+|+++ +++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~--~~~~~ 77 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTR-NYPHTPGIDAAGTVVSS--DDPRF 77 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCC-CCCCccCcccEEEEEEe--CCCCC
Confidence 79999999875 599999999999999999999999999999998888754322 46789999999999999 45679
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|+.... ..|+..+| +|++|+.++++.++++|+
T Consensus 78 ~~Gd~V~~~~~------------------------~~g~~~~g-------------------~~~~~~~v~~~~~~~lp~ 114 (325)
T cd05280 78 REGDEVLVTGY------------------------DLGMNTDG-------------------GFAEYVRVPADWVVPLPE 114 (325)
T ss_pred CCCCEEEEccc------------------------ccCCCCCc-------------------eeEEEEEEchhhEEECCC
Confidence 99999986421 13444445 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHh--CCC-CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVA--GVE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~--~~~-~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~ 249 (373)
++++++++.+++.+.+||.++.... .+. .+++|+|+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~ 193 (325)
T cd05280 115 GLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGAS 193 (325)
T ss_pred CCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCc
Confidence 9999999999999999999765543 335 3579999998 9999999999999999 799999999999999999999
Q ss_pred eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEE
Q 017335 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCG 328 (373)
Q Consensus 250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g 328 (373)
++++.+. .. .+..+....+++|++||++++.. +..++++++++ |+++.+|..... ..+++...++ ++.++.+
T Consensus 194 ~~~~~~~---~~-~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~ 266 (325)
T cd05280 194 EVLDRED---LL-DESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLG 266 (325)
T ss_pred EEEcchh---HH-HHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEE
Confidence 9988654 21 12222233338999999999865 99999999997 999999975332 2245555553 4889888
Q ss_pred eecCCCCc---hhHHHHHHHHHHcCCCC--CCcccccCCCccccc
Q 017335 329 TYFGGLKP---RSDIATLAQKYLDKVHL--RSSFHLCDPNSDSAG 368 (373)
Q Consensus 329 ~~~~~~~~---~~~~~~~~~~~~~g~i~--~~~~~~~~~~~a~~~ 368 (373)
........ .+.+..+.+++..+... .+.|+++++.+++..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 311 (325)
T cd05280 267 IDSVNCPMELRKQVWQKLATEWKPDLLEIVVREISLEELPEAIDR 311 (325)
T ss_pred EEeecCchhHHHHHHHHHHHHHhcCCccceeeEecHHHHHHHHHH
Confidence 76544321 13344555556666443 277888887777654
No 94
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=1.4e-33 Score=261.00 Aligned_cols=270 Identities=29% Similarity=0.479 Sum_probs=226.4
Q ss_pred eEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcC
Q 017335 42 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC 121 (373)
Q Consensus 42 evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c 121 (373)
||+|+|.++++|+.|+..+.+..+.. ..+|.++|||++|+|+++|++++.|++||+|+..+...|+.|.+|+. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPP-PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcC-CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hC
Confidence 68999999999999999988876411 15688999999999999999999999999999999999999999997 77
Q ss_pred ccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCC
Q 017335 122 SKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 201 (373)
Q Consensus 122 ~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~ 201 (373)
+.... .+....| +|++|+.++.+.++++|+++++++++.++.++.+||.++.....++
T Consensus 76 ~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~ 133 (271)
T cd05188 76 PGGGI---LGEGLDG-------------------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLK 133 (271)
T ss_pred CCCCE---eccccCC-------------------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCC
Confidence 76654 4444455 8999999999999999999999999999999999999877776679
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEEC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 280 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~ 280 (373)
++++|||+|+|++|++++++++..|. +|+++++++++.+.++++|++++++... .++.+.+. ...+ ++|+++|+
T Consensus 134 ~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~ 208 (271)
T cd05188 134 PGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDA 208 (271)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEEC
Confidence 99999999996699999999999998 9999999999999999999999988776 66666666 4444 89999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCCCchhHHHHHHHHH
Q 017335 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQKY 347 (373)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 347 (373)
++.......++++++++ |+++.+|..............+.+++++.++..+. .++++++++++
T Consensus 209 ~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 271 (271)
T cd05188 209 VGGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDLL 271 (271)
T ss_pred CCCHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhhC
Confidence 99855589999999997 99999997554333222333333499999987655 45677777653
No 95
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.1e-33 Score=265.83 Aligned_cols=297 Identities=16% Similarity=0.170 Sum_probs=234.3
Q ss_pred eeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 17 ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||+++...+.+ ++++++|.|.+.+++|+||+.++++|++|+..+.|..+... .+|.++|||++|+|++ .++..|+
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~--~~~~~~~ 77 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVR-SYPMIPGIDAAGTVVS--SEDPRFR 77 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCC-CCCccceeeeEEEEEe--cCCCCCC
Confidence 68888876663 78999999999999999999999999999998888653321 4688999999999998 5567899
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|++... ..|...+| +|++|+.+|.+.++++|++
T Consensus 78 ~Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~~~~~~~~~iP~~ 114 (323)
T TIGR02823 78 EGDEVIVTGY------------------------GLGVSHDG-------------------GYSQYARVPADWLVPLPEG 114 (323)
T ss_pred CCCEEEEccC------------------------CCCCCCCc-------------------cceEEEEEchhheEECCCC
Confidence 9999986531 12222344 8999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHH--hCCCCCC-EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKV--AGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD 250 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~--~~~~~~~-~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~ 250 (373)
+++++++.+++.+.+|+.++... ..+.+++ +|+|+|+ |++|++++++|+.+|+ +|+++.+++++.+.++++|+++
T Consensus 115 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 193 (323)
T TIGR02823 115 LSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASE 193 (323)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcE
Confidence 99999999999999998865433 3488898 9999998 9999999999999999 8888888888889999999999
Q ss_pred EEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335 251 FINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT 329 (373)
Q Consensus 251 vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 329 (373)
+++.++ .+. .+..+.++++|+++||+|+.. +..++++++++ |+++.+|... ....+++...++. ++++.+.
T Consensus 194 ~~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T TIGR02823 194 VIDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGI 265 (323)
T ss_pred EEcccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEE
Confidence 988754 332 444555447999999999775 89999999997 9999999753 2334444455534 8999887
Q ss_pred ecCCCC---chhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335 330 YFGGLK---PRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG 368 (373)
Q Consensus 330 ~~~~~~---~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~ 368 (373)
...... ..+.+..+.+++..+++.. +.|+++++.+++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~ 309 (323)
T TIGR02823 266 DSVYCPMALREAAWQRLATDLKPRNLESITREITLEELPEALEQ 309 (323)
T ss_pred eccccCchhHHHHHHHHHHHhhcCCCcCceeeecHHHHHHHHHH
Confidence 543221 1233566777787887653 77888888877654
No 96
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=3.8e-33 Score=266.22 Aligned_cols=300 Identities=15% Similarity=0.157 Sum_probs=228.4
Q ss_pred eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++.+++++ +++++.|.|.|.++||+||+.++++|++|.....+...... .+|.++|||++|+|+++| ++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~V~~~~--~~~~ 77 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVK-RYPFIPGIDLAGTVVESN--DPRF 77 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccC-CCCcCcccceeEEEEEcC--CCCC
Confidence 799999988764 78899999999999999999999999999876543211111 468899999999999964 4679
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|++... ..|...+| +|++|+.++++.++++|+
T Consensus 78 ~~Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~v~~~~~~~~p~ 114 (326)
T cd08289 78 KPGDEVIVTSY------------------------DLGVSHHG-------------------GYSEYARVPAEWVVPLPK 114 (326)
T ss_pred CCCCEEEEccc------------------------ccCCCCCC-------------------cceeEEEEcHHHeEECCC
Confidence 99999986532 12333345 999999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHh--C-CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVA--G-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~--~-~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~ 249 (373)
++++++++.+++.+.|||.++.... . ...+++|||+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|++
T Consensus 115 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~ 193 (326)
T cd08289 115 GLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAK 193 (326)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCC
Confidence 9999999999999999998764432 2 345789999998 9999999999999999 899999999999999999999
Q ss_pred eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEE
Q 017335 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG 328 (373)
Q Consensus 250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g 328 (373)
++++.++ . ..+.+.+++++++|++||++|+.. +..++++++++ |+++.+|.... ...+++...++. ++++.+
T Consensus 194 ~v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~ 266 (326)
T cd08289 194 EVIPREE---L-QEESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLG 266 (326)
T ss_pred EEEcchh---H-HHHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEE
Confidence 9998765 3 344555554448999999999854 89999999997 99999997532 334444555544 899988
Q ss_pred eecCCC-C--chhHHHHHHHHHHcCC-C--CCCcccccCCCcccccc
Q 017335 329 TYFGGL-K--PRSDIATLAQKYLDKV-H--LRSSFHLCDPNSDSAGL 369 (373)
Q Consensus 329 ~~~~~~-~--~~~~~~~~~~~~~~g~-i--~~~~~~~~~~~~a~~~~ 369 (373)
...... . ..+.+..+.+.+.... + ..+.|+++++.+++..+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~ 313 (326)
T cd08289 267 IDSVECPMELRRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQI 313 (326)
T ss_pred EEeEecCchHHHHHHHHHHhhcCccccccccceEeeHHHHHHHHHHH
Confidence 753221 1 1122333333333121 1 24778888888776553
No 97
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=2.9e-33 Score=266.42 Aligned_cols=284 Identities=24% Similarity=0.290 Sum_probs=241.0
Q ss_pred eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCC
Q 017335 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 107 (373)
Q Consensus 28 l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c 107 (373)
+++++.+.|.+.+++|+||+.++++|+.|...+.+...... .+|.++|||++|+|+++|++++++++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRP-PLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG--- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCC-CCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC---
Confidence 66778888899999999999999999999998877653322 56789999999999999999999999999986531
Q ss_pred CCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhh
Q 017335 108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187 (373)
Q Consensus 108 ~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~ 187 (373)
+ |+|++|+.++.+.++++|+++++.+++.+++..
T Consensus 90 ---------------------------~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~ 123 (323)
T cd05282 90 ---------------------------E-------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINP 123 (323)
T ss_pred ---------------------------C-------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccH
Confidence 1 389999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHH
Q 017335 188 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266 (373)
Q Consensus 188 ~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i 266 (373)
.+||.++.+...+.++++|||+|+ |.+|++++++|+.+|+ +|+++.+++++.+.++++|++++++++. .++...+
T Consensus 124 ~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~ 199 (323)
T cd05282 124 LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRV 199 (323)
T ss_pred HHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHH
Confidence 999998878778899999999988 8999999999999999 8999999999999999999999999876 6788888
Q ss_pred HHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEeecCCCCc-------h
Q 017335 267 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKP-------R 337 (373)
Q Consensus 267 ~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~ 337 (373)
.+.+++ ++|++|||+|+.. ....+++++++ |+++.+|..... ...++...+. ++.++.+.....+.. .
T Consensus 200 ~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (323)
T cd05282 200 KEATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQ 276 (323)
T ss_pred HHHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHH
Confidence 888877 8999999999877 67889999997 999999875432 3456666666 489998887655321 2
Q ss_pred hHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 338 SDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 338 ~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
+.+.+++++++++++.+ +.|+++++.+++..
T Consensus 277 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~ 310 (323)
T cd05282 277 ETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAA 310 (323)
T ss_pred HHHHHHHHHHhCCCcccCccceecHHHHHHHHHH
Confidence 45888999999998864 66788877776654
No 98
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4e-33 Score=264.54 Aligned_cols=297 Identities=21% Similarity=0.280 Sum_probs=238.3
Q ss_pred eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
||++++..++. .+++.+.+.|.+.++||+||+.++++|+.|+....+..+.. ..|.++|||++|+|+++|. .++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~vG~--~~~ 76 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV--KFPRVLGIEAVGEVEEAPG--GTF 76 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCccccceeEEEEEEecC--CCC
Confidence 68899987654 26777888888999999999999999999999888765443 5678999999999999995 579
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|+.... ..+...+| +|++|+.++...++++|+
T Consensus 77 ~~Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~~~~~~~~~ip~ 113 (320)
T cd08243 77 TPGQRVATAMG------------------------GMGRTFDG-------------------SYAEYTLVPNEQVYAIDS 113 (320)
T ss_pred CCCCEEEEecC------------------------CCCCCCCc-------------------ccceEEEcCHHHcEeCCC
Confidence 99999987532 01212233 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++++++.+++++.|||.++.+...++++++|||+|+ |++|++++++|+.+|+ +|+++++++++.+.++++|+++++
T Consensus 114 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 192 (320)
T cd08243 114 DLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVV 192 (320)
T ss_pred CCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEE
Confidence 99999999999999999998877788999999999998 9999999999999999 899999999999999999999888
Q ss_pred cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcc-ccCHHHH---hhCcEEEE
Q 017335 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEI---LKGRSVCG 328 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~-~~~~~~~---~~~~~i~g 328 (373)
+. . .++.+.+.++ ++++|+++|++|+.. +..++++++++ |+++.+|........ +...... .+++++.+
T Consensus 193 ~~-~---~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (320)
T cd08243 193 ID-D---GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTG 265 (320)
T ss_pred ec-C---ccHHHHHHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEe
Confidence 64 3 4677777777 448999999999855 89999999997 999999974322211 1222222 23777777
Q ss_pred eecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 329 TYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
....... .+.+.+++++++++.+.+ +.|+++++.+++..
T Consensus 266 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~ 307 (320)
T cd08243 266 SSSGDVP-QTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHAY 307 (320)
T ss_pred cchhhhh-HHHHHHHHHHHHCCceecccccEEcHHHHHHHHHH
Confidence 6543322 356888999999998764 67788877776544
No 99
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=7.6e-33 Score=262.24 Aligned_cols=286 Identities=20% Similarity=0.274 Sum_probs=231.8
Q ss_pred cCCCCeEEEEEecCCCCCCeEEEEEeeeeccccchhcc-cCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEe
Q 017335 23 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 101 (373)
Q Consensus 23 ~~~~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 101 (373)
+++. +++++++.|++.++||+||+.++++|++|+..+ .+......+.+|.++|||++|+|+++|++++++++||+|+.
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4444 899999999999999999999999999999887 66542211135789999999999999999999999999986
Q ss_pred eCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhh
Q 017335 102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181 (373)
Q Consensus 102 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa 181 (373)
... |+|++|+.++++.++++|+++ ..++
T Consensus 82 ~~~--------------------------------------------------g~~~~~~~v~~~~~~~lP~~~--~~~~ 109 (312)
T cd08269 82 LSG--------------------------------------------------GAFAEYDLADADHAVPLPSLL--DGQA 109 (312)
T ss_pred ecC--------------------------------------------------CcceeeEEEchhheEECCCch--hhhH
Confidence 431 389999999999999999998 2333
Q ss_pred ccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCcc
Q 017335 182 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 261 (373)
Q Consensus 182 ~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~ 261 (373)
....++++++.++. ...++++++|+|+|+|++|++++++|+.+|+++|+++.+++++.++++++|++++++.+. .+
T Consensus 110 ~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~ 185 (312)
T cd08269 110 FPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EA 185 (312)
T ss_pred HhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cC
Confidence 32368889998654 788999999999988999999999999999933999999999999999999999998766 77
Q ss_pred HHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCC-Cchh
Q 017335 262 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL-KPRS 338 (373)
Q Consensus 262 ~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~-~~~~ 338 (373)
+.+.+.+++++ ++|+++||+|.......++++++++ |+++.+|... ....++++..+.. +.++.+...... ...+
T Consensus 186 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (312)
T cd08269 186 IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLE 263 (312)
T ss_pred HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhh
Confidence 88888888876 8999999998877789999999997 9999999743 3344556554444 778777643322 1247
Q ss_pred HHHHHHHHHHcCCCCC-----CcccccCCCcccc
Q 017335 339 DIATLAQKYLDKVHLR-----SSFHLCDPNSDSA 367 (373)
Q Consensus 339 ~~~~~~~~~~~g~i~~-----~~~~~~~~~~a~~ 367 (373)
.+++++++++++++.+ +.|+++++.+++.
T Consensus 264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~ 297 (312)
T cd08269 264 GMREAVKLIADGRLDLGSLLTHEFPLEELGDAFE 297 (312)
T ss_pred HHHHHHHHHHcCCCCchhheeeeecHHHHHHHHH
Confidence 7999999999998874 4477777776654
No 100
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=3e-33 Score=269.18 Aligned_cols=296 Identities=25% Similarity=0.279 Sum_probs=235.3
Q ss_pred eeeEEeecCC-CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPG-KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~-~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
|||++++.++ ..+++++++.|.|+++||+||+.++++|++|+....+.. .. .+|.++|||++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~--~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IP--SYPAILGCDFAGTVVEVGSGVTRFK 77 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-cc--CCCceeeeeeeEEEEEeCCCcCcCC
Confidence 7899999884 238999999999999999999999999999998875554 11 3567899999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|+......|+ +...+ |+|++|+.++.+.++++|++
T Consensus 78 ~Gd~V~~~~~~~~~----------------------~~~~~-------------------g~~~~~~~v~~~~~~~ip~~ 116 (339)
T cd08249 78 VGDRVAGFVHGGNP----------------------NDPRN-------------------GAFQEYVVADADLTAKIPDN 116 (339)
T ss_pred CCCEEEEEeccccC----------------------CCCCC-------------------CcccceEEechhheEECCCC
Confidence 99999876532211 11123 38999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCC----------CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGV----------EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~----------~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~ 243 (373)
+++++++.+++.+.|||.++.+...+ .++++|||+|+ |++|++++++|+.+|+ +|+++. ++++.+.+
T Consensus 117 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~ 194 (339)
T cd08249 117 ISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLV 194 (339)
T ss_pred CCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHH
Confidence 99999999999999999987666544 78999999998 8999999999999999 888887 56888999
Q ss_pred HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhcc--CCceEEEEcccCCCCccccCHHHHh
Q 017335 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE--GWGKTVILGVEMHGSPISLNSIEIL 321 (373)
Q Consensus 244 ~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~~G~~v~~G~~~~~~~~~~~~~~~~ 321 (373)
+++|++++++.+. .++.+.+.+.+++++|++||++|.+..+..+++++++ + |+++.+|...... .+.
T Consensus 195 ~~~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~-------~~~ 263 (339)
T cd08249 195 KSLGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET-------EPR 263 (339)
T ss_pred HhcCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc-------cCC
Confidence 9999999999877 7788888877766899999999985559999999999 9 9999998743321 111
Q ss_pred hCcEEEE---eecC------CCCchhHHHHHHHHHHcCCCCC---Cccc--ccCCCccccc
Q 017335 322 KGRSVCG---TYFG------GLKPRSDIATLAQKYLDKVHLR---SSFH--LCDPNSDSAG 368 (373)
Q Consensus 322 ~~~~i~g---~~~~------~~~~~~~~~~~~~~~~~g~i~~---~~~~--~~~~~~a~~~ 368 (373)
.+.++.. ..+. .......+.+++++++++++.+ ..++ ++++.++++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~ 324 (339)
T cd08249 264 KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDL 324 (339)
T ss_pred CCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHH
Confidence 1222222 2111 1111355778999999998876 4455 7777776554
No 101
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.4e-33 Score=260.94 Aligned_cols=282 Identities=18% Similarity=0.222 Sum_probs=229.9
Q ss_pred eeeEEeecCCC-CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 16 CKAAICRIPGK-PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 16 ~ka~~~~~~~~-~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||++++.+.+. .+++++.+.|.+.++||+||+.++++|+.|.....+. ..|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~~~~ 74 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGSGPA 74 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCCCCC
Confidence 68999987542 2777788999999999999999999999999876521 3456899999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|+... .+ |+|++|+.++.+.++++|++
T Consensus 75 ~Gd~V~~~~------------------------------~~-------------------g~~~~~~~v~~~~~~~ip~~ 105 (305)
T cd08270 75 VGARVVGLG------------------------------AM-------------------GAWAELVAVPTGWLAVLPDG 105 (305)
T ss_pred CCCEEEEec------------------------------CC-------------------cceeeEEEEchHHeEECCCC
Confidence 999997532 11 38999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
+++++++++++.+.|||+++.+.... ++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus 106 ~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 183 (305)
T cd08270 106 VSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVV 183 (305)
T ss_pred CCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 99999999999999999976555444 6999999998 9999999999999999 8999999999999999999877664
Q ss_pred CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh---CcEEEEee
Q 017335 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK---GRSVCGTY 330 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~---~~~i~g~~ 330 (373)
... ++.++++|+++|++|+.. +..++++++.+ |+++.+|... .....++...+.. +.++.++.
T Consensus 184 ~~~-----------~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 249 (305)
T cd08270 184 GGS-----------ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFF 249 (305)
T ss_pred ccc-----------cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEE
Confidence 332 122347999999999875 89999999997 9999999754 3334556555544 78888886
Q ss_pred cCC-CCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 331 FGG-LKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~-~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
+.. ....+.+..++++++++++.+ +.++++++++++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~ 291 (305)
T cd08270 250 LYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEA 291 (305)
T ss_pred ccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHH
Confidence 653 112467889999999999975 56777777776654
No 102
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.8e-32 Score=262.70 Aligned_cols=295 Identities=20% Similarity=0.186 Sum_probs=239.2
Q ss_pred eeeEEeecCCCC-----eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCC
Q 017335 16 CKAAICRIPGKP-----LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYV 90 (373)
Q Consensus 16 ~ka~~~~~~~~~-----l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v 90 (373)
|||++++++++. +++++++.|.+.+++|+|++.++++|++|+..+.+..+.. .+|.++|||++|+|+++|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~v 78 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVP--GQPKILGWDASGVVEAVGSEV 78 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCC--CCCcccccceEEEEEEcCCCC
Confidence 689999998763 5566778888899999999999999999999887765433 567789999999999999999
Q ss_pred CccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEE
Q 017335 91 EEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVK 170 (373)
Q Consensus 91 ~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ 170 (373)
+.|++||+|+.... +..+| +|++|+.++.+.+++
T Consensus 79 ~~~~~Gd~V~~~~~---------------------------~~~~g-------------------~~~~~~~v~~~~~~~ 112 (336)
T cd08252 79 TLFKVGDEVYYAGD---------------------------ITRPG-------------------SNAEYQLVDERIVGH 112 (336)
T ss_pred CCCCCCCEEEEcCC---------------------------CCCCc-------------------cceEEEEEchHHeee
Confidence 99999999985311 01223 899999999999999
Q ss_pred cCCCCChhhhhccchhhhhHHHHHHHHhCCCC-----CCEEEEECC-ChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHH
Q 017335 171 ITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIG 243 (373)
Q Consensus 171 lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~-----~~~VlI~G~-G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~ 243 (373)
+|+++++++++.+++.+.+||.++.+...+++ +++|+|+|+ |++|++++++|+.+| + +|+++++++++.+.+
T Consensus 113 ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~ 191 (336)
T cd08252 113 KPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWV 191 (336)
T ss_pred CCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHH
Confidence 99999999999999999999998878888887 999999986 999999999999999 7 999999999999999
Q ss_pred HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-h
Q 017335 244 KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-K 322 (373)
Q Consensus 244 ~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~ 322 (373)
+++|++++++.+. ++.+.+.....+++|++||++|....+..++++++++ |+++.+|... ..++...+. +
T Consensus 192 ~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~ 262 (336)
T cd08252 192 KELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSK 262 (336)
T ss_pred HhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----Ccccchhhhcc
Confidence 9999999998763 4555665443348999999999766699999999997 9999998642 234444443 4
Q ss_pred CcEEEEeecCCC---------CchhHHHHHHHHHHcCCCCC------CcccccCCCccccc
Q 017335 323 GRSVCGTYFGGL---------KPRSDIATLAQKYLDKVHLR------SSFHLCDPNSDSAG 368 (373)
Q Consensus 323 ~~~i~g~~~~~~---------~~~~~~~~~~~~~~~g~i~~------~~~~~~~~~~a~~~ 368 (373)
+.++.+..+... ...+.+.++++++.+|.+.+ +.++++++.+++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~ 323 (336)
T cd08252 263 SASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHAL 323 (336)
T ss_pred cceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHH
Confidence 888887654321 11245788999999998875 23677777776654
No 103
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=4.8e-32 Score=256.35 Aligned_cols=296 Identities=23% Similarity=0.293 Sum_probs=244.6
Q ss_pred eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++..++.+ +++.+.+.|.+.+++|+||+.++++|++|+..+.+..+... .+|.++|||++|+|+++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vg~~~~~~ 79 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPP-GASDILGLEVAGVVVAVGPGVTGW 79 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCC-CCCCcccceeEEEEEeeCCCCCCC
Confidence 799999885543 77888888888999999999999999999988877553322 567899999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|+... .+| +|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~------------------------------~~g-------------------~~~~~~~~~~~~~~~~p~ 110 (323)
T cd05276 80 KVGDRVCALL------------------------------AGG-------------------GYAEYVVVPAGQLLPVPE 110 (323)
T ss_pred CCCCEEEEec------------------------------CCC-------------------ceeEEEEcCHHHhccCCC
Confidence 9999997532 112 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++.+++.++.++.++|.++.+...+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd05276 111 GLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAI 189 (323)
T ss_pred CCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999998877788999999999997 8999999999999999 899999999999999889998888
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEee
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTY 330 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~~ 330 (373)
+... .++.+.+...+.+ ++|+++|+.|+.. +...+++++++ |+++.+|..... ...++...++ +++++.++.
T Consensus 190 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 263 (323)
T cd05276 190 NYRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGST 263 (323)
T ss_pred eCCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEee
Confidence 8776 6777778777766 8999999999877 88899999997 999999874332 2355555554 489999886
Q ss_pred cCCCCc-------hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 331 FGGLKP-------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~-------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
...... .+.+.++++++.++++.+ ..|+++++.+++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 311 (323)
T cd05276 264 LRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRR 311 (323)
T ss_pred ccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHH
Confidence 554311 133577888898988754 66777777766544
No 104
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.2e-31 Score=255.60 Aligned_cols=298 Identities=15% Similarity=0.162 Sum_probs=234.7
Q ss_pred eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++.+++. .+++++.|.|+|+++||+||+.++++|++|...+.+...... .+|.++|||++|+|++ ++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~--~~~~~~ 77 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVR-TFPLVPGIDLAGTVVE--SSSPRF 77 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccC-CCCCccccceEEEEEe--CCCCCC
Confidence 78999998774 388999999999999999999999999999988877643221 4678899999999999 677789
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|+.... ..+...+| +|++|+.++.+.++++|+
T Consensus 78 ~~Gd~V~~~~~------------------------~~~~~~~g-------------------~~~~~~~v~~~~~~~lp~ 114 (324)
T cd08288 78 KPGDRVVLTGW------------------------GVGERHWG-------------------GYAQRARVKADWLVPLPE 114 (324)
T ss_pred CCCCEEEECCc------------------------cCCCCCCC-------------------cceeEEEEchHHeeeCCC
Confidence 99999986421 01111233 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHH--HHhCCC-CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc
Q 017335 174 HIPLGIACLLSCGVSTGVGAAW--KVAGVE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT 249 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~--~~~~~~-~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~ 249 (373)
++++++++.+++.+++++.++. +..... ++++|||+|+ |++|++++++|+.+|+ +|++++.++++.+.++++|++
T Consensus 115 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~ 193 (324)
T cd08288 115 GLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGAS 193 (324)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCC
Confidence 9999999999999999987643 224455 6789999998 9999999999999999 899999999999999999999
Q ss_pred eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH-hhCcEEEE
Q 017335 250 DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCG 328 (373)
Q Consensus 250 ~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g 328 (373)
+++++++ ....+..++.+++|.++|+++... +..++..++.+ |+++.+|.... ...+++...+ .++.++.+
T Consensus 194 ~~~~~~~-----~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08288 194 EIIDRAE-----LSEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLG 265 (324)
T ss_pred EEEEcch-----hhHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEE
Confidence 9998765 222455555557999999999754 77888999997 99999997532 2334455555 34899988
Q ss_pred eecCCCC---chhHHHHHHHHHHcCCCCC--CcccccCCCccccc
Q 017335 329 TYFGGLK---PRSDIATLAQKYLDKVHLR--SSFHLCDPNSDSAG 368 (373)
Q Consensus 329 ~~~~~~~---~~~~~~~~~~~~~~g~i~~--~~~~~~~~~~a~~~ 368 (373)
....... ..+.+..+++++.++++.+ +.++++++++++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~ 310 (324)
T cd08288 266 IDSVMAPIERRRAAWARLARDLDPALLEALTREIPLADVPDAAEA 310 (324)
T ss_pred EEeecccchhhHHHHHHHHHHHhcCCccccceeecHHHHHHHHHH
Confidence 7533322 2345777888888887764 77888888777654
No 105
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.3e-32 Score=262.85 Aligned_cols=286 Identities=23% Similarity=0.326 Sum_probs=217.6
Q ss_pred eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCC--CCCCccccCcccEE---EEEeC-CCCCccCCCCEEEe
Q 017335 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--LPLPVIFGHEAVGV---VESVG-EYVEEVKERDLVLP 101 (373)
Q Consensus 28 l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V~~ 101 (373)
...++.++|.|++++++|++.++++|+.|+.+..|.+.... ..+|.+++.++.|+ +...| ..+..+..||++..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 55677899999999999999999999999999998865441 14664445544444 34444 22334555555532
Q ss_pred eCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhh
Q 017335 102 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 181 (373)
Q Consensus 102 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa 181 (373)
. .. .|+|+||+++|+..++++|++++++++|
T Consensus 100 ~------------------------------~~-------------------~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F------------------------------LS-------------------SGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c------------------------------cC-------------------CCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 12 2499999999999999999999999999
Q ss_pred ccchhhhhHHHHHHHHh------CCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC
Q 017335 182 LLSCGVSTGVGAAWKVA------GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 182 ~l~~~~~ta~~~~~~~~------~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~ 254 (373)
+++.+..|||+++.... ++++|++|||+|+ |++|++++|+|++.|+ ..+++.+++++.++++++||++++|+
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 8999999999987 8999999999999996 66666679999999999999999999
Q ss_pred CCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH---hhCcEE-----
Q 017335 255 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI---LKGRSV----- 326 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~---~~~~~i----- 326 (373)
++ +++.+.+.+.+.++||+||||+|+.. ......++..+ |+...++.. ++...+.+...+ ...+.+
T Consensus 210 ~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
T KOG1198|consen 210 KD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLV-GDELANYKLDDLWQSANGIKLYSLGL 283 (347)
T ss_pred CC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEec-cccccccccccchhhhhhhhheeeee
Confidence 99 99999999998449999999999975 77777888885 764444432 211111111100 111111
Q ss_pred EEe---ecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 327 CGT---YFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 327 ~g~---~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
.+. ........+.+..+.+++++|+|++ +.||++++.+|+.++
T Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~ 332 (347)
T KOG1198|consen 284 KGVNYRWLYFVPSAEYLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKL 332 (347)
T ss_pred eccceeeeeecCCHHHHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHH
Confidence 111 0111223688999999999999997 899999999988764
No 106
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.3e-32 Score=263.47 Aligned_cols=294 Identities=21% Similarity=0.202 Sum_probs=228.9
Q ss_pred eeeEEeecCCCC---eEEEEEecCCCC-CCeEEEEEeeeeccccchhcccCCCC---------------CCCCCCCcccc
Q 017335 16 CKAAICRIPGKP---LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTD---------------LPKLPLPVIFG 76 (373)
Q Consensus 16 ~ka~~~~~~~~~---l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~---------------~~~~~~p~~~G 76 (373)
|||+++.+++++ +++++.+.|.|. ++||+|||.++++|++|+..+.|... .. .+|.++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~--~~p~~~G 78 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGI--EFPLTLG 78 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCC--CCCeeec
Confidence 789999888774 889999999994 99999999999999999998876421 12 5688999
Q ss_pred CcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccc
Q 017335 77 HEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISS 156 (373)
Q Consensus 77 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~ 156 (373)
||++|+|+++|++++++++||+|+.... ...+| +
T Consensus 79 ~e~~G~v~~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~g-------------------~ 112 (350)
T cd08248 79 RDCSGVVVDIGSGVKSFEIGDEVWGAVP---------------------------PWSQG-------------------T 112 (350)
T ss_pred ceeEEEEEecCCCcccCCCCCEEEEecC---------------------------CCCCc-------------------c
Confidence 9999999999999999999999986532 11123 8
Q ss_pred eeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCC----CCEEEEECC-ChHHHHHHHHHHHCCCCeEE
Q 017335 157 FTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEV----GSTVAIFGL-GAVGLAVAEGARLNRASKII 231 (373)
Q Consensus 157 ~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~----~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi 231 (373)
|++|+.++.+.++++|+++++++++.+++.+.|||.++.+...+.+ |++|+|+|+ |++|++++++|+.+|+ +|+
T Consensus 113 ~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~ 191 (350)
T cd08248 113 HAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVT 191 (350)
T ss_pred ceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEE
Confidence 9999999999999999999999999999999999998777766654 999999997 9999999999999999 888
Q ss_pred EEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCC
Q 017335 232 GVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS 311 (373)
Q Consensus 232 ~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~ 311 (373)
++.++ ++.+.++++|++++++... .++.+.+... +++|++||++|.. ....++++++++ |+++.+|..+...
T Consensus 192 ~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~ 263 (350)
T cd08248 192 TTCST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKN 263 (350)
T ss_pred EEeCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCcccc
Confidence 88755 6777888999988988776 5565555432 3899999999987 489999999997 9999998543211
Q ss_pred c--cccC--H----HHHhh-CcE-------EEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 312 P--ISLN--S----IEILK-GRS-------VCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 312 ~--~~~~--~----~~~~~-~~~-------i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
. ..+. . ..+.. ... +.... . ....+.+.++++++++|.+.+ +.|+++++++++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~ 337 (350)
T cd08248 264 TDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF-F-SPSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEK 337 (350)
T ss_pred cccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE-E-CCCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHH
Confidence 1 1110 0 01111 111 11110 0 112567999999999998764 67888888777654
No 107
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2.5e-31 Score=251.85 Aligned_cols=300 Identities=23% Similarity=0.299 Sum_probs=243.2
Q ss_pred eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
||++++..++.+ +.+.+++.|.+.+++|+|++.++++|++|+..+.|...... ..|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~ 79 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLP-PLPYVPGSDGAGVVEAVGEGVDGL 79 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCC-CCCeecccceEEEEEeeCCCCCCC
Confidence 688888876543 78888999999999999999999999999988877653221 578899999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|+..... .+ ..+| ++++|+.++.+.++++|+
T Consensus 80 ~~Gd~v~~~~~~------------------------~~-~~~g-------------------~~~~~~~~~~~~~~~ip~ 115 (325)
T cd08253 80 KVGDRVWLTNLG------------------------WG-RRQG-------------------TAAEYVVVPADQLVPLPD 115 (325)
T ss_pred CCCCEEEEeccc------------------------cC-CCCc-------------------ceeeEEEecHHHcEeCCC
Confidence 999999876420 00 0123 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++++++.+++++.+||.++.+...++++++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|+++++
T Consensus 116 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 194 (325)
T cd08253 116 GVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVF 194 (325)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999998877789999999999997 9999999999999999 899999999999999999999998
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEee
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 330 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~ 330 (373)
+... .++.+.+.+.+.+ ++|+++|+.+... ....+++++.+ |+++.+|... ...+++...++. +.++.+..
T Consensus 195 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd08253 195 NYRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVL 267 (325)
T ss_pred eCCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeee
Confidence 8776 6788888877766 8999999999876 88889999997 9999998754 223455555334 78887765
Q ss_pred cCCCCc---hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 331 FGGLKP---RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~---~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
...... .+.+.++.+++.++.+.+ ..|+++++++++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 311 (325)
T cd08253 268 LYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEA 311 (325)
T ss_pred hhhcCHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHH
Confidence 433221 234566677888887653 66777776665543
No 108
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=6.5e-31 Score=248.25 Aligned_cols=293 Identities=24% Similarity=0.280 Sum_probs=238.6
Q ss_pred eeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 17 ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||+.+..++.. +.+.+.+.|.+.+++|+|+|.++++|++|+....+..+. .+|.++|||++|+|+.+|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~---~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLPFVLGVEGAGVVEAVGPGVTGFK 77 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC---CCCccCCcceeEEEEEECCCCCCCC
Confidence 46676655542 667777777789999999999999999999988776543 3577899999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|+... .. |+|++|+.++.+.++++|++
T Consensus 78 ~G~~V~~~~------------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~ 108 (320)
T cd05286 78 VGDRVAYAG------------------------------PP-------------------GAYAEYRVVPASRLVKLPDG 108 (320)
T ss_pred CCCEEEEec------------------------------CC-------------------CceeEEEEecHHHceeCCCC
Confidence 999998542 01 38999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
+++.+++.++....++|.++.+...+.++++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++++++
T Consensus 109 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 187 (320)
T cd05286 109 ISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVIN 187 (320)
T ss_pred CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEe
Confidence 9999999999899999998878888999999999996 9999999999999999 8999999999999999999999998
Q ss_pred CCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH-hhCcEEEEeec
Q 017335 254 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYF 331 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~~ 331 (373)
.+. .++.+.+...+.+ ++|+++||+++.. ...++++++++ |+++.+|..... ...++...+ .+++++.+...
T Consensus 188 ~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 261 (320)
T cd05286 188 YRD---EDFVERVREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSL 261 (320)
T ss_pred CCc---hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEeh
Confidence 776 6788888888776 8999999999864 88999999997 999999874332 223444444 34888776543
Q ss_pred CCCC-c----hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 332 GGLK-P----RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 332 ~~~~-~----~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
.... . .+.+.+++++++++++.+ +.|+++++.+++..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 306 (320)
T cd05286 262 FHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRD 306 (320)
T ss_pred hhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHH
Confidence 3221 1 234567889999988764 66777777776543
No 109
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.7e-31 Score=251.56 Aligned_cols=293 Identities=25% Similarity=0.272 Sum_probs=233.7
Q ss_pred eeeEEeecCC--CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPG--KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~--~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++.+++ ..+++++.|.|++.+++|+||+.++++|++|+..+.+..... .+|.++|||++|+|+.+|++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~~~~~ 78 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW--SYPHVPGVDGAGVVVAVGAKVTGW 78 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCcccccceEEEEEEeCCCCCcC
Confidence 7999999998 349999999999999999999999999999998877654332 346789999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|+.... +..+| +|++|+.++.+.++++|+
T Consensus 79 ~~Gd~V~~~~~---------------------------~~~~~-------------------~~~s~~~~~~~~~~~ip~ 112 (325)
T cd08271 79 KVGDRVAYHAS---------------------------LARGG-------------------SFAEYTVVDARAVLPLPD 112 (325)
T ss_pred CCCCEEEeccC---------------------------CCCCc-------------------cceeEEEeCHHHeEECCC
Confidence 99999986531 11223 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++.+++.+.+.+.+|+.++.+...+++|++|+|+|+ |++|++++++++..|+ +|+++. ++++.+.++++|++.++
T Consensus 113 ~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~ 190 (325)
T cd08271 113 SLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVI 190 (325)
T ss_pred CCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEe
Confidence 99999999999999999998878888999999999998 8899999999999999 788877 67788888889999999
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeec
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF 331 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 331 (373)
+... .++...+.+.+.+ ++|++++++++.. ...++++++++ |+++.+|...... ....+..+..+....+
T Consensus 191 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~ 261 (325)
T cd08271 191 DYND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDAS----PDPPFTRALSVHEVAL 261 (325)
T ss_pred cCCC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCCc----chhHHhhcceEEEEEe
Confidence 8776 6677778887766 8999999999876 67789999997 9999997533221 1111112333332221
Q ss_pred -----CC-----CCchhHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335 332 -----GG-----LKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSA 367 (373)
Q Consensus 332 -----~~-----~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~ 367 (373)
.. ....+.+.+++++++++++.+ +.|+++++.+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~ 310 (325)
T cd08271 262 GAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALR 310 (325)
T ss_pred cccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHH
Confidence 11 011245677889999988754 6677776666544
No 110
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.4e-31 Score=240.19 Aligned_cols=282 Identities=20% Similarity=0.196 Sum_probs=227.7
Q ss_pred eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeC--CCCCccCCCCEEEeeCCC
Q 017335 28 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG--EYVEEVKERDLVLPIFHR 105 (373)
Q Consensus 28 l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~~~~ 105 (373)
++++++++|+|+++|||||+.|.|+++- ++-+....+.. -.|+-+|...+|.++... +....|++||.|+..
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY--~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~--- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSY--APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV--- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCccc--CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec---
Confidence 9999999999999999999999999983 33343333444 466777777666555543 446679999999743
Q ss_pred CCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhh--hcc
Q 017335 106 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA--CLL 183 (373)
Q Consensus 106 ~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~a--a~l 183 (373)
.+|++|..++.+.+.++.++.-+..+ ..+
T Consensus 101 -------------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvL 131 (340)
T COG2130 101 -------------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVL 131 (340)
T ss_pred -------------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhc
Confidence 27999999999999999866322222 235
Q ss_pred chhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCcc
Q 017335 184 SCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKT 261 (373)
Q Consensus 184 ~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~ 261 (373)
..+..|||.++++.++.++|++|+|-++ |++|..+.|+||..|+ +|+++..++||.+++++ +|.|.+||++. ++
T Consensus 132 GmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d 207 (340)
T COG2130 132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---ED 207 (340)
T ss_pred CCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---cc
Confidence 5689999999999999999999999988 9999999999999999 99999999999999988 99999999999 89
Q ss_pred HHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC---C-C-ccccCHHHHhh-CcEEEEeec-CCC
Q 017335 262 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH---G-S-PISLNSIEILK-GRSVCGTYF-GGL 334 (373)
Q Consensus 262 ~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~---~-~-~~~~~~~~~~~-~~~i~g~~~-~~~ 334 (373)
+.+++.+.++.++|+.||++|++. ++..+..|+.. +|+..+|.-.. . . .-+-....++. .++++|+.. ..+
T Consensus 208 ~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~ 285 (340)
T COG2130 208 FAQALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDY 285 (340)
T ss_pred HHHHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhh
Confidence 999999999999999999999988 99999999997 99999996322 1 1 11223334444 889999987 333
Q ss_pred Cc--hhHHHHHHHHHHcCCCCCCccc---ccCCCccccccc
Q 017335 335 KP--RSDIATLAQKYLDKVHLRSSFH---LCDPNSDSAGLL 370 (373)
Q Consensus 335 ~~--~~~~~~~~~~~~~g~i~~~~~~---~~~~~~a~~~~l 370 (373)
.. .+..+++..|+++|||+.+.-. +|.+++||-.+|
T Consensus 286 ~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl 326 (340)
T COG2130 286 DQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLL 326 (340)
T ss_pred hhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHh
Confidence 22 2668899999999999985433 777787777665
No 111
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.4e-31 Score=249.22 Aligned_cols=294 Identities=22% Similarity=0.281 Sum_probs=239.0
Q ss_pred eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++..++.+ +++++.+.|.+.+++|+|++.++++|++|+....+...... ..|.++|||++|+|+++|+++..+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~ 79 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARP-PLPAILGCDVAGVVEAVGEGVTRF 79 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccccceeEEEEEeCCCCCCC
Confidence 799999987764 77888888889999999999999999999998877643221 457789999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCC-CCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~-~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
++||+|+.... |+. .. |+|++|+.++.+.++++|
T Consensus 80 ~~Gd~V~~~~~--------------------------~~~~~~-------------------g~~~~~~~v~~~~~~~~p 114 (326)
T cd08272 80 RVGDEVYGCAG--------------------------GLGGLQ-------------------GSLAEYAVVDARLLALKP 114 (326)
T ss_pred CCCCEEEEccC--------------------------CcCCCC-------------------CceeEEEEecHHHcccCC
Confidence 99999986431 110 12 389999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
+++++..++.++..+.+||.++.+...++++++++|+|+ |.+|++++++++.+|+ +|++++++ ++.+.++++|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~ 192 (326)
T cd08272 115 ANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPI 192 (326)
T ss_pred CCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEE
Confidence 999999999999999999998888899999999999996 9999999999999999 89999888 88999999999888
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEee
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (373)
++... . +.+.+.+.+.+ ++|+++|++++.. ....+++++++ |+++.+|... ..++... ..+++++.+..
T Consensus 193 ~~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~ 262 (326)
T cd08272 193 IYYRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVF 262 (326)
T ss_pred Eecch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEE
Confidence 88776 5 77788888777 8999999999865 88899999997 9999998643 2222222 13377777765
Q ss_pred cCC--C---C---chhHHHHHHHHHHcCCCCC----CcccccCCCcccc
Q 017335 331 FGG--L---K---PRSDIATLAQKYLDKVHLR----SSFHLCDPNSDSA 367 (373)
Q Consensus 331 ~~~--~---~---~~~~~~~~~~~~~~g~i~~----~~~~~~~~~~a~~ 367 (373)
... . . ..+.+.++++++.++++.. +.|++.++.+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 311 (326)
T cd08272 263 TLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHA 311 (326)
T ss_pred cccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHH
Confidence 332 1 1 1356888999999988753 5667776666654
No 112
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.6e-30 Score=246.91 Aligned_cols=300 Identities=25% Similarity=0.306 Sum_probs=240.3
Q ss_pred eeeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+++...+. .+++.+.+.|.+++++++|+|.++++|+.|+....+...... .+|.++|||++|+|+.+|+.+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~ 79 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPP-PLPARLGYEAAGVVEAVGAGVTGF 79 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCC-CCCCCCCcceEEEEEeeCCCCCcC
Confidence 68888887554 277778888889999999999999999999988877643321 457889999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|+..+. .+...+| ++++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~~-------------------------~~~~~~g-------------------~~~~~~~~~~~~~~~~p~ 115 (328)
T cd08268 80 AVGDRVSVIPA-------------------------ADLGQYG-------------------TYAEYALVPAAAVVKLPD 115 (328)
T ss_pred CCCCEEEeccc-------------------------cccCCCc-------------------cceEEEEechHhcEeCCC
Confidence 99999987542 1112233 899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++++++.+++++.++|.++.+...+.++++|+|+|+ |++|++++++++..|+ +|+.+++++++.+.++++|+++++
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 194 (328)
T cd08268 116 GLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVI 194 (328)
T ss_pred CCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEE
Confidence 99999999999999999998878888999999999998 9999999999999999 899999999999999889998888
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH-HHhhCcEEEEee
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTY 330 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~-~~~~~~~i~g~~ 330 (373)
+.+. .++.+.+.+.+.+ ++|+++++.++.. ...++++++++ |+++.+|.... ....++.. .+.++.++.+..
T Consensus 195 ~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (328)
T cd08268 195 VTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYS 268 (328)
T ss_pred ecCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEe
Confidence 8776 6777778777766 8999999999855 88999999997 99999987443 22334444 234488888876
Q ss_pred cCCCC-ch----hHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335 331 FGGLK-PR----SDIATLAQKYLDKVHLR---SSFHLCDPNSDSA 367 (373)
Q Consensus 331 ~~~~~-~~----~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~ 367 (373)
..... .. ..+..+.+++.++.+.+ ..|+++++.++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (328)
T cd08268 269 LDEITLDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHR 313 (328)
T ss_pred cccccCCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHH
Confidence 44321 11 23455566677777654 6677777666654
No 113
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=9.7e-31 Score=249.93 Aligned_cols=292 Identities=21% Similarity=0.211 Sum_probs=229.1
Q ss_pred eeEEeecCC------CCeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCC
Q 017335 17 KAAICRIPG------KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEY 89 (373)
Q Consensus 17 ka~~~~~~~------~~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~ 89 (373)
||+++...+ +.+++++++.|++.+++|+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 566665432 12889999999999999999999999999876555443211 10023568899999999999964
Q ss_pred CCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeec-cce
Q 017335 90 VEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THV 168 (373)
Q Consensus 90 v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~ 168 (373)
++++||+|+.. ++|++|+.++. +.+
T Consensus 83 --~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 83 --DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred --CCCCCCEEecc----------------------------------------------------cceEEEEEecchhhc
Confidence 79999999742 17999999999 999
Q ss_pred EEcCCCCC--hhhhhc-cchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335 169 VKITPHIP--LGIACL-LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (373)
Q Consensus 169 ~~lP~~l~--~~~aa~-l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~ 244 (373)
+++|++++ +.+++. +++++.|||.++.+...+.++++|||+|+ |++|++++++|+..|+ +|+++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999985 555555 88899999998877788999999999996 9999999999999999 8999999999999998
Q ss_pred H-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCcc----ccCHHH
Q 017335 245 K-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI----SLNSIE 319 (373)
Q Consensus 245 ~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~----~~~~~~ 319 (373)
+ +|++++++.++ .++.+.+.+.+++++|++|||+|+.. +..++++++++ |+++.+|........ .++...
T Consensus 188 ~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 262 (329)
T cd05288 188 EELGFDAAINYKT---PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN 262 (329)
T ss_pred hhcCCceEEecCC---hhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence 8 99999998876 67877887777558999999999755 99999999997 999999864332111 122333
Q ss_pred Hhh-CcEEEEeecCCCCc--hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 320 ILK-GRSVCGTYFGGLKP--RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 320 ~~~-~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
++. +.++.+..+..... .+.+.++++++.+|.+.+ ..++++++.+++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~~a~~~ 317 (329)
T cd05288 263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLENAPEAFLG 317 (329)
T ss_pred HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHHHHHHHHH
Confidence 334 88888876544321 255788999999998875 55677777666543
No 114
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=1.6e-30 Score=248.46 Aligned_cols=292 Identities=23% Similarity=0.274 Sum_probs=230.3
Q ss_pred eeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 17 KAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 17 ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||+++...+.+ +++.+.+.|.|.+++|+|++.++++|++|+..+.+..+... .+|.++|||++|+|+.+|++++.|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQP-PLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccccceEEEEEEeCCCCccCC
Confidence 78888876653 88888999999999999999999999999998887654322 5788999999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|..... + |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------~-------------------g~~~~~~~~~~~~~~~~p~~ 111 (331)
T cd08273 81 VGDRVAALTR------------------------------V-------------------GGNAEYINLDAKYLVPVPEG 111 (331)
T ss_pred CCCEEEEeCC------------------------------C-------------------cceeeEEEechHHeEECCCC
Confidence 9999986421 1 28999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEc
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 253 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~ 253 (373)
+++++++.++.++.+||.++.+...++++++|+|+|+ |++|++++++|+.+|+ +|+++++ +++.+.++++|+.. ++
T Consensus 112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~ 188 (331)
T cd08273 112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-ID 188 (331)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-Ec
Confidence 9999999999999999998777788999999999998 9999999999999999 8999987 88889999999754 44
Q ss_pred CCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccC--HH----------HHh
Q 017335 254 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN--SI----------EIL 321 (373)
Q Consensus 254 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~--~~----------~~~ 321 (373)
... .++... ...++++|+++||+++.. ...++++++++ |+++.+|.........++ .. ...
T Consensus 189 ~~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (331)
T cd08273 189 YRT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLL 261 (331)
T ss_pred CCC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcce
Confidence 443 444443 344458999999999887 89999999997 999999975432221111 11 011
Q ss_pred -hCcEEEEeecCCCC------chhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 322 -KGRSVCGTYFGGLK------PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 322 -~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
....+.+....... ..+.+.++++++++|.+.+ +.|+++++.+++..
T Consensus 262 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~ 318 (331)
T cd08273 262 PTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRL 318 (331)
T ss_pred eccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHH
Confidence 12233332211111 1367888999999998864 67888888777654
No 115
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.98 E-value=2.6e-30 Score=245.20 Aligned_cols=295 Identities=23% Similarity=0.255 Sum_probs=240.9
Q ss_pred eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCcc
Q 017335 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEV 93 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 93 (373)
|||+.+..++.+ +.+.+.+.|.+++++++|+|.++++|++|+..+.+....+. .+|.++|||++|+|+.+|+.+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vg~~~~~~ 79 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPP-GASDILGLEVAGEVVAVGEGVSRW 79 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCC-CCCCCccceeEEEEEEeCCCCCCC
Confidence 688888876554 66777777778999999999999999999988876543321 467899999999999999999999
Q ss_pred CCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCC
Q 017335 94 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 173 (373)
Q Consensus 94 ~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~ 173 (373)
++||+|+... .+ |+|++|+.++.+.++++|+
T Consensus 80 ~~Gd~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip~ 110 (325)
T TIGR02824 80 KVGDRVCALV------------------------------AG-------------------GGYAEYVAVPAGQVLPVPE 110 (325)
T ss_pred CCCCEEEEcc------------------------------CC-------------------CcceeEEEecHHHcEeCCC
Confidence 9999997531 11 2899999999999999999
Q ss_pred CCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 174 HIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 174 ~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
++++.+++.++.++.++|.++.+...++++++|+|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (325)
T TIGR02824 111 GLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAI 189 (325)
T ss_pred CCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998888889999999999997 9999999999999999 899999999999989889988888
Q ss_pred cCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH-hhCcEEEEee
Q 017335 253 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTY 330 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~ 330 (373)
+... .++.+.+....++ ++|+++|+.|... +..++++++++ |+++.+|....... .++...+ .+++++.+..
T Consensus 190 ~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (325)
T TIGR02824 190 NYRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGST 263 (325)
T ss_pred ecCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEe
Confidence 7766 6777888877766 8999999999765 88999999997 99999987432222 5566555 3499999887
Q ss_pred cCCC-Cc------hhHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335 331 FGGL-KP------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSA 367 (373)
Q Consensus 331 ~~~~-~~------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~ 367 (373)
.... .. ...+.+++++++++++.+ ..|+++++.+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 310 (325)
T TIGR02824 264 LRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHA 310 (325)
T ss_pred hhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHH
Confidence 5442 11 123566788998988753 6677776666554
No 116
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.98 E-value=5.1e-30 Score=247.77 Aligned_cols=301 Identities=20% Similarity=0.191 Sum_probs=223.9
Q ss_pred eeeEEeecCCCCeEEEEEecCCC---CCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCC-
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPP---KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE- 91 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~---~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~- 91 (373)
.|++++.+++.++++++++.|.| .+++|+||+.++++|++|+..+.+...... ..|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~V~~vG~~v~~ 79 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFK-VKEKGLGRDYSGVIVKVGSNVAS 79 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccc-cCCCccCceeEEEEEEeCccccc
Confidence 37899999888788887777766 899999999999999999987754322110 2477899999999999999998
Q ss_pred ccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc----c
Q 017335 92 EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT----H 167 (373)
Q Consensus 92 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~ 167 (373)
+|++||+|+......| ..+ |+|++|+.++.. .
T Consensus 80 ~~~~Gd~V~~~~~~~~-------------------------~~~-------------------g~~~~~~~v~~~~~~~~ 115 (352)
T cd08247 80 EWKVGDEVCGIYPHPY-------------------------GGQ-------------------GTLSQYLLVDPKKDKKS 115 (352)
T ss_pred CCCCCCEEEEeecCCC-------------------------CCC-------------------ceeeEEEEEccccccce
Confidence 8999999986532100 012 389999999987 7
Q ss_pred eEEcCCCCChhhhhccchhhhhHHHHHHHHh-CCCCCCEEEEECC-ChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH
Q 017335 168 VVKITPHIPLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK 244 (373)
Q Consensus 168 ~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~-~~~~~~~VlI~G~-G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~ 244 (373)
++++|+++++++++.++..+.|||.++.+.. .+++|++|+|+|+ |++|++++++|+.+| .+.|+++.+ +++.+.++
T Consensus 116 ~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~ 194 (352)
T cd08247 116 ITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNK 194 (352)
T ss_pred eEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHH
Confidence 9999999999999999999999999876666 7999999999998 799999999999875 435777764 55566788
Q ss_pred HcCCceEEcCCCCCCcc---HHHHHHHh-cCC-CccEEEECCCCHHHHHHHHHHhc---cCCceEEEEcccCCCC--ccc
Q 017335 245 KFGITDFINPATCGDKT---VSQVIKEM-TDG-GADYCFECIGLTSVMNDAFNSSR---EGWGKTVILGVEMHGS--PIS 314 (373)
Q Consensus 245 ~lga~~vi~~~~~~~~~---~~~~i~~~-~~~-~~d~vid~~g~~~~~~~~~~~l~---~~~G~~v~~G~~~~~~--~~~ 314 (373)
++|++++++.++ .+ +...+.+. +++ ++|++|||+|+......++++++ ++ |+++.++...... ..+
T Consensus 195 ~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~ 270 (352)
T cd08247 195 KLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDT 270 (352)
T ss_pred HhCCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchh
Confidence 899999998766 34 44444444 424 89999999998666889999999 97 9999875322110 000
Q ss_pred --------cCHHHHhhC-----cEEEEeecCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 315 --------LNSIEILKG-----RSVCGTYFGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 315 --------~~~~~~~~~-----~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
+....+..+ .++.... .....+.+.++++++.++.+.+ +.++++++++++..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~ 338 (352)
T cd08247 271 FNSWDNPSANARKLFGSLGLWSYNYQFFL--LDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFER 338 (352)
T ss_pred hhhccccchhhhhhhhhhcCCCcceEEEE--ecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHH
Confidence 111111112 2222211 1111356888999999998764 77888888877654
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=4.1e-30 Score=241.61 Aligned_cols=279 Identities=23% Similarity=0.265 Sum_probs=225.3
Q ss_pred cCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCcccc
Q 017335 35 VEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCK 114 (373)
Q Consensus 35 ~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~ 114 (373)
+|.+.+++|+|++.++++|+.|+..+.+..+... .+|.++|||++|+|+++|++++++++||+|+....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMP-PYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG---------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCC-CCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC----------
Confidence 5788999999999999999999998887654321 57889999999999999999999999999986531
Q ss_pred CCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHH
Q 017335 115 SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 194 (373)
Q Consensus 115 ~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~ 194 (373)
..+| +|++|+.++++.++++|+++++++++.++..+.+||.++
T Consensus 71 ------------------~~~g-------------------~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 113 (303)
T cd08251 71 ------------------ESMG-------------------GHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF 113 (303)
T ss_pred ------------------CCCc-------------------ceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH
Confidence 0123 899999999999999999999999999999999999975
Q ss_pred HHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-
Q 017335 195 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG- 272 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~- 272 (373)
+...++++++|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++++++... .++...+...+++
T Consensus 114 -~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~ 188 (303)
T cd08251 114 -ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGR 188 (303)
T ss_pred -HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCC
Confidence 6788999999999976 9999999999999999 8999999999999999999999998876 6788888888877
Q ss_pred CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCC---C---chhHHHHHHHH
Q 017335 273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL---K---PRSDIATLAQK 346 (373)
Q Consensus 273 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~---~~~~~~~~~~~ 346 (373)
++|+++|++++.. ....+++++++ |+++.+|.........++...+..+.++....+... . ..+.+.+++++
T Consensus 189 ~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
T cd08251 189 GVDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSL 266 (303)
T ss_pred CceEEEECCcHHH-HHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHH
Confidence 8999999998654 88999999997 999999864322222344444444554443322111 1 12457888899
Q ss_pred HHcCCCCC---CcccccCCCccccc
Q 017335 347 YLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 347 ~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
+.+|.+++ +.|+++++.+++..
T Consensus 267 ~~~g~~~~~~~~~~~~~~~~~~~~~ 291 (303)
T cd08251 267 VEEGELRPTVSRIFPFDDIGEAYRY 291 (303)
T ss_pred HHCCCccCCCceEEcHHHHHHHHHH
Confidence 99998764 66777777666543
No 118
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.97 E-value=6.4e-30 Score=240.77 Aligned_cols=289 Identities=21% Similarity=0.266 Sum_probs=231.1
Q ss_pred eeeEEeecCCCC--eEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCC-CCCCCCccccCcccEEEEEeCCCCCc
Q 017335 16 CKAAICRIPGKP--LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
|||+++..++.. +.+++.+.|++++++|+||+.++++|++|+..+.+.... ....+|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 789998877653 566777778899999999999999999999988775421 11145789999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
+++||+|+..... ..+ |+|++|+.++.+.++++|
T Consensus 81 ~~~G~~V~~~~~~---------------------------~~~-------------------g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF---------------------------TRG-------------------GAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC---------------------------CCC-------------------CcceeEEEecHHHhccCC
Confidence 9999999865410 112 389999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
+++++..++.+++.+.+++.++.+...+.++++|+|+|+ |.+|++++++++..|+ +|+++.+++ +.+.++++|++++
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999999999998777667999999999997 9999999999999999 888888777 8888888998888
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEee
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTY 330 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~ 330 (373)
++... .++.+ .+.+ ++|+++|++++.. ...++++++++ |+++.+|..... .. ..+..+.++....
T Consensus 193 ~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~--~~---~~~~~~~~~~~~~ 258 (309)
T cd05289 193 IDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPPA--EQ---AAKRRGVRAGFVF 258 (309)
T ss_pred EeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCcc--hh---hhhhccceEEEEE
Confidence 87765 44433 3333 7999999999875 89999999997 999999874331 11 2222366666554
Q ss_pred cCCCCchhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 331 FGGLKPRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
+... .+.+.+++++++++.+.+ +.|+++++.++++.
T Consensus 259 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 297 (309)
T cd05289 259 VEPD--GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHER 297 (309)
T ss_pred eccc--HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHH
Confidence 3222 578999999999998753 67888888777654
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=2.6e-29 Score=237.85 Aligned_cols=294 Identities=27% Similarity=0.407 Sum_probs=237.3
Q ss_pred eeeEEeecCCCC--eEEEEEecCCCC-CCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCc
Q 017335 16 CKAAICRIPGKP--LVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE 92 (373)
Q Consensus 16 ~ka~~~~~~~~~--l~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 92 (373)
|||+++..++.. +++.+.+ |.+. +++++|++.++++|++|+..+.+...... ..|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~ 78 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKP-PLPFVPGSEVAGVVEAVGEGVTG 78 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCC-CCCCcccceeEEEEEEeCCCCCC
Confidence 689998854432 6777777 6666 59999999999999999988877653221 35678999999999999999999
Q ss_pred cCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcC
Q 017335 93 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 172 (373)
Q Consensus 93 ~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 172 (373)
+++||+|+... .+ |++++|+.++.+.++++|
T Consensus 79 ~~~G~~V~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~~ip 109 (323)
T cd08241 79 FKVGDRVVALT------------------------------GQ-------------------GGFAEEVVVPAAAVFPLP 109 (323)
T ss_pred CCCCCEEEEec------------------------------CC-------------------ceeEEEEEcCHHHceeCC
Confidence 99999998653 01 389999999999999999
Q ss_pred CCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE
Q 017335 173 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 251 (373)
Q Consensus 173 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v 251 (373)
+++++.+++.+.....+|+.++.+...++++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+
T Consensus 110 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 188 (323)
T cd08241 110 DGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHV 188 (323)
T ss_pred CCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCcee
Confidence 999999999888899999998777888999999999998 9999999999999999 89999999999999999999888
Q ss_pred EcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHh-hCcEEEEe
Q 017335 252 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGT 329 (373)
Q Consensus 252 i~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~-~~~~i~g~ 329 (373)
++... .++.+.+...+++ ++|+++|++|+.. ...++++++++ |+++.+|..... ...++....+ ++.++.+.
T Consensus 189 ~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 262 (323)
T cd08241 189 IDYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGE-IPQIPANLLLLKNISVVGV 262 (323)
T ss_pred eecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCC-cCcCCHHHHhhcCcEEEEE
Confidence 88776 6788888888776 8999999999854 88899999997 999999874322 1113332233 48888887
Q ss_pred ecCCCCc------hhHHHHHHHHHHcCCCCC---CcccccCCCcccc
Q 017335 330 YFGGLKP------RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSA 367 (373)
Q Consensus 330 ~~~~~~~------~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~ 367 (373)
....+.. .+.+.+++++++++++.+ ..|++.++.+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (323)
T cd08241 263 YWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALR 309 (323)
T ss_pred ecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHH
Confidence 6554321 255788999999998754 5566666666554
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.4e-28 Score=235.02 Aligned_cols=295 Identities=21% Similarity=0.303 Sum_probs=232.3
Q ss_pred eeEEeecCCC--CeEEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccC
Q 017335 17 KAAICRIPGK--PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVK 94 (373)
Q Consensus 17 ka~~~~~~~~--~l~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 94 (373)
||+++...+. .+.+.+.+.|.|.+++|+||+.++++|++|+..+.+...... ..|.++|||++|+|+.+|+++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~ 79 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAP-KPPFVPGFECAGTVEAVGEGVKDFK 79 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCC-CCCCCCcceeEEEEEEECCCCcCCC
Confidence 4666665443 277778888889999999999999999999998877643221 4577899999999999999999999
Q ss_pred CCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCC
Q 017335 95 ERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPH 174 (373)
Q Consensus 95 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~ 174 (373)
+||+|+.... +| +|++|+.++.+.++++|++
T Consensus 80 ~G~~V~~~~~------------------------------~~-------------------~~~~~~~~~~~~~~~ip~~ 110 (337)
T cd08275 80 VGDRVMGLTR------------------------------FG-------------------GYAEVVNVPADQVFPLPDG 110 (337)
T ss_pred CCCEEEEecC------------------------------CC-------------------eeeeEEEecHHHeEECCCC
Confidence 9999986421 12 8999999999999999999
Q ss_pred CChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceEE
Q 017335 175 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFI 252 (373)
Q Consensus 175 l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~~vi 252 (373)
+++++++.+++.+.++|.++.+...++++++|+|+|+ |++|++++++|+.+ +. .++... .+++.+.++++|+++++
T Consensus 111 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~~-~~~~~~~~~~~g~~~~~ 188 (337)
T cd08275 111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGTA-SASKHEALKENGVTHVI 188 (337)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEeC-CHHHHHHHHHcCCcEEe
Confidence 9999999999999999998888888999999999998 99999999999999 43 333332 45678888889998899
Q ss_pred cCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCc---------------cccCH
Q 017335 253 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP---------------ISLNS 317 (373)
Q Consensus 253 ~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~---------------~~~~~ 317 (373)
+.+. .++...+...+++++|+++|++|+.. ...++++++++ |+++.+|....... +.+..
T Consensus 189 ~~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
T cd08275 189 DYRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDP 263 (337)
T ss_pred eCCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCH
Confidence 8876 67878888777558999999999865 88999999997 99999987532211 12222
Q ss_pred HHHhh-CcEEEEeecCCCCc-----hhHHHHHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 318 IEILK-GRSVCGTYFGGLKP-----RSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 318 ~~~~~-~~~i~g~~~~~~~~-----~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
...+. +.++.+..+..... ...+.++++++.++++.+ ..|+++++++++..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (337)
T cd08275 264 MKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSVFPFEEVGEAMRR 323 (337)
T ss_pred HHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeEEcHHHHHHHHHH
Confidence 33344 88888876542211 134678889999998764 66777777776553
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=6.7e-29 Score=235.43 Aligned_cols=283 Identities=22% Similarity=0.225 Sum_probs=217.8
Q ss_pred EEEEEecCCCCCCeEEEEEeeeeccccchhcccCCCCCC-CCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCC
Q 017335 29 VIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 107 (373)
Q Consensus 29 ~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c 107 (373)
++++.+.|++.++||+|++.++++|++|...+.|..+.. ...+|..+|||++|+|+++|++++++++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 778889999999999999999999999999887754210 01356789999999999999999999999999865420
Q ss_pred CCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhh
Q 017335 108 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 187 (373)
Q Consensus 108 ~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~ 187 (373)
... |+|++|+.++.+.++++|+++++++++.+++++
T Consensus 93 -------------------------~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 -------------------------KGG-------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred -------------------------CCC-------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 111 389999999999999999999999999999999
Q ss_pred hhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHH
Q 017335 188 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 266 (373)
Q Consensus 188 ~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i 266 (373)
.+||.++.+...++++++|+|+|+ |++|++++++|+.+|+ +|++++++ ++.+.++++|++++++.+. .++.
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~--- 200 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV--- 200 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence 999998777777999999999998 9999999999999999 89998865 8888889999988888765 3443
Q ss_pred HHhcCC-CccEEEECCCCH-HHHHHHHHHhccCCceEEEEcccCCCCcccc---CHHHHhhCcEEEEeecCCCCchhHHH
Q 017335 267 KEMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVEMHGSPISL---NSIEILKGRSVCGTYFGGLKPRSDIA 341 (373)
Q Consensus 267 ~~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~ 341 (373)
...+.+ ++|+++||+++. ......+..++++ |+++.+|.......... .........++....... ..+.+.
T Consensus 201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 277 (319)
T cd08267 201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLE 277 (319)
T ss_pred hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHH
Confidence 334444 899999999953 2234444459997 99999997543322221 111222233333322221 267899
Q ss_pred HHHHHHHcCCCCC---CcccccCCCccccc
Q 017335 342 TLAQKYLDKVHLR---SSFHLCDPNSDSAG 368 (373)
Q Consensus 342 ~~~~~~~~g~i~~---~~~~~~~~~~a~~~ 368 (373)
+++++++++++.+ +.|+++++.+++..
T Consensus 278 ~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~ 307 (319)
T cd08267 278 QLAELVEEGKLKPVIDSVYPLEDAPEAYRR 307 (319)
T ss_pred HHHHHHHCCCeeeeeeeEEcHHHHHHHHHH
Confidence 9999999998764 66788877777654
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=8.8e-29 Score=230.30 Aligned_cols=267 Identities=21% Similarity=0.193 Sum_probs=218.0
Q ss_pred CeEEEEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCc
Q 017335 41 WEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 120 (373)
Q Consensus 41 ~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~ 120 (373)
+||+||+.++++|++|+....+.. . .+|.++|||++|+|+++|++++++++||+|+....
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~---------------- 60 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--P--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP---------------- 60 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--C--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec----------------
Confidence 589999999999999999887754 2 46789999999999999999999999999986421
Q ss_pred CccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCC
Q 017335 121 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 200 (373)
Q Consensus 121 c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~ 200 (373)
|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+
T Consensus 61 ----------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 106 (293)
T cd05195 61 ----------------------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL 106 (293)
T ss_pred ----------------------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc
Confidence 3899999999999999999999999999999999999988788899
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC--CceEEcCCCCCCccHHHHHHHhcCC-CccE
Q 017335 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIKEMTDG-GADY 276 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg--a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~ 276 (373)
++|++|+|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++| ++++++... .++.+.+.+.+.+ ++|+
T Consensus 107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~ 182 (293)
T cd05195 107 QKGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDV 182 (293)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceE
Confidence 99999999986 9999999999999999 8999999999999999888 788888766 6788888888776 8999
Q ss_pred EEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCCC------chhHHHHHHHHHHcC
Q 017335 277 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK------PRSDIATLAQKYLDK 350 (373)
Q Consensus 277 vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~~~~g 350 (373)
++|++|+. .++.++++++++ |+++.+|.........++...+..+.++.+..+.... ..+.+.+++++++++
T Consensus 183 vi~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (293)
T cd05195 183 VLNSLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAG 260 (293)
T ss_pred EEeCCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCC
Confidence 99999988 499999999997 9999998744322122333333336666655432211 124578889999999
Q ss_pred CCCC---CcccccCCCcccc
Q 017335 351 VHLR---SSFHLCDPNSDSA 367 (373)
Q Consensus 351 ~i~~---~~~~~~~~~~a~~ 367 (373)
++.+ ..+.++++.+++.
T Consensus 261 ~~~~~~~~~~~~~~~~~a~~ 280 (293)
T cd05195 261 VLKPLPPTVVPSASEIDAFR 280 (293)
T ss_pred CcccCCCeeechhhHHHHHH
Confidence 8764 4566666655544
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=3.2e-28 Score=226.46 Aligned_cols=263 Identities=21% Similarity=0.241 Sum_probs=214.3
Q ss_pred EEEeeeeccccchhcccCCCCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccC
Q 017335 45 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 124 (373)
Q Consensus 45 Vkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~ 124 (373)
||+.++++|++|+..+.+..+ .|.++|||++|+|+++|++++++++||+|+....
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------- 56 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-------------------- 56 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC--------------------
Confidence 899999999999998877532 3568999999999999999999999999986421
Q ss_pred CCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCC
Q 017335 125 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 204 (373)
Q Consensus 125 ~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~ 204 (373)
|+|++|+.++.+.++++|+++++++++.+++.+.++|.++.+...+++++
T Consensus 57 ------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~ 106 (288)
T smart00829 57 ------------------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGE 106 (288)
T ss_pred ------------------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCC
Confidence 38999999999999999999999999999999999999877888999999
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--ceEEcCCCCCCccHHHHHHHhcCC-CccEEEEC
Q 017335 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 280 (373)
Q Consensus 205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~ 280 (373)
+|+|+|+ |++|++++++++.+|+ +|+++++++++.+.++++|+ +++++... .++.+.+.+.+++ ++|+++|+
T Consensus 107 ~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~ 182 (288)
T smart00829 107 SVLIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNS 182 (288)
T ss_pred EEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeC
Confidence 9999986 9999999999999999 89999999999999999998 78888776 6787888887776 89999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCCC--C---chhHHHHHHHHHHcCCCCC-
Q 017335 281 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL--K---PRSDIATLAQKYLDKVHLR- 354 (373)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~--~---~~~~~~~~~~~~~~g~i~~- 354 (373)
+++. .+..++++++++ |+++.+|.........++...+.++.++.+..+... . ..+.+.+++++++++++.+
T Consensus 183 ~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (288)
T smart00829 183 LAGE-FLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL 260 (288)
T ss_pred CCHH-HHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc
Confidence 9964 488999999997 999999864322222344444334677666543211 1 1245777889999998764
Q ss_pred --CcccccCCCccccc
Q 017335 355 --SSFHLCDPNSDSAG 368 (373)
Q Consensus 355 --~~~~~~~~~~a~~~ 368 (373)
+.|+++++.+++..
T Consensus 261 ~~~~~~~~~~~~~~~~ 276 (288)
T smart00829 261 PVTVFPISDVEDAFRY 276 (288)
T ss_pred CceEEcHHHHHHHHHH
Confidence 66777776665543
No 124
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.94 E-value=2e-25 Score=208.26 Aligned_cols=232 Identities=25% Similarity=0.293 Sum_probs=186.5
Q ss_pred CCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceec
Q 017335 70 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH 149 (373)
Q Consensus 70 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~ 149 (373)
.+|.++|||++|+|+++|++++++++||+|+...
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------------------------- 52 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG---------------------------------------------- 52 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----------------------------------------------
Confidence 4889999999999999999999999999998531
Q ss_pred ccccccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCe
Q 017335 150 HFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 229 (373)
Q Consensus 150 ~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~ 229 (373)
.|++|+.++.+.++++|+++++++++.+ ..+.+||.++ ....++++++|||+|+|++|++++++|+.+|+++
T Consensus 53 ------~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 53 ------PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred ------CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 5899999999999999999999999988 7899999975 5788999999999988999999999999999933
Q ss_pred EEEEcCChhHHHHHHHcC-CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335 230 IIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 230 Vi~~~~~~~~~~~~~~lg-a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
|+++++++++.+.++++| ++++++... ..+.+ ++|++||+++....+...+++++++ |+++.+|..
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~ 192 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWY 192 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEecc
Confidence 999999999999999999 565554332 11234 8999999999777789999999997 999999975
Q ss_pred CCCCccccCHHHHhh-CcEEEEeecCCCC---------chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 308 MHGSPISLNSIEILK-GRSVCGTYFGGLK---------PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 308 ~~~~~~~~~~~~~~~-~~~i~g~~~~~~~---------~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
... . ......+.. ..++.+....... ..+.+.+++++++++++.. +.|+++++.++++.+
T Consensus 193 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~ 265 (277)
T cd08255 193 GLK-P-LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLL 265 (277)
T ss_pred CCC-c-cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHH
Confidence 432 1 112223333 5577776543211 1256899999999998754 678888888776543
No 125
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.92 E-value=1.1e-22 Score=183.59 Aligned_cols=274 Identities=23% Similarity=0.214 Sum_probs=203.1
Q ss_pred CCCCCCeEEEEEeeeeccccchhcccCCCCCCCCCCCccccC----cccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCc
Q 017335 36 EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGH----EAVGVVESVGEYVEEVKERDLVLPIFHRDCGECR 111 (373)
Q Consensus 36 p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~----e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~ 111 (373)
.++++++||||..|-+..+--...+....+..- -.|+.+|- .++|+|++.+ .++|++||.|....
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y-~~~~~~G~pi~g~GV~kVi~S~--~~~~~~GD~v~g~~-------- 101 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDY-APPYEPGKPIDGFGVAKVIDSG--HPNYKKGDLVWGIV-------- 101 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccc-cCcccCCcEecCCceEEEEecC--CCCCCcCceEEEec--------
Confidence 347889999999999998764433332222210 12333332 7899999964 46799999996432
Q ss_pred cccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeecc--ceEEcCC--CCChhhhh-ccchh
Q 017335 112 DCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITP--HIPLGIAC-LLSCG 186 (373)
Q Consensus 112 ~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~lP~--~l~~~~aa-~l~~~ 186 (373)
+|.||.+++.. ...++|. +.++.... ++..+
T Consensus 102 --------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~ 137 (343)
T KOG1196|consen 102 --------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMP 137 (343)
T ss_pred --------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhhccCCc
Confidence 69999999764 3344443 34433333 35568
Q ss_pred hhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHH
Q 017335 187 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQ 264 (373)
Q Consensus 187 ~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~ 264 (373)
.+|||....+....+.|++|+|-|+ |++|+++.|+||.+|+ +|++...++||-.++++ +|.+..+|+++ +.+..+
T Consensus 138 glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~--e~~~~~ 214 (343)
T KOG1196|consen 138 GLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE--ESDLSA 214 (343)
T ss_pred hhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--ccCHHH
Confidence 8999999999999999999999998 9999999999999999 99999999999999875 79999999998 248888
Q ss_pred HHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccc----cC-HHHHh-hCcEEEEeecCCCCc--
Q 017335 265 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS----LN-SIEIL-KGRSVCGTYFGGLKP-- 336 (373)
Q Consensus 265 ~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~----~~-~~~~~-~~~~i~g~~~~~~~~-- 336 (373)
++.+..+.++|+.||.+|+.. ++..+..|+.. ||++.+|.-+ ....+ +. ....+ ++++++|....++.+
T Consensus 215 aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~IS-qYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~ 291 (343)
T KOG1196|consen 215 ALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMIS-QYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKY 291 (343)
T ss_pred HHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeeh-hccccCCccccchhhheeeeEEeeeEEeechhhhh
Confidence 898888889999999999988 99999999996 9999999743 11111 11 12223 378888876555432
Q ss_pred hhHHHHHHHHHHcCCCCCCccc---ccCCCccccccc
Q 017335 337 RSDIATLAQKYLDKVHLRSSFH---LCDPNSDSAGLL 370 (373)
Q Consensus 337 ~~~~~~~~~~~~~g~i~~~~~~---~~~~~~a~~~~l 370 (373)
.+-++.+..++++|||...+-. ++..++|+-.++
T Consensus 292 ~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf 328 (343)
T KOG1196|consen 292 PKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLF 328 (343)
T ss_pred HHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHh
Confidence 2456888999999999973322 566666665443
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.89 E-value=5.2e-23 Score=210.10 Aligned_cols=274 Identities=16% Similarity=0.110 Sum_probs=225.6
Q ss_pred eEEEEEecC---CCCCCeEEEEEeeeeccccchhcccCCCCCCC-----CCCCccccCcccEEEEEeCCCCCccCCCCEE
Q 017335 28 LVIEEIEVE---PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-----LPLPVIFGHEAVGVVESVGEYVEEVKERDLV 99 (373)
Q Consensus 28 l~~~~~~~p---~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 99 (373)
+++.+-|.. +..++.=+..|-|+.||..|+++..|+.+.+. ......+|-|++|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 566666644 34678889999999999999999999876552 02225888899885 5779999
Q ss_pred EeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEcCCCCChhh
Q 017335 100 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 179 (373)
Q Consensus 100 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~l~~~~ 179 (373)
+... +.- +.++-+.++.+.+|.+|++...++
T Consensus 1499 M~mv------------------------------pAk-------------------sLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMV------------------------------PAK-------------------SLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEee------------------------------ehh-------------------hhhhhhhcchhhhhhCCcccchhh
Confidence 6432 222 788999999999999999999999
Q ss_pred hhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcC
Q 017335 180 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINP 254 (373)
Q Consensus 180 aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~ 254 (373)
|+..|+.+.|+|+++..++..++|+++||+++ |++|++|+.+|.+.|+ +|+.+..++||++++.+ +-.+++-|+
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 99999999999999999999999999999955 9999999999999999 99999999999999875 346778888
Q ss_pred CCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhhCcEEEEeecCC
Q 017335 255 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG 333 (373)
Q Consensus 255 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 333 (373)
++ .+|.+-+...|.| |+|+|++....+. ++.+++||..+ |||..+|...-++..++.+.-|++|.+++|..+-+
T Consensus 1609 Rd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDs 1683 (2376)
T KOG1202|consen 1609 RD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDS 1683 (2376)
T ss_pred cc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhh
Confidence 88 8999999999999 9999999999887 99999999997 99999998777777889998888999999986544
Q ss_pred CC--chhHHHHHHHHHHcCCCC----C---CcccccCCCccc
Q 017335 334 LK--PRSDIATLAQKYLDKVHL----R---SSFHLCDPNSDS 366 (373)
Q Consensus 334 ~~--~~~~~~~~~~~~~~g~i~----~---~~~~~~~~~~a~ 366 (373)
.. ..+.+.++.+++++|.-. | +.|+-.++.+||
T Consensus 1684 vmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AF 1725 (2376)
T KOG1202|consen 1684 VMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAF 1725 (2376)
T ss_pred hhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHH
Confidence 32 246677777777775432 2 445544544444
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=1.9e-23 Score=167.94 Aligned_cols=108 Identities=34% Similarity=0.596 Sum_probs=96.1
Q ss_pred CCeEEEEEeeeeccccchhcccCC-CCCCCCCCCccccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCC
Q 017335 40 AWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKS 118 (373)
Q Consensus 40 ~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~ 118 (373)
|+||||||.++|||++|++.+++. .... .+|.++|||++|+|+++|+++++|++||||++.+...|+.|++|+.+.+
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPP--KFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTS--SSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCC--CCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 689999999999999999999984 3333 8999999999999999999999999999999999989999999999999
Q ss_pred CcCccCCCCCCCCCCCCCCccccccCCceecccccccceeeeEEeeccceEEc
Q 017335 119 NTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 171 (373)
Q Consensus 119 ~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~l 171 (373)
++|.+... .|+..+| +|+||+.+|+++++++
T Consensus 79 ~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred ccCCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence 99988775 7777888 9999999999999975
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.77 E-value=8.3e-18 Score=139.10 Aligned_cols=128 Identities=30% Similarity=0.517 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHH
Q 017335 213 AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAF 291 (373)
Q Consensus 213 ~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~ 291 (373)
++|++++|+||.+|+ +|++++++++|++.++++|+++++++++ .++.+.+++.+++ ++|+||||+|....++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999996 9999999999999999999999999998 7899999999998 9999999999888899999
Q ss_pred HHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHHHHHHHHHc
Q 017335 292 NSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLD 349 (373)
Q Consensus 292 ~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~ 349 (373)
++++++ |+++.+|... ....+++...++. ++++.|+..+. .++++++++++.+
T Consensus 77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 999997 9999999965 4677889999888 99999997666 7899999998864
No 129
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.33 E-value=3.1e-11 Score=120.63 Aligned_cols=155 Identities=17% Similarity=0.157 Sum_probs=114.2
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCC----------CccHHHHHHH
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCG----------DKTVSQVIKE 268 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~----------~~~~~~~i~~ 268 (373)
..++++|+|+|+|.+|+++++.|+.+|+ +|+++|.++++++.++++|++.+ +|..+.. ..++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4689999999999999999999999999 89999999999999999999854 6654310 1133333333
Q ss_pred h-cC--CCccEEEECCCC-----HHH-HHHHHHHhccCCceEEEEcccCCCC-ccccCHHHHh--hCcEEEEeecCCCCc
Q 017335 269 M-TD--GGADYCFECIGL-----TSV-MNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEIL--KGRSVCGTYFGGLKP 336 (373)
Q Consensus 269 ~-~~--~~~d~vid~~g~-----~~~-~~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~--~~~~i~g~~~~~~~~ 336 (373)
. .+ +++|+||+|++. +.+ .+.+++.++++ |+++++|...++. ..+.+...++ ++++++|... ++
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence 3 33 279999999996 335 49999999997 9999999854443 3444444444 3899999852 22
Q ss_pred hhHHHHHHHHHHcCCCCCCcccc
Q 017335 337 RSDIATLAQKYLDKVHLRSSFHL 359 (373)
Q Consensus 337 ~~~~~~~~~~~~~g~i~~~~~~~ 359 (373)
.+...++.+++.++.++......
T Consensus 317 ~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred hhHHHHHHHHHHhCCccHHHHhc
Confidence 23344689999998887644443
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.19 E-value=6e-10 Score=108.77 Aligned_cols=143 Identities=13% Similarity=0.161 Sum_probs=112.5
Q ss_pred HHHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHh
Q 017335 191 VGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 191 ~~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~ 269 (373)
|.++.+..+ ..+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+++.++.+|++.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v--- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV--- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH---
Confidence 344555544 4689999999999999999999999999 89999999999999999998533 1 11122
Q ss_pred cCCCccEEEECCCCHHHHHHH-HHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEeecCCCCchhHHH--HHHH
Q 017335 270 TDGGADYCFECIGLTSVMNDA-FNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA--TLAQ 345 (373)
Q Consensus 270 ~~~~~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~--~~~~ 345 (373)
.++|+||+|+|....+... ++.++++ |+++.+|.. ..+++...+.. ++++.++..... ..+++ +.+.
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~ 326 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII 326 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence 2689999999998878875 9999997 999999963 34678877777 899998854321 12455 7999
Q ss_pred HHHcCCC-CCC
Q 017335 346 KYLDKVH-LRS 355 (373)
Q Consensus 346 ~~~~g~i-~~~ 355 (373)
++.+|++ +..
T Consensus 327 LLa~Grlvnl~ 337 (413)
T cd00401 327 LLAEGRLVNLG 337 (413)
T ss_pred hhhCcCCCCCc
Confidence 9999999 653
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=98.63 E-value=2.9e-09 Score=87.36 Aligned_cols=106 Identities=22% Similarity=0.315 Sum_probs=69.2
Q ss_pred cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC--CHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHH-hh
Q 017335 246 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG--LTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LK 322 (373)
Q Consensus 246 lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~-~~ 322 (373)
|||++|+|++. .++ ...+++|+|||++| .+..+..++++| ++ |+++.++. ....... ..
T Consensus 1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence 69999999987 666 22349999999999 666447777888 97 99999973 1122222 12
Q ss_pred CcEEEEeecCCC-C---chhHHHHHHHHHHcCCCCC---CcccccCCCcccccc
Q 017335 323 GRSVCGTYFGGL-K---PRSDIATLAQKYLDKVHLR---SSFHLCDPNSDSAGL 369 (373)
Q Consensus 323 ~~~i~g~~~~~~-~---~~~~~~~~~~~~~~g~i~~---~~~~~~~~~~a~~~~ 369 (373)
...+....+... . ..+.++++++++.+|+|++ +.|+++++.+|+..+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l 116 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERL 116 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHH
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHH
Confidence 334444433321 1 2456999999999999998 789999999988654
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.57 E-value=4.9e-07 Score=90.44 Aligned_cols=127 Identities=19% Similarity=0.175 Sum_probs=91.4
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCC----------CCccHHHHHHHh
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATC----------GDKTVSQVIKEM 269 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~----------~~~~~~~~i~~~ 269 (373)
.++++|+|+|+|.+|++++++++.+|+ .|++++.++++++.++++|++.+ ++..+. ..+++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467999999999999999999999999 79999999999999999998763 332110 012344444443
Q ss_pred cC---CCccEEEECC---CCHH---HHHHHHHHhccCCceEEEEcccCCCCccccC--HHHHh-h-CcEEEEee
Q 017335 270 TD---GGADYCFECI---GLTS---VMNDAFNSSREGWGKTVILGVEMHGSPISLN--SIEIL-K-GRSVCGTY 330 (373)
Q Consensus 270 ~~---~~~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~--~~~~~-~-~~~i~g~~ 330 (373)
.. .++|+||+|+ |.+. ..+..++.+++| +.+++++..++++ ++.. ...+. . ++.+.|..
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GGn-~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGGN-CEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCCC-EEEecCceEEEecCCEEEEeeC
Confidence 33 2799999999 5422 567889999997 9999999876663 3322 11112 2 47777764
No 133
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.39 E-value=2.3e-08 Score=98.92 Aligned_cols=159 Identities=18% Similarity=0.209 Sum_probs=107.5
Q ss_pred cccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceeccccc
Q 017335 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 153 (373)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~ 153 (373)
.-|.|+++.+.+|++++++ +|++.+.+ ||+|.+| ++.|...+. .|...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~----------------- 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER----------------- 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence 4688999999999998876 66666666 8999998 556655554 3433444
Q ss_pred ccceeeeEEeeccceEE---c-CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCe
Q 017335 154 ISSFTEYSVVDITHVVK---I-TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 229 (373)
Q Consensus 154 ~g~~a~~~~v~~~~~~~---l-P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~ 229 (373)
.|++++.++. .+.. + +..++...+| ...+.+..+..++++|+|+|+|.+|..+++.++..|+.+
T Consensus 139 --lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 139 --LFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred --HHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 7898888765 3332 3 2223322221 111233444567899999999999999999999999669
Q ss_pred EEEEcCChhHHH-HHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH
Q 017335 230 IIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 285 (373)
Q Consensus 230 Vi~~~~~~~~~~-~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 285 (373)
|++++++.++.. +++++|.. .+.. .+..+.+ .++|+||+|++.+.
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l-----~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYL-----AEADIVISSTGAPH 252 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHH-----hhCCEEEECCCCCC
Confidence 999999988755 56667753 2221 1222222 26999999998655
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.29 E-value=1.3e-05 Score=78.92 Aligned_cols=103 Identities=18% Similarity=0.229 Sum_probs=80.0
Q ss_pred HHHHHHHHhCCC-CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHH
Q 017335 190 GVGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKE 268 (373)
Q Consensus 190 a~~~~~~~~~~~-~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~ 268 (373)
.|.++.+...+. +|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|++ +. ++.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal-- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA-- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH--
Confidence 344444443544 89999999999999999999999999 999999999887777666764 32 121111
Q ss_pred hcCCCccEEEECCCCHHHHH-HHHHHhccCCceEEEEcccC
Q 017335 269 MTDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVEM 308 (373)
Q Consensus 269 ~~~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~~ 308 (373)
.++|+||+++|....+. ..+..++++ +.++..|...
T Consensus 266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 27999999999887676 688999997 9999999754
No 135
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.28 E-value=1.6e-06 Score=80.95 Aligned_cols=101 Identities=28% Similarity=0.394 Sum_probs=72.8
Q ss_pred HhCCCCCCEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHHc----CCceEEcCCCCCCccHHHHHHHhc-
Q 017335 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMT- 270 (373)
Q Consensus 197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~l----ga~~vi~~~~~~~~~~~~~i~~~~- 270 (373)
...++++++||.+|+|. |..+.++++..|.. +|++++.+++..+.+++. |...+-. .. .+ +.++.
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~-~~---~d----~~~l~~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEF-RL---GE----IEALPV 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEE-EE---cc----hhhCCC
Confidence 35788999999999988 88888888887753 799999999998888763 3322210 00 12 22222
Q ss_pred -CCCccEEEECC------CCHHHHHHHHHHhccCCceEEEEccc
Q 017335 271 -DGGADYCFECI------GLTSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 271 -~~~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
++.||+|+... .....+..+++.|++| |++++.+..
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~ 185 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVV 185 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEee
Confidence 34799999543 3345689999999997 999988764
No 136
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.23 E-value=3.3e-05 Score=72.97 Aligned_cols=111 Identities=17% Similarity=0.239 Sum_probs=83.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 281 (373)
.+++|+|+|.|.+|+.++..++.+|+ +|+++++++++.+.++++|++.+ .. .+ +.+.. .++|+||+|+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~----l~~~l-~~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SE----LAEEV-GKIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HH----HHHHh-CCCCEEEECC
Confidence 68999999999999999999999999 99999999998888888887532 11 11 22222 2699999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh-CcEEEEe
Q 017335 282 GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGT 329 (373)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~-~~~i~g~ 329 (373)
+........++.++++ +.+++++..+.+. .+. .... +++..+.
T Consensus 219 p~~~i~~~~l~~~~~g-~vIIDla~~pggt--d~~--~a~~~Gv~~~~~ 262 (296)
T PRK08306 219 PALVLTKEVLSKMPPE-ALIIDLASKPGGT--DFE--YAEKRGIKALLA 262 (296)
T ss_pred ChhhhhHHHHHcCCCC-cEEEEEccCCCCc--Cee--ehhhCCeEEEEE
Confidence 8765556778889997 9999998865542 332 2223 6777653
No 137
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.19 E-value=1.6e-05 Score=73.24 Aligned_cols=133 Identities=20% Similarity=0.252 Sum_probs=86.8
Q ss_pred ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC
Q 017335 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (373)
Q Consensus 156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~ 235 (373)
+|.+|.. +...++.+++++++..+..-. +..+ ...+. ..+.++++||.+|+|. |.+++.+++ .|..+|+++|.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~~-l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRLC-LEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHHH-HHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4666644 777889999999888776333 2221 11121 1257899999999988 887776554 67757999999
Q ss_pred ChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC--CccEEEECCCCHH---HHHHHHHHhccCCceEEEEccc
Q 017335 236 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG--GADYCFECIGLTS---VMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 236 ~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~--~~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
++...+.+++.....-+. .. . ....+ .||+|+....... .+..+.+.|+++ |++++.|..
T Consensus 151 s~~~l~~A~~n~~~~~~~-~~---~-------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVE-LN---V-------YLPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCC-ce---E-------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 999888776521100000 00 0 01112 5999997665432 466788899997 999998764
No 138
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.18 E-value=3.5e-05 Score=75.41 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=78.7
Q ss_pred HHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhc
Q 017335 192 GAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 192 ~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~ 270 (373)
.++.+..+ ..+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.+ ..+.+
T Consensus 183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal---- 248 (406)
T TIGR00936 183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA---- 248 (406)
T ss_pred HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH----
Confidence 33444434 4689999999999999999999999999 899999998887777777763 321 11122
Q ss_pred CCCccEEEECCCCHHHHHH-HHHHhccCCceEEEEccc
Q 017335 271 DGGADYCFECIGLTSVMND-AFNSSREGWGKTVILGVE 307 (373)
Q Consensus 271 ~~~~d~vid~~g~~~~~~~-~~~~l~~~~G~~v~~G~~ 307 (373)
.+.|+||+++|....++. .+..++++ +.++.+|..
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 268999999999887764 88999997 999999875
No 139
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.08 E-value=1.5e-07 Score=93.36 Aligned_cols=160 Identities=18% Similarity=0.155 Sum_probs=97.2
Q ss_pred cccCcccEEEEEeCCCCCccCCCCEEEeeCCCCCCCCccccCCCCCcCccCCCCCCCCCCCCCCccccccCCceeccccc
Q 017335 74 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 153 (373)
Q Consensus 74 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~G~~~~~~~~~~~~~~~~~ 153 (373)
.-|||+++.+.+|++++++.-+|. +.+ ||+|. +.+..|...+. .|...++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk----~a~~~a~~~g~---~g~~l~~----------------- 140 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVK----DAYALAQEAGT---VGTILNR----------------- 140 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHH----HHHHHHHHcCC---chHHHHH-----------------
Confidence 459999999999999987744444 333 44443 22233333222 1111122
Q ss_pred ccceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhC---CCCCCEEEEECCChHHHHHHHHHHHCCCCeE
Q 017335 154 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGLGAVGLAVAEGARLNRASKI 230 (373)
Q Consensus 154 ~g~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~---~~~~~~VlI~G~G~vG~~a~~la~~~G~~~V 230 (373)
.|++.+.+ |..+..+.+. ...+.++++.++..... -.++++|+|+|+|.+|.++++.++..|+.+|
T Consensus 141 --lf~~a~~~--------~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 141 --LFQKAFSV--------AKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred --HHHHHHHH--------HhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 45544333 3333322222 22255555655433222 3578999999999999999999999998789
Q ss_pred EEEcCChhHHH-HHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH
Q 017335 231 IGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 285 (373)
Q Consensus 231 i~~~~~~~~~~-~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 285 (373)
++++++.++.. +++++|++ +++. .++.+.+ .++|+||+|++.+.
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~-----~~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPL-----DELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeH-----HHHHHHh-----ccCCEEEECCCCCC
Confidence 99999988865 56677753 3321 1121111 26899999999754
No 140
>PLN02494 adenosylhomocysteinase
Probab=98.01 E-value=7.4e-05 Score=73.93 Aligned_cols=101 Identities=21% Similarity=0.274 Sum_probs=79.8
Q ss_pred HHHHHHHhCC-CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHh
Q 017335 191 VGAAWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 191 ~~~~~~~~~~-~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~ 269 (373)
+.++.+..++ -.|++|+|+|.|.+|+.+++.++.+|+ +|+++++++.+...+...|+. ++ +..+.+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~-vv--------~leEal--- 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQ-VL--------TLEDVV--- 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCe-ec--------cHHHHH---
Confidence 4445555554 679999999999999999999999999 899999998887777777764 22 122222
Q ss_pred cCCCccEEEECCCCHHH-HHHHHHHhccCCceEEEEccc
Q 017335 270 TDGGADYCFECIGLTSV-MNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 270 ~~~~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~G~~ 307 (373)
..+|+++++.|.... ....+..++++ +.++.+|..
T Consensus 308 --~~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 308 --SEADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred --hhCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 158999999998764 47899999997 999999974
No 141
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.01 E-value=2.1e-05 Score=74.88 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=79.8
Q ss_pred cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCC---CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHH-H
Q 017335 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV---EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-E 241 (373)
Q Consensus 166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~---~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~-~ 241 (373)
+.++++|+.+..+.++... ++++++.++...... .++.+|+|+|+|.+|..+++.++..|..+|+++++++++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 4667888988888887766 677777754333222 4789999999999999999999988877899999998875 5
Q ss_pred HHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHH
Q 017335 242 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV 286 (373)
Q Consensus 242 ~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 286 (373)
+++++|+. +++. .++.+.+ ..+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~-----~~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL-----DELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH-----HHHHHHH-----hcCCEEEECCCCCch
Confidence 66778873 3321 1222222 258999999998764
No 142
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.94 E-value=3.5e-05 Score=68.01 Aligned_cols=121 Identities=18% Similarity=0.199 Sum_probs=87.0
Q ss_pred CCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcC
Q 017335 172 TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFG 247 (373)
Q Consensus 172 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~----~~~lg 247 (373)
+..++....-.+..+...|. +.....++++++||-+|+|+ |..++-+++..| +|+.+++.++-.+. ++.+|
T Consensus 44 d~~lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg 118 (209)
T COG2518 44 DRALPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLG 118 (209)
T ss_pred CCcccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcC
Confidence 34444555555555656554 56888999999999999988 999999999999 89999998874444 45678
Q ss_pred CceEEcCCCCCCccHHHHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335 248 ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 248 a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
...|..... | ....+.+. .||.|+-+.+.+..-..+++.|++| |+++.--
T Consensus 119 ~~nV~v~~g----D---G~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~Pv 169 (209)
T COG2518 119 YENVTVRHG----D---GSKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPV 169 (209)
T ss_pred CCceEEEEC----C---cccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEE
Confidence 644322221 1 11223333 8999998888777568899999997 9987653
No 143
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.79 E-value=0.00028 Score=66.35 Aligned_cols=95 Identities=16% Similarity=0.221 Sum_probs=72.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 281 (373)
.|++|+|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ .. .+ +.+.. .++|+|++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~-----~~----l~~~l-~~aDiVint~ 217 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL-----NK----LEEKV-AEIDIVINTI 217 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH-----HH----HHHHh-ccCCEEEECC
Confidence 57899999999999999999999999 99999999888777777765322 11 11 22222 2799999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335 282 GLTSVMNDAFNSSREGWGKTVILGVEMH 309 (373)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 309 (373)
+....-...++.++++ ..+++++..+.
T Consensus 218 P~~ii~~~~l~~~k~~-aliIDlas~Pg 244 (287)
T TIGR02853 218 PALVLTADVLSKLPKH-AVIIDLASKPG 244 (287)
T ss_pred ChHHhCHHHHhcCCCC-eEEEEeCcCCC
Confidence 8654335677888997 99999987554
No 144
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.78 E-value=0.00024 Score=69.23 Aligned_cols=101 Identities=21% Similarity=0.210 Sum_probs=71.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.+ ++......... ..++ .+.. ..+|+||+|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l----~~~l-~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEI----EDAV-KRADLLIGA 237 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHH----HHHH-ccCCEEEEc
Confidence 34569999999999999999999999 89999999888877654 45432222221 0222 2222 268999999
Q ss_pred CC---C--HH-HHHHHHHHhccCCceEEEEcccCCCC
Q 017335 281 IG---L--TS-VMNDAFNSSREGWGKTVILGVEMHGS 311 (373)
Q Consensus 281 ~g---~--~~-~~~~~~~~l~~~~G~~v~~G~~~~~~ 311 (373)
++ . +. .....++.++++ +.+++++..+++.
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~GG~ 273 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQGGC 273 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCCCC
Confidence 73 2 21 236777889997 9999999866654
No 145
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.78 E-value=1.3e-05 Score=82.67 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=59.7
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC---------------------hhHHHHHHHcCCceEEcCCCC
Q 017335 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---------------------PEKFEIGKKFGITDFINPATC 257 (373)
Q Consensus 199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~---------------------~~~~~~~~~lga~~vi~~~~~ 257 (373)
..++|++|+|+|+|+.|+.+++.++..|+ +|++++.. +.+.+.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 79989853 345677888998877764320
Q ss_pred CCccHHHHHHHhcCCCccEEEECCCCHH
Q 017335 258 GDKTVSQVIKEMTDGGADYCFECIGLTS 285 (373)
Q Consensus 258 ~~~~~~~~i~~~~~~~~d~vid~~g~~~ 285 (373)
.+... +.+ ..++|+||+++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 00111 111 226999999999754
No 146
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.77 E-value=0.00039 Score=69.00 Aligned_cols=100 Identities=19% Similarity=0.267 Sum_probs=76.9
Q ss_pred HHHHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhc
Q 017335 192 GAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 192 ~~~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~ 270 (373)
.++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..+ ++.+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~---------~leell---- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV---------TLEDVV---- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec---------cHHHHH----
Confidence 33444433 4579999999999999999999999999 89999988877655555665321 222222
Q ss_pred CCCccEEEECCCCHHHHH-HHHHHhccCCceEEEEccc
Q 017335 271 DGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 271 ~~~~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~G~~ 307 (373)
..+|+|+.++|....+. ..+..++++ +.++.+|..
T Consensus 308 -~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 308 -ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred -hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 26899999999877665 899999997 999999875
No 147
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.75 E-value=0.00021 Score=67.30 Aligned_cols=127 Identities=17% Similarity=0.234 Sum_probs=77.1
Q ss_pred cceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH
Q 017335 166 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 245 (373)
Q Consensus 166 ~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~ 245 (373)
...+.+..++.+..+.--...++ ...+ .. ...++++||-+|+|. |.+++.+++ .|..+|++++.++...+.+++
T Consensus 127 ~~~i~ldpg~aFgtG~h~tt~l~--l~~l-~~-~~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~ 200 (288)
T TIGR00406 127 ALIIMLDPGLAFGTGTHPTTSLC--LEWL-ED-LDLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARK 200 (288)
T ss_pred cEEEEECCCCcccCCCCHHHHHH--HHHH-Hh-hcCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHH
Confidence 45566666665554432221111 1111 11 246789999999988 877777665 566699999999988777764
Q ss_pred c----CCc-eEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH---HHHHHHHHHhccCCceEEEEccc
Q 017335 246 F----GIT-DFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 246 l----ga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
. +.. .+.... .+ .....+++||+|+...... ..+..+.+.|+++ |.++..|..
T Consensus 201 n~~~n~~~~~~~~~~----~~----~~~~~~~~fDlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 201 NAELNQVSDRLQVKL----IY----LEQPIEGKADVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred HHHHcCCCcceEEEe----cc----cccccCCCceEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 2 211 111100 11 1112234899999655433 3466788999997 999988763
No 148
>PRK08324 short chain dehydrogenase; Validated
Probab=97.60 E-value=0.00041 Score=73.19 Aligned_cols=137 Identities=20% Similarity=0.233 Sum_probs=87.7
Q ss_pred ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc
Q 017335 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD 234 (373)
Q Consensus 156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~ 234 (373)
++.+|..+|+..++.+ +..+.+++..-..+ .....+|++|||+|+ |++|+.+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5677888887777766 55666666421100 122346899999997 9999999999999999 999999
Q ss_pred CChhHHHHHHH-cCC---ceE--EcCCCCCCccHHHHHHHhc--CCCccEEEECCCC-----------------------
Q 017335 235 INPEKFEIGKK-FGI---TDF--INPATCGDKTVSQVIKEMT--DGGADYCFECIGL----------------------- 283 (373)
Q Consensus 235 ~~~~~~~~~~~-lga---~~v--i~~~~~~~~~~~~~i~~~~--~~~~d~vid~~g~----------------------- 283 (373)
++.++.+.+.+ ++. ..+ .|-.+ ..++.+.+.+.. .+++|++|++.|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99887666543 432 112 23222 122333333322 2379999999982
Q ss_pred --HHHHHHHHHHhcc---CCceEEEEccc
Q 017335 284 --TSVMNDAFNSSRE---GWGKTVILGVE 307 (373)
Q Consensus 284 --~~~~~~~~~~l~~---~~G~~v~~G~~ 307 (373)
...++.+++.++. + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1234455666655 5 889988864
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.49 E-value=0.00052 Score=57.01 Aligned_cols=96 Identities=21% Similarity=0.210 Sum_probs=63.4
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc--eEEcCCCCCCccHHHHHHHhcCCCccEE
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGADYC 277 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d~v 277 (373)
-.+.+++|+|+|++|.+++..+...|+++|+++.|+.+|.+.+. .++.. .++..++ +.+.+ ..+|+|
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~-----~~~Div 79 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEAL-----QEADIV 79 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHH-----HTESEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHH-----hhCCeE
Confidence 46899999999999999999999999988999999999877764 45322 2333322 21111 279999
Q ss_pred EECCCCHHH--HHHHHHHhcc-CCceEEEEccc
Q 017335 278 FECIGLTSV--MNDAFNSSRE-GWGKTVILGVE 307 (373)
Q Consensus 278 id~~g~~~~--~~~~~~~l~~-~~G~~v~~G~~ 307 (373)
|+|++.... ....+....+ - +.+++++.+
T Consensus 80 I~aT~~~~~~i~~~~~~~~~~~~-~~v~Dla~P 111 (135)
T PF01488_consen 80 INATPSGMPIITEEMLKKASKKL-RLVIDLAVP 111 (135)
T ss_dssp EE-SSTTSTSSTHHHHTTTCHHC-SEEEES-SS
T ss_pred EEecCCCCcccCHHHHHHHHhhh-hceeccccC
Confidence 999987641 1222222222 1 477888753
No 150
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.42 E-value=0.0015 Score=63.97 Aligned_cols=112 Identities=13% Similarity=0.147 Sum_probs=77.0
Q ss_pred cchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccH
Q 017335 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 262 (373)
Q Consensus 183 l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~ 262 (373)
+..+-...+..+.+...++++++||.+|+|. |..+..+++..|+ +|++++.+++..+.+++.....-+.... .++
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~ 222 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY 222 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch
Confidence 3334444555566778899999999999965 7788888988898 9999999999999987643211111111 122
Q ss_pred HHHHHHhcCCCccEEEEC-----CCC---HHHHHHHHHHhccCCceEEEEc
Q 017335 263 SQVIKEMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 263 ~~~i~~~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~G 305 (373)
+++ ++.+|.|+.. +|. ...+..+.+.|+++ |++++..
T Consensus 223 ----~~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 223 ----RDL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred ----hhc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 122 3479998743 343 34578889999997 9988753
No 151
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.38 E-value=0.001 Score=62.52 Aligned_cols=136 Identities=21% Similarity=0.333 Sum_probs=81.3
Q ss_pred ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcC
Q 017335 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 235 (373)
Q Consensus 156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~ 235 (373)
.|.+|-.-+...++.|.+++.+....--.+.++.-+ +.+. .++|++||=+|+|+ |.+++..++ +|+++|+++|.
T Consensus 119 ~w~~~~~~~~~~~I~idPg~AFGTG~H~TT~lcl~~--l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~Di 192 (295)
T PF06325_consen 119 SWEEYPEPPDEIVIEIDPGMAFGTGHHPTTRLCLEL--LEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDI 192 (295)
T ss_dssp TT----SSTTSEEEEESTTSSS-SSHCHHHHHHHHH--HHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEES
T ss_pred CCcccCCCCCcEEEEECCCCcccCCCCHHHHHHHHH--HHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecC
Confidence 455552224567788888887777755443333211 2222 67889999999876 666666665 58889999999
Q ss_pred ChhHHHHHHH----cCC-ceE-EcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH---HHHHHHHHhccCCceEEEEcc
Q 017335 236 NPEKFEIGKK----FGI-TDF-INPATCGDKTVSQVIKEMTDGGADYCFECIGLTS---VMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 236 ~~~~~~~~~~----lga-~~v-i~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~G~ 306 (373)
++...+.+++ -|. +.+ +.... + ...+.||+|+-.+-... ....+.+.++++ |.+++.|.
T Consensus 193 Dp~Av~~a~~N~~~N~~~~~~~v~~~~----~-------~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGI 260 (295)
T PF06325_consen 193 DPLAVEAARENAELNGVEDRIEVSLSE----D-------LVEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGI 260 (295)
T ss_dssp SCHHHHHHHHHHHHTT-TTCEEESCTS----C-------TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEEEec----c-------cccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccc
Confidence 9876666543 222 122 21111 1 11248999997666544 244566778997 99999998
Q ss_pred cCC
Q 017335 307 EMH 309 (373)
Q Consensus 307 ~~~ 309 (373)
...
T Consensus 261 l~~ 263 (295)
T PF06325_consen 261 LEE 263 (295)
T ss_dssp EGG
T ss_pred cHH
Confidence 654
No 152
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.38 E-value=0.0023 Score=55.55 Aligned_cols=102 Identities=18% Similarity=0.329 Sum_probs=72.4
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE 268 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~ 268 (373)
+.+.++++|+.++-+|+|. |..++++++..-..+|++++++++..+..+ ++|.+. ++..+. + +.+.+
T Consensus 27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A---p---~~L~~ 99 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA---P---EALPD 99 (187)
T ss_pred HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc---h---HhhcC
Confidence 3556889999999999876 777888885444449999999999887764 588763 443332 2 22222
Q ss_pred hcCCCccEEEECCCC--HHHHHHHHHHhccCCceEEEEcc
Q 017335 269 MTDGGADYCFECIGL--TSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 269 ~~~~~~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
+. .+|.+|---|. +..++.++..|+++ |++|.-..
T Consensus 100 ~~--~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 100 LP--SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred CC--CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 21 69999955443 44688999999997 99886654
No 153
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.38 E-value=0.003 Score=55.93 Aligned_cols=103 Identities=18% Similarity=0.336 Sum_probs=70.9
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcC-CceEEcCCCCCCccHHHHHHH
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFG-ITDFINPATCGDKTVSQVIKE 268 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lg-a~~vi~~~~~~~~~~~~~i~~ 268 (373)
.....+.++++||.+|+|. |..++.+++..+. .+|++++.+++..+.++ ++| .+.+.... .+..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~ 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFT 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhh
Confidence 3456889999999999988 8899999987652 38999999998877664 355 33222111 122222222
Q ss_pred hcCCCccEEEECCCC---HHHHHHHHHHhccCCceEEEE
Q 017335 269 MTDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 269 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 304 (373)
. .+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 108 ~-~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 108 I-NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred c-CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2 2379999985553 34577888899997 998853
No 154
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.36 E-value=0.0031 Score=56.98 Aligned_cols=104 Identities=22% Similarity=0.258 Sum_probs=68.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc---CCceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF---GITDFINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~l---ga~~vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
.+++|+|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +..+.+..+-.....+.+.+.+... +++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999998 8999999999999999 999999998877665 222 2223332222111223222222211 368
Q ss_pred cEEEECCCCH-----------------------HHHHHHHHHhccCCceEEEEccc
Q 017335 275 DYCFECIGLT-----------------------SVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 275 d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
|.++.+.+.. ..++...+.++++ |+++.++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 9999888742 1244556667786 999988764
No 155
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.28 E-value=0.0038 Score=59.57 Aligned_cols=103 Identities=23% Similarity=0.326 Sum_probs=72.8
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKE 268 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~ 268 (373)
+.+...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+.+..
T Consensus 72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~ 146 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPE 146 (322)
T ss_pred HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhcccc
Confidence 34566788999999999985 9999999998763 36999999998766654 35654332211 122211111
Q ss_pred hcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335 269 MTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 269 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
.+.+|+|+.+.+........++.|+++ |+++..
T Consensus 147 --~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 --FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred --cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 137999999888777667889999997 997763
No 156
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.21 E-value=0.016 Score=54.60 Aligned_cols=137 Identities=10% Similarity=0.079 Sum_probs=90.4
Q ss_pred ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHHHhC---CCCCCEEEEECC-ChHHHHHHHHHH-HCCCCeE
Q 017335 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGL-GAVGLAVAEGAR-LNRASKI 230 (373)
Q Consensus 156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~---~~~~~~VlI~G~-G~vG~~a~~la~-~~G~~~V 230 (373)
.|-+|.++..+.... +.....++..-+ -+.|.|. +.+-.. .-..+.|+|.++ +-+++.++.+++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~--~~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYD--PEREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccC--cchhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 477777766554331 122223333333 5667775 433322 334567888887 788988888888 4554499
Q ss_pred EEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335 231 IGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 231 i~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
|++. ++.+..+.+++|. ++|+.+++ |..+....--+++|..|+..+...+-+.+...--..+.+|.
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~ 232 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGA 232 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEc
Confidence 9999 4555668899995 88888875 44443446678889999999888888888775234677776
No 157
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.17 E-value=0.015 Score=49.50 Aligned_cols=109 Identities=18% Similarity=0.272 Sum_probs=71.5
Q ss_pred HHHHhC-CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335 194 AWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG 272 (373)
Q Consensus 194 ~~~~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~ 272 (373)
+.+..+ .-.|++++|.|-|.+|.-.++.++.+|+ +|++++.++.+.-.+..-|.+ +. .+.+ .. .
T Consensus 13 i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~~----a~-~ 77 (162)
T PF00670_consen 13 IMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLEE----AL-R 77 (162)
T ss_dssp HHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HHH----HT-T
T ss_pred HHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHHH----HH-h
Confidence 334444 5689999999999999999999999999 999999999888777766753 22 1222 21 2
Q ss_pred CccEEEECCCCHHH-HHHHHHHhccCCceEEEEcccCCCCccccCHHHHhh
Q 017335 273 GADYCFECIGLTSV-MNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK 322 (373)
Q Consensus 273 ~~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~~~~~ 322 (373)
..|+++.++|.... -..-++.|+++ ..+..+|.. ..+++...+..
T Consensus 78 ~adi~vtaTG~~~vi~~e~~~~mkdg-ail~n~Gh~----d~Eid~~~L~~ 123 (162)
T PF00670_consen 78 DADIFVTATGNKDVITGEHFRQMKDG-AILANAGHF----DVEIDVDALEA 123 (162)
T ss_dssp T-SEEEE-SSSSSSB-HHHHHHS-TT-EEEEESSSS----TTSBTHHHHHT
T ss_pred hCCEEEECCCCccccCHHHHHHhcCC-eEEeccCcC----ceeEeeccccc
Confidence 68999999997663 35778889996 777777753 33666666554
No 158
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.16 E-value=0.0015 Score=51.70 Aligned_cols=92 Identities=26% Similarity=0.346 Sum_probs=62.8
Q ss_pred CCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHHH-c---CC-ceE-EcCCCCCCccHHHHHHHhcCCCc
Q 017335 202 VGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKK-F---GI-TDF-INPATCGDKTVSQVIKEMTDGGA 274 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~~-l---ga-~~v-i~~~~~~~~~~~~~i~~~~~~~~ 274 (373)
|+.+||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++ . +. +.+ +... ++ . ......++|
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~-~~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-E-FDPDFLEPF 71 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-H-GGTTTSSCE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-c-cCcccCCCC
Confidence 688999999987 888888888 4677 99999999998888764 2 21 222 1111 22 1 111112379
Q ss_pred cEEEECC-CC---H------HHHHHHHHHhccCCceEEE
Q 017335 275 DYCFECI-GL---T------SVMNDAFNSSREGWGKTVI 303 (373)
Q Consensus 275 d~vid~~-g~---~------~~~~~~~~~l~~~~G~~v~ 303 (373)
|+|+... .. . ..++.+.+.|+++ |+++.
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 9999766 21 1 2478899999997 99875
No 159
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.15 E-value=0.0059 Score=54.77 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=73.2
Q ss_pred hhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCC
Q 017335 186 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCG 258 (373)
Q Consensus 186 ~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~ 258 (373)
+...++ +.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ .|.. .++..+.
T Consensus 62 p~~~~~--~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-- 136 (212)
T PRK13942 62 IHMVAI--MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-- 136 (212)
T ss_pred HHHHHH--HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc--
Confidence 444443 45667889999999999987 7788888887763 399999999987776653 4432 2333222
Q ss_pred CccHHHHHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335 259 DKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 259 ~~~~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
.. ...+ +.||+|+-..........+++.|++| |+++..
T Consensus 137 -~~------~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 137 -TL------GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -cc------CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 00 1112 37999986555555577899999997 998764
No 160
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.04 E-value=0.0054 Score=54.68 Aligned_cols=101 Identities=16% Similarity=0.178 Sum_probs=69.6
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCc---eEEcCCCCCCccHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGIT---DFINPATCGDKTVSQV 265 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~---~vi~~~~~~~~~~~~~ 265 (373)
+.+...++++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.++ +.|.. .++..+. .+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~ 136 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG 136 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence 45666788999999999977 778888888764 238999999988766654 34432 2333222 111
Q ss_pred HHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335 266 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 266 i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+. ..+.||+|+-+.......+.+++.|++| |+++..
T Consensus 137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred Cc--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 10 1237999997766556567888999997 998764
No 161
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.03 E-value=0.0013 Score=58.89 Aligned_cols=109 Identities=17% Similarity=0.260 Sum_probs=71.9
Q ss_pred cchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHH----HcCCce--EEcCC
Q 017335 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGK----KFGITD--FINPA 255 (373)
Q Consensus 183 l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~----~lga~~--vi~~~ 255 (373)
++.+...|. +.+...+++|++||-+|+|. |..++.+++..|.. +|+.+++.++-.+.++ ++|.+. ++..+
T Consensus 55 is~P~~~a~--~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd 131 (209)
T PF01135_consen 55 ISAPSMVAR--MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD 131 (209)
T ss_dssp E--HHHHHH--HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-
T ss_pred chHHHHHHH--HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc
Confidence 333444443 56778899999999999987 88888899888743 6999999887655553 456543 33222
Q ss_pred CCCCccHHHHHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335 256 TCGDKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 256 ~~~~~~~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
. ...+.. +.||.|+-+.+.+..-...++.|++| |+++..
T Consensus 132 g---------~~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 132 G---------SEGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp G---------GGTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred h---------hhccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 1 111222 38999998888777567899999997 998874
No 162
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.01 E-value=0.011 Score=54.49 Aligned_cols=81 Identities=20% Similarity=0.263 Sum_probs=57.4
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCc-eEEcCCCCCCccHHHHHHH-hcCC
Q 017335 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT-DFINPATCGDKTVSQVIKE-MTDG 272 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~-~vi~~~~~~~~~~~~~i~~-~~~~ 272 (373)
..+.++||+|+ +++|...+..+...|+ +++.+.|+++|++.+.+ .|.. +++..+- .+.+-...+.+ +...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DL-s~~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADL-SDPEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcC-CChhHHHHHHHHHHhc
Confidence 46789999999 8999999999999999 99999999999888743 2221 2333222 22333333333 3222
Q ss_pred --CccEEEECCCC
Q 017335 273 --GADYCFECIGL 283 (373)
Q Consensus 273 --~~d~vid~~g~ 283 (373)
.+|+.+++.|.
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 79999999885
No 163
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=96.99 E-value=0.0049 Score=55.66 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=59.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC--c--eEEcCCCCCCccHHHHHHHhcCC--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI--T--DFINPATCGDKTVSQVIKEMTDG--G 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga--~--~vi~~~~~~~~~~~~~i~~~~~~--~ 273 (373)
.++.++|+|+ +++|.+.++.+...|+ +|+.+.|..++++.++ +++. - ..+|-.+ ..++...+..+... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 4578999999 8999999999999999 9999999999988875 4762 1 2333333 23455555555544 6
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+.++..|.
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999999885
No 164
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.96 E-value=0.012 Score=51.67 Aligned_cols=103 Identities=20% Similarity=0.256 Sum_probs=63.8
Q ss_pred HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-Ccc
Q 017335 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GAD 275 (373)
Q Consensus 197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d 275 (373)
...++++++||.+|+|+-++......+..+..+|++++.++.. +..+.. ++..+. .+.+..+.+.+..++ ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~-~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDF-TDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeC-CChhHHHHHHHHhCCCCcc
Confidence 3457899999999998744433333333344489999998754 112333 332221 113334455555545 899
Q ss_pred EEEE-CC----CC------------HHHHHHHHHHhccCCceEEEEcc
Q 017335 276 YCFE-CI----GL------------TSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 276 ~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
+|+. .. |. ...+..+.+.|+++ |+++....
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~~ 147 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKVF 147 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEEc
Confidence 9994 32 21 34578889999997 99988643
No 165
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.95 E-value=0.0083 Score=56.20 Aligned_cols=140 Identities=21% Similarity=0.304 Sum_probs=83.6
Q ss_pred ceeeeEEeeccceEEcCCCCChhhhhccchhhhhHHHHHHH-HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEc
Q 017335 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWK-VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD 234 (373)
Q Consensus 156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~-~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~ 234 (373)
+|.+|..-....+++|.+++.+...--- .|.++ +.- -...+++.+||=+|+|+ |.+++..+ .+|+.+|+++|
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAFGTG~Hp----TT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa~-kLGA~~v~g~D 192 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAFGTGTHP----TTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAAA-KLGAKKVVGVD 192 (300)
T ss_pred CCccCCCCCCceEEEEccccccCCCCCh----hHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHHH-HcCCceEEEec
Confidence 4555433224667888888866544332 33332 211 12356999999999977 77666554 46666999999
Q ss_pred CChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH---HHHHHHHHHhccCCceEEEEccc
Q 017335 235 INPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 235 ~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
.++...+.+++ -+........ .+ .......++.+|+|+-.+=.. ...+.+.+.++++ |++++.|..
T Consensus 193 iDp~AV~aa~eNa~~N~v~~~~~~~-----~~-~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 193 IDPQAVEAARENARLNGVELLVQAK-----GF-LLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred CCHHHHHHHHHHHHHcCCchhhhcc-----cc-cchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 99876665543 2332100000 00 011112224899999655322 2466788899997 999999985
Q ss_pred CC
Q 017335 308 MH 309 (373)
Q Consensus 308 ~~ 309 (373)
..
T Consensus 266 ~~ 267 (300)
T COG2264 266 ED 267 (300)
T ss_pred Hh
Confidence 43
No 166
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.84 E-value=0.022 Score=45.62 Aligned_cols=102 Identities=19% Similarity=0.318 Sum_probs=69.4
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHH
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKE 268 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~ 268 (373)
.....+.++++|+-+|+|. |..+..+++..+..+|++++.++...+.+++ .+.. .++..+. ... ..
T Consensus 12 ~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~- 83 (124)
T TIGR02469 12 LSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LE- 83 (124)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Ch-
Confidence 4455677889999999987 8888899988754599999999988777643 4432 2222221 110 11
Q ss_pred hcCCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEc
Q 017335 269 MTDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 269 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G 305 (373)
...+.+|+|+...+. ...+..+.+.|+++ |+++...
T Consensus 84 ~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 84 DSLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred hhcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 112379999975533 23688899999997 9988653
No 167
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.02 Score=51.59 Aligned_cols=81 Identities=17% Similarity=0.232 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC---CceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg---a~~vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++...+. .+. .-+.+..+-....++.+.+.+... +++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999988888899 8999999887765543 332 112222222112333333443322 379
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999988763
No 168
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.74 E-value=0.011 Score=51.46 Aligned_cols=90 Identities=26% Similarity=0.392 Sum_probs=62.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
-.|.+|.|+|.|.+|...++.++.+|+ +|++.+++..........+.. . .++.+.+. ..|+|+.+
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~--------~~l~ell~-----~aDiv~~~ 98 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y--------VSLDELLA-----QADIVSLH 98 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E--------SSHHHHHH-----H-SEEEE-
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e--------eehhhhcc-----hhhhhhhh
Confidence 358999999999999999999999999 999999988876645555531 1 12332222 47899987
Q ss_pred CCCHH-----HHHHHHHHhccCCceEEEEcc
Q 017335 281 IGLTS-----VMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 281 ~g~~~-----~~~~~~~~l~~~~G~~v~~G~ 306 (373)
..... .=...+..++++ ..+|.++.
T Consensus 99 ~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hccccccceeeeeeeeeccccc-eEEEeccc
Confidence 76322 123567788886 88887764
No 169
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.73 E-value=0.0045 Score=55.58 Aligned_cols=101 Identities=19% Similarity=0.191 Sum_probs=68.4
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCc--eEEcCCCCCCccHHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGIT--DFINPATCGDKTVSQVI 266 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~--~vi~~~~~~~~~~~~~i 266 (373)
+.....++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++ +.|.+ +++..+. .+..
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~------~~~~ 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG------TQGW 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc------ccCC
Confidence 45667889999999999877 7777788887653 26999999988777664 34532 2232221 1100
Q ss_pred HHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 267 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
...+.||+|+-..........+.+.|+++ |+++..
T Consensus 142 --~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 --EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred --cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 01237999986554455567888999997 998764
No 170
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.73 E-value=0.013 Score=53.28 Aligned_cols=102 Identities=22% Similarity=0.288 Sum_probs=74.8
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHh
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~ 269 (373)
....++.||++|+=.|.|+ |.+++-+|+..|. .+|+..+..++..+.+++ +|....+.... .| +++.
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~D----v~~~ 158 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GD----VREG 158 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---cc----cccc
Confidence 3567899999999998887 8888889988775 599999999988877753 44332111111 22 2232
Q ss_pred cCC-CccEEE-ECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335 270 TDG-GADYCF-ECIGLTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 270 ~~~-~~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
..+ .+|.|| |-...-..++.+.+.|+++ |+++.+-
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~ 195 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYS 195 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEc
Confidence 233 799888 6666666899999999997 9999884
No 171
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.72 E-value=0.0084 Score=52.69 Aligned_cols=77 Identities=21% Similarity=0.228 Sum_probs=55.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC---CceEEcCCCCCCcc----HHHHHHHhcCCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---ITDFINPATCGDKT----VSQVIKEMTDGG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg---a~~vi~~~~~~~~~----~~~~i~~~~~~~ 273 (373)
-|.+|||+|+ +++|+..++-...+|= +||.+.|++++++.++..- ...|.|-.+ .+ +.+.+.+-.+ .
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P-~ 78 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYP-N 78 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCC-c
Confidence 3789999987 8999999998889997 9999999999999988643 234444444 33 3333322211 6
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
.++++++.|-
T Consensus 79 lNvliNNAGI 88 (245)
T COG3967 79 LNVLINNAGI 88 (245)
T ss_pred hheeeecccc
Confidence 7999998873
No 172
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.011 Score=55.00 Aligned_cols=78 Identities=14% Similarity=0.254 Sum_probs=55.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCCCccHHHHHHH---hcCCCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKE---MTDGGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~---~~~~~~d~ 276 (373)
.+++|||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|-.+ ..++.+.+.+ ...+.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence 4678999998 9999999998888999 99999999988887776665433 23322 1223222332 23347999
Q ss_pred EEECCC
Q 017335 277 CFECIG 282 (373)
Q Consensus 277 vid~~g 282 (373)
++++.|
T Consensus 80 li~~Ag 85 (277)
T PRK05993 80 LFNNGA 85 (277)
T ss_pred EEECCC
Confidence 999876
No 173
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0095 Score=55.23 Aligned_cols=77 Identities=19% Similarity=0.305 Sum_probs=54.7
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCCCccHHHHHHHhcC--CCccEEEE
Q 017335 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYCFE 279 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~~~d~vid 279 (373)
+++||+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|..+ ..++.+.+..... +++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899998 9999999999989999 99999999888777666555333 33333 1333333333322 37999999
Q ss_pred CCCC
Q 017335 280 CIGL 283 (373)
Q Consensus 280 ~~g~ 283 (373)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9883
No 174
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.011 Score=53.20 Aligned_cols=78 Identities=14% Similarity=0.178 Sum_probs=52.1
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCcc-HHHHHHHhcCCCccEEEECC
Q 017335 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT-VSQVIKEMTDGGADYCFECI 281 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~-~~~~i~~~~~~~~d~vid~~ 281 (373)
++|+|+|+ |++|...+..+...|+ +|+++++++++.+.+++++...++..+- .+.+ +.+.+..+..+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~d~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDM-NDPASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCC-CCHHHHHHHHHHhhcCCCCEEEEcC
Confidence 47899998 9999998888888899 9999999887776665554322322221 1133 33333333334799999877
Q ss_pred CC
Q 017335 282 GL 283 (373)
Q Consensus 282 g~ 283 (373)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 53
No 175
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.70 E-value=0.0032 Score=54.29 Aligned_cols=105 Identities=21% Similarity=0.228 Sum_probs=67.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcC-CCCC-------------CccHHHHHHH
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP-ATCG-------------DKTVSQVIKE 268 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~-~~~~-------------~~~~~~~i~~ 268 (373)
..+|+|+|+|.+|+.|+.+++.+|+ +|+..+...++.+..+..++..+... .... .......+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 4789999999999999999999999 99999999999988888776544221 1100 0112222222
Q ss_pred hcCCCccEEEEC-C--C--CHH-HHHHHHHHhccCCceEEEEcccCCC
Q 017335 269 MTDGGADYCFEC-I--G--LTS-VMNDAFNSSREGWGKTVILGVEMHG 310 (373)
Q Consensus 269 ~~~~~~d~vid~-~--g--~~~-~~~~~~~~l~~~~G~~v~~G~~~~~ 310 (373)
... .+|+||.+ . + .+. .....++.|+++ ..++++....++
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~gG 144 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQGG 144 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT-
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCCC
Confidence 211 57888842 2 1 111 245677889997 899999876554
No 176
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.67 E-value=0.034 Score=48.06 Aligned_cols=91 Identities=22% Similarity=0.332 Sum_probs=63.4
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC-
Q 017335 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL- 283 (373)
Q Consensus 206 VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~- 283 (373)
|+|+|+ |.+|...++.+...|. +|+++.|++++.+. ..+.+ ++..+- .+. +.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~---~d~-~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL---FDP-DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence 789998 9999999999999998 99999999998877 33443 333333 222 22333222 79999999984
Q ss_pred ---HHHHHHHHHHhccCCc--eEEEEcc
Q 017335 284 ---TSVMNDAFNSSREGWG--KTVILGV 306 (373)
Q Consensus 284 ---~~~~~~~~~~l~~~~G--~~v~~G~ 306 (373)
......+++.++.. | +++.++.
T Consensus 72 ~~~~~~~~~~~~a~~~~-~~~~~v~~s~ 98 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKA-GVKRVVYLSS 98 (183)
T ss_dssp TTHHHHHHHHHHHHHHT-TSSEEEEEEE
T ss_pred ccccccccccccccccc-ccccceeeec
Confidence 23355666666554 4 6776664
No 177
>PRK00811 spermidine synthase; Provisional
Probab=96.67 E-value=0.012 Score=55.24 Aligned_cols=96 Identities=19% Similarity=0.184 Sum_probs=65.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC------C--c---eEEcCCCCCCccHHHHHHHh
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG------I--T---DFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg------a--~---~vi~~~~~~~~~~~~~i~~~ 269 (373)
...++||++|+|. |..+..+++..+..+|.+++.+++-.+.+++.- . + +++. .+..+.+..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 4567999999877 777778888777779999999999888887621 1 1 1222 223333333
Q ss_pred cCCCccEEEECC-CC---------HHHHHHHHHHhccCCceEEEEc
Q 017335 270 TDGGADYCFECI-GL---------TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 270 ~~~~~d~vid~~-g~---------~~~~~~~~~~l~~~~G~~v~~G 305 (373)
..+.+|+|+-.. .. ...+..+.+.|+++ |.++...
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 344899999432 11 23467888999997 9988753
No 178
>PLN02366 spermidine synthase
Probab=96.63 E-value=0.026 Score=53.53 Aligned_cols=98 Identities=18% Similarity=0.213 Sum_probs=65.6
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC---------ceEEcCCCCCCccHHHHHHHh
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI---------TDFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga---------~~vi~~~~~~~~~~~~~i~~~ 269 (373)
....++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.+++. .. -+++. .|..+.+++.
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~------~Da~~~l~~~ 161 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI------GDGVEFLKNA 161 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE------ChHHHHHhhc
Confidence 35578999999876 66677888887766899999999877777763 11 01221 2333334433
Q ss_pred cCCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEc
Q 017335 270 TDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 270 ~~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
.++.+|+|| |... ....++.+.+.|+++ |.++.-+
T Consensus 162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 334799999 4332 123577899999997 9987654
No 179
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.62 E-value=0.022 Score=53.02 Aligned_cols=153 Identities=18% Similarity=0.126 Sum_probs=100.0
Q ss_pred HhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCC--------CCccHHHHHHH
Q 017335 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC--------GDKTVSQVIKE 268 (373)
Q Consensus 197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~--------~~~~~~~~i~~ 268 (373)
.+...++..+++.|.|..|+.++..++..|+ .|...+...++.+..+++|+...-..+++ -.++|..+-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3445677889999999999999999999999 89999989999988888887533222211 11244443333
Q ss_pred hc-CC--CccEEEECCC---C---HHHHHHHHHHhccCCceEEEEcccCCCC-ccccCHHHHhh-CcEEEEeecCCCC--
Q 017335 269 MT-DG--GADYCFECIG---L---TSVMNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEILK-GRSVCGTYFGGLK-- 335 (373)
Q Consensus 269 ~~-~~--~~d~vid~~g---~---~~~~~~~~~~l~~~~G~~v~~G~~~~~~-~~~~~~~~~~~-~~~i~g~~~~~~~-- 335 (373)
+. .. ++|+||-+.= . ..........+++| +.++++...++++ .+.-+-.-... +.+|+|...-..+
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a 315 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLA 315 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhh
Confidence 32 22 8999997632 2 12456788999997 9999998866654 22222222233 7899987421111
Q ss_pred ------chhHHHHHHHHHHcCC
Q 017335 336 ------PRSDIATLAQKYLDKV 351 (373)
Q Consensus 336 ------~~~~~~~~~~~~~~g~ 351 (373)
+..++-.+++++-+.+
T Consensus 316 ~~aS~LYa~Nl~~~l~ll~~~~ 337 (356)
T COG3288 316 AQASQLYATNLVNLLKLLCKKK 337 (356)
T ss_pred hhHHHHHHHHHHHHHHHHhccC
Confidence 2355666666665543
No 180
>PRK12742 oxidoreductase; Provisional
Probab=96.61 E-value=0.049 Score=49.01 Aligned_cols=100 Identities=21% Similarity=0.293 Sum_probs=62.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH-HHcCCceE-EcCCCCCCccHHHHHHHhcCCCccEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~-~~lga~~v-i~~~~~~~~~~~~~i~~~~~~~~d~v 277 (373)
.+++|||+|+ |++|...++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+ ...+.+.+.+ .+++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~--~~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK--SGALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH--hCCCcEE
Confidence 4789999998 9999999999999999 7877654 44444443 44565432 22222 1223333322 1369999
Q ss_pred EECCCCHH-------------------------HHHHHHHHhccCCceEEEEccc
Q 017335 278 FECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 278 id~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
|++.|... ....+.+.++.+ |+++.++..
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~ 133 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSV 133 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecc
Confidence 99877411 113344556676 899988763
No 181
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.61 E-value=0.021 Score=49.22 Aligned_cols=97 Identities=13% Similarity=0.181 Sum_probs=65.6
Q ss_pred hccchhhhhHHHHHHHHhCCCCCCEEEEECCCh-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335 181 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (373)
Q Consensus 181 a~l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~-vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~ 259 (373)
...|+...++...+.+...--.+.+|+|+|+|. +|..++..++..|+ +|+++.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 445544444444333333346889999999986 59999999999999 8888886521
Q ss_pred ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (373)
Q Consensus 260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 308 (373)
+..+.+ ..+|+||.+++.+..+.. +.++++ -.+++++.+.
T Consensus 80 -~l~~~l-----~~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 80 -NLKEHT-----KQADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred -hHHHHH-----hhCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 121111 168999999998764333 357776 8888888753
No 182
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.61 E-value=0.025 Score=55.11 Aligned_cols=96 Identities=15% Similarity=0.087 Sum_probs=68.8
Q ss_pred CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC---C-ceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---I-TDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg---a-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
.+|||+|+|.+|+.+++.+...|-.+|.+.+++.++.+.+.... . ...+|-.+ .+++.++.. ++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d------~~al~~li~-~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD------VDALVALIK-DFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC------hHHHHHHHh-cCCEEEE
Confidence 47999999999999999988888449999999999988886653 2 23454443 223333333 4599999
Q ss_pred CCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335 280 CIGLTSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
+.+.......+-.+++.+ =.+++....
T Consensus 75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 75 AAPPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 999877565555666665 667776554
No 183
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.037 Score=50.26 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=61.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh-HHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+.+ +..+.. ..+..+-...+++.+.+.+... +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4679999998 9999999998888999 8988887643 33222 222322 2222221111233333333222 3
Q ss_pred CccEEEECCCCH-------------------HHHHHHHHHhccCCceEEEEcc
Q 017335 273 GADYCFECIGLT-------------------SVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 273 ~~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
++|+++.+.+.. ..++.+.+.+..+ |+++.++.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 689999776532 2345555556665 88888865
No 184
>PRK06182 short chain dehydrogenase; Validated
Probab=96.59 E-value=0.012 Score=54.57 Aligned_cols=79 Identities=14% Similarity=0.259 Sum_probs=55.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCCCccHHHHHHHhc--CCCccEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~~~--~~~~d~v 277 (373)
.+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|-.+ .+++.+.+.+.. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 3678999998 9999999999888999 99999999888766655554322 23222 233333343332 2379999
Q ss_pred EECCCC
Q 017335 278 FECIGL 283 (373)
Q Consensus 278 id~~g~ 283 (373)
|++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 998873
No 185
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.03 Score=51.53 Aligned_cols=81 Identities=20% Similarity=0.259 Sum_probs=53.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
.++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++.. .++..+-...+++.+.+.+... +.+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999998 9999999999989999 999999988765554 344432 2222222112333333333222 37899
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
++.+.|.
T Consensus 84 lv~~ag~ 90 (261)
T PRK08265 84 LVNLACT 90 (261)
T ss_pred EEECCCC
Confidence 9998773
No 186
>PRK14967 putative methyltransferase; Provisional
Probab=96.55 E-value=0.045 Score=49.38 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=65.8
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhc
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~ 270 (373)
....++++++||-+|+|. |..+..+++. +..+|++++.+++..+.+++ .+.. .+++. ++.+. ..
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~------d~~~~---~~ 98 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG------DWARA---VE 98 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC------chhhh---cc
Confidence 445678899999999987 8888888875 55599999999988776543 3432 23322 23221 12
Q ss_pred CCCccEEEECCC---C------------------------HHHHHHHHHHhccCCceEEEEc
Q 017335 271 DGGADYCFECIG---L------------------------TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 271 ~~~~d~vid~~g---~------------------------~~~~~~~~~~l~~~~G~~v~~G 305 (373)
.+.||+|+...+ . ...+..+.+.|+++ |+++.+-
T Consensus 99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 238999996521 0 11355678899997 9988763
No 187
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.55 E-value=0.0023 Score=59.70 Aligned_cols=97 Identities=18% Similarity=0.282 Sum_probs=61.7
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI 266 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i 266 (373)
+.++.++++|++||-+|+|- |..+..+++..|+ +|++++.+++..+++++ .|.. .+... ++
T Consensus 54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~------D~---- 121 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ------DY---- 121 (273)
T ss_dssp HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-------G----
T ss_pred HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe------ec----
Confidence 56788999999999999974 6677788888899 99999999998888753 4521 22221 12
Q ss_pred HHhcCCCccEEEE-----CCCC---HHHHHHHHHHhccCCceEEEE
Q 017335 267 KEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 267 ~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+++. +.||.|+. .+|. +..+..+.+.|+|+ |+++.-
T Consensus 122 ~~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq 165 (273)
T PF02353_consen 122 RDLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQ 165 (273)
T ss_dssp GG----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEE
T ss_pred cccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 2222 27898874 4443 34688899999997 998744
No 188
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.014 Score=53.29 Aligned_cols=82 Identities=13% Similarity=0.173 Sum_probs=54.0
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cC-CceEEcCCCCCCccHHHHHHHhc--CC
Q 017335 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FG-ITDFINPATCGDKTVSQVIKEMT--DG 272 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lg-a~~vi~~~~~~~~~~~~~i~~~~--~~ 272 (373)
-.+++|+|+|+ |.+|..++..+...|+ +|+++.+++++.+.+.. .+ ..+++..+-....++.+.+.+.. .+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 35789999998 9999999999999999 89999998887655432 12 12233222211233433333322 23
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
.+|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 78999998883
No 189
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.54 E-value=0.037 Score=51.58 Aligned_cols=113 Identities=19% Similarity=0.282 Sum_probs=70.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce---EEcCCCCCCccHHHHHHHhc--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD---FINPATCGDKTVSQVIKEMT--D 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~---vi~~~~~~~~~~~~~i~~~~--~ 271 (373)
.+++|+|+|+ +++|.+.+.-.-..|+ +++.+.+..++++.+ ++.+..+ ++--+-...++..+.+.+.. -
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 5789999999 8999998887888898 777777777766665 3455433 22122111233333433322 2
Q ss_pred CCccEEEECCCCHH-------------------------HHHHHHHHhccCC-ceEEEEcccCCCCcccc
Q 017335 272 GGADYCFECIGLTS-------------------------VMNDAFNSSREGW-GKTVILGVEMHGSPISL 315 (373)
Q Consensus 272 ~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~G~~~~~~~~~~ 315 (373)
|++|+.++..|-.. ....++..|++.+ |+|+.++.-.+...+|+
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~ 159 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF 159 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence 48999999877421 2344566665544 99999987555444444
No 190
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.038 Score=50.08 Aligned_cols=81 Identities=19% Similarity=0.143 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+. ..+.. .++..+-...+++.+.+.+... ++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999999988999 8999998877655432 22322 2222222111222222222211 37
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 191
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.51 E-value=0.012 Score=54.72 Aligned_cols=104 Identities=15% Similarity=0.270 Sum_probs=75.2
Q ss_pred HHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHH
Q 017335 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVS 263 (373)
Q Consensus 191 ~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~ 263 (373)
+..+.+..+++||++||=+|+|- |.+++-+|+..|. +|++++.+++..+.+++ .|.. +++-.
T Consensus 61 ~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~--------- 129 (283)
T COG2230 61 LDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ--------- 129 (283)
T ss_pred HHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec---------
Confidence 34467889999999999999987 7788899999999 99999999998877754 5533 12111
Q ss_pred HHHHHhcCCCccEEEE-----CCCC---HHHHHHHHHHhccCCceEEEEcccC
Q 017335 264 QVIKEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVILGVEM 308 (373)
Q Consensus 264 ~~i~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~G~~~ 308 (373)
..+...+ .||-|+. .+|. +..+..+.+.|+++ |++++.....
T Consensus 130 -d~rd~~e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~ 179 (283)
T COG2230 130 -DYRDFEE-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITG 179 (283)
T ss_pred -ccccccc-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecC
Confidence 1122222 4777763 4554 34688899999997 9998776543
No 192
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.51 E-value=0.024 Score=50.11 Aligned_cols=81 Identities=22% Similarity=0.236 Sum_probs=59.1
Q ss_pred CCCEEEEECC--ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC-ceEEcCCC-CCCccHHHHHHHhcCCCccE
Q 017335 202 VGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI-TDFINPAT-CGDKTVSQVIKEMTDGGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~--G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga-~~vi~~~~-~~~~~~~~~i~~~~~~~~d~ 276 (373)
....|||+|+ |++|.+.+.=....|+ .|+++.|.-+....+. ++|. ..-+|-.+ +....+...+++.+.|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4568999986 8999998888888999 9999999999888776 6673 22333333 11123555666666778999
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
.++..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9997774
No 193
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.041 Score=52.84 Aligned_cols=79 Identities=20% Similarity=0.140 Sum_probs=53.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-E--EcCCCCCCccHHHHHHHhcC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-F--INPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-v--i~~~~~~~~~~~~~i~~~~~-- 271 (373)
.+.+|+|+|+ |++|..+++.+...|+ +|+++++++++.+.+. ..|.+. . .|-.+ .+++.+.+.....
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4679999998 9999999999999999 8999999887765442 345432 2 22222 1233333332221
Q ss_pred CCccEEEECCCC
Q 017335 272 GGADYCFECIGL 283 (373)
Q Consensus 272 ~~~d~vid~~g~ 283 (373)
+++|++|++.|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 379999998874
No 194
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.02 Score=51.76 Aligned_cols=77 Identities=17% Similarity=0.275 Sum_probs=52.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceE-EcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTDGGADYCF 278 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~v-i~~~~~~~~~~~~~i~~~~~~~~d~vi 278 (373)
.+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ .+...+ .|..+ .+..+.+.+. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence 4679999998 8999999999999999 89999998877765543 444322 23322 2222222222 23799999
Q ss_pred ECCCC
Q 017335 279 ECIGL 283 (373)
Q Consensus 279 d~~g~ 283 (373)
++.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
No 195
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.48 E-value=0.018 Score=50.60 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=62.8
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTDGGAD 275 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d 275 (373)
++++.+||-+|+|. |..++.+++.....+|++++.+++..+.++ +.+.+.+ .... .+..+ +. . .+.+|
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~-~~-~-~~~fD 114 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE-FG-Q-EEKFD 114 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh-CC-C-CCCcc
Confidence 55689999999876 666666666544339999999988776664 3454321 1111 12211 11 1 23799
Q ss_pred EEEEC-CC-CHHHHHHHHHHhccCCceEEEEc
Q 017335 276 YCFEC-IG-LTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 276 ~vid~-~g-~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
+|+-. .. -...+..+.+.|+++ |+++.+-
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 99953 22 234677889999997 9998773
No 196
>PRK04148 hypothetical protein; Provisional
Probab=96.48 E-value=0.018 Score=47.44 Aligned_cols=96 Identities=17% Similarity=0.200 Sum_probs=64.7
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (373)
Q Consensus 199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi 278 (373)
....+.+++++|.| .|...+..+..+|. +|+++|.+++..+.+++.+.+.+.+.-- +.++ .+ .+++|+|+
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~----y~~a~liy 82 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EI----YKNAKLIY 82 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HH----HhcCCEEE
Confidence 33456889999999 78766666667899 9999999999999898887654432211 1111 11 13799999
Q ss_pred ECCCCHHHHHHHHHHhccCCceEEEE
Q 017335 279 ECIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 279 d~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
..-..++....+++.-++-+..++..
T Consensus 83 sirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 83 SIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 98888885556666555531444444
No 197
>PRK08017 oxidoreductase; Provisional
Probab=96.45 E-value=0.013 Score=53.50 Aligned_cols=77 Identities=18% Similarity=0.291 Sum_probs=54.8
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceE-EcCCCCCCccH---HHHHHHhcCCCccEEE
Q 017335 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTV---SQVIKEMTDGGADYCF 278 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~v-i~~~~~~~~~~---~~~i~~~~~~~~d~vi 278 (373)
++|||+|+ |++|...++.+...|+ +|++++++.++.+.+++.+++.+ .|..+ ..++ .+.+.+...+.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence 57999998 9999999999999999 89999999988888777776443 22222 1222 2233333334789999
Q ss_pred ECCCC
Q 017335 279 ECIGL 283 (373)
Q Consensus 279 d~~g~ 283 (373)
.+.|.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 88763
No 198
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.45 E-value=0.044 Score=56.03 Aligned_cols=46 Identities=11% Similarity=-0.033 Sum_probs=39.4
Q ss_pred HhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335 197 VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (373)
Q Consensus 197 ~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~ 243 (373)
..+.+.|++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 445678999999998 9999999999988999 999999998876544
No 199
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.45 E-value=0.014 Score=51.70 Aligned_cols=98 Identities=16% Similarity=0.238 Sum_probs=63.2
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc----CCceEEcCCCCCCccHHHHHHHhc
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l----ga~~vi~~~~~~~~~~~~~i~~~~ 270 (373)
.+.....++.+||-+|+|. |..+..+++. |. +|+++|.+++..+.+++. +...+ +... .++ .+..
T Consensus 23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~----~~~~ 91 (197)
T PRK11207 23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDL----NNLT 91 (197)
T ss_pred HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cCh----hhCC
Confidence 3444566788999999987 7777888875 77 999999999877666542 22211 1111 122 1221
Q ss_pred -CCCccEEEECCC----C----HHHHHHHHHHhccCCceEEEE
Q 017335 271 -DGGADYCFECIG----L----TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 271 -~~~~d~vid~~g----~----~~~~~~~~~~l~~~~G~~v~~ 304 (373)
++.+|+|+.... . ...+..+.+.|+++ |.++.+
T Consensus 92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~ 133 (197)
T PRK11207 92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV 133 (197)
T ss_pred cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence 237999996533 1 24577888899997 996544
No 200
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.45 E-value=0.011 Score=55.14 Aligned_cols=99 Identities=17% Similarity=0.191 Sum_probs=72.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce--EEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
...|.|+|+|.+|.-++.+|..+|+ +|..++.+.+|++.+..+-..+ .+-+.. .++.+.+. ++|++|.+
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~---~~iee~v~-----~aDlvIga 238 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTP---SNIEEAVK-----KADLVIGA 238 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCH---HHHHHHhh-----hccEEEEE
Confidence 4467888999999999999999999 9999999999999998744333 222221 33333332 68888875
Q ss_pred CC--C----HHHHHHHHHHhccCCceEEEEcccCCCC
Q 017335 281 IG--L----TSVMNDAFNSSREGWGKTVILGVEMHGS 311 (373)
Q Consensus 281 ~g--~----~~~~~~~~~~l~~~~G~~v~~G~~~~~~ 311 (373)
+= + ....++..+.|++| +.++++...+++-
T Consensus 239 VLIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqGGc 274 (371)
T COG0686 239 VLIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQGGC 274 (371)
T ss_pred EEecCCCCceehhHHHHHhcCCC-cEEEEEEEcCCCc
Confidence 32 1 22567889999997 9999999876653
No 201
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.44 E-value=0.052 Score=49.18 Aligned_cols=81 Identities=16% Similarity=0.156 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC--C-ceEEcCCCCCCccHHHHHHHhc--CCCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG--I-TDFINPATCGDKTVSQVIKEMT--DGGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg--a-~~vi~~~~~~~~~~~~~i~~~~--~~~~ 274 (373)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+. . .+++..+-....++...+.+.. .+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999998 9999999988888899 8999999987765543 222 1 1122222211233333333321 1378
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|+||.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999998874
No 202
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.05 Score=48.82 Aligned_cols=80 Identities=18% Similarity=0.162 Sum_probs=50.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITDFINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~----~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
+++++||+|+ |.+|..+++.+...|+ +|++++++.++... ++..+.. ++..+-....++.+.+.+... +++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALR-IGGIDLVDPQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCce-EEEeecCCHHHHHHHHHHHHHHhCCc
Confidence 3789999998 9999999998888899 89999997765332 2223332 222221111233333333222 379
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|+|+.+.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998763
No 203
>PRK00536 speE spermidine synthase; Provisional
Probab=96.41 E-value=0.014 Score=54.02 Aligned_cols=99 Identities=9% Similarity=-0.077 Sum_probs=68.0
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC-ceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI-TDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi 278 (373)
...++|||+|+|- |.++-+++|+-. +|..++.+++-.+..++ +.. ...++... -++...+.+...+.+|+||
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence 4568999998865 667778888863 99999999998888887 321 01121111 1222223333334899998
Q ss_pred -ECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335 279 -ECIGLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 279 -d~~g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
|++-.+.....+.++|+++ |.++.-+.
T Consensus 145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred EcCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence 7777777788999999997 99887643
No 204
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.018 Score=52.76 Aligned_cols=87 Identities=17% Similarity=0.174 Sum_probs=55.9
Q ss_pred HhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCc--eEEcCCCCCCccHHHHHHHhcC-
Q 017335 197 VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT--DFINPATCGDKTVSQVIKEMTD- 271 (373)
Q Consensus 197 ~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~--~vi~~~~~~~~~~~~~i~~~~~- 271 (373)
....-++.++||+|+ |.+|...++.+...|+ +|+.++++++..+.+.+. ... .++..+-....++.+.+.+..+
T Consensus 5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (264)
T PRK12829 5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER 83 (264)
T ss_pred HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 344457899999998 9999999999999999 899999987766655432 211 2222222111222222332211
Q ss_pred -CCccEEEECCCCH
Q 017335 272 -GGADYCFECIGLT 284 (373)
Q Consensus 272 -~~~d~vid~~g~~ 284 (373)
+++|+||.+.|..
T Consensus 84 ~~~~d~vi~~ag~~ 97 (264)
T PRK12829 84 FGGLDVLVNNAGIA 97 (264)
T ss_pred hCCCCEEEECCCCC
Confidence 3799999988753
No 205
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.40 E-value=0.077 Score=46.76 Aligned_cols=104 Identities=17% Similarity=0.330 Sum_probs=65.6
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK 267 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~ 267 (373)
+.....++++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++.. +++..+ ..+.+.
T Consensus 32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d------~~~~~~ 104 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGS------APECLA 104 (196)
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECc------hHHHHh
Confidence 34556778999999998865 5566667766533399999999988777653 4543 233322 222222
Q ss_pred HhcCCCccE-EEECCCC-HHHHHHHHHHhccCCceEEEEcc
Q 017335 268 EMTDGGADY-CFECIGL-TSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 268 ~~~~~~~d~-vid~~g~-~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
.+. ..+|. +++.... ...++.+.+.|++| |+++....
T Consensus 105 ~~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 105 QLA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred hCC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 222 23444 4443322 35688999999997 99887743
No 206
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.019 Score=52.61 Aligned_cols=79 Identities=23% Similarity=0.358 Sum_probs=52.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceE-EcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
.+++|||+|+ |++|...++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ ..++.+.+.+... +++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4789999998 9999999999999999 999999887765544 34443222 23222 1223233332221 37899
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
++.+.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9988763
No 207
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.39 E-value=0.026 Score=55.85 Aligned_cols=99 Identities=11% Similarity=0.054 Sum_probs=64.0
Q ss_pred hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (373)
Q Consensus 198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~ 276 (373)
.+--.+.+|||+|+|.+|.+++..+...|+.+++++.++.++.+.+. +++...++ .+ +.+.+.. ..+|+
T Consensus 176 ~~~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~--------~~-~~l~~~l-~~aDi 245 (414)
T PRK13940 176 LDNISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAH--------YL-SELPQLI-KKADI 245 (414)
T ss_pred hcCccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEe--------cH-HHHHHHh-ccCCE
Confidence 33346789999999999999999999999879999999988766654 45421222 12 1222221 26999
Q ss_pred EEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335 277 CFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 277 vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
||+|++.+..+-. .+.++...=.+++++.+
T Consensus 246 VI~aT~a~~~vi~-~~~~~~~~~~~iDLavP 275 (414)
T PRK13940 246 IIAAVNVLEYIVT-CKYVGDKPRVFIDISIP 275 (414)
T ss_pred EEECcCCCCeeEC-HHHhCCCCeEEEEeCCC
Confidence 9999998762211 12222210246777764
No 208
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.39 E-value=0.02 Score=58.12 Aligned_cols=74 Identities=19% Similarity=0.244 Sum_probs=55.9
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
+.++++|+|+|.|..|++++.+++..|+ +|++.|..+++.+.+++.|+.. +.... ..+.+ ..+|+|+.
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l-----~~~D~VV~ 76 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQI-----ADYALVVT 76 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHh-----hcCCEEEE
Confidence 5578999999999999999999999999 9999998777666677778743 32221 11112 25799999
Q ss_pred CCCCHH
Q 017335 280 CIGLTS 285 (373)
Q Consensus 280 ~~g~~~ 285 (373)
+.|.+.
T Consensus 77 SpGi~~ 82 (488)
T PRK03369 77 SPGFRP 82 (488)
T ss_pred CCCCCC
Confidence 998654
No 209
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.017 Score=55.48 Aligned_cols=80 Identities=20% Similarity=0.308 Sum_probs=53.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-EEcCCCCCCcc-HHHHHHHhc--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKT-VSQVIKEMT--DG 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-vi~~~~~~~~~-~~~~i~~~~--~~ 272 (373)
.+++|||+|+ |++|.+.++.+...|+ +|+.+++++++++.+ ++.|.+. ++..+- .+.+ +.+.+.+.. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv-~d~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDV-TDADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHHhcC
Confidence 4689999998 8999999999999999 899999998876544 3345432 222121 1122 222222221 24
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 210
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.31 E-value=0.051 Score=54.37 Aligned_cols=78 Identities=19% Similarity=0.383 Sum_probs=50.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hHHHH-HHHcCCceE-EcCCCCCCccHHHHHHHhc--CCCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEI-GKKFGITDF-INPATCGDKTVSQVIKEMT--DGGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~-~~~lga~~v-i~~~~~~~~~~~~~i~~~~--~~~~ 274 (373)
+++++||+|+ |++|...++.+...|+ +|+++++.+ ++.+. .++++...+ +|-.+ ..+..+.+.... .+++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCCC
Confidence 5789999998 9999999999999999 899888743 22222 334554322 33333 122222222222 2368
Q ss_pred cEEEECCC
Q 017335 275 DYCFECIG 282 (373)
Q Consensus 275 d~vid~~g 282 (373)
|++|.+.|
T Consensus 286 d~vi~~AG 293 (450)
T PRK08261 286 DIVVHNAG 293 (450)
T ss_pred CEEEECCC
Confidence 99999988
No 211
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=96.26 E-value=0.0099 Score=54.46 Aligned_cols=106 Identities=16% Similarity=0.228 Sum_probs=66.8
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCce-E-EcCCCCCCccHHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITD-F-INPATCGDKTVSQVI 266 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~-v-i~~~~~~~~~~~~~i 266 (373)
+.-..+++||++|+=.|.|+ |.++..+++..|. .+|+..+.++++.+.++ .+|... | +..++.....+
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~---- 106 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGF---- 106 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG------
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccc----
Confidence 45568999999999998876 7777778877662 39999999999888775 355432 1 22222001111
Q ss_pred HHhcCCCccEEE-ECCCCHHHHHHHHHHh-ccCCceEEEEc
Q 017335 267 KEMTDGGADYCF-ECIGLTSVMNDAFNSS-REGWGKTVILG 305 (373)
Q Consensus 267 ~~~~~~~~d~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~G 305 (373)
.+-.+..+|.|| |-..--..+..+.+.| ++| |+++.+.
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fs 146 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFS 146 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEE
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEEC
Confidence 011123789888 6655555799999999 897 9999884
No 212
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.26 E-value=0.04 Score=51.41 Aligned_cols=93 Identities=15% Similarity=-0.002 Sum_probs=62.0
Q ss_pred hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADY 276 (373)
Q Consensus 198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~ 276 (373)
.+...+++|+|+|+|+.+.+++..++.+|+.+|.++.|+.++.+.+.+ ++.. +...+ ....+|+
T Consensus 117 ~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~---~~~~~dl 181 (272)
T PRK12550 117 YQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDL---GGIEADI 181 (272)
T ss_pred cCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhc---ccccCCE
Confidence 344556799999999999999999999999789999999988776643 3311 10011 1126899
Q ss_pred EEECCCCHHH-------HHHHHHHhccCCceEEEEcc
Q 017335 277 CFECIGLTSV-------MNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 277 vid~~g~~~~-------~~~~~~~l~~~~G~~v~~G~ 306 (373)
|++|+..... .......+++. ..++++-.
T Consensus 182 vINaTp~Gm~~~~~~~~~pi~~~~l~~~-~~v~D~vY 217 (272)
T PRK12550 182 LVNVTPIGMAGGPEADKLAFPEAEIDAA-SVVFDVVA 217 (272)
T ss_pred EEECCccccCCCCccccCCCCHHHcCCC-CEEEEeec
Confidence 9999863220 01123456775 77777744
No 213
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.25 E-value=0.026 Score=51.87 Aligned_cols=81 Identities=19% Similarity=0.243 Sum_probs=53.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
.++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ ++.. .++..+-....++...+.+... +.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4689999998 8999999999999999 89999999887766543 3321 2222221111233333333322 37899
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
++++.|.
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9998873
No 214
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.25 E-value=0.038 Score=52.46 Aligned_cols=91 Identities=21% Similarity=0.405 Sum_probs=63.1
Q ss_pred CEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335 204 STVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (373)
Q Consensus 204 ~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 282 (373)
.+|.|+|.|.+|...+..++..|. .+|+++++++++.+.+++.|....+. .+..+.+ ..+|+||.|+.
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence 579999999999999998888884 38999999999888888887532211 1111111 26899999998
Q ss_pred CHHH---HHHHHHHhccCCceEEEEcc
Q 017335 283 LTSV---MNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 283 ~~~~---~~~~~~~l~~~~G~~v~~G~ 306 (373)
.... +..+...++++ ..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 6542 33344456675 66776654
No 215
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.027 Score=52.05 Aligned_cols=80 Identities=19% Similarity=0.189 Sum_probs=52.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi 278 (373)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. .++..+++..+-...+++.+.+..... +++|+++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999998 9999999988888899 8999999888776543 344222322222112333333333322 3799999
Q ss_pred ECCCC
Q 017335 279 ECIGL 283 (373)
Q Consensus 279 d~~g~ 283 (373)
++.|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 98873
No 216
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.24 E-value=0.04 Score=48.98 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=32.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~ 236 (373)
.+.+|+|+|.|++|..+++.+..+|+.++..+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999899999976
No 217
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.22 E-value=0.06 Score=49.01 Aligned_cols=105 Identities=17% Similarity=0.332 Sum_probs=76.3
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce--EEcCCCCCCccHHHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIK 267 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--vi~~~~~~~~~~~~~i~ 267 (373)
+......++|++||=+|+|. |-.+..+++..|-.+|+++|.++.-++.+++ .|... .+..+ ..
T Consensus 43 ~i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~d----------Ae 111 (238)
T COG2226 43 LISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGD----------AE 111 (238)
T ss_pred HHHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEec----------hh
Confidence 34445667999999998877 8999999999986699999999998888864 22221 11111 12
Q ss_pred Hh-cCC-CccEEEECCCC------HHHHHHHHHHhccCCceEEEEcccCCC
Q 017335 268 EM-TDG-GADYCFECIGL------TSVMNDAFNSSREGWGKTVILGVEMHG 310 (373)
Q Consensus 268 ~~-~~~-~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~~~~~ 310 (373)
++ .++ .||+|..+.|- +..+.++.+.|+|+ |+++.+......
T Consensus 112 ~LPf~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p~ 161 (238)
T COG2226 112 NLPFPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKPD 161 (238)
T ss_pred hCCCCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCCC
Confidence 22 233 89999877663 44688999999997 999988875543
No 218
>PRK01581 speE spermidine synthase; Validated
Probab=96.21 E-value=0.068 Score=51.60 Aligned_cols=98 Identities=15% Similarity=0.133 Sum_probs=65.4
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC--------C---c--eEEcCCCCCCccHHHHH
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--------I---T--DFINPATCGDKTVSQVI 266 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg--------a---~--~vi~~~~~~~~~~~~~i 266 (373)
.....+|||+|+|. |.++..+++..+..+|++++.+++-.+.++++. + . +++. .|..+.+
T Consensus 148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi------~Da~~fL 220 (374)
T PRK01581 148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV------CDAKEFL 220 (374)
T ss_pred CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE------CcHHHHH
Confidence 34457999999764 667788888766669999999999888888621 0 0 1111 2233333
Q ss_pred HHhcCCCccEEE-ECCCC----------HHHHHHHHHHhccCCceEEEEcc
Q 017335 267 KEMTDGGADYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 267 ~~~~~~~~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
.. ..+.+|+|| |.... ...+..+.+.|+++ |.++....
T Consensus 221 ~~-~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 221 SS-PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred Hh-cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 32 334899999 43221 22577889999997 99877643
No 219
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=96.21 E-value=0.13 Score=48.37 Aligned_cols=116 Identities=22% Similarity=0.226 Sum_probs=75.6
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEc--CChhHHHHHHHcCCceEEcCCCCC-Cc----------
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDFINPATCG-DK---------- 260 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~--~~~~~~~~~~~lga~~vi~~~~~~-~~---------- 260 (373)
+.+...++||++|+=--+|.+|.+.+.+++.+|++-+++.. .+.+|++.++.+||.-++.+.... ..
T Consensus 53 Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~ 132 (300)
T COG0031 53 AEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELA 132 (300)
T ss_pred HHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHH
Confidence 34566699999655444599999999999999994444443 266889999999998776665210 00
Q ss_pred ------------------------cHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCC
Q 017335 261 ------------------------TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH 309 (373)
Q Consensus 261 ------------------------~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~ 309 (373)
....++.+.+++.+|.++-.+|..-++.-.-+.|+..+..+-.++..+.
T Consensus 133 ~~~p~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv~vdP~ 205 (300)
T COG0031 133 AEIPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVAVDPE 205 (300)
T ss_pred HhCCCceEchhhcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEEEECCC
Confidence 0122333333445888888888777777777777664343444554343
No 220
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=96.19 E-value=0.036 Score=49.73 Aligned_cols=103 Identities=17% Similarity=0.234 Sum_probs=64.8
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEE------cC-CCCCCcc-HHHHHHHh
Q 017335 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI------NP-ATCGDKT-VSQVIKEM 269 (373)
Q Consensus 199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi------~~-~~~~~~~-~~~~i~~~ 269 (373)
.+.++.+||+.|+|. |.-++.+|. .|. .|++++.++...+.+. +.+..... .. .. ..-+ +...+.++
T Consensus 31 ~~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~ 106 (213)
T TIGR03840 31 GLPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRA-GNIEIFCGDFFAL 106 (213)
T ss_pred CCCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeec-CceEEEEccCCCC
Confidence 346778999999987 888888875 799 9999999998887753 23321000 00 00 0000 11111111
Q ss_pred c---CCCccEEEECCCC--------HHHHHHHHHHhccCCceEEEEcc
Q 017335 270 T---DGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 270 ~---~~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
. .+.+|.|+|+..- ...+..+.++|++| |++++.+.
T Consensus 107 ~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 107 TAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred CcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1 1368999997541 33578899999997 98777765
No 221
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.19 E-value=0.056 Score=50.76 Aligned_cols=95 Identities=14% Similarity=0.064 Sum_probs=61.4
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cC----CceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG----ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lg----a~~vi~~~~~~~~~~~~~i~~~~~~~~d 275 (373)
..+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+.+ ++ ...+... .++.+.+ ..+|
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~-----~~aD 194 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG-----SDLAAAL-----AAAD 194 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec-----cchHhhh-----CCCC
Confidence 356899999999999999999999999899999999888776543 32 1122211 1111111 2689
Q ss_pred EEEECCCCHH----HHHHHHHHhccCCceEEEEcc
Q 017335 276 YCFECIGLTS----VMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 276 ~vid~~g~~~----~~~~~~~~l~~~~G~~v~~G~ 306 (373)
+||+|+.... ........++++ ..++++-.
T Consensus 195 iVInaTp~Gm~~~~~~~~~~~~l~~~-~~v~DivY 228 (284)
T PRK12549 195 GLVHATPTGMAKHPGLPLPAELLRPG-LWVADIVY 228 (284)
T ss_pred EEEECCcCCCCCCCCCCCCHHHcCCC-cEEEEeee
Confidence 9999965321 001122457775 77777744
No 222
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.064 Score=49.16 Aligned_cols=77 Identities=17% Similarity=0.187 Sum_probs=51.9
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cC-C-ceE--EcCCCCCCccHHHHHHHhc---CCCc
Q 017335 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-I-TDF--INPATCGDKTVSQVIKEMT---DGGA 274 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lg-a-~~v--i~~~~~~~~~~~~~i~~~~---~~~~ 274 (373)
+++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+ . .++ .|-.+ ..++.+.+.+.. .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47999998 9999999998888999 99999998887766543 22 1 122 23222 123333333321 3479
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999998874
No 223
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.17 E-value=0.11 Score=48.41 Aligned_cols=104 Identities=12% Similarity=0.196 Sum_probs=64.7
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCChh---HHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~~---~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|+ +++|+++++.+...|+ +|+.++++++ +.+.+ ++++....+..+-...+++.+.+.+... +
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999987 4899999998888999 8998888753 22322 3345333322222112333333333322 4
Q ss_pred CccEEEECCCCH--------------H---------------HHHHHHHHhccCCceEEEEccc
Q 017335 273 GADYCFECIGLT--------------S---------------VMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 273 ~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
.+|+++++.|.. . ....++..++.+ |+++.++..
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 799999988731 0 234456667786 999888653
No 224
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.16 E-value=0.014 Score=54.54 Aligned_cols=96 Identities=20% Similarity=0.138 Sum_probs=63.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCccHHHHHHHhcCC-CccEE
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDG-GADYC 277 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~~~~~~i~~~~~~-~~d~v 277 (373)
.++++++|+|+|+.+.+++..+...|+++|+++.|+.+|.+.+.+ ++... .+.... ..++... .+|++
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~---------~~~~~~~~~~dli 194 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA---------LADLEGLEEADLL 194 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc---------ccccccccccCEE
Confidence 358999999999999999999999998899999999999777754 33211 000000 0111111 48999
Q ss_pred EECCCCHHHHH-----HHHHHhccCCceEEEEcc
Q 017335 278 FECIGLTSVMN-----DAFNSSREGWGKTVILGV 306 (373)
Q Consensus 278 id~~g~~~~~~-----~~~~~l~~~~G~~v~~G~ 306 (373)
||+++....-. .....+++. -.++++-.
T Consensus 195 INaTp~Gm~~~~~~~~~~~~~l~~~-~~v~D~vY 227 (283)
T COG0169 195 INATPVGMAGPEGDSPVPAELLPKG-AIVYDVVY 227 (283)
T ss_pred EECCCCCCCCCCCCCCCcHHhcCcC-CEEEEecc
Confidence 99987433111 014567775 66666643
No 225
>PRK04457 spermidine synthase; Provisional
Probab=96.16 E-value=0.065 Score=49.70 Aligned_cols=94 Identities=16% Similarity=0.222 Sum_probs=66.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CC----c--eEEcCCCCCCccHHHHHHHhcCCC
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI----T--DFINPATCGDKTVSQVIKEMTDGG 273 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga----~--~vi~~~~~~~~~~~~~i~~~~~~~ 273 (373)
.++.+||++|.|+ |..+..+++.....+|++++.+++-.+.+++. +. . +++.. +..+.+... ++.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~------Da~~~l~~~-~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA------DGAEYIAVH-RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC------CHHHHHHhC-CCC
Confidence 4567899999987 77888888877544999999999999888763 31 1 23322 333334332 347
Q ss_pred ccEEE-ECCCC---------HHHHHHHHHHhccCCceEEE
Q 017335 274 ADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVI 303 (373)
Q Consensus 274 ~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~ 303 (373)
+|+|+ |.... ...++.+.+.|+++ |+++.
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 99998 54221 35688999999997 99876
No 226
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.031 Score=51.48 Aligned_cols=80 Identities=11% Similarity=0.156 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+.. +++..+-....++.+.+.+... ++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 8999999999988999 99999998876554422 2321 2222222111223233333221 37
Q ss_pred ccEEEECCC
Q 017335 274 ADYCFECIG 282 (373)
Q Consensus 274 ~d~vid~~g 282 (373)
+|++|++.|
T Consensus 88 id~vi~~Ag 96 (263)
T PRK07814 88 LDIVVNNVG 96 (263)
T ss_pred CCEEEECCC
Confidence 999999877
No 227
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.03 Score=52.69 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=54.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCC--ce-E--EcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--TD-F--INPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga--~~-v--i~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +.++. .. . .|-.+ ..++.+.+.+... +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 899999998876654 34542 11 1 22222 1233333333222 3
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
.+|++|++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 228
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.15 E-value=0.061 Score=51.52 Aligned_cols=103 Identities=16% Similarity=0.097 Sum_probs=69.8
Q ss_pred CCCCCEEEEECCChHHHHHHHHH-HHCCCCeEEEEcCChhHHHHHHH-----cCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVDINPEKFEIGKK-----FGITDFINPATCGDKTVSQVIKEMTDGG 273 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la-~~~G~~~Vi~~~~~~~~~~~~~~-----lga~~vi~~~~~~~~~~~~~i~~~~~~~ 273 (373)
-+...+++|+|+|..|...+..+ ...++++|.+.++++++.+.+.+ ++.. +... .+..+.+ ..
T Consensus 124 ~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~-----~~~~~~~-----~~ 192 (325)
T PRK08618 124 REDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV-----NSADEAI-----EE 192 (325)
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe-----CCHHHHH-----hc
Confidence 34567899999999998776554 46788899999999888765432 3432 1111 1232222 26
Q ss_pred ccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCH
Q 017335 274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 317 (373)
Q Consensus 274 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~ 317 (373)
+|+|+.|+++.. .... ..+++| -.++.+|.+..+ ..+++.
T Consensus 193 aDiVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~p~-~~E~~~ 232 (325)
T PRK08618 193 ADIIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFMPD-MQELPS 232 (325)
T ss_pred CCEEEEccCCCC-cchH-HhcCCC-cEEEecCCCCcc-cccCCH
Confidence 899999998776 3334 889997 899999986542 335555
No 229
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.15 E-value=0.096 Score=46.51 Aligned_cols=82 Identities=32% Similarity=0.391 Sum_probs=55.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
-.|.+|+|+|.|.+|..+++.+...|+ +|+++++++++.+.+++ +|+. .++.++ +....+|+++-
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~------------l~~~~~Dv~vp 91 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE------------IYSVDADVFAP 91 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh------------hccccCCEEEe
Confidence 357899999999999999999999999 99999999888776654 4653 333221 11115888885
Q ss_pred CCCCHHHHHHHHHHhcc
Q 017335 280 CIGLTSVMNDAFNSSRE 296 (373)
Q Consensus 280 ~~g~~~~~~~~~~~l~~ 296 (373)
|......-...++.++.
T Consensus 92 ~A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 92 CALGGVINDDTIPQLKA 108 (200)
T ss_pred cccccccCHHHHHHcCC
Confidence 54333323344455543
No 230
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.084 Score=48.25 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=51.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cCCc-eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
.+.++||+|+ |++|...++.+...|+ +|+.+++++++.+..+. .+.. +.+..+-...+++...+.+... +++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999998 8999998888888999 88888888876644433 2322 2222222111223333333322 378
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999883
No 231
>PRK09186 flagellin modification protein A; Provisional
Probab=96.11 E-value=0.088 Score=47.95 Aligned_cols=80 Identities=18% Similarity=0.311 Sum_probs=51.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHc----CCc--eEEcCCCCCCccHHHHHHHhcC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF----GIT--DFINPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~l----ga~--~vi~~~~~~~~~~~~~i~~~~~-- 271 (373)
.+++|||+|+ |.+|...+..+...|+ +|+++.+++++.+.+ +++ +.. .++..+-..+.++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4789999998 8999999999999999 899999888776544 222 221 1222222112333333333322
Q ss_pred CCccEEEECCC
Q 017335 272 GGADYCFECIG 282 (373)
Q Consensus 272 ~~~d~vid~~g 282 (373)
+++|+++.+.+
T Consensus 82 ~~id~vi~~A~ 92 (256)
T PRK09186 82 GKIDGAVNCAY 92 (256)
T ss_pred CCccEEEECCc
Confidence 36899998875
No 232
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.036 Score=52.14 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT--DGG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~--~~~ 273 (373)
.+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+.+ +++..+-...+++.+.+.... .+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888899 99999999877655432 2322 222222211123333333221 237
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++++.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 233
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.10 E-value=0.11 Score=47.18 Aligned_cols=92 Identities=22% Similarity=0.207 Sum_probs=61.5
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCC--eEEEEcCC----hhH--------HHHHHHcCCceEEcCCCCCCccHHHHH
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRAS--KIIGVDIN----PEK--------FEIGKKFGITDFINPATCGDKTVSQVI 266 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~--~Vi~~~~~----~~~--------~~~~~~lga~~vi~~~~~~~~~~~~~i 266 (373)
-.+.+|+|+|+|+.|..++..+...|++ +|+.++++ .++ .++++.++... . . .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 4567999999999999999999999997 89999998 443 23344443211 0 0 1233333
Q ss_pred HHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEc
Q 017335 267 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 267 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
.++|++|++++....-...++.+.++ ..++.+.
T Consensus 96 -----~~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 -----KGADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred -----hcCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 25899999997433224666777775 6666554
No 234
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.09 E-value=0.055 Score=50.61 Aligned_cols=95 Identities=17% Similarity=0.244 Sum_probs=67.3
Q ss_pred ccchhhhhHHHHHHHHhCC-CCCCEEEEECCCh-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335 182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (373)
Q Consensus 182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~G~-vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~ 259 (373)
.+||+....+. +++..++ -.|++|+|+|.|. +|.-++.++...|+ +|+.+.+..
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------- 192 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------- 192 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence 45555444444 3444443 4799999999965 99999999999999 888877532
Q ss_pred ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (373)
Q Consensus 260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 308 (373)
.++.+.+ ..+|+||.++|.+..+.. +.++++ ..++++|...
T Consensus 193 ~~l~~~~-----~~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 193 KDMASYL-----KDADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hhHHHHH-----hhCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 1221111 168999999999875554 468997 9999999853
No 235
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.08 E-value=0.025 Score=53.10 Aligned_cols=76 Identities=12% Similarity=0.016 Sum_probs=52.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
.+.+|+|+|+|+.+.+++..+..+|+++|+++.|+.+|.+.+.+ ++... +... +..+.+.... ..+|+||+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~------~~~~~~~~~~-~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRL------EGDSGGLAIE-KAAEVLVS 196 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceec------cchhhhhhcc-cCCCEEEE
Confidence 57899999999999999999999999899999999888776643 33211 1100 0001111111 26899999
Q ss_pred CCCCH
Q 017335 280 CIGLT 284 (373)
Q Consensus 280 ~~g~~ 284 (373)
|++..
T Consensus 197 aTp~g 201 (282)
T TIGR01809 197 TVPAD 201 (282)
T ss_pred CCCCC
Confidence 98854
No 236
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.08 E-value=0.032 Score=51.30 Aligned_cols=80 Identities=14% Similarity=0.122 Sum_probs=52.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
.+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+++. +.. +.+..+-....+..+.+.+... +.+|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999998 8999999999989999 999999988777666543 321 1221111011223333333322 37899
Q ss_pred EEECCC
Q 017335 277 CFECIG 282 (373)
Q Consensus 277 vid~~g 282 (373)
++++.|
T Consensus 83 li~~Ag 88 (262)
T TIGR03325 83 LIPNAG 88 (262)
T ss_pred EEECCC
Confidence 999876
No 237
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.036 Score=50.66 Aligned_cols=81 Identities=19% Similarity=0.165 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+ .+.. ..+..+-....++.+.+.+... +.
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999998 8999999999999999 89999998877655432 2322 1222221112333333333221 37
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++.+.|.
T Consensus 87 id~lv~~ag~ 96 (253)
T PRK05867 87 IDIAVCNAGI 96 (253)
T ss_pred CCEEEECCCC
Confidence 9999998773
No 238
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.05 E-value=0.033 Score=50.86 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=51.4
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-ceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~~vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+. .+.+..+-..+.++.+.+.+... +.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999998 8999999999999999 99999998876554432 222 22332222112333333333322 368
Q ss_pred cEEEECCC
Q 017335 275 DYCFECIG 282 (373)
Q Consensus 275 d~vid~~g 282 (373)
|+++++.|
T Consensus 80 d~lI~~ag 87 (252)
T PRK07677 80 DALINNAA 87 (252)
T ss_pred cEEEECCC
Confidence 99999887
No 239
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.05 E-value=0.18 Score=44.88 Aligned_cols=92 Identities=12% Similarity=-0.020 Sum_probs=56.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
.+.+|||+|+|.+|...+..+...|+ +|++++.... ....+...+.- .+..+. +.+. .+ .++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i-~~~~~~-----~~~~--~l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKI-RWKQKE-----FEPS--DI--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCE-EEEecC-----CChh--hc--CCceEEEEc
Confidence 57899999999999999988888998 8888875432 21222222211 122221 1100 01 278999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 017335 281 IGLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
++.+. ++..+...+.. +.++....
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence 99988 56555545454 55665543
No 240
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=96.04 E-value=0.077 Score=49.63 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=67.5
Q ss_pred CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc-CCce-EE-cCCCC-CCccHHHHHHHhcCCCccEEE-
Q 017335 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITD-FI-NPATC-GDKTVSQVIKEMTDGGADYCF- 278 (373)
Q Consensus 204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l-ga~~-vi-~~~~~-~~~~~~~~i~~~~~~~~d~vi- 278 (373)
++|||+|+|. |-.+-.++|+....++++++.+++=.+.+++. +-.+ .. |++-. ...|-.+-+++... ++|+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 5999998765 66677888988888999999999998888863 2111 00 11110 00233344444333 899999
Q ss_pred ECCCC---------HHHHHHHHHHhccCCceEEEEc
Q 017335 279 ECIGL---------TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 279 d~~g~---------~~~~~~~~~~l~~~~G~~v~~G 305 (373)
|+... ...++.+.++|+++ |.++.-.
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q~ 190 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQA 190 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEec
Confidence 66554 55788999999997 9988773
No 241
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.039 Score=50.34 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce--EEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--vi~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
.+.+|||+|+ |++|...++.+...|+ +|+.++++++..+...++.... .+..+-....++.+.+.+... +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999998 9999999988888999 8999999877655554432211 222222112233333332221 37899
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
++.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9998874
No 242
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.00 E-value=0.15 Score=45.85 Aligned_cols=110 Identities=21% Similarity=0.269 Sum_probs=75.7
Q ss_pred HhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC
Q 017335 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (373)
Q Consensus 197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~ 271 (373)
.......++||=+|.+. |..++++|..+. -.+++.+++++++.+.+++ .|.+..+.-.. . .+..+.+.+...
T Consensus 54 L~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~-~-gdal~~l~~~~~ 130 (219)
T COG4122 54 LARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL-G-GDALDVLSRLLD 130 (219)
T ss_pred HHHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe-c-CcHHHHHHhccC
Confidence 34556788999888754 778888888876 3389999999999888764 56544221111 0 145555555334
Q ss_pred CCccEEE-ECCC--CHHHHHHHHHHhccCCceEEEEcccCCC
Q 017335 272 GGADYCF-ECIG--LTSVMNDAFNSSREGWGKTVILGVEMHG 310 (373)
Q Consensus 272 ~~~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~G~~~~~ 310 (373)
+.||+|| |+-- -+..++.+++.|++| |.++.=....++
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~~G 171 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLFGG 171 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeecccCC
Confidence 5899999 4432 345789999999997 998876665444
No 243
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.039 Score=51.28 Aligned_cols=80 Identities=15% Similarity=0.076 Sum_probs=52.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTD--GGADYC 277 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~vi~~~~~~~~~~~~~i~~~~~--~~~d~v 277 (373)
++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.... ..+..+-.....+.+.+.+... +++|++
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 578999998 9999999999888999 899999998887666543211 1221121011223333333222 368999
Q ss_pred EECCCC
Q 017335 278 FECIGL 283 (373)
Q Consensus 278 id~~g~ 283 (373)
+.+.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999875
No 244
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.97 E-value=0.042 Score=48.53 Aligned_cols=99 Identities=12% Similarity=0.173 Sum_probs=61.6
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHh
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~ 269 (373)
+.+.....++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+.+++ .+.. +.... .++.. ...
T Consensus 22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~--~~~ 91 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA--AAL 91 (195)
T ss_pred HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh--ccc
Confidence 44445556678999999876 777777776 477 99999999887776643 2322 11111 11110 011
Q ss_pred cCCCccEEEECCC-----C---HHHHHHHHHHhccCCceEEEE
Q 017335 270 TDGGADYCFECIG-----L---TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 270 ~~~~~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~ 304 (373)
++.+|+|+.+.- . ...+..+.+.|++| |.++.+
T Consensus 92 -~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~ 132 (195)
T TIGR00477 92 -NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV 132 (195)
T ss_pred -cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence 237999986422 1 24577888899997 985544
No 245
>PRK08317 hypothetical protein; Provisional
Probab=95.95 E-value=0.087 Score=47.35 Aligned_cols=103 Identities=21% Similarity=0.349 Sum_probs=70.4
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHc--C--C-ceEEcCCCCCCccHHHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF--G--I-TDFINPATCGDKTVSQVIK 267 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~l--g--a-~~vi~~~~~~~~~~~~~i~ 267 (373)
+.+...+.++++||.+|+|. |..+..+++..+ ..++++++.+++..+.+++. . . ..++..+. .++
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 45667889999999999987 888888988874 23899999999888887654 1 1 11222111 110
Q ss_pred HhcCCCccEEEECC------CCHHHHHHHHHHhccCCceEEEEcc
Q 017335 268 EMTDGGADYCFECI------GLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 268 ~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
...++.+|+|+... .....+..+.+.|+++ |.++....
T Consensus 82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 125 (241)
T PRK08317 82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT 125 (241)
T ss_pred CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence 12234789988532 2234688999999997 99987653
No 246
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.94 E-value=0.055 Score=49.09 Aligned_cols=81 Identities=15% Similarity=0.227 Sum_probs=51.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCcc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD 275 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d 275 (373)
.++++||+|+ |++|...+..+...|+ +|+.+++++. ..+.+++.+.. +++..+-....++.+.+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999998 8999999988888999 8999988652 22333444432 2222222112334333333322 3699
Q ss_pred EEEECCCC
Q 017335 276 YCFECIGL 283 (373)
Q Consensus 276 ~vid~~g~ 283 (373)
+++.+.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998764
No 247
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.94 E-value=0.061 Score=45.21 Aligned_cols=96 Identities=23% Similarity=0.160 Sum_probs=62.1
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
..+.+++|+|+|.+|...++.+...|..+|++++++.++.+.+ ++++... +.... .+..+ . -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~---~~~~~----~-~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAY---LDLEE----L-LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceee---cchhh----c-cccCCEEEe
Confidence 4578999999999999999888888644899999998776654 4455321 00000 11111 1 137999999
Q ss_pred CCCCHHH----HHHHHHHhccCCceEEEEcc
Q 017335 280 CIGLTSV----MNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 280 ~~g~~~~----~~~~~~~l~~~~G~~v~~G~ 306 (373)
|++.... .......++++ ..+++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence 9886541 11122446775 77787865
No 248
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.087 Score=48.83 Aligned_cols=80 Identities=14% Similarity=0.121 Sum_probs=51.7
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC-ceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI-TDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga-~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v 277 (373)
+.+|||+|+ |.+|...++.+...|. +|+.+++++++.+.+.+ ++. -+.+..+-...+++.+.+..... +++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999998 9999999988888898 89999998877665543 221 12222221111233333333221 378999
Q ss_pred EECCCC
Q 017335 278 FECIGL 283 (373)
Q Consensus 278 id~~g~ 283 (373)
+.+.|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999874
No 249
>PRK06196 oxidoreductase; Provisional
Probab=95.93 E-value=0.049 Score=51.72 Aligned_cols=81 Identities=15% Similarity=0.153 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v 277 (373)
.+.+|||+|+ |++|.+++..+...|+ +|++++++.++.+.+. ++..-+++..+-....++.+.+.+... +++|++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 4679999998 8999999998888999 8999999887765442 222112222221111233333333322 379999
Q ss_pred EECCCC
Q 017335 278 FECIGL 283 (373)
Q Consensus 278 id~~g~ 283 (373)
|.+.|.
T Consensus 104 i~nAg~ 109 (315)
T PRK06196 104 INNAGV 109 (315)
T ss_pred EECCCC
Confidence 998873
No 250
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.92 E-value=0.094 Score=48.28 Aligned_cols=100 Identities=15% Similarity=0.141 Sum_probs=68.7
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcC-
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTD- 271 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~- 271 (373)
+.....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++.-. ..++..+ . .++..
T Consensus 23 ll~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d------~----~~~~~~ 91 (258)
T PRK01683 23 LLARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD------I----ASWQPP 91 (258)
T ss_pred HHhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc------h----hccCCC
Confidence 34555678899999999976 7777888887643499999999988888765322 2233222 1 11222
Q ss_pred CCccEEEECCC------CHHHHHHHHHHhccCCceEEEEc
Q 017335 272 GGADYCFECIG------LTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 272 ~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
..+|+|+.... ....+..+.+.|++| |+++...
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 37999985433 234688899999997 9988753
No 251
>PRK06484 short chain dehydrogenase; Validated
Probab=95.92 E-value=0.088 Score=53.60 Aligned_cols=103 Identities=21% Similarity=0.239 Sum_probs=68.2
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-E--EcCCCCCCccHHHHHHHhcC--CC
Q 017335 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-F--INPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-v--i~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
..++++||+|+ +++|+..++.+...|+ +|+.+++++++.+.+.+ ++... . .|-.+ .+++.+.+.+... +.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 35789999998 8999999999999999 99999998887766644 44322 1 22222 1233333333322 37
Q ss_pred ccEEEECCCCHH--------------------------HHHHHHHHhccCCceEEEEccc
Q 017335 274 ADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 274 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
+|++|.+.|... ..+.++..++.+ |+++.++..
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 999999877420 133445566665 999988753
No 252
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.92 E-value=0.14 Score=46.02 Aligned_cols=79 Identities=23% Similarity=0.294 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-E--EcCCCCCCccHHHHHHHhcC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--INPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-v--i~~~~~~~~~~~~~i~~~~~-- 271 (373)
++.+|||+|+ |.+|...++.+...|. +|+++.+++++.+.+ +..+... + .|-.+ +.++.+.+.+...
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3578999998 9999999999888999 799999988765443 2334322 2 22222 2233333333322
Q ss_pred CCccEEEECCCC
Q 017335 272 GGADYCFECIGL 283 (373)
Q Consensus 272 ~~~d~vid~~g~ 283 (373)
+.+|.++.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 368999998864
No 253
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.92 E-value=0.064 Score=48.64 Aligned_cols=80 Identities=21% Similarity=0.263 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
+++++||+|+ |++|+.+++.+...|+ +|+.+++++++.+.+. ..+.. +.+..+-....++.+.+..... +.
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999999999999 8999999887655432 23432 1222221011223333333222 36
Q ss_pred ccEEEECCC
Q 017335 274 ADYCFECIG 282 (373)
Q Consensus 274 ~d~vid~~g 282 (373)
+|+||.+.|
T Consensus 83 id~vi~~ag 91 (253)
T PRK08217 83 LNGLINNAG 91 (253)
T ss_pred CCEEEECCC
Confidence 899999887
No 254
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.91 E-value=0.14 Score=50.38 Aligned_cols=102 Identities=19% Similarity=0.126 Sum_probs=69.6
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH-HHHcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGG 273 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~-~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~ 273 (373)
.+..+--.+.+|||+|+|-+|.+++..+...|+.+|++..|+.++... ++++|+. ++..+ .+.+.. ..
T Consensus 170 ~~~~~~L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~---------el~~~l-~~ 238 (414)
T COG0373 170 KRIFGSLKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE---------ELLEAL-AE 238 (414)
T ss_pred HHHhcccccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH---------HHHHhh-hh
Confidence 333343478899999999999999999999998899999999988765 5678853 32211 111111 26
Q ss_pred ccEEEECCCCHH---HHHHHHHHhccCCc-eEEEEccc
Q 017335 274 ADYCFECIGLTS---VMNDAFNSSREGWG-KTVILGVE 307 (373)
Q Consensus 274 ~d~vid~~g~~~---~~~~~~~~l~~~~G-~~v~~G~~ 307 (373)
+|+||.+++.+. .-....+.++.... -+++++.+
T Consensus 239 ~DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 239 ADVVISSTSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred CCEEEEecCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 999999998765 23344455554313 46777764
No 255
>PLN02823 spermine synthase
Probab=95.91 E-value=0.073 Score=51.13 Aligned_cols=101 Identities=19% Similarity=0.137 Sum_probs=63.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-c-eEEc-CCC-CCCccHHHHHHHhcCCCccEE
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-T-DFIN-PAT-CGDKTVSQVIKEMTDGGADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~-~vi~-~~~-~~~~~~~~~i~~~~~~~~d~v 277 (373)
..++|||+|+|. |..+..+++..+..+|++++.+++-.+.+++.-. . ..++ .+- ....|..+.+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899999875 6667778887777799999999999998886321 1 0111 000 000223333432 33489999
Q ss_pred E-ECCC-----------CHHHHH-HHHHHhccCCceEEEEc
Q 017335 278 F-ECIG-----------LTSVMN-DAFNSSREGWGKTVILG 305 (373)
Q Consensus 278 i-d~~g-----------~~~~~~-~~~~~l~~~~G~~v~~G 305 (373)
| |... ....++ .+.+.|+++ |.++.-.
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~ 220 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA 220 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence 9 5322 122355 688899997 9987543
No 256
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.89 E-value=0.15 Score=45.55 Aligned_cols=93 Identities=16% Similarity=0.109 Sum_probs=61.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
.|.+|||+|+|.+|..-++.+...|+ +|.+++.+.. ....+.+.|--..+. ++ +... .+ .++|+||-+
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~-----~~~~--dl--~~~~lVi~a 76 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC-----FDAD--IL--EGAFLVIAA 76 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC-----CCHH--Hh--CCcEEEEEC
Confidence 46799999999999999999999999 8888876543 233333444222222 22 1111 11 279999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 017335 281 IGLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
++.+..-..+....+.. |..+....
T Consensus 77 t~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 77 TDDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECC
Confidence 99986455666666675 77776543
No 257
>PRK06128 oxidoreductase; Provisional
Probab=95.88 E-value=0.12 Score=48.70 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=61.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh--H----HHHHHHcCCce-EEcCCCCCCccHHHHHHHhcC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--K----FEIGKKFGITD-FINPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~--~----~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~-- 271 (373)
.++++||+|+ |++|...+..+...|+ +|+.+.++.+ + .+.+++.|... ++..+-....++.+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 4689999998 9999999988888999 8887765432 1 12233345322 222221111223233332222
Q ss_pred CCccEEEECCCCH--------------------------HHHHHHHHHhccCCceEEEEcc
Q 017335 272 GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 272 ~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
+++|++|.+.|.. ..++.+++.++.+ |+++.++.
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS 192 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGS 192 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECC
Confidence 3799999988731 0233445556776 89988765
No 258
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.87 E-value=0.061 Score=49.66 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=52.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCc-eEEcCCCCCCccHHHHHHHhc-CCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMT-DGG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~-~vi~~~~~~~~~~~~~i~~~~-~~~ 273 (373)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ + +.+ ..+..+-....++.+.+.+.. -++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 4789999998 8999999999999999 89999998877655432 2 321 222222211223333333322 237
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++++.|.
T Consensus 86 iD~lv~nag~ 95 (263)
T PRK08339 86 PDIFFFSTGG 95 (263)
T ss_pred CcEEEECCCC
Confidence 9999998874
No 259
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.87 E-value=0.041 Score=49.19 Aligned_cols=107 Identities=16% Similarity=0.137 Sum_probs=68.8
Q ss_pred cchhhhhHHHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce--EEcCCC
Q 017335 183 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPAT 256 (373)
Q Consensus 183 l~~~~~ta~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~--vi~~~~ 256 (373)
+..+...++ +.....++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ .+... ++..+.
T Consensus 61 ~~~p~~~~~--l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~ 135 (212)
T PRK00312 61 ISQPYMVAR--MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG 135 (212)
T ss_pred eCcHHHHHH--HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc
Confidence 333444444 35567789999999999876 55666666654 3 89999999887666643 34322 222211
Q ss_pred CCCccHHHHHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335 257 CGDKTVSQVIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 257 ~~~~~~~~~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
.+ .... +.||+|+...........+.+.|+++ |+++..
T Consensus 136 ------~~---~~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 136 ------WK---GWPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred ------cc---CCCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 11 1112 37999996655555577888999997 998754
No 260
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.86 E-value=0.05 Score=50.57 Aligned_cols=81 Identities=15% Similarity=0.177 Sum_probs=50.3
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~G---~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|++ ++|.+.++.+...|+ +|+.++++++..+.+ +++|....+..+-....++...+.+... +
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 47899999984 899999999989999 899888765432222 3345433222222111233333333322 4
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
.+|+++++.|.
T Consensus 85 ~iD~lVnnAG~ 95 (271)
T PRK06505 85 KLDFVVHAIGF 95 (271)
T ss_pred CCCEEEECCcc
Confidence 79999998873
No 261
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.85 E-value=0.079 Score=49.70 Aligned_cols=44 Identities=23% Similarity=0.203 Sum_probs=38.3
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~ 244 (373)
..+++|+|+|+|+.+.+++..+...|+++|+++.|+.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34789999999999999999888899989999999998877664
No 262
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.85 E-value=0.074 Score=48.05 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=64.7
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTDGGADYCF 278 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d~vi 278 (373)
-+|.+||=+|+|+ |++...+|+ +|+ .|.++|.+++..+.++.-... --+++.. ...+++... ++.||+|+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~-~~~FDvV~ 129 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA-GGQFDVVT 129 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc-CCCccEEE
Confidence 5889999999976 666666665 567 999999999999888742211 1144554 223333322 14899998
Q ss_pred E-----CCCCHH-HHHHHHHHhccCCceEEEEc
Q 017335 279 E-----CIGLTS-VMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 279 d-----~~g~~~-~~~~~~~~l~~~~G~~v~~G 305 (373)
. -+..+. .+..+.++++|+ |.+++.-
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST 161 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLST 161 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence 5 344433 567899999997 9877653
No 263
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.058 Score=48.87 Aligned_cols=81 Identities=20% Similarity=0.257 Sum_probs=52.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce-EEcCCCCCCccHHHHHHHhc--CCCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMT--DGGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~~d~ 276 (373)
++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... .+..+-....+....+.... .+++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999998 9999999999999999 899999987765544 3455432 22222101122222222221 137899
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9998773
No 264
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.07 Score=48.98 Aligned_cols=83 Identities=22% Similarity=0.298 Sum_probs=50.5
Q ss_pred CCCCCEEEEECC-ChHHHHHHHHHHHC-CCCeEEEEcCChhH-HHH----HHHcCC--ceEEcCCCCCCccHHHHHHHhc
Q 017335 200 VEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEK-FEI----GKKFGI--TDFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 200 ~~~~~~VlI~G~-G~vG~~a~~la~~~-G~~~Vi~~~~~~~~-~~~----~~~lga--~~vi~~~~~~~~~~~~~i~~~~ 270 (373)
+..+.+|||+|+ |++|...++-+... |+ +|+++++++++ .+. +++.+. -+++..+-....++.+.+++..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999998 99999988776666 57 99999988765 332 233332 1233222211233333333332
Q ss_pred C-CCccEEEECCCC
Q 017335 271 D-GGADYCFECIGL 283 (373)
Q Consensus 271 ~-~~~d~vid~~g~ 283 (373)
. +++|+++.+.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 479999987764
No 265
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.064 Score=47.97 Aligned_cols=77 Identities=16% Similarity=0.219 Sum_probs=52.2
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-EEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 281 (373)
++++|+|+ |.+|...++.+...|+ +|+.+++++++.+.++..+... ..|-.+ ..++...+.+..++++|+++.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence 47899988 9999998888878899 8999999988877776665432 223222 12232222233223799999887
Q ss_pred CC
Q 017335 282 GL 283 (373)
Q Consensus 282 g~ 283 (373)
|.
T Consensus 79 g~ 80 (222)
T PRK06953 79 GV 80 (222)
T ss_pred Cc
Confidence 64
No 266
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.059 Score=49.19 Aligned_cols=81 Identities=17% Similarity=0.172 Sum_probs=52.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. +.+.+. ++..+-....+..+.+.+... +.
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3679999998 8999999998888999 8999999887765542 234222 222221111223333333222 37
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++.+.|.
T Consensus 84 id~li~~ag~ 93 (254)
T PRK07478 84 LDIAFNNAGT 93 (254)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 267
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.058 Score=49.55 Aligned_cols=81 Identities=21% Similarity=0.327 Sum_probs=53.3
Q ss_pred CCCCCEEEEECC-C-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCceE--E--cCCCCCCccHHHHHHH
Q 017335 200 VEVGSTVAIFGL-G-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITDF--I--NPATCGDKTVSQVIKE 268 (373)
Q Consensus 200 ~~~~~~VlI~G~-G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~~v--i--~~~~~~~~~~~~~i~~ 268 (373)
+..++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...+ +|...+ + |-.+ +.++.+.+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 345789999997 6 799999999999999 89999988876654432 343222 2 2222 1223333332
Q ss_pred hc--CCCccEEEECCCC
Q 017335 269 MT--DGGADYCFECIGL 283 (373)
Q Consensus 269 ~~--~~~~d~vid~~g~ 283 (373)
.. .+.+|++|.+.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 1378999999884
No 268
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.79 E-value=0.12 Score=47.50 Aligned_cols=97 Identities=18% Similarity=0.153 Sum_probs=68.9
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC-
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD- 271 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~- 271 (373)
++......++++||-+|+|. |..+..+++.. +. +|++++.++...+.+++.+.+ ++.. +. .++..
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~-~~~~------d~----~~~~~~ 87 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVD-ARTG------DV----RDWKPK 87 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCc-EEEc------Ch----hhCCCC
Confidence 45556678899999999977 77777787775 55 899999999988888775543 3222 22 12222
Q ss_pred CCccEEEECCC-----C-HHHHHHHHHHhccCCceEEEE
Q 017335 272 GGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 272 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+.||+|+.... . ...+..+.+.|++| |+++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 37999996432 2 34577889999997 998765
No 269
>PRK07832 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.14 Score=47.26 Aligned_cols=76 Identities=16% Similarity=0.231 Sum_probs=48.8
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce----EEcCCCCCCccHHHHHHHhc--CCC
Q 017335 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD----FINPATCGDKTVSQVIKEMT--DGG 273 (373)
Q Consensus 205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~----vi~~~~~~~~~~~~~i~~~~--~~~ 273 (373)
+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|-.+ ..++.+.+.+.. .++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899998 9999999998888999 899999887665443 2234321 123332 122222222221 136
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 270
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.054 Score=49.78 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCc-eEE--cCCCCCCccHHHHHHHhcC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFI--NPATCGDKTVSQVIKEMTD 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l-----ga~-~vi--~~~~~~~~~~~~~i~~~~~ 271 (373)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ + +.. +.+ |-.+ .+++.+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4789999998 8999999999999999 89999998876654422 1 111 122 2222 1233333333222
Q ss_pred --CCccEEEECCCC
Q 017335 272 --GGADYCFECIGL 283 (373)
Q Consensus 272 --~~~d~vid~~g~ 283 (373)
+.+|+++++.|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 379999999873
No 271
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.076 Score=48.00 Aligned_cols=82 Identities=16% Similarity=0.147 Sum_probs=52.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
...+++||+|+ |.+|..++..+...|. +|+++++++++.+.+.+ .+.. .++..+-...+++...+..... +
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34678999998 9999999999988999 99999998876655432 2321 2232222111333333333222 3
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
++|+++.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 272
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=95.73 E-value=0.097 Score=41.14 Aligned_cols=89 Identities=21% Similarity=0.236 Sum_probs=59.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 281 (373)
.+.+|||+|+|.+|..-++.+...|+ +|.+++... +..+ +.-... . ..+ .+. -.++|+|+-++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~----~~~-l~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REF----EED-LDGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-----GGG-CTTESEEEE-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhH----HHH-HhhheEEEecC
Confidence 47899999999999999999999999 999999775 2222 211111 1 122 111 12799999999
Q ss_pred CCHHHHHHHHHHhccCCceEEEEcccC
Q 017335 282 GLTSVMNDAFNSSREGWGKTVILGVEM 308 (373)
Q Consensus 282 g~~~~~~~~~~~l~~~~G~~v~~G~~~ 308 (373)
+.+..-..+.+..+.. |..+.....+
T Consensus 69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p 94 (103)
T PF13241_consen 69 DDPELNEAIYADARAR-GILVNVVDDP 94 (103)
T ss_dssp S-HHHHHHHHHHHHHT-TSEEEETT-C
T ss_pred CCHHHHHHHHHHHhhC-CEEEEECCCc
Confidence 9988566677777765 8888886543
No 273
>PRK04266 fibrillarin; Provisional
Probab=95.73 E-value=0.24 Score=44.85 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=63.9
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD 271 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~ 271 (373)
+...++++++||=+|+|. |..+..+++..+..+|++++.+++..+.+.+ ...-..+..+. .+. .....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~---~~~-~~~~~l-~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADA---RKP-ERYAHV-V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCC---CCc-chhhhc-c
Confidence 457899999999999865 5566677777653389999999977664432 21112332222 110 000111 1
Q ss_pred CCccEEEECCCCH----HHHHHHHHHhccCCceEEEE
Q 017335 272 GGADYCFECIGLT----SVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 272 ~~~d~vid~~g~~----~~~~~~~~~l~~~~G~~v~~ 304 (373)
+.+|+|+-....+ ..+..+.+.|++| |+++..
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 3699999544432 2367888899997 998875
No 274
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.72 E-value=0.15 Score=46.92 Aligned_cols=104 Identities=17% Similarity=0.257 Sum_probs=61.4
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHH-HHc-CCc-eEEcCCCCCCccHHHHHHHhcC-
Q 017335 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIG-KKF-GIT-DFINPATCGDKTVSQVIKEMTD- 271 (373)
Q Consensus 202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~-~~l-ga~-~vi~~~~~~~~~~~~~i~~~~~- 271 (373)
.+++++|+|+ +++|.+.++.+...|+ +|+.+.++. ++.+.+ +++ +.. ..+..+-...+++.+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 4789999997 4899998888888999 888886543 333333 233 211 1221121112333333333322
Q ss_pred -CCccEEEECCCCH-------H----------------------HHHHHHHHhccCCceEEEEccc
Q 017335 272 -GGADYCFECIGLT-------S----------------------VMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 272 -~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
+.+|+++++.|.. . ....+++.++++ |+++.++..
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~isS~ 149 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYL 149 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccC-ceEEEEccc
Confidence 4799999887621 0 122345566776 999988754
No 275
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.72 E-value=0.11 Score=44.15 Aligned_cols=82 Identities=18% Similarity=0.157 Sum_probs=53.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 281 (373)
.|.+|+|+|+|.+|..-++.+...|+ +|.+++ ++..+.+++++... +..+. +.+ ..-.++|+|+-++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~----~dl~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSN----DDIKDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cCh----hcCCCceEEEECC
Confidence 57899999999999998888888999 888774 33333344454222 22222 111 0012799999999
Q ss_pred CCHHHHHHHHHHhccC
Q 017335 282 GLTSVMNDAFNSSREG 297 (373)
Q Consensus 282 g~~~~~~~~~~~l~~~ 297 (373)
+... .+..+...+..
T Consensus 79 ~d~e-~N~~i~~~a~~ 93 (157)
T PRK06719 79 NQHA-VNMMVKQAAHD 93 (157)
T ss_pred CCHH-HHHHHHHHHHH
Confidence 9888 66666655543
No 276
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.72 E-value=0.022 Score=56.95 Aligned_cols=93 Identities=14% Similarity=0.104 Sum_probs=64.5
Q ss_pred HhCCCCCCEEE----EECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhc
Q 017335 197 VAGVEVGSTVA----IFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 197 ~~~~~~~~~Vl----I~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~ 270 (373)
..++++|+++| |+|+ |++|.+++++++..|+ +|+++.+.+.+....+..+.+ .+++... ..+.+.+....
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~~ 103 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKALY 103 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHHH
Confidence 34667888887 7766 9999999999999999 999988766644443333433 4565554 33444443331
Q ss_pred CCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335 271 DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (373)
Q Consensus 271 ~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 308 (373)
..+...++.|.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 2366778888897 9999998643
No 277
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.71 E-value=0.098 Score=47.53 Aligned_cols=98 Identities=17% Similarity=0.227 Sum_probs=59.6
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------HHH----HHHHcCCceEEcCCCCCC
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KFE----IGKKFGITDFINPATCGD 259 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~~----~~~~lga~~vi~~~~~~~ 259 (373)
+.+|+|+|.|++|..++..+-..|..+++.+|.+.- |.+ .++++..+.-+....
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~--- 87 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE--- 87 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee---
Confidence 468999999999999999999999999999986542 111 112222211111111
Q ss_pred ccHH-HHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCc-eEEEE
Q 017335 260 KTVS-QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG-KTVIL 304 (373)
Q Consensus 260 ~~~~-~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~ 304 (373)
..+. +.+.++...++|+|+||+.....-..+.+.+... + .++..
T Consensus 88 ~~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~-~ip~I~s 133 (231)
T cd00755 88 EFLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKR-KIPVISS 133 (231)
T ss_pred eecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHh-CCCEEEE
Confidence 1111 1233333347999999999877555566666554 4 34443
No 278
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.066 Score=49.51 Aligned_cols=80 Identities=20% Similarity=0.296 Sum_probs=51.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---C--C-ceEEcCCCCCCccHHHHHHHhcC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---G--I-TDFINPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l---g--a-~~vi~~~~~~~~~~~~~i~~~~~-- 271 (373)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++.+... ++ + . -.++..+-..+.++.+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3689999998 9999999999999999 8999998876654432 21 1 1 12222221111333333333322
Q ss_pred CCccEEEECCC
Q 017335 272 GGADYCFECIG 282 (373)
Q Consensus 272 ~~~d~vid~~g 282 (373)
+++|++|.+.|
T Consensus 85 ~~~d~li~~ag 95 (276)
T PRK05875 85 GRLHGVVHCAG 95 (276)
T ss_pred CCCCEEEECCC
Confidence 37899999887
No 279
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.70 E-value=0.2 Score=42.82 Aligned_cols=44 Identities=27% Similarity=0.338 Sum_probs=37.4
Q ss_pred CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (373)
Q Consensus 204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 248 (373)
.+|.++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~ 45 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGA 45 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTE
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhh
Confidence 368899999999999998889999 99999999999988887774
No 280
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.071 Score=49.17 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=51.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.. .+.+.. +++..+-....++.+.+.+... ++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 8999999998889999 899999887665433 222322 2222222112333333443322 36
Q ss_pred ccEEEECCC
Q 017335 274 ADYCFECIG 282 (373)
Q Consensus 274 ~d~vid~~g 282 (373)
+|++|.+.|
T Consensus 87 iD~vi~~ag 95 (264)
T PRK07576 87 IDVLVSGAA 95 (264)
T ss_pred CCEEEECCC
Confidence 899998775
No 281
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.68 E-value=0.064 Score=52.60 Aligned_cols=91 Identities=23% Similarity=0.244 Sum_probs=57.7
Q ss_pred EEEECCChHHHHHHHHHHHCCCC-eEEEEcCChhHHHHHHH--cC--Cc-eEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 206 VAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK--FG--IT-DFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 206 VlI~G~G~vG~~a~~la~~~G~~-~Vi~~~~~~~~~~~~~~--lg--a~-~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
|+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+ .+ .. ..+|..+ . +.+.++.. +.|+|++
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-----~-~~l~~~~~-~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-----P-ESLAELLR-GCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-----H-HHHHHHHT-TSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-----H-HHHHHHHh-cCCEEEE
Confidence 78999999999999998877643 89999999999777653 22 11 2233322 2 22444433 5699999
Q ss_pred CCCCHHHHHHHHHHhccCCceEEEE
Q 017335 280 CIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
|+|.......+-.++..+ -.+++.
T Consensus 74 ~~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CCccchhHHHHHHHHHhC-CCeecc
Confidence 999765455555566665 677763
No 282
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.68 E-value=0.066 Score=49.24 Aligned_cols=103 Identities=15% Similarity=0.206 Sum_probs=62.9
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHCCCCeEEEEcCChhHH---HHH-HHcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKF---EIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~G---~vG~~a~~la~~~G~~~Vi~~~~~~~~~---~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|++ ++|.+.++.+...|+ +|+.++++++.. +.+ ++++...++..+-...+++.+.+.+... +
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999973 899999988888999 898888875432 222 2344323332222112333333333322 4
Q ss_pred CccEEEECCCCH--------------H---------------HHHHHHHHhccCCceEEEEcc
Q 017335 273 GADYCFECIGLT--------------S---------------VMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 273 ~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~G~ 306 (373)
.+|+++++.|.. . ....++..++.+ |+++.++.
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss 149 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSY 149 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEec
Confidence 789999887631 0 123456667776 88888765
No 283
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.65 E-value=0.083 Score=50.90 Aligned_cols=36 Identities=31% Similarity=0.251 Sum_probs=32.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
.+.+|+|+|+|++|..++..+..+|..++..+|.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 357899999999999999999999998999898864
No 284
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.64 E-value=0.14 Score=48.57 Aligned_cols=94 Identities=10% Similarity=0.100 Sum_probs=61.0
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (373)
Q Consensus 205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 283 (373)
+|+|+|+ |.+|...+..+...|. +|.+++++.++...+...+.+.+. .+- .+.+ .+.+... ++|+||.+.+.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl-~d~~---~l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDL-SLPE---TLPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCC-CCHH---HHHHHHC-CCCEEEECCCC
Confidence 6999998 9999999999988999 899999987766655555654332 221 1121 2222222 68999998653
Q ss_pred HH------------HHHHHHHHhccCCc--eEEEEcc
Q 017335 284 TS------------VMNDAFNSSREGWG--KTVILGV 306 (373)
Q Consensus 284 ~~------------~~~~~~~~l~~~~G--~~v~~G~ 306 (373)
.. ....++++++.. | +++.++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss 110 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSI 110 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecc
Confidence 11 123455666554 4 7887765
No 285
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.63 E-value=0.073 Score=48.60 Aligned_cols=79 Identities=22% Similarity=0.332 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEE--cCCCCCCccHHHHHHHhc--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT--D 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi--~~~~~~~~~~~~~i~~~~--~ 271 (373)
.+++|||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. ..|.. ..+ |-.+ .+++.+.+.+.. .
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 4789999998 9999999998888899 8999999877654432 22322 122 2222 123333333322 1
Q ss_pred CCccEEEECCCC
Q 017335 272 GGADYCFECIGL 283 (373)
Q Consensus 272 ~~~d~vid~~g~ 283 (373)
+.+|++|.+.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 286
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.63 E-value=0.061 Score=51.38 Aligned_cols=79 Identities=19% Similarity=0.208 Sum_probs=52.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCce----EEcCCCCCCccHHHHHHHhcC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITD----FINPATCGDKTVSQVIKEMTD 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~~----vi~~~~~~~~~~~~~i~~~~~ 271 (373)
.|.+++|+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+ + +... ..|-.+ ...+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 4889999998 8999998888888899 89999999988765432 1 1111 222221 11233444554444
Q ss_pred C-CccEEEECCC
Q 017335 272 G-GADYCFECIG 282 (373)
Q Consensus 272 ~-~~d~vid~~g 282 (373)
+ .+|+++++.|
T Consensus 130 ~~didilVnnAG 141 (320)
T PLN02780 130 GLDVGVLINNVG 141 (320)
T ss_pred CCCccEEEEecC
Confidence 4 6779998876
No 287
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.63 E-value=0.071 Score=48.59 Aligned_cols=75 Identities=13% Similarity=0.061 Sum_probs=49.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGGADY 276 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~ 276 (373)
+.++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.++. .+.. .++..+- .+. +.+.....+++|+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~---~~~-~~~~~~~~~~id~ 76 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL---TDA-IDRAQAAEWDVDV 76 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC---CCH-HHHHHHhcCCCCE
Confidence 468999998 9999999999999999 99999988776555432 2321 1221111 111 2233333348999
Q ss_pred EEECCC
Q 017335 277 CFECIG 282 (373)
Q Consensus 277 vid~~g 282 (373)
+|.+.|
T Consensus 77 vi~~ag 82 (257)
T PRK09291 77 LLNNAG 82 (257)
T ss_pred EEECCC
Confidence 999877
No 288
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.63 E-value=0.1 Score=48.09 Aligned_cols=93 Identities=22% Similarity=0.246 Sum_probs=62.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhcCCC
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTDGG 273 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~~~~ 273 (373)
.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++ .|.. .++.. +.. .+....++.
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~~-~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AAQ-DIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CHH-HHhhhcCCC
Confidence 4567999999877 7778888775 77 99999999998887764 2321 22222 121 122223347
Q ss_pred ccEEEECCC------CHHHHHHHHHHhccCCceEEEE
Q 017335 274 ADYCFECIG------LTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 274 ~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+|+|+.... ....+..+.+.|++| |+++.+
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 999995321 233578899999997 998765
No 289
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.62 E-value=0.076 Score=48.72 Aligned_cols=78 Identities=19% Similarity=0.250 Sum_probs=50.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (373)
Q Consensus 205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v 277 (373)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+..+.+..+-...+++.+.+.+... +++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899998 8999999998888999 8999999887654442 223222332222111333333333322 379999
Q ss_pred EECCCC
Q 017335 278 FECIGL 283 (373)
Q Consensus 278 id~~g~ 283 (373)
|++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 998774
No 290
>PRK05717 oxidoreductase; Validated
Probab=95.61 E-value=0.077 Score=48.51 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=51.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
.+.++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ +.++.. +.+..+-....++.+.+.+... +.+|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999998 9999999999888999 899998876654443 344422 1222221011223333333322 36899
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
+|.+.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9988774
No 291
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.59 E-value=0.093 Score=48.20 Aligned_cols=81 Identities=21% Similarity=0.272 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c--CC-ceEEcCCCCCCccHHHHHHHhc-CCCcc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GI-TDFINPATCGDKTVSQVIKEMT-DGGAD 275 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l--ga-~~vi~~~~~~~~~~~~~i~~~~-~~~~d 275 (373)
++.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ + +. .+.+..+-....++........ .+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999998 9999999998888999 89999999877665543 2 21 1222222101122222222111 24789
Q ss_pred EEEECCCC
Q 017335 276 YCFECIGL 283 (373)
Q Consensus 276 ~vid~~g~ 283 (373)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99998774
No 292
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.59 E-value=0.11 Score=48.37 Aligned_cols=93 Identities=16% Similarity=0.083 Sum_probs=61.6
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC---CceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg---a~~vi~~~~~~~~~~~~~i~~~~~~~~d 275 (373)
...+++++|+|+|++|.+.+..+...|+ +|+++++++++.+.+. .+. ....+. +. +.....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~--------~~----~~~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS--------MD----ELPLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec--------hh----hhcccCcc
Confidence 3457899999999999999988888898 9999999987765543 332 211211 11 11113689
Q ss_pred EEEECCCCHHH--H---HHHHHHhccCCceEEEEcc
Q 017335 276 YCFECIGLTSV--M---NDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 276 ~vid~~g~~~~--~---~~~~~~l~~~~G~~v~~G~ 306 (373)
+||+|++.... . ......++++ ..++++..
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 99999986420 1 1123557786 78888855
No 293
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.58 E-value=0.2 Score=45.63 Aligned_cols=107 Identities=15% Similarity=0.206 Sum_probs=68.6
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHh
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~ 269 (373)
....+..+.++||-+|.|. |..++.+++.++ ..+|+.++.+++..+.+++ .|...-+.... .+..+.+.++
T Consensus 61 ~~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l 136 (234)
T PLN02781 61 SMLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQL 136 (234)
T ss_pred HHHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHH
Confidence 3445666788999999855 666677777654 3499999999988777753 45322111111 2344444443
Q ss_pred c----CCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcc
Q 017335 270 T----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 270 ~----~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
. .+.||+||--... ...++.+++.+++| |.++.-..
T Consensus 137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn~ 179 (234)
T PLN02781 137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDNT 179 (234)
T ss_pred HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEcC
Confidence 2 2379999944332 33577889999997 98876544
No 294
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.075 Score=48.67 Aligned_cols=81 Identities=16% Similarity=0.231 Sum_probs=51.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFINPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l-----ga~-~vi~~~~~~~~~~~~~i~~~~~-- 271 (373)
.++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ + +.. .++..+-....++...+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4689999998 8999999999989999 89999998876654432 2 211 1222221111233333333222
Q ss_pred CCccEEEECCCC
Q 017335 272 GGADYCFECIGL 283 (373)
Q Consensus 272 ~~~d~vid~~g~ 283 (373)
+.+|++|.+.|.
T Consensus 85 g~id~li~~ag~ 96 (260)
T PRK07063 85 GPLDVLVNNAGI 96 (260)
T ss_pred CCCcEEEECCCc
Confidence 379999998873
No 295
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.087 Score=48.24 Aligned_cols=79 Identities=14% Similarity=0.103 Sum_probs=50.9
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC---ceEEcCCCCCCccHHHHHHHhcC--CCcc
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI---TDFINPATCGDKTVSQVIKEMTD--GGAD 275 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga---~~vi~~~~~~~~~~~~~i~~~~~--~~~d 275 (373)
+.+|||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ +.. -+.+.-+-....++.+.+.+... +.+|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 468999998 9999999988888899 99999998887665533 221 11222222111233333333322 2689
Q ss_pred EEEECCC
Q 017335 276 YCFECIG 282 (373)
Q Consensus 276 ~vid~~g 282 (373)
+++.+.|
T Consensus 81 ~lv~~ag 87 (257)
T PRK07024 81 VVIANAG 87 (257)
T ss_pred EEEECCC
Confidence 9999877
No 296
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.55 E-value=0.13 Score=46.56 Aligned_cols=102 Identities=14% Similarity=0.149 Sum_probs=61.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh------HHHHHH--HcC---------------Cc-eEEcCCCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE------KFEIGK--KFG---------------IT-DFINPATC 257 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~------~~~~~~--~lg---------------a~-~vi~~~~~ 257 (373)
...+|+|+|.|++|.+++..+-..|+.++..+|.+.- ++-.+. ..| .. +|--.+.
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 4688999999999999999999999999988886442 111111 112 11 1111111
Q ss_pred CCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 258 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
.=..+.+.++...++|+|+||+..-..=-.++..+.++.=.++..+.
T Consensus 108 --f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~G 154 (263)
T COG1179 108 --FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMG 154 (263)
T ss_pred --hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecc
Confidence 00113344555568999999999765433444444443145666654
No 297
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.088 Score=47.75 Aligned_cols=81 Identities=23% Similarity=0.267 Sum_probs=50.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ .+.. +.+..+-....++...+.+... ++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999998888999 99999998766544322 2221 2222222111222222222211 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 298
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.085 Score=48.12 Aligned_cols=81 Identities=14% Similarity=0.148 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+ .+.. +.+..+-...+++...+.+... +.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 5689999998 8999999998889999 99999998876555432 2321 1222222112333333333322 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 8999988763
No 299
>PRK08643 acetoin reductase; Validated
Probab=95.52 E-value=0.082 Score=48.26 Aligned_cols=80 Identities=18% Similarity=0.250 Sum_probs=50.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCce-EEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ .+... .+..+-..++.+.+.+.+... +++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999998 9999999999989999 99999988776544422 23221 222221111223333333221 379
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|++|.+.|.
T Consensus 81 d~vi~~ag~ 89 (256)
T PRK08643 81 NVVVNNAGV 89 (256)
T ss_pred CEEEECCCC
Confidence 999998864
No 300
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.52 E-value=0.17 Score=47.05 Aligned_cols=102 Identities=17% Similarity=0.157 Sum_probs=61.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------HH----HHHHHcCCc-eEEcCCCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KF----EIGKKFGIT-DFINPATC 257 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~----~~~~~lga~-~vi~~~~~ 257 (373)
.+.+|+|+|.|++|..++..+-..|..++..+|.+.- |. +.+.++..+ +|......
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 5678999999999999999999999889999886521 11 111222221 12111110
Q ss_pred CCccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335 258 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 258 ~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
.. .+.+.++...++|+||||+.....-..+.+.+...+=.++..|.
T Consensus 109 i~---~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG 154 (268)
T PRK15116 109 IT---PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG 154 (268)
T ss_pred cC---hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 00 11223333347999999999865444555555553134555554
No 301
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.52 E-value=0.081 Score=48.71 Aligned_cols=80 Identities=16% Similarity=0.204 Sum_probs=48.2
Q ss_pred CCCEEEEECC-C--hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~-G--~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|+ + ++|.+.++.+...|+ +|+.++++++..+.++ +.|....+..+-...++..+.+.+... +
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5788999998 4 799999888888999 8888887643222222 235333222221112333333333322 3
Q ss_pred CccEEEECCC
Q 017335 273 GADYCFECIG 282 (373)
Q Consensus 273 ~~d~vid~~g 282 (373)
.+|+++++.|
T Consensus 86 ~iDilVnnag 95 (260)
T PRK06603 86 SFDFLLHGMA 95 (260)
T ss_pred CccEEEEccc
Confidence 7999998876
No 302
>PLN02244 tocopherol O-methyltransferase
Probab=95.51 E-value=0.043 Score=52.96 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=63.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhcCCC
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMTDGG 273 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~~~~ 273 (373)
+++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++ .|.. .++..+. .++ ...++.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence 7889999999876 6677788887788 99999999987766654 2321 1222211 110 122347
Q ss_pred ccEEEECCCC------HHHHHHHHHHhccCCceEEEEc
Q 017335 274 ADYCFECIGL------TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 274 ~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G 305 (373)
||+|+..-.. ...+..+.+.|++| |++++..
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~ 223 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVT 223 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence 9999864321 33578899999997 9998764
No 303
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.061 Score=48.61 Aligned_cols=81 Identities=22% Similarity=0.248 Sum_probs=51.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCC-c-e--EEcCCCCCC---ccHHHHHHHh
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGI-T-D--FINPATCGD---KTVSQVIKEM 269 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga-~-~--vi~~~~~~~---~~~~~~i~~~ 269 (373)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+. + . .+|-.+... ..+.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4679999998 9999999988888999 8999999987665442 2221 1 1 122111001 1233344443
Q ss_pred cCCCccEEEECCCC
Q 017335 270 TDGGADYCFECIGL 283 (373)
Q Consensus 270 ~~~~~d~vid~~g~ 283 (373)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33478999998883
No 304
>PRK07574 formate dehydrogenase; Provisional
Probab=95.50 E-value=0.13 Score=50.41 Aligned_cols=45 Identities=31% Similarity=0.380 Sum_probs=36.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 247 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg 247 (373)
.|.+|.|+|.|.+|+..++.++.+|. +|++.+++....+..+.+|
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 46799999999999999999999999 9999998764333333444
No 305
>PRK06484 short chain dehydrogenase; Validated
Probab=95.50 E-value=0.25 Score=50.28 Aligned_cols=79 Identities=15% Similarity=0.257 Sum_probs=54.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCce---EEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD---FINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~---vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
.++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++... .+|-.+ .+++.+.+.+... +++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5789999998 8999999999999999 999999988876554 4455322 223222 2333333333322 379
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|+++++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998764
No 306
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.50 E-value=0.076 Score=53.52 Aligned_cols=78 Identities=24% Similarity=0.361 Sum_probs=55.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh---------------------hHHHHHHHcCCceEEcCCCCCCc
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP---------------------EKFEIGKKFGITDFINPATCGDK 260 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~---------------------~~~~~~~~lga~~vi~~~~~~~~ 260 (373)
.+++|+|+|+|+.|+.++..++..|. .|++++..+ ...+.++++|.+..++.... .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence 57899999999999999999999999 788887654 24566778898766554320 1
Q ss_pred cHHHHHHHhcCCCccEEEECCCCHH
Q 017335 261 TVSQVIKEMTDGGADYCFECIGLTS 285 (373)
Q Consensus 261 ~~~~~i~~~~~~~~d~vid~~g~~~ 285 (373)
++ .+.+.. .++|.||.++|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 11 111221 26999999999743
No 307
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.088 Score=47.78 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c--CCc-eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GIT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l--ga~-~vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
.+.++||+|+ |.+|...++.+...|+ +|+.+.++.++.....+ + +.. +++..+-....++.+.+.+... +++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999998 9999999988888898 89999988776544322 2 321 2222222111233333333322 379
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|+++.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999998884
No 308
>PLN02476 O-methyltransferase
Probab=95.48 E-value=0.17 Score=47.19 Aligned_cols=111 Identities=15% Similarity=0.176 Sum_probs=71.8
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKE 268 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~ 268 (373)
+....+....++||=+|.+. |..++.+|+.++. .+|+.++.+++..+.++ +.|..+-+.-.. .+..+.+.+
T Consensus 110 L~~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~ 185 (278)
T PLN02476 110 LAMLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKS 185 (278)
T ss_pred HHHHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHH
Confidence 34455667789999999854 6677777877642 27999999998877774 456532222222 334444444
Q ss_pred hc----CCCccEEEECCCC---HHHHHHHHHHhccCCceEEEEcccCC
Q 017335 269 MT----DGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVEMH 309 (373)
Q Consensus 269 ~~----~~~~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~G~~~~ 309 (373)
+. .+.||.||--... ...++.+++.|++| |.++.=.....
T Consensus 186 l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNvL~~ 232 (278)
T PLN02476 186 MIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNVLWH 232 (278)
T ss_pred HHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecCccC
Confidence 31 2379999944443 33578889999997 99876554433
No 309
>PLN03139 formate dehydrogenase; Provisional
Probab=95.47 E-value=0.1 Score=51.08 Aligned_cols=46 Identities=22% Similarity=0.248 Sum_probs=37.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 248 (373)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 57899999999999999999999999 99999987544444444443
No 310
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.46 E-value=0.11 Score=47.31 Aligned_cols=81 Identities=19% Similarity=0.203 Sum_probs=51.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCce-EEcCCCCCCccHHHHHHHhc--CCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~ 273 (373)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++.+... .+..+-.....+.+.+.+.. .++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 9999999999999999 899999988655433 2344432 22222101122222222221 136
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999998874
No 311
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.46 E-value=0.088 Score=48.83 Aligned_cols=102 Identities=18% Similarity=0.198 Sum_probs=68.1
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC--c--eEEcCCCCCCccHHHHHHHh
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--T--DFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga--~--~vi~~~~~~~~~~~~~i~~~ 269 (373)
+.....++++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++... . .++.. ++.+ ...
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~------D~~~--~~~ 113 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAN------DILK--KDF 113 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEEC------Cccc--CCC
Confidence 55667889999999999875 5566677777787 99999999988888765321 1 11111 1110 011
Q ss_pred cCCCccEEEEC--C---C---CHHHHHHHHHHhccCCceEEEEcc
Q 017335 270 TDGGADYCFEC--I---G---LTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 270 ~~~~~d~vid~--~---g---~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
.++.||+|+.. . + ....+..+.+.|++| |+++....
T Consensus 114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 22379999952 1 1 233677888999997 99987654
No 312
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.095 Score=47.91 Aligned_cols=80 Identities=21% Similarity=0.224 Sum_probs=51.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHH----HHHcCCce-E--EcCCCCCCccHHHHHHHhc--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITD-F--INPATCGDKTVSQVIKEMT--D 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~----~~~lga~~-v--i~~~~~~~~~~~~~i~~~~--~ 271 (373)
.+++++|+|+ |++|...++.+...|++.|++++++.++... +++.+... . .|-.+ ..++.+.+.... .
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEAF 82 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 5688999998 8999999999999999349999988765542 23344322 1 22222 122322222221 1
Q ss_pred CCccEEEECCCC
Q 017335 272 GGADYCFECIGL 283 (373)
Q Consensus 272 ~~~d~vid~~g~ 283 (373)
+++|++|.+.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 379999999874
No 313
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.46 E-value=0.37 Score=38.23 Aligned_cols=92 Identities=18% Similarity=0.174 Sum_probs=61.5
Q ss_pred EEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCHH
Q 017335 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 285 (373)
Q Consensus 206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 285 (373)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+. .+.+ .+++..-..++.++-+++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~-~~~~---~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA-TDPE---VLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T-TSHH---HHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc-hhhh---HHhhcCccccCEEEEccCCHH
Confidence 6788999999999999999776 999999999999999988854 555544 1222 233332237899998887655
Q ss_pred HHH---HHHHHhccCCceEEEE
Q 017335 286 VMN---DAFNSSREGWGKTVIL 304 (373)
Q Consensus 286 ~~~---~~~~~l~~~~G~~v~~ 304 (373)
.-. ...+.+.+. .+++..
T Consensus 75 ~n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 75 ENLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHHCCC-CeEEEE
Confidence 222 233334453 555544
No 314
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.46 E-value=0.15 Score=42.41 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=29.0
Q ss_pred EEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (373)
Q Consensus 205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~ 236 (373)
+|+|+|+|++|...+..+...|.+++..+|.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999889999865
No 315
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.45 E-value=0.095 Score=47.49 Aligned_cols=80 Identities=20% Similarity=0.172 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC-ceEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga-~~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
++.++||+|+ |.+|...+..+...|+ +|+.++++.++...+.+ .+. .+++..+-....++.+.+.+... ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999998 9999999999988999 89999988776554432 232 22333222111223333333222 36
Q ss_pred ccEEEECCC
Q 017335 274 ADYCFECIG 282 (373)
Q Consensus 274 ~d~vid~~g 282 (373)
+|++|.+.|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 899999887
No 316
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.098 Score=47.96 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=50.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
+.+|||+|+ |++|..+++.+...|+ +|+++++++++.+.+. ..+.. +++..+-....++...+.+... +++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 357999998 9999999999989999 9999999876654432 23432 1222221111233333333322 368
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|++|.+.|.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999998763
No 317
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.092 Score=47.84 Aligned_cols=81 Identities=22% Similarity=0.283 Sum_probs=51.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~ 273 (373)
.+++++|+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++.+.. +.+..+-....++...+.+.. .++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 8999999988888899 899999987764433 233422 222222211122222222221 137
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++.+.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999998774
No 318
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.13 Score=47.05 Aligned_cols=79 Identities=20% Similarity=0.231 Sum_probs=51.3
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCc-eEEcCCCCCCccHHHHHHHhcCCCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTDGGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~-~vi~~~~~~~~~~~~~i~~~~~~~~ 274 (373)
.++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ + +.. +.+..+-....++.+.+... +.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence 4789999998 8999999988888999 99999998876655332 1 321 22222221112232222221 479
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|+++.+.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999998874
No 319
>PLN03075 nicotianamine synthase; Provisional
Probab=95.42 E-value=0.11 Score=48.88 Aligned_cols=97 Identities=18% Similarity=0.178 Sum_probs=65.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcC-C----ceEEcCCCCCCccHHHHHHHhc--CC
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFG-I----TDFINPATCGDKTVSQVIKEMT--DG 272 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lg-a----~~vi~~~~~~~~~~~~~i~~~~--~~ 272 (373)
.+.++|+-+|+|+.++.++.+++.+.. .+++.+|.+++..+.+++.- . ..-+.-.. .|.. +.. .+
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~----~~~~~l~ 194 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVM----DVTESLK 194 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchh----hcccccC
Confidence 378999999999999988888876543 38999999999888887632 1 11111111 1222 122 24
Q ss_pred CccEEEECC-------CCHHHHHHHHHHhccCCceEEEEc
Q 017335 273 GADYCFECI-------GLTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 273 ~~d~vid~~-------g~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
+||+||-.+ .....++.+.+.|++| |.++.-.
T Consensus 195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred CcCEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 899999554 2344688999999997 8877543
No 320
>PRK07985 oxidoreductase; Provisional
Probab=95.42 E-value=0.21 Score=46.97 Aligned_cols=103 Identities=15% Similarity=0.121 Sum_probs=61.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~--~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~-- 271 (373)
.++++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+.+ ++.|.. +.+..+-...+++.+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5679999998 8999999999989999 888876542 233222 223422 1222222111333333333322
Q ss_pred CCccEEEECCCCH--------------------------HHHHHHHHHhccCCceEEEEcc
Q 017335 272 GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 272 ~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
+++|+++.+.|.. ..+..+++.++.+ |+++.++.
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS 186 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSS 186 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECC
Confidence 3789999887631 0233455556676 89998875
No 321
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.18 Score=46.83 Aligned_cols=101 Identities=19% Similarity=0.285 Sum_probs=60.4
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc-CCCccE
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT-DGGADY 276 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~-~~~~d~ 276 (373)
+++++|.|+|++|.+++..+. .|+ +|+.+++++++.+.+. ..|.+ +++..+-...+++.+.+.+.. .+++|+
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 467899999999999888875 788 9999999877654432 22422 222222111133333333321 137999
Q ss_pred EEECCCCHH------------------HHHHHHHHhccCCceEEEEcc
Q 017335 277 CFECIGLTS------------------VMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 277 vid~~g~~~------------------~~~~~~~~l~~~~G~~v~~G~ 306 (373)
++++.|... .++.+.+.++.+ |+++.++.
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS 126 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIAS 126 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEe
Confidence 999887421 133445556665 77776654
No 322
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.095 Score=49.78 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=50.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc-----CCc-eEE--cCCCCCCccHHHHHHHhc-
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF-----GIT-DFI--NPATCGDKTVSQVIKEMT- 270 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l-----ga~-~vi--~~~~~~~~~~~~~i~~~~- 270 (373)
.+++++|+|+ +++|.+++..+...|+ +|+.+.+++++.+.+. ++ +.. +++ |-.+ ..++.+.+.+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 4689999998 8999999988888999 9999999887655432 11 111 222 2222 122222332322
Q ss_pred -CCCccEEEECCCC
Q 017335 271 -DGGADYCFECIGL 283 (373)
Q Consensus 271 -~~~~d~vid~~g~ 283 (373)
.+.+|++|++.|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 2378999988763
No 323
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.41 E-value=0.21 Score=43.94 Aligned_cols=97 Identities=18% Similarity=0.183 Sum_probs=58.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCceE-EcCCCCCCccHHHHHHHhcCCCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITDF-INPATCGDKTVSQVIKEMTDGGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~~v-i~~~~~~~~~~~~~i~~~~~~~~ 274 (373)
.+.+++|+|+ |.+|...+..+...|. +|+.+.++.++.+.+.+ + +.... .+..+ ..++.+.+ .++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~-----~~~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI-----KGA 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH-----hcC
Confidence 5789999997 9999998888888898 99999999887665533 2 22211 11111 01221222 268
Q ss_pred cEEEECCCCHHHHHHHHH-HhccCCceEEEEccc
Q 017335 275 DYCFECIGLTSVMNDAFN-SSREGWGKTVILGVE 307 (373)
Q Consensus 275 d~vid~~g~~~~~~~~~~-~l~~~~G~~v~~G~~ 307 (373)
|+||.++........... ..+++ -.++++...
T Consensus 99 diVi~at~~g~~~~~~~~~~~~~~-~vv~D~~~~ 131 (194)
T cd01078 99 DVVFAAGAAGVELLEKLAWAPKPL-AVAADVNAV 131 (194)
T ss_pred CEEEECCCCCceechhhhcccCce-eEEEEccCC
Confidence 999998886552111122 22333 456766654
No 324
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.40 E-value=0.1 Score=47.72 Aligned_cols=81 Identities=21% Similarity=0.325 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.++||+|+ |.+|...++.+...|+ +|++++++.++.+.+. ..+.. +.+..+-....++.+.+.+... ++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999998 9999999998888999 8999999887765543 22322 1222222112333333333222 37
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 8999998774
No 325
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=95.40 E-value=0.17 Score=44.24 Aligned_cols=72 Identities=24% Similarity=0.335 Sum_probs=57.6
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (373)
Q Consensus 199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi 278 (373)
-++||.+||=+|+|- |.+...+.+..++ +.++++.++++.....+-|.. |+. .++-+.+....++.||+||
T Consensus 10 ~I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~sFD~VI 80 (193)
T PF07021_consen 10 WIEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQSFDYVI 80 (193)
T ss_pred HcCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCCCccEEe
Confidence 478999999999986 7777777778899 999999999998888777765 554 3455567777666999999
Q ss_pred E
Q 017335 279 E 279 (373)
Q Consensus 279 d 279 (373)
-
T Consensus 81 l 81 (193)
T PF07021_consen 81 L 81 (193)
T ss_pred h
Confidence 3
No 326
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.40 E-value=0.088 Score=48.13 Aligned_cols=79 Identities=16% Similarity=0.233 Sum_probs=50.0
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-H----cCC--ceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K----FGI--TDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~----lga--~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
+++|||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. + .+. -+.+..+-..+.++.+.+.+... +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 568999998 8999999988888899 8999998876554432 1 221 12232222111233333333321 3
Q ss_pred CccEEEECCC
Q 017335 273 GADYCFECIG 282 (373)
Q Consensus 273 ~~d~vid~~g 282 (373)
++|+++.+.|
T Consensus 81 ~id~vv~~ag 90 (259)
T PRK12384 81 RVDLLVYNAG 90 (259)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 327
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.39 E-value=0.1 Score=49.25 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=50.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc-----CCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF-----GIT-DFINPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l-----ga~-~vi~~~~~~~~~~~~~i~~~~~-- 271 (373)
.+.+|||+|+ |++|..+++.+...|+ +|+.+.++.++.+.+. ++ +.. +++..+-....++.+.+.+...
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 5689999998 9999999998888899 8999998877654331 11 111 1222222111233333333322
Q ss_pred CCccEEEECCC
Q 017335 272 GGADYCFECIG 282 (373)
Q Consensus 272 ~~~d~vid~~g 282 (373)
+++|++|.+.|
T Consensus 94 ~~iD~li~nAg 104 (306)
T PRK06197 94 PRIDLLINNAG 104 (306)
T ss_pred CCCCEEEECCc
Confidence 36999999887
No 328
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.39 E-value=0.091 Score=55.16 Aligned_cols=77 Identities=27% Similarity=0.308 Sum_probs=56.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh---------------------HHHHHHHcCCceEEcCCCCCCc
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK 260 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~lga~~vi~~~~~~~~ 260 (373)
.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. ..+.++++|.+..++..-..+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8999887653 4566778898766665321112
Q ss_pred cHHHHHHHhcCCCccEEEECCCCH
Q 017335 261 TVSQVIKEMTDGGADYCFECIGLT 284 (373)
Q Consensus 261 ~~~~~i~~~~~~~~d~vid~~g~~ 284 (373)
.+ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 22 1221 2799999999864
No 329
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.1 Score=47.54 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=50.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.+|||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+ .+.. +.+..+-....++.+.+.+... +.
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 8999999999999999 99999998766554432 2321 2222222111223233333222 36
Q ss_pred ccEEEECCC
Q 017335 274 ADYCFECIG 282 (373)
Q Consensus 274 ~d~vid~~g 282 (373)
+|+++.+.|
T Consensus 86 id~li~~ag 94 (252)
T PRK07035 86 LDILVNNAA 94 (252)
T ss_pred CCEEEECCC
Confidence 899998887
No 330
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.38 E-value=0.11 Score=50.16 Aligned_cols=36 Identities=33% Similarity=0.263 Sum_probs=32.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
...+|+|+|+|++|..+++.+...|..++..+|.+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 357899999999999999999999999999999763
No 331
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.37 E-value=0.26 Score=42.98 Aligned_cols=99 Identities=21% Similarity=0.267 Sum_probs=65.0
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHH
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKE 268 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~ 268 (373)
.....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ .+.. .++..+. . .
T Consensus 24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~------~----~ 92 (187)
T PRK08287 24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEA------P----I 92 (187)
T ss_pred HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCc------h----h
Confidence 4455678899999999876 6777777776543399999999987777653 3332 2332211 1 1
Q ss_pred hcCCCccEEEECCC---CHHHHHHHHHHhccCCceEEEEc
Q 017335 269 MTDGGADYCFECIG---LTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 269 ~~~~~~d~vid~~g---~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
...+.+|+|+.... -...+..+.+.|+++ |+++...
T Consensus 93 ~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 93 ELPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred hcCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 11237999995432 133577889999997 9987653
No 332
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.37 E-value=0.12 Score=47.53 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=31.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
...+|+|+|+|++|..++..+...|.+++..+|.+.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 457999999999999999999999998998887643
No 333
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.36 E-value=0.099 Score=48.16 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=49.0
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|+ +++|.+.++.+...|+ +|+.+.+.+...+.+++ .|....+..+-...+++.+.+.+... +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5789999994 4899999998888999 88887665433333322 34322222222112333333333322 3
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
++|+++++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999998764
No 334
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.36 E-value=0.1 Score=47.72 Aligned_cols=35 Identities=26% Similarity=0.376 Sum_probs=31.4
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
+.+|+|+|+|++|..+++.+...|.++++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999999999988754
No 335
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.36 E-value=0.1 Score=48.31 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=51.3
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi 278 (373)
.++||+|+ |.+|...++.+...|. +|+++.+++++.+.+++ .+.. .++..+-.....+.+.+.+... +++|++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57999998 9999999988888999 89999999887766654 2321 1222221111223333333221 3789999
Q ss_pred ECCCC
Q 017335 279 ECIGL 283 (373)
Q Consensus 279 d~~g~ 283 (373)
.+.|.
T Consensus 82 ~~ag~ 86 (276)
T PRK06482 82 SNAGY 86 (276)
T ss_pred ECCCC
Confidence 98773
No 336
>PRK08589 short chain dehydrogenase; Validated
Probab=95.35 E-value=0.094 Score=48.57 Aligned_cols=79 Identities=23% Similarity=0.289 Sum_probs=49.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cCCc-eE--EcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DF--INPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~-~v--i~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|+ +++|.+.++.+...|+ +|++++++++..+.+++ .+.. .. .|-.+ ..++...+.+... +
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 4789999998 8999999988888999 99999988433333332 2321 22 22222 1233333333322 3
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
.+|++|++.|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 68999998763
No 337
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.12 Score=46.86 Aligned_cols=42 Identities=17% Similarity=0.138 Sum_probs=35.6
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc
Q 017335 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 246 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l 246 (373)
.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+...
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence 57899998 9999998888888899 899999998887766543
No 338
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.34 E-value=0.1 Score=48.30 Aligned_cols=80 Identities=24% Similarity=0.238 Sum_probs=51.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.+++|+|+ |++|++.+..+...|+ +|+++++++++.+.+. ..+.. ..+..+-....++...+.+... +.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999998 8999999999989999 8999998876654432 22322 2222222111223333333222 37
Q ss_pred ccEEEECCC
Q 017335 274 ADYCFECIG 282 (373)
Q Consensus 274 ~d~vid~~g 282 (373)
+|++|.+.|
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 999999877
No 339
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.34 E-value=0.096 Score=49.71 Aligned_cols=104 Identities=11% Similarity=-0.015 Sum_probs=69.5
Q ss_pred CCCCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHH-HcCCc--eEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGAD 275 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~-~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d 275 (373)
-....+++|+|+|..|.+.+..+. ..+.++|.+.++++++.+.+. ++... .+. . .+..+.+ .++|
T Consensus 122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av-----~~aD 190 (304)
T PRK07340 122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIP-----EAVD 190 (304)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHh-----hcCC
Confidence 345679999999999999888876 467778999999988866653 34311 111 1 1232233 2799
Q ss_pred EEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH
Q 017335 276 YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 318 (373)
Q Consensus 276 ~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~ 318 (373)
+|+.|+++..-+-.. .+++| -.+..+|.+..+ .-+++..
T Consensus 191 iVitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~p~-~~El~~~ 229 (304)
T PRK07340 191 LVVTATTSRTPVYPE--AARAG-RLVVAVGAFTPD-MAELAPR 229 (304)
T ss_pred EEEEccCCCCceeCc--cCCCC-CEEEecCCCCCC-cccCCHH
Confidence 999988865523233 37897 899999976543 3356654
No 340
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.33 E-value=0.13 Score=46.44 Aligned_cols=79 Identities=15% Similarity=0.104 Sum_probs=50.9
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-HHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCF 278 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vi 278 (373)
++++||+|+ |++|...++.+...|+ +|+.+++++++ .+.++..++. .+..+-....++.+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence 468999998 8999999998888999 89999887653 3334445542 222222112333333333322 3699999
Q ss_pred ECCCC
Q 017335 279 ECIGL 283 (373)
Q Consensus 279 d~~g~ 283 (373)
.+.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98773
No 341
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.12 Score=46.88 Aligned_cols=79 Identities=20% Similarity=0.233 Sum_probs=50.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----c--CC-ceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GI-TDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----l--ga-~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.. . +. -+++..+-...+++.+.+.+... +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 568999998 9999998888888898 89999998877655432 1 21 12222222112333333333322 3
Q ss_pred CccEEEECCC
Q 017335 273 GADYCFECIG 282 (373)
Q Consensus 273 ~~d~vid~~g 282 (373)
++|++|.+.|
T Consensus 81 ~id~vi~~ag 90 (248)
T PRK08251 81 GLDRVIVNAG 90 (248)
T ss_pred CCCEEEECCC
Confidence 7999999886
No 342
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.33 E-value=0.16 Score=47.86 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=58.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh---hHHHH-HHHcC---Cc-eE--EcCCCCCCccHHHHHHHhcC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP---EKFEI-GKKFG---IT-DF--INPATCGDKTVSQVIKEMTD 271 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~---~~~~~-~~~lg---a~-~v--i~~~~~~~~~~~~~i~~~~~ 271 (373)
.+++++|+|+|++|.+++..+...|+++|+++.++. ++.+. ++++. .. .+ .+..+ .+.+.+..
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~------~~~~~~~~- 197 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLND------TEKLKAEI- 197 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhh------hhHHHhhh-
Confidence 578999999999999999888899996799999985 44333 33332 11 11 11111 11222211
Q ss_pred CCccEEEECCCCHHH-----HHH-HHHHhccCCceEEEEcc
Q 017335 272 GGADYCFECIGLTSV-----MND-AFNSSREGWGKTVILGV 306 (373)
Q Consensus 272 ~~~d~vid~~g~~~~-----~~~-~~~~l~~~~G~~v~~G~ 306 (373)
..+|++++|+..... ... ....+.++ ..++++-.
T Consensus 198 ~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~-~~v~D~vY 237 (289)
T PRK12548 198 ASSDILVNATLVGMKPNDGETNIKDTSVFRKD-LVVADTVY 237 (289)
T ss_pred ccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCC-CEEEEecC
Confidence 257999998863210 000 13457775 77777744
No 343
>PRK06194 hypothetical protein; Provisional
Probab=95.33 E-value=0.11 Score=48.43 Aligned_cols=81 Identities=17% Similarity=0.239 Sum_probs=51.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-Hc---CCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GIT-DFINPATCGDKTVSQVIKEMT--DGG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~l---ga~-~vi~~~~~~~~~~~~~i~~~~--~~~ 273 (373)
.+.++||+|+ |++|...++.+...|+ +|++++++.++.+... ++ +.. .++..+-...+++.+.+.... .++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 9999999998888999 8999998876654432 22 332 123222211123333233221 236
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 344
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.11 Score=48.24 Aligned_cols=79 Identities=15% Similarity=0.156 Sum_probs=50.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+. -+++..+-...+++.+ +.+... +
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 568999998 9999999998888999 89999988776554432 221 1222222211233333 443322 3
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
++|+++.+.|.
T Consensus 81 ~id~vv~~ag~ 91 (280)
T PRK06914 81 RIDLLVNNAGY 91 (280)
T ss_pred CeeEEEECCcc
Confidence 78999998763
No 345
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.31 E-value=0.088 Score=48.18 Aligned_cols=78 Identities=21% Similarity=0.251 Sum_probs=50.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cCCce-E--EcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-F--INPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~~-v--i~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|+ |++|.+.++.+...|+ +|+++++++...+..++ .+.+. . .|-.+ ..++.+.+.+... +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 4689999998 9999999999888999 89999987643333332 34321 1 22222 1233333333322 3
Q ss_pred CccEEEECCC
Q 017335 273 GADYCFECIG 282 (373)
Q Consensus 273 ~~d~vid~~g 282 (373)
.+|+++.+.|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999886
No 346
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.31 E-value=0.13 Score=44.86 Aligned_cols=92 Identities=18% Similarity=0.220 Sum_probs=59.0
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc--eEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT--DFINPATCGDKTVSQVIKEMTDGGAD 275 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~--~vi~~~~~~~~~~~~~i~~~~~~~~d 275 (373)
++++||-+|+|. |..++.+++.....+|++++.+++..+.++ +.+.+ .++..+ ..+ + ...+.+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d------~~~-~--~~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGR------AED-F--QHEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecc------hhh-c--cccCCcc
Confidence 388999999876 666666666554348999999988666554 34533 233222 211 1 1123899
Q ss_pred EEEECC-C-CHHHHHHHHHHhccCCceEEEE
Q 017335 276 YCFECI-G-LTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 276 ~vid~~-g-~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+|+-.. . -...++.+.+.|+++ |+++..
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 998432 2 233567788899997 998876
No 347
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.30 E-value=0.35 Score=43.58 Aligned_cols=104 Identities=13% Similarity=0.154 Sum_probs=61.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh-HHHH----HHHcCCc-eEEcCCCCCCccHHHHHHHhc--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEI----GKKFGIT-DFINPATCGDKTVSQVIKEMT--DG 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~-~~~~----~~~lga~-~vi~~~~~~~~~~~~~i~~~~--~~ 272 (373)
++.++||+|+ |++|...++.+...|+ +|+.+.++.+ +.+. ++..+.. +.+..+-....++.+.+.+.. .+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5689999998 9999999999999999 7777665432 2222 2233421 222222211123333333322 13
Q ss_pred CccEEEECCCCHH-------------------------HHHHHHHHhccCCceEEEEccc
Q 017335 273 GADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 273 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
++|++|.+.|... .+..+++.++.+ |+++.++..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 7899999887410 123445556675 899888753
No 348
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.29 E-value=0.11 Score=42.85 Aligned_cols=97 Identities=23% Similarity=0.231 Sum_probs=57.4
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------HHHHH----HHcCC-ceEEcCCCCC
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------KFEIG----KKFGI-TDFINPATCG 258 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-------------------~~~~~----~~lga-~~vi~~~~~~ 258 (373)
..+|+|+|+|++|...+..+-..|+.++..+|.+.- |.+.+ +++.. .++.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 468999999999999999999999989999887432 22222 22221 12211111
Q ss_pred CccH-HHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCce-EEEEc
Q 017335 259 DKTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGK-TVILG 305 (373)
Q Consensus 259 ~~~~-~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~-~v~~G 305 (373)
.+ .+.+.++. .++|+||+|+........+.+.++.. +. ++..+
T Consensus 80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~~ 124 (135)
T PF00899_consen 80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDAG 124 (135)
T ss_dssp --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEEE
T ss_pred --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence 11 12222222 27899999999877555555666664 54 44433
No 349
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=95.26 E-value=0.32 Score=43.44 Aligned_cols=100 Identities=18% Similarity=0.181 Sum_probs=63.6
Q ss_pred HhC-CCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC-CC
Q 017335 197 VAG-VEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD-GG 273 (373)
Q Consensus 197 ~~~-~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~-~~ 273 (373)
..+ ++++++||=+|+|+ |..+..+++..+. .+|+++|.++.. ...-.++++.+- .+....+.+.+... +.
T Consensus 45 ~~~~~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~-----~~~~v~~i~~D~-~~~~~~~~i~~~~~~~~ 117 (209)
T PRK11188 45 SDKLFKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD-----PIVGVDFLQGDF-RDELVLKALLERVGDSK 117 (209)
T ss_pred HhccCCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc-----CCCCcEEEecCC-CChHHHHHHHHHhCCCC
Confidence 344 68899999999876 6677777777653 389999987621 111123444443 22333444544433 38
Q ss_pred ccEEEECC-----CC------------HHHHHHHHHHhccCCceEEEE
Q 017335 274 ADYCFECI-----GL------------TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 274 ~d~vid~~-----g~------------~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+|+|+... |. ...++.+.+.|++| |+++..
T Consensus 118 ~D~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~ 164 (209)
T PRK11188 118 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK 164 (209)
T ss_pred CCEEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 99999533 22 12467888999997 998874
No 350
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.23 E-value=0.11 Score=47.48 Aligned_cols=80 Identities=14% Similarity=0.214 Sum_probs=50.1
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc--eEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 202 ~~~~VlI~G~G---~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~--~vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
.++++||+|++ ++|.+.++.+...|+ +|+.+.++++..+.++++... +.+.-+-...++..+.+.+... +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999874 899999988888999 899998875444444444211 1222221112333333333322 479
Q ss_pred cEEEECCC
Q 017335 275 DYCFECIG 282 (373)
Q Consensus 275 d~vid~~g 282 (373)
|+++++.|
T Consensus 85 D~lv~nAg 92 (252)
T PRK06079 85 DGIVHAIA 92 (252)
T ss_pred CEEEEccc
Confidence 99999877
No 351
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.23 E-value=0.16 Score=45.57 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=31.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~ 236 (373)
...+|+|+|+|++|...++.+...|..++..+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999889999977
No 352
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.23 E-value=0.14 Score=46.76 Aligned_cols=81 Identities=25% Similarity=0.332 Sum_probs=51.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ..+.. ..+..+-....++.+.+..... +.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4679999998 8999999998888999 9999999877654432 22322 1222222111233333333221 37
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++.+.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 353
>PRK09242 tropinone reductase; Provisional
Probab=95.23 E-value=0.13 Score=47.03 Aligned_cols=81 Identities=16% Similarity=0.153 Sum_probs=52.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c-----CCc-eEEcCCCCCCccHHHHHHHhc--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFINPATCGDKTVSQVIKEMT--D 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l-----ga~-~vi~~~~~~~~~~~~~i~~~~--~ 271 (373)
.++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ + +.+ ..+..+-....++...+.+.. -
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4789999998 8999999999999999 89999998877554432 1 221 122112101123333333322 1
Q ss_pred CCccEEEECCCC
Q 017335 272 GGADYCFECIGL 283 (373)
Q Consensus 272 ~~~d~vid~~g~ 283 (373)
+++|+++.+.|.
T Consensus 87 g~id~li~~ag~ 98 (257)
T PRK09242 87 DGLHILVNNAGG 98 (257)
T ss_pred CCCCEEEECCCC
Confidence 379999999874
No 354
>PLN02253 xanthoxin dehydrogenase
Probab=95.23 E-value=0.1 Score=48.39 Aligned_cols=81 Identities=20% Similarity=0.205 Sum_probs=50.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCC---ceEEcCCCCCCccHHHHHHHhcC--CCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI---TDFINPATCGDKTVSQVIKEMTD--GGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga---~~vi~~~~~~~~~~~~~i~~~~~--~~~ 274 (373)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. .++. .+.+..+-...+++.+.+..... +++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 3679999998 8999999888888899 9999998776554432 3321 12222221111233333333222 379
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|+++++.|.
T Consensus 96 d~li~~Ag~ 104 (280)
T PLN02253 96 DIMVNNAGL 104 (280)
T ss_pred CEEEECCCc
Confidence 999998763
No 355
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.22 E-value=0.12 Score=49.23 Aligned_cols=78 Identities=21% Similarity=0.178 Sum_probs=50.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcC---Cc-eEE--cCCCCCCccHHHHHHHhc--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---IT-DFI--NPATCGDKTVSQVIKEMT--D 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lg---a~-~vi--~~~~~~~~~~~~~i~~~~--~ 271 (373)
.+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. ++. .. .++ |-.+ ..++.+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999998 9999999998888898 9999999887765543 232 11 122 2222 122222233321 2
Q ss_pred CCccEEEECCC
Q 017335 272 GGADYCFECIG 282 (373)
Q Consensus 272 ~~~d~vid~~g 282 (373)
+.+|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 36999999877
No 356
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.20 E-value=0.12 Score=49.14 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=32.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~ 238 (373)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.+
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK 170 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence 57899999999999999999999999 9999987653
No 357
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.20 E-value=0.13 Score=46.89 Aligned_cols=80 Identities=21% Similarity=0.275 Sum_probs=51.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.+|||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+.. +.+..+-..+.++.+.+..... ++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3579999998 9999999998888899 9999999887655442 22322 2222222112233333333221 37
Q ss_pred ccEEEECCC
Q 017335 274 ADYCFECIG 282 (373)
Q Consensus 274 ~d~vid~~g 282 (373)
+|++|.+.+
T Consensus 82 ~d~vi~~a~ 90 (258)
T PRK12429 82 VDILVNNAG 90 (258)
T ss_pred CCEEEECCC
Confidence 899998876
No 358
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.19 E-value=0.2 Score=46.35 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=67.4
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHHc-C------Cc--eEEcCCCCCCccHHHH
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKF-G------IT--DFINPATCGDKTVSQV 265 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~l-g------a~--~vi~~~~~~~~~~~~~ 265 (373)
+...++++++||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++- . .. .++..+. .++
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~l--- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TDL--- 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---ccC---
Confidence 445678999999999876 6677778877653 2899999999988887532 1 11 1222221 111
Q ss_pred HHHhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEccc
Q 017335 266 IKEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 266 i~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
...++.||+|+-..+ ....+.++.+.|++| |+++..-..
T Consensus 140 --p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~ 184 (261)
T PLN02233 140 --PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFN 184 (261)
T ss_pred --CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECC
Confidence 112237999985432 234688999999997 999877543
No 359
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.18 E-value=0.16 Score=47.45 Aligned_cols=87 Identities=15% Similarity=0.217 Sum_probs=57.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCCH
Q 017335 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 284 (373)
Q Consensus 205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 284 (373)
+|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|..... . .+. +.+ ..+|+||.|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence 58899999999998888888898 999999999998888877742111 1 111 111 2678888888855
Q ss_pred HH---HHHHHHHhccCCceEEEEc
Q 017335 285 SV---MNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 285 ~~---~~~~~~~l~~~~G~~v~~G 305 (373)
.. +..+...++++ ..+.+++
T Consensus 69 ~~~~~~~~l~~~l~~~-~ii~d~~ 91 (279)
T PRK07417 69 LLLPPSEQLIPALPPE-AIVTDVG 91 (279)
T ss_pred HHHHHHHHHHHhCCCC-cEEEeCc
Confidence 42 22333344453 4555554
No 360
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.18 E-value=0.23 Score=44.97 Aligned_cols=35 Identities=26% Similarity=0.248 Sum_probs=31.1
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
..+|+|+|+|++|..++..+..+|..++..+|.+.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 57999999999999999999999998998886543
No 361
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.17 E-value=0.18 Score=44.65 Aligned_cols=99 Identities=15% Similarity=0.116 Sum_probs=59.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH-----------------------HHHHHHcCCceEEcCCCCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-----------------------FEIGKKFGITDFINPATCG 258 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~-----------------------~~~~~~lga~~vi~~~~~~ 258 (373)
.+.+|+|+|+|++|...+..+-.+|.+++..+|.+.-. .+.++++..+-.++...
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~-- 97 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT-- 97 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe--
Confidence 35789999999999999999999999899998865211 12233444332222221
Q ss_pred CccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCc-eEEEEc
Q 017335 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG-KTVILG 305 (373)
Q Consensus 259 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~G 305 (373)
..+.+...+.. .++|+|++|.........+-+..... + .++..+
T Consensus 98 -~~~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~-~ip~i~~~ 142 (197)
T cd01492 98 -DDISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL-GVKFYATG 142 (197)
T ss_pred -cCccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence 11111111221 27999999988766544555555553 4 344444
No 362
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.13 E-value=0.35 Score=47.17 Aligned_cols=83 Identities=22% Similarity=0.262 Sum_probs=49.9
Q ss_pred CCCCEEEEECC-ChHHHH--HHHHHHHCCCCeEEEEcCChh--H--------------HHHHHHcCCc-eEEcCCCCCCc
Q 017335 201 EVGSTVAIFGL-GAVGLA--VAEGARLNRASKIIGVDINPE--K--------------FEIGKKFGIT-DFINPATCGDK 260 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~--a~~la~~~G~~~Vi~~~~~~~--~--------------~~~~~~lga~-~vi~~~~~~~~ 260 (373)
..++++||+|+ +++|++ .++.+ ..|+ +|+++....+ + .+.+++.|.. ..++.+-..++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 45689999998 789999 55666 7899 7777763221 1 2234556643 23433332223
Q ss_pred cHHHHHHHhcC--CCccEEEECCCCHH
Q 017335 261 TVSQVIKEMTD--GGADYCFECIGLTS 285 (373)
Q Consensus 261 ~~~~~i~~~~~--~~~d~vid~~g~~~ 285 (373)
+..+.+.+... |++|+++++.+.+.
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 33333333322 47999999999764
No 363
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.13 Score=47.88 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. ..|... .+..+-....++.+.+.+... +.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 8999999999989999 8999998876655432 234322 222221111233333333221 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|++.|.
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 364
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.13 Score=46.84 Aligned_cols=80 Identities=15% Similarity=0.203 Sum_probs=50.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCC--ceEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--TDFINPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga--~~vi~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ +.. -+++..+-...+++...+.+... +++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 568999998 8999998888888898 89999998877655432 321 12222222111223333333221 36899
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
++.+.|.
T Consensus 81 vi~~ag~ 87 (257)
T PRK07074 81 LVANAGA 87 (257)
T ss_pred EEECCCC
Confidence 9998874
No 365
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.11 E-value=0.075 Score=47.19 Aligned_cols=35 Identities=40% Similarity=0.459 Sum_probs=31.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~ 236 (373)
...+|+|+|+|++|...++.+...|..+++.+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35789999999999999999999999889999987
No 366
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.16 Score=46.59 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=47.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
.++++||+|+ |++|...++.+...|+ +|+++++++ ++.+... .+....+..+- .+. +.+.+.. +.+|++|+
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~---~~~-~~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWEC---GKE-ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeC---CCH-HHHHHhc-CCCCEEEE
Confidence 3689999998 8999999999989999 899988876 2222211 12122222221 111 1233322 36999999
Q ss_pred CCCC
Q 017335 280 CIGL 283 (373)
Q Consensus 280 ~~g~ 283 (373)
+.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9874
No 367
>PLN00203 glutamyl-tRNA reductase
Probab=95.10 E-value=0.13 Score=52.24 Aligned_cols=97 Identities=15% Similarity=0.207 Sum_probs=61.7
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 281 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 281 (373)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+.+ ++...+. .. .+. .+.+.. ..+|+||.|+
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~~-----~~~-dl~~al-~~aDVVIsAT 337 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-YK-----PLD-EMLACA-AEADVVFTST 337 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-ee-----cHh-hHHHHH-hcCCEEEEcc
Confidence 6899999999999999999999998789999999888766653 5321111 11 111 111111 2789999998
Q ss_pred CCHH--HHHHHHHHhcc----CCc--eEEEEccc
Q 017335 282 GLTS--VMNDAFNSSRE----GWG--KTVILGVE 307 (373)
Q Consensus 282 g~~~--~~~~~~~~l~~----~~G--~~v~~G~~ 307 (373)
+.+. .....++.+.+ ++. .+++++.+
T Consensus 338 ~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 338 SSETPLFLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred CCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 7644 12233333321 102 47778774
No 368
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.09 E-value=0.13 Score=46.42 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=50.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.+|||+|+ |.+|...+..+...|+ +|++++++.++...+ ++.+.. .++..+-....++.+.+.+... +.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999998 9999999988888899 999999986554332 223321 2222222111223333333221 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++.+.+.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999988754
No 369
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.08 E-value=0.18 Score=47.31 Aligned_cols=83 Identities=16% Similarity=0.182 Sum_probs=60.4
Q ss_pred HHHhC-CCCCCEEEEECCCh-HHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC
Q 017335 195 WKVAG-VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG 272 (373)
Q Consensus 195 ~~~~~-~~~~~~VlI~G~G~-vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~ 272 (373)
++..+ --.|++|+|+|.|. +|...+.++...|+ +|.++.+.. +++.+.+ .
T Consensus 150 L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~-----~ 201 (283)
T PRK14192 150 LKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV-----K 201 (283)
T ss_pred HHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh-----c
Confidence 33434 35789999999976 99999999999999 888887521 1121111 2
Q ss_pred CccEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335 273 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (373)
Q Consensus 273 ~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 308 (373)
.+|+|++++|.+..+. .+.++++ ..++++|..+
T Consensus 202 ~aDIvI~AtG~~~~v~--~~~lk~g-avViDvg~n~ 234 (283)
T PRK14192 202 QADIIVGAVGKPELIK--KDWIKQG-AVVVDAGFHP 234 (283)
T ss_pred cCCEEEEccCCCCcCC--HHHcCCC-CEEEEEEEee
Confidence 7899999998766333 3668997 9999999754
No 370
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.06 E-value=0.16 Score=46.46 Aligned_cols=80 Identities=20% Similarity=0.324 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCc-eEEcCCCCCCccHHHHHHHhc--CCCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMT--DGGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~-~vi~~~~~~~~~~~~~i~~~~--~~~~d~ 276 (373)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+.+ ++.. +.+..+-....++.+.+.+.. .+.+|+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678999998 9999999999998999 99999999887665543 3321 222222111123333333322 136899
Q ss_pred EEECCC
Q 017335 277 CFECIG 282 (373)
Q Consensus 277 vid~~g 282 (373)
++.+.|
T Consensus 84 li~~ag 89 (257)
T PRK07067 84 LFNNAA 89 (257)
T ss_pred EEECCC
Confidence 998876
No 371
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.16 Score=45.94 Aligned_cols=80 Identities=9% Similarity=0.048 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--C-
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--G- 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~- 272 (373)
.+++++|+|+ +++|.+.+.-+...|+ +|+.+.+++++.+.+. +.+.+. .+.-+....+++.+.+.+... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 7999998888888999 8999999887765442 334322 222221112333333333221 3
Q ss_pred CccEEEECCC
Q 017335 273 GADYCFECIG 282 (373)
Q Consensus 273 ~~d~vid~~g 282 (373)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6999999886
No 372
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.15 Score=46.76 Aligned_cols=81 Identities=23% Similarity=0.308 Sum_probs=50.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH---cCCc-eEEcCCCCCCccHHHHHHHhc--CCCc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFINPATCGDKTVSQVIKEMT--DGGA 274 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~---lga~-~vi~~~~~~~~~~~~~i~~~~--~~~~ 274 (373)
.+.+++|+|+ |++|...+..+...|+ +|+.++++++..+.+++ .+.. ..+..+-....++.+.+.+.. .+.+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999998 9999999998888999 89999988754444332 2322 122222101122222222221 1378
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999998873
No 373
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.03 E-value=0.27 Score=45.71 Aligned_cols=96 Identities=21% Similarity=0.199 Sum_probs=61.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-C---------ceEEcCCCCCCccHHHHHHHhc
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-I---------TDFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a---------~~vi~~~~~~~~~~~~~i~~~~ 270 (373)
...++||++|+|. |..+..+++.....+|.+++.+++-.+.+++.- . -+++. .+..+.+++ .
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~------~D~~~~l~~-~ 142 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQI------DDGFKFLAD-T 142 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEE------CchHHHHHh-C
Confidence 3456999999876 555666777665668999999988777776521 0 01221 123333332 2
Q ss_pred CCCccEEE-ECC---C------CHHHHHHHHHHhccCCceEEEEc
Q 017335 271 DGGADYCF-ECI---G------LTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 271 ~~~~d~vi-d~~---g------~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
.+.+|+|+ |.. + ....++.+.+.|+++ |.++...
T Consensus 143 ~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 143 ENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred CCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 34899998 443 1 223467889999997 9998764
No 374
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=95.02 E-value=0.26 Score=49.14 Aligned_cols=101 Identities=12% Similarity=0.182 Sum_probs=65.5
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eE--EcCCCCCCccHHHHHH
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DF--INPATCGDKTVSQVIK 267 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~v--i~~~~~~~~~~~~~i~ 267 (373)
.....+++|++||-+|+|+ |-.+..+++.++..+|++++.++++.+.++ ++|.. .+ .+.+. .+. .
T Consensus 231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~ 302 (426)
T TIGR00563 231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----S 302 (426)
T ss_pred HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----c
Confidence 3445788999999998865 555556666665339999999999877664 46654 22 22221 111 0
Q ss_pred Hh-cCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEE
Q 017335 268 EM-TDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 268 ~~-~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~ 304 (373)
.. ..+.||.|| | |+|. ...+..+++.|++| |+++..
T Consensus 303 ~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvys 367 (426)
T TIGR00563 303 QWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYA 367 (426)
T ss_pred ccccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 01 123799998 4 5552 13577889999997 998855
No 375
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.01 E-value=0.17 Score=46.17 Aligned_cols=81 Identities=15% Similarity=0.244 Sum_probs=52.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+.. ..+..+-..+.++.+.+.+... +.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 5789999998 8999999988888899 999999987665443 233421 2222221112333333333322 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999988874
No 376
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.99 E-value=0.12 Score=46.58 Aligned_cols=103 Identities=19% Similarity=0.343 Sum_probs=66.7
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHH
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVI 266 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i 266 (373)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ .+.+ .++..+. .++
T Consensus 37 ~l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~---- 108 (231)
T TIGR02752 37 TMKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA---MEL---- 108 (231)
T ss_pred HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech---hcC----
Confidence 34456778899999999976 6677788877642 289999999988777653 2222 1222211 110
Q ss_pred HHhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335 267 KEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 267 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
...++.+|+|+-+.. ....+..+.+.|++| |+++..-.
T Consensus 109 -~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 109 -PFDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred -CCCCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 122237999985322 123577889999997 99987643
No 377
>PRK06720 hypothetical protein; Provisional
Probab=94.99 E-value=0.21 Score=43.06 Aligned_cols=80 Identities=21% Similarity=0.157 Sum_probs=49.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~ 273 (373)
.+.+++|.|+ +++|...+..+...|+ +|+.++++++..+.+ ++.+.. ..+..+-....++.+.+.+.. -++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 7899998888888898 899999887655332 223432 122222211122222222211 136
Q ss_pred ccEEEECCC
Q 017335 274 ADYCFECIG 282 (373)
Q Consensus 274 ~d~vid~~g 282 (373)
+|+++++.|
T Consensus 94 iDilVnnAG 102 (169)
T PRK06720 94 IDMLFQNAG 102 (169)
T ss_pred CCEEEECCC
Confidence 888888877
No 378
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.068 Score=49.25 Aligned_cols=77 Identities=19% Similarity=0.316 Sum_probs=50.5
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcC--CCccEEEE
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD--GGADYCFE 279 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~--~~~d~vid 279 (373)
+.+++|+|+ |++|...++.+...|+ +|++++++.++.+... +.. ++..+-...+++.+.+..... +.+|++|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~-~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVE-LLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCe-eEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 568999998 9999999988888899 8999998876554321 222 222221112334444444322 37899999
Q ss_pred CCCC
Q 017335 280 CIGL 283 (373)
Q Consensus 280 ~~g~ 283 (373)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9884
No 379
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.16 Score=46.31 Aligned_cols=81 Identities=14% Similarity=0.207 Sum_probs=50.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-HH-H---HHHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FE-I---GKKFGIT-DFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~-~---~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.+.++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+ . +++.+.. ..+..+-....++.+.+.+... +
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4679999998 8999999999999999 89998876532 22 2 2233422 2222222112333333333222 3
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
.+|++|.+.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 380
>PRK08328 hypothetical protein; Provisional
Probab=94.98 E-value=0.13 Score=46.75 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=31.7
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
.+.+|+|+|+|++|..++..+...|.+++..+|.+.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 357899999999999999999999998999988543
No 381
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.98 E-value=0.15 Score=46.63 Aligned_cols=81 Identities=21% Similarity=0.300 Sum_probs=50.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH--HHHHHHcCCce-EEcCCCCCCccHHHHHHHhc--CCCcc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITD-FINPATCGDKTVSQVIKEMT--DGGAD 275 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~--~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~--~~~~d 275 (373)
.++++||+|+ +++|.+.++.+...|+ +|+++++++.. .+.+++.+.+. ++..+-...+++.+.+.+.. .+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999998 8999999999999999 89888775432 22334445321 22222211233333333322 23799
Q ss_pred EEEECCCC
Q 017335 276 YCFECIGL 283 (373)
Q Consensus 276 ~vid~~g~ 283 (373)
+++++.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99998773
No 382
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.32 Score=45.59 Aligned_cols=104 Identities=18% Similarity=0.173 Sum_probs=60.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH-HHH----HHHcCCce-EEcCCCCCCccHHHHHHHhcC--
Q 017335 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEI----GKKFGITD-FINPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~-~~~----~~~lga~~-vi~~~~~~~~~~~~~i~~~~~-- 271 (373)
-.+.++||+|+ |.+|...+..+...|+ +|+.+.+++++ .+. ++..|... ++..+-....++.+.+.+...
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999998 8999998888888899 88888776432 221 22234322 222222111223233333221
Q ss_pred CCccEEEECCCCHH--------------------------HHHHHHHHhccCCceEEEEcc
Q 017335 272 GGADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 272 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~G~ 306 (373)
+++|++|.+.|... ....+++.++++ |+++.++.
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~-g~iV~isS 182 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQG-SAIINTGS 182 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhC-CeEEEEec
Confidence 37899998876310 122344556676 88888875
No 383
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=94.97 E-value=0.084 Score=48.05 Aligned_cols=105 Identities=27% Similarity=0.446 Sum_probs=64.4
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHH
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIK 267 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~ 267 (373)
.+....++|++||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++ .+.. +.+..+. +++
T Consensus 40 ~~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l----- 110 (233)
T PF01209_consen 40 IKLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL----- 110 (233)
T ss_dssp HHHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB------
T ss_pred HhccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh-----
Confidence 4456788999999998876 7788888888763 299999999998888764 2321 2222222 221
Q ss_pred HhcCCCccEEEECCCC------HHHHHHHHHHhccCCceEEEEcccCC
Q 017335 268 EMTDGGADYCFECIGL------TSVMNDAFNSSREGWGKTVILGVEMH 309 (373)
Q Consensus 268 ~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~G~~~~ 309 (373)
...++.||+|.-+.|- ...+.++.+.|+|| |+++.+.....
T Consensus 111 p~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p 157 (233)
T PF01209_consen 111 PFPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKP 157 (233)
T ss_dssp -S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-
T ss_pred cCCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCC
Confidence 1222379999976653 34688999999997 99988876443
No 384
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.97 E-value=0.067 Score=47.69 Aligned_cols=103 Identities=21% Similarity=0.259 Sum_probs=67.0
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHhc-
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEMT- 270 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~~- 270 (373)
.....+||-+|.+. |..++.+|+.+.- .+|+.++.+++..+.+++ .|.. +++..+. .++.+.+....
T Consensus 43 ~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda---~~~l~~l~~~~~ 118 (205)
T PF01596_consen 43 LTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDA---LEVLPELANDGE 118 (205)
T ss_dssp HHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-H---HHHHHHHHHTTT
T ss_pred hcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEecc---HhhHHHHHhccC
Confidence 44567999999865 7888888987642 299999999998888753 4532 2443332 23333333222
Q ss_pred CCCccEEE-ECCCC--HHHHHHHHHHhccCCceEEEEccc
Q 017335 271 DGGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 271 ~~~~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
.+.||.|| |+-=. ...++.+++.|++| |.++.=...
T Consensus 119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l 157 (205)
T PF01596_consen 119 EGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL 157 (205)
T ss_dssp TTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred CCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence 23799999 55432 22477888999997 888866543
No 385
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.96 E-value=0.16 Score=45.80 Aligned_cols=81 Identities=17% Similarity=0.268 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.+++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ +..+.. +++..+-....++.+.+++... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999998 8999999998888999 999999987765443 222322 2222222112333333433322 37
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998764
No 386
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.96 E-value=0.16 Score=46.43 Aligned_cols=81 Identities=17% Similarity=0.134 Sum_probs=51.7
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.+|||+|+ |++|...+..+...|+ +|+.+++++++.+.+. +.+.+ +++..+-....++.+.+..... ++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 8999999998888999 8988888877654432 23322 2222222111223333333222 37
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++.+.|.
T Consensus 89 ~d~li~~ag~ 98 (255)
T PRK06113 89 VDILVNNAGG 98 (255)
T ss_pred CCEEEECCCC
Confidence 8999998873
No 387
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.96 E-value=0.13 Score=43.49 Aligned_cols=80 Identities=24% Similarity=0.250 Sum_probs=49.4
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC--hhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN--PEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG 273 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~--~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~ 273 (373)
+++||+|+ +++|+..++.+-..|..+|+.+.++ .++.+.+ +..+.. .++..+-...+++...+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899998 8999998877777777688889988 4443333 333432 233222211233444444433 237
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998885
No 388
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.96 E-value=0.51 Score=42.69 Aligned_cols=103 Identities=19% Similarity=0.195 Sum_probs=59.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHH----HHHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~----~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
+.++||+|+ |.+|...+.-+...|+ +|+.+.+ +.++.. .+++.+.. +.+..+-..+.++...+.+... +.
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 579999998 8999998888888999 7766553 323222 22333432 2222221111223223333221 37
Q ss_pred ccEEEECCCC----------HH---------------HHHHHHHHhccCCceEEEEccc
Q 017335 274 ADYCFECIGL----------TS---------------VMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 274 ~d~vid~~g~----------~~---------------~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
+|++|.+.|. .. ..+.+.+.++.. |+++.++..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~ 142 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASV 142 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcch
Confidence 8999998873 10 133455666776 899988763
No 389
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=94.94 E-value=0.15 Score=40.46 Aligned_cols=93 Identities=25% Similarity=0.388 Sum_probs=58.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCC---ceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFINPATCGDKTVSQVIKEMTDGGAD 275 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga---~~vi~~~~~~~~~~~~~i~~~~~~~~d 275 (373)
|.+||-.|+|. |...+.+++.. ..++++++.+++..+.++. .+. ..++. .++.+.......+.+|
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~------~D~~~~~~~~~~~~~D 72 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV------GDARDLPEPLPDGKFD 72 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE------SHHHHHHHTCTTT-EE
T ss_pred CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE------CchhhchhhccCceeE
Confidence 56788887754 55555555555 3499999999998887764 232 12332 3444433334445899
Q ss_pred EEEECCC-C-------------HHHHHHHHHHhccCCceEEEE
Q 017335 276 YCFECIG-L-------------TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 276 ~vid~~g-~-------------~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+|+-... . ...+..+.+.|+++ |.++.+
T Consensus 73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 9995322 1 23478899999997 998765
No 390
>PRK06398 aldose dehydrogenase; Validated
Probab=94.94 E-value=0.085 Score=48.47 Aligned_cols=74 Identities=16% Similarity=0.248 Sum_probs=48.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-EEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~v 277 (373)
.++++||+|+ |++|.+.+..+...|+ +|+.+++++++... ... ..|-.+ +.++.+.+.+... +.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~~-----~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYND-----VDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccCc-----eEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 8999999999999999 99999887654321 111 122222 1233333333322 368999
Q ss_pred EECCCC
Q 017335 278 FECIGL 283 (373)
Q Consensus 278 id~~g~ 283 (373)
|++.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998773
No 391
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.93 E-value=0.31 Score=37.33 Aligned_cols=85 Identities=18% Similarity=0.285 Sum_probs=55.6
Q ss_pred EEEEECCChHHHHHHHHHHHCC---CCeEE-EEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 205 TVAIFGLGAVGLAVAEGARLNR---ASKII-GVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 205 ~VlI~G~G~vG~~a~~la~~~G---~~~Vi-~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
+|.|+|+|.+|.+.+.-+...| . +|+ ++++++++.+.++ +++.. +.. .+..+.++ ..|+||-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~------~~~~~~~~-----~advvil 67 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA------DDNEEAAQ-----EADVVIL 67 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES------EEHHHHHH-----HTSEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc------CChHHhhc-----cCCEEEE
Confidence 5778899999999999988888 6 888 4499999888875 45543 321 12333332 5899999
Q ss_pred CCCCHHHHHHHHHHh---ccCCceEEEE
Q 017335 280 CIGLTSVMNDAFNSS---REGWGKTVIL 304 (373)
Q Consensus 280 ~~g~~~~~~~~~~~l---~~~~G~~v~~ 304 (373)
|+.... +...++.+ .++ ..++.+
T Consensus 68 av~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 999766 44444443 443 455544
No 392
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.92 E-value=0.18 Score=46.60 Aligned_cols=80 Identities=14% Similarity=0.180 Sum_probs=48.3
Q ss_pred CCCEEEEECCC---hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~G---~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|++ ++|.+.++.+...|+ +|+.+++++...+.+++ .+....+.-+-....++.+.+.+... +
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 47899999983 799998888888999 88888876422222222 23222232222112333333333322 3
Q ss_pred CccEEEECCC
Q 017335 273 GADYCFECIG 282 (373)
Q Consensus 273 ~~d~vid~~g 282 (373)
.+|+++++.|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 6899999887
No 393
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.92 E-value=0.16 Score=47.11 Aligned_cols=81 Identities=16% Similarity=0.247 Sum_probs=49.5
Q ss_pred CCCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcC--
Q 017335 201 EVGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 201 ~~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~~---~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~-- 271 (373)
-.++++||+|+ +++|++.++.+...|+ +|+.+.+++ ++.+.+ ++++....+..+-...++..+.+.+...
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 35789999987 4899999988888999 888887664 233333 3345322222222112333333333322
Q ss_pred CCccEEEECCC
Q 017335 272 GGADYCFECIG 282 (373)
Q Consensus 272 ~~~d~vid~~g 282 (373)
+.+|+++++.|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 37899999876
No 394
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.12 Score=47.03 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=48.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTD--GGADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~--~~~d~v 277 (373)
.++++||+|+ |++|...++.+...|+ +|+.+++++++. ..+. .+++..+-....++.+.+..... +.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET----VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh----hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4789999998 8999999998888999 899999887651 1221 12222221011233333333221 378999
Q ss_pred EECCCC
Q 017335 278 FECIGL 283 (373)
Q Consensus 278 id~~g~ 283 (373)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 998773
No 395
>PRK08264 short chain dehydrogenase; Validated
Probab=94.89 E-value=0.19 Score=45.24 Aligned_cols=77 Identities=17% Similarity=0.214 Sum_probs=49.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
.+.++||+|+ |.+|...++.+...|+.+|+++++++++.+. .+. .+++..+-....++.+.+.. . +.+|+||.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~-~-~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEA-A-SDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHh-c-CCCCEEEE
Confidence 4678999998 9999999999988998689999988766543 221 12222222011222222222 1 26899999
Q ss_pred CCCC
Q 017335 280 CIGL 283 (373)
Q Consensus 280 ~~g~ 283 (373)
+.|.
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 8876
No 396
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=94.84 E-value=0.13 Score=47.20 Aligned_cols=97 Identities=20% Similarity=0.190 Sum_probs=64.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC----------ceEEcCCCCCCccHHHHHHHhc
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI----------TDFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga----------~~vi~~~~~~~~~~~~~i~~~~ 270 (373)
...++|||+|+|. |..+-++++.....+|.+++.+++-.+.++++-. -+++.. |-.+-+++..
T Consensus 75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~~------Dg~~~l~~~~ 147 (246)
T PF01564_consen 75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIIIG------DGRKFLKETQ 147 (246)
T ss_dssp SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEES------THHHHHHTSS
T ss_pred CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEEh------hhHHHHHhcc
Confidence 3688999998766 5567788887766799999999998888876321 123322 3334444433
Q ss_pred CCCccEEE-ECCC---------CHHHHHHHHHHhccCCceEEEEc
Q 017335 271 DGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 271 ~~~~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
...+|+|+ |... +...++.+.+.|+++ |.++.-.
T Consensus 148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 148 EEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp ST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 22799999 6554 245688999999997 9988765
No 397
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.21 Score=44.78 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=49.1
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceE-EcCCCCCCccHHHHHHHhcCCCccEEEECC
Q 017335 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYCFECI 281 (373)
Q Consensus 205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~v-i~~~~~~~~~~~~~i~~~~~~~~d~vid~~ 281 (373)
+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+ +.++.+.+... .+.+|+++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLF-PHHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHH-hhcCcEEEECC
Confidence 5899988 8999999998888999 999999988877655 33444322 22222 12333333322 23689999875
Q ss_pred C
Q 017335 282 G 282 (373)
Q Consensus 282 g 282 (373)
|
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 4
No 398
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.84 E-value=0.31 Score=47.49 Aligned_cols=44 Identities=34% Similarity=0.359 Sum_probs=36.8
Q ss_pred HHHHhCC-CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335 194 AWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 238 (373)
Q Consensus 194 ~~~~~~~-~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~ 238 (373)
+.+..+. -.|.+|.|.|.|.+|..+++.+...|+ +|++++.+..
T Consensus 197 a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 197 ALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred HHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 3444454 489999999999999999999998899 8988887665
No 399
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.82 E-value=0.36 Score=43.49 Aligned_cols=100 Identities=15% Similarity=0.128 Sum_probs=62.2
Q ss_pred hCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCce---------EEcCCCCCCcc-HHHHH
Q 017335 198 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITD---------FINPATCGDKT-VSQVI 266 (373)
Q Consensus 198 ~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~---------vi~~~~~~~~~-~~~~i 266 (373)
..+.++.+||+.|+|. |.-++.+|. .|+ .|++++.++...+.+. +.+... +..... -+ +...+
T Consensus 33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~---v~~~~~D~ 106 (218)
T PRK13255 33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE---ITIYCGDF 106 (218)
T ss_pred hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc---eEEEECcc
Confidence 3456788999999976 777777775 799 9999999998877653 233210 000000 00 00111
Q ss_pred HHhc---CCCccEEEECCC--------CHHHHHHHHHHhccCCceEEEE
Q 017335 267 KEMT---DGGADYCFECIG--------LTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 267 ~~~~---~~~~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
.++. .+.||.|+|..- ....+..+.++|++| |+++++
T Consensus 107 ~~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 107 FALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred cCCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1121 126899998653 233578889999997 975543
No 400
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.82 E-value=0.47 Score=43.12 Aligned_cols=104 Identities=16% Similarity=0.185 Sum_probs=60.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc-CChhHHHHH----HHcCCce-EE--cCCCC-CCccHHHHHHHh--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG----KKFGITD-FI--NPATC-GDKTVSQVIKEM-- 269 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~----~~lga~~-vi--~~~~~-~~~~~~~~i~~~-- 269 (373)
.+.++||+|+ |++|.+.++.+...|+ +|+.+. +++++.+.+ +..+... .+ |-.+. ....+.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999998 8999999999999999 787764 444443322 2223221 11 11110 001222233321
Q ss_pred --cC-CCccEEEECCCCHH-------------------------HHHHHHHHhccCCceEEEEccc
Q 017335 270 --TD-GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 270 --~~-~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
.+ +++|+++++.|... ....+++.++.. |+++.++..
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~ 146 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSA 146 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCc
Confidence 11 26999999877310 122455666776 999988764
No 401
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.81 E-value=0.16 Score=49.78 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=32.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~ 236 (373)
.+.+|+|+|+|++|..++..+...|++++..++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999999999987
No 402
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.80 E-value=0.19 Score=45.92 Aligned_cols=81 Identities=17% Similarity=0.238 Sum_probs=49.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCcc
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD 275 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d 275 (373)
.+.++||+|+ |++|.+.++.+...|+ +|+.+++.+. ..+.+++.+.. +.+..+-...+++.+.+.+... +.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999998 8999999999999999 8888876432 22333344422 2222222111233333333222 3789
Q ss_pred EEEECCCC
Q 017335 276 YCFECIGL 283 (373)
Q Consensus 276 ~vid~~g~ 283 (373)
+++++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99998874
No 403
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.80 E-value=0.18 Score=45.83 Aligned_cols=78 Identities=14% Similarity=0.187 Sum_probs=51.0
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCce-EEcCCCCCCccHHHHHHHhcC--CCccEEEE
Q 017335 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FINPATCGDKTVSQVIKEMTD--GGADYCFE 279 (373)
Q Consensus 205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~vid 279 (373)
+|+|+|+ |++|.+.+..+...|+ +|+++++++++.+.+.. ++... .+..+-....++.+.+.+... +++|+++.
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6899998 9999999999989999 89999999887766543 34321 222111011233333333322 37999998
Q ss_pred CCCC
Q 017335 280 CIGL 283 (373)
Q Consensus 280 ~~g~ 283 (373)
+.|.
T Consensus 81 ~ag~ 84 (248)
T PRK10538 81 NAGL 84 (248)
T ss_pred CCCc
Confidence 8763
No 404
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.78 E-value=0.15 Score=53.65 Aligned_cols=76 Identities=29% Similarity=0.321 Sum_probs=52.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh---------------------HHHHHHHcCCceEEcCCCCCCc
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK 260 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~---------------------~~~~~~~lga~~vi~~~~~~~~ 260 (373)
.+++|+|+|+|+.|+.++..++..|+ +|+++++.+. ..+.++++|.+...+..-..+.
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 57899999999999999999999999 8999987543 3455667786544433210001
Q ss_pred cHHHHHHHhcCCCccEEEECCCC
Q 017335 261 TVSQVIKEMTDGGADYCFECIGL 283 (373)
Q Consensus 261 ~~~~~i~~~~~~~~d~vid~~g~ 283 (373)
.+. .+. ..+|.||.++|.
T Consensus 405 ~~~----~~~-~~~DavilAtGa 422 (654)
T PRK12769 405 SLE----SLL-EDYDAVFVGVGT 422 (654)
T ss_pred CHH----HHH-hcCCEEEEeCCC
Confidence 121 111 269999998885
No 405
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.78 E-value=0.12 Score=42.26 Aligned_cols=79 Identities=19% Similarity=0.293 Sum_probs=50.3
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEc-CChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
.-+|-|+|+|.+|......++..|. .|..+. ++.+..+.+.. ++...+.+..+ .. ..+|++|-+
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------------~~-~~aDlv~ia 75 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE------------IL-RDADLVFIA 75 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG------------GG-CC-SEEEE-
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc------------cc-ccCCEEEEE
Confidence 4589999999999999999999999 888875 44555555543 44433333221 11 278999999
Q ss_pred CCCHHHHHHHHHHhcc
Q 017335 281 IGLTSVMNDAFNSSRE 296 (373)
Q Consensus 281 ~g~~~~~~~~~~~l~~ 296 (373)
+.... +..+++.|..
T Consensus 76 vpDda-I~~va~~La~ 90 (127)
T PF10727_consen 76 VPDDA-IAEVAEQLAQ 90 (127)
T ss_dssp S-CCH-HHHHHHHHHC
T ss_pred echHH-HHHHHHHHHH
Confidence 99887 7777777764
No 406
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.77 E-value=0.32 Score=44.06 Aligned_cols=76 Identities=25% Similarity=0.240 Sum_probs=47.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~v 277 (373)
.++++||+|+ |.+|...+..+...|+ +|++++++. ....+.. +.+..+-....++.+.+.+... +.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 8999999998888999 999998875 2222211 2222121111233333333221 368999
Q ss_pred EECCCC
Q 017335 278 FECIGL 283 (373)
Q Consensus 278 id~~g~ 283 (373)
|.+.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998774
No 407
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.67 E-value=0.21 Score=43.23 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=29.7
Q ss_pred EEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
+|+|+|+|++|...++.+...|..++..+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899998765
No 408
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.67 E-value=0.23 Score=44.79 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=51.5
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCc-eEEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
++.++||+|+ |.+|...+..+...|+ .|+...++.++.+.+. .++.. +++..+-...+++.+.+.+... +++|+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4679999998 9999999998888998 8888888877665543 34421 2222221011223222222221 37999
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9998874
No 409
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.67 E-value=0.2 Score=45.50 Aligned_cols=80 Identities=21% Similarity=0.322 Sum_probs=50.2
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhc--CCCc
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT--DGGA 274 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~--~~~~ 274 (373)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+.. +.+..+-....++...+.+.. .++.
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 357999998 9999999988888999 99999998877655533 2221 122122111123333333322 1368
Q ss_pred cEEEECCCC
Q 017335 275 DYCFECIGL 283 (373)
Q Consensus 275 d~vid~~g~ 283 (373)
|+||.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999977753
No 410
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=94.63 E-value=0.22 Score=44.18 Aligned_cols=96 Identities=19% Similarity=0.245 Sum_probs=64.6
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc--eEEcCCCCCCccHHHHHHHhc-CCCc
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEMT-DGGA 274 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~--~vi~~~~~~~~~~~~~i~~~~-~~~~ 274 (373)
++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+.. .++. .++.+.+.... ++.+
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~------~d~~~~l~~~~~~~~~ 112 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC------GDAVEVLLDMFPDGSL 112 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe------cCHHHHHHHHcCcccc
Confidence 678999999987 7777788877643489999999998887754 2322 2232 22322333222 3378
Q ss_pred cEEEECCC--------------CHHHHHHHHHHhccCCceEEEEc
Q 017335 275 DYCFECIG--------------LTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 275 d~vid~~g--------------~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
|.|+-... ....+..+.+.|+++ |.++..-
T Consensus 113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 99885322 244688999999997 9988763
No 411
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.63 E-value=0.31 Score=45.93 Aligned_cols=94 Identities=15% Similarity=0.216 Sum_probs=67.5
Q ss_pred ccchhhhhHHHHHHHHhCC-CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335 182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (373)
Q Consensus 182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~ 259 (373)
.+||+...... +++..++ -.|++|.|+|. +.+|.-.+.++...|+ +|.+..+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 45555444444 4455554 46999999999 5999999999999999 8888864422
Q ss_pred ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
+..+.+ ..+|+|+-++|.+..+...+ +++| ..++++|..
T Consensus 195 -~l~e~~-----~~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 -DAKALC-----RQADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred -CHHHHH-----hcCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 111111 15899999999888666655 8997 999999964
No 412
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=94.62 E-value=0.91 Score=42.08 Aligned_cols=99 Identities=14% Similarity=0.213 Sum_probs=63.7
Q ss_pred HhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHHh
Q 017335 197 VAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 197 ~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~~ 269 (373)
...+++|++||=+|+|+ |-.++.++..++ ...|++++.++++.+.++ +.|... ++..+. ..+ ..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~---~~~----~~- 136 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDG---RVF----GA- 136 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCH---HHh----hh-
Confidence 34678999999998876 555566666653 238999999999887764 456543 222221 111 11
Q ss_pred cCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEEc
Q 017335 270 TDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 270 ~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~G 305 (373)
..+.||.|+ | |+|. ...+..+++.+++| |+++...
T Consensus 137 ~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYst 199 (264)
T TIGR00446 137 AVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYST 199 (264)
T ss_pred hccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 123699998 4 4443 12577888999997 9887543
No 413
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.61 E-value=0.078 Score=44.41 Aligned_cols=95 Identities=18% Similarity=0.126 Sum_probs=56.7
Q ss_pred EEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCC--CC-ccHHHHHHHhcCCCccEEEECCC
Q 017335 206 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC--GD-KTVSQVIKEMTDGGADYCFECIG 282 (373)
Q Consensus 206 VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~--~~-~~~~~~i~~~~~~~~d~vid~~g 282 (373)
|+|+|+|++|.+.+..++..|. +|..+.+.+ +.+.+++-|..-.....+. .. ...... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888888999 999999888 7777776553211111000 00 000000 111237999999987
Q ss_pred CHH---HHHHHHHHhccCCceEEEEc
Q 017335 283 LTS---VMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 283 ~~~---~~~~~~~~l~~~~G~~v~~G 305 (373)
... .++.+...+.++ ..++.+-
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~q 101 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQ 101 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEES
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEe
Confidence 655 233344444554 5677664
No 414
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.61 E-value=0.21 Score=45.64 Aligned_cols=80 Identities=20% Similarity=0.231 Sum_probs=49.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.+|||+|+ |++|...++.+...|+ +|+++.+++ +.+.+ .+.+.. .++..+-....++...+.+... +.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 8999999999989999 888888773 32222 233422 2222222111222223332221 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998773
No 415
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.59 E-value=0.28 Score=46.70 Aligned_cols=106 Identities=12% Similarity=0.020 Sum_probs=66.2
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHHH-c---CCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335 199 GVEVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDKTVSQVIKEMTDGG 273 (373)
Q Consensus 199 ~~~~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~~-l---ga~~vi~~~~~~~~~~~~~i~~~~~~~ 273 (373)
.-....+|+|+|+|..|...+..+. ..+..+|.+..+++++.+.+.+ + |.. +... .+..+.+ .+
T Consensus 121 a~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av-----~~ 189 (314)
T PRK06141 121 ARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAV-----RQ 189 (314)
T ss_pred CCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHH-----hc
Confidence 3356789999999999999876544 4676699999999888666543 3 321 1111 1222222 26
Q ss_pred ccEEEECCCCHHHHHHHHHHhccCCceEEEEcccCCCCccccCHH
Q 017335 274 ADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 318 (373)
Q Consensus 274 ~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~~~~~~~~~~~ 318 (373)
+|+|+.++++...+ .-.+.++++ -.+..+|.... ..-+++..
T Consensus 190 aDIVi~aT~s~~pv-l~~~~l~~g-~~i~~ig~~~~-~~~El~~~ 231 (314)
T PRK06141 190 ADIISCATLSTEPL-VRGEWLKPG-THLDLVGNFTP-DMRECDDE 231 (314)
T ss_pred CCEEEEeeCCCCCE-ecHHHcCCC-CEEEeeCCCCc-ccccCCHH
Confidence 99999988865311 112568886 77777775433 22355543
No 416
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.59 E-value=0.15 Score=45.67 Aligned_cols=75 Identities=15% Similarity=0.192 Sum_probs=49.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-CccEEEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFE 279 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vid 279 (373)
.++++||+|+ |.+|...++.+...|+ +|+++.++.++. ... .++..+-....++.+.+.+.... ++|++|.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPG-ELFACDLADIEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCc-eEEEeeCCCHHHHHHHHHHHHHhCCCcEEEE
Confidence 3578999998 9999999999989998 999999876541 111 22222211123333444444333 6899999
Q ss_pred CCCC
Q 017335 280 CIGL 283 (373)
Q Consensus 280 ~~g~ 283 (373)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8774
No 417
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=94.57 E-value=0.2 Score=47.00 Aligned_cols=78 Identities=21% Similarity=0.271 Sum_probs=56.9
Q ss_pred CCCCEEEEECC-ChHHHH-HHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCC---ceEEcCCCCCCcc-HHHHHHHh
Q 017335 201 EVGSTVAIFGL-GAVGLA-VAEGARLNRASKIIGVDINPEKFEIGKK-----FGI---TDFINPATCGDKT-VSQVIKEM 269 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~-a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga---~~vi~~~~~~~~~-~~~~i~~~ 269 (373)
+.|++.+|.|+ .++|.+ +-++|+ .|. +|+.+.|+++|++.+++ .++ ..++|... .+ .-+.+++.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~ 121 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEK 121 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHH
Confidence 34789999999 789987 556666 999 89999999999888753 342 23455544 33 35666666
Q ss_pred cCC-CccEEEECCCC
Q 017335 270 TDG-GADYCFECIGL 283 (373)
Q Consensus 270 ~~~-~~d~vid~~g~ 283 (373)
..+ .+-+.+|++|-
T Consensus 122 l~~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 122 LAGLDVGILVNNVGM 136 (312)
T ss_pred hcCCceEEEEecccc
Confidence 666 88899999884
No 418
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=94.57 E-value=0.033 Score=31.04 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=15.9
Q ss_pred eeeEEeecCCCCeEEEEEecCCC
Q 017335 16 CKAAICRIPGKPLVIEEIEVEPP 38 (373)
Q Consensus 16 ~ka~~~~~~~~~l~~~~~~~p~~ 38 (373)
|||+++.++++ ++++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999988 99999998875
No 419
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.57 E-value=0.22 Score=48.29 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=32.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
.+.+|+|+|+|++|..++..+...|++++..+|.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 357999999999999999999999999999998754
No 420
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.54 E-value=0.23 Score=45.28 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=49.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhHHHHHHHcCCceE-EcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~-~~~~~~~~~lga~~v-i~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
.+.+++|+|+ |++|...++.+...|+ +|+.+.+. ++..+.++..+...+ .|-.+ .+++.+.+.+... +++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4689999998 9999999998888999 78776544 344444444343221 22222 1333333333322 37899
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998864
No 421
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.54 E-value=0.21 Score=40.95 Aligned_cols=95 Identities=13% Similarity=0.216 Sum_probs=58.1
Q ss_pred EEEECC-ChHHHHHHHHHHHCC--CCeEEEEcCChhH---HHHHHHcCCceEEcCCCCCCccHHH---------------
Q 017335 206 VAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPEK---FEIGKKFGITDFINPATCGDKTVSQ--------------- 264 (373)
Q Consensus 206 VlI~G~-G~vG~~a~~la~~~G--~~~Vi~~~~~~~~---~~~~~~lga~~vi~~~~~~~~~~~~--------------- 264 (373)
|.|+|+ |++|..++...+... + +|+++.....- .+.++++.+..+.-.++.....+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578999 999999999999987 6 78776654432 2334667877766555300011111
Q ss_pred -HHHHhcC-CCccEEEECCCCHHHHHHHHHHhccCCceEE
Q 017335 265 -VIKEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTV 302 (373)
Q Consensus 265 -~i~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v 302 (373)
.+.++.. ..+|+|+..+-+...+.-.+.+++.+ -++.
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~ia 118 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIA 118 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEE
Confidence 1223333 37889998877777688888888874 4443
No 422
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.29 Score=44.27 Aligned_cols=78 Identities=12% Similarity=0.137 Sum_probs=48.6
Q ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-c----CCc-eEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335 204 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTDGGADY 276 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-l----ga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~ 276 (373)
.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ + +.. +++..+-....++.+.+.+. ...+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSL-PALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHH-hhcCCE
Confidence 57999998 9999999998888999 89999998876654322 1 111 22222221112233333322 225799
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
++.+.|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9987663
No 423
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=94.51 E-value=0.19 Score=47.83 Aligned_cols=101 Identities=14% Similarity=0.047 Sum_probs=63.5
Q ss_pred HHHHHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH---HHHc-CC---ceEEcCCCCCCccHH
Q 017335 191 VGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI---GKKF-GI---TDFINPATCGDKTVS 263 (373)
Q Consensus 191 ~~~~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~---~~~l-ga---~~vi~~~~~~~~~~~ 263 (373)
|..+.......++++||-+|+|. |..+..+++. |+..|++++.++.-... +++. +. .+++.. +
T Consensus 110 ~~~~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~------~-- 179 (314)
T TIGR00452 110 WDRVLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL------G-- 179 (314)
T ss_pred HHHHHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC------C--
Confidence 33344555677899999999987 7776666654 66589999988864432 2222 21 122211 1
Q ss_pred HHHHHhcCC-CccEEEECC-----CC-HHHHHHHHHHhccCCceEEEE
Q 017335 264 QVIKEMTDG-GADYCFECI-----GL-TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 264 ~~i~~~~~~-~~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+.++... .||+|+... .. ...+..+.+.|++| |++++-
T Consensus 180 --ie~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 180 --IEQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred --HHHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 2233322 799998542 12 23688899999997 998864
No 424
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.47 E-value=0.25 Score=47.49 Aligned_cols=37 Identities=30% Similarity=0.412 Sum_probs=33.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~ 239 (373)
.|++|.|+|.|.+|...++.++..|. +|++.+++...
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~ 185 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP 185 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence 57899999999999999999999999 99999987543
No 425
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals. The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....
Probab=94.40 E-value=0.12 Score=38.83 Aligned_cols=85 Identities=24% Similarity=0.343 Sum_probs=54.6
Q ss_pred EECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce---EEcCCCCCCccHHHHHHHhcCCCccEEEECCC--
Q 017335 208 IFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD---FINPATCGDKTVSQVIKEMTDGGADYCFECIG-- 282 (373)
Q Consensus 208 I~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~---vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g-- 282 (373)
-+|+|. |..+..+++.-+. +|++++.+++..+.+++..... +...+. .++ ...++.||+|+....
T Consensus 2 diG~G~-G~~~~~l~~~~~~-~v~~~D~~~~~~~~~~~~~~~~~~~~~~~d~---~~l-----~~~~~sfD~v~~~~~~~ 71 (95)
T PF08241_consen 2 DIGCGT-GRFAAALAKRGGA-SVTGIDISEEMLEQARKRLKNEGVSFRQGDA---EDL-----PFPDNSFDVVFSNSVLH 71 (95)
T ss_dssp EET-TT-SHHHHHHHHTTTC-EEEEEES-HHHHHHHHHHTTTSTEEEEESBT---TSS-----SS-TT-EEEEEEESHGG
T ss_pred EecCcC-CHHHHHHHhccCC-EEEEEeCCHHHHHHHHhcccccCchheeehH---HhC-----cccccccccccccccee
Confidence 456664 8888888888445 9999999999888887744322 332222 111 222347999996433
Q ss_pred ----CHHHHHHHHHHhccCCceEEE
Q 017335 283 ----LTSVMNDAFNSSREGWGKTVI 303 (373)
Q Consensus 283 ----~~~~~~~~~~~l~~~~G~~v~ 303 (373)
....+.++.+.|+++ |++++
T Consensus 72 ~~~~~~~~l~e~~rvLk~g-G~l~~ 95 (95)
T PF08241_consen 72 HLEDPEAALREIYRVLKPG-GRLVI 95 (95)
T ss_dssp GSSHHHHHHHHHHHHEEEE-EEEEE
T ss_pred eccCHHHHHHHHHHHcCcC-eEEeC
Confidence 233678999999997 99874
No 426
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.40 E-value=0.26 Score=45.63 Aligned_cols=81 Identities=14% Similarity=-0.019 Sum_probs=50.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc--CCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DGG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~--~~~ 273 (373)
...+++|+|+ |.+|...++.+...|+ +|+++.++.++.+.+. ..+.. +++..+-....++.+.+.+.. -++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3468999998 9999999998888999 8999888776544332 23432 222222211122333333221 136
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999988874
No 427
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.36 E-value=0.37 Score=45.21 Aligned_cols=43 Identities=21% Similarity=0.225 Sum_probs=37.2
Q ss_pred EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (373)
Q Consensus 205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 248 (373)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 37789999999988888888898 99999999999888877765
No 428
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.34 E-value=0.26 Score=46.00 Aligned_cols=79 Identities=20% Similarity=0.227 Sum_probs=50.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhH----HHHHHHcC-C-ceEEcCCCCCCccHHHHHHHhcCC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK----FEIGKKFG-I-TDFINPATCGDKTVSQVIKEMTDG-- 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~----~~~~~~lg-a-~~vi~~~~~~~~~~~~~i~~~~~~-- 272 (373)
.|+.|||+|+ +++|.+.++=...+|+ +++..|.+++. .+..++.| + ..+.|-.+ .+++.+...+..+.
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEVG 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhcC
Confidence 6899999998 7999886666666677 88888877653 33344445 2 12334333 24444433333333
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
.+|+++|..|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999998884
No 429
>PRK12335 tellurite resistance protein TehB; Provisional
Probab=94.33 E-value=0.12 Score=48.65 Aligned_cols=90 Identities=14% Similarity=0.162 Sum_probs=57.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcCCCccE
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTDGGADY 276 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~~~~d~ 276 (373)
++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+.+++ .+.. .+... ++.. ...++.+|+
T Consensus 120 ~~~~vLDlGcG~-G~~~~~la~-~g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~~~------D~~~---~~~~~~fD~ 187 (287)
T PRK12335 120 KPGKALDLGCGQ-GRNSLYLAL-LGF-DVTAVDINQQSLENLQEIAEKENLNIRTGLY------DINS---ASIQEEYDF 187 (287)
T ss_pred CCCCEEEeCCCC-CHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHcCCceEEEEe------chhc---ccccCCccE
Confidence 445999999876 666666766 477 99999999987776653 2321 11111 1111 011347999
Q ss_pred EEECCC--------CHHHHHHHHHHhccCCceEEEE
Q 017335 277 CFECIG--------LTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 277 vid~~g--------~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
|+.+.- ....+..+.+.|+++ |.++.+
T Consensus 188 I~~~~vl~~l~~~~~~~~l~~~~~~Lkpg-G~~l~v 222 (287)
T PRK12335 188 ILSTVVLMFLNRERIPAIIKNMQEHTNPG-GYNLIV 222 (287)
T ss_pred EEEcchhhhCCHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 996532 123577788899997 986554
No 430
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.32 E-value=0.27 Score=46.59 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=30.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN 236 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~ 236 (373)
.++++||+|+ +++|++.++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4789999998 8999999999999999 89998876
No 431
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.32 E-value=0.32 Score=44.06 Aligned_cols=83 Identities=19% Similarity=0.206 Sum_probs=51.9
Q ss_pred CCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH----HHcCCc--eEE--cCCCCCCccHHHHHHHhc
Q 017335 200 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT--DFI--NPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 200 ~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~----~~lga~--~vi--~~~~~~~~~~~~~i~~~~ 270 (373)
..++.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ++.+.. +++ +.......++.+.+....
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457889999998 9999998888888899 999999987665443 233322 122 221101123333333222
Q ss_pred C--CCccEEEECCCC
Q 017335 271 D--GGADYCFECIGL 283 (373)
Q Consensus 271 ~--~~~d~vid~~g~ 283 (373)
. +.+|++|.+.+.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 2 368999987763
No 432
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.30 E-value=0.3 Score=44.83 Aligned_cols=81 Identities=23% Similarity=0.300 Sum_probs=51.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.++||+|+ +++|...+..+...|+ +|+.+++++++.+.+. +.|... .+..+-....++.+.+.+... +.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5679999998 8999998888888999 8999998887654432 334321 222222111223333333222 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++.+.|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 433
>PLN02928 oxidoreductase family protein
Probab=94.29 E-value=0.25 Score=47.73 Aligned_cols=35 Identities=31% Similarity=0.464 Sum_probs=32.4
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
.|++|.|+|.|.+|..+++.++.+|. +|++.+++.
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~ 192 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW 192 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence 47899999999999999999999999 999999863
No 434
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.27 E-value=0.27 Score=45.30 Aligned_cols=81 Identities=16% Similarity=0.293 Sum_probs=48.8
Q ss_pred CCCEEEEECC---ChHHHHHHHHHHHCCCCeEEEEcCC---hhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDIN---PEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~---G~vG~~a~~la~~~G~~~Vi~~~~~---~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
.++++||+|+ +++|++.++.+...|+ +|+.+.+. +++.+.+ ++++....+..+-..++++.+.+..... +
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 4789999994 5899998888888999 88887543 3333333 3345322222222112334444443322 4
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
.+|+++++.|.
T Consensus 84 ~iD~lvnnAG~ 94 (260)
T PRK06997 84 GLDGLVHSIGF 94 (260)
T ss_pred CCcEEEEcccc
Confidence 79999998763
No 435
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=94.27 E-value=0.28 Score=47.23 Aligned_cols=94 Identities=17% Similarity=0.234 Sum_probs=63.8
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-c--eEEcCCCCCCccHHHHHHHh--cCCCcc
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-T--DFINPATCGDKTVSQVIKEM--TDGGAD 275 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~--~vi~~~~~~~~~~~~~i~~~--~~~~~d 275 (373)
.++.+||-+|+|. |..+..+++..+..+|+++|.+++..+.+++... . .++. .+ +.++ .++.||
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~------gD----~e~lp~~~~sFD 180 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE------GD----AEDLPFPTDYAD 180 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe------cc----HHhCCCCCCcee
Confidence 5688999999876 7777778887654499999999888777765321 1 1221 11 2222 223799
Q ss_pred EEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335 276 YCFECIG------LTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 276 ~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
+|+.+.. ....+.++.+.|++| |+++..+.
T Consensus 181 vVIs~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 181 RYVSAGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred EEEEcChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 9986432 234678899999997 99988754
No 436
>PLN02256 arogenate dehydrogenase
Probab=94.27 E-value=0.41 Score=45.41 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=61.3
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCC
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGG 273 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~ 273 (373)
+.+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|+.. . .+..+.+ ...
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~-------~~~~e~~----~~~ 92 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F-------RDPDDFC----EEH 92 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e-------CCHHHHh----hCC
Confidence 3344444456789999999999999998888887 8999998864 35566677531 1 1121111 125
Q ss_pred ccEEEECCCCHHHHHHHHHH-----hccCCceEEEEcc
Q 017335 274 ADYCFECIGLTSVMNDAFNS-----SREGWGKTVILGV 306 (373)
Q Consensus 274 ~d~vid~~g~~~~~~~~~~~-----l~~~~G~~v~~G~ 306 (373)
+|+||-|+.... +...++. ++++ ..++.++.
T Consensus 93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 788888887554 3333332 3454 66666654
No 437
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.26 E-value=0.22 Score=46.35 Aligned_cols=80 Identities=19% Similarity=0.166 Sum_probs=53.9
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH----cCCc------eEEcCCCCCCcc---HHHHH
Q 017335 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT------DFINPATCGDKT---VSQVI 266 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~----lga~------~vi~~~~~~~~~---~~~~i 266 (373)
-.++++||+|+ .++|.+.+..+...|+ +|+.+.+++++.+..++ .+.. .+.|-.. +++ ..+..
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~ 82 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFA 82 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHH
Confidence 46789999998 7999999999999999 99999999988666542 2221 1222222 122 22222
Q ss_pred HHhcCCCccEEEECCCC
Q 017335 267 KEMTDGGADYCFECIGL 283 (373)
Q Consensus 267 ~~~~~~~~d~vid~~g~ 283 (373)
.+...|+.|+.++..|.
T Consensus 83 ~~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGA 99 (270)
T ss_pred HHHhCCCCCEEEEcCCc
Confidence 23334579999998774
No 438
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=94.24 E-value=0.61 Score=46.54 Aligned_cols=102 Identities=20% Similarity=0.283 Sum_probs=66.4
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE 268 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~ 268 (373)
...++++|++||=+|+|+ |--+.+++..++ ..+|+++|.++++.+.++ ++|.+. ++..+. .++ ..
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da---~~l----~~ 302 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADA---ERL----TE 302 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECch---hhh----hh
Confidence 345788999999998866 555666677663 238999999999988875 466543 333222 111 11
Q ss_pred hcCCCccEEE-E--CCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 017335 269 MTDGGADYCF-E--CIGLT-------------------------SVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 269 ~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
...+.||.|+ | |+|.. ..+..+++.+++| |+++..-.
T Consensus 303 ~~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC 367 (431)
T PRK14903 303 YVQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTC 367 (431)
T ss_pred hhhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence 2234799998 3 44431 1366888999997 98765543
No 439
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.24 E-value=0.53 Score=44.44 Aligned_cols=92 Identities=18% Similarity=0.268 Sum_probs=56.1
Q ss_pred CEEEEECCChHHHH-HHHHHHHCCCCeEEE-EcCChh--HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 204 STVAIFGLGAVGLA-VAEGARLNRASKIIG-VDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 204 ~~VlI~G~G~vG~~-a~~la~~~G~~~Vi~-~~~~~~--~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
-+|.|+|.|.+|.. +..+.+.-+. ++.+ ++.+++ .+..++++|..... .++...+....-..+|+||+
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~~~~~dIDiVf~ 76 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAMPEFDDIDIVFD 76 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhCcCCCCCCEEEE
Confidence 47899999999987 4444444456 5554 445544 34567778854322 12322232111137999999
Q ss_pred CCCCHHHHHHHHHHhccCCceEEEE
Q 017335 280 CIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 280 ~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+++.....+.+..++..| -.+++.
T Consensus 77 AT~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 77 ATSAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred CCCHHHHHHHHHHHHHcC-CeEEEC
Confidence 999887666777766664 555444
No 440
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.24 E-value=0.56 Score=43.04 Aligned_cols=109 Identities=19% Similarity=0.232 Sum_probs=69.3
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHHH----HcCCceEEcCCCCCCccHHHHHHHhc
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~~----~lga~~vi~~~~~~~~~~~~~i~~~~ 270 (373)
...+....++||-+|.+. |..++.+|+.++. .+|+.++.+++..+.++ +.|..+-+.... .+..+.+.++.
T Consensus 73 ~l~~~~~ak~iLEiGT~~-GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~l~ 148 (247)
T PLN02589 73 MLLKLINAKNTMEIGVYT-GYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQMI 148 (247)
T ss_pred HHHHHhCCCEEEEEeChh-hHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHHHH
Confidence 334455667899998844 7788888887642 28999999998877764 456322222222 34444444442
Q ss_pred -----CCCccEEEECCCCH---HHHHHHHHHhccCCceEEEEcccCC
Q 017335 271 -----DGGADYCFECIGLT---SVMNDAFNSSREGWGKTVILGVEMH 309 (373)
Q Consensus 271 -----~~~~d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~G~~~~ 309 (373)
.+.||+||--.... ..++.+++.|++| |.++.=.....
T Consensus 149 ~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~DNvl~~ 194 (247)
T PLN02589 149 EDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYDNTLWN 194 (247)
T ss_pred hccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEcCCCCC
Confidence 24799999433332 2477888999997 88775444333
No 441
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.23 E-value=0.34 Score=47.31 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=31.8
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~ 236 (373)
.+.+|+|+|+|++|..++..+...|+.++..+|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45789999999999999999999999899999876
No 442
>PRK14968 putative methyltransferase; Provisional
Probab=94.22 E-value=0.53 Score=40.65 Aligned_cols=43 Identities=35% Similarity=0.494 Sum_probs=33.5
Q ss_pred CCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH
Q 017335 199 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 244 (373)
Q Consensus 199 ~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~ 244 (373)
...++++||.+|+|. |..+..+++. +. +|++++.+++..+.++
T Consensus 20 ~~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~ 62 (188)
T PRK14968 20 VDKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAK 62 (188)
T ss_pred hccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHH
Confidence 347888999998865 6677777776 66 9999999988777664
No 443
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.20 E-value=0.3 Score=44.26 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=48.9
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEE-EcCChhHHHHH----HHcCCc-eEEcCCCCCCccHHHHHHHhcC--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G 272 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~-~~~~~~~~~~~----~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~ 272 (373)
++.++||+|+ |.+|+..+..+...|+ +|+. ..++.++.+.+ +..+.. .++..+-....++...+.+... +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4679999998 9999999999999999 7665 46666554332 233432 2222222112333333333322 3
Q ss_pred CccEEEECCCC
Q 017335 273 GADYCFECIGL 283 (373)
Q Consensus 273 ~~d~vid~~g~ 283 (373)
++|++|.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998773
No 444
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.19 E-value=0.21 Score=45.69 Aligned_cols=75 Identities=15% Similarity=0.219 Sum_probs=47.0
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhc--CCCccEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMT--DGGADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~--~~~~d~v 277 (373)
+++++||+|+ |++|...++.+...|+ +|+++++++++. .+. -..+..+-....++.+.+.+.. .+.+|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4789999998 8999999998888999 899999876532 111 1122111101122222222221 1378999
Q ss_pred EECCC
Q 017335 278 FECIG 282 (373)
Q Consensus 278 id~~g 282 (373)
+++.|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99887
No 445
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.19 E-value=0.34 Score=47.16 Aligned_cols=99 Identities=17% Similarity=0.249 Sum_probs=64.1
Q ss_pred CEEEEECC-ChHHHHHHHHHHHC--CCCeEEEEc--CChhHHH-HHHHcCCceEEcCCCCCCccH--------------H
Q 017335 204 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVD--INPEKFE-IGKKFGITDFINPATCGDKTV--------------S 263 (373)
Q Consensus 204 ~~VlI~G~-G~vG~~a~~la~~~--G~~~Vi~~~--~~~~~~~-~~~~lga~~vi~~~~~~~~~~--------------~ 263 (373)
++|.|+|+ |++|..++...+.. .+ +|+++. ++.+++. .+++++...+.-.++.....+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57999997 99999999988765 56 777775 4444433 346688776654443000011 1
Q ss_pred HHHHHhcCC-CccEEEECCCCHHHHHHHHHHhccCCceEEEE
Q 017335 264 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 264 ~~i~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+.+.++... .+|+|++++++...+.-.+.+++.| -++.+.
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaLA 121 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIALA 121 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEEe
Confidence 122233333 6999999998876688889999885 665543
No 446
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.16 E-value=0.42 Score=43.75 Aligned_cols=99 Identities=11% Similarity=0.237 Sum_probs=65.3
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC-ceEEcCCCCCCccHHHHHHHhcCCCc
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGA 274 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga-~~vi~~~~~~~~~~~~~i~~~~~~~~ 274 (373)
+.....++.+||-+|+|. |..+..+++ .|. +|+++|.+++..+.+++... ..++..+. .++ ...++.|
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~~-----~~~~~~f 104 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ESL-----PLATATF 104 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---ccC-----cCCCCcE
Confidence 444445678999999976 666655554 576 99999999999888876432 22332221 111 1222379
Q ss_pred cEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335 275 DYCFECIG------LTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 275 d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
|+|+.... ....+..+.+.|+++ |.++....
T Consensus 105 D~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 105 DLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 99996533 233578889999997 99887643
No 447
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.15 E-value=0.29 Score=44.74 Aligned_cols=100 Identities=12% Similarity=0.120 Sum_probs=59.6
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc--CCceEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF--GITDFINPATCGDKTVSQVIKEMTDGGADYCF 278 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l--ga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vi 278 (373)
.+.+|||+|+ |.+|..+++.+...|. +|+++.+++++....... ++ .++..+- .+-.+.+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~~~~Dl---~d~~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSL-QIVRADV---TEGSDKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCce-EEEEeeC---CCCHHHHHHHhhcCCCEEE
Confidence 3679999998 9999999988888898 899998887765433221 22 2222121 1101222222212799999
Q ss_pred ECCCCHH-------------HHHHHHHHhccC-CceEEEEcc
Q 017335 279 ECIGLTS-------------VMNDAFNSSREG-WGKTVILGV 306 (373)
Q Consensus 279 d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~G~ 306 (373)
.+.|... ....+++.+... .++++.++.
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS 132 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSS 132 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8876421 123445555442 157887764
No 448
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=94.14 E-value=0.3 Score=43.90 Aligned_cols=102 Identities=20% Similarity=0.351 Sum_probs=66.8
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHHHcCC-------ceEEcCCCCCCccHHHHH
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGI-------TDFINPATCGDKTVSQVI 266 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~~lga-------~~vi~~~~~~~~~~~~~i 266 (373)
.+.....++.+||-+|+|. |..+..+++..+ ..++++++.+++..+.+++.-. ..++..+. .+.
T Consensus 44 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~---~~~---- 115 (239)
T PRK00216 44 IKWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDA---EAL---- 115 (239)
T ss_pred HHHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEeccc---ccC----
Confidence 3444566788999999987 778888888775 2399999999888777765321 11221111 111
Q ss_pred HHhcCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEcc
Q 017335 267 KEMTDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 267 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
....+.+|+|+.... ....+..+.+.|+++ |+++.+..
T Consensus 116 -~~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~ 159 (239)
T PRK00216 116 -PFPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEF 159 (239)
T ss_pred -CCCCCCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEe
Confidence 012237899874322 234577889999997 99988765
No 449
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.12 E-value=0.5 Score=45.24 Aligned_cols=95 Identities=16% Similarity=0.067 Sum_probs=64.3
Q ss_pred CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEE-cC-----CCCCCccHHHHHHHhcCCCccEE
Q 017335 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NP-----ATCGDKTVSQVIKEMTDGGADYC 277 (373)
Q Consensus 204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi-~~-----~~~~~~~~~~~i~~~~~~~~d~v 277 (373)
-+|.|+|+|.+|.+.+..+...|. +|.+.++++++.+.+.+.+..... .. +-....+..+.+ ..+|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 479999999999999998888898 899999998887777654211000 00 000001222111 268999
Q ss_pred EECCCCHHHHHHHHHHhccCCceEEEEcc
Q 017335 278 FECIGLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
|-++.... +..+++.++++ -.++.+..
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 99999887 78888888885 66666643
No 450
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.10 E-value=0.5 Score=44.52 Aligned_cols=93 Identities=14% Similarity=0.200 Sum_probs=66.3
Q ss_pred ccchhhhhHHHHHHHHhCC-CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc-CChhHHHHHHHcCCceEEcCCCCC
Q 017335 182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKKFGITDFINPATCG 258 (373)
Q Consensus 182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~~~~lga~~vi~~~~~~ 258 (373)
.+||+....+. +++...+ -.|++|+|+|- +.+|.-.+.++...|+ +|.+.. ++.
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 45555444444 4444444 57999999995 8999999999999999 888874 332
Q ss_pred CccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335 259 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 259 ~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
++. +.+ ..+|+|+-++|.+..+...+ +++| ..++++|..
T Consensus 194 --~l~----e~~-~~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 194 --DLP----AVC-RRADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred --CHH----HHH-hcCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 111 111 15899999999988666654 8997 999999974
No 451
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.10 E-value=0.41 Score=43.31 Aligned_cols=75 Identities=21% Similarity=0.239 Sum_probs=55.9
Q ss_pred EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH--cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK--FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (373)
Q Consensus 205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~--lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 282 (373)
+++|+|+|.+|...++.+...|. .|++++.++++.+...+ .+. +++..+. .-.+.+++.--..+|+++-++|
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~----t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA----TDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence 68899999999999999999999 99999999999777433 554 4444443 2233444442238999999999
Q ss_pred CHH
Q 017335 283 LTS 285 (373)
Q Consensus 283 ~~~ 285 (373)
...
T Consensus 76 ~d~ 78 (225)
T COG0569 76 NDE 78 (225)
T ss_pred CCH
Confidence 755
No 452
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.08 E-value=2.2 Score=38.44 Aligned_cols=93 Identities=13% Similarity=0.004 Sum_probs=57.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
.+.+|||+|+|.++.-=+..+...|+ +|.++...- +....+.+.|.-..+ .+.+.+.+ + .++++||-+
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~-~r~~~~~d-------l--~g~~LViaA 92 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLI-KGNYDKEF-------I--KDKHLIVIA 92 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEE-eCCCChHH-------h--CCCcEEEEC
Confidence 47799999999999888888888998 777776432 122222233332232 22211111 1 379999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 017335 281 IGLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
++....=..+....+.. +.++....
T Consensus 93 TdD~~vN~~I~~~a~~~-~~lvn~vd 117 (223)
T PRK05562 93 TDDEKLNNKIRKHCDRL-YKLYIDCS 117 (223)
T ss_pred CCCHHHHHHHHHHHHHc-CCeEEEcC
Confidence 99988344455555554 66666543
No 453
>PRK14904 16S rRNA methyltransferase B; Provisional
Probab=94.07 E-value=0.53 Score=47.15 Aligned_cols=100 Identities=24% Similarity=0.284 Sum_probs=63.7
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE 268 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~ 268 (373)
......+|++||=+|+|+ |..+..+++.++ ..+|++++.++++.+.++ ++|.+. ++..+. .++
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da---~~~------ 313 (445)
T PRK14904 244 LLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDA---RSF------ 313 (445)
T ss_pred HhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCcc---ccc------
Confidence 345678999999998865 444445555442 238999999999877664 466543 232222 111
Q ss_pred hcCCCccEEE-E--CCCCH-------------------------HHHHHHHHHhccCCceEEEEcc
Q 017335 269 MTDGGADYCF-E--CIGLT-------------------------SVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 269 ~~~~~~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
..++.||.|+ | |+|.. ..+..+++.+++| |+++..-.
T Consensus 314 ~~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvystc 378 (445)
T PRK14904 314 SPEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPG-GVLVYATC 378 (445)
T ss_pred ccCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 1123799998 4 55531 2477888899997 99886543
No 454
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.07 E-value=1.1 Score=35.55 Aligned_cols=88 Identities=20% Similarity=0.288 Sum_probs=60.7
Q ss_pred EEEEECCChHHHHHHHHHHHC--CCCeEE-EEcCChhHHHHH-HHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 205 TVAIFGLGAVGLAVAEGARLN--RASKII-GVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 205 ~VlI~G~G~vG~~a~~la~~~--G~~~Vi-~~~~~~~~~~~~-~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
+|.|+|.|..|......++.. +. +++ ++++++++.+.+ +++|.. ++ .++.+.+.+ ..+|+|+.+
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~---~~~D~V~I~ 69 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLAD---EDVDAVIIA 69 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHH---TTESEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHh---hcCCEEEEe
Confidence 588999999999887666655 45 555 467777766654 567776 44 233333332 279999999
Q ss_pred CCCHHHHHHHHHHhccCCceEEEEcc
Q 017335 281 IGLTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
+....-.+.+..++.. |+-+++.-
T Consensus 70 tp~~~h~~~~~~~l~~--g~~v~~EK 93 (120)
T PF01408_consen 70 TPPSSHAEIAKKALEA--GKHVLVEK 93 (120)
T ss_dssp SSGGGHHHHHHHHHHT--TSEEEEES
T ss_pred cCCcchHHHHHHHHHc--CCEEEEEc
Confidence 9987778888888888 45566643
No 455
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=94.07 E-value=0.099 Score=47.08 Aligned_cols=102 Identities=17% Similarity=0.248 Sum_probs=64.4
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH-HHcCCceEEcCCCCC-----------CccHH
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCG-----------DKTVS 263 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~-~~lga~~vi~~~~~~-----------~~~~~ 263 (373)
.....+++.+|||-|+|. |.-+..+|. .|. +|++++-++...+.+ ++.+...-....... ..|+-
T Consensus 31 ~~l~~~~~~rvLvPgCG~-g~D~~~La~-~G~-~VvGvDls~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gDfF 107 (218)
T PF05724_consen 31 DSLALKPGGRVLVPGCGK-GYDMLWLAE-QGH-DVVGVDLSPTAIEQAFEENNLEPTVTSVGGFKRYQAGRITIYCGDFF 107 (218)
T ss_dssp HHHTTSTSEEEEETTTTT-SCHHHHHHH-TTE-EEEEEES-HHHHHHHHHHCTTEEECTTCTTEEEETTSSEEEEES-TT
T ss_pred HhcCCCCCCeEEEeCCCC-hHHHHHHHH-CCC-eEEEEecCHHHHHHHHHHhccCCCcccccceeeecCCceEEEEcccc
Confidence 446778889999999876 666667775 599 999999999888876 333321111111000 00221
Q ss_pred HHHHHhcC---CCccEEEECCCC--------HHHHHHHHHHhccCCceEEEEc
Q 017335 264 QVIKEMTD---GGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 264 ~~i~~~~~---~~~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~G 305 (373)
+++. |.||+|+|+..- ......+.+.|+++ |+++++.
T Consensus 108 ----~l~~~~~g~fD~iyDr~~l~Alpp~~R~~Ya~~l~~ll~p~-g~~lLi~ 155 (218)
T PF05724_consen 108 ----ELPPEDVGKFDLIYDRTFLCALPPEMRERYAQQLASLLKPG-GRGLLIT 155 (218)
T ss_dssp ----TGGGSCHHSEEEEEECSSTTTS-GGGHHHHHHHHHHCEEEE-EEEEEEE
T ss_pred ----cCChhhcCCceEEEEecccccCCHHHHHHHHHHHHHHhCCC-CcEEEEE
Confidence 1222 269999998653 44578888999997 9954443
No 456
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=94.06 E-value=0.49 Score=44.34 Aligned_cols=86 Identities=20% Similarity=0.337 Sum_probs=55.9
Q ss_pred EEEEECCChHHHHH-HHHHHHCCCCeEEE-EcCChhH--HHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 205 TVAIFGLGAVGLAV-AEGARLNRASKIIG-VDINPEK--FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 205 ~VlI~G~G~vG~~a-~~la~~~G~~~Vi~-~~~~~~~--~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
+|.|+|+|.+|... ..+.+..+. ++.+ ++.++++ ++.++++|...... ++...+. ...+|+|+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~---~~dIDaV~ia 71 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA---NPDIDIVFDA 71 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc---CCCCCEEEEC
Confidence 68899999999865 556555567 5555 4445543 45677788654431 2222221 1279999999
Q ss_pred CCCHHHHHHHHHHhccCCceEE
Q 017335 281 IGLTSVMNDAFNSSREGWGKTV 302 (373)
Q Consensus 281 ~g~~~~~~~~~~~l~~~~G~~v 302 (373)
++.....+.+..++..| -.++
T Consensus 72 Tp~~~H~e~a~~al~aG-k~VI 92 (285)
T TIGR03215 72 TSAKAHARHARLLAELG-KIVI 92 (285)
T ss_pred CCcHHHHHHHHHHHHcC-CEEE
Confidence 99888777777777774 4443
No 457
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.05 E-value=0.33 Score=49.00 Aligned_cols=72 Identities=25% Similarity=0.265 Sum_probs=51.2
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChh-----HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-----KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGAD 275 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~-----~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d 275 (373)
..+.+|+|+|+|.+|+.++.+++..|+ +|.+++..++ ..+.+++.|.....+... . ....+|
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~----~--------~~~~~D 80 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP----T--------LPEDTD 80 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc----c--------ccCCCC
Confidence 356799999999999999999999999 8999986542 234456678754443322 1 012689
Q ss_pred EEEECCCCHH
Q 017335 276 YCFECIGLTS 285 (373)
Q Consensus 276 ~vid~~g~~~ 285 (373)
+|+-+.|...
T Consensus 81 ~Vv~s~Gi~~ 90 (480)
T PRK01438 81 LVVTSPGWRP 90 (480)
T ss_pred EEEECCCcCC
Confidence 9998888643
No 458
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.05 E-value=0.61 Score=43.85 Aligned_cols=43 Identities=23% Similarity=0.294 Sum_probs=36.8
Q ss_pred EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCC
Q 017335 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 248 (373)
Q Consensus 205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga 248 (373)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 68999999999988887778898 89999999988887776664
No 459
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.05 E-value=0.42 Score=45.17 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=47.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hHHHH----HHHcCCceEEcCCCCCCccHHHHHHHh-c-CCC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEI----GKKFGITDFINPATCGDKTVSQVIKEM-T-DGG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~-~~~~~----~~~lga~~vi~~~~~~~~~~~~~i~~~-~-~~~ 273 (373)
.+.++||+|+ |++|...++.+...|+ +|+++++.. ++.+. ++..|....+..-+..+.+-.+.+.+. . .+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4689999998 8999999888888899 888887643 23222 233343222222121112222222111 1 247
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|++.|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 460
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional
Probab=94.04 E-value=0.19 Score=46.14 Aligned_cols=94 Identities=20% Similarity=0.326 Sum_probs=62.4
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHH---CCCCeEEEEcCChhHHHHHHH----cCCc---eEEcCCCCCCccHHHHHHHh
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGARL---NRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~~---~G~~~Vi~~~~~~~~~~~~~~----lga~---~vi~~~~~~~~~~~~~i~~~ 269 (373)
+.++.+||-+|+|. |..+..+++. -+. +|++++.+++-.+.+++ .+.. .++.. ++ .+.
T Consensus 54 ~~~~~~vLDlGcGt-G~~~~~l~~~~~~~~~-~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~~------d~----~~~ 121 (247)
T PRK15451 54 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG------DI----RDI 121 (247)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHhcCCCCC-eEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEeC------Ch----hhC
Confidence 56889999999976 6666667764 356 99999999988877754 2221 12211 11 222
Q ss_pred cCCCccEEEECCC--------CHHHHHHHHHHhccCCceEEEEcc
Q 017335 270 TDGGADYCFECIG--------LTSVMNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 270 ~~~~~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~G~ 306 (373)
..+.+|+|+.... ....+..+.+.|++| |.+++...
T Consensus 122 ~~~~~D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpG-G~l~l~e~ 165 (247)
T PRK15451 122 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK 165 (247)
T ss_pred CCCCCCEEehhhHHHhCCHHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence 2236788775322 124688999999997 99988764
No 461
>PLN02336 phosphoethanolamine N-methyltransferase
Probab=94.02 E-value=0.27 Score=49.62 Aligned_cols=100 Identities=18% Similarity=0.223 Sum_probs=66.6
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHc--CCc---eEEcCCCCCCccHHHHHHHh
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF--GIT---DFINPATCGDKTVSQVIKEM 269 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~l--ga~---~vi~~~~~~~~~~~~~i~~~ 269 (373)
.+...++++.+||-+|+|. |..+..+++..|. +|++++.+++..+.+++. +.. .++..+ +.. ...
T Consensus 259 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~~d------~~~--~~~ 328 (475)
T PLN02336 259 VDKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEVAD------CTK--KTY 328 (475)
T ss_pred HHhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEEcC------ccc--CCC
Confidence 3445567899999999876 6667778887788 999999999888777542 211 122211 110 011
Q ss_pred cCCCccEEEECCC------CHHHHHHHHHHhccCCceEEEEc
Q 017335 270 TDGGADYCFECIG------LTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 270 ~~~~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
.++.||+|+.... ....+..+.+.|++| |+++...
T Consensus 329 ~~~~fD~I~s~~~l~h~~d~~~~l~~~~r~Lkpg-G~l~i~~ 369 (475)
T PLN02336 329 PDNSFDVIYSRDTILHIQDKPALFRSFFKWLKPG-GKVLISD 369 (475)
T ss_pred CCCCEEEEEECCcccccCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 1237999996322 234688999999997 9988664
No 462
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.00 E-value=0.31 Score=44.89 Aligned_cols=78 Identities=19% Similarity=0.184 Sum_probs=48.7
Q ss_pred EEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCce-EEcCCCCCCccHHHHHHHhcC--CCccE
Q 017335 205 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FINPATCGDKTVSQVIKEMTD--GGADY 276 (373)
Q Consensus 205 ~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~ 276 (373)
+|||+|+ |++|...+..+...|+ +|+.++++.++.+.+. ..+.+. ++..+-....++.+.+..... +++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899998 9999998888888899 8999998887655432 233222 222221011222222222221 37999
Q ss_pred EEECCCC
Q 017335 277 CFECIGL 283 (373)
Q Consensus 277 vid~~g~ 283 (373)
+|.+.|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9998874
No 463
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.00 E-value=1.5 Score=41.10 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=33.8
Q ss_pred CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHH
Q 017335 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 242 (373)
Q Consensus 204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~ 242 (373)
.+|.|+|+|.+|...++.+...|. .|+..+.+++..+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 479999999999998888888899 99999999998776
No 464
>PRK07791 short chain dehydrogenase; Provisional
Probab=93.98 E-value=0.42 Score=44.67 Aligned_cols=82 Identities=18% Similarity=0.188 Sum_probs=49.5
Q ss_pred CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCCh---------hHHHHH----HHcCCce-EEcCCCCCCccHHHH
Q 017335 201 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP---------EKFEIG----KKFGITD-FINPATCGDKTVSQV 265 (373)
Q Consensus 201 ~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~---------~~~~~~----~~lga~~-vi~~~~~~~~~~~~~ 265 (373)
-.++++||+|+ +++|.+.++.+...|+ +|+.++++. ++.+.+ ++.|... .+..+-...+++.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 35789999998 8999999988888999 888887654 333222 2234322 221221111233333
Q ss_pred HHHhcC--CCccEEEECCCC
Q 017335 266 IKEMTD--GGADYCFECIGL 283 (373)
Q Consensus 266 i~~~~~--~~~d~vid~~g~ 283 (373)
+.+... +.+|+++++.|.
T Consensus 83 ~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHhcCCCCEEEECCCC
Confidence 333322 479999998874
No 465
>PRK08223 hypothetical protein; Validated
Probab=93.98 E-value=0.21 Score=46.71 Aligned_cols=36 Identities=31% Similarity=0.189 Sum_probs=32.2
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
...+|+|+|+|++|..+++.+.++|..++..+|.+.
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 457899999999999999999999999999888754
No 466
>PRK12743 oxidoreductase; Provisional
Probab=93.97 E-value=0.36 Score=44.08 Aligned_cols=80 Identities=13% Similarity=0.043 Sum_probs=47.8
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEc-CChhHHHH----HHHcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEI----GKKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~-~~~~~~~~----~~~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
+++|||+|+ |++|..+++.+...|+ +|+.+. ++.++.+. +++.|.. +++..+-....++...+.+... +.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568999998 8999999999999999 887764 34444333 2334532 2222222111223232333221 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|++|.+.|.
T Consensus 81 id~li~~ag~ 90 (256)
T PRK12743 81 IDVLVNNAGA 90 (256)
T ss_pred CCEEEECCCC
Confidence 8999988773
No 467
>PRK06849 hypothetical protein; Provisional
Probab=93.95 E-value=0.48 Score=46.45 Aligned_cols=98 Identities=12% Similarity=0.026 Sum_probs=63.8
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce--EEcCCCCCCccHHHHHHHhcCC-CccEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDG-GADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~--vi~~~~~~~~~~~~~i~~~~~~-~~d~v 277 (373)
...+|||+|+ .+.|+..+..++..|. +|+++++++.......+ .+++ .+......++.+.+.+.++... ++|+|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4579999999 5689999999999999 99999988655432222 1222 2321111235577888777666 89999
Q ss_pred EECCCCHHHHHHHHHHhccCCceEE
Q 017335 278 FECIGLTSVMNDAFNSSREGWGKTV 302 (373)
Q Consensus 278 id~~g~~~~~~~~~~~l~~~~G~~v 302 (373)
|-+......+......+..+ .++.
T Consensus 81 IP~~e~~~~~a~~~~~l~~~-~~v~ 104 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAY-CEVL 104 (389)
T ss_pred EECChHHHhHHhhhhhhcCC-cEEE
Confidence 97776433344445556664 4443
No 468
>PLN00016 RNA-binding protein; Provisional
Probab=93.94 E-value=0.5 Score=46.12 Aligned_cols=96 Identities=13% Similarity=0.095 Sum_probs=61.0
Q ss_pred CCCEEEEE----CC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHH-----------HHHcCCceEEcCCCCCCccHHHH
Q 017335 202 VGSTVAIF----GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI-----------GKKFGITDFINPATCGDKTVSQV 265 (373)
Q Consensus 202 ~~~~VlI~----G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~-----------~~~lga~~vi~~~~~~~~~~~~~ 265 (373)
...+|||+ |+ |.+|...+..+...|. +|+++++++..... +...|...+. .+..+
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d- 121 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD- 121 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-
Confidence 34689999 98 9999999999988998 99999988754321 1223443332 12222
Q ss_pred HHHhcCC-CccEEEECCCCHH-HHHHHHHHhccCC-ceEEEEcc
Q 017335 266 IKEMTDG-GADYCFECIGLTS-VMNDAFNSSREGW-GKTVILGV 306 (373)
Q Consensus 266 i~~~~~~-~~d~vid~~g~~~-~~~~~~~~l~~~~-G~~v~~G~ 306 (373)
+.+.... ++|+|+++.+... ....++++++..+ .+++.++.
T Consensus 122 ~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 122 VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 2232233 8999999877432 2455666665431 36877653
No 469
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=93.94 E-value=0.5 Score=47.30 Aligned_cols=100 Identities=20% Similarity=0.288 Sum_probs=63.8
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHC-CCCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE 268 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~-G~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~ 268 (373)
....++++++||=+|+|+ |..++.+++.+ +..+|++++.++++.+.++ +.|... ++..+. .++ ...
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~---~~~---~~~ 316 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDA---RKV---HEK 316 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCc---ccc---cch
Confidence 445678899999998865 55556666665 2339999999998877664 456543 332222 111 111
Q ss_pred hcCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEE
Q 017335 269 MTDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 269 ~~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~ 304 (373)
+ .+.||+|+ | |+|. ...+..+++.|++| |+++..
T Consensus 317 ~-~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvys 378 (444)
T PRK14902 317 F-AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYS 378 (444)
T ss_pred h-cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 1 14799998 4 4432 12477888999997 998854
No 470
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.92 E-value=0.54 Score=43.97 Aligned_cols=94 Identities=20% Similarity=0.203 Sum_probs=66.3
Q ss_pred ccchhhhhHHHHHHHHhCCC-CCCEEEEECCC-hHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335 182 LLSCGVSTGVGAAWKVAGVE-VGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (373)
Q Consensus 182 ~l~~~~~ta~~~~~~~~~~~-~~~~VlI~G~G-~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~ 259 (373)
.+||+....+. +++..++. .|++|+|+|.| .+|.-.+.++...|+ +|.++.+..
T Consensus 136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t---------------------- 191 (285)
T PRK14191 136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT---------------------- 191 (285)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc----------------------
Confidence 45555555444 45555553 69999999996 899999999999999 887764321
Q ss_pred ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
+++.+.++ .+|+|+-++|.+..+. -+.+++| ..++.+|..
T Consensus 192 ~~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 192 KDLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN 231 (285)
T ss_pred HHHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence 22221121 6899999999887433 4577997 999999974
No 471
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=93.90 E-value=0.61 Score=44.20 Aligned_cols=59 Identities=24% Similarity=0.169 Sum_probs=48.5
Q ss_pred HHHhCCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC---ChhHHHHHHHcCCceEEcC
Q 017335 195 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFINP 254 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~---~~~~~~~~~~lga~~vi~~ 254 (373)
...+.+.||.++||=.. |.+|...+-++...|+ +++++-. +.||...++.+|+.-|..+
T Consensus 95 e~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~tp 157 (362)
T KOG1252|consen 95 EKKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILTP 157 (362)
T ss_pred HHcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEecC
Confidence 45567999999999987 8999999999999999 7777765 4588888999998655543
No 472
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.89 E-value=0.37 Score=43.36 Aligned_cols=80 Identities=23% Similarity=0.321 Sum_probs=48.6
Q ss_pred CCEEEEECC-ChHHHHHHHHHHHCCCCeEEEE-cCChhHHHHHHH----cCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 203 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 203 ~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~-~~~~~~~~~~~~----lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
++++||+|+ |.+|...+..+...|+ +|+++ +++.++.+.+.. .+.. .++..+-....++.+.+..... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 568999998 9999998888878899 88888 887766544322 2221 2222222111223222322211 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+||.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999988764
No 473
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=93.87 E-value=0.38 Score=47.30 Aligned_cols=106 Identities=14% Similarity=0.192 Sum_probs=61.0
Q ss_pred CCCCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHH-------HHHHcCCceEEcCCCCCCccHHHHHHHhc
Q 017335 199 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE-------IGKKFGITDFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 199 ~~~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~-------~~~~lga~~vi~~~~~~~~~~~~~i~~~~ 270 (373)
.-..+.+|||+|+ |.+|..++..+...|. +|++++++..+.. ........+++..+-.....+.+.+...
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~- 133 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE- 133 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-
Confidence 3456779999998 9999999999988999 8999998765421 1111211223322220112232333221
Q ss_pred CCCccEEEECCCCH------------HHHHHHHHHhccC-CceEEEEcc
Q 017335 271 DGGADYCFECIGLT------------SVMNDAFNSSREG-WGKTVILGV 306 (373)
Q Consensus 271 ~~~~d~vid~~g~~------------~~~~~~~~~l~~~-~G~~v~~G~ 306 (373)
..++|+||+|.+.. .....+++.++.. -++++.++.
T Consensus 134 ~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS 182 (390)
T PLN02657 134 GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSA 182 (390)
T ss_pred CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 11699999987631 0122344544442 146887764
No 474
>PTZ00146 fibrillarin; Provisional
Probab=93.85 E-value=0.62 Score=43.74 Aligned_cols=102 Identities=20% Similarity=0.176 Sum_probs=61.9
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCC-CeEEEEcCChhHHHHH----HH-cCCceEEcCCCCCCccHHHHHHH
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIG----KK-FGITDFINPATCGDKTVSQVIKE 268 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~-~~Vi~~~~~~~~~~~~----~~-lga~~vi~~~~~~~~~~~~~i~~ 268 (373)
++...++++++||=+|+|+ |..+..+++..|. .+|++++.+++-.+.+ ++ .+...++ .+. ........
T Consensus 125 ~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~-~Da----~~p~~y~~ 198 (293)
T PTZ00146 125 VANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPII-EDA----RYPQKYRM 198 (293)
T ss_pred cceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEE-CCc----cChhhhhc
Confidence 3455789999999999977 7788888888763 3899999886533222 22 1222222 221 01111111
Q ss_pred hcCCCccEEEECCCCHH----HHHHHHHHhccCCceEEEE
Q 017335 269 MTDGGADYCFECIGLTS----VMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 269 ~~~~~~d~vid~~g~~~----~~~~~~~~l~~~~G~~v~~ 304 (373)
.. +.+|+||-.+..+. ....+.+.|+++ |++++.
T Consensus 199 ~~-~~vDvV~~Dva~pdq~~il~~na~r~LKpG-G~~vI~ 236 (293)
T PTZ00146 199 LV-PMVDVIFADVAQPDQARIVALNAQYFLKNG-GHFIIS 236 (293)
T ss_pred cc-CCCCEEEEeCCCcchHHHHHHHHHHhccCC-CEEEEE
Confidence 11 36999995443222 234677799997 998874
No 475
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=93.83 E-value=0.43 Score=49.25 Aligned_cols=94 Identities=11% Similarity=0.139 Sum_probs=64.0
Q ss_pred CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCCC
Q 017335 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 283 (373)
Q Consensus 204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 283 (373)
++++|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|...+. .+. .++ +.+++.--+.+|.++-++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~-GD~-~~~---~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVL-GNA-ANE---EIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEE-cCC-CCH---HHHHhcCccccCEEEEEcCC
Confidence 689999999999999999999999 999999999999999988865443 333 112 22333222378988877665
Q ss_pred HHH---HHHHHHHhccCCceEEEE
Q 017335 284 TSV---MNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 284 ~~~---~~~~~~~l~~~~G~~v~~ 304 (373)
... +-.+.+...+. .+++.-
T Consensus 492 ~~~~~~iv~~~~~~~~~-~~iiar 514 (558)
T PRK10669 492 GYEAGEIVASAREKRPD-IEIIAR 514 (558)
T ss_pred hHHHHHHHHHHHHHCCC-CeEEEE
Confidence 431 11233444443 555543
No 476
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.80 E-value=0.67 Score=44.50 Aligned_cols=37 Identities=38% Similarity=0.363 Sum_probs=33.3
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhH
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK 239 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~ 239 (373)
.|.+|.|+|.|.+|...++.++..|. +|++.+++++.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~ 181 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK 181 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence 56799999999999999999999999 99999987654
No 477
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=93.74 E-value=0.83 Score=45.62 Aligned_cols=103 Identities=17% Similarity=0.252 Sum_probs=64.5
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCC-CCeEEEEcCChhHHHHHH----HcCCce--EEcCCCCCCccHHHHHHH
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKE 268 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G-~~~Vi~~~~~~~~~~~~~----~lga~~--vi~~~~~~~~~~~~~i~~ 268 (373)
....+++|++||=+|+|+ |..+..+++.++ ..+|++++.++++.+.++ ++|.+. +++.+. .++... ..
T Consensus 246 ~~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~---~~~~~~-~~ 320 (434)
T PRK14901 246 PLLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADS---RNLLEL-KP 320 (434)
T ss_pred HHhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCCh---hhcccc-cc
Confidence 345778999999998865 555556666653 238999999999887764 467643 333222 111000 00
Q ss_pred hcCCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEE
Q 017335 269 MTDGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 269 ~~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~ 304 (373)
...+.||.|+ | |+|. ...+..+++.+++| |+++..
T Consensus 321 ~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpg-G~lvys 383 (434)
T PRK14901 321 QWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPG-GTLVYA 383 (434)
T ss_pred cccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEE
Confidence 1123799998 5 4442 13477889999997 988744
No 478
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.72 E-value=0.25 Score=50.56 Aligned_cols=93 Identities=13% Similarity=0.070 Sum_probs=60.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH-HcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~-~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
.+++|+|+|+|++|.+++..+...|+ +|+++.++.++.+.+. .++.. ++... ++ .+......|++++|
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~-----~~----~~~~~~~~diiINt 446 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLA-----DL----ENFHPEEGMILANT 446 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHh-----Hh----hhhccccCeEEEec
Confidence 46799999999999999999999999 9999999888766654 34432 22111 11 11111257899988
Q ss_pred CCCHHH-----HHHHHHHhccCCceEEEEcc
Q 017335 281 IGLTSV-----MNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 281 ~g~~~~-----~~~~~~~l~~~~G~~v~~G~ 306 (373)
++.... ...-...+++. +.++++-.
T Consensus 447 T~vGm~~~~~~~pl~~~~l~~~-~~v~D~vY 476 (529)
T PLN02520 447 TSVGMQPNVDETPISKHALKHY-SLVFDAVY 476 (529)
T ss_pred ccCCCCCCCCCCcccHhhCCCC-CEEEEecc
Confidence 763320 01123456775 77777754
No 479
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.71 E-value=0.46 Score=43.55 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=48.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhHHHHH-HH----cCCc-eEEcCCCCCCccHHHHHHHhcC--
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KK----FGIT-DFINPATCGDKTVSQVIKEMTD-- 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~-~~~~~~~~-~~----lga~-~vi~~~~~~~~~~~~~i~~~~~-- 271 (373)
.++++||+|+ +++|.+.+..+...|+ +|+.+.+ ++++.+.+ +. .+.. +.+..+-...+++.+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 5789999998 8999999998889999 7877754 44443332 21 2322 2222222112333333333322
Q ss_pred CCccEEEECCC
Q 017335 272 GGADYCFECIG 282 (373)
Q Consensus 272 ~~~d~vid~~g 282 (373)
+.+|+++++.|
T Consensus 86 g~id~lv~nAg 96 (260)
T PRK08416 86 DRVDFFISNAI 96 (260)
T ss_pred CCccEEEECcc
Confidence 37899998875
No 480
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=93.70 E-value=0.74 Score=40.74 Aligned_cols=34 Identities=32% Similarity=0.412 Sum_probs=30.8
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~ 236 (373)
+.+|+|+|+|++|...+..+-..|.+++..+|.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4789999999999999999999999889888864
No 481
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.70 E-value=0.21 Score=45.81 Aligned_cols=75 Identities=19% Similarity=0.255 Sum_probs=48.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCce-EEcCCCCCCccHHHHHHHhcC--CCccEE
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGADYC 277 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~-vi~~~~~~~~~~~~~i~~~~~--~~~d~v 277 (373)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++.+. ..... ..|-.+ ..++.+.+.+... +.+|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 9999999999999999 89998887655321 11111 122222 1233333333222 378999
Q ss_pred EECCC
Q 017335 278 FECIG 282 (373)
Q Consensus 278 id~~g 282 (373)
+.+.|
T Consensus 82 i~~Ag 86 (266)
T PRK06171 82 VNNAG 86 (266)
T ss_pred EECCc
Confidence 99877
No 482
>PRK05855 short chain dehydrogenase; Validated
Probab=93.68 E-value=0.33 Score=49.80 Aligned_cols=81 Identities=16% Similarity=0.200 Sum_probs=52.2
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhcC--CC
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 273 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~~--~~ 273 (373)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++.+.+. +.|.. .++..+-.....+.+.+.+... +.
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3578999998 9999999988888999 8999999887765543 23432 2222221111223333333222 36
Q ss_pred ccEEEECCCC
Q 017335 274 ADYCFECIGL 283 (373)
Q Consensus 274 ~d~vid~~g~ 283 (373)
+|+++++.|.
T Consensus 393 id~lv~~Ag~ 402 (582)
T PRK05855 393 PDIVVNNAGI 402 (582)
T ss_pred CcEEEECCcc
Confidence 8999999874
No 483
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=93.68 E-value=0.46 Score=42.77 Aligned_cols=84 Identities=11% Similarity=0.166 Sum_probs=55.4
Q ss_pred EEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh--HHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335 206 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (373)
Q Consensus 206 VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~--~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 282 (373)
|+|+|+ |.+|...++.+...+. +|.++.|+.. ....++..|+..+ ..+- +-.+.+.+... ++|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~----~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY----DDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc----CCHHHHHHHHc-CCceEEeecC
Confidence 789998 9999999999999888 8999998764 3555677888544 3322 11223333222 8999998888
Q ss_pred C---HH--HHHHHHHHhcc
Q 017335 283 L---TS--VMNDAFNSSRE 296 (373)
Q Consensus 283 ~---~~--~~~~~~~~l~~ 296 (373)
. .. ....+.++.+.
T Consensus 74 ~~~~~~~~~~~~li~Aa~~ 92 (233)
T PF05368_consen 74 PSHPSELEQQKNLIDAAKA 92 (233)
T ss_dssp CSCCCHHHHHHHHHHHHHH
T ss_pred cchhhhhhhhhhHHHhhhc
Confidence 3 22 23345555555
No 484
>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional
Probab=93.68 E-value=1.2 Score=42.63 Aligned_cols=97 Identities=18% Similarity=0.134 Sum_probs=61.2
Q ss_pred HHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH---HH-cCC---ceEEcCCCCCCccHHHHHH
Q 017335 195 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG---KK-FGI---TDFINPATCGDKTVSQVIK 267 (373)
Q Consensus 195 ~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~---~~-lga---~~vi~~~~~~~~~~~~~i~ 267 (373)
.......+|.+||-+|+|. |..+..+++. |...|++++.++.-.... ++ .+. -+++.. + +.
T Consensus 115 ~~~l~~l~g~~VLDIGCG~-G~~~~~la~~-g~~~V~GiD~S~~~l~q~~a~~~~~~~~~~i~~~~~------d----~e 182 (322)
T PRK15068 115 LPHLSPLKGRTVLDVGCGN-GYHMWRMLGA-GAKLVVGIDPSQLFLCQFEAVRKLLGNDQRAHLLPL------G----IE 182 (322)
T ss_pred HHhhCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHhcCCCCCeEEEeC------C----HH
Confidence 3344445789999999987 7777788776 555799999887543322 12 221 112211 1 12
Q ss_pred Hhc-CCCccEEEECC-----C-CHHHHHHHHHHhccCCceEEEE
Q 017335 268 EMT-DGGADYCFECI-----G-LTSVMNDAFNSSREGWGKTVIL 304 (373)
Q Consensus 268 ~~~-~~~~d~vid~~-----g-~~~~~~~~~~~l~~~~G~~v~~ 304 (373)
++. ++.||+|+... . -...+..+.+.|++| |++++-
T Consensus 183 ~lp~~~~FD~V~s~~vl~H~~dp~~~L~~l~~~LkpG-G~lvl~ 225 (322)
T PRK15068 183 QLPALKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPG-GELVLE 225 (322)
T ss_pred HCCCcCCcCEEEECChhhccCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 222 34799999632 1 134588999999997 998864
No 485
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=93.64 E-value=0.34 Score=51.22 Aligned_cols=81 Identities=20% Similarity=0.288 Sum_probs=52.4
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-----cCCc--eEEcCCCCCCccHHHHHHHhc--C
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGIT--DFINPATCGDKTVSQVIKEMT--D 271 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-----lga~--~vi~~~~~~~~~~~~~i~~~~--~ 271 (373)
.++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ .+.. ..+..+-....++.+.+.+.. -
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3789999998 9999999998888999 99999998876654421 2321 122222211133333333332 2
Q ss_pred CCccEEEECCCC
Q 017335 272 GGADYCFECIGL 283 (373)
Q Consensus 272 ~~~d~vid~~g~ 283 (373)
+++|++|++.|.
T Consensus 492 g~iDilV~nAG~ 503 (676)
T TIGR02632 492 GGVDIVVNNAGI 503 (676)
T ss_pred CCCcEEEECCCC
Confidence 379999998874
No 486
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=93.64 E-value=1 Score=44.86 Aligned_cols=101 Identities=14% Similarity=0.244 Sum_probs=64.7
Q ss_pred HHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHH----HcCCc-eEEcCCCCCCccHHHHHHHhc
Q 017335 196 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT 270 (373)
Q Consensus 196 ~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~----~lga~-~vi~~~~~~~~~~~~~i~~~~ 270 (373)
....+++|++||=+|+|+ |..+..+++..+..+|++++.++++.+.++ ++|.. .++..+. .+. ....
T Consensus 238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~---~~~----~~~~ 309 (427)
T PRK10901 238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDA---RDP----AQWW 309 (427)
T ss_pred HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCc---ccc----hhhc
Confidence 345678999999998865 555566666654239999999998877764 35542 3343332 111 1111
Q ss_pred -CCCccEEE-E--CCCC-------------------------HHHHHHHHHHhccCCceEEEEc
Q 017335 271 -DGGADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 271 -~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~G 305 (373)
.+.||.|+ | |++. ...+..+++.|++| |+++..-
T Consensus 310 ~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvyst 372 (427)
T PRK10901 310 DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYAT 372 (427)
T ss_pred ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 23799998 3 3331 13577888999997 9988543
No 487
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.62 E-value=0.48 Score=49.56 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=59.4
Q ss_pred CCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEECCC
Q 017335 203 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 282 (373)
Q Consensus 203 ~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~~g 282 (373)
.++|+|.|.|.+|+..++.++..|. +++++|.++++.+.+++.|.. ++..+. .+.+. +++.--+.+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~-v~~GDa-t~~~~---L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMK-VFYGDA-TRMDL---LESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCe-EEEEeC-CCHHH---HHhcCCCcCCEEEEEeC
Confidence 4689999999999999999999999 899999999999999988864 444443 12332 33322227999999998
Q ss_pred CHH
Q 017335 283 LTS 285 (373)
Q Consensus 283 ~~~ 285 (373)
+..
T Consensus 474 d~~ 476 (621)
T PRK03562 474 DPQ 476 (621)
T ss_pred CHH
Confidence 866
No 488
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=93.61 E-value=0.2 Score=46.89 Aligned_cols=96 Identities=18% Similarity=0.045 Sum_probs=63.4
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHH-cCCceEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 279 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~-lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid 279 (373)
..+.+|+|+|+|++|.+++..+...|+.+|+++.++.++.+.+.+ ++....+.. . .+. .+. -..+|+|++
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~----~~~-~~~~DivIn 191 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LEL----QEE-LADFDLIIN 191 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccc----hhc-cccCCEEEE
Confidence 457799999999999999999999996699999999988766543 332110100 0 000 011 127999999
Q ss_pred CCCCHHH-----HHHHHHHhccCCceEEEEcc
Q 017335 280 CIGLTSV-----MNDAFNSSREGWGKTVILGV 306 (373)
Q Consensus 280 ~~g~~~~-----~~~~~~~l~~~~G~~v~~G~ 306 (373)
|++.... .......++++ ..++++-.
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~DivY 222 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMIY 222 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence 9875431 01234567786 88888844
No 489
>PF05185 PRMT5: PRMT5 arginine-N-methyltransferase; InterPro: IPR007857 The human homologue of Saccharomyces cerevisiae Skb1 (Shk1 kinase-binding protein 1) is a protein methyltransferase []. These proteins seem to play a role in Jak signalling.; GO: 0008168 methyltransferase activity, 0005737 cytoplasm; PDB: 2Y1W_C 2Y1X_D 2V7E_B 2V74_H 3R0Q_G 3B3F_B 3B3J_A 3B3G_A 3UA3_A 3UA4_B ....
Probab=93.60 E-value=0.31 Score=48.80 Aligned_cols=133 Identities=14% Similarity=0.121 Sum_probs=63.3
Q ss_pred ceeeeEEeeccceEEcCCCCChhhhhccchh------hhh-HHHHHHHHhCCC----CCCEEEEECC--ChHHHHHHHHH
Q 017335 156 SFTEYSVVDITHVVKITPHIPLGIACLLSCG------VST-GVGAAWKVAGVE----VGSTVAIFGL--GAVGLAVAEGA 222 (373)
Q Consensus 156 ~~a~~~~v~~~~~~~lP~~l~~~~aa~l~~~------~~t-a~~~~~~~~~~~----~~~~VlI~G~--G~vG~~a~~la 222 (373)
+|.+|.+.| +-++-|+|+......+.-. +-. ...++.+...-. .+..|+++|+ |++...+++.+
T Consensus 132 ~~~d~Lq~P---LqPl~dnL~s~tYe~fE~D~vKY~~Ye~AI~~al~D~~~~~~~~~~~~vVldVGAGrGpL~~~al~A~ 208 (448)
T PF05185_consen 132 GYEDYLQAP---LQPLMDNLESQTYEVFEKDPVKYDQYERAIEEALKDRVRKNSYSSKDKVVLDVGAGRGPLSMFALQAG 208 (448)
T ss_dssp -----EE-------TTTS---HHHHHHHCC-HHHHHHHHHHHHHHHHHHHTTS-SEETT-EEEEES-TTSHHHHHHHHTT
T ss_pred hchhhccCC---CCCchhhhccccHhhHhcCHHHHHHHHHHHHHHHHhhhhhccccccceEEEEeCCCccHHHHHHHHHH
Confidence 577777765 5566677764444433211 001 122233433333 2568999987 67777777776
Q ss_pred HH-CCCCeEEEEcCChhHHHHH----HHcC---CceEEcCCCCCCccHHHHHHHhcCC-CccEEE-ECCCC-------HH
Q 017335 223 RL-NRASKIIGVDINPEKFEIG----KKFG---ITDFINPATCGDKTVSQVIKEMTDG-GADYCF-ECIGL-------TS 285 (373)
Q Consensus 223 ~~-~G~~~Vi~~~~~~~~~~~~----~~lg---a~~vi~~~~~~~~~~~~~i~~~~~~-~~d~vi-d~~g~-------~~ 285 (373)
+. .++.+|++++.++.....+ ++-+ .-.|++.+- +++... ++|+++ +..|+ +.
T Consensus 209 ~~~~~a~~VyAVEkn~~A~~~l~~~v~~n~w~~~V~vi~~d~----------r~v~lpekvDIIVSElLGsfg~nEl~pE 278 (448)
T PF05185_consen 209 ARAGGAVKVYAVEKNPNAVVTLQKRVNANGWGDKVTVIHGDM----------REVELPEKVDIIVSELLGSFGDNELSPE 278 (448)
T ss_dssp HHHCCESEEEEEESSTHHHHHHHHHHHHTTTTTTEEEEES-T----------TTSCHSS-EEEEEE---BTTBTTTSHHH
T ss_pred HHhCCCeEEEEEcCCHhHHHHHHHHHHhcCCCCeEEEEeCcc----------cCCCCCCceeEEEEeccCCccccccCHH
Confidence 54 4456999999987654443 3322 334665543 333323 899999 55553 22
Q ss_pred HHHHHHHHhccCCceEE
Q 017335 286 VMNDAFNSSREGWGKTV 302 (373)
Q Consensus 286 ~~~~~~~~l~~~~G~~v 302 (373)
.+...-+.|+++ |.++
T Consensus 279 ~Lda~~rfLkp~-Gi~I 294 (448)
T PF05185_consen 279 CLDAADRFLKPD-GIMI 294 (448)
T ss_dssp HHHHGGGGEEEE-EEEE
T ss_pred HHHHHHhhcCCC-CEEe
Confidence 344555567786 7654
No 490
>PRK06436 glycerate dehydrogenase; Provisional
Probab=93.59 E-value=0.34 Score=45.91 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=32.1
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 237 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~ 237 (373)
.|++|.|+|.|.+|...+++++.+|. +|++.+++.
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~ 155 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSY 155 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCC
Confidence 58999999999999999999999999 999999763
No 491
>PRK08278 short chain dehydrogenase; Provisional
Probab=93.59 E-value=0.4 Score=44.42 Aligned_cols=36 Identities=33% Similarity=0.380 Sum_probs=31.1
Q ss_pred CCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChh
Q 017335 202 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 238 (373)
Q Consensus 202 ~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~ 238 (373)
.+.++||+|+ |++|...++.+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4678999998 9999999998888999 8999988654
No 492
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.58 E-value=0.28 Score=46.11 Aligned_cols=92 Identities=15% Similarity=0.131 Sum_probs=57.4
Q ss_pred EEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC--ccHHHHHHHhcCCCccEEEECCC
Q 017335 205 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD--KTVSQVIKEMTDGGADYCFECIG 282 (373)
Q Consensus 205 ~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~--~~~~~~i~~~~~~~~d~vid~~g 282 (373)
+|+|+|+|.+|.+.+..+...|. +|..+++++++.+.+++.|... + +.... ........+. +.+|+||-++.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence 58999999999998888888898 8999998888777777656421 1 00000 0000011111 37899999988
Q ss_pred CHHHHHHHHHHh----ccCCceEEEE
Q 017335 283 LTSVMNDAFNSS----REGWGKTVIL 304 (373)
Q Consensus 283 ~~~~~~~~~~~l----~~~~G~~v~~ 304 (373)
... ...+++.+ .++ ..++.+
T Consensus 76 ~~~-~~~~~~~l~~~l~~~-~~iv~~ 99 (304)
T PRK06522 76 AYQ-LPAALPSLAPLLGPD-TPVLFL 99 (304)
T ss_pred ccc-HHHHHHHHhhhcCCC-CEEEEe
Confidence 655 44444444 343 455554
No 493
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.58 E-value=0.79 Score=43.65 Aligned_cols=87 Identities=23% Similarity=0.262 Sum_probs=59.9
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCCCccEEEEC
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 280 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~~~d~vid~ 280 (373)
-.+++|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|+. +. ++.+.+ ...|+|+-+
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaa-----k~ADVV~ll 78 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAV-----RTAQVVQML 78 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHH-----hcCCEEEEe
Confidence 358899999999999999999999999 888876655555556666763 21 122222 168999988
Q ss_pred CCCHHH---H-HHHHHHhccCCceEEE
Q 017335 281 IGLTSV---M-NDAFNSSREGWGKTVI 303 (373)
Q Consensus 281 ~g~~~~---~-~~~~~~l~~~~G~~v~ 303 (373)
+..+.. + ...+..|+++ ..+++
T Consensus 79 LPd~~t~~V~~~eil~~MK~G-aiL~f 104 (335)
T PRK13403 79 LPDEQQAHVYKAEVEENLREG-QMLLF 104 (335)
T ss_pred CCChHHHHHHHHHHHhcCCCC-CEEEE
Confidence 876442 2 3456677885 55443
No 494
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.55 E-value=0.79 Score=43.91 Aligned_cols=95 Identities=19% Similarity=0.136 Sum_probs=63.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHH-HCCCCeEEEEcCChhHHHHHH-Hc----CCceEEcCCCCCCccHHHHHHHhcCCCc
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KF----GITDFINPATCGDKTVSQVIKEMTDGGA 274 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~-~~G~~~Vi~~~~~~~~~~~~~-~l----ga~~vi~~~~~~~~~~~~~i~~~~~~~~ 274 (373)
+...+++|+|+|..|.+.+..+. ..++++|.+..++.++.+.+. ++ |.. +... .+..+.+ ..+
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av-----~~a 195 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAM-----SGA 195 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHh-----ccC
Confidence 44568999999999988877776 578778999999998866553 33 432 2211 1232222 269
Q ss_pred cEEEECCCCHHHHHHHHHHhccCCceEEEEcccC
Q 017335 275 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEM 308 (373)
Q Consensus 275 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~~ 308 (373)
|+|+.|+++.. .--..+.++++ -.+..+|...
T Consensus 196 DiVvtaT~s~~-p~i~~~~l~~g-~~i~~vg~~~ 227 (326)
T TIGR02992 196 DIIVTTTPSET-PILHAEWLEPG-QHVTAMGSDA 227 (326)
T ss_pred CEEEEecCCCC-cEecHHHcCCC-cEEEeeCCCC
Confidence 99999988654 11123468886 7888888653
No 495
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.52 E-value=0.81 Score=38.14 Aligned_cols=94 Identities=15% Similarity=0.095 Sum_probs=64.3
Q ss_pred ccchhhhhHHHHHHHHhCC-CCCCEEEEECC-ChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCC
Q 017335 182 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 259 (373)
Q Consensus 182 ~l~~~~~ta~~~~~~~~~~-~~~~~VlI~G~-G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~ 259 (373)
.+++....... +++..++ -.|++|+|+|. ..+|.-++.++...|+ +|..+.+...
T Consensus 7 ~~p~t~~a~~~-ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~--------------------- 63 (140)
T cd05212 7 FVSPVAKAVKE-LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI--------------------- 63 (140)
T ss_pred ccccHHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------
Confidence 34444443333 3444444 46999999998 7899999999999998 8888875422
Q ss_pred ccHHHHHHHhcCCCccEEEECCCCHHHHHHHHHHhccCCceEEEEccc
Q 017335 260 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 307 (373)
Q Consensus 260 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~G~~ 307 (373)
++.+.+ ..+|+|+-++|....+. -+.+++| ..++.+|..
T Consensus 64 -~l~~~v-----~~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~ 102 (140)
T cd05212 64 -QLQSKV-----HDADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPT 102 (140)
T ss_pred -CHHHHH-----hhCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCC
Confidence 121112 16899999999876443 4569997 888888763
No 496
>PRK06153 hypothetical protein; Provisional
Probab=93.51 E-value=0.27 Score=47.78 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=31.5
Q ss_pred CCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCC
Q 017335 202 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 236 (373)
Q Consensus 202 ~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~ 236 (373)
.+.+|+|+|+|++|..++..+-.+|..+++.+|.+
T Consensus 175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 45799999999999999999999999899998865
No 497
>PLN02396 hexaprenyldihydroxybenzoate methyltransferase
Probab=93.50 E-value=0.31 Score=46.55 Aligned_cols=97 Identities=20% Similarity=0.172 Sum_probs=60.2
Q ss_pred CCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC----CceEEcCCCCCCccHHHHHHHhcCCCcc
Q 017335 200 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG----ITDFINPATCGDKTVSQVIKEMTDGGAD 275 (373)
Q Consensus 200 ~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg----a~~vi~~~~~~~~~~~~~i~~~~~~~~d 275 (373)
..++.+||=+|+|. |..+..+++ .|+ +|+++|.+++..+.++... ...-+.... .+. +.+. ..++.||
T Consensus 129 ~~~g~~ILDIGCG~-G~~s~~La~-~g~-~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~---~da-e~l~-~~~~~FD 200 (322)
T PLN02396 129 PFEGLKFIDIGCGG-GLLSEPLAR-MGA-TVTGVDAVDKNVKIARLHADMDPVTSTIEYLC---TTA-EKLA-DEGRKFD 200 (322)
T ss_pred CCCCCEEEEeeCCC-CHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHhcCcccceeEEe---cCH-HHhh-hccCCCC
Confidence 34677999999865 555555554 577 9999999999888886421 100011111 111 1111 1223799
Q ss_pred EEEEC-----C-CCHHHHHHHHHHhccCCceEEEEc
Q 017335 276 YCFEC-----I-GLTSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 276 ~vid~-----~-g~~~~~~~~~~~l~~~~G~~v~~G 305 (373)
+|+.. + .....+..+.+.|++| |.+++.-
T Consensus 201 ~Vi~~~vLeHv~d~~~~L~~l~r~LkPG-G~liist 235 (322)
T PLN02396 201 AVLSLEVIEHVANPAEFCKSLSALTIPN-GATVLST 235 (322)
T ss_pred EEEEhhHHHhcCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence 99842 2 2234678889999997 9988663
No 498
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.50 E-value=1.2 Score=42.61 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=33.8
Q ss_pred CEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHH
Q 017335 204 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 243 (373)
Q Consensus 204 ~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~ 243 (373)
.+|.|+|+|.+|...++.+...|+ +|.+.+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 589999999999998888888999 999999998765543
No 499
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]
Probab=93.49 E-value=0.46 Score=42.34 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=73.4
Q ss_pred HHHHhCCCCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcCCceEEcCCCCCCccHHHHHHHhcCC-
Q 017335 194 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG- 272 (373)
Q Consensus 194 ~~~~~~~~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lga~~vi~~~~~~~~~~~~~i~~~~~~- 272 (373)
++....+..-.+|.-+|+|+ |..+-.+++.-.-..|.+++++++-++.++....+.-+.. ..++++.+.
T Consensus 22 Lla~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~~---------aDl~~w~p~~ 91 (257)
T COG4106 22 LLARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFEE---------ADLRTWKPEQ 91 (257)
T ss_pred HHhhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCceec---------ccHhhcCCCC
Confidence 44556677788899999998 8899999998775599999999999999887665433221 235667666
Q ss_pred CccEEEECCC------CHHHHHHHHHHhccCCceEE
Q 017335 273 GADYCFECIG------LTSVMNDAFNSSREGWGKTV 302 (373)
Q Consensus 273 ~~d~vid~~g------~~~~~~~~~~~l~~~~G~~v 302 (373)
..|++|-..- ....+..++..|.+| |.+.
T Consensus 92 ~~dllfaNAvlqWlpdH~~ll~rL~~~L~Pg-g~LA 126 (257)
T COG4106 92 PTDLLFANAVLQWLPDHPELLPRLVSQLAPG-GVLA 126 (257)
T ss_pred ccchhhhhhhhhhccccHHHHHHHHHhhCCC-ceEE
Confidence 7899884322 345689999999997 8754
No 500
>PRK03612 spermidine synthase; Provisional
Probab=93.49 E-value=0.46 Score=48.59 Aligned_cols=96 Identities=16% Similarity=0.185 Sum_probs=63.6
Q ss_pred CCCCEEEEECCChHHHHHHHHHHHCCCCeEEEEcCChhHHHHHHHcC-C------------ceEEcCCCCCCccHHHHHH
Q 017335 201 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-I------------TDFINPATCGDKTVSQVIK 267 (373)
Q Consensus 201 ~~~~~VlI~G~G~vG~~a~~la~~~G~~~Vi~~~~~~~~~~~~~~lg-a------------~~vi~~~~~~~~~~~~~i~ 267 (373)
++.++||++|+|. |..+.++++.-+.++|++++.+++-.+.+++.. . -+++. .|..+.++
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~------~Da~~~l~ 368 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVN------DDAFNWLR 368 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEE------ChHHHHHH
Confidence 4568999999875 667777777655459999999999988887621 0 01222 23333333
Q ss_pred HhcCCCccEEE-ECCCC----------HHHHHHHHHHhccCCceEEEEc
Q 017335 268 EMTDGGADYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILG 305 (373)
Q Consensus 268 ~~~~~~~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~G 305 (373)
+ .++.+|+|+ |.... .+.++.+.+.|+++ |.++.-.
T Consensus 369 ~-~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 369 K-LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred h-CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 2 234899999 43321 12467889999997 9988654
Done!