Query 017336
Match_columns 373
No_of_seqs 138 out of 1514
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 07:40:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017336.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017336hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 1.3E-66 2.8E-71 457.1 31.7 366 2-371 1-366 (366)
2 COG1064 AdhP Zn-dependent alco 100.0 2.1E-65 4.5E-70 459.9 31.8 335 1-372 1-338 (339)
3 KOG0022 Alcohol dehydrogenase, 100.0 2E-64 4.3E-69 436.0 32.0 369 3-371 7-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 1.4E-59 3E-64 409.1 30.0 342 3-373 4-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 3.7E-56 8.1E-61 386.6 28.3 339 4-372 10-355 (360)
6 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.8E-55 6E-60 414.6 35.8 367 4-371 2-368 (368)
7 PLN02740 Alcohol dehydrogenase 100.0 5.4E-55 1.2E-59 414.5 35.8 371 1-371 8-381 (381)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 7.5E-55 1.6E-59 412.4 36.5 361 4-369 1-370 (371)
9 cd08301 alcohol_DH_plants Plan 100.0 1.4E-54 3E-59 410.5 35.7 367 3-369 2-368 (369)
10 cd08300 alcohol_DH_class_III c 100.0 1.6E-54 3.4E-59 409.8 36.0 367 3-370 2-368 (368)
11 PLN02827 Alcohol dehydrogenase 100.0 2.1E-53 4.5E-58 402.7 35.4 366 3-372 12-377 (378)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 5.3E-53 1.1E-57 398.0 34.4 356 3-371 1-358 (358)
13 cd08277 liver_alcohol_DH_like 100.0 1.7E-52 3.6E-57 395.5 35.9 364 3-370 2-365 (365)
14 cd08239 THR_DH_like L-threonin 100.0 6.6E-52 1.4E-56 388.0 33.6 337 4-371 1-339 (339)
15 COG1063 Tdh Threonine dehydrog 100.0 2.9E-50 6.3E-55 375.6 33.0 343 4-371 1-350 (350)
16 PRK09880 L-idonate 5-dehydroge 100.0 2.4E-50 5.3E-55 377.7 32.6 335 3-371 4-343 (343)
17 COG0604 Qor NADPH:quinone redu 100.0 4.1E-50 9E-55 369.8 29.4 315 4-371 1-326 (326)
18 TIGR02819 fdhA_non_GSH formald 100.0 9.9E-50 2.1E-54 378.3 31.5 345 3-372 2-391 (393)
19 PRK10309 galactitol-1-phosphat 100.0 2.2E-48 4.8E-53 365.3 33.7 339 4-372 1-347 (347)
20 cd08299 alcohol_DH_class_I_II_ 100.0 8.1E-48 1.8E-52 364.2 36.1 366 3-371 7-373 (373)
21 PLN02586 probable cinnamyl alc 100.0 3.6E-48 7.7E-53 364.8 31.2 337 4-371 13-353 (360)
22 cd08230 glucose_DH Glucose deh 100.0 6.9E-48 1.5E-52 362.9 31.5 334 4-371 1-355 (355)
23 cd05279 Zn_ADH1 Liver alcohol 100.0 3.2E-47 6.9E-52 359.5 35.5 364 4-370 1-365 (365)
24 TIGR03201 dearomat_had 6-hydro 100.0 2.1E-47 4.6E-52 358.7 33.2 332 7-370 2-348 (349)
25 PLN02178 cinnamyl-alcohol dehy 100.0 1.1E-47 2.3E-52 362.6 31.0 338 3-371 4-348 (375)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.8E-47 8.2E-52 353.6 30.9 320 7-369 2-328 (329)
27 cd08231 MDR_TM0436_like Hypoth 100.0 1.4E-46 2.9E-51 355.1 35.0 348 5-371 2-361 (361)
28 cd08233 butanediol_DH_like (2R 100.0 1.6E-46 3.5E-51 353.2 34.0 335 4-370 1-351 (351)
29 KOG1197 Predicted quinone oxid 100.0 1.3E-47 2.7E-52 322.1 22.5 313 3-372 8-331 (336)
30 cd08278 benzyl_alcohol_DH Benz 100.0 1.6E-45 3.4E-50 348.0 35.5 362 2-370 1-365 (365)
31 PLN02514 cinnamyl-alcohol dehy 100.0 7.5E-46 1.6E-50 348.9 31.5 338 4-372 10-351 (357)
32 cd08279 Zn_ADH_class_III Class 100.0 2.6E-44 5.7E-49 339.6 35.7 360 4-369 1-362 (363)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 2.3E-44 5E-49 338.6 34.8 342 4-371 1-351 (351)
34 cd08237 ribitol-5-phosphate_DH 100.0 4.1E-45 8.9E-50 341.8 26.7 321 3-372 2-340 (341)
35 PRK10083 putative oxidoreducta 100.0 8.4E-44 1.8E-48 333.3 33.4 335 4-373 1-339 (339)
36 cd05278 FDH_like Formaldehyde 100.0 1.8E-43 3.8E-48 332.1 33.8 340 4-370 1-346 (347)
37 cd08296 CAD_like Cinnamyl alco 100.0 1.8E-43 3.9E-48 330.1 32.3 330 4-370 1-333 (333)
38 cd08238 sorbose_phosphate_red 100.0 2E-43 4.4E-48 338.1 32.0 331 2-371 1-368 (410)
39 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.3E-43 2.7E-48 327.1 27.6 303 3-370 1-308 (308)
40 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.1E-42 2.3E-47 327.1 33.4 336 4-369 1-350 (350)
41 cd08286 FDH_like_ADH2 formalde 100.0 1.2E-42 2.7E-47 326.1 33.0 337 4-371 1-345 (345)
42 cd08283 FDH_like_1 Glutathione 100.0 1.6E-42 3.5E-47 329.7 33.7 356 4-370 1-385 (386)
43 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2.5E-42 5.4E-47 324.1 33.6 338 4-370 1-344 (345)
44 cd08240 6_hydroxyhexanoate_dh_ 100.0 2.1E-42 4.6E-47 325.2 32.5 336 4-370 1-349 (350)
45 cd05284 arabinose_DH_like D-ar 100.0 8E-42 1.7E-46 320.0 33.0 332 4-371 1-340 (340)
46 cd08263 Zn_ADH10 Alcohol dehyd 100.0 9.4E-42 2E-46 322.7 33.1 360 4-370 1-367 (367)
47 PRK05396 tdh L-threonine 3-deh 100.0 1.3E-41 2.8E-46 318.7 33.6 337 4-372 1-341 (341)
48 cd08284 FDH_like_2 Glutathione 100.0 3.1E-41 6.8E-46 316.5 33.5 338 4-370 1-343 (344)
49 cd08246 crotonyl_coA_red croto 100.0 4.5E-41 9.8E-46 320.8 32.5 338 2-369 11-391 (393)
50 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.1E-40 2.3E-45 312.0 34.0 333 4-371 1-337 (337)
51 PLN02702 L-idonate 5-dehydroge 100.0 9.3E-41 2E-45 315.6 33.5 336 4-370 18-363 (364)
52 cd08291 ETR_like_1 2-enoyl thi 100.0 4.1E-41 8.9E-46 313.1 29.1 309 4-370 1-324 (324)
53 cd08235 iditol_2_DH_like L-idi 100.0 2.7E-40 5.8E-45 310.1 33.4 336 4-370 1-343 (343)
54 cd08282 PFDH_like Pseudomonas 100.0 2.1E-40 4.6E-45 314.1 33.0 346 4-371 1-375 (375)
55 cd08242 MDR_like Medium chain 100.0 1.8E-40 4E-45 308.1 31.4 317 4-370 1-318 (319)
56 cd08262 Zn_ADH8 Alcohol dehydr 100.0 2.2E-40 4.9E-45 310.3 32.2 325 4-370 1-341 (341)
57 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.1E-40 6.7E-45 313.9 33.4 327 15-369 38-383 (384)
58 cd05281 TDH Threonine dehydrog 100.0 4.7E-40 1E-44 308.1 33.4 336 4-370 1-340 (341)
59 PRK13771 putative alcohol dehy 100.0 1.9E-40 4.1E-45 309.9 30.3 330 4-371 1-333 (334)
60 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 4.7E-40 1E-44 307.6 33.0 334 4-371 1-338 (338)
61 cd08287 FDH_like_ADH3 formalde 100.0 4.7E-40 1E-44 308.6 32.8 334 4-370 1-344 (345)
62 cd05285 sorbitol_DH Sorbitol d 100.0 5.4E-40 1.2E-44 308.0 32.8 334 6-369 1-341 (343)
63 TIGR01751 crot-CoA-red crotony 100.0 4E-40 8.7E-45 314.6 32.1 339 3-371 7-387 (398)
64 cd05283 CAD1 Cinnamyl alcohol 100.0 3.8E-40 8.2E-45 308.2 30.5 334 5-370 1-337 (337)
65 PLN03154 putative allyl alcoho 100.0 4.9E-40 1.1E-44 308.1 29.8 310 4-372 9-346 (348)
66 PRK09422 ethanol-active dehydr 100.0 1.6E-39 3.5E-44 304.2 32.1 332 4-372 1-337 (338)
67 TIGR00692 tdh L-threonine 3-de 100.0 3.6E-39 7.8E-44 302.0 33.5 333 9-371 4-340 (340)
68 cd08236 sugar_DH NAD(P)-depend 100.0 3.6E-39 7.9E-44 302.4 33.0 336 4-369 1-343 (343)
69 TIGR03366 HpnZ_proposed putati 100.0 2.4E-40 5.1E-45 301.4 23.7 269 60-352 1-280 (280)
70 cd08259 Zn_ADH5 Alcohol dehydr 100.0 5.6E-39 1.2E-43 299.5 32.0 329 4-370 1-332 (332)
71 cd08292 ETR_like_2 2-enoyl thi 100.0 3E-39 6.6E-44 300.4 30.0 308 4-369 1-323 (324)
72 cd08232 idonate-5-DH L-idonate 100.0 7E-39 1.5E-43 300.0 32.3 332 9-371 3-339 (339)
73 cd08297 CAD3 Cinnamyl alcohol 100.0 1.3E-38 2.8E-43 298.4 33.8 334 4-371 1-341 (341)
74 cd08295 double_bond_reductase_ 100.0 3.4E-39 7.3E-44 301.9 29.6 310 4-371 8-338 (338)
75 KOG0025 Zn2+-binding dehydroge 100.0 2.6E-39 5.6E-44 276.8 25.8 313 4-372 20-353 (354)
76 cd08234 threonine_DH_like L-th 100.0 3.1E-38 6.8E-43 294.9 33.3 332 4-369 1-333 (334)
77 cd08293 PTGR2 Prostaglandin re 100.0 2E-38 4.4E-43 297.6 30.9 299 16-371 23-345 (345)
78 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.4E-38 3E-43 296.2 29.3 318 4-365 1-321 (325)
79 cd08245 CAD Cinnamyl alcohol d 100.0 2.5E-38 5.3E-43 295.2 30.6 327 5-369 1-330 (330)
80 cd08266 Zn_ADH_like1 Alcohol d 100.0 5.1E-38 1.1E-42 293.8 31.6 334 4-370 1-341 (342)
81 cd08298 CAD2 Cinnamyl alcohol 100.0 4.4E-38 9.6E-43 293.3 30.8 322 4-368 1-328 (329)
82 cd08294 leukotriene_B4_DH_like 100.0 2.1E-38 4.7E-43 295.4 28.7 304 3-371 2-329 (329)
83 TIGR02825 B4_12hDH leukotriene 100.0 2.7E-38 5.9E-43 294.2 29.0 290 16-369 19-324 (325)
84 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.8E-37 3.9E-42 286.1 30.2 300 4-335 1-306 (306)
85 cd08274 MDR9 Medium chain dehy 100.0 1.8E-37 3.9E-42 291.7 29.6 322 4-370 1-349 (350)
86 PRK10754 quinone oxidoreductas 100.0 3.3E-37 7E-42 287.2 27.6 314 3-370 1-326 (327)
87 cd08290 ETR 2-enoyl thioester 100.0 4.8E-37 1E-41 287.8 28.2 314 4-371 1-341 (341)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 8.3E-37 1.8E-41 285.5 28.9 308 5-370 1-334 (336)
89 cd08244 MDR_enoyl_red Possible 100.0 5.3E-36 1.2E-40 278.5 30.7 312 4-371 1-324 (324)
90 cd08276 MDR7 Medium chain dehy 100.0 8.9E-36 1.9E-40 278.3 32.2 329 4-370 1-335 (336)
91 cd08250 Mgc45594_like Mgc45594 100.0 6.4E-36 1.4E-40 278.7 28.2 311 3-370 1-329 (329)
92 COG2130 Putative NADP-dependen 100.0 9.3E-36 2E-40 257.6 25.2 296 16-373 27-340 (340)
93 PTZ00354 alcohol dehydrogenase 100.0 2.7E-35 5.8E-40 274.9 30.0 314 3-372 1-329 (334)
94 cd08249 enoyl_reductase_like e 100.0 1.6E-35 3.5E-40 277.1 28.4 315 4-371 1-339 (339)
95 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 3.5E-35 7.5E-40 273.2 30.5 313 4-371 1-325 (325)
96 KOG1198 Zinc-binding oxidoredu 100.0 9.1E-36 2E-40 274.6 23.1 301 16-372 20-346 (347)
97 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.7E-34 3.6E-39 267.1 31.7 297 16-369 7-311 (312)
98 cd05282 ETR_like 2-enoyl thioe 100.0 6.8E-35 1.5E-39 271.0 29.2 298 16-370 14-323 (323)
99 cd08270 MDR4 Medium chain dehy 100.0 7.8E-35 1.7E-39 268.5 27.8 297 4-371 1-305 (305)
100 cd08243 quinone_oxidoreductase 100.0 8.1E-35 1.7E-39 269.9 27.8 311 4-369 1-319 (320)
101 cd08252 AL_MDR Arginate lyase 100.0 4.3E-34 9.3E-39 267.2 30.5 311 4-369 1-335 (336)
102 cd08289 MDR_yhfp_like Yhfp put 100.0 3.4E-34 7.3E-39 266.7 29.2 314 4-371 1-326 (326)
103 TIGR02823 oxido_YhdH putative 100.0 8.5E-34 1.8E-38 263.8 30.3 311 5-371 1-323 (323)
104 cd08248 RTN4I1 Human Reticulon 100.0 4.1E-34 8.9E-39 268.8 24.5 308 4-369 1-349 (350)
105 cd05286 QOR2 Quinone oxidoredu 100.0 9E-33 2E-37 255.5 30.4 308 5-370 1-319 (320)
106 cd08253 zeta_crystallin Zeta-c 100.0 7E-33 1.5E-37 257.0 29.6 315 4-371 1-325 (325)
107 cd08288 MDR_yhdh Yhdh putative 100.0 6.6E-33 1.4E-37 257.9 29.4 312 4-371 1-324 (324)
108 cd05188 MDR Medium chain reduc 100.0 4.4E-33 9.6E-38 251.9 26.2 268 30-331 1-270 (271)
109 cd05288 PGDH Prostaglandin deh 100.0 4.8E-33 1E-37 259.3 27.0 304 4-368 2-328 (329)
110 cd05276 p53_inducible_oxidored 100.0 1.2E-32 2.6E-37 255.0 29.5 308 4-368 1-322 (323)
111 cd08271 MDR5 Medium chain dehy 100.0 9.1E-33 2E-37 256.7 27.9 310 4-371 1-325 (325)
112 cd08247 AST1_like AST1 is a cy 100.0 1.5E-32 3.3E-37 258.4 29.4 318 4-371 1-352 (352)
113 cd08273 MDR8 Medium chain dehy 100.0 1.9E-32 4.2E-37 255.4 27.4 305 5-369 2-330 (331)
114 cd08272 MDR6 Medium chain dehy 100.0 3.4E-32 7.4E-37 252.7 28.1 311 4-371 1-326 (326)
115 cd08268 MDR2 Medium chain dehy 100.0 1.4E-31 3.1E-36 248.6 29.8 315 4-370 1-327 (328)
116 TIGR02824 quinone_pig3 putativ 100.0 2.3E-31 5E-36 246.9 30.5 311 4-371 1-325 (325)
117 cd08251 polyketide_synthase po 100.0 2.6E-31 5.6E-36 244.2 29.0 291 23-368 2-302 (303)
118 cd08241 QOR1 Quinone oxidoredu 100.0 8.3E-31 1.8E-35 242.8 29.2 309 4-370 1-323 (323)
119 cd05289 MDR_like_2 alcohol deh 100.0 2.7E-31 5.8E-36 244.7 25.6 300 4-368 1-308 (309)
120 cd08275 MDR3 Medium chain dehy 100.0 3.6E-30 7.8E-35 240.4 30.8 310 5-371 1-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 3.2E-30 6.8E-35 239.0 26.0 294 17-368 15-318 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 5.6E-30 1.2E-34 233.5 25.7 281 29-368 1-292 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 1.2E-29 2.7E-34 231.0 24.7 276 33-368 2-287 (288)
124 KOG1196 Predicted NAD-dependen 100.0 8.3E-28 1.8E-32 207.6 24.2 294 18-372 26-341 (343)
125 cd08255 2-desacetyl-2-hydroxye 100.0 1.2E-27 2.7E-32 217.5 24.4 251 50-369 14-277 (277)
126 KOG1202 Animal-type fatty acid 99.9 4.2E-27 9.1E-32 231.5 17.5 293 16-372 1429-1742(2376)
127 PF08240 ADH_N: Alcohol dehydr 99.9 1.2E-23 2.7E-28 163.3 8.2 108 28-157 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 1.1E-16 2.3E-21 128.5 12.9 128 199-334 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.1E-12 2.4E-17 123.3 15.7 175 177-372 189-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.3 2.7E-11 5.8E-16 116.9 15.3 155 185-344 161-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.1 1.2E-11 2.6E-16 98.6 1.9 119 232-369 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 1.2E-07 2.6E-12 85.9 8.9 167 183-363 72-252 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 1.2E-06 2.6E-11 84.8 12.7 127 186-315 161-312 (511)
134 PRK08306 dipicolinate synthase 98.3 1.2E-05 2.6E-10 73.5 14.1 99 188-298 151-249 (296)
135 PRK05476 S-adenosyl-L-homocyst 98.3 6.8E-06 1.5E-10 78.1 12.4 103 176-293 198-302 (425)
136 TIGR01035 hemA glutamyl-tRNA r 98.3 4.7E-08 1E-12 93.6 -3.0 160 60-271 89-253 (417)
137 TIGR00936 ahcY adenosylhomocys 98.2 2.2E-05 4.8E-10 74.2 12.3 101 178-293 183-285 (406)
138 PF11017 DUF2855: Protein of u 98.1 5.6E-05 1.2E-09 68.4 11.9 139 142-293 90-234 (314)
139 PLN02494 adenosylhomocysteinas 98.0 4.9E-05 1.1E-09 72.6 11.6 102 177-293 241-344 (477)
140 PRK00517 prmA ribosomal protei 98.0 0.00011 2.3E-09 65.7 12.7 131 142-292 78-215 (250)
141 cd05213 NAD_bind_Glutamyl_tRNA 98.0 2.4E-05 5.1E-10 72.2 8.4 108 152-271 139-251 (311)
142 COG2518 Pcm Protein-L-isoaspar 97.9 9.8E-05 2.1E-09 62.7 9.0 99 180-289 64-168 (209)
143 PRK12771 putative glutamate sy 97.9 1.3E-05 2.8E-10 80.3 4.4 98 185-289 133-252 (564)
144 TIGR02853 spore_dpaA dipicolin 97.8 0.00023 5E-09 64.7 11.9 99 188-298 150-248 (287)
145 TIGR00518 alaDH alanine dehydr 97.8 0.00018 3.8E-09 68.0 11.2 99 188-294 166-271 (370)
146 PTZ00075 Adenosylhomocysteinas 97.8 0.00025 5.4E-09 68.0 11.6 101 178-293 242-344 (476)
147 PRK08324 short chain dehydroge 97.7 0.0003 6.4E-09 72.2 11.7 138 142-293 386-560 (681)
148 PF01488 Shikimate_DH: Shikima 97.6 0.00032 7E-09 56.2 7.8 73 188-269 11-86 (135)
149 PRK00045 hemA glutamyl-tRNA re 97.5 0.00019 4.2E-09 69.1 6.9 160 60-270 91-254 (423)
150 TIGR00406 prmA ribosomal prote 97.5 0.0004 8.8E-09 63.3 8.3 97 186-292 157-261 (288)
151 COG2242 CobL Precorrin-6B meth 97.4 0.0017 3.7E-08 54.1 9.9 104 182-292 28-137 (187)
152 PRK00377 cbiT cobalt-precorrin 97.3 0.0027 5.9E-08 54.5 11.1 102 182-289 34-144 (198)
153 PRK13943 protein-L-isoaspartat 97.3 0.0019 4.1E-08 59.6 10.3 102 181-289 73-179 (322)
154 PRK05693 short chain dehydroge 97.3 0.0035 7.7E-08 56.6 12.1 77 190-268 2-82 (274)
155 COG4221 Short-chain alcohol de 97.3 0.0017 3.7E-08 56.4 9.2 79 188-268 5-91 (246)
156 PRK06182 short chain dehydroge 97.3 0.004 8.7E-08 56.2 11.8 79 188-268 2-84 (273)
157 PRK11705 cyclopropane fatty ac 97.2 0.0021 4.4E-08 61.1 9.9 108 174-291 153-268 (383)
158 KOG1209 1-Acyl dihydroxyaceton 97.2 0.0038 8.3E-08 52.8 10.2 81 187-268 5-91 (289)
159 PRK05786 fabG 3-ketoacyl-(acyl 97.2 0.0074 1.6E-07 53.1 12.7 103 188-293 4-138 (238)
160 PRK05993 short chain dehydroge 97.1 0.0039 8.5E-08 56.5 10.1 78 188-267 3-85 (277)
161 COG3967 DltE Short-chain dehyd 97.1 0.0034 7.4E-08 52.8 8.4 79 188-268 4-88 (245)
162 PF02353 CMAS: Mycolic acid cy 97.1 0.0018 3.9E-08 58.4 7.1 100 180-291 54-167 (273)
163 PF00670 AdoHcyase_NAD: S-aden 97.0 0.011 2.4E-07 48.4 10.8 92 186-292 20-112 (162)
164 PF01135 PCMT: Protein-L-isoas 97.0 0.0015 3.1E-08 56.5 5.8 102 180-289 64-171 (209)
165 PRK12742 oxidoreductase; Provi 97.0 0.016 3.5E-07 50.9 12.7 101 188-293 5-134 (237)
166 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0063 1.4E-07 51.3 9.5 90 187-291 34-128 (178)
167 PF12847 Methyltransf_18: Meth 97.0 0.0025 5.5E-08 48.9 6.6 94 188-289 1-110 (112)
168 PF13460 NAD_binding_10: NADH( 97.0 0.0097 2.1E-07 50.1 10.7 94 192-293 1-100 (183)
169 COG1748 LYS9 Saccharopine dehy 96.9 0.011 2.3E-07 55.7 11.3 95 190-291 2-100 (389)
170 COG2230 Cfa Cyclopropane fatty 96.9 0.016 3.4E-07 52.0 11.8 108 176-295 60-181 (283)
171 PRK13942 protein-L-isoaspartat 96.9 0.0086 1.9E-07 52.0 10.0 101 180-289 68-175 (212)
172 PLN03209 translocon at the inn 96.9 0.018 3.9E-07 56.9 12.9 106 181-293 72-210 (576)
173 TIGR00438 rrmJ cell division p 96.9 0.014 3.1E-07 49.5 11.0 100 183-290 27-146 (188)
174 PF01262 AlaDh_PNT_C: Alanine 96.9 0.0034 7.3E-08 52.4 6.9 102 188-292 19-141 (168)
175 PRK07326 short chain dehydroge 96.9 0.018 3.9E-07 50.6 12.1 79 188-268 5-92 (237)
176 TIGR02469 CbiT precorrin-6Y C5 96.9 0.012 2.6E-07 45.9 9.8 100 182-289 13-121 (124)
177 PRK14967 putative methyltransf 96.8 0.06 1.3E-06 47.1 14.9 97 183-289 31-158 (223)
178 COG0300 DltE Short-chain dehyd 96.8 0.0091 2E-07 53.2 9.3 79 187-268 4-94 (265)
179 PRK08017 oxidoreductase; Provi 96.8 0.0095 2.1E-07 53.0 9.8 78 190-268 3-84 (256)
180 PRK12828 short chain dehydroge 96.8 0.023 5E-07 49.8 12.0 79 188-268 6-92 (239)
181 COG3288 PntA NAD/NADP transhyd 96.8 0.014 3.1E-07 52.1 10.1 131 183-315 158-308 (356)
182 PRK07060 short chain dehydroge 96.8 0.013 2.8E-07 51.8 10.2 77 188-268 8-87 (245)
183 KOG1205 Predicted dehydrogenas 96.8 0.011 2.5E-07 53.0 9.6 110 188-299 11-158 (282)
184 PRK13944 protein-L-isoaspartat 96.7 0.011 2.4E-07 51.0 9.2 101 180-289 64-172 (205)
185 PRK06139 short chain dehydroge 96.7 0.0088 1.9E-07 55.7 9.1 79 188-268 6-94 (330)
186 PRK08177 short chain dehydroge 96.7 0.011 2.4E-07 51.7 9.3 77 190-268 2-81 (225)
187 PRK13940 glutamyl-tRNA reducta 96.7 0.012 2.5E-07 56.4 9.8 76 187-271 179-255 (414)
188 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.025 5.4E-07 55.1 12.3 79 188-268 209-294 (450)
189 TIGR01470 cysG_Nterm siroheme 96.7 0.071 1.5E-06 46.0 13.6 116 188-314 8-124 (205)
190 PRK00536 speE spermidine synth 96.7 0.0072 1.6E-07 53.9 7.6 101 187-291 71-172 (262)
191 PRK08628 short chain dehydroge 96.7 0.028 6.1E-07 50.1 11.7 79 188-268 6-93 (258)
192 cd01080 NAD_bind_m-THF_DH_Cycl 96.7 0.017 3.6E-07 48.1 9.3 96 168-293 23-119 (168)
193 PRK06718 precorrin-2 dehydroge 96.7 0.06 1.3E-06 46.3 13.1 115 188-314 9-124 (202)
194 PRK00107 gidB 16S rRNA methylt 96.6 0.022 4.8E-07 48.3 10.0 96 186-289 43-144 (187)
195 PRK08265 short chain dehydroge 96.6 0.036 7.8E-07 49.7 11.8 79 188-268 5-90 (261)
196 PRK06953 short chain dehydroge 96.6 0.018 3.8E-07 50.2 9.5 77 190-268 2-80 (222)
197 TIGR00080 pimt protein-L-isoas 96.5 0.02 4.4E-07 49.8 9.7 103 180-289 69-176 (215)
198 PRK06057 short chain dehydroge 96.5 0.017 3.7E-07 51.5 9.5 79 188-268 6-89 (255)
199 PRK07806 short chain dehydroge 96.5 0.043 9.4E-07 48.5 11.8 101 188-291 5-135 (248)
200 TIGR01809 Shik-DH-AROM shikima 96.5 0.012 2.6E-07 53.5 8.2 75 188-268 124-200 (282)
201 PRK12939 short chain dehydroge 96.5 0.041 8.9E-07 48.6 11.6 79 188-268 6-94 (250)
202 PRK07109 short chain dehydroge 96.5 0.039 8.5E-07 51.5 11.7 79 188-268 7-95 (334)
203 PRK06719 precorrin-2 dehydroge 96.5 0.061 1.3E-06 44.3 11.5 88 188-289 12-99 (157)
204 PRK06949 short chain dehydroge 96.5 0.019 4E-07 51.2 9.2 79 188-268 8-96 (258)
205 COG0169 AroE Shikimate 5-dehyd 96.5 0.0092 2E-07 53.8 7.0 45 187-231 124-168 (283)
206 TIGR02356 adenyl_thiF thiazole 96.5 0.031 6.7E-07 48.1 10.1 35 188-222 20-54 (202)
207 PRK08267 short chain dehydroge 96.4 0.065 1.4E-06 47.8 12.6 77 190-268 2-87 (260)
208 PRK04148 hypothetical protein; 96.4 0.019 4.2E-07 45.5 7.7 86 187-282 15-101 (134)
209 COG4122 Predicted O-methyltran 96.4 0.059 1.3E-06 46.6 11.3 108 182-293 53-169 (219)
210 COG0373 HemA Glutamyl-tRNA red 96.4 0.017 3.7E-07 54.6 8.7 84 188-281 177-264 (414)
211 PRK03369 murD UDP-N-acetylmura 96.4 0.025 5.4E-07 55.7 10.3 73 186-269 9-81 (488)
212 TIGR03325 BphB_TodD cis-2,3-di 96.4 0.021 4.5E-07 51.2 9.0 78 188-267 4-88 (262)
213 PRK14175 bifunctional 5,10-met 96.4 0.03 6.6E-07 50.5 9.7 95 168-293 137-233 (286)
214 cd01075 NAD_bind_Leu_Phe_Val_D 96.3 0.057 1.2E-06 46.4 11.0 82 187-281 26-108 (200)
215 PRK12549 shikimate 5-dehydroge 96.3 0.04 8.6E-07 50.1 10.6 43 188-230 126-168 (284)
216 PLN02366 spermidine synthase 96.3 0.044 9.6E-07 50.3 10.8 100 186-290 89-206 (308)
217 PF13241 NAD_binding_7: Putati 96.3 0.04 8.6E-07 41.8 8.9 91 188-295 6-96 (103)
218 PRK07814 short chain dehydroge 96.3 0.023 5E-07 51.0 8.9 79 188-268 9-97 (263)
219 cd05311 NAD_bind_2_malic_enz N 96.3 0.056 1.2E-06 47.4 11.0 91 187-289 23-127 (226)
220 PRK05872 short chain dehydroge 96.3 0.026 5.7E-07 51.6 9.4 79 188-268 8-95 (296)
221 PLN02780 ketoreductase/ oxidor 96.3 0.03 6.4E-07 52.0 9.8 80 188-268 52-142 (320)
222 PRK06200 2,3-dihydroxy-2,3-dih 96.3 0.026 5.7E-07 50.5 9.2 79 188-268 5-90 (263)
223 TIGR01318 gltD_gamma_fam gluta 96.3 0.024 5.1E-07 55.6 9.3 79 187-270 139-238 (467)
224 PRK12829 short chain dehydroge 96.2 0.022 4.8E-07 50.9 8.4 79 187-268 9-96 (264)
225 PRK00811 spermidine synthase; 96.2 0.035 7.6E-07 50.5 9.6 97 187-289 75-190 (283)
226 PRK06180 short chain dehydroge 96.2 0.029 6.4E-07 50.7 9.1 79 188-268 3-88 (277)
227 PRK12550 shikimate 5-dehydroge 96.2 0.031 6.7E-07 50.4 9.0 70 185-268 118-188 (272)
228 PRK07825 short chain dehydroge 96.2 0.036 7.8E-07 49.9 9.4 78 189-268 5-88 (273)
229 PF03435 Saccharop_dh: Sacchar 96.2 0.052 1.1E-06 51.8 10.9 90 192-288 1-96 (386)
230 PRK05867 short chain dehydroge 96.1 0.031 6.7E-07 49.7 8.8 78 188-268 8-96 (253)
231 PRK09291 short chain dehydroge 96.1 0.038 8.2E-07 49.2 9.4 73 189-267 2-82 (257)
232 PRK06841 short chain dehydroge 96.1 0.03 6.4E-07 49.8 8.6 78 188-268 14-99 (255)
233 PRK12809 putative oxidoreducta 96.1 0.029 6.2E-07 57.2 9.4 76 188-269 309-406 (639)
234 PRK07774 short chain dehydroge 96.1 0.037 8E-07 49.0 9.1 78 188-268 5-93 (250)
235 PRK07831 short chain dehydroge 96.1 0.042 9.2E-07 49.1 9.6 81 186-268 14-107 (262)
236 PRK07402 precorrin-6B methylas 96.1 0.11 2.5E-06 44.3 11.7 105 181-291 33-143 (196)
237 PRK12429 3-hydroxybutyrate deh 96.1 0.088 1.9E-06 46.7 11.5 79 188-268 3-91 (258)
238 PRK08339 short chain dehydroge 96.1 0.046 1E-06 49.1 9.5 79 188-268 7-95 (263)
239 PRK07024 short chain dehydroge 96.0 0.045 9.8E-07 48.8 9.3 78 189-268 2-88 (257)
240 PRK15116 sulfur acceptor prote 96.0 0.16 3.4E-06 45.6 12.5 103 188-292 29-155 (268)
241 PRK07832 short chain dehydroge 96.0 0.089 1.9E-06 47.4 11.2 76 190-268 1-88 (272)
242 PRK12475 thiamine/molybdopteri 96.0 0.083 1.8E-06 49.3 11.1 35 189-223 24-58 (338)
243 PRK11207 tellurite resistance 96.0 0.024 5.2E-07 48.6 7.1 97 183-290 25-134 (197)
244 PRK05866 short chain dehydroge 96.0 0.053 1.1E-06 49.6 9.7 79 188-268 39-127 (293)
245 PRK01581 speE spermidine synth 96.0 0.13 2.9E-06 47.9 12.1 99 186-290 148-268 (374)
246 PRK07502 cyclohexadienyl dehyd 96.0 0.057 1.2E-06 49.7 9.9 92 190-292 7-102 (307)
247 PRK08263 short chain dehydroge 96.0 0.11 2.5E-06 46.8 11.8 78 189-268 3-87 (275)
248 PRK05562 precorrin-2 dehydroge 96.0 0.32 7E-06 42.3 13.8 117 188-315 24-141 (223)
249 TIGR01832 kduD 2-deoxy-D-gluco 96.0 0.055 1.2E-06 47.9 9.5 79 188-268 4-90 (248)
250 PRK06128 oxidoreductase; Provi 96.0 0.12 2.6E-06 47.4 12.0 103 188-293 54-194 (300)
251 COG2519 GCD14 tRNA(1-methylade 96.0 0.091 2E-06 46.1 10.3 106 180-292 86-197 (256)
252 COG2264 PrmA Ribosomal protein 96.0 0.059 1.3E-06 48.8 9.5 100 186-293 160-266 (300)
253 COG0686 Ald Alanine dehydrogen 95.9 0.039 8.5E-07 49.6 8.1 99 188-293 167-271 (371)
254 PRK09072 short chain dehydroge 95.9 0.056 1.2E-06 48.4 9.6 78 188-268 4-90 (263)
255 PRK07231 fabG 3-ketoacyl-(acyl 95.9 0.046 1E-06 48.4 8.9 79 188-268 4-91 (251)
256 PRK06463 fabG 3-ketoacyl-(acyl 95.9 0.052 1.1E-06 48.4 9.2 79 188-268 6-89 (255)
257 PRK08703 short chain dehydroge 95.9 0.033 7.2E-07 49.0 7.9 80 188-268 5-97 (239)
258 PLN03075 nicotianamine synthas 95.9 0.064 1.4E-06 48.6 9.6 98 188-290 123-233 (296)
259 PRK08217 fabG 3-ketoacyl-(acyl 95.9 0.051 1.1E-06 48.1 9.1 78 188-267 4-91 (253)
260 PRK06483 dihydromonapterin red 95.9 0.067 1.4E-06 47.0 9.7 78 189-268 2-84 (236)
261 PRK06500 short chain dehydroge 95.9 0.054 1.2E-06 47.9 9.1 79 188-268 5-90 (249)
262 PRK06196 oxidoreductase; Provi 95.9 0.06 1.3E-06 49.8 9.6 79 188-268 25-109 (315)
263 PRK08618 ornithine cyclodeamin 95.9 0.1 2.2E-06 48.5 11.1 94 187-293 125-224 (325)
264 KOG1014 17 beta-hydroxysteroid 95.9 0.069 1.5E-06 48.1 9.4 79 187-268 47-136 (312)
265 PRK07062 short chain dehydroge 95.9 0.047 1E-06 48.9 8.7 79 188-268 7-97 (265)
266 PRK07890 short chain dehydroge 95.9 0.053 1.2E-06 48.2 9.0 79 188-268 4-92 (258)
267 PRK07478 short chain dehydroge 95.9 0.055 1.2E-06 48.2 9.0 79 188-268 5-93 (254)
268 PRK07454 short chain dehydroge 95.8 0.075 1.6E-06 46.8 9.8 79 188-268 5-93 (241)
269 PF00106 adh_short: short chai 95.8 0.068 1.5E-06 44.0 9.0 79 190-268 1-90 (167)
270 PRK07677 short chain dehydroge 95.8 0.055 1.2E-06 48.1 9.0 78 189-268 1-88 (252)
271 PF03446 NAD_binding_2: NAD bi 95.8 0.18 3.9E-06 41.7 11.4 90 190-293 2-97 (163)
272 cd01065 NAD_bind_Shikimate_DH 95.8 0.07 1.5E-06 43.5 9.0 95 187-291 17-117 (155)
273 PRK12769 putative oxidoreducta 95.8 0.04 8.7E-07 56.4 9.0 77 187-269 325-423 (654)
274 PRK06482 short chain dehydroge 95.8 0.057 1.2E-06 48.7 9.2 77 190-268 3-86 (276)
275 PLN02781 Probable caffeoyl-CoA 95.8 0.079 1.7E-06 46.7 9.7 106 182-291 62-179 (234)
276 PRK07574 formate dehydrogenase 95.8 0.05 1.1E-06 51.5 8.8 90 188-291 191-285 (385)
277 PRK06172 short chain dehydroge 95.8 0.057 1.2E-06 48.0 8.9 78 188-268 6-94 (253)
278 PRK06505 enoyl-(acyl carrier p 95.8 0.06 1.3E-06 48.6 9.2 79 188-268 6-95 (271)
279 PRK08589 short chain dehydroge 95.8 0.056 1.2E-06 48.7 8.9 79 188-268 5-92 (272)
280 PRK08261 fabG 3-ketoacyl-(acyl 95.8 0.027 5.8E-07 54.9 7.2 95 181-293 26-126 (450)
281 PRK07066 3-hydroxybutyryl-CoA 95.8 0.086 1.9E-06 48.7 10.1 39 190-229 8-46 (321)
282 PRK04457 spermidine synthase; 95.8 0.13 2.9E-06 46.1 11.1 97 187-289 65-176 (262)
283 COG2226 UbiE Methylase involve 95.8 0.14 3E-06 45.0 10.8 106 182-294 45-160 (238)
284 PRK13394 3-hydroxybutyrate deh 95.8 0.077 1.7E-06 47.3 9.6 78 188-268 6-94 (262)
285 PRK08264 short chain dehydroge 95.7 0.056 1.2E-06 47.5 8.6 75 188-268 5-83 (238)
286 PRK07533 enoyl-(acyl carrier p 95.7 0.079 1.7E-06 47.4 9.6 79 188-268 9-98 (258)
287 PRK05854 short chain dehydroge 95.7 0.071 1.5E-06 49.2 9.5 40 188-228 13-53 (313)
288 PRK07523 gluconate 5-dehydroge 95.7 0.066 1.4E-06 47.7 9.0 79 188-268 9-97 (255)
289 PRK05653 fabG 3-ketoacyl-(acyl 95.7 0.08 1.7E-06 46.5 9.5 78 189-268 5-92 (246)
290 PRK08862 short chain dehydroge 95.7 0.12 2.7E-06 45.2 10.6 79 188-267 4-92 (227)
291 COG0421 SpeE Spermidine syntha 95.7 0.14 3E-06 46.3 10.9 101 185-289 74-189 (282)
292 PRK08643 acetoin reductase; Va 95.7 0.065 1.4E-06 47.7 8.9 78 189-268 2-89 (256)
293 COG1179 Dinucleotide-utilizing 95.7 0.16 3.6E-06 44.1 10.6 102 188-292 29-155 (263)
294 cd00755 YgdL_like Family of ac 95.7 0.13 2.8E-06 45.1 10.4 34 189-222 11-44 (231)
295 CHL00194 ycf39 Ycf39; Provisio 95.7 0.073 1.6E-06 49.2 9.4 95 191-292 2-111 (317)
296 KOG0725 Reductases with broad 95.7 0.064 1.4E-06 48.4 8.7 80 188-268 7-99 (270)
297 PRK06484 short chain dehydroge 95.7 0.17 3.7E-06 50.2 12.6 104 187-293 267-403 (520)
298 TIGR00507 aroE shikimate 5-deh 95.7 0.08 1.7E-06 47.8 9.3 93 186-291 114-215 (270)
299 PRK14192 bifunctional 5,10-met 95.7 0.085 1.8E-06 47.8 9.4 77 186-292 156-233 (283)
300 PRK08644 thiamine biosynthesis 95.7 0.1 2.2E-06 45.2 9.6 35 188-222 27-61 (212)
301 PRK06138 short chain dehydroge 95.6 0.066 1.4E-06 47.4 8.7 79 188-268 4-91 (252)
302 PRK05884 short chain dehydroge 95.6 0.096 2.1E-06 45.7 9.5 74 191-267 2-78 (223)
303 PF02254 TrkA_N: TrkA-N domain 95.6 0.22 4.8E-06 38.4 10.6 92 192-289 1-95 (116)
304 PRK06194 hypothetical protein; 95.6 0.068 1.5E-06 48.5 8.9 79 188-268 5-93 (287)
305 PRK12937 short chain dehydroge 95.6 0.26 5.5E-06 43.4 12.3 101 188-292 4-141 (245)
306 PRK08213 gluconate 5-dehydroge 95.6 0.081 1.7E-06 47.2 9.2 78 188-268 11-99 (259)
307 PRK06079 enoyl-(acyl carrier p 95.6 0.078 1.7E-06 47.2 9.0 79 188-268 6-93 (252)
308 COG2910 Putative NADH-flavin r 95.6 0.04 8.6E-07 45.8 6.3 93 191-293 2-107 (211)
309 PRK07688 thiamine/molybdopteri 95.6 0.093 2E-06 49.0 9.7 34 189-222 24-57 (339)
310 PLN02253 xanthoxin dehydrogena 95.6 0.071 1.5E-06 48.2 8.8 78 188-268 17-104 (280)
311 cd01078 NAD_bind_H4MPT_DH NADP 95.6 0.12 2.5E-06 44.2 9.6 76 188-270 27-109 (194)
312 PRK07453 protochlorophyllide o 95.6 0.08 1.7E-06 49.1 9.3 78 188-267 5-92 (322)
313 PRK12548 shikimate 5-dehydroge 95.6 0.11 2.5E-06 47.3 10.1 36 188-223 125-160 (289)
314 PRK12823 benD 1,6-dihydroxycyc 95.6 0.067 1.4E-06 47.7 8.5 78 188-267 7-93 (260)
315 PRK06914 short chain dehydroge 95.6 0.08 1.7E-06 47.8 9.1 77 189-268 3-91 (280)
316 PRK06198 short chain dehydroge 95.6 0.09 2E-06 46.9 9.3 80 188-268 5-94 (260)
317 PRK06179 short chain dehydroge 95.6 0.034 7.3E-07 50.0 6.6 76 189-268 4-83 (270)
318 PF00899 ThiF: ThiF family; I 95.6 0.1 2.2E-06 41.7 8.6 34 189-222 2-35 (135)
319 PRK05717 oxidoreductase; Valid 95.6 0.084 1.8E-06 47.0 9.1 79 188-268 9-94 (255)
320 TIGR03840 TMPT_Se_Te thiopurin 95.6 0.17 3.7E-06 43.9 10.6 102 187-292 33-154 (213)
321 PRK07063 short chain dehydroge 95.6 0.078 1.7E-06 47.3 8.9 79 188-268 6-96 (260)
322 PRK07035 short chain dehydroge 95.6 0.082 1.8E-06 46.9 9.0 78 188-267 7-94 (252)
323 PRK08226 short chain dehydroge 95.6 0.083 1.8E-06 47.2 9.1 79 188-268 5-92 (263)
324 TIGR02355 moeB molybdopterin s 95.6 0.12 2.5E-06 45.8 9.7 35 189-223 24-58 (240)
325 PRK07074 short chain dehydroge 95.5 0.093 2E-06 46.7 9.3 78 189-268 2-87 (257)
326 cd01483 E1_enzyme_family Super 95.5 0.16 3.4E-06 41.0 9.8 32 191-222 1-32 (143)
327 PRK06181 short chain dehydroge 95.5 0.084 1.8E-06 47.2 9.0 78 189-268 1-88 (263)
328 PRK08219 short chain dehydroge 95.5 0.16 3.5E-06 44.1 10.6 74 190-268 4-81 (227)
329 PRK07856 short chain dehydroge 95.5 0.065 1.4E-06 47.6 8.1 77 188-268 5-85 (252)
330 PLN03139 formate dehydrogenase 95.5 0.065 1.4E-06 50.8 8.4 90 188-291 198-292 (386)
331 PRK06125 short chain dehydroge 95.5 0.15 3.2E-06 45.5 10.5 77 188-268 6-91 (259)
332 PRK07576 short chain dehydroge 95.5 0.1 2.2E-06 46.8 9.4 78 188-267 8-95 (264)
333 PRK07067 sorbitol dehydrogenas 95.5 0.094 2E-06 46.7 9.1 78 189-268 6-90 (257)
334 PF01408 GFO_IDH_MocA: Oxidore 95.5 0.45 9.8E-06 36.8 12.0 87 191-289 2-91 (120)
335 PRK12367 short chain dehydroge 95.5 0.11 2.5E-06 46.0 9.5 73 188-268 13-89 (245)
336 PLN02476 O-methyltransferase 95.5 0.15 3.2E-06 46.0 10.2 107 182-292 112-230 (278)
337 PF06325 PrmA: Ribosomal prote 95.5 0.041 8.8E-07 50.1 6.6 96 186-293 159-262 (295)
338 PRK08594 enoyl-(acyl carrier p 95.5 0.24 5.2E-06 44.3 11.6 78 188-267 6-96 (257)
339 PRK06114 short chain dehydroge 95.4 0.1 2.2E-06 46.5 9.2 79 188-268 7-96 (254)
340 PRK05875 short chain dehydroge 95.4 0.097 2.1E-06 47.2 9.1 78 188-267 6-95 (276)
341 PRK08317 hypothetical protein; 95.4 0.083 1.8E-06 46.3 8.5 102 181-291 12-125 (241)
342 PRK05876 short chain dehydroge 95.4 0.09 2E-06 47.5 8.9 79 188-268 5-93 (275)
343 PRK09242 tropinone reductase; 95.4 0.1 2.2E-06 46.5 9.0 79 188-268 8-98 (257)
344 PRK07985 oxidoreductase; Provi 95.4 0.23 4.9E-06 45.4 11.4 103 188-293 48-188 (294)
345 TIGR00477 tehB tellurite resis 95.4 0.068 1.5E-06 45.7 7.4 98 182-290 24-133 (195)
346 PRK06197 short chain dehydroge 95.4 0.1 2.3E-06 47.9 9.2 39 188-227 15-54 (306)
347 PRK05690 molybdopterin biosynt 95.4 0.13 2.7E-06 45.8 9.3 35 188-222 31-65 (245)
348 PRK06124 gluconate 5-dehydroge 95.3 0.13 2.7E-06 45.8 9.4 79 188-268 10-98 (256)
349 PF02558 ApbA: Ketopantoate re 95.3 0.013 2.8E-07 47.8 2.7 94 192-291 1-102 (151)
350 PRK06398 aldose dehydrogenase; 95.3 0.059 1.3E-06 48.2 7.2 74 188-268 5-82 (258)
351 PRK14194 bifunctional 5,10-met 95.3 0.11 2.5E-06 47.1 8.9 95 168-293 138-234 (301)
352 PRK12481 2-deoxy-D-gluconate 3 95.3 0.13 2.9E-06 45.7 9.5 79 188-268 7-93 (251)
353 PRK07904 short chain dehydroge 95.3 0.16 3.5E-06 45.3 10.0 81 186-268 5-97 (253)
354 PRK08287 cobalt-precorrin-6Y C 95.3 0.27 5.8E-06 41.6 10.9 99 182-289 25-130 (187)
355 PRK08251 short chain dehydroge 95.3 0.12 2.6E-06 45.7 9.2 77 189-267 2-90 (248)
356 PRK08277 D-mannonate oxidoredu 95.3 0.11 2.4E-06 46.9 9.0 78 188-267 9-96 (278)
357 PRK08085 gluconate 5-dehydroge 95.3 0.13 2.8E-06 45.7 9.3 79 188-268 8-96 (254)
358 PRK00312 pcm protein-L-isoaspa 95.3 0.21 4.5E-06 43.3 10.3 100 181-289 71-174 (212)
359 COG2227 UbiG 2-polyprenyl-3-me 95.3 0.16 3.5E-06 44.2 9.3 95 187-289 58-160 (243)
360 cd00757 ThiF_MoeB_HesA_family 95.3 0.23 4.9E-06 43.6 10.6 34 189-222 21-54 (228)
361 TIGR02354 thiF_fam2 thiamine b 95.3 0.18 4E-06 43.2 9.7 35 188-222 20-54 (200)
362 PRK09186 flagellin modificatio 95.3 0.12 2.5E-06 46.0 8.9 78 188-267 3-92 (256)
363 PRK12826 3-ketoacyl-(acyl-carr 95.2 0.13 2.9E-06 45.3 9.3 79 188-268 5-93 (251)
364 PRK06603 enoyl-(acyl carrier p 95.2 0.13 2.8E-06 46.1 9.1 78 188-267 7-95 (260)
365 PRK10538 malonic semialdehyde 95.2 0.12 2.7E-06 45.7 9.0 76 191-268 2-84 (248)
366 PRK12936 3-ketoacyl-(acyl-carr 95.2 0.13 2.9E-06 45.2 9.1 79 188-268 5-90 (245)
367 PRK12384 sorbitol-6-phosphate 95.2 0.16 3.4E-06 45.3 9.7 39 189-228 2-41 (259)
368 PRK14188 bifunctional 5,10-met 95.2 0.14 3.1E-06 46.5 9.3 94 168-293 137-233 (296)
369 PRK06101 short chain dehydroge 95.2 0.18 3.8E-06 44.5 9.8 42 190-232 2-44 (240)
370 TIGR00417 speE spermidine synt 95.2 0.28 6.1E-06 44.3 11.2 97 187-289 71-185 (270)
371 PRK08340 glucose-1-dehydrogena 95.2 0.13 2.7E-06 46.0 9.0 76 191-268 2-86 (259)
372 TIGR03215 ac_ald_DH_ac acetald 95.2 0.32 6.9E-06 44.1 11.3 90 191-291 3-95 (285)
373 COG0569 TrkA K+ transport syst 95.2 0.2 4.3E-06 43.9 9.9 73 191-268 2-76 (225)
374 PRK07577 short chain dehydroge 95.2 0.093 2E-06 45.9 7.9 74 188-268 2-78 (234)
375 PRK08415 enoyl-(acyl carrier p 95.2 0.15 3.3E-06 46.1 9.4 103 188-293 4-146 (274)
376 PRK08328 hypothetical protein; 95.2 0.12 2.7E-06 45.4 8.6 34 189-222 27-60 (231)
377 PRK07666 fabG 3-ketoacyl-(acyl 95.1 0.13 2.9E-06 45.1 8.9 80 188-268 6-94 (239)
378 PRK06935 2-deoxy-D-gluconate 3 95.1 0.13 2.8E-06 45.9 8.8 79 188-268 14-101 (258)
379 cd01487 E1_ThiF_like E1_ThiF_l 95.1 0.16 3.4E-06 42.6 8.7 33 191-223 1-33 (174)
380 TIGR03206 benzo_BadH 2-hydroxy 95.1 0.17 3.6E-06 44.8 9.4 79 188-267 2-89 (250)
381 PRK05597 molybdopterin biosynt 95.1 0.22 4.7E-06 46.9 10.5 36 188-223 27-62 (355)
382 PRK06077 fabG 3-ketoacyl-(acyl 95.1 0.5 1.1E-05 41.7 12.5 102 189-293 6-143 (252)
383 PRK08762 molybdopterin biosynt 95.1 0.13 2.9E-06 48.8 9.1 35 188-222 134-168 (376)
384 cd01492 Aos1_SUMO Ubiquitin ac 95.1 0.21 4.6E-06 42.8 9.5 34 189-222 21-54 (197)
385 TIGR01963 PHB_DH 3-hydroxybuty 95.1 0.13 2.9E-06 45.5 8.7 78 189-268 1-88 (255)
386 PF02670 DXP_reductoisom: 1-de 95.1 0.23 5E-06 39.1 8.9 93 192-286 1-117 (129)
387 PRK08220 2,3-dihydroxybenzoate 95.0 0.29 6.4E-06 43.2 10.8 74 188-268 7-86 (252)
388 PRK14103 trans-aconitate 2-met 95.0 0.35 7.5E-06 43.2 11.2 96 181-289 22-125 (255)
389 PRK07102 short chain dehydroge 95.0 0.22 4.7E-06 43.9 9.8 38 190-228 2-40 (243)
390 PLN00203 glutamyl-tRNA reducta 95.0 0.13 2.8E-06 50.8 8.8 82 189-279 266-352 (519)
391 COG2084 MmsB 3-hydroxyisobutyr 95.0 0.19 4.2E-06 45.3 9.2 89 191-293 2-98 (286)
392 PRK10792 bifunctional 5,10-met 94.9 0.16 3.5E-06 45.8 8.7 94 169-293 139-234 (285)
393 PRK08993 2-deoxy-D-gluconate 3 94.9 0.18 3.9E-06 44.9 9.2 79 188-268 9-95 (253)
394 PF03807 F420_oxidored: NADP o 94.9 0.98 2.1E-05 33.3 11.9 84 191-288 1-92 (96)
395 PRK10669 putative cation:proto 94.9 0.22 4.7E-06 50.1 10.6 75 190-269 418-492 (558)
396 PRK07097 gluconate 5-dehydroge 94.9 0.18 3.9E-06 45.2 9.2 78 188-268 9-97 (265)
397 PRK08690 enoyl-(acyl carrier p 94.9 0.18 4E-06 45.1 9.2 79 188-268 5-94 (261)
398 PRK00121 trmB tRNA (guanine-N( 94.9 0.49 1.1E-05 40.6 11.4 97 188-289 40-155 (202)
399 PRK07340 ornithine cyclodeamin 94.9 0.13 2.9E-06 47.2 8.3 93 187-293 123-220 (304)
400 TIGR00138 gidB 16S rRNA methyl 94.9 0.19 4.2E-06 42.4 8.7 93 189-289 43-141 (181)
401 PRK08303 short chain dehydroge 94.9 0.25 5.5E-06 45.4 10.2 34 188-222 7-41 (305)
402 PF01564 Spermine_synth: Sperm 94.9 0.066 1.4E-06 47.6 6.1 96 188-290 76-191 (246)
403 PRK06720 hypothetical protein; 94.9 0.28 6E-06 40.9 9.5 39 188-227 15-54 (169)
404 PRK01683 trans-aconitate 2-met 94.9 0.33 7.2E-06 43.4 10.7 100 181-290 24-130 (258)
405 PRK06113 7-alpha-hydroxysteroi 94.8 0.18 4E-06 44.8 9.0 79 188-268 10-98 (255)
406 PF01596 Methyltransf_3: O-met 94.8 0.074 1.6E-06 45.8 6.0 104 184-292 41-157 (205)
407 PRK08300 acetaldehyde dehydrog 94.8 0.38 8.3E-06 43.8 10.8 94 190-291 5-101 (302)
408 PRK03562 glutathione-regulated 94.8 0.21 4.6E-06 50.7 10.2 93 189-287 400-495 (621)
409 PLN02657 3,8-divinyl protochlo 94.8 0.26 5.7E-06 47.0 10.4 82 184-268 55-146 (390)
410 PRK11036 putative S-adenosyl-L 94.8 0.3 6.5E-06 43.6 10.2 97 187-290 43-149 (255)
411 PLN02823 spermine synthase 94.8 0.32 7E-06 45.2 10.6 99 188-289 103-219 (336)
412 PRK13243 glyoxylate reductase; 94.8 0.23 5E-06 46.3 9.7 88 188-291 149-241 (333)
413 PRK08159 enoyl-(acyl carrier p 94.8 0.21 4.5E-06 45.1 9.2 78 188-267 9-97 (272)
414 TIGR02622 CDP_4_6_dhtase CDP-g 94.8 0.082 1.8E-06 49.6 6.8 75 188-268 3-85 (349)
415 PLN02244 tocopherol O-methyltr 94.8 0.19 4.2E-06 47.0 9.2 95 187-291 117-224 (340)
416 COG1052 LdhA Lactate dehydroge 94.8 0.82 1.8E-05 42.3 13.1 90 187-292 144-238 (324)
417 PTZ00098 phosphoethanolamine N 94.7 0.33 7.2E-06 43.6 10.4 106 180-292 44-158 (263)
418 PRK14027 quinate/shikimate deh 94.7 0.12 2.6E-06 46.9 7.5 44 187-230 125-168 (283)
419 PRK14191 bifunctional 5,10-met 94.7 0.26 5.6E-06 44.5 9.4 94 169-293 137-232 (285)
420 TIGR02632 RhaD_aldol-ADH rhamn 94.7 0.19 4E-06 51.7 9.7 113 143-268 379-503 (676)
421 PRK07424 bifunctional sterol d 94.7 0.22 4.8E-06 47.6 9.5 74 188-268 177-255 (406)
422 PF08704 GCD14: tRNA methyltra 94.7 0.084 1.8E-06 46.7 6.2 109 180-292 32-148 (247)
423 PF01210 NAD_Gly3P_dh_N: NAD-d 94.7 0.33 7.3E-06 39.8 9.4 84 191-281 1-91 (157)
424 PRK07417 arogenate dehydrogena 94.7 0.25 5.5E-06 44.8 9.5 67 191-269 2-68 (279)
425 TIGR01505 tartro_sem_red 2-hyd 94.7 0.2 4.4E-06 45.7 9.0 70 191-273 1-70 (291)
426 PRK08278 short chain dehydroge 94.7 0.2 4.3E-06 45.2 8.8 36 188-224 5-41 (273)
427 PRK11559 garR tartronate semia 94.6 0.25 5.5E-06 45.2 9.5 71 190-273 3-73 (296)
428 PLN00141 Tic62-NAD(P)-related 94.6 0.26 5.6E-06 43.8 9.4 104 184-292 12-133 (251)
429 PRK05650 short chain dehydroge 94.6 0.23 5E-06 44.6 9.2 77 190-268 1-87 (270)
430 PRK10258 biotin biosynthesis p 94.6 0.84 1.8E-05 40.6 12.7 97 185-292 39-142 (251)
431 KOG1201 Hydroxysteroid 17-beta 94.6 0.25 5.5E-06 44.4 9.0 80 187-268 36-124 (300)
432 PLN02256 arogenate dehydrogena 94.6 0.31 6.6E-06 44.8 9.9 93 184-291 31-128 (304)
433 PRK01438 murD UDP-N-acetylmura 94.6 0.3 6.5E-06 48.0 10.5 70 188-269 15-89 (480)
434 PRK15469 ghrA bifunctional gly 94.6 0.22 4.7E-06 46.0 8.9 89 188-292 135-228 (312)
435 PF10727 Rossmann-like: Rossma 94.6 0.11 2.4E-06 40.9 6.0 79 189-281 10-90 (127)
436 PRK07819 3-hydroxybutyryl-CoA 94.6 0.37 7.9E-06 43.9 10.3 38 190-228 6-43 (286)
437 COG0673 MviM Predicted dehydro 94.6 0.96 2.1E-05 42.1 13.5 134 190-337 4-145 (342)
438 PLN02589 caffeoyl-CoA O-methyl 94.6 0.38 8.3E-06 42.6 10.0 106 182-291 73-191 (247)
439 PRK00258 aroE shikimate 5-dehy 94.5 0.11 2.4E-06 47.2 6.8 94 187-289 121-220 (278)
440 PRK05447 1-deoxy-D-xylulose 5- 94.5 0.49 1.1E-05 44.5 11.1 97 190-288 2-120 (385)
441 PLN02233 ubiquinone biosynthes 94.5 0.47 1E-05 42.6 10.8 102 183-293 68-185 (261)
442 PRK06523 short chain dehydroge 94.5 0.16 3.5E-06 45.2 7.8 75 188-267 8-86 (260)
443 PRK07984 enoyl-(acyl carrier p 94.5 0.29 6.2E-06 43.9 9.4 78 188-267 5-93 (262)
444 PRK08063 enoyl-(acyl carrier p 94.5 0.24 5.1E-06 43.8 8.7 80 188-268 3-92 (250)
445 PF05368 NmrA: NmrA-like famil 94.4 0.33 7.3E-06 42.5 9.6 71 192-268 1-74 (233)
446 KOG1610 Corticosteroid 11-beta 94.4 0.82 1.8E-05 41.5 11.8 109 186-295 26-169 (322)
447 PRK14618 NAD(P)H-dependent gly 94.4 0.48 1E-05 44.1 11.0 98 190-291 5-105 (328)
448 COG1712 Predicted dinucleotide 94.4 0.35 7.6E-06 41.6 8.9 80 191-282 2-84 (255)
449 PRK06484 short chain dehydroge 94.4 0.21 4.6E-06 49.6 9.1 79 188-268 4-89 (520)
450 PRK05600 thiamine biosynthesis 94.4 0.33 7.3E-06 45.9 9.8 35 188-222 40-74 (370)
451 TIGR02415 23BDH acetoin reduct 94.4 0.24 5.3E-06 43.8 8.6 77 190-268 1-87 (254)
452 PLN02520 bifunctional 3-dehydr 94.3 0.21 4.7E-06 49.6 8.8 71 188-268 378-449 (529)
453 PRK12743 oxidoreductase; Provi 94.3 0.27 5.9E-06 43.7 8.9 78 189-268 2-90 (256)
454 PRK07791 short chain dehydroge 94.3 0.31 6.8E-06 44.3 9.4 35 188-223 5-40 (286)
455 PRK06171 sorbitol-6-phosphate 94.3 0.15 3.2E-06 45.7 7.1 76 188-268 8-87 (266)
456 PRK03659 glutathione-regulated 94.3 0.35 7.5E-06 49.0 10.4 93 190-288 401-496 (601)
457 PRK05565 fabG 3-ketoacyl-(acyl 94.3 0.27 5.9E-06 43.2 8.7 78 189-268 5-93 (247)
458 PRK14189 bifunctional 5,10-met 94.3 0.28 6E-06 44.3 8.6 94 169-293 138-233 (285)
459 TIGR00563 rsmB ribosomal RNA s 94.3 0.42 9E-06 46.3 10.5 103 182-291 232-369 (426)
460 PRK12938 acetyacetyl-CoA reduc 94.3 0.35 7.6E-06 42.6 9.4 79 188-268 2-91 (246)
461 PRK08223 hypothetical protein; 94.3 0.48 1E-05 42.9 10.1 35 188-222 26-60 (287)
462 TIGR00872 gnd_rel 6-phosphoglu 94.3 0.39 8.5E-06 44.0 9.9 44 191-235 2-45 (298)
463 PRK07792 fabG 3-ketoacyl-(acyl 94.2 0.37 8E-06 44.3 9.7 78 188-268 11-99 (306)
464 PRK03612 spermidine synthase; 94.2 0.39 8.5E-06 47.7 10.4 98 187-290 296-415 (521)
465 PRK05557 fabG 3-ketoacyl-(acyl 94.2 0.37 8E-06 42.3 9.4 79 188-268 4-93 (248)
466 PLN02928 oxidoreductase family 94.2 0.32 7E-06 45.6 9.2 96 188-291 158-263 (347)
467 PRK09599 6-phosphogluconate de 94.2 0.32 6.9E-06 44.7 9.1 44 191-235 2-45 (301)
468 PRK13255 thiopurine S-methyltr 94.2 0.58 1.2E-05 40.8 10.2 101 185-289 34-154 (218)
469 PRK06940 short chain dehydroge 94.2 0.38 8.2E-06 43.5 9.5 77 189-268 2-86 (275)
470 PLN02986 cinnamyl-alcohol dehy 94.1 0.31 6.6E-06 45.1 9.0 37 188-225 4-41 (322)
471 cd05191 NAD_bind_amino_acid_DH 94.1 0.46 1E-05 34.5 8.2 35 187-221 21-55 (86)
472 COG1648 CysG Siroheme synthase 94.1 1.4 3E-05 38.1 12.3 117 188-315 11-128 (210)
473 PRK12747 short chain dehydroge 94.1 0.97 2.1E-05 40.0 11.9 104 188-293 3-147 (252)
474 PRK09135 pteridine reductase; 94.1 0.37 8E-06 42.4 9.2 34 188-222 5-39 (249)
475 KOG1207 Diacetyl reductase/L-x 94.1 0.21 4.5E-06 41.1 6.7 44 188-232 6-50 (245)
476 PRK13303 L-aspartate dehydroge 94.1 0.3 6.5E-06 43.9 8.5 86 191-288 3-90 (265)
477 PRK07775 short chain dehydroge 94.1 0.54 1.2E-05 42.3 10.3 79 188-268 9-97 (274)
478 PRK04266 fibrillarin; Provisio 94.1 0.9 1.9E-05 39.8 11.2 101 182-289 66-175 (226)
479 PRK07370 enoyl-(acyl carrier p 94.0 0.38 8.3E-06 42.9 9.2 103 188-293 5-150 (258)
480 PRK12749 quinate/shikimate deh 94.0 0.18 4E-06 45.9 7.1 36 188-223 123-158 (288)
481 cd01485 E1-1_like Ubiquitin ac 94.0 0.69 1.5E-05 39.6 10.2 34 189-222 19-52 (198)
482 PRK10637 cysG siroheme synthas 94.0 1.5 3.3E-05 42.8 13.8 117 188-315 11-128 (457)
483 PRK06522 2-dehydropantoate 2-r 94.0 0.3 6.5E-06 44.7 8.5 83 191-280 2-87 (304)
484 PF02719 Polysacc_synt_2: Poly 93.9 0.47 1E-05 43.0 9.4 77 192-268 1-87 (293)
485 PRK12480 D-lactate dehydrogena 93.9 0.6 1.3E-05 43.5 10.4 86 188-291 145-235 (330)
486 PRK12825 fabG 3-ketoacyl-(acyl 93.9 0.39 8.4E-06 42.1 9.0 77 189-267 6-93 (249)
487 COG0031 CysK Cysteine synthase 93.9 2.1 4.5E-05 39.0 13.3 61 181-241 54-116 (300)
488 COG1893 ApbA Ketopantoate redu 93.9 0.26 5.7E-06 45.3 7.9 88 191-281 2-89 (307)
489 PRK12779 putative bifunctional 93.9 0.21 4.5E-06 53.2 8.1 78 187-268 304-402 (944)
490 PRK08642 fabG 3-ketoacyl-(acyl 93.9 0.47 1E-05 41.9 9.4 77 189-267 5-90 (253)
491 TIGR01829 AcAcCoA_reduct aceto 93.8 0.4 8.7E-06 42.0 8.9 77 190-268 1-88 (242)
492 PF02882 THF_DHG_CYH_C: Tetrah 93.8 0.27 5.9E-06 40.4 7.1 94 169-293 16-111 (160)
493 TIGR00446 nop2p NOL1/NOP2/sun 93.8 1.2 2.7E-05 40.0 12.0 101 184-291 67-200 (264)
494 PRK06701 short chain dehydroge 93.8 0.48 1E-05 43.2 9.6 79 188-268 45-134 (290)
495 PRK07878 molybdopterin biosynt 93.8 0.69 1.5E-05 44.2 10.8 35 188-222 41-75 (392)
496 PF07991 IlvN: Acetohydroxy ac 93.8 1.2 2.5E-05 36.6 10.4 87 188-290 3-94 (165)
497 PRK12490 6-phosphogluconate de 93.8 0.38 8.3E-06 44.1 8.8 43 191-234 2-44 (299)
498 PRK06849 hypothetical protein; 93.7 0.61 1.3E-05 44.5 10.5 93 188-282 3-100 (389)
499 PRK13984 putative oxidoreducta 93.7 0.37 8.1E-06 48.9 9.5 77 186-268 280-378 (604)
500 PRK07411 hypothetical protein; 93.7 0.45 9.6E-06 45.4 9.4 34 189-222 38-71 (390)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=1.3e-66 Score=457.14 Aligned_cols=366 Identities=48% Similarity=0.862 Sum_probs=350.3
Q ss_pred cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336 2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
+++||.+.+++++||+++++++++|++|||+||+.++|+|++|.+.++|..|.. +|.++|||++|+|++||++|+++++
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 378999999999999999999999999999999999999999999999988877 9999999999999999999999999
Q ss_pred CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
||+|+..+...|++|.+|.+|..|+|...+-.+..|.+ +||.++++.+|...+++.|+++|+||..+++.++++++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 99999999999999999999999999999999888965 89999999999999999999999999999999999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~ 241 (373)
+++.++.+.|...|.+.+..+.+++++|++|.|+|.|++|++++|-|+..|++++++++.+++|++++++||+++++|..
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCC
Q 017336 242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 321 (373)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 321 (373)
+.. +..+.+.+++++++|++|||+|+.+.+.+++++..+ ||+.+++|.......++++++.+....+|+|+.++....
T Consensus 239 ~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p 316 (366)
T COG1062 239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP 316 (366)
T ss_pred hhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence 663 489999999999999999999999999999999999 699999999987888888888888779999999999998
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
+.++..++++..+|++++.++++++++|+|+|+||+.|.+++..|-|+.+
T Consensus 317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 99999999999999999999999999999999999999999999988864
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=2.1e-65 Score=459.90 Aligned_cols=335 Identities=35% Similarity=0.541 Sum_probs=301.0
Q ss_pred CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336 1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|++|||+++.++++|+++.+++.|+|+++||+|+|+|||+|++|++.++|.++...+|+|+|||++|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 67999999999999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred CCCEEee-cCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336 81 VGDHVLP-VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 81 ~Gd~V~~-~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
+||||.+ ....+|+.|.+|++|++++|++.... |++ .+|+|+||+++|+++++++|+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~---gy~-------------------~~GGyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT---GYT-------------------TDGGYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCcccc---cee-------------------ecCcceeEEEEchHHeEECCC
Confidence 9999998 88999999999999999999997766 443 235999999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++++.||.+.|+..|+|++| +..+++||++|+|+|.|++|++++|+|+++|+ +|++++++++|++.+++||++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999996 45999999999999999999999999999998 9999999999999999999999998
Q ss_pred CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccC
Q 017336 240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN 318 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 318 (373)
..+.+ +.+.+++. +|++||+++ +..++.+++.|+++ |+++++|..........+.+.+ .++++|.|+..++
T Consensus 217 ~~~~~--~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~ 288 (339)
T COG1064 217 SSDSD--ALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT 288 (339)
T ss_pred cCCch--hhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence 76333 65666553 999999999 79999999999997 9999999985222233444434 4999999999776
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 372 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~ 372 (373)
+.++++++++..++++.+. +.+.++++++++|++.|++++. +|.||++.
T Consensus 289 ---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 289 ---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred ---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 4579999999999988654 4479999999999999999995 59998764
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-64 Score=436.02 Aligned_cols=369 Identities=56% Similarity=1.005 Sum_probs=356.0
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
++||.+.|++++||.++++..++|+.+||+||+.++++|++|.+.+.|..+...||.|+|||.+|+|+.+|.+|+.+++|
T Consensus 7 ~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~G 86 (375)
T KOG0022|consen 7 TCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTVKPG 86 (375)
T ss_pred EEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccccCCC
Confidence 58999999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|+..+...|++|.+|+++..|+|.........+.++.||.++++-+|..++++.++.+|+||.++++..+++++++.+
T Consensus 87 D~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aP 166 (375)
T KOG0022|consen 87 DHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAP 166 (375)
T ss_pred CEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCC
Confidence 99999999999999999999999999999999889998999999999999999999999999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
++.++.+.|.+.|+|.|.++.+++++|+++.|+|-|++|++++|-||..|+.++++++.+++|.+.+++||++..+|+.+
T Consensus 167 l~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d 246 (375)
T KOG0022|consen 167 LEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKD 246 (375)
T ss_pred hhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999885
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 322 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 322 (373)
....+.+.+.+.|++|+|+-|||+|+.+.+.+++.+...+||.-+++|.......+.+.++.+.++.++.|+.++.+.++
T Consensus 247 ~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~ 326 (375)
T KOG0022|consen 247 LKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSK 326 (375)
T ss_pred ccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccch
Confidence 44458889999999999999999999999999999999999999999999888889999998889999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
.++..+++...++++.+.+++++++||+++++||+.|.+++..|.|+.+
T Consensus 327 ~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 327 SDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred hhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999998864
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-59 Score=409.13 Aligned_cols=342 Identities=27% Similarity=0.460 Sum_probs=298.6
Q ss_pred ccchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCC---CCCCccccccceEEEEEeCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD 78 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~ 78 (373)
.|+|+++...+. +++++.|.|++ .|+||+|++.++|||.||++.++..... .+.|+++|||.+|+|.++|+.|++
T Consensus 4 ~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~ 82 (354)
T KOG0024|consen 4 DNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH 82 (354)
T ss_pred ccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence 488999888887 99999999987 9999999999999999999999875433 347999999999999999999999
Q ss_pred CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336 79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 158 (373)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 158 (373)
+|+||||++.|..+|+.|++|++|+||+|++..+. +..+.+ |++++|++.++++++++|
T Consensus 83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~------------------G~la~y~~~~~dfc~KLP 141 (354)
T KOG0024|consen 83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVD------------------GTLAEYYVHPADFCYKLP 141 (354)
T ss_pred cccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcC------------------CceEEEEEechHheeeCC
Confidence 99999999999999999999999999999998888 433333 499999999999999999
Q ss_pred CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336 159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238 (373)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi 238 (373)
+++|++++|.+. +++++|+| .+++++++|++|||+|+|++|++++.+||.+|+.+|++++..++|++.+++||++.+.
T Consensus 142 d~vs~eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~ 219 (354)
T KOG0024|consen 142 DNVSFEEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD 219 (354)
T ss_pred CCCchhhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence 999999999887 79999998 5789999999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCC--ccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEe
Q 017336 239 NTSEHD--RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF 315 (373)
Q Consensus 239 ~~~~~~--~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 315 (373)
+....+ ..+.+.++...+. .+|+.|||+|....++.++.+++.+ |++++.|......+++.... ..+++.+.|++
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v-~~kE~~~~g~f 297 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDV-ALKEVDLRGSF 297 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhh-hhheeeeeeee
Confidence 655433 2344555555554 6999999999988999999999997 99999998765544443333 34999999987
Q ss_pred ccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC--ceeEEEecCC
Q 017336 316 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISMED 373 (373)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~--~~k~v~~~~~ 373 (373)
-+. ..++...++++++|++.+++++++.|+++++.+||+.+.+++ ..|++++..+
T Consensus 298 ry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 298 RYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 433 237999999999999999999999999999999999999888 4599988654
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-56 Score=386.65 Aligned_cols=339 Identities=28% Similarity=0.469 Sum_probs=293.3
Q ss_pred cchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336 4 TAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 4 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
++++.+.++++ ++++.+++.|+|+++||+|+|+|||||++|++.+.|.++...+|+|+|||++|+|+++|++|+.|++
T Consensus 10 ~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~V~~~ki 89 (360)
T KOG0023|consen 10 QFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSNVTGFKI 89 (360)
T ss_pred hEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCCcccccc
Confidence 67889999888 5778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEee-cCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 82 GDHVLP-VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 82 Gd~V~~-~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
||||-+ ....+|+.|++|+.+++++|+.... ++.|+. .||.. ..|+|++|+++++.+++++|++
T Consensus 90 GD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~-t~~g~~-~DGt~-------------~~ggf~~~~~v~~~~a~kIP~~ 154 (360)
T KOG0023|consen 90 GDRVGVGWLNGSCLSCEYCKSGNENYCPKMHF-TYNGVY-HDGTI-------------TQGGFQEYAVVDEVFAIKIPEN 154 (360)
T ss_pred cCeeeeeEEeccccCccccccCCcccCCceeE-eccccc-cCCCC-------------ccCccceeEEEeeeeEEECCCC
Confidence 999965 5667899999999999999995222 222544 44422 2378999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~ 239 (373)
++++.||.+.|+..|+|.+| +..++.||+++.|.|+|++|++++|+||++|. +|+++++++ +|.+.++.||++.+++
T Consensus 155 ~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~ 232 (360)
T KOG0023|consen 155 LPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVD 232 (360)
T ss_pred CChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEE
Confidence 99999999999999999985 66888999999999997799999999999999 899999987 6667778899999887
Q ss_pred CC-CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEecc
Q 017336 240 TS-EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG 317 (373)
Q Consensus 240 ~~-~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 317 (373)
.. +.+ +.+.+...+++++|-|.+. ....++.++.+|+.+ |++|++|.+.. .+.++.+++. +.+.|.||.++
T Consensus 233 ~~~d~d--~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG 305 (360)
T KOG0023|consen 233 STEDPD--IMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVG 305 (360)
T ss_pred ecCCHH--HHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeeccc
Confidence 66 444 8888888888788888877 336788999999997 99999999874 5566666555 89999999987
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ceeEEEecC
Q 017336 318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISME 372 (373)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~k~v~~~~ 372 (373)
+ +.+.++++++..++.+... .+..+++++++||+.|++++ .+|.|+++.
T Consensus 306 ~---~ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 306 S---RKETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred c---HHHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 7 4578999999999977543 58899999999999999999 469998864
No 6
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.8e-55 Score=414.60 Aligned_cols=367 Identities=49% Similarity=0.921 Sum_probs=303.5
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++...+++++++++|.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 88999999888899999999999999999999999999999999888765556799999999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
||++.+..+|+.|.+|+.|+++.|.+.......|+. .+|..++..+|..++++.+.|+|+||+.+++..++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999999999999999999999999874322112322 1221222233333333334579999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~ 243 (373)
++++.+++++.|||+++.+++.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998788899999999999999999999999999999779999999999999999999998887653
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT 323 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 323 (373)
+..+.+.+++.+++++|++||++|++..+..+++++++++|+++.+|.......+......+.++..+.++..+......
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 33466777777777899999999987888999999987339999999754222333333333344456776544333345
Q ss_pred CHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 324 DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 324 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
++.++++++.++++.++++++++|+|+++++|++.+.+++..|++|++
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 689999999999998888899999999999999999888777999875
No 7
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=5.4e-55 Score=414.52 Aligned_cols=371 Identities=52% Similarity=1.009 Sum_probs=306.1
Q ss_pred CcccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCC
Q 017336 1 MSSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL 79 (373)
Q Consensus 1 m~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~ 79 (373)
|.+|||+++..+++++++++++.|.|+++||+|||.++|+|++|++.+.|..+ ...+|.++|||++|+|+++|++++.|
T Consensus 8 ~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~ 87 (381)
T PLN02740 8 VITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDL 87 (381)
T ss_pred ceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcC
Confidence 45799999999887789999999999999999999999999999999888653 24578999999999999999999999
Q ss_pred CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCC--CccccccCCcceeeEEEEecCceEeC
Q 017336 80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSING--EPVNHFLGTSTFSEYTVVHSGCVAKI 157 (373)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g--~~~~~~~~~G~~a~~~~v~~~~~~~~ 157 (373)
++||||++.+..+|+.|.+|+++.++.|++....+..+....+|..++...| ....+....|+|+||+.+++++++++
T Consensus 88 ~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~i 167 (381)
T PLN02740 88 KAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKI 167 (381)
T ss_pred CCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEEC
Confidence 9999999999999999999999999999986543221111001111111000 00011112479999999999999999
Q ss_pred CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336 158 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237 (373)
Q Consensus 158 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v 237 (373)
|+++++++++.+++++.|||+++.+.+.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.+
T Consensus 168 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~ 247 (381)
T PLN02740 168 DPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF 247 (381)
T ss_pred CCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEE
Confidence 99999999999999999999987788899999999999999999999999999999679999999999999999999998
Q ss_pred ecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEecc
Q 017336 238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 317 (373)
Q Consensus 238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 317 (373)
+++.+.+.++.+.+++.+++++|++||++|++..+..+++++++++|+++.+|.......+.+....+.+++++.|+..+
T Consensus 248 i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~ 327 (381)
T PLN02740 248 INPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFG 327 (381)
T ss_pred EecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecC
Confidence 88765433477778877766899999999988889999999988339999999865433344444334478899998776
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
.+....++.++++++.++++++.++++++|+|+|+++|++.+.+++..|++|.+
T Consensus 328 ~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 328 DFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred CCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 554445688999999999998888899999999999999999988888999864
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=7.5e-55 Score=412.41 Aligned_cols=361 Identities=40% Similarity=0.714 Sum_probs=302.4
Q ss_pred cchhhhccCCC--------CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCC
Q 017336 4 TAAAVAWEAGK--------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 75 (373)
Q Consensus 4 ~~a~~~~~~~~--------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~ 75 (373)
|||+++.+++. .+++++++.|+|+++||+|||.+++||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 79999998763 389999999999999999999999999999999888653 356899999999999999999
Q ss_pred CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceE
Q 017336 76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA 155 (373)
Q Consensus 76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~ 155 (373)
++.|++||||++.+..+|+.|..|++|++|.|++.......|.. .+|..++..++.-+.+..+.|+|+||+.++++.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999988889999999999999999876544322322 11111122222222222334799999999999999
Q ss_pred eCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336 156 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235 (373)
Q Consensus 156 ~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~ 235 (373)
++|+++++++++.++++++|||+++.+.+.++++++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999887888999999999999999999999999999996799999999999999999999
Q ss_pred eeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEE
Q 017336 236 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGT 314 (373)
Q Consensus 236 ~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~ 314 (373)
.++++.+.+ +.+.+++.+++++|++|||+|.+..+..++++++++ |+++.+|.......+.++...+ .+++++.|+
T Consensus 239 ~~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~ 315 (371)
T cd08281 239 ATVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS 315 (371)
T ss_pred eEeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence 999876654 778888887778999999999878899999999997 9999999765333344444434 389999998
Q ss_pred eccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336 315 FFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 369 (373)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~ 369 (373)
..+.+...+++.++++++.++++++.++++++|+|+++++|++.+.+++..|.++
T Consensus 316 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 316 YMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred ecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 7665444457889999999999998888999999999999999999988765543
No 9
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.4e-54 Score=410.55 Aligned_cols=367 Identities=77% Similarity=1.293 Sum_probs=308.0
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
+|||+++..++++++++++++|+|+++||+|||.++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG 81 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence 79999999988889999999999999999999999999999999988876656779999999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|||++.+..+|+.|..|++++++.|.+.......|....++...+...|...+++...|+|+||+.+++..++++|++++
T Consensus 82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~ 161 (369)
T cd08301 82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP 161 (369)
T ss_pred CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence 99999999999999999999999998754332223221122122222222222222347999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+++++.+++++.|||+++++.++++++++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++|++.++++.+
T Consensus 162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 241 (369)
T cd08301 162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD 241 (369)
T ss_pred HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence 99999999999999998888889999999999999999999999999999867999999999999999999998888765
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 322 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 322 (373)
.+..+.+.+++.+++++|++||++|++..+..+++++++++|+++.+|.......+.+....+.+++++.|+..+.+..+
T Consensus 242 ~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 321 (369)
T cd08301 242 HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPK 321 (369)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChH
Confidence 33336677777777689999999998778899999999932999999987543344444443457899999877665555
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 369 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~ 369 (373)
++++++++++.++++++.++++++|+|+++++|++.+.+++..|++|
T Consensus 322 ~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 322 TDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred HHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 57889999999999988888999999999999999999998888886
No 10
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.6e-54 Score=409.80 Aligned_cols=367 Identities=55% Similarity=0.973 Sum_probs=305.2
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
+|||+++...+++++++++|.|.|+++||+|||+++++|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG 81 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG 81 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence 68999999888889999999999999999999999999999999988876656789999999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|||++.+..+|+.|.+|++++++.|++.......|.. ++|..++..+|....++.+.|+|+||+.++++.++++|++++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 9999999999999999999999999875432222322 122112222232222333457999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+++++.+++++.|||+++.+.+.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 99999999999999998777788999999999999999999999999999967999999999999999999999998766
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 322 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 322 (373)
.+.++.+.+++.+++++|+|||++|++..+..+++++++++|+++.+|.......+......+.+...+.++..+.+...
T Consensus 241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (368)
T cd08300 241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR 320 (368)
T ss_pred cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence 43347777888877789999999998778999999998744999999976422223333333334456777766555555
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 370 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~ 370 (373)
+++.++++++.++++.+.++++++|+|+++++|++.+.+++..|++++
T Consensus 321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 678999999999999888889999999999999999988887888874
No 11
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.1e-53 Score=402.70 Aligned_cols=366 Identities=57% Similarity=1.025 Sum_probs=300.9
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
.|||+++.++++.+++++++.|.|+++||+|||.++|+|++|++.+.+. ..+|.++|||++|+|+++|++++.|++|
T Consensus 12 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~---~~~p~i~GhE~~G~V~~vG~~v~~~~~G 88 (378)
T PLN02827 12 TCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRIFGHEASGIVESIGEGVTEFEKG 88 (378)
T ss_pred eeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC---CCCCeeecccceEEEEEcCCCCcccCCC
Confidence 4899999888777999999999999999999999999999999987663 2468899999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|++.+..+|+.|.+|++|++++|++.... ..|....+....+...|..+++....|+|+||+.++++.++++|++++
T Consensus 89 drV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~ 167 (378)
T PLN02827 89 DHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAP 167 (378)
T ss_pred CEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCC
Confidence 9999999999999999999999999864221 012111111111222222222222347999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+++++.+++++.++|+++++.++++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++.+
T Consensus 168 ~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~ 247 (378)
T PLN02827 168 LHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND 247 (378)
T ss_pred HHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc
Confidence 99999998888999987777788999999999999999999999999999967888888999999999999999988765
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 322 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 322 (373)
.+..+.+.+++.+++++|++||++|.+..+..+++.+++++|+++.+|.......+......+.+++++.|+....+...
T Consensus 248 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 327 (378)
T PLN02827 248 LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPK 327 (378)
T ss_pred cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchh
Confidence 32337777887776689999999998778899999999933999999986533222222223458999999876655444
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 372 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~ 372 (373)
.++.++++++.++++++.++++++|+|+++++|++.+.+++..|+||.++
T Consensus 328 ~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 328 SDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred hhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 57889999999999988778999999999999999999888789999875
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=5.3e-53 Score=398.01 Aligned_cols=356 Identities=37% Similarity=0.626 Sum_probs=299.1
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
+|||+++.++++++++++++.|.|+++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 699999999998899999999999999999999999999999998887543 3478999999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|++.+..+|+.|..|.+|+++.|...... ..+....+| .......+.|+|+||+.++++.++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence 9999999999999999999999999753211 000000001 0000001247999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+++++.+++.+.+||.++.+.+.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.++++.+
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988777888999999999999999999999999999966999999999999999999999998876
Q ss_pred CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEeccCCC
Q 017336 243 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYK 320 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~ 320 (373)
.+ +.+.+.+.+++ ++|++|||+|++..+..++++++++ |+++.+|.......+.++.. .+.+++++.++..+...
T Consensus 231 ~~--~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 307 (358)
T TIGR03451 231 TD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL 307 (358)
T ss_pred cC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence 55 77888888876 8999999999877899999999997 99999998653323344433 23488899888654333
Q ss_pred CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
..++++++++++.++++++.++++++|+|+++++|++.+.+++..|+++.+
T Consensus 308 ~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 308 PERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred cHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 345788999999999998888899999999999999999988877888753
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.7e-52 Score=395.52 Aligned_cols=364 Identities=57% Similarity=0.996 Sum_probs=303.7
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
.|||+++...+++++++++|.|.|+++||+|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus 2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08277 2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKPG 80 (365)
T ss_pred ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCCC
Confidence 689999998888899999999999999999999999999999999887554 4578999999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|++.+..+|+.|.+|.+|.++.|++..+... |.. .++..+....|...+.+.+.|+|+||+.++++.++++|++++
T Consensus 81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRANES-GLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CEEEECCCCCCCCCchhcCcCcccCcCcccccc-ccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 999999999999999999999999998654421 221 122122222232222233457999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+++++.++++++|||+++.+.+.++++++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.+++..+
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~ 238 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD 238 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc
Confidence 99999999999999998778889999999999999999999999999999977999999999999999999999888765
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 322 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 322 (373)
.+..+.+.+++.+++++|+|||++|+...+..+++++++++|+++.+|.... ....+....+..++++.|+..+.+...
T Consensus 239 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~ 317 (365)
T cd08277 239 SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKSR 317 (365)
T ss_pred ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCChH
Confidence 4333567777777678999999999878889999999873499999998642 223333333445788888877665444
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 370 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~ 370 (373)
.++.++++++.++++++.++++++|+|+|+++|++.+.+++..|++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 318 SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 578999999999999888889999999999999999988887788874
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=6.6e-52 Score=388.03 Aligned_cols=337 Identities=29% Similarity=0.467 Sum_probs=288.2
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++..++. +++++++.|.|+++||+||+.++++|++|++.+.+.+. ...+|.++|||++|+|+++|++++.|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 78999887654 99999999999999999999999999999998776533 23358899999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|++.+..+|++|+.|+.|+++.|.+..+. .|. ...|+|+||+.+++++++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~--~g~-------------------~~~G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRAA--YGW-------------------NRDGGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCcccc--ccc-------------------CCCCcceeEEEechHHeEECCCCCC
Confidence 9999999999999999999999999865431 121 1236999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+++++.++++++|||+++ ..+.+.++++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999986 5678899999999999999999999999999955999999999999999999999988765
Q ss_pred CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCC
Q 017336 243 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 321 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 321 (373)
.+ .+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.... ..+......+.+++++.|+....
T Consensus 218 ~~---~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~--- 289 (339)
T cd08239 218 DD---VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS--- 289 (339)
T ss_pred ch---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---
Confidence 43 4556667766 8999999999977778999999997 99999997542 22222222344889999987543
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
.+++.++++++.++++.+.++++++|+|+++++|++.+.+++.+|+++++
T Consensus 290 ~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 290 VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 34689999999999998888899999999999999999888777999874
No 15
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=2.9e-50 Score=375.64 Aligned_cols=343 Identities=30% Similarity=0.435 Sum_probs=280.7
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCc-cccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR-IFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~-i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
||+++++.++...++++.+.|.+.|+||+|||.++|||+||++.+++..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 56777777666455778877888999999999999999999999999777666666 99999999999999 77889999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCc-eEeCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-VAKINPLA 161 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~-~~~~p~~~ 161 (373)
|||++.+..+|+.|++|+.|.+|.|++.++. |..... ....|+|+||+.+|.++ +.++|+++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~---g~~~~~--------------~~~~G~~aEyv~vp~~~~~~~~pd~~ 142 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFY---GYAGLG--------------GGIDGGFAEYVRVPADFNLAKLPDGI 142 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCcccc---cccccc--------------CCCCCceEEEEEeccccCeecCCCCC
Confidence 9999999999999999999999999976544 222100 00136999999999755 44558888
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNT 240 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~ 240 (373)
+.+++++..++.++|++........++.+|+|+|+|++|++++++++.+|+.+|++++.+++|++++++ .+++.+++.
T Consensus 143 -~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~ 221 (350)
T COG1063 143 -DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP 221 (350)
T ss_pred -ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC
Confidence 667777777999997763344555556699999999999999999999999999999999999999999 667766665
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEeccC
Q 017336 241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGN 318 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~ 318 (373)
.+.+ ....+.+.+++ ++|++|||+|.+..+..+++.++++ |+++++|....... .+.. ..+.+++++.|+..
T Consensus 222 ~~~~--~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~-- 295 (350)
T COG1063 222 SEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLR-- 295 (350)
T ss_pred cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccC--
Confidence 5543 67778888888 9999999999988999999999997 99999999865443 2322 23459999999842
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEec
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISM 371 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~~~ 371 (373)
.....++..+++++.+|++.+.+++++.++++++++|++.+.+.+. .|+++.+
T Consensus 296 ~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 296 PSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 1223579999999999999999999999999999999999987653 4888763
No 16
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.4e-50 Score=377.72 Aligned_cols=335 Identities=21% Similarity=0.330 Sum_probs=275.9
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc-cCCC--CCCCCccccccceEEEEEeCCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSDL 79 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~ 79 (373)
.+||++++.++. +++++++.| ++++||||||.++|||++|++.+. |..+ ...+|.++|||++|+|+++ +++.|
T Consensus 4 ~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~ 79 (343)
T PRK09880 4 KTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL 79 (343)
T ss_pred cceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence 478999887777 999999997 689999999999999999999875 3322 2357999999999999999 67899
Q ss_pred CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336 80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
++||||++.+..+|+.|++|++|+++.|++..+. |....+ ....|+|+||++++++.++++|+
T Consensus 80 ~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P~ 142 (343)
T PRK09880 80 KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF---GSAMYF--------------PHVDGGFTRYKVVDTAQCIPYPE 142 (343)
T ss_pred CCCCEEEECCCCCCcCChhhcCCChhhCCCccee---eccccc--------------CCCCCceeeeEEechHHeEECCC
Confidence 9999999999999999999999999999875543 321000 01136999999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
++++++++ +..++++||+++. .....++++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.+++
T Consensus 143 ~l~~~~aa-~~~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~ 220 (343)
T PRK09880 143 KADEKVMA-FAEPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVN 220 (343)
T ss_pred CCCHHHHH-hhcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99987655 4457889999864 456668999999999999999999999999977999999999999999999999998
Q ss_pred CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccC
Q 017336 240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN 318 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 318 (373)
+++.+ +.+.. +. .+++|++||++|++..+..++++++++ |+++.+|...... .++... +.+++++.|+...
T Consensus 221 ~~~~~--~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~k~~~i~g~~~~- 292 (343)
T PRK09880 221 PQNDD--LDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPP--EFPMMTLIVKEISLKGSFRF- 292 (343)
T ss_pred CCccc--HHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCC--ccCHHHHHhCCcEEEEEeec-
Confidence 77654 43322 22 236999999999877889999999997 9999999754322 233333 3488999987642
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
.+++.++++++.++++++.++++++|+|+++++|++.+.+++. +|+++++
T Consensus 293 ---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 ---TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ---cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 3579999999999999888889999999999999999988764 6998864
No 17
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=4.1e-50 Score=369.79 Aligned_cols=315 Identities=27% Similarity=0.387 Sum_probs=265.6
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccC-CCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++.+.++| ++++++|.|.|+++||||||.+++||+.|+..++|. .+..++|.|+|.|++|+|+++|++|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 788888888876 888999999999999999999999999999999986 34456899999999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||||+... .. + ..|+|+||+.+|++.++++|++
T Consensus 81 ~GdrV~~~~-~~------------------------~---------------------~~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALG-GV------------------------G---------------------RDGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEcc-CC------------------------C---------------------CCCcceeEEEecHHHceeCCCC
Confidence 999999652 00 0 1369999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+|+++||+++++++|||+++....+++++++|||+|+ |++|.+++||||++|+ .++++.+++++.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999988899999999999986 9999999999999998 6666667777777999999999999
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 317 (373)
+.+.+ |.+.+++++++ ++|+|||++|+ +.+..++++|+++ |+++.+|..++.....++...+. +.++..+....
T Consensus 194 y~~~~--~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~ 269 (326)
T COG0604 194 YREED--FVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG 269 (326)
T ss_pred CCccc--HHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence 88887 99999999998 89999999999 7888899999997 99999999874223333333333 77777777654
Q ss_pred CC---CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcC-C-ceeEEEec
Q 017336 318 NY---KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKG-E-GLRCIISM 371 (373)
Q Consensus 318 ~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~-~-~~k~v~~~ 371 (373)
.. ...+.+.++.+++.+|++++. ++++|||++..++......+ + .+|++|++
T Consensus 270 ~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 270 SRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred ecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 33 112356778999999977654 78999999976666655444 4 56999864
No 18
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=9.9e-50 Score=378.26 Aligned_cols=345 Identities=23% Similarity=0.320 Sum_probs=272.7
Q ss_pred ccchhhhccCCCCeEEEEeecCCCC-------CCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQ-------AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 75 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~ 75 (373)
-|||+++..+++ +++++++.|+|+ ++||||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|++
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 589999888776 999999999874 68999999999999999999887543 357899999999999999999
Q ss_pred CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccC---cccccccCCCcccccCCCccccccCCcceeeEEEEecC
Q 017336 76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP---VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG 152 (373)
Q Consensus 76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~---~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~ 152 (373)
|+.|++||||++.+..+|+.|++|++|++|.|.+..... ..|+. ..| .-.|+|+||+.+++.
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~---------~~~------~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYV---------DMG------GWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccc---------ccC------CCCCceEEEEEechh
Confidence 999999999999999999999999999999998642110 01110 000 013699999999964
Q ss_pred --ceEeCCCCCCc----hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHH
Q 017336 153 --CVAKINPLAPL----DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 226 (373)
Q Consensus 153 --~~~~~p~~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~ 226 (373)
.++++|++++. ..++.+.+++.++|+++ .+..+.++++|||.|+|++|++++|+|+.+|++.|++++++++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998754 34667778899999985 457899999999998999999999999999996677677888999
Q ss_pred HHHHhcCCceeecCC-CCCccHHHHHHHHcCC-CccEEEEccCCh--------------HhHHHHHHHhhcCCcEEEEEc
Q 017336 227 EEAKKFGVTDFVNTS-EHDRPIQEVIAEMTNG-GVDRSVECTGNI--------------DNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 227 ~~~~~lg~~~vi~~~-~~~~~~~~~~~~~~~~-~~d~vid~~g~~--------------~~~~~~~~~l~~~~g~~v~~g 290 (373)
++++++|++. +++. +.+ +.+.+.+.+++ ++|++||++|.+ ..++.++++++++ |+++.+|
T Consensus 224 ~~a~~~Ga~~-v~~~~~~~--~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G 299 (393)
T TIGR02819 224 AQARSFGCET-VDLSKDAT--LPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPG 299 (393)
T ss_pred HHHHHcCCeE-EecCCccc--HHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEee
Confidence 9999999974 4433 223 66777777776 899999999985 3799999999997 9999999
Q ss_pred CCCC-Cc-ee---------eccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCcee-eeeccccHHHHHH
Q 017336 291 VPSK-DA-VF---------MTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFE 357 (373)
Q Consensus 291 ~~~~-~~-~~---------~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-~~~~l~~~~~a~~ 357 (373)
.... +. .. .+.... +.+++++.++. ....+.+.++++++.++++++.++++ ++|+|+++++|++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~ 376 (393)
T TIGR02819 300 LYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYA 376 (393)
T ss_pred ecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHH
Confidence 8631 11 11 111111 12455555532 11112346799999999999887777 7899999999999
Q ss_pred HHHcCCceeEEEecC
Q 017336 358 YMVKGEGLRCIISME 372 (373)
Q Consensus 358 ~l~~~~~~k~v~~~~ 372 (373)
.+.+++..|++|++.
T Consensus 377 ~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 377 EFDAGAAKKFVIDPH 391 (393)
T ss_pred HHhhCCceEEEEeCC
Confidence 998887789999763
No 19
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-48 Score=365.31 Aligned_cols=339 Identities=23% Similarity=0.353 Sum_probs=279.7
Q ss_pred cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++.+++. +++.+.+.|.| +++||+|||.++++|++|+..+.... ...+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 68999988775 99999999998 59999999999999999987532211 12358899999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|++.+..+|+.|++|..|.++.|.+..+. |. ...|+|+||+.++++.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~-------------------~~~G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDFI---GS-------------------RRDGGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCccee---cc-------------------CCCCccceeEEeehHHeEECcCCCC
Confidence 9999999999999999999999999764322 21 1236999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+++++.+. .+.++|++ .....++++++|||+|+|++|++++|+|+.+|++.|+++++++++++.++++|++.++++++
T Consensus 137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99988774 45667776 46678899999999999999999999999999966889999999999999999999888765
Q ss_pred CCccHHHHHHHHcCC-Ccc-EEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc--hhhcccceEEEEeccC
Q 017336 243 HDRPIQEVIAEMTNG-GVD-RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP--INVLNERTLKGTFFGN 318 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~-~~d-~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~~~~~~~~i~g~~~~~ 318 (373)
.+ .+.+.+.+.+ ++| ++|||+|++..+..++++++++ |+++.+|.......+.... ..+.+++++.|+..+.
T Consensus 215 ~~---~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 290 (347)
T PRK10309 215 MS---APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNY 290 (347)
T ss_pred cC---HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccc
Confidence 43 3445566655 888 9999999978899999999997 9999999765332222111 2234889999987543
Q ss_pred CC--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336 319 YK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 372 (373)
Q Consensus 319 ~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~ 372 (373)
.. ..+++++++++++++++++.++++++|+|+++++|++.+.+++. +|++++++
T Consensus 291 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 291 SSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred cCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 22 13568899999999999888889999999999999999988874 69998763
No 20
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=8.1e-48 Score=364.18 Aligned_cols=366 Identities=48% Similarity=0.843 Sum_probs=297.0
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
+|||.+++.++++++++++|.|.|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus 7 ~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~G 85 (373)
T cd08299 7 KCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPG 85 (373)
T ss_pred eeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCCC
Confidence 588999898888899999999999999999999999999999999887653 3568899999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|++.+..+|+.|.+|.+++.+.|++.......|.. .++..++...|.....+.+.|+|+||++++++.++++|++++
T Consensus 86 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~ 164 (373)
T cd08299 86 DKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAP 164 (373)
T ss_pred CEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCCC
Confidence 9999999999999999999999999875432111221 111111212222222232357999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+++++.+++++++||+++...+.++++++|||+|+|++|++++++|+.+|+++|+++++++++++.++++|++.+++..+
T Consensus 165 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~ 244 (373)
T cd08299 165 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD 244 (373)
T ss_pred hHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc
Confidence 99999999999999998778889999999999998999999999999999867999999999999999999998888765
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHh-hcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP 321 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 321 (373)
.+.++.+.+.+.+++++|+++||+|++..+..++..+ +++ |+++.+|.......+.+....+.++.++.++..+.+..
T Consensus 245 ~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 323 (373)
T cd08299 245 YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKS 323 (373)
T ss_pred cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCcc
Confidence 4333566666666668999999999767777777765 465 99999997653333444443344677888887665554
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
.+++.++++.+.++.+.+.+++++.|+++++.+|++.+.+++..|+++++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 45677888888888777777789999999999999999887777888764
No 21
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=3.6e-48 Score=364.76 Aligned_cols=337 Identities=22% Similarity=0.354 Sum_probs=269.6
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
+.++.+++.++.+++.+++.|.|+++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||
T Consensus 13 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGd 92 (360)
T PLN02586 13 AFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGD 92 (360)
T ss_pred eeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCccCCCC
Confidence 44555666556688899999999999999999999999999999887655456789999999999999999999999999
Q ss_pred EEeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 84 HVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 84 ~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
+|++.+. .+|+.|.+|++|.++.|++..+... +.. .+| ....|+|+||+.++++.++++|++++
T Consensus 93 rV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~-~~~-~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls 157 (360)
T PLN02586 93 RVGVGVIVGSCKSCESCDQDLENYCPKMIFTYN-SIG-HDG-------------TKNYGGYSDMIVVDQHFVLRFPDNLP 157 (360)
T ss_pred EEEEccccCcCCCCccccCCCcccCCCcccccc-ccc-cCC-------------CcCCCccceEEEEchHHeeeCCCCCC
Confidence 9986544 5799999999999999987543200 000 000 00136999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCceeecCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTS 241 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~~~lg~~~vi~~~ 241 (373)
+++++.+++.+.|+|+++.....++++++|||.|+|++|++++|+|+.+|+ +|++++.++++ .+.++++|++.++++.
T Consensus 158 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~ 236 (360)
T PLN02586 158 LDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVST 236 (360)
T ss_pred HHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCC
Confidence 999999999999999987665667899999999999999999999999999 67777665544 5666889999888765
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCC
Q 017336 242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK 320 (373)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~ 320 (373)
+. +.+++.++ ++|+|||++|++..+..++++++++ |+++.+|..... ..++... +.++..+.++..+.
T Consensus 237 ~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~-- 305 (360)
T PLN02586 237 DP-----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKP--LELPIFPLVLGRKLVGGSDIGG-- 305 (360)
T ss_pred CH-----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCC--CccCHHHHHhCCeEEEEcCcCC--
Confidence 42 23444444 6999999999877889999999997 999999975433 2233333 33677777776432
Q ss_pred CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
.+++.++++++.++++++. + ++|+|+|+++|++.+.+++. +|+++++
T Consensus 306 -~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 306 -IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred -HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 2468999999999988753 3 68999999999999998885 5998875
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=6.9e-48 Score=362.91 Aligned_cols=334 Identities=27% Similarity=0.367 Sum_probs=263.5
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC---CCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++...+.+++++++|.|+|+++||||||+++|||++|++.++|.++. ..+|.++|||++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 688888754444999999999999999999999999999999999886532 246789999999999999999 9999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||||++.+..+|+.|.+|++|+++.|++..+.. .|+. ...|+|+||+.++++.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~-~g~~------------------~~~G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTE-RGIK------------------GLHGFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceec-cCcC------------------CCCccceeEEEeccccEEECCCC
Confidence 9999999999999999999999999998654321 1211 01369999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhh------hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC---ChhHHHHHHh
Q 017336 161 APLDKVCILSCGVSTGLGATL------NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKK 231 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~------~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~---~~~~~~~~~~ 231 (373)
++ + ++.+..++.+++.++. ......++++|||+|+|++|++++|+|+.+|+ +|+++++ +++|++++++
T Consensus 141 ~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 3 3444445555544322 12235789999999999999999999999999 7998887 6889999999
Q ss_pred cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc----ch-hhc
Q 017336 232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK----PI-NVL 306 (373)
Q Consensus 232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~----~~-~~~ 306 (373)
+|++. +++.+.+ +.+ . . ..+++|+|||++|++..+..++++++++ |+++.+|.......+.+. .. .+.
T Consensus 218 ~Ga~~-v~~~~~~--~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~ 290 (355)
T cd08230 218 LGATY-VNSSKTP--VAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL 290 (355)
T ss_pred cCCEE-ecCCccc--hhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence 99986 4554433 333 1 1 2248999999999877889999999997 999999987642333333 12 234
Q ss_pred ccceEEEEeccCCCCCCCHHHHHHHHHcCCC----CCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 307 NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL----ELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 307 ~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l----~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
+++++.|+.... .+++.++++++.++.+ .+.++++++|+|+|+++|++.+.++. .|++|++
T Consensus 291 k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 291 GNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred cCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 899999976432 3578889999988762 35667899999999999999887554 5998874
No 23
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=3.2e-47 Score=359.53 Aligned_cols=364 Identities=48% Similarity=0.870 Sum_probs=308.4
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
.||+++.+++.++++++.+.|.++++||+|++.++++|++|++...+..+ ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 37888898888899999999999999999999999999999998887543 34678999999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
+|++.+..+|++|.+|++++.++|+...+....|.. .+|...+..+|....++.+.|+|++|+.++++.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999999999999999999999999987766444433 4555556555554444556689999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~ 243 (373)
++++.+++++.+||+++...+.+.++++|||+|+|++|++++|+|+.+|+..|+++++++++.+.++++|++.+++..+.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999999999999988888899999999999889999999999999999668888889999999999999988887665
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhh-cCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH-DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR 322 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 322 (373)
+..+.+.+++.+++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|+.+..+...
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~ 317 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSK 317 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchH
Confidence 3237777877776689999999987788899999999 96 999999875422234444443456778888876666666
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 370 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~ 370 (373)
+.+.++++++.++.+++.++++++|+++++++|++.+.+++..|++++
T Consensus 318 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~~ 365 (365)
T cd05279 318 DSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTILT 365 (365)
T ss_pred hHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 778999999999988876678899999999999999988777788764
No 24
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=2.1e-47 Score=358.68 Aligned_cols=332 Identities=24% Similarity=0.432 Sum_probs=277.7
Q ss_pred hhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccC-CCCCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 017336 7 AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 85 (373)
Q Consensus 7 ~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 85 (373)
+++.+++.++++++.|.|.|+++||+|||.++++|++|++.+.+. .+...+|.++|||++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 345667767899999999999999999999999999999876433 2234678999999999999999999887 99999
Q ss_pred eecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC------
Q 017336 86 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP------ 159 (373)
Q Consensus 86 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~------ 159 (373)
++.+..+|+.|.+|++|+++.|.+.... |.. ..|+|+||+.++++.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKMP---GND-------------------MQGGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCcc---CcC-------------------CCCcccceEEechHHeEECCccccccc
Confidence 9999999999999999999999764322 211 136999999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++++.++.+++++.|+|+++. ...++++++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++.+++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999999999999999864 5789999999999999999999999999999 7999999999999999999998888
Q ss_pred CCCCC-ccHHHHHHHHcCC-Ccc----EEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEE
Q 017336 240 TSEHD-RPIQEVIAEMTNG-GVD----RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLK 312 (373)
Q Consensus 240 ~~~~~-~~~~~~~~~~~~~-~~d----~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~ 312 (373)
+.+.+ .++.+.+++.+++ ++| ++|||+|++..+..++++++++ |+++.+|.......+. ...+ .++.++.
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~--~~~~~~~~~~~~ 293 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYR--LSNLMAFHARAL 293 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcccC--HHHHhhcccEEE
Confidence 76542 2366777788876 776 8999999988888999999997 9999999865333232 2233 3677888
Q ss_pred EEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 313 GTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 313 g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
|++... .+++.++++++.++++++.++++ .|+|+++++|++.+.+++. +|++++
T Consensus 294 g~~~~~---~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 294 GNWGCP---PDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred EEecCC---HHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCccceEEec
Confidence 876422 34689999999999998877665 7999999999999988874 487775
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-47 Score=362.62 Aligned_cols=338 Identities=22% Similarity=0.332 Sum_probs=269.7
Q ss_pred ccchhhhcc--CCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336 3 STAAAVAWE--AGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 3 ~~~a~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
+.||+.+.. .++++++.+++.|.|+++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~ 83 (375)
T PLN02178 4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFK 83 (375)
T ss_pred cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccC
Confidence 345544444 334588889999999999999999999999999999887654445789999999999999999999999
Q ss_pred CCCEEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336 81 VGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 81 ~Gd~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
+||||++.+.. +|+.|++|++|+++.|++..+. +... +..| ....|+|+||+.++++.++++|+
T Consensus 84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~---~~~~-------~~~g-----~~~~G~~aey~~v~~~~~~~lP~ 148 (375)
T PLN02178 84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFT---YNSR-------SSDG-----TRNQGGYSDVIVVDHRFVLSIPD 148 (375)
T ss_pred CCCEEEEcCccCCCCCChhHhCcchhcCCCcccc---cccc-------ccCC-----CcCCCccccEEEEchHHeEECCC
Confidence 99999876655 6999999999999999975432 0000 0000 01136999999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh-HHHHHHhcCCcee
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDF 237 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~-~~~~~~~lg~~~v 237 (373)
++++++++++++...|+|+++..... .+++++|+|.|+|++|++++|+|+.+|+ +|++++.+++ +.+.++++|++++
T Consensus 149 ~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~ 227 (375)
T PLN02178 149 GLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSF 227 (375)
T ss_pred CCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEE
Confidence 99999999999999999988644332 3689999999999999999999999999 6888876644 4788889999998
Q ss_pred ecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEec
Q 017336 238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF 316 (373)
Q Consensus 238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 316 (373)
+++.+. +.+.+.++ ++|++|||+|.+..+..++++++++ |+++.+|..... ..++... +.+++++.|+..
T Consensus 228 i~~~~~-----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~ 298 (375)
T PLN02178 228 LVTTDS-----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKP--LDLPIFPLVLGRKMVGGSQI 298 (375)
T ss_pred EcCcCH-----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCC--CccCHHHHHhCCeEEEEeCc
Confidence 876532 24445544 7999999999876889999999997 999999976433 2333333 348889998765
Q ss_pred cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
+. .+++.++++++.+|++++. + ++|||+++++|++.+.+++. +|+++++
T Consensus 299 ~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 299 GG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred cC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 43 2468899999999988654 4 67999999999999998875 6998876
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.8e-47 Score=353.64 Aligned_cols=320 Identities=22% Similarity=0.301 Sum_probs=267.4
Q ss_pred hhhccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 7 AVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 7 ~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
+.+..++. .++++++|.|.|+++||+|||.++|+|++|++.+.|.++...+|.++|||++|+|+++|++++.|++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 44555553 38899999999999999999999999999999988866544457899999999999999999999999
Q ss_pred CEEeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 83 DHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 83 d~V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
|+|++.+. .+|+.|++|.+|+++.|++..+. |.. ..|+|+||+.++++.++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRYT---GWD-------------------TDGGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCcccC---Ccc-------------------cCCcceeEEEeccccEEECCCCC
Confidence 99987654 47999999999999999875432 321 23699999999999999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~ 241 (373)
++++++.+++++.|||+++ ..+.++++++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999986 46889999999999999999999999999999 799999999999999999999988754
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCC
Q 017336 242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK 320 (373)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~ 320 (373)
+.. .+++|+++++.+....+..++++++++ |+++.+|...... ..+.... +.+++++.++....
T Consensus 218 ~~~-----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~~~-- 282 (329)
T TIGR02822 218 DTP-----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDT-PPLNYQRHLFYERQIRSVTSNT-- 282 (329)
T ss_pred ccC-----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccC-CCCCHHHHhhCCcEEEEeecCC--
Confidence 321 126899999988878899999999997 9999999753221 1222222 34788888876432
Q ss_pred CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336 321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 369 (373)
Q Consensus 321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~ 369 (373)
++++.++++++.++++. +++++|+|+|+++|++.+.+++. +|++|
T Consensus 283 -~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 283 -RADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred -HHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 34578899999999874 46899999999999999998875 48776
No 27
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.4e-46 Score=355.08 Aligned_cols=348 Identities=26% Similarity=0.436 Sum_probs=289.5
Q ss_pred chhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCC------
Q 017336 5 AAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD------ 78 (373)
Q Consensus 5 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~------ 78 (373)
||+++.++++.+++++.+.|.|+++||+|||.++++|++|+....|..+...+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78888988877999999999999999999999999999999988886653567889999999999999999986
Q ss_pred CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC-ceEeC
Q 017336 79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKI 157 (373)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~-~~~~~ 157 (373)
|++||+|++.+..+|+.|..|+.+..++|.+..+. |.....+ + ....|+|+||+.++++ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~-------~-----~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCD-------D-----PHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---ccccccc-------C-----CCCCcccceEEEecCCCceEEC
Confidence 99999999999999999999999999999876544 3221100 0 0113699999999996 79999
Q ss_pred CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336 158 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237 (373)
Q Consensus 158 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v 237 (373)
|++++..+++.++++++|||+++.+.....++++|||+|+|.+|++++|+|+.+|+++|+++++++++.++++++|++.+
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999999889999999998766666799999999999999999999999999778989899999999999999988
Q ss_pred ecCCCCC-ccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEE
Q 017336 238 VNTSEHD-RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGT 314 (373)
Q Consensus 238 i~~~~~~-~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~ 314 (373)
++++..+ .++.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.........+.... +.+++++.++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV 305 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence 8776543 1233567777776 8999999999867889999999997 999999976432233333322 3488888887
Q ss_pred eccCCCCCCCHHHHHHHHHcC--CCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 315 FFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
.... .+++.++++++.++ .+.+.++++++|+++++++|++.+.++...|++|++
T Consensus 306 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 306 HNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred ccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 6432 34688899999888 666777889999999999999999888777998863
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.6e-46 Score=353.20 Aligned_cols=335 Identities=31% Similarity=0.506 Sum_probs=283.9
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-----------CCCCCccccccceEEEEEe
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV 72 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~i~G~e~~G~V~~v 72 (373)
|||+++.+++. +++++++.|+|+++||+||+.++++|++|++.+.+... ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 68999988765 99999999999999999999999999999876553211 1236889999999999999
Q ss_pred CCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC
Q 017336 73 GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG 152 (373)
Q Consensus 73 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~ 152 (373)
|++++.|++||+|++.+..+|++|.+|+++.++.|....+. |.. ...|+|++|+.++++
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI---GLG------------------GGGGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCcee---ccC------------------CCCCceeeEEEechH
Confidence 99999999999999999999999999999999999754322 110 013699999999999
Q ss_pred ceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336 153 CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 232 (373)
Q Consensus 153 ~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l 232 (373)
.++++|+++++++++.+ .++.|||+++ ..++++++++|||+|+|.+|++++|+|+.+|+++|+++++++++.+.++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999988766 5788999986 778899999999999999999999999999997789998999999999999
Q ss_pred CCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccce
Q 017336 233 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERT 310 (373)
Q Consensus 233 g~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~ 310 (373)
|++.++++.+.+ +.+.+++.+++ ++|++||++|++..+..++++++++ |+++.+|..... ..+.... +.++++
T Consensus 217 ga~~~i~~~~~~--~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~ 291 (351)
T cd08233 217 GATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKT 291 (351)
T ss_pred CCCEEECCCccC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcE
Confidence 999999887665 88888888876 7999999999777889999999997 999999986532 2333332 348889
Q ss_pred EEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccH-HHHHHHHHcCCc--eeEEEe
Q 017336 311 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEI-NKAFEYMVKGEG--LRCIIS 370 (373)
Q Consensus 311 i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~-~~a~~~l~~~~~--~k~v~~ 370 (373)
+.++..+. .++++++++++.++++++.++++++|+++|+ ++|++.+.+++. +|++|.
T Consensus 292 i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 292 LTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred EEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 98876432 3579999999999999877778999999997 789999988874 688873
No 29
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.3e-47 Score=322.05 Aligned_cols=313 Identities=26% Similarity=0.294 Sum_probs=270.5
Q ss_pred ccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336 3 STAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 3 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
+.|.+++++.|++ +++++.|.|+|+|+|++||-.|+|+|..|.+.++|.+...+.|++||-|.+|+|+++|++|++++
T Consensus 8 ~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrk 87 (336)
T KOG1197|consen 8 LLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRK 87 (336)
T ss_pred hheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccccc
Confidence 4678888998886 88999999999999999999999999999999999998888999999999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||||+... ..|.|+|+..+|...++++|+.
T Consensus 88 vGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~vpe~ 118 (336)
T KOG1197|consen 88 VGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFKVPEA 118 (336)
T ss_pred cccEEEEec-------------------------------------------------cchhhheeccccceeeccCCcc
Confidence 999998541 1269999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++.+||++...++|||..+.+...+++|++||++.+ |++|+++.||++..|+ .+|++.++++|++.+++.|+++.|+
T Consensus 119 i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~ 197 (336)
T KOG1197|consen 119 ITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPID 197 (336)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceee
Confidence 9999999999999999998888889999999999965 9999999999999999 7888889999999999999999999
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 317 (373)
++.+| +.+.+++++++ |+|+++|.+|. +.+...+.+|++. |.++.+|..++... .++...+. +.+++...++.
T Consensus 198 y~~eD--~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~-p~~l~~ls~k~l~lvrpsl~ 272 (336)
T KOG1197|consen 198 YSTED--YVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLID-PIPLNQLSPKALQLVRPSLL 272 (336)
T ss_pred ccchh--HHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCC-CeehhhcChhhhhhccHhhh
Confidence 99887 99999999988 99999999999 8999999999997 99999998764221 11122222 55555433332
Q ss_pred CCCC-CCC----HHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336 318 NYKP-RTD----LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 372 (373)
Q Consensus 318 ~~~~-~~~----~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~ 372 (373)
.|.+ ..+ ..+++.++.++.+.++ +.++|||+++.+|++++++.+. +|+++...
T Consensus 273 gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 273 GYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred cccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 2322 222 3578888899988776 8999999999999999998885 58888763
No 30
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.6e-45 Score=347.98 Aligned_cols=362 Identities=36% Similarity=0.636 Sum_probs=290.8
Q ss_pred cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336 2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
++|||+++.+++.++++++.+.|.++++||+|||.++++|++|+....+.++ ..+|.++|+|++|+|+++|+++..+++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4899999998777799999999999999999999999999999999887654 346889999999999999999999999
Q ss_pred CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCcc--ccccCCcceeeEEEEecCceEeCCC
Q 017336 82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPV--NHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~--~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
||+|++.+. +|+.|.+|+.++.+.|.+.......|.. ++|...+...++.. ......|+|++|+.+++++++++|+
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 999998764 8999999999999999864422211211 11100000000000 0011247999999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
++++++++.+++++.||+.++.....++++++|||+|+|.+|++++|+|+.+|++.|++++++++|.+.++++|++.+++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99999999999999999998888888999999999988999999999999999977999999999999999999998888
Q ss_pred CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccC
Q 017336 240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN 318 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 318 (373)
+...+ +.+.+.+.+++++|+++||+|++..+..++++++++ |+++.+|..........+...+ .++.++.++....
T Consensus 238 ~~~~~--~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (365)
T cd08278 238 PKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD 314 (365)
T ss_pred CCCcC--HHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence 76654 777777777448999999999778889999999997 9999999763222233344444 4788888776543
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 370 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~ 370 (373)
....+.+.++++++.++.+.+.+ +...|+++++++|++.+.+++..|++++
T Consensus 315 ~~~~~~~~~~~~~l~~g~l~~~~-~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 315 SVPQEFIPRLIELYRQGKFPFDK-LVTFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred cChHHHHHHHHHHHHcCCCChHH-heEEecHHHHHHHHHHHHCCCceEEEEC
Confidence 33345678899999999885433 3458999999999999998887788874
No 31
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=7.5e-46 Score=348.91 Aligned_cols=338 Identities=22% Similarity=0.340 Sum_probs=274.7
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
++|++++.+++++++++++.|+|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|++++.|++||
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd 89 (357)
T PLN02514 10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGD 89 (357)
T ss_pred EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCCC
Confidence 78899999999999999999999999999999999999999998887655445789999999999999999999999999
Q ss_pred EEeecCcC-CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 84 HVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 84 ~V~~~~~~-~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
+|++.+.. .|+.|.+|++|.++.|++..+....++ ..| ....|+|+||+.++++.++++|++++
T Consensus 90 ~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~----------~~g-----~~~~G~~aey~~v~~~~~~~iP~~~~ 154 (357)
T PLN02514 90 IVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY----------TDG-----KPTQGGFASAMVVDQKFVVKIPEGMA 154 (357)
T ss_pred EEEEcCccccCCCChhHhCCCcccCCCccccccccc----------cCC-----ccCCCccccEEEEchHHeEECCCCCC
Confidence 99865544 699999999999999987532100000 000 01236999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH-HHhcCCceeecCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTS 241 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~ 241 (373)
+++++.+++++.|||+++......+++++|+|+|+|++|++++|+|+.+|+ +|+++++++++++. ++++|++.++++.
T Consensus 155 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~ 233 (357)
T PLN02514 155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSS 233 (357)
T ss_pred HHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCC
Confidence 999999999999999987666667899999999999999999999999999 67777777766654 4679998877654
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCC
Q 017336 242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK 320 (373)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~ 320 (373)
+. +.+.+.+. ++|++||++|....+..++++++++ |+++.+|..... ..+.... +.+++++.|+..+.
T Consensus 234 ~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~-- 302 (357)
T PLN02514 234 DA-----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTP--LQFVTPMLMLGRKVITGSFIGS-- 302 (357)
T ss_pred Ch-----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCC--CcccHHHHhhCCcEEEEEecCC--
Confidence 32 23444443 7999999999867889999999997 999999986533 2333333 34888999987543
Q ss_pred CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336 321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 372 (373)
Q Consensus 321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~ 372 (373)
.+++.++++++.++++. +++ ++|+|+++.+|++.+.+++. +|+++.++
T Consensus 303 -~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 303 -MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred -HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 23688999999999764 344 68999999999999998886 59998875
No 32
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2.6e-44 Score=339.55 Aligned_cols=360 Identities=42% Similarity=0.720 Sum_probs=292.7
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++..++.++++.+++.|.++++||+|++.++++|+.|+..+.|..+ ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 69999999888899999999999999999999999999999998877554 45678999999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
+|++.+..+|++|.+|++++.++|.+..+... |. .+++..+....|.......+.|+|++|+.++++.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILG-GQ-LPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccccc-cc-cCCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 99999999999999999999999986532110 00 01111111111211111223479999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~ 243 (373)
++++.+++++.+||.++.....+.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|++++++....
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~ 237 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED 237 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCc
Confidence 99999999999999988888899999999999889999999999999999559999899999999999999888877665
Q ss_pred CccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCC
Q 017336 244 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP 321 (373)
Q Consensus 244 ~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~ 321 (373)
+ +.+.+.+.+.+ ++|+++|++++...+..++++++++ |+++.+|.........+....+. ++..+.++.+.....
T Consensus 238 ~--~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (363)
T cd08279 238 D--AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP 314 (363)
T ss_pred c--HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence 4 77778777755 8999999999767889999999997 99999987543223333433333 666767765544344
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 369 (373)
Q Consensus 322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~ 369 (373)
.+.+++++++++++.+.+.+++.+.|+++++++|++.+.+++..|.|+
T Consensus 315 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 315 RRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 557889999999998876656788999999999999999888776665
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.3e-44 Score=338.61 Aligned_cols=342 Identities=25% Similarity=0.335 Sum_probs=282.6
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++.+++. +++.+.+.|.++++||+|||.++++|++|++.+.+.++...+|.++|||++|+|+++|++++.+++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 78999988876 89999999999999999999999999999988877655556789999999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCCC
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA 161 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~~ 161 (373)
+|++.+..+|++|..|..|+++.|.+... |.... ....|+|+||+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~----~~~~~---------------~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG----GWKFS---------------NFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC----Ccccc---------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence 99998888999999999999999975321 11000 0123699999999974 899999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~ 241 (373)
++++++.++..+.|||++ ...+.++++++|||+|+|.+|++++|+|+.+|+..|+++++++++.+.++++|++.++++.
T Consensus 141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 999999998899999998 4678899999999998899999999999999997799999999999999999999998876
Q ss_pred CCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh---cccceEEEEecc
Q 017336 242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV---LNERTLKGTFFG 317 (373)
Q Consensus 242 ~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~ 317 (373)
+.+ +.+.+...+.+ ++|+++|++|++..+..++++++++ |+++.+|.........+....+ .+..++.+...
T Consensus 220 ~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~- 295 (351)
T cd08285 220 NGD--VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLC- 295 (351)
T ss_pred CCC--HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeec-
Confidence 654 77777777766 8999999999877889999999997 9999998765332233322111 24555655432
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCCc-eeeeeccccHHHHHHHHHcCCc--eeEEEec
Q 017336 318 NYKPRTDLPSVVDMYMNKQLELEKF-ITHRIPFSEINKAFEYMVKGEG--LRCIISM 371 (373)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~l~~~~~a~~~l~~~~~--~k~v~~~ 371 (373)
....+.++++++++.++++.+..+ ..+.|+++++++|++.+.+++. .|++|++
T Consensus 296 -~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 296 -PGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred -CCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 112357899999999999887433 4456999999999999988873 6998864
No 34
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4.1e-45 Score=341.78 Aligned_cols=321 Identities=18% Similarity=0.209 Sum_probs=250.2
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC----CCCCccccccceEEEEEeCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAGVVESVGEGVSD 78 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----~~~p~i~G~e~~G~V~~vG~~v~~ 78 (373)
..+|+++..+++ +++++++.|. +++||+|||.++|||++|++.+.|.+.. ..+|.++|||++|+|+++|.+ .
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 567888888876 9999999995 9999999999999999999999886532 357999999999999998864 7
Q ss_pred CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336 79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 158 (373)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 158 (373)
|++||||++.+..+|+ |..| +..|.|.+..+. |.. ..|+|+||+.+|+++++++|
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~vP 132 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR---SSG-------------------YDGFMQDYVFLPPDRLVKLP 132 (341)
T ss_pred cCCCCEEEECCCCCch-hccc--chhccCCCccee---Eec-------------------CCCceEEEEEEchHHeEECC
Confidence 9999999998888877 4355 456778754332 211 13699999999999999999
Q ss_pred CCCCchhhhhcccchhhhhhhhhh--ccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHHHhcCCc
Q 017336 159 PLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVT 235 (373)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlI~G~g~~G~~ai~la~~-~g~~~V~~~~~~~~~~~~~~~lg~~ 235 (373)
+++++++|+.+ .+++++|+++.. .+.++++++|||+|+|++|++++|+|++ +|..+|++++++++|++++++++.+
T Consensus 133 ~~l~~~~aa~~-~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFT-ELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhh-chHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 99999887755 478889988653 2456889999999999999999999986 6655899999999999999887665
Q ss_pred eeecCCCCCccHHHHHHHHcCC-CccEEEEccCC---hHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccce
Q 017336 236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERT 310 (373)
Q Consensus 236 ~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~ 310 (373)
..++ + + ... ++|+|||++|+ +..+..++++++++ |+++++|..... ..+.... +.++++
T Consensus 212 ~~~~--~----~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~ 275 (341)
T cd08237 212 YLID--D----I-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYP--VPINTRMVLEKGLT 275 (341)
T ss_pred eehh--h----h-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCC--cccCHHHHhhCceE
Confidence 3321 0 1 112 69999999994 46789999999997 999999975432 2333333 348999
Q ss_pred EEEEeccCCCCCCCHHHHHHHHHcC---CCCCCCceeeeeccc---cHHHHHHHHHcCCceeEEEecC
Q 017336 311 LKGTFFGNYKPRTDLPSVVDMYMNK---QLELEKFITHRIPFS---EINKAFEYMVKGEGLRCIISME 372 (373)
Q Consensus 311 i~g~~~~~~~~~~~~~~~~~~l~~~---~l~~~~~~~~~~~l~---~~~~a~~~l~~~~~~k~v~~~~ 372 (373)
+.|+..+. .+++.++++++.++ +..+.++++++|+|+ ++.+|++.+.++..+|++|+++
T Consensus 276 i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 276 LVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred EEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 99886432 24688999999998 345777899999986 5566665555544569999864
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=8.4e-44 Score=333.26 Aligned_cols=335 Identities=23% Similarity=0.366 Sum_probs=276.7
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++.+++. +++++++.|.|+++|++||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68898888765 99999999999999999999999999999998887665556789999999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
+|++.+..+|+.|.+|++++++.|.+.... ++ ...|+|+||+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL---GV-------------------HRDGGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCceE---EE-------------------ccCCcceeeEEechHHeEECcCCCCH
Confidence 999999999999999999999999754321 11 11369999999999999999999998
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~-~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+.++ +...+.++|. +....+++++++|||+|+|.+|++++|+|+. +|+..++++++++++.+.++++|++.++++.+
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4567788885 4677889999999999999999999999996 69977888999999999999999999988765
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKP 321 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~ 321 (373)
.+ +.+.+... +.++|++||++|++..+..++++++++ |+++.+|...... ......+ .+++++.++.. .
T Consensus 216 ~~--~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~----~ 285 (339)
T PRK10083 216 EP--LGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPS--EIVQQGITGKELSIFSSRL----N 285 (339)
T ss_pred cc--HHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCc--eecHHHHhhcceEEEEEec----C
Confidence 43 55555332 115689999999767899999999997 9999999764322 2222222 36677776543 2
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC--ceeEEEecCC
Q 017336 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE--GLRCIISMED 373 (373)
Q Consensus 322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~--~~k~v~~~~~ 373 (373)
.+.++++++++.++++.+.+++++.|+++++++|++.+.++. ..|+++++.|
T Consensus 286 ~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 286 ANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 356889999999998877656789999999999999988653 3699998764
No 36
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.8e-43 Score=332.11 Aligned_cols=340 Identities=31% Similarity=0.432 Sum_probs=284.4
Q ss_pred cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++..++. +++.+.+.|.| +++||+||+.++++|++|+..+.+.++..++|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 58899888776 89999999999 99999999999999999999888877666778999999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 160 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~ 160 (373)
|+|++.+.++|+.|.+|..|.+++|++..+..+.|. ...|+|++|++++++ +++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN-------------------RIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc-------------------CCCCeeeEEEEecchhCeEEECCCC
Confidence 999999999999999999999999987543321111 124699999999987 99999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
+++++++.++++++|||+++ ...+++++++|||.|+|.+|++++|+|+.+|..+|+++++++++.+.++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999986 67889999999998889999999999999996578888888999999999999888887
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336 241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 319 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 319 (373)
+..+ +.+.++..+++ ++|++||++++...+..++++|+++ |+++.+|..............+.++.++.++....
T Consensus 220 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (347)
T cd05278 220 KNGD--IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV- 295 (347)
T ss_pred Ccch--HHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-
Confidence 7654 77778877775 8999999999867889999999997 99999986543221112222234677777654322
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEe
Q 017336 320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIIS 370 (373)
Q Consensus 320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~~ 370 (373)
.+.+.++++++.++.+.+.+++...|+++++++|++.+..++. .|++++
T Consensus 296 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 296 --RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred --hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 3568889999999988765556788999999999999887765 487775
No 37
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.8e-43 Score=330.10 Aligned_cols=330 Identities=25% Similarity=0.462 Sum_probs=278.1
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++..++.++++++.+.|.++++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999998866799999999999999999999999999999998887655456688999999999999999999999999
Q ss_pred EEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 84 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 84 ~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
+|++.+ ...|+.|.+|..|+++.|.+.+.. |. ...|+|++|+.++++.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~---~~-------------------~~~g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT---GV-------------------TRDGGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCcc---Cc-------------------ccCCcceeEEEEchhheEeCCCCCC
Confidence 998754 567999999999999999876543 21 1136999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+.+++.+++.+.|||+++.. ..+.++++|||+|+|.+|++++++|+++|+ +|+++++++++++.++++|+++++++.+
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 99999999999999998754 589999999999999999999999999999 7999999999999999999998888766
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP 321 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~ 321 (373)
.+ +.+.+++. +++|+++|++|....+..++++++++ |+++.+|.... ...+.... +.+++++.++..+.
T Consensus 217 ~~--~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~--- 286 (333)
T cd08296 217 ED--VAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT--- 286 (333)
T ss_pred cc--HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---
Confidence 54 66666655 37999999998668899999999997 99999998652 23333332 34899999876432
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
..++..+++++.++.+.. ++ ..|+++++.+|++.+.+++. +|+|++
T Consensus 287 ~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 287 ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 235788888888886643 34 68999999999999998886 588774
No 38
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2e-43 Score=338.13 Aligned_cols=331 Identities=19% Similarity=0.221 Sum_probs=260.9
Q ss_pred cccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCccccccc-ccCCC-C-----CCCCccccccceEEEEEeCC
Q 017336 2 SSTAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQ-T-----PLFPRIFGHEAAGVVESVGE 74 (373)
Q Consensus 2 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~-~-----~~~p~i~G~e~~G~V~~vG~ 74 (373)
|.|||+++..++. ++++++|.|.|+++||+|||.++|+|++|++.+ .|... . ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 3789999988876 999999999999999999999999999999875 44321 1 24688999999999999999
Q ss_pred CCC-CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC-
Q 017336 75 GVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG- 152 (373)
Q Consensus 75 ~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~- 152 (373)
+++ .|++||||++.+...|+.|..|. + . |+. ..|+|+||+.++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~---~----------g~~-------------------~~G~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G---Y----------SYT-------------------YPGGLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C---c----------ccc-------------------CCCcceEEEEecHHh
Confidence 998 59999999999888898888772 1 0 111 13699999999987
Q ss_pred ---ceEeCCCCCCchhhhhc-c--cc--hhhhhhh-----hhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcC--CcEE
Q 017336 153 ---CVAKINPLAPLDKVCIL-S--CG--VSTGLGA-----TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAG--ASRI 216 (373)
Q Consensus 153 ---~~~~~p~~~~~~~aa~~-~--~~--~~ta~~~-----l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g--~~~V 216 (373)
.++++|+++++++++.+ + +. ..+|++. +.++++++++++|+|+|+ |++|++++|+|+.+| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 68999999999988754 2 22 1222222 124578899999999985 999999999999975 4579
Q ss_pred EEEcCChhHHHHHHhc--------CCc-eeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEE
Q 017336 217 IGVDRSSKRFEEAKKF--------GVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVA 286 (373)
Q Consensus 217 ~~~~~~~~~~~~~~~l--------g~~-~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~ 286 (373)
++++++++|++.++++ |++ .++++.+. .++.+.+++.+++ ++|++||++|++..+..++++++++ |++
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~ 284 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPATI-DDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL 284 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCcc-ccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence 9999999999999997 666 46665431 1277788888877 8999999999888999999999997 877
Q ss_pred EEEcCC-CCCceeeccchhh-cccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc
Q 017336 287 VLVGVP-SKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG 364 (373)
Q Consensus 287 v~~g~~-~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~ 364 (373)
+.++.. .......++...+ .+++++.|+..+. .++++++++++.++++++.++++++|+|+++++|++.+..+..
T Consensus 285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~ 361 (410)
T cd08238 285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPG 361 (410)
T ss_pred EEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCC
Confidence 766432 2121223333333 4889999976432 3468999999999999988889999999999999999994445
Q ss_pred eeEEEec
Q 017336 365 LRCIISM 371 (373)
Q Consensus 365 ~k~v~~~ 371 (373)
+|+++.+
T Consensus 362 gKvvl~~ 368 (410)
T cd08238 362 GKKLIYT 368 (410)
T ss_pred ceEEEEC
Confidence 6998876
No 39
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.3e-43 Score=327.12 Aligned_cols=303 Identities=20% Similarity=0.286 Sum_probs=238.7
Q ss_pred ccchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecC-cccccccccCCCC---CCCCccccccceEEEEEeCCCCCC
Q 017336 3 STAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLC-RTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD 78 (373)
Q Consensus 3 ~~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~ 78 (373)
+|||+++..++. +++++.+.|+|+++||+|||.+++|| ++|++.++|.++. ..+|.++|||++|+|+++|+++ .
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 478999887665 99999999999999999999999996 6999888886543 3579999999999999999998 5
Q ss_pred CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336 79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 158 (373)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 158 (373)
|++||||++. |..|..|.. | ..|+|+||+.++++.++++|
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~---------------~---------------------~~G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR---------------G---------------------LFGGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEe----Ccccccccc---------------c---------------------cCCcccceEEcCHHHceeCC
Confidence 9999999873 222322210 1 02699999999999999999
Q ss_pred CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336 159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238 (373)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi 238 (373)
++++++. +.+. .+.|||+++.. . ..+++++||+|+|++|++++|+|+.+|++.|++++.+++|++.+.++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9998764 4444 57899998644 3 34688999999999999999999999996677788788887766554 344
Q ss_pred cCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336 239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 318 (373)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 318 (373)
++.+. .+.++|+||||+|++..++.++++++++ |+++++|.......+++.. .+.+++++.++..+.
T Consensus 192 ~~~~~-----------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 258 (308)
T TIGR01202 192 DPEKD-----------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVP-AFMKEARLRIAAEWQ 258 (308)
T ss_pred Chhhc-----------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccch-hhhcceEEEEecccc
Confidence 43221 1237999999999977889999999997 9999999864332233222 234788888765432
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ceeEEEe
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIIS 370 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~k~v~~ 370 (373)
.+++++++++++++++++.+++++.|||+++++|++.+.++. ..|++|+
T Consensus 259 ---~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 259 ---PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ---hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 356999999999999998888999999999999999887655 4688874
No 40
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.1e-42 Score=327.14 Aligned_cols=336 Identities=25% Similarity=0.394 Sum_probs=278.0
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC---------CCCCccccccceEEEEEeCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---------PLFPRIFGHEAAGVVESVGE 74 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~~p~i~G~e~~G~V~~vG~ 74 (373)
|||+++.+++. +++++.+.|+++++||+||+.++++|++|+....|.... ..+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999987765 999999999999999999999999999999888775311 24677899999999999999
Q ss_pred CCC--CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC
Q 017336 75 GVS--DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG 152 (373)
Q Consensus 75 ~v~--~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~ 152 (373)
+++ +|++||+|+..+..+|+.|..|..+..+.|.... ..|... ...|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD---LYGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc---ceeecc-----------------CCCCcceeeEEcccc
Confidence 999 8999999999999999999999999999997432 122210 013699999999988
Q ss_pred -ceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336 153 -CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 231 (373)
Q Consensus 153 -~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~ 231 (373)
.++++|++++++.++.+ .+++|+|+++ +.+++.++++|||.|+|.+|++++++|+.+|+..++++++++++.+.+++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999998888 7899999986 77899999999997789999999999999998778889899999999999
Q ss_pred cCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccce
Q 017336 232 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERT 310 (373)
Q Consensus 232 lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~ 310 (373)
+|++.+++..+.+ +.+.+.+.+++ ++|++||++|+...+..++++++++ |+++.+|.......+........++++
T Consensus 218 ~g~~~v~~~~~~~--~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 294 (350)
T cd08256 218 FGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELD 294 (350)
T ss_pred cCCcEEecCCCcC--HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccE
Confidence 9998888776554 77778887776 8999999999767788999999997 999999865433222222221246777
Q ss_pred EEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336 311 LKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 369 (373)
Q Consensus 311 i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~ 369 (373)
+.++.... ..+.+++++++++.+.+.+++.+.|+++++++|++.+.+++. .|+++
T Consensus 295 i~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 295 VLGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 77765432 358889999999988765557899999999999999988774 47663
No 41
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.2e-42 Score=326.10 Aligned_cols=337 Identities=31% Similarity=0.427 Sum_probs=283.9
Q ss_pred cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++..++. +++++.+.|+| .++||+||++++++|++|+..+.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68888888776 99999999996 89999999999999999999988876555568899999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 160 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~ 160 (373)
|+|++.+...|+.|++|..++++.|+...+.. |. ...|+|++|+.++++ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------------~~~g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWIL--GN-------------------LIDGTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCccccc--cc-------------------ccCCeeeeEEEcccccCceEECCCC
Confidence 99999999999999999999999998643321 11 123699999999987 99999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
++..+++.+++.+++||.++.....+.++++|||.|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999877777889999999999889999999999999994488899899999999999999988887
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccC
Q 017336 241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN 318 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 318 (373)
.+.+ +.+.+.+.+.+ ++|++|||+|....+..+++.|+++ |+++.+|..... ..+.... +.+++++.+....
T Consensus 219 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~- 292 (345)
T cd08286 219 AKGD--AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD- 292 (345)
T ss_pred cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc-
Confidence 7654 77777777766 8999999999877889999999997 999999865422 3333333 4478888765322
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC---ceeEEEec
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE---GLRCIISM 371 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~---~~k~v~~~ 371 (373)
.+.+.++++++.++.+.+.+++++.|+++++++|++.+.+.. ..|++|++
T Consensus 293 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 ---TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred ---hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 135788899999998877666789999999999999988762 45998864
No 42
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.6e-42 Score=329.65 Aligned_cols=356 Identities=28% Similarity=0.391 Sum_probs=283.1
Q ss_pred cchhhhccCCCCeEEEEeecCCCC-CCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++.+++. +++++++.|.|. +++|+||+.++++|++|+..+.|.++..++|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999887654 999999999984 9999999999999999999998877666678999999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccC-cccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINP-VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINP 159 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~ 159 (373)
|+|++.+..+|+.|.+|..+..++|++..... +.|..... .....|...-.....|+|++|+.++++ .++++|+
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA---GAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccc---cccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 99999999999999999999999998654321 10100000 000000000000124799999999988 8999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
++++++++.+++.++|||+++ +.+.+.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.+++++...+++
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~ 235 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETIN 235 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEc
Confidence 999999999999999999987 7789999999999988999999999999999856999999999999999984445666
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCC---------------------hHhHHHHHHHhhcCCcEEEEEcCCCCCce
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGN---------------------IDNMISAFECVHDGWGVAVLVGVPSKDAV 297 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~---------------------~~~~~~~~~~l~~~~g~~v~~g~~~~~~~ 297 (373)
+...+ .+.+.+.+++.+ ++|++||++|+ ...+..++++++++ |+++.+|..... .
T Consensus 236 ~~~~~-~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~ 312 (386)
T cd08283 236 FEEVD-DVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-V 312 (386)
T ss_pred CCcch-HHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-c
Confidence 55431 267778788776 89999999975 24678899999997 999999876432 2
Q ss_pred eeccc-hhhcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEEe
Q 017336 298 FMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIIS 370 (373)
Q Consensus 298 ~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~k~v~~ 370 (373)
..... ..+.+++++.++... ..+.+.++++++.++++...+++++.|+++++++|++.+.+++ . +|++|+
T Consensus 313 ~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 313 NKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred CccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 22232 234478888876422 2346888999999998877666778999999999999988776 3 599885
No 43
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2.5e-42 Score=324.07 Aligned_cols=338 Identities=29% Similarity=0.425 Sum_probs=285.7
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++..++.++++.+.+.|.+.++||+||+.++++|++|+....|..+...+|.++|+|++|+|+.+|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999988888899999999999999999999999999999998888765556688999999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCCC
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA 161 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~~ 161 (373)
+|+..+..+|+.|.+|+.|..+.|++.+.. |+ .+.|+|++|+.+++. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQP---GF-------------------THPGSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCccc---cc-------------------CCCCcceeEEEcccccCceEECCCCC
Confidence 999888889999999999999999975432 21 123699999999974 999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~ 241 (373)
++++++.++..+.|||+++...+++.++++|+|+|+|.+|++++|+|+.+|+ .|+++.+++++.+.++++|++.+++.+
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999999999999998778889999999999999999999999999999 789998999999999999999898876
Q ss_pred C-CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce-eeccchhh-cccceEEEEeccC
Q 017336 242 E-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINV-LNERTLKGTFFGN 318 (373)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~ 318 (373)
. .+ +.+.+.....+++|++||++|+......++++++++ |+++.+|....... ..+....+ .++.++.++...
T Consensus 218 ~~~~--~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (345)
T cd08260 218 EVED--VAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM- 293 (345)
T ss_pred cchh--HHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC-
Confidence 5 33 667777766658999999999767888999999997 99999987643321 22333333 477787776532
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
..+.+++++++++++.+.+.+++.+.++++++++|++.+.+++. .|+|++
T Consensus 294 --~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 294 --PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred --CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 23468889999999988765557889999999999999988775 477654
No 44
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=2.1e-42 Score=325.19 Aligned_cols=336 Identities=27% Similarity=0.422 Sum_probs=281.3
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC------------CCCCCccccccceEEEEE
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ------------TPLFPRIFGHEAAGVVES 71 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~i~G~e~~G~V~~ 71 (373)
|||+++..++.++++.+++.|+++++||+|++.++++|++|+....+.++ ...+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 78999988888899999999999999999999999999999988776543 234567899999999999
Q ss_pred eCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec
Q 017336 72 VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 151 (373)
Q Consensus 72 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~ 151 (373)
+|++++.+++||+|++.+...|+.|.+|.++++++|...... |.. ..|+|++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL---GIF-------------------QDGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce---eee-------------------ccCcceeeEEecH
Confidence 999999999999999999999999999999999999763222 111 2369999999999
Q ss_pred CceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336 152 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 231 (373)
Q Consensus 152 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~ 231 (373)
+.++++|+++++.+++.+++.+.|||+++.....+.++++|||+|+|.+|++++|+|+.+|+++|+++++++++.+.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999987776667789999999889999999999999999778889899999999999
Q ss_pred cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceE
Q 017336 232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL 311 (373)
Q Consensus 232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i 311 (373)
+|++.+++..+.. +.+.+.+..++++|++||++|+...+..++++|+++ |+++.+|............. ..++.++
T Consensus 219 ~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i 294 (350)
T cd08240 219 AGADVVVNGSDPD--AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTI 294 (350)
T ss_pred hCCcEEecCCCcc--HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEE
Confidence 9998888765544 666677766658999999999768899999999997 99999987653322232222 2377888
Q ss_pred EEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 312 KGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 312 ~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
.++..... +++.++++++.++.+... ..+.|+++++++|++.+.+++. .|++++
T Consensus 295 ~~~~~~~~---~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 295 QGSYVGSL---EELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EEcccCCH---HHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 77654332 468889999999977643 5678999999999999987774 588775
No 45
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=8e-42 Score=319.97 Aligned_cols=332 Identities=29% Similarity=0.442 Sum_probs=281.5
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++..++.++++.+.+.|++++++|+|++.++++|++|+....|.++ ...+|.++|+|++|+|+++|+++..|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999998877799999999999999999999999999999998877553 345678999999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|++.+..+|+.|..|..|..++|.+..+. |+. ..|+|++|+.++++.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP---GIG-------------------TDGGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc---Ccc-------------------CCCcceeeEEecHHHeEECCCC
Confidence 999999999999999999999999999987765 321 1369999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhc-cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhcCCceee
Q 017336 161 APLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFV 238 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~lg~~~vi 238 (373)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++|+|+.+| . +|+++.+++++.+.++++|+++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~ 217 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVL 217 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEE
Confidence 99999999999999999987665 46888999999999889999999999999 6 788888889999999999998888
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEec
Q 017336 239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF 316 (373)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~ 316 (373)
+++.. +.+.+++.+++ ++|+++|++|+......++++|+++ |+++.+|.... ....... +.+++++.++..
T Consensus 218 ~~~~~---~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~ 290 (340)
T cd05284 218 NASDD---VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLW 290 (340)
T ss_pred cCCcc---HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEec
Confidence 76653 66778777776 8999999999877889999999997 99999987542 2222222 347888877653
Q ss_pred cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
. ..+.+.+++++++++.+.+ ..+.|+++++++|++.+.+++. +|+++.+
T Consensus 291 ~---~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 291 G---TRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred c---cHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 2 2346888999999998754 3568999999999999988875 4887653
No 46
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=9.4e-42 Score=322.69 Aligned_cols=360 Identities=33% Similarity=0.498 Sum_probs=287.9
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCC---CC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD---LE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~---~~ 80 (373)
|||+++..++.++++.+.++|.++++||+|++.++++|++|+....+..+. .+|.++|||++|+|+.+|++++. |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 689999888777899999999999999999999999999999988776543 56889999999999999999988 99
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccC-CCccccccCCcceeeEEEEecCceEeCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN-GEPVNHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~-g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
+||+|++.+..+|+.|.+|..+..++|.+..+....+-...+|...+... ++.++ ....|+|++|+.++++.++++|+
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-cccCCcceeEEEechhhEEECCC
Confidence 99999999999999999999999999997652211110001110000000 00000 01237999999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
++++.+++.++..++|||.++.....+.++++|||+|+|.+|++++++|+.+|+..|+++++++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999999888788899999999988999999999999999955888888999999999999998888
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 317 (373)
.++.+ +.+.++...++ ++|++||++++......++++|+++ |+++.+|.........+....+ .++.++.++..
T Consensus 239 ~~~~~--~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~- 314 (367)
T cd08263 239 AAKED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG- 314 (367)
T ss_pred CCccc--HHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC-
Confidence 77655 77778777765 8999999999854888999999997 9999998654322223333344 47777777432
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
....+.++++++++.++.+.+.+++++.|+++++.+|++.+.+++. +|+|+.
T Consensus 315 -~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 315 -ARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred -CCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1223468889999999988766567889999999999999988774 588763
No 47
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.3e-41 Score=318.72 Aligned_cols=337 Identities=29% Similarity=0.437 Sum_probs=274.0
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC---CCCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
||++++.++++.+++.+.+.|.|+++||+||++++++|++|+.++.+.. ....+|.++|||++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899998888779999999999999999999999999999998765521 1234678899999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|++.+.++|..|+.|..+++++|.+..+. | ....|+|++|+.+++++++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV---G-------------------VNRPGAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCccee---e-------------------ecCCCcceeeEEechHHeEECcCC
Confidence 999999999999999999999999999864322 1 112369999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
+++++++.+ ..+.++++++.. ...++++|+|.|+|.+|++++|+|+++|+++|+++++++++.+.++++|++.++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 998888754 456666655432 34589999999889999999999999999668888888999999999999998887
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336 241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 319 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 319 (373)
++.+ +.+.+++.+.+ ++|++|||.|+...+..++++++++ |+++.+|.......+.. ...+.+++++.++...
T Consensus 216 ~~~~--~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~-- 289 (341)
T PRK05396 216 AKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGR-- 289 (341)
T ss_pred cccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEcc--
Confidence 7655 77788877766 8999999999877889999999997 99999987653333332 2223477788776421
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEecC
Q 017336 320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 372 (373)
Q Consensus 320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~~ 372 (373)
...+.+..+++++.++ +.+.+++.+.|+++++++|++.+.+++.+|++++++
T Consensus 290 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 290 EMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred CccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 1223566788888888 545555789999999999999998776569998764
No 48
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=3.1e-41 Score=316.46 Aligned_cols=338 Identities=28% Similarity=0.403 Sum_probs=276.2
Q ss_pred cchhhhccCCCCeEEEEeecCCCC-CCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++..++ .++++++++|.|. ++||+|++.++++|+.|+....|.++ ..+|.++|+|++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 6888987765 4999999999985 99999999999999999988877554 3457889999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 160 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~ 160 (373)
|+|++.+..+|+.|.+|+.++.+.|++..+. |.. + .....|+|++|+.++++ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLF---GYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCccc---ccc---c------------cCCCCCceeEEEEcccccCceEECCCC
Confidence 9999999999999999999999999764322 110 0 00123699999999865 99999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
+++++++.+++++.|||+++. ...+.++++|||+|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999875 47889999999998899999999999999975788888889999999999975 3454
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEeccC
Q 017336 241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGN 318 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~ 318 (373)
+..+ +.+.+.+.+++ ++|++||++++......++++++++ |+++.+|...... ..... ..+.++.++.+..
T Consensus 219 ~~~~--~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~--- 291 (344)
T cd08284 219 EDAE--PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEE-FPFPGLDAYNKNLTLRFGR--- 291 (344)
T ss_pred CCcC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCC-ccccHHHHhhcCcEEEEec---
Confidence 4433 77778887776 8999999999877899999999997 9999999765221 12222 2244777776542
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 370 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~ 370 (373)
....+.+.++++++.++.+.+.+++.+.|+++++++|++.+.+++..|++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 2234578899999999988765567889999999999998887666787764
No 49
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=4.5e-41 Score=320.84 Aligned_cols=338 Identities=18% Similarity=0.230 Sum_probs=273.1
Q ss_pred cccchhhhcc--CCC---CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC----------CCCCCccccccce
Q 017336 2 SSTAAAVAWE--AGK---PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ----------TPLFPRIFGHEAA 66 (373)
Q Consensus 2 ~~~~a~~~~~--~~~---~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~i~G~e~~ 66 (373)
.+|||+++.. .+. .+++++++.|.++++||+|++.++++|++|+....+... ....+.++|||++
T Consensus 11 ~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~ 90 (393)
T cd08246 11 EKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDAS 90 (393)
T ss_pred hhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceE
Confidence 4689988752 232 378899999999999999999999999999987766411 1112358999999
Q ss_pred EEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeE
Q 017336 67 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEY 146 (373)
Q Consensus 67 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~ 146 (373)
|+|+++|++++.+++||+|++.+...|+.|..|.++..++|....+. |+. ...|+|++|
T Consensus 91 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~------------------~~~g~~a~y 149 (393)
T cd08246 91 GIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIW---GYE------------------TNYGSFAQF 149 (393)
T ss_pred EEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccc---ccc------------------CCCCcceeE
Confidence 99999999999999999999999999999999999999999764433 322 123699999
Q ss_pred EEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhc--cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336 147 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 223 (373)
Q Consensus 147 ~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~ 223 (373)
+++++.+++++|+++++++++.+++++.|||+++... +.+.++++|||+|+ |.+|++++++|+.+|+ +++++++++
T Consensus 150 ~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~ 228 (393)
T cd08246 150 ALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSE 228 (393)
T ss_pred EEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCH
Confidence 9999999999999999999999999999999987654 67899999999997 9999999999999999 677788899
Q ss_pred hHHHHHHhcCCceeecCCCCC--------------------ccHHHHHHHHcCC--CccEEEEccCChHhHHHHHHHhhc
Q 017336 224 KRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHD 281 (373)
Q Consensus 224 ~~~~~~~~lg~~~vi~~~~~~--------------------~~~~~~~~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~ 281 (373)
++++.++++|++.++++++.+ ..+.+.+.+.+++ ++|++||++|+ ..+..+++++++
T Consensus 229 ~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~~ 307 (393)
T cd08246 229 EKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCDR 307 (393)
T ss_pred HHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhcc
Confidence 999999999999888864421 1255667777776 69999999997 778899999999
Q ss_pred CCcEEEEEcCCCCCceeeccch-hhcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHH
Q 017336 282 GWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMV 360 (373)
Q Consensus 282 ~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~ 360 (373)
+ |+++.+|...... ...... .+.++.++.++.... .+.+.+++++++++.+.. .++++|+++++++|++.+.
T Consensus 308 ~-G~~v~~g~~~~~~-~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~ 380 (393)
T cd08246 308 G-GMVVICAGTTGYN-HTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMH 380 (393)
T ss_pred C-CEEEEEcccCCCC-CCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHH
Confidence 7 9999998654221 222222 234677777765433 246888999999997763 3778999999999999998
Q ss_pred cC-Cc-eeEEE
Q 017336 361 KG-EG-LRCII 369 (373)
Q Consensus 361 ~~-~~-~k~v~ 369 (373)
++ +. +|+++
T Consensus 381 ~~~~~~gkvvv 391 (393)
T cd08246 381 RNQHHVGNMAV 391 (393)
T ss_pred hCccccceEEE
Confidence 87 54 47665
No 50
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.1e-40 Score=311.99 Aligned_cols=333 Identities=32% Similarity=0.550 Sum_probs=278.8
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++..++. +++.+.+.|.++++||+|+|.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68888887765 89999999999999999999999999999998887665556688999999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
+|+..+..+|+.|..|+.++.|.|...+.. + +...|+|++|+.++++ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQVL---G-------------------VHRDGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCee---e-------------------ecCCCcceeEEEechh-eEECCCCCCH
Confidence 999999999999999999999999644322 1 1123699999999999 9999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~ 243 (373)
++++++ ..+.++++++ ....+.++++|||+|+|.+|.+++|+|+.+|+ +|+++.+++++.+.++++|+++++++.+.
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~ 213 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDE 213 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCccc
Confidence 998877 4678888875 77889999999999889999999999999999 79999889999999999999999887765
Q ss_pred CccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCC
Q 017336 244 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP 321 (373)
Q Consensus 244 ~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~ 321 (373)
+ +.+.+.+.+++ ++|++||++|+...+..++++|+++ |+++.+|..... .......+. +++++.++. ...
T Consensus 214 ~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~---~~~ 285 (337)
T cd08261 214 D--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGP--VTFPDPEFHKKELTILGSR---NAT 285 (337)
T ss_pred C--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCC--CccCHHHHHhCCCEEEEec---cCC
Confidence 4 77888888776 7999999998878889999999997 999999866422 222222333 667776653 223
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEEec
Q 017336 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCIISM 371 (373)
Q Consensus 322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~k~v~~~ 371 (373)
.+.++++++++.++.+.+.+.+...++++++++|++.+.+++ . .|+++++
T Consensus 286 ~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 286 REDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 346888999999998876434778999999999999998873 4 5888864
No 51
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=9.3e-41 Score=315.57 Aligned_cols=336 Identities=26% Similarity=0.431 Sum_probs=266.9
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
++++++..+.. +++++.+.|.|+++||+||+.++++|++|+....+... ...+|.++|||++|+|+++|++++.|+
T Consensus 18 ~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (364)
T PLN02702 18 NMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLV 96 (364)
T ss_pred cceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCC
Confidence 55555565544 88889999999999999999999999999988765321 123578899999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|++.+..+|++|.+|.+|.++.|++..+. +.. ...|+|++|+.++++.++++|++
T Consensus 97 ~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~------------------~~~g~~~~y~~v~~~~~~~~P~~ 155 (364)
T PLN02702 97 VGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF---ATP------------------PVHGSLANQVVHPADLCFKLPEN 155 (364)
T ss_pred CCCEEEEcCCCCCCCCcchhCcCcccCCCcccc---CCC------------------CCCCcccceEEcchHHeEECCCC
Confidence 999999999999999999999999999762211 100 01369999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
+++.+++.. .++.++|+++ ....+.++++|||+|+|++|++++|+|+++|+..|+++++++++.+.++++|++.++++
T Consensus 156 l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 233 (364)
T PLN02702 156 VSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLV 233 (364)
T ss_pred CCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEec
Confidence 999888752 2445577775 67889999999999989999999999999999778888889999999999999887765
Q ss_pred CCCCccHHHHHHHH---cCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEec
Q 017336 241 SEHDRPIQEVIAEM---TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFF 316 (373)
Q Consensus 241 ~~~~~~~~~~~~~~---~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~ 316 (373)
.....++.+.+... +++++|++||++|++..+..++++++++ |+++.+|..... ...... ...+++++.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 234 STNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVGVFR 310 (364)
T ss_pred CcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEEecc
Confidence 43222366665544 3348999999999768899999999997 999999865422 222222 2347888887653
Q ss_pred cCCCCCCCHHHHHHHHHcCCCCCCCceeeeecc--ccHHHHHHHHHcCCc-eeEEEe
Q 017336 317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPF--SEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
. ...+..++++++++++.+.+++++.|++ +++++|++.+.+++. .|++|.
T Consensus 311 ~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 311 Y----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred C----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 2 2367889999999988766667888666 799999999887764 588875
No 52
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.1e-41 Score=313.09 Aligned_cols=309 Identities=19% Similarity=0.266 Sum_probs=251.4
Q ss_pred cchhhhccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCC
Q 017336 4 TAAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS 77 (373)
Q Consensus 4 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~ 77 (373)
|||+++.+++.| +++.+.+.|.|+++||+||+.++++|++|+....|.++. ..+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 689998888753 788899999999999999999999999999988886542 45688999999999999999999
Q ss_pred C-CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEe
Q 017336 78 D-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK 156 (373)
Q Consensus 78 ~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~ 156 (373)
. |++||+|+..+. ..|+|+||+.++++.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------------------------~~g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------------------------SYGTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------------------------CCCcchheeeecHHHeEE
Confidence 6 999999985410 015999999999999999
Q ss_pred CCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEE-C-CCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 017336 157 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 234 (373)
Q Consensus 157 ~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G-~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~ 234 (373)
+|+++++++++++++.++|||.. ...... ++++++|+ | +|++|++++|+|+.+|+ +|+++++++++++.++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999999888889999754 455555 56667665 4 59999999999999999 79999899999999999999
Q ss_pred ceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEE
Q 017336 235 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLK 312 (373)
Q Consensus 235 ~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~ 312 (373)
++++++.+.+ +.+.+++.+.+ ++|++||++|+ ......+++++++ |+++.+|.........++.. .+.+++++.
T Consensus 190 ~~~i~~~~~~--~~~~v~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08291 190 EYVLNSSDPD--FLEDLKELIAKLNATIFFDAVGG-GLTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE 265 (324)
T ss_pred cEEEECCCcc--HHHHHHHHhCCCCCcEEEECCCc-HHHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence 9999877655 88888888876 89999999998 5567789999997 99999997543321112222 244888998
Q ss_pred EEeccCCCC---CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 313 GTFFGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 313 g~~~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
++....+.. .+.+.+++++++ +.+ +++++++|+|+++++|++.+.+++. +|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 266 GFWLTTWLQKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEEHHHhhcccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 887654322 234677778876 654 4568899999999999999988764 588763
No 53
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.7e-40 Score=310.05 Aligned_cols=336 Identities=29% Similarity=0.482 Sum_probs=277.4
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++.+++. +++++.+.|++.+++|+|+++++++|+.|+....+.++....|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68898887765 89999999999999999999999999999998877554344577899999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCc-----eEeCC
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-----VAKIN 158 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~-----~~~~p 158 (373)
+|++.++.+|++|++|..++.++|...... |. ...|+|++|+.+++++ ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF---GN-------------------LYDGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee---cc-------------------CCCCcceeeEEecccccccccEEECC
Confidence 999999999999999999999999865432 11 1236999999999998 99999
Q ss_pred CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336 159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238 (373)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi 238 (373)
+++++.+++.+ ..+.+||+++. ...+.++++|||+|+|.+|++++|+|++.|++.|+++++++++.+.++++|++.++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999998776 68899999875 45899999999998899999999999999994488888999999999999998888
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEec
Q 017336 239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF 316 (373)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 316 (373)
++++.+ +.+.+.+.+++ ++|+++|++++...+..++++++++ |+++.+|..............+ .+++.+.++..
T Consensus 216 ~~~~~~--~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 292 (343)
T cd08235 216 DAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA 292 (343)
T ss_pred cCCccC--HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence 877655 77788877776 7999999999867889999999997 9999998654322222222222 36667766543
Q ss_pred cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336 317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 370 (373)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~ 370 (373)
.. .+.++.++++++++.+.+.+.+...|+++++.+|++.+.+++..|++++
T Consensus 293 ~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi~ 343 (343)
T cd08235 293 AS---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVIT 343 (343)
T ss_pred CC---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEeC
Confidence 22 3468889999999988754457788999999999999988774487764
No 54
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.1e-40 Score=314.11 Aligned_cols=346 Identities=25% Similarity=0.345 Sum_probs=273.3
Q ss_pred cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
||++++..++ +++++++++|.+ +++||+|||.++++|++|++...|..+ ..+|.++|||++|+|+++|+++..+++|
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 5888887766 499999999996 899999999999999999999887655 3468899999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 160 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~ 160 (373)
|+|++.+..+|+.|..|..++++.|.+.... ..|.. +...+ .....|+|++|+.++.. .++++|++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~-~~~~~-------~~~~~----~~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG-RAGGA-------YGYVD----MGPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc-ccccc-------ccccc----cCCCCCeeeeEEEeecccCcEEECCCC
Confidence 9999999999999999999999999763211 00000 00000 00013699999999976 89999999
Q ss_pred CCch---hhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336 161 APLD---KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237 (373)
Q Consensus 161 ~~~~---~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v 237 (373)
++++ .++.++..++|||+++ ..+.+.++++|||.|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|+. .
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~ 224 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-P 224 (375)
T ss_pred CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-E
Confidence 9998 5677888899999987 778899999999998899999999999999976788899999999999999984 4
Q ss_pred ecCCCCCccHHHHHHHHcCCCccEEEEccCChH-----------hHHHHHHHhhcCCcEEEEEcCCCCCc----------
Q 017336 238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID-----------NMISAFECVHDGWGVAVLVGVPSKDA---------- 296 (373)
Q Consensus 238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~~g~~v~~g~~~~~~---------- 296 (373)
+++.+.+ +.+.+.+.+++++|+++||+|+.. .+..++++++++ |+++.+|......
T Consensus 225 v~~~~~~--~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~ 301 (375)
T cd08282 225 IDFSDGD--PVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQ 301 (375)
T ss_pred eccCccc--HHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccC
Confidence 5555433 777777776668999999998742 478999999997 9999888643211
Q ss_pred -eeeccchhh-cccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 297 -VFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 297 -~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
...+....+ .++..+.+... ...+.+.+++++++++++.+..++.+.|+++++++|++.+.+++..|+++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 302 GELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred ccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 011222222 35555555432 1234688899999999887655688999999999999999888755888753
No 55
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1.8e-40 Score=308.07 Aligned_cols=317 Identities=26% Similarity=0.398 Sum_probs=261.3
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++.+++ ++++++++.|+++++||+||+.++++|++|+....|.++ +|.++|||++|+|+++|++ +++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 6889988765 599999999999999999999999999999998877543 5788999999999999998 68999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
+|...+..+|+.|.+|..+.++.|...... +.. ...|+|++|+++++++++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTVL---GIV------------------DRDGAFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCccc---Ccc------------------CCCCceEEEEEechHHeEECcCCCCH
Confidence 999999999999999999999999865433 211 01359999999999999999999998
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~ 243 (373)
++++.+ ..+.++|. +.+...+.++++|||+|+|.+|++++|+|+.+|+ +|++++.++++.+.++++|++.++++...
T Consensus 133 ~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~ 209 (319)
T cd08242 133 EQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE 209 (319)
T ss_pred HHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc
Confidence 888764 34556665 4577889999999999989999999999999999 69999889999999999999887765331
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPR 322 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~ 322 (373)
..++++|++||++|+...+..++++++++ |+++..+.......+ .... +.++.++.++..+
T Consensus 210 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~----- 271 (319)
T cd08242 210 ----------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASF--DLTKAVVNEITLVGSRCG----- 271 (319)
T ss_pred ----------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCcc--CHHHheecceEEEEEecc-----
Confidence 12238999999999867889999999997 999987764322222 2222 3477788776532
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 370 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~ 370 (373)
.++++++++.++++++.+++++.|+++++++|++.+.++...|++++
T Consensus 272 -~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~ 318 (319)
T cd08242 272 -PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR 318 (319)
T ss_pred -cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence 38889999999998766668899999999999999987765688876
No 56
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.2e-40 Score=310.32 Aligned_cols=325 Identities=22% Similarity=0.314 Sum_probs=261.4
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-----------CCCCCccccccceEEEEEe
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV 72 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~i~G~e~~G~V~~v 72 (373)
|||+++..+ ++++++++.|+++++||+|++.++++|+.|+....|... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689988766 599999999999999999999999999999988876221 2235788999999999999
Q ss_pred CCCCCC-CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec
Q 017336 73 GEGVSD-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 151 (373)
Q Consensus 73 G~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~ 151 (373)
|++++. |++||+|++.+...|+.|+.|..|..+ ...|+|+||+.+++
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------------------------~~~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------------------------EAPGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------------------------CCCCceeeeEEech
Confidence 999987 999999999999999999999432110 01369999999999
Q ss_pred CceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336 152 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 231 (373)
Q Consensus 152 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~ 231 (373)
+.++++|+++++++++ ++.++++||++ ...++++++++|||+|+|.+|.+++|+|+.+|++.++++++++++.+.+++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999998876 56688899998 578899999999999889999999999999999768888889999999999
Q ss_pred cCCceeecCCCCCc--cHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhccc
Q 017336 232 FGVTDFVNTSEHDR--PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNE 308 (373)
Q Consensus 232 lg~~~vi~~~~~~~--~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 308 (373)
+|++.+++++..+. .+. .+.....+ ++|++||++|+...+..++++++++ |+++.+|.......+... ..+.++
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~ 281 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEPA-LAIRKE 281 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCHH-HHhhcc
Confidence 99988888765431 122 23344444 8999999998855788899999997 999999876422222111 113366
Q ss_pred ceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 309 RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 309 ~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
.++.++... ..+.+.+++++++++.+.+.+++.+.|+++++++|++.+.+++. .|++++
T Consensus 282 ~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 282 LTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred eEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 666654321 12368889999999998876667899999999999999988775 487763
No 57
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3.1e-40 Score=313.87 Aligned_cols=327 Identities=28% Similarity=0.413 Sum_probs=265.2
Q ss_pred CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC------C-CCCCCccccccceEEEEEeCCCCCCCCCCCEEee
Q 017336 15 PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG------Q-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP 87 (373)
Q Consensus 15 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 87 (373)
++++++++.|+++++||+|++.++++|++|+..+.+.. + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus 38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 117 (384)
T cd08265 38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA 117 (384)
T ss_pred CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence 49999999999999999999999999999998776321 1 1346789999999999999999999999999999
Q ss_pred cCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC------
Q 017336 88 VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA------ 161 (373)
Q Consensus 88 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~------ 161 (373)
.+..+|+.|+.|..++.+.|.+.... |+. ..|+|++|+.++++.++++|+++
T Consensus 118 ~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~v~v~~~~~~~lP~~~~~~~~~ 175 (384)
T cd08265 118 EEMMWCGMCRACRSGSPNHCKNLKEL---GFS-------------------ADGAFAEYIAVNARYAWEINELREIYSED 175 (384)
T ss_pred CCCCCCCCChhhhCcCcccCCCccee---eec-------------------CCCcceeeEEechHHeEECCccccccccC
Confidence 99999999999999999999853322 211 13699999999999999999864
Q ss_pred -Cchhhhhcccchhhhhhhhhhc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 162 -PLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 162 -~~~~aa~~~~~~~ta~~~l~~~-~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+.+ +++++.++++||+++... .+++++++|||+|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|++.+++
T Consensus 176 ~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~ 254 (384)
T cd08265 176 KAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFN 254 (384)
T ss_pred CCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEc
Confidence 344 556667889999987665 68999999999988999999999999999877999988899999999999998887
Q ss_pred CCCC-CccHHHHHHHHcCC-CccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEe
Q 017336 240 TSEH-DRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 315 (373)
Q Consensus 240 ~~~~-~~~~~~~~~~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 315 (373)
+.+. ...+.+.+.+.+++ ++|+|+|++|++ ..+..++++|+++ |+++.+|..... .......+ .+..++.++.
T Consensus 255 ~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~l~~~~ 331 (384)
T cd08265 255 PTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATT--VPLHLEVLQVRRAQIVGAQ 331 (384)
T ss_pred ccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCC--CcccHHHHhhCceEEEEee
Confidence 7643 12377888888877 899999999873 4778999999997 999999865432 22222222 3566777664
Q ss_pred ccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336 316 FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 369 (373)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~ 369 (373)
-. .....+.+++++++++.+.+.+++++.|+++++++|++.+.++...|+++
T Consensus 332 ~~--~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 332 GH--SGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred cc--CCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 21 12346889999999998876556788999999999999977665567765
No 58
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.7e-40 Score=308.14 Aligned_cols=336 Identities=30% Similarity=0.443 Sum_probs=271.2
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC---CCCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++..++..+++.+.+.|.|+++|++||+.++++|+.|+..+.+.. ....+|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6899988877679999999999999999999999999999988754321 2234577899999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|+..+.++|+.|.+|..+++|+|.... +.|. .+.|+|++|++++++.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK---ILGV-------------------DTDGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc---eEec-------------------cCCCcceEEEEechHHcEECcCC
Confidence 9999999999999999999999999997532 2121 12369999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
++.+.+ +++..+.++++++. ....++++|||.|+|.+|++++|+|+.+|+.+|++++++++|.+.++++|++.+++.
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 988544 56667788887654 455789999999889999999999999998668888888999999999999888876
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336 241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 319 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 319 (373)
...+ +. .+.+.+++ ++|++||++|+......++++|+++ |+++.+|.......+.+....+.+++.+.+... .
T Consensus 216 ~~~~--~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 289 (341)
T cd05281 216 REED--VV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITG--R 289 (341)
T ss_pred cccc--HH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEec--C
Confidence 5544 66 67777776 8999999999877889999999997 999999865432222222223346777766542 1
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336 320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 370 (373)
Q Consensus 320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~ 370 (373)
...+.+.+++++++++.+.+.+++...++++++++|++.+.+++.+|++++
T Consensus 290 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~ 340 (341)
T cd05281 290 KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLY 340 (341)
T ss_pred CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEec
Confidence 223457789999999988766667788999999999999988775588875
No 59
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-40 Score=309.90 Aligned_cols=330 Identities=24% Similarity=0.376 Sum_probs=274.5
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++..+++++++++.+.|.++++|++||+.++++|++|+....|..+..++|.++|||++|+|+.+|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 68999999888899999999999999999999999999999988877666566788999999999999999998899999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
+|++.+..+|+.|.+|..+.++.|.+.... |. ...|+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY---GE-------------------ELDGFFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCcccccc---cc-------------------ccCceeeeeeecchhceEECCCCCCH
Confidence 999998899999999999999999875432 21 11369999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
.+++.+++.+.+||+++... .+.++++|||+|+ |.+|++++|+|+++|+ +|+++++++++.+.++++ ++.+++..
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987655 8899999999998 8999999999999999 788888999999999888 76666554
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEeccCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFGNYKP 321 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~ 321 (373)
+ +.+.+++. +++|+++||+|+ .....++++++++ |+++.+|.......+.... ..+.+++++.+... ..
T Consensus 215 -~--~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 284 (334)
T PRK13771 215 -K--FSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---AT 284 (334)
T ss_pred -h--HHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CC
Confidence 2 55556554 379999999998 5788999999997 9999999754322211111 11347778877642 22
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
.+++.++++++.++.+. +.+.+.|+++++++|++.+.++.. .|+++++
T Consensus 285 ~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 285 KRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 34688899999999775 347789999999999999987664 5888764
No 60
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=4.7e-40 Score=307.56 Aligned_cols=334 Identities=28% Similarity=0.437 Sum_probs=279.3
Q ss_pred cchhhhccCCCC-eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCCC
Q 017336 4 TAAAVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 4 ~~a~~~~~~~~~-~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
|||+++..++++ +.+.+.+.|.+++++|+|++.++++|+.|+....+..+ ...+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 689999999987 68888899999999999999999999999998877654 3456789999999999999999999999
Q ss_pred CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
||+|++.+..+|+.|.+|+.++.+.|....+. |+. ..|+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP---GLG-------------------IDGGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCcc---ccc-------------------cCCcceeeEEechHHeEECCCCC
Confidence 99999999999999999999999999654433 221 13699999999999999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~ 241 (373)
++.+++.++.++.|||+++.....+.++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999998888889999999999889999999999999999 799999999999999999998888766
Q ss_pred CCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC
Q 017336 242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 320 (373)
Q Consensus 242 ~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 320 (373)
+.. +.+.+ ..+.+ ++|+++||+|....+..++++|+++ |+++.+|.......+... ..+.++.++.++...
T Consensus 218 ~~~--~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 289 (338)
T cd08254 218 DDS--PKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLS-DLIARELRIIGSFGG--- 289 (338)
T ss_pred CcC--HHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCHH-HHhhCccEEEEeccC---
Confidence 544 55555 44444 8999999998878899999999997 999999875432222221 123377777775432
Q ss_pred CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
..+.+..+++++.++.+.+. .+.+++++++++++.+.+++. .|+++++
T Consensus 290 ~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 290 TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 23468889999999987654 578999999999999988875 4888764
No 61
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.7e-40 Score=308.64 Aligned_cols=334 Identities=28% Similarity=0.410 Sum_probs=275.2
Q ss_pred cchhhhccCCCCeEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++..++. +++.+.+.|.| +++||+||+.++++|++|+....|..+. ..|.++|||++|+|+++|++++.+++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 68999887665 99999999996 9999999999999999999888775542 457899999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL 160 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p~~ 160 (373)
|+|++.+..+|+.|.+|..++.+.|.+..+. |. ...|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFW---GA-------------------FVDGGQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCcc---cC-------------------CCCCceEEEEEcchhhCceEECCCC
Confidence 9999867788999999999999999864322 21 123699999999975 99999999
Q ss_pred CCchhhh-----hcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336 161 APLDKVC-----ILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235 (373)
Q Consensus 161 ~~~~~aa-----~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~ 235 (373)
++++.+. .+...+++||+++ ..+.+.++++|+|.|+|.+|++++|+|+++|+..++++++++++.+.++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9872221 2235688899886 467899999999998899999999999999996689998888899999999999
Q ss_pred eeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEE
Q 017336 236 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKG 313 (373)
Q Consensus 236 ~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g 313 (373)
.++++.... +.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|..... ..+.. ..+.+++++.+
T Consensus 216 ~v~~~~~~~--~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~ 290 (345)
T cd08287 216 DIVAERGEE--AVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG--VELDVRELFFRNVGLAG 290 (345)
T ss_pred eEecCCccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCCC--CccCHHHHHhcceEEEE
Confidence 999887654 77788887776 8999999999878899999999997 999999876522 22333 33558888877
Q ss_pred EeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEe
Q 017336 314 TFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIIS 370 (373)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~ 370 (373)
.... ..+.+.++++++.++.+.+.+++++.++++++++|++.+.+.+..|++|+
T Consensus 291 ~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 344 (345)
T cd08287 291 GPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR 344 (345)
T ss_pred ecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence 5321 23468889999999988765567899999999999999888776799885
No 62
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.4e-40 Score=307.97 Aligned_cols=334 Identities=29% Similarity=0.496 Sum_probs=269.2
Q ss_pred hhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccC-CC--CCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 6 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 6 a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|+++..++. +++++.+.|.|.++||+|+|.++++|+.|+..+.+. .. ...+|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 355666654 899999999999999999999999999998765321 11 12357789999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|++.+..+|+.|++|+.|.+++|.+..+. +.. ...|+|++|+.++++.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATP------------------PVDGTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccc------------------cCCCceeeeEEecHHHcEECcCCCC
Confidence 9999999999999999999999999753221 100 0136999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
+++++.+ .++.+|++++ +.+.++++++|||.|+|.+|++++|+|+.+|+++|+++.+++++.+.++++|++.++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9998876 4788999885 7899999999999988999999999999999955899989999999999999999888765
Q ss_pred CCc-cHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC
Q 017336 243 HDR-PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 320 (373)
Q Consensus 243 ~~~-~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 320 (373)
.+. .+.+.+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|.......+.+. ....+++.+.++...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 291 (343)
T cd05285 217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY--- 291 (343)
T ss_pred ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC---
Confidence 441 136667777776 7999999999866889999999997 999999865432222221 122366777665422
Q ss_pred CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-c-eeEEE
Q 017336 321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-G-LRCII 369 (373)
Q Consensus 321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~-~k~v~ 369 (373)
.+.+.++++++.++.+.+.+.+.+.|+++++.+|++.+.+++ . +|++|
T Consensus 292 -~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 -ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred -hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 246888999999998765555788999999999999998875 3 68887
No 63
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=4e-40 Score=314.57 Aligned_cols=339 Identities=19% Similarity=0.251 Sum_probs=273.7
Q ss_pred ccchhhhcc--CCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC----------CCCCCC-ccccccce
Q 017336 3 STAAAVAWE--AGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG----------QTPLFP-RIFGHEAA 66 (373)
Q Consensus 3 ~~~a~~~~~--~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----------~~~~~p-~i~G~e~~ 66 (373)
+|||+++.. +++| +++.+.+.|.|+++||+|++.++++|++|++...+.. .....| .++|||++
T Consensus 7 ~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~ 86 (398)
T TIGR01751 7 TMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDAS 86 (398)
T ss_pred hhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceE
Confidence 599999965 4543 8899999999999999999999999999987654421 111223 37999999
Q ss_pred EEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeE
Q 017336 67 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEY 146 (373)
Q Consensus 67 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~ 146 (373)
|+|+++|++++.|++||+|++.+..+|++|++|.+++.+.|....+. |.. ...|+|+||
T Consensus 87 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~------------------~~~g~~ae~ 145 (398)
T TIGR01751 87 GVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW---GYE------------------TNFGSFAEF 145 (398)
T ss_pred EEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc---ccc------------------CCCccceEE
Confidence 99999999999999999999999999999999999999999754322 211 123699999
Q ss_pred EEEecCceEeCCCCCCchhhhhcccchhhhhhhhhh--ccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336 147 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 223 (373)
Q Consensus 147 ~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~--~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~ 223 (373)
+.++++.++++|+++++++++.+.+.+.|||+++.. .+.+.++++|||+|+ |.+|++++|+|+.+|+ +++++++++
T Consensus 146 ~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~ 224 (398)
T TIGR01751 146 ALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSP 224 (398)
T ss_pred EEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCH
Confidence 999999999999999999999999999999998654 477899999999998 9999999999999999 677787889
Q ss_pred hHHHHHHhcCCceeecCCCCC--------------------ccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcC
Q 017336 224 KRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDG 282 (373)
Q Consensus 224 ~~~~~~~~lg~~~vi~~~~~~--------------------~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~ 282 (373)
++.+.++++|++.++++++.+ ..+.+.+.+.+++ ++|++|||+|. ..+..++++++++
T Consensus 225 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~~~ 303 (398)
T TIGR01751 225 EKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCRRG 303 (398)
T ss_pred HHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhccC
Confidence 999999999999998865421 1245567777776 89999999997 7788999999997
Q ss_pred CcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHc
Q 017336 283 WGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK 361 (373)
Q Consensus 283 ~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~ 361 (373)
|+++.+|..... ........ +.++.++.++.+.. .++++++++++.++++.. .+++.+++++++++++.+.+
T Consensus 304 -G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~ 376 (398)
T TIGR01751 304 -GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHR 376 (398)
T ss_pred -CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHc
Confidence 999999876532 12222222 23666777765432 234778899999997763 37899999999999999988
Q ss_pred CCc-eeEEEec
Q 017336 362 GEG-LRCIISM 371 (373)
Q Consensus 362 ~~~-~k~v~~~ 371 (373)
++. +|+++++
T Consensus 377 ~~~~gkvvv~~ 387 (398)
T TIGR01751 377 NHHQGNVAVLV 387 (398)
T ss_pred CCCCceEEEEe
Confidence 775 5888876
No 64
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=3.8e-40 Score=308.24 Aligned_cols=334 Identities=25% Similarity=0.418 Sum_probs=272.9
Q ss_pred chhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 017336 5 AAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 84 (373)
Q Consensus 5 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~ 84 (373)
|+++.+..+..+++.+++.|+|+++|++||+.++++|++|+....+......+|.++|||++|+|+++|++++.|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 46677777777999999999999999999999999999999988876655567889999999999999999999999999
Q ss_pred Ee-ecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 85 VL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 85 V~-~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
|+ ......|++|++|+++..+.|....+.. .|. ...| ....|+|+||+.++++.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~-----~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGK---------YPDG-----TITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcc-ccc---------ccCC-----CcCCCcceeEEEechhheEECCCCCCH
Confidence 97 5556689999999999999997644321 010 0000 112469999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~ 243 (373)
++++.+++.+.|||+++.. ..+.++++++|.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++....
T Consensus 146 ~~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~ 223 (337)
T cd05283 146 AAAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDP 223 (337)
T ss_pred HHhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcch
Confidence 9999999999999998644 568999999998889999999999999999 89999999999999999999888876543
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPR 322 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~ 322 (373)
+ +.. ...+++|++|||+|+......++++++++ |+++.+|...... .++... +.++.++.++.... .
T Consensus 224 ~--~~~----~~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~ 291 (337)
T cd05283 224 E--AMK----KAAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---R 291 (337)
T ss_pred h--hhh----hccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---H
Confidence 2 221 12348999999999855689999999997 9999998764322 233333 34888998877543 2
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
++++.+++++.++++.+ . .+.|+++++++|++.+.+++. +|+|++
T Consensus 292 ~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 292 KETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 46888999999998753 2 478999999999999998885 588764
No 65
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.9e-40 Score=308.07 Aligned_cols=310 Identities=19% Similarity=0.221 Sum_probs=246.5
Q ss_pred cchhhhccCCC------CeEEEEe---ecCC-CCCCeEEEEEeeeecCcccccccccCCCCCCCCccccc--cceEEEEE
Q 017336 4 TAAAVAWEAGK------PLIIQDV---EVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH--EAAGVVES 71 (373)
Q Consensus 4 ~~a~~~~~~~~------~~~~~~~---~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~--e~~G~V~~ 71 (373)
.|.+++.+..+ .+++++. +.|. +++||||||+.++++|+.|...+.+......+|.++|+ |++|+|..
T Consensus 9 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~ 88 (348)
T PLN03154 9 NKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKV 88 (348)
T ss_pred ceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEE
Confidence 45566644332 1777764 6663 48999999999999999987654432322345889998 88999999
Q ss_pred eCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec
Q 017336 72 VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 151 (373)
Q Consensus 72 vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~ 151 (373)
+|++++.|++||+|+.. |+|+||+.+++
T Consensus 89 vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~~v~~ 116 (348)
T PLN03154 89 VDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYSLIRS 116 (348)
T ss_pred EecCCCCCCCCCEEEec----------------------------------------------------CCcEEEEEEec
Confidence 99999999999999832 48999999987
Q ss_pred Cc--eEe--CCCCCCch-hhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336 152 GC--VAK--INPLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR 225 (373)
Q Consensus 152 ~~--~~~--~p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~ 225 (373)
+. +.+ +|++++++ ++++++++++|||+++.+.+.++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++
T Consensus 117 ~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k 195 (348)
T PLN03154 117 SDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQK 195 (348)
T ss_pred cccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHH
Confidence 53 544 59999986 688899999999999878889999999999998 9999999999999999 79999899999
Q ss_pred HHHHH-hcCCceeecCCCC-CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc-ee---e
Q 017336 226 FEEAK-KFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VF---M 299 (373)
Q Consensus 226 ~~~~~-~lg~~~vi~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~-~~---~ 299 (373)
++.++ ++|++.++++.+. + +.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...... .. .
T Consensus 196 ~~~~~~~lGa~~vi~~~~~~~--~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~ 271 (348)
T PLN03154 196 VDLLKNKLGFDEAFNYKEEPD--LDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQGI 271 (348)
T ss_pred HHHHHHhcCCCEEEECCCccc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCCCc
Confidence 99987 7999999987643 3 7777777776689999999998 6889999999997 9999999764321 10 0
Q ss_pred ccch-hhcccceEEEEeccCCC--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336 300 TKPI-NVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 372 (373)
Q Consensus 300 ~~~~-~~~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~ 372 (373)
.... .+.+++++.|+..+.+. ..+.++++++++.+|++.+. +.+.|+|+++++|++.+.+++. +|+||++.
T Consensus 272 ~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 272 HNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred ccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 1222 23488899988754321 12357789999999988643 6778999999999999999885 59999875
No 66
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.6e-39 Score=304.18 Aligned_cols=332 Identities=25% Similarity=0.399 Sum_probs=270.3
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++.+++....+++.+.|.++++||+|||.++++|++|+....|..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 789999988774448999999999999999999999999999888775433 2367899999999999999999999999
Q ss_pred EEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 84 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 84 ~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
+|++.+ ..+|+.|.+|..+..+.|.+.... |+. ..|+|+||+.++.++++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKNA---GYT-------------------VDGGMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCcccc---Ccc-------------------ccCcceeEEEEchHHeEeCCCCCC
Confidence 998754 568999999999999999865432 211 136999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~-~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~ 241 (373)
+++++.++..+.|||+++ ..+.++++++|||+|+|.+|++++++|+. +|+ +|+++++++++++.++++|++.++++.
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999986 77889999999999999999999999998 499 799999999999999999998888875
Q ss_pred C-CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCC
Q 017336 242 E-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY 319 (373)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~ 319 (373)
. .+ +.+.+++.++ ++|+++++.++.+.+..++++++++ |+++.+|...... ...... ..+..++.++....
T Consensus 216 ~~~~--~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~- 288 (338)
T PRK09422 216 RVED--VAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESM--DLSIPRLVLDGIEVVGSLVGT- 288 (338)
T ss_pred cccc--HHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCc--eecHHHHhhcCcEEEEecCCC-
Confidence 3 33 6667777666 6886555555668899999999997 9999998654222 222222 23677776654322
Q ss_pred CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336 320 KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 372 (373)
Q Consensus 320 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~ 372 (373)
.+.++++++++.++.+.. .+ ..++++++++|++.+.+++. +|+++++.
T Consensus 289 --~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 289 --RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred --HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 246888999999997753 24 46899999999999988775 48888653
No 67
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3.6e-39 Score=302.03 Aligned_cols=333 Identities=30% Similarity=0.436 Sum_probs=270.3
Q ss_pred hccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC---CCCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 017336 9 AWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 85 (373)
Q Consensus 9 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 85 (373)
-+.++.++++++.+.|.|+++||+||+.++++|+.|+..+.+.. ....+|.++|+|++|+|+++|++++.|++||+|
T Consensus 4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 45677789999999999999999999999999999988765431 123457789999999999999999999999999
Q ss_pred eecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh
Q 017336 86 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 165 (373)
Q Consensus 86 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~ 165 (373)
+..+++.|+.|..|..+.++.|...++. |.. ..|+|++|+.++++.++++|++++.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~ 141 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKIF---GVD-------------------TDGCFAEYAVVPAQNIWKNPKSIPPEY 141 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcceE---eec-------------------CCCcceeEEEeehHHcEECcCCCChHh
Confidence 9999999999999999999999886433 211 236999999999999999999999855
Q ss_pred hhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc
Q 017336 166 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245 (373)
Q Consensus 166 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 245 (373)
+ +++..+.+|++++ .....++++|+|.|+|.+|++++|+|+.+|++.|+++++++++.+.++++|++.++++...+
T Consensus 142 a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~- 217 (340)
T TIGR00692 142 A-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED- 217 (340)
T ss_pred h-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccC-
Confidence 4 5667888888875 34577899999988899999999999999995588888889999999999998888776554
Q ss_pred cHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCCCC
Q 017336 246 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTD 324 (373)
Q Consensus 246 ~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 324 (373)
+.+.+.+.+++ ++|++||++|+...+...+++|+++ |+++.+|.......+.+....+.+++++.+... ....+.
T Consensus 218 -~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 293 (340)
T TIGR00692 218 -VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFET 293 (340)
T ss_pred -HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhh
Confidence 77888777766 8999999998767889999999997 999999875422222222122336667766441 122345
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEEec
Q 017336 325 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISM 371 (373)
Q Consensus 325 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~~~ 371 (373)
+.+++++++++++.+.+++.+.++++++.++++.+.+++.+|+++++
T Consensus 294 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 294 WYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 78899999999887655578999999999999999877667888864
No 68
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.6e-39 Score=302.38 Aligned_cols=336 Identities=29% Similarity=0.479 Sum_probs=274.2
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++.+.+. +++++.++|+++++||+|++.++++|+.|+....+.+ ....|.++|+|++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999988765 8999999999999999999999999999998877754 234578899999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
+|+..+...|+.|++|..+.+..|+..... |. ...|+|++|+.++++.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDYI---GS-------------------RRDGAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcceE---ec-------------------ccCCcccceEEechHHeEECcCCCCH
Confidence 999999999999999999999999864322 11 12369999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~ 243 (373)
++++.+ ..+++||.++. ...+.++++|||+|+|.+|++++|+|+.+|+++|+++++++++.+.++++|++.++++...
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~ 214 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEE 214 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccc
Confidence 998887 57889999875 7789999999999889999999999999999559999888999999999999888877653
Q ss_pred CccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc--hhhcccceEEEEeccCCC
Q 017336 244 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP--INVLNERTLKGTFFGNYK 320 (373)
Q Consensus 244 ~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~--~~~~~~~~i~g~~~~~~~ 320 (373)
. .+.+....++ ++|++|||+|+...+..++++|+++ |+++.+|.......+.... ..+.++.++.++......
T Consensus 215 ~---~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (343)
T cd08236 215 D---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA 290 (343)
T ss_pred c---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence 2 4556666666 7999999998867889999999997 9999998664322222111 112477888777653221
Q ss_pred --CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHc-CCc-eeEEE
Q 017336 321 --PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVK-GEG-LRCII 369 (373)
Q Consensus 321 --~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~-~~~-~k~v~ 369 (373)
..+.+++++++++++.+.+.+.+.+.+++++++++++.+.+ +.. .|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 291 PFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 13468888999999987644446789999999999999988 443 47654
No 69
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=2.4e-40 Score=301.41 Aligned_cols=269 Identities=27% Similarity=0.431 Sum_probs=219.8
Q ss_pred cccccceEEEEEeCCCCC------CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCc
Q 017336 60 IFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP 133 (373)
Q Consensus 60 i~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~ 133 (373)
++|||++|+|+++|++|+ .|++||||++.+..+|+.|.+|+.|+++.|++.... |+...++ +
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~~--~------- 68 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALDS--G------- 68 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---CcccccC--C-------
Confidence 589999999999999999 899999999999999999999999999999875543 3210000 0
Q ss_pred cccccCCcceeeEEEEecC-ceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC
Q 017336 134 VNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG 212 (373)
Q Consensus 134 ~~~~~~~G~~a~~~~v~~~-~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g 212 (373)
....|+|+||+.++++ .++++|+++++++++.+++.+.|||+++. .....++++|||+|+|++|++++|+|+.+|
T Consensus 69 ---~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 69 ---WPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred ---ccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 0123699999999997 79999999999999999999999999864 455669999999999999999999999999
Q ss_pred CcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336 213 ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 213 ~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
+++|++++++++|+++++++|++.++++.. ..+.+.+.+.+ ++|++||++|++..+..++++++++ |+++.+|.
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~ 219 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS 219 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence 966999989999999999999998887643 23455666665 8999999999878899999999997 99999997
Q ss_pred CCCCceeeccchhh-cccceEEEEeccCCCCCCCHHHHHHHHHcC--CCCCCCceeeeeccccH
Q 017336 292 PSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMNK--QLELEKFITHRIPFSEI 352 (373)
Q Consensus 292 ~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~~l~~~ 352 (373)
........++...+ .+++++.|+..+. .+++.++++++.++ ++++.++++++|||+++
T Consensus 220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 220 VFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 54222333344334 4899999876432 34689999999984 67777889999999874
No 70
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=5.6e-39 Score=299.49 Aligned_cols=329 Identities=28% Similarity=0.474 Sum_probs=270.3
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++..++.++.+++.|.|.+.++||+|+++++++|++|+....|..+....|.++|+|++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999887666699999999999999999999999999999999888666566788999999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
+|++.+..+|+.|++|..+..+.|.+... .|.. ..|+|++|++++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRAE---YGEE-------------------VDGGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCccc---cccc-------------------cCCeeeeEEEechhheEECCCCCCH
Confidence 99999999999999999999999987521 1211 2469999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 242 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~ 242 (373)
++++.+++++.+||+++.. +.+.+++++||+|+ |.+|++++++++..|+ +|+++.+++++.+.+++++.+.+++..+
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999998766 88999999999987 9999999999999999 7888888888999998899877765433
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce-eeccchhhcccceEEEEeccCCCC
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGNYKP 321 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~ 321 (373)
+.+.+.+.. ++|++++++|. .....++++++++ |+++.+|....... +.... ...++..+.++.. ..
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~ 284 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGL-LILKEIRIIGSIS---AT 284 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHH-HHhCCcEEEEecC---CC
Confidence 444454443 79999999998 5688899999997 99999987542221 11111 1235666666531 12
Q ss_pred CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 322 RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 322 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
.++++++++++.++.+.+ ++.+.|+++++++|++.+.+++. .|++++
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 285 KADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 345788999999997653 47789999999999999988775 477763
No 71
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=3e-39 Score=300.39 Aligned_cols=308 Identities=22% Similarity=0.294 Sum_probs=255.9
Q ss_pred cchhhhccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCC
Q 017336 4 TAAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL 79 (373)
Q Consensus 4 ~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~ 79 (373)
|||+++.+++.+ +++.+++.|.++++||+|||.++++|++|+..+.|.++ ...+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689998877653 78899999999999999999999999999998877654 34568899999999999999999999
Q ss_pred CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336 80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
++||+|++.+. .|+|++|+.+++..++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECCC
Confidence 99999985420 25899999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi 238 (373)
++++++++.+++.+.+||+++ ..+.+.++++|||+|+ |.+|++++|+|+++|+ +++++.+++++.+.++++|++.++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999998899999975 5588999999999987 9999999999999999 788888888888888889998888
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEec
Q 017336 239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFF 316 (373)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~ 316 (373)
++.+.+ +.+.+.+.+++ ++|++||++|+ .....++++++++ |+++.+|... .....+... .+.++.++.++..
T Consensus 190 ~~~~~~--~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 264 (324)
T cd08292 190 STEQPG--WQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWG 264 (324)
T ss_pred cCCCch--HHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEc
Confidence 776654 78888888887 89999999998 5778999999997 9999998753 222222222 2348888888765
Q ss_pred cCCC-------CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336 317 GNYK-------PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 369 (373)
Q Consensus 317 ~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~ 369 (373)
.... ..+.+.++++++.++.+.+. +.+.|+++++.+|++.+.++.. .|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv 323 (324)
T cd08292 265 GRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLL 323 (324)
T ss_pred HHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEe
Confidence 4321 11357889999999988653 4788999999999999887654 47775
No 72
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=7e-39 Score=299.97 Aligned_cols=332 Identities=26% Similarity=0.409 Sum_probs=262.2
Q ss_pred hccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccc-cCCC--CCCCCccccccceEEEEEeCCCCCCCCCCCEE
Q 017336 9 AWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 85 (373)
Q Consensus 9 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V 85 (373)
+++.+. +++++.++|.++++||+||+.++++|++|+.... +..+ ...+|.++|+|++|+|+++|++++.|++||+|
T Consensus 3 ~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V 81 (339)
T cd08232 3 IHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV 81 (339)
T ss_pred eccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence 344544 8999999999999999999999999999987653 3221 12457889999999999999999999999999
Q ss_pred eecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh
Q 017336 86 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 165 (373)
Q Consensus 86 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~ 165 (373)
++.+.++|++|.+|..|+++.|.+..+. |....+ ....|+|++|+.++++.++++|+++++++
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~~ 144 (339)
T cd08232 82 AVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLRR 144 (339)
T ss_pred EEccCCcCCCChHHhCcCcccCccccce---eecccc--------------CCCCCceeeEEEechHHeEECcCCCCHHH
Confidence 9999999999999999999999874322 211000 00136999999999999999999999998
Q ss_pred hhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc
Q 017336 166 VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245 (373)
Q Consensus 166 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 245 (373)
++. ..++++||+++...... ++++|||.|+|.+|++++|+|+++|+.+|+++++++++.+.++++|++.+++++..+
T Consensus 145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~- 221 (339)
T cd08232 145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP- 221 (339)
T ss_pred hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh-
Confidence 876 56888999987665556 899999998899999999999999986788998889999999999998888776543
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCCCCCC
Q 017336 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTD 324 (373)
Q Consensus 246 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~ 324 (373)
+.+ +. ...+++|+++|+.|+...+..++++|+++ |+++.+|..... ....... +.+++++.+... ..+.
T Consensus 222 -~~~-~~-~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~ 291 (339)
T cd08232 222 -LAA-YA-ADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGGP--VPLPLNALVAKELDLRGSFR----FDDE 291 (339)
T ss_pred -hhh-hh-ccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccCcHHHHhhcceEEEEEec----CHHH
Confidence 211 11 11226999999999767789999999997 999999864422 2222222 347777776642 2346
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC-ceeEEEec
Q 017336 325 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE-GLRCIISM 371 (373)
Q Consensus 325 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~-~~k~v~~~ 371 (373)
+.++++++.++.+.+.+.+.++|+++++++|++.+.+++ .+|+++++
T Consensus 292 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 292 FAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 888999999998876666789999999999999998766 45888764
No 73
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.3e-38 Score=298.37 Aligned_cols=334 Identities=30% Similarity=0.483 Sum_probs=277.0
Q ss_pred cchhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 017336 4 TAAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 4 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
|||+++..++ ..+++.+++.|.|.++|++||+.++++|++|+....+..+. ...|.++|+|++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899988776 34999999999999999999999999999999887775532 344678999999999999999999999
Q ss_pred CCEEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 82 GDHVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 82 Gd~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
||+|+..+ ..+|+.|.+|+.++.+.|.+.... |+. ..|+|++|+.++++.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS---GYT-------------------VDGTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCcccc---ccc-------------------cCCcceeEEEeccccEEECCCC
Confidence 99999765 578999999999999999764433 211 1358999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++.+++.++..+.|||+++.. ..+.++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998755 58999999999987 6799999999999999 8999999999999999999998888
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 317 (373)
+...+ +.+.+.+.+++ ++|+++|+.++......++++++++ |+++.+|.... ....+....+ .++.++.+....
T Consensus 217 ~~~~~--~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 292 (341)
T cd08297 217 FKKSD--DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVG 292 (341)
T ss_pred CCCcc--HHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccC
Confidence 76654 77778887765 8999999888778899999999997 99999986542 2223332322 377888775432
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
. .+.+++++++++++.+.+ ....|++++++++++.+.++.. .|++++|
T Consensus 293 ~---~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 293 T---RQDLQEALEFAARGKVKP---HIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred C---HHHHHHHHHHHHcCCCcc---eeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 1 246888999999998753 2367999999999999988774 5888875
No 74
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3.4e-39 Score=301.94 Aligned_cols=310 Identities=20% Similarity=0.244 Sum_probs=245.2
Q ss_pred cchhhhccCCC-CeEEEEeec----CCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccc--eEEEEEeCCC
Q 017336 4 TAAAVAWEAGK-PLIIQDVEV----APPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEA--AGVVESVGEG 75 (373)
Q Consensus 4 ~~a~~~~~~~~-~~~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~--~G~V~~vG~~ 75 (373)
+|++....++. .|++++.++ |+|+++||||||+|++||+.|++...|.+.. ..+|.++|+++ .|++..+|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 8 LKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred EecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 45555322222 388999988 8899999999999999999999988875432 35678889754 4566668888
Q ss_pred CCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec-Cce
Q 017336 76 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCV 154 (373)
Q Consensus 76 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~-~~~ 154 (373)
++.|++||+|+.. |+|+||+++++ ..+
T Consensus 88 v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~~ 115 (338)
T cd08295 88 NPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQDL 115 (338)
T ss_pred CCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhce
Confidence 8899999999833 48999999999 799
Q ss_pred EeCC-CCCCch-hhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336 155 AKIN-PLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 231 (373)
Q Consensus 155 ~~~p-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~ 231 (373)
+++| +.+++. ++++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.+.+++
T Consensus 116 ~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~ 194 (338)
T cd08295 116 RKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKN 194 (338)
T ss_pred eecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 9995 678886 788899999999999878889999999999997 9999999999999999 79998899999999998
Q ss_pred -cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCcee----eccch-hh
Q 017336 232 -FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF----MTKPI-NV 305 (373)
Q Consensus 232 -lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~----~~~~~-~~ 305 (373)
+|++.++++.+.. ++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|........ ..... .+
T Consensus 195 ~lGa~~vi~~~~~~-~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~ 271 (338)
T cd08295 195 KLGFDDAFNYKEEP-DLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNII 271 (338)
T ss_pred hcCCceeEEcCCcc-cHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHh
Confidence 9999998865421 27777777765689999999998 7889999999997 999999865422110 01112 23
Q ss_pred cccceEEEEeccCCCC--CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 306 LNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 306 ~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
.+++++.++....+.. .+.++++++++.++++.+. +...|+++++++|++.+.+++. +|+++++
T Consensus 272 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 272 YKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred hccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 3777888765433221 1246778899999988654 4567999999999999988775 5988864
No 75
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=2.6e-39 Score=276.82 Aligned_cols=313 Identities=21% Similarity=0.321 Sum_probs=253.5
Q ss_pred cchhhhccCCCC---eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 017336 4 TAAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL 79 (373)
Q Consensus 4 ~~a~~~~~~~~~---~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~ 79 (373)
.|+++|.+.+.| +++.+.++|+....+|+|+.+|+.|||+|+-.++|.|+- +++|.+-|.|++|+|+.+|+++++|
T Consensus 20 ~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgf 99 (354)
T KOG0025|consen 20 SKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGF 99 (354)
T ss_pred cceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCcc
Confidence 578999999998 788999999988888999999999999999999999984 6789999999999999999999999
Q ss_pred CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336 80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
++||+|+... .+.|+|++|...+++.++++++
T Consensus 100 k~Gd~VIp~~------------------------------------------------a~lGtW~t~~v~~e~~Li~vd~ 131 (354)
T KOG0025|consen 100 KPGDWVIPLS------------------------------------------------ANLGTWRTEAVFSESDLIKVDK 131 (354)
T ss_pred CCCCeEeecC------------------------------------------------CCCccceeeEeecccceEEcCC
Confidence 9999999652 1358999999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH----HHHHHhcCC
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGV 234 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~----~~~~~~lg~ 234 (373)
.++++.||++..+.+|||..|.+...+.+|++|+-.|+ +++|.+.+|+|+++|++.+-++ |+... .+.++.+|+
T Consensus 132 ~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~lGA 210 (354)
T KOG0025|consen 132 DIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKSLGA 210 (354)
T ss_pred cCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHHcCC
Confidence 99999999999999999999989999999999999998 9999999999999999555444 65433 344567999
Q ss_pred ceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEE
Q 017336 235 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLK 312 (373)
Q Consensus 235 ~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~ 312 (373)
++|+..++... .+..+..... ++.+.|||+|+ .......+.|..+ |+.+.+|..+... ...+.. .++|+++++
T Consensus 211 ~~ViTeeel~~--~~~~k~~~~~~~prLalNcVGG-ksa~~iar~L~~G-gtmvTYGGMSkqP-v~~~ts~lIFKdl~~r 285 (354)
T KOG0025|consen 211 TEVITEEELRD--RKMKKFKGDNPRPRLALNCVGG-KSATEIARYLERG-GTMVTYGGMSKQP-VTVPTSLLIFKDLKLR 285 (354)
T ss_pred ceEecHHHhcc--hhhhhhhccCCCceEEEeccCc-hhHHHHHHHHhcC-ceEEEecCccCCC-cccccchheeccceee
Confidence 99986544221 1111121222 78999999999 5667788999997 9999999887543 333333 355999999
Q ss_pred EEeccCCCCCC--------CHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEEecC
Q 017336 313 GTFFGNYKPRT--------DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCIISME 372 (373)
Q Consensus 313 g~~~~~~~~~~--------~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~~~~ 372 (373)
|+++..+...+ ...++..++++|++... -....+|++...|++...+... +|.++.++
T Consensus 286 GfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 286 GFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred eeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHHHhccCCceEEEec
Confidence 99987765442 25678889999987644 3567799999999997665443 37776654
No 76
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.1e-38 Score=294.92 Aligned_cols=332 Identities=31% Similarity=0.489 Sum_probs=271.9
Q ss_pred cchhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCC
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD 83 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 83 (373)
|||+++.+++. +++.+.+.|+++++||+||+.++++|+.|+....|..+. .+|.++|+|++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999888775 999999999999999999999999999999988876543 3788999999999999999999999999
Q ss_pred EEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 84 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 84 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
+|++.+...|+.|.+|..++.+.|...... |. ...|+|++|+.+++++++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTAV---GV-------------------TRNGGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCccee---cc-------------------CCCCcceeEEEecHHHcEECcCCCCH
Confidence 999999999999999999999888754210 10 01369999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~ 243 (373)
.+++.+ ..+.++++++ +.+.+.++++|||+|+|.+|.+++++|+.+|++.|+++++++++.+.++++|++.+++....
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 214 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRE 214 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCC
Confidence 988766 6788999886 77899999999999889999999999999999558888899999999999999888776654
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPR 322 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~ 322 (373)
+ +... +...++++|++||++|+......++++|+++ |+++.+|..............+. +++++.+.... .
T Consensus 215 ~--~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 286 (334)
T cd08234 215 D--PEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----P 286 (334)
T ss_pred C--HHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----H
Confidence 4 4444 3333338999999998767889999999997 99999987653222333333322 67777776432 2
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCceeEEE
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCII 369 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~k~v~ 369 (373)
+.+++++++++++.+.+.+++++.|+++++++|++.+.+....|+++
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 333 (334)
T cd08234 287 YTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRSGGALKVVV 333 (334)
T ss_pred HHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhcCCceEEEe
Confidence 35888999999998876555788999999999999998833457775
No 77
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2e-38 Score=297.58 Aligned_cols=299 Identities=17% Similarity=0.216 Sum_probs=230.5
Q ss_pred eEEEEeecCCCC-CCeEEEEEeeeecCcccccccc---cCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcC
Q 017336 16 LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWE---SKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 91 (373)
Q Consensus 16 ~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~---g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 91 (373)
+++++.+.|+|. ++||||||.|+|||+.|..... +.....++|.++|||++|+|+++|++++.|++||+|+..
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--- 99 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF--- 99 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence 788999999874 9999999999999999853322 111123567899999999999999999999999999843
Q ss_pred CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh----hh
Q 017336 92 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK----VC 167 (373)
Q Consensus 92 ~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~----aa 167 (373)
.++|+||++++++.++++|+++++++ ++
T Consensus 100 ------------------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 100 ------------------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred ------------------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 03799999999999999999864432 44
Q ss_pred hcccchhhhhhhhhhccCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCC
Q 017336 168 ILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH 243 (373)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~~--~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~ 243 (373)
.++.+++|||+++.+.++++++ ++|||+|+ |++|++++|+|+.+|+.+|+++++++++.+.+++ +|++.++++.+.
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~ 211 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD 211 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC
Confidence 5677899999998777888876 99999997 9999999999999998669999899999998876 999999988765
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC---cee--eccc--hhhc--ccceEEEE
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---AVF--MTKP--INVL--NERTLKGT 314 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~---~~~--~~~~--~~~~--~~~~i~g~ 314 (373)
+ +.+.+++.+++++|++||++|+ ..+..++++|+++ |+++.+|..... ... .... ..+. +++++.+.
T Consensus 212 ~--~~~~i~~~~~~gvd~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (345)
T cd08293 212 N--VAERLRELCPEGVDVYFDNVGG-EISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERF 287 (345)
T ss_pred C--HHHHHHHHCCCCceEEEECCCc-HHHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEE
Confidence 5 8888888776689999999998 5678999999997 999999853211 111 0100 1111 23333332
Q ss_pred eccCCCC--CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 315 FFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 315 ~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
....+.. .+.++++++++.++++.+. ....++++++++|++.+.+++. +|+++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 288 LVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 2111111 1236677889999988654 4456799999999999988774 5998864
No 78
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.4e-38 Score=296.25 Aligned_cols=318 Identities=25% Similarity=0.329 Sum_probs=255.8
Q ss_pred cchhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++..++ ..+++.+.+.|+++++||+|++.++++|++|+....+ .....+|.++|||++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6888887665 3488888899889999999999999999999988764 2223457889999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|++.+..+|++|++|+.|+++.|++..+. |+ ...|+|++|+.++++.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGII---GV-------------------VSNGGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCcccee---ec-------------------cCCCceeeEEEcCHHHceeCCCCCC
Confidence 9999999999999999999999999864322 21 1236999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~ 241 (373)
+++++.+++++.+||+++. .++++++++|+|+|+ |.+|++++++|+++|+ +|+++.+ .+.++++|++.+++.+
T Consensus 138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence 9999999999999999865 488999999999997 9999999999999999 6777752 3677889998887654
Q ss_pred CCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCCC
Q 017336 242 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYK 320 (373)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~ 320 (373)
+ +.+.+++.+ +++|+|+|++|+ ..+..++++|+++ |+++.+|... ......+...+ .++.++.++..+.
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-- 281 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGGT-- 281 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCCC--
Confidence 3 344566655 689999999998 7889999999997 9999998742 11223332323 3666777764332
Q ss_pred CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce
Q 017336 321 PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL 365 (373)
Q Consensus 321 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~ 365 (373)
.+.+.++++++... . ..+.+.|+++++++|++.+.++...
T Consensus 282 -~~~~~~~~~l~~~~--~--~~~~~~~~~~~~~~a~~~~~~~~~~ 321 (325)
T cd08264 282 -RKELLELVKIAKDL--K--VKVWKTFKLEEAKEALKELFSKERD 321 (325)
T ss_pred -HHHHHHHHHHHHcC--C--ceeEEEEcHHHHHHHHHHHHcCCCc
Confidence 24678888888533 2 2367899999999999998876643
No 79
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=2.5e-38 Score=295.17 Aligned_cols=327 Identities=30% Similarity=0.472 Sum_probs=268.1
Q ss_pred chhhhccCCCCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Q 017336 5 AAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH 84 (373)
Q Consensus 5 ~a~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~ 84 (373)
||+++.+++..+++.+.+.|.+.+++|+|++.++++|++|+....+..+...+|.++|||++|+|+++|++++.|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 67888888667999999999999999999999999999999988876655567889999999999999999999999999
Q ss_pred EeecCc-CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCc
Q 017336 85 VLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL 163 (373)
Q Consensus 85 V~~~~~-~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~ 163 (373)
|++.+. .+|+.|++|.+++++.|++..+. ++. ..|+|++|+.+++++++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-------------------TQGGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-------------------cCCccccEEEEcHHHeEECCCCCCH
Confidence 987554 67999999999999999986544 210 1258999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC
Q 017336 164 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 243 (373)
Q Consensus 164 ~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~ 243 (373)
.+++.+++.+.+||.++.. ..+.++++|||+|+|.+|++++++|+.+|+ +|+++.+++++.+.++++|++.+++....
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~ 216 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAE 216 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCc
Confidence 9999999999999998754 789999999999988899999999999999 79999999999999999998888765543
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEeccCCCCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKPR 322 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~ 322 (373)
. .... ..+++|+++|++++......++++++++ |+++.++..... ....... .+.++.++.++..+. .
T Consensus 217 ~--~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~ 285 (330)
T cd08245 217 L--DEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---R 285 (330)
T ss_pred c--hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---H
Confidence 2 2221 2247999999988778889999999997 999999865322 1111122 223677777765432 2
Q ss_pred CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEE
Q 017336 323 TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII 369 (373)
Q Consensus 323 ~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~ 369 (373)
..++++++++.++.+.+ ..+.|+++++++|++.+.+++.. |+++
T Consensus 286 ~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 286 ADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 35778889998987753 45789999999999999877754 6553
No 80
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=5.1e-38 Score=293.77 Aligned_cols=334 Identities=24% Similarity=0.365 Sum_probs=273.6
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++...+.+ +++.+.+.|.+.+++|+|++.++++|++|+..+.|..+ ...+|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 688888744432 78888888889999999999999999999988877543 234578899999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|++.+..+|+.|.+|.++.+|.|+...+. |.. ..|+|++|+.++++.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGIL---GEH-------------------VDGGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhcccccccccccccc---ccc-------------------cCcceeEEEEechHHceeCCCC
Confidence 999999999999999999999999999864222 211 1368999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++++++.+++++.+||+++.+...+.++++++|+|+ +.+|++++++++..|+ +|+++++++++.+.++.++.+.+++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999999899999998878888999999999998 6999999999999999 7888889999999998888877776
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~ 317 (373)
....+ +.+.+...+.+ ++|++++++|. ..+..++++++++ |+++.++..... ...... ..+.++.++.+....
T Consensus 218 ~~~~~--~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
T cd08266 218 YRKED--FVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMG 292 (342)
T ss_pred cCChH--HHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecC
Confidence 54433 66666666655 89999999998 6788999999997 999999876432 122222 224577777776543
Q ss_pred CCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 318 NYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
. ...+.++++++.++.+.+ ++++.|+++++++|++.+.++.. .|++++
T Consensus 293 ~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 293 T---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred C---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 2 235778889999987653 47889999999999999887664 488875
No 81
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=4.4e-38 Score=293.33 Aligned_cols=322 Identities=27% Similarity=0.385 Sum_probs=264.5
Q ss_pred cchhhhccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCC
Q 017336 4 TAAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 79 (373)
Q Consensus 4 ~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 79 (373)
|||+++.++++ ++++.+.+.|.++++||+||+.++++|++|+....|..+...+|.++|||++|+|+++|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68888888774 58888888888999999999999999999999888866555678899999999999999999999
Q ss_pred CCCCEEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336 80 EVGDHVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 158 (373)
Q Consensus 80 ~~Gd~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 158 (373)
++||+|++.+ .++|+.|.+|.++..++|....+. |+. ..|+|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT---GYT-------------------VDGGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc---ccc-------------------cCCceEEEEEecchhEEECC
Confidence 9999997654 468999999999999999865543 221 13699999999999999999
Q ss_pred CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336 159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238 (373)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi 238 (373)
+++++.+++.+++++.|||+++ +.+++++++++||+|+|.+|++++++++..|+ +|+++.+++++++.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999987 88999999999999999999999999999998 899998999999999999998777
Q ss_pred cCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336 239 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 318 (373)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 318 (373)
+.... ...++|+++++.+....++.++++++++ |+++.+|... ..........+.++..+.++...
T Consensus 217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~- 282 (329)
T cd08298 217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYELLWGEKTIRSVANL- 282 (329)
T ss_pred ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhhhhCceEEEEecCC-
Confidence 65432 1237999999977768899999999997 9999988532 11111112223355566665422
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI 368 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v 368 (373)
..+.+.+++++++++.+.+ ..+.|+++++++|++.+.+++.. |++
T Consensus 283 --~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v 328 (329)
T cd08298 283 --TRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRIRGAAV 328 (329)
T ss_pred --CHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCCcceee
Confidence 1235788889999987754 36889999999999999887654 665
No 82
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.1e-38 Score=295.37 Aligned_cols=304 Identities=21% Similarity=0.250 Sum_probs=243.5
Q ss_pred ccchhhhccC--CCC----eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCC
Q 017336 3 STAAAVAWEA--GKP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV 76 (373)
Q Consensus 3 ~~~a~~~~~~--~~~----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v 76 (373)
+|||+++.++ +.+ +++.+.+.|+|+++||+|||.++++|+.|...... ..++|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 5889888883 333 78899999999999999999999999987653211 124688999999999985 45
Q ss_pred CCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC---c
Q 017336 77 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG---C 153 (373)
Q Consensus 77 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~---~ 153 (373)
+.|++||||+.. ++|++|+.++++ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 679999999843 378999999999 9
Q ss_pred eEeCCCCCC--c---hhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH
Q 017336 154 VAKINPLAP--L---DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE 227 (373)
Q Consensus 154 ~~~~p~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~ 227 (373)
++++|++++ + ..+++++++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 999999988 2 2334678899999999888899999999999986 9999999999999999 7999989999999
Q ss_pred HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce--e---eccc
Q 017336 228 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F---MTKP 302 (373)
Q Consensus 228 ~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~---~~~~ 302 (373)
.++++|++.++++.+.+ +.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|....... . ....
T Consensus 183 ~l~~~Ga~~vi~~~~~~--~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~ 258 (329)
T cd08294 183 WLKELGFDAVFNYKTVS--LEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ 258 (329)
T ss_pred HHHHcCCCEEEeCCCcc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence 99999999999887655 7788888776689999999998 7889999999997 99999986432111 1 1111
Q ss_pred -hhhcccceEEEEeccCCC--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 303 -INVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 303 -~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
..+.+++++.++....+. ..+.++++++++.++++.+. ....|+++++++|++.+.+++. +|+++++
T Consensus 259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 223477888876643321 11236778899999988765 3457999999999999988775 5888864
No 83
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.7e-38 Score=294.23 Aligned_cols=290 Identities=19% Similarity=0.252 Sum_probs=234.1
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCC
Q 017336 16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGD 95 (373)
Q Consensus 16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~ 95 (373)
+++.+.+.|+|++|||||||.++++|+.|.. |.++....|.++|.|++|+|+++|+ .|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence 8889999999999999999999999997654 3333334578999999999999874 59999999843
Q ss_pred CccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC----CCCCCchhh-hhcc
Q 017336 96 CRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI----NPLAPLDKV-CILS 170 (373)
Q Consensus 96 ~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~----p~~~~~~~a-a~~~ 170 (373)
++|++|+.++.+.+.++ |++++++++ ++++
T Consensus 86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~ 120 (325)
T TIGR02825 86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG 120 (325)
T ss_pred ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence 26899999999888877 899999887 6788
Q ss_pred cchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHH
Q 017336 171 CGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 249 (373)
Q Consensus 171 ~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~ 249 (373)
++++|||+++.+.++++++++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++++|++.++++.+.+ .+.+
T Consensus 121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~ 198 (325)
T TIGR02825 121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEE 198 (325)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHH
Confidence 999999999888899999999999986 9999999999999999 799998999999999999999999876532 2555
Q ss_pred HHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC---ceeec--cc-hhhcccceEEEEeccCCCC--
Q 017336 250 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---AVFMT--KP-INVLNERTLKGTFFGNYKP-- 321 (373)
Q Consensus 250 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~---~~~~~--~~-~~~~~~~~i~g~~~~~~~~-- 321 (373)
.++..+++++|++||++|+ ..+..++++++++ |+++.+|..... ..... .. ..+.+++++.++....+..
T Consensus 199 ~~~~~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 276 (325)
T TIGR02825 199 TLKKASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV 276 (325)
T ss_pred HHHHhCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence 6666665589999999998 5679999999997 999999875321 11111 11 1233777887765432211
Q ss_pred -CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336 322 -RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 369 (373)
Q Consensus 322 -~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~ 369 (373)
.+.++++++++.++++.+. +...|+|+++++|++.+.+++. +|+|+
T Consensus 277 ~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv 324 (325)
T TIGR02825 277 RQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIV 324 (325)
T ss_pred hHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEe
Confidence 2357789999999988765 5577999999999999988775 48776
No 84
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.8e-37 Score=286.11 Aligned_cols=300 Identities=26% Similarity=0.446 Sum_probs=247.9
Q ss_pred cchhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++.+.+ ..+++++++.|.+.++||+|++.++++|++|+....+.+.....|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5788877655 348999999999999999999999999999998877765444557899999999999999999999999
Q ss_pred CEEeecC-cCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 83 DHVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 83 d~V~~~~-~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
|+|++.+ ..+|+.|++|.++.++.|...... |. ...|+|++|++++++.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGI---GT-------------------QADGGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCcee---ee-------------------cCCCceEEEEEcchHHeEECcCCC
Confidence 9999876 478999999999999999864321 21 123699999999999999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEE--cCChhHHHHHHhcCCceeec
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~--~~~~~~~~~~~~lg~~~vi~ 239 (373)
++++++ ++..+++||+++...+.+.++++|||.|+|.+|++++|+|+++|+ +|+++ .+++++.+.++++|++.+ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 666888999998888899999999998889999999999999999 67666 345668888899999877 6
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 317 (373)
+...+ +.+.+...+++ ++|++||++|+...+..++++|+++ |+++.+|.... ....+....+ .++++|.|+.++
T Consensus 216 ~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~ 291 (306)
T cd08258 216 GGEED--LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSS 291 (306)
T ss_pred CCcCC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecC
Confidence 65554 77778777765 8999999998767889999999997 99999998652 2233332323 499999998864
Q ss_pred CCCCCCCHHHHHHHHHcC
Q 017336 318 NYKPRTDLPSVVDMYMNK 335 (373)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~ 335 (373)
. +++++++++++++|
T Consensus 292 ~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 292 T---PASWETALRLLASG 306 (306)
T ss_pred c---hHhHHHHHHHHhcC
Confidence 4 45789999988764
No 85
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.8e-37 Score=291.68 Aligned_cols=322 Identities=25% Similarity=0.289 Sum_probs=254.0
Q ss_pred cchhhhccCCCC--eEEE-EeecCCCCCCeEEEEEeeeecCcccccccccCCC--------------------CCCCCcc
Q 017336 4 TAAAVAWEAGKP--LIIQ-DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------------------TPLFPRI 60 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~i 60 (373)
|||+++...+.+ +++. +.+.|.|.+++|+|||.++++|++|+....|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688887766543 4554 3577788999999999999999999988776432 2456889
Q ss_pred ccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCC
Q 017336 61 FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGT 140 (373)
Q Consensus 61 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~ 140 (373)
+|||++|+|+++|++++.|++||+|++.+..+|+.|..|. .|.. . |.. ..
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~~~---~---~~~-------------------~~ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DIDY---I---GSE-------------------RD 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----cccc---c---CCC-------------------CC
Confidence 9999999999999999999999999998888888876642 1211 0 100 12
Q ss_pred cceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Q 017336 141 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 219 (373)
Q Consensus 141 G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~ 219 (373)
|+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ....+.++++|||+|+ |.+|++++++|+.+|+ +++++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 5999999999999999999999999999999999999986 7788999999999998 9999999999999999 67777
Q ss_pred cCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCcee
Q 017336 220 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 298 (373)
Q Consensus 220 ~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~ 298 (373)
.+++ +++.++++|++.+++..... +.+ ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|..... ..
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~~~--~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~ 280 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDAPL--LAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAGP-VV 280 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCCcc--HHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCCc-cc
Confidence 6655 88888999997665544332 333 344454 89999999998 6889999999997 999999865321 12
Q ss_pred eccchh-hcccceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 299 MTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 299 ~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
.++... +.++.++.++.... .+.+.++++++.++++.. ++.+.|+++++++|++.+.++.. .|++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 281 ELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred cCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence 333333 34788888876532 346888999999997653 46789999999999999987764 488875
No 86
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=3.3e-37 Score=287.24 Aligned_cols=314 Identities=21% Similarity=0.263 Sum_probs=252.6
Q ss_pred ccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCC
Q 017336 3 STAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 3 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
+||++++.+++.+ +++++++.|.|+++||+||+.++++|++|+....+.++...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 3899999887775 88899999999999999999999999999998877666555788999999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|+... .+.|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~------------------------------------------------~~~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQ------------------------------------------------SALGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECC------------------------------------------------CCCcceeeEEEcCHHHceeCCCC
Confidence 999997431 01258999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++++++.+++.+.+||.++.+...+.++++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999988899999998877788999999999975 9999999999999999 7888889999999999999988887
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceE-EEEec
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTL-KGTFF 316 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i-~g~~~ 316 (373)
.+..+ +.+.+++.+++ ++|++|||+|+ .....++++++++ |+++.+|...... .......+. ++..+ .....
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (327)
T PRK10754 192 YREEN--IVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGPV-TGVNLGILNQKGSLYVTRPSL 266 (327)
T ss_pred CCCCc--HHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCCC-CCcCHHHHhccCceEEeccee
Confidence 76554 77888888877 89999999998 6788899999997 9999998764211 111111111 11111 10000
Q ss_pred -cCCCCC----CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 317 -GNYKPR----TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 317 -~~~~~~----~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
...... +.+.+++++++++.+.+..+..+.|+++++.++++.+.+++. .|+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 267 QGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred ecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 001111 124567889999988765556789999999999999887774 588875
No 87
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=4.8e-37 Score=287.78 Aligned_cols=314 Identities=23% Similarity=0.332 Sum_probs=253.3
Q ss_pred cchhhhccCCCC---eEEEEeecCCCCC-CeEEEEEeeeecCcccccccccCCCCC-C----CCccccccceEEEEEeCC
Q 017336 4 TAAAVAWEAGKP---LIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWESKGQTP-L----FPRIFGHEAAGVVESVGE 74 (373)
Q Consensus 4 ~~a~~~~~~~~~---~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~i~G~e~~G~V~~vG~ 74 (373)
|||+++...+.+ +++++.|.|.|.+ +||+||+.++++|++|+....|..+.. . +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999988875 7999999999988 999999999999999999887755422 2 577999999999999999
Q ss_pred CCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCce
Q 017336 75 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV 154 (373)
Q Consensus 75 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~ 154 (373)
++..|++||+|++... +.|+|++|+.++++.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence 9999999999985421 1259999999999999
Q ss_pred EeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh----hHHHHH
Q 017336 155 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEA 229 (373)
Q Consensus 155 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~----~~~~~~ 229 (373)
+++|+++++++++.+++.+.|||+++.....+.++++|||+|+ |.+|++++|+|+++|+ +++++.+++ ++++.+
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999999877788999999999987 9999999999999999 677776665 678888
Q ss_pred HhcCCceeecCCCC-CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcc
Q 017336 230 KKFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLN 307 (373)
Q Consensus 230 ~~lg~~~vi~~~~~-~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~ 307 (373)
+++|++.++++... ...+.+.++...++++|++|||+|+ ..+...+++++++ |+++.+|..... ...... ..+.+
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~ 268 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFK 268 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhC
Confidence 99999998877653 0126677777665589999999998 5667789999997 999999864322 222222 22458
Q ss_pred cceEEEEeccCCCC-------CCCHHHHHHHHHcCCCCCCCceeeee---ccccHHHHHHHHHcCCc-eeEEEec
Q 017336 308 ERTLKGTFFGNYKP-------RTDLPSVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 308 ~~~i~g~~~~~~~~-------~~~~~~~~~~l~~~~l~~~~~~~~~~---~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
+.++.+........ .+.+.++++++.++.+.+. ....+ +++++++|++.+.+++. .|+++.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 88888876543211 0147778888889987654 44556 99999999999987775 4888764
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=8.3e-37 Score=285.53 Aligned_cols=308 Identities=17% Similarity=0.185 Sum_probs=243.9
Q ss_pred chhhhccC---CCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCC
Q 017336 5 AAAVAWEA---GKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL 79 (373)
Q Consensus 5 ~a~~~~~~---~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 79 (373)
||+++..+ +++ +++.++|.|+|+++||+|||+++++|+.|+..+.+..+...+|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 56777775 443 7888999999999999999999999999998887765555678899999999999999999999
Q ss_pred CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336 80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
++||+|+.... ....|+|++|+.++++.++++|+
T Consensus 81 ~~Gd~V~~~~~----------------------------------------------~~~~g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD----------------------------------------------IDRPGSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC----------------------------------------------CCCCCcccceEEEcHHHcccCCC
Confidence 99999985410 00136999999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCC-----CCEEEEECC-CHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhc
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF 232 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~G~-g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~l 232 (373)
++++++++.+++++.|||+++....++.+ +++|||+|+ |.+|++++|+|+++ |+ +|+++.+++++.+.++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999999877788776 999999986 99999999999998 99 899998889999999999
Q ss_pred CCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceE
Q 017336 233 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTL 311 (373)
Q Consensus 233 g~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i 311 (373)
|+++++++.. + +.+.+++..++++|+++|++++......++++++++ |+++.++.. ..+. ...+. ++.++
T Consensus 194 g~~~~~~~~~-~--~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~~~~--~~~~~~~~~~~ 264 (336)
T TIGR02817 194 GAHHVIDHSK-P--LKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---AELD--ISPFKRKSISL 264 (336)
T ss_pred CCCEEEECCC-C--HHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---cccc--chhhhhcceEE
Confidence 9999887654 2 777777754448999999987768889999999997 999988532 1122 22222 44555
Q ss_pred EEEeccC--CCC-------CCCHHHHHHHHHcCCCCCCCceeeee---ccccHHHHHHHHHcCCc-eeEEEe
Q 017336 312 KGTFFGN--YKP-------RTDLPSVVDMYMNKQLELEKFITHRI---PFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 312 ~g~~~~~--~~~-------~~~~~~~~~~l~~~~l~~~~~~~~~~---~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
.+..+.. ... .+.++++++++.++.+.+. +.+.+ +++++++|++.+.+++. +|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 5433221 000 0236778899999977542 34445 46899999999988775 477764
No 89
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=5.3e-36 Score=278.51 Aligned_cols=312 Identities=20% Similarity=0.227 Sum_probs=253.4
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD 78 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~ 78 (373)
|||+++.+++.+ +++.+.+.|.+.++||+|++.++++|++|+....|..+ ....|.++|||++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 688888776653 66777778888999999999999999999988877543 2345788999999999999999999
Q ss_pred CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336 79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 158 (373)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 158 (373)
+++||+|++... ...|+|++|+.++++.++++|
T Consensus 81 ~~~Gd~V~~~~~-----------------------------------------------~~~g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTG-----------------------------------------------RAGGGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccC-----------------------------------------------CCCceeeEEEEEchHHeEeCC
Confidence 999999986521 013699999999999999999
Q ss_pred CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336 159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237 (373)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v 237 (373)
+++++.+++.+++.+.||| ++.+.+.++++++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 9999999999999999995 4677888999999999986 9999999999999999 79999899999999999999888
Q ss_pred ecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEe
Q 017336 238 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTF 315 (373)
Q Consensus 238 i~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 315 (373)
++....+ +.+.+.+.+++ ++|+++|++|+ .....++++++++ |+++.+|...... ...+. ..+.++.++.++.
T Consensus 192 ~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08244 192 VDYTRPD--WPDQVREALGGGGVTVVLDGVGG-AIGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLL 266 (324)
T ss_pred EecCCcc--HHHHHHHHcCCCCceEEEECCCh-HhHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEee
Confidence 8766544 77777777776 89999999998 4668999999997 9999998765332 23332 2244788888776
Q ss_pred ccCCCC---CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 316 FGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 316 ~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
...... .+.+.++++++.++.+.. ++.+.|+++++++|++.+.+++. .|+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 267 GVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 543211 134667888888887653 36789999999999999988775 4888753
No 90
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.9e-36 Score=278.28 Aligned_cols=329 Identities=26% Similarity=0.349 Sum_probs=265.1
Q ss_pred cchhhhccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++...+ ..+++++.+.|.++++|++|++.++++|++|+....|.++. ...|.++|||++|+|+++|+.++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899998765 33888888888899999999999999999999988775542 34678899999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|++.....|+.+.+| .|...... | ....|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~------~~~~~~~~---~-------------------~~~~g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPT------AEDEASAL---G-------------------GPIDGVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEeccccccccccc------cccccccc---c-------------------cccCceeeeEEEecHHHeEECCCC
Confidence 9999998776666544333 33211000 1 112368999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
+++.+++.+++.+.+||+++...+.++++++|+|+|+|++|++++++++.+|+ +|++++.++++++.++++|.+.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999998777889999999999889999999999999999 79999899999999999999888876
Q ss_pred CC-CCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336 241 SE-HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 318 (373)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 318 (373)
.. .+ +.+.+.+.+++ ++|+++|++++ .....++++++++ |+++.+|..............+.+++++.+.....
T Consensus 212 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T cd08276 212 RTTPD--WGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS 287 (336)
T ss_pred CcccC--HHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc
Confidence 55 33 77778888876 89999999986 7788999999997 99999987653321111122345888888876543
Q ss_pred CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 319 YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
.+.+.++++++.++.+... ..+.|++++++++++.+.+++. .|++++
T Consensus 288 ---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 288 ---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred ---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 3467888888888866543 5688999999999999887765 488775
No 91
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=6.4e-36 Score=278.72 Aligned_cols=311 Identities=25% Similarity=0.312 Sum_probs=251.6
Q ss_pred ccchhhhccCCC----CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCC
Q 017336 3 STAAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS 77 (373)
Q Consensus 3 ~~~a~~~~~~~~----~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~ 77 (373)
+|||+++.+++. ++++++.+.|.+.++|++||+.++++|+.|+....|..+. ..+|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 589999888666 4889999999999999999999999999999887776542 45788999999999999999999
Q ss_pred CCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336 78 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 157 (373)
Q Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~ 157 (373)
.+++||+|++.. .|+|++|+.++++.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence 999999998541 258999999999999999
Q ss_pred CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336 158 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 236 (373)
Q Consensus 158 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~ 236 (373)
|++ +.+++.+++++.|||+++.+...+.++++|+|+|+ |.+|++++|+|+..|+ .|+++.+++++.+.++++|++.
T Consensus 111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 997 35677888899999999877788999999999986 9999999999999999 7888888899999999999988
Q ss_pred eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc---------eeeccchhhcc
Q 017336 237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---------VFMTKPINVLN 307 (373)
Q Consensus 237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~---------~~~~~~~~~~~ 307 (373)
+++....+ +.+.+....++++|++||++|+ ..+..++++++++ |+++.+|...... ...+....+.+
T Consensus 188 v~~~~~~~--~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T cd08250 188 PINYKTED--LGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK 263 (329)
T ss_pred EEeCCCcc--HHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence 87765544 6666666554589999999997 7889999999997 9999998754221 11122233457
Q ss_pred cceEEEEeccCCC--CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 308 ERTLKGTFFGNYK--PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 308 ~~~i~g~~~~~~~--~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
+.++.++...... ..+.+.++++++.++.+.+.....+.++++++++|++.+.+++. .|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred CceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 7888887643221 12346778888889877653334566899999999999987765 477753
No 92
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=9.3e-36 Score=257.61 Aligned_cols=296 Identities=18% Similarity=0.287 Sum_probs=240.7
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccce----EEEEEeCCCCCCCCCCCEEeecCcC
Q 017336 16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA----GVVESVGEGVSDLEVGDHVLPVFTG 91 (373)
Q Consensus 16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~----G~V~~vG~~v~~~~~Gd~V~~~~~~ 91 (373)
+++++.++|+|++||||||..|.+++|. .+.+....+..-.|.-+|-..+ |+|++ |+.+.|++||.|...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~--S~~~~f~~GD~V~~~--- 100 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSYAPPVELGEVMVGGTVAKVVA--SNHPGFQPGDIVVGV--- 100 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCcccCCCcCCCceeECCeeEEEEe--cCCCCCCCCCEEEec---
Confidence 8999999999999999999999999983 2222222233334555555554 44544 677889999999844
Q ss_pred CCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh--hhhc
Q 017336 92 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCIL 169 (373)
Q Consensus 92 ~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~--aa~~ 169 (373)
.+|+||..++.+.+.+++++.-+.. ...+
T Consensus 101 -------------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvL 131 (340)
T COG2130 101 -------------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVL 131 (340)
T ss_pred -------------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhc
Confidence 2899999999999999986643222 3346
Q ss_pred ccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccH
Q 017336 170 SCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPI 247 (373)
Q Consensus 170 ~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~ 247 (373)
..+..|||.+|++.+++++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+++.+ +|.+.+|||+..+ +
T Consensus 132 GmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~ 208 (340)
T COG2130 132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--F 208 (340)
T ss_pred CCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--H
Confidence 7789999999999999999999999987 9999999999999999 99999999999999988 9999999999987 9
Q ss_pred HHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce--ee--cc--chhhcccceEEEEec-cCCC
Q 017336 248 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--FM--TK--PINVLNERTLKGTFF-GNYK 320 (373)
Q Consensus 248 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~--~~--~~--~~~~~~~~~i~g~~~-~~~~ 320 (373)
.+.+++..+.|+|+.||++|+ +.++..+..|+.. +|++.||..+.-.. .. .. +..+.+.+++.|+.. ..+.
T Consensus 209 ~~~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~ 286 (340)
T COG2130 209 AQALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD 286 (340)
T ss_pred HHHHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhh
Confidence 999999999999999999999 8999999999996 99999998654221 11 11 122337899999887 3332
Q ss_pred CC--CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEEecCC
Q 017336 321 PR--TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISMED 373 (373)
Q Consensus 321 ~~--~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~~~~~ 373 (373)
.+ +..+++.+++++|+|+.+. +..-.|+.+++||..|.++++. |.|+++.+
T Consensus 287 ~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 287 QRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 22 4578899999999998874 5566899999999999999975 99998764
No 93
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.7e-35 Score=274.91 Aligned_cols=314 Identities=19% Similarity=0.271 Sum_probs=252.8
Q ss_pred ccchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCC
Q 017336 3 STAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL 79 (373)
Q Consensus 3 ~~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~ 79 (373)
+|||+++.+.+.. +++.+.+.|.+.++||+|||.++++|+.|+....+..+ ....|.++|+|++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 5999999887763 67778888889999999999999999999888776543 23456789999999999999999999
Q ss_pred CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336 80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
++||+|+... ..|+|++|+++++++++++|+
T Consensus 81 ~~Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALL-------------------------------------------------PGGGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEec-------------------------------------------------CCCceeeEEEecHHHcEeCCC
Confidence 9999998431 125899999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi 238 (373)
++++.+++.+++++.+||+++.....+.++++|||+|+ |.+|++++++|+.+|+ +++++.+++++.+.++++|++.++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999999877788999999999986 9999999999999999 667788899999999999998888
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceee-ccchhh-cccceEEEEe
Q 017336 239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM-TKPINV-LNERTLKGTF 315 (373)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~-~~~~~~-~~~~~i~g~~ 315 (373)
+....+ .+.+.+.+.+++ ++|++||++++ ..+..++++++++ |+++.+|..... .+. +....+ .++.++.++.
T Consensus 191 ~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (334)
T PTZ00354 191 RYPDEE-GFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGGA-KVEKFNLLPLLRKRASIIFST 266 (334)
T ss_pred ecCChh-HHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCCC-cccccCHHHHHhhCCEEEeee
Confidence 764431 266677777765 89999999987 7889999999997 999999865422 222 333323 3666777765
Q ss_pred ccCCCCC-------CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336 316 FGNYKPR-------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 372 (373)
Q Consensus 316 ~~~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~ 372 (373)
....... +.++++++++.++.+.. ++.+.+++++++++++.+.+++. .|+++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 267 LRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 4332211 12356778888887653 36788999999999999887764 58888764
No 94
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=1.6e-35 Score=277.15 Aligned_cols=315 Identities=23% Similarity=0.312 Sum_probs=245.6
Q ss_pred cchhhhccCC-CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 4 TAAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 4 ~~a~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
|||+++..++ ..+++++.+.|.|+++||+|++.++++|++|+....+.. ...+|.++|+|++|+|+.+|++++.|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 6899988874 338899999999999999999999999999998775543 22357789999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|+..+...|+ | ..+.|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~----------------------~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP----------------------N-------------------DPRNGAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC----------------------C-------------------CCCCCcccceEEechhheEECCCCCC
Confidence 999976432211 0 11236999999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCC----------CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKP----------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 231 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~----------~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~ 231 (373)
+++++.+++.+.|||+++.+...+ .++++|||+|+ |.+|++++++|+.+|+ +|+++. ++++.+.+++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999987666544 78999999997 8999999999999999 777776 5688899999
Q ss_pred cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhc--CCcEEEEEcCCCCCceeeccchhhcccc
Q 017336 232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD--GWGVAVLVGVPSKDAVFMTKPINVLNER 309 (373)
Q Consensus 232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~~g~~v~~g~~~~~~~~~~~~~~~~~~~ 309 (373)
+|++.+++....+ +.+.+++.+++++|++||++|++..+..+++++++ + |+++.+|.......+ .... ...
T Consensus 197 ~g~~~v~~~~~~~--~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~~~---~~~~-~~~ 269 (339)
T cd08249 197 LGADAVFDYHDPD--VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEETEP---RKGV-KVK 269 (339)
T ss_pred cCCCEEEECCCch--HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccccC---CCCc-eEE
Confidence 9998888876654 77778777766899999999986788999999999 8 999999876432200 0000 111
Q ss_pred eEEEEeccC------CCCCCCHHHHHHHHHcCCCCCCCceeeeec--cccHHHHHHHHHcCC-c-eeEEEec
Q 017336 310 TLKGTFFGN------YKPRTDLPSVVDMYMNKQLELEKFITHRIP--FSEINKAFEYMVKGE-G-LRCIISM 371 (373)
Q Consensus 310 ~i~g~~~~~------~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--l~~~~~a~~~l~~~~-~-~k~v~~~ 371 (373)
.+....+.. ......++.+++++.++++.+. ....++ ++++++|++.+.+++ . .|+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 270 FVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 111111110 0111236678888889987765 345566 999999999998887 5 4888864
No 95
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=3.5e-35 Score=273.16 Aligned_cols=313 Identities=19% Similarity=0.239 Sum_probs=241.3
Q ss_pred cchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++..+++ ++++++.+.|.++++||+|++.++++|++|+..+.|..+. ..+|.++|||++|+|+++ +++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 68999988886 6999999999999999999999999999999988876532 345789999999999998 456799
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|+..... .|+ ...|+|++|+.++++.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~g~-------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGYD------------------------LGM-------------------NTDGGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEcccc------------------------cCC-------------------CCCceeEEEEEEchhhEEECCCC
Confidence 99999964210 011 11369999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhcc--CCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336 161 APLDKVCILSCGVSTGLGATLNVA--KPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 236 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~--~~~-~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~ 236 (373)
+++++++.+++.+.+||.++.... ++. .+++|||+|+ |.+|++++|+|+.+|+ +|+++++++++++.++++|++.
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 999999999999999999875543 335 3579999998 9999999999999999 6999999999999999999988
Q ss_pred eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEe
Q 017336 237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 315 (373)
Q Consensus 237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 315 (373)
+++.... .....+....+++|++||++|+ ..+..++++++++ |+++.+|...... .......+ .++.++.+..
T Consensus 195 ~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd05280 195 VLDREDL---LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGPE-LTTTVLPFILRGVSLLGID 268 (325)
T ss_pred EEcchhH---HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCCc-cccccchheeeeeEEEEEE
Confidence 8875432 1122222333379999999998 7889999999997 9999998764322 13333334 4888888876
Q ss_pred ccCCCCC---CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 316 FGNYKPR---TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 316 ~~~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
....... +.++.+..++..+. .+.+...|+++++++|++.+.+++. +|+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 269 SVNCPMELRKQVWQKLATEWKPDL---LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eecCchhHHHHHHHHHHHHHhcCC---ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 5432211 11233444444442 2347789999999999999988775 4888764
No 96
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=9.1e-36 Score=274.59 Aligned_cols=301 Identities=28% Similarity=0.429 Sum_probs=227.2
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCC----CCCccccccceEEE---EEeC-CCCCCCCCCCEEee
Q 017336 16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP----LFPRIFGHEAAGVV---ESVG-EGVSDLEVGDHVLP 87 (373)
Q Consensus 16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~----~~p~i~G~e~~G~V---~~vG-~~v~~~~~Gd~V~~ 87 (373)
+...+.++|.|++++++|++.++++|+.|++++.|.+... .+|.+++.++.|.+ ...| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 5568999999999999999999999999999999877654 36766666665553 3333 22334555555542
Q ss_pred cCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhh
Q 017336 88 VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC 167 (373)
Q Consensus 88 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa 167 (373)
. ...|+|+||+.+|+..++++|++++++++|
T Consensus 100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2 123699999999999999999999999999
Q ss_pred hcccchhhhhhhhhhcc------CCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 168 ILSCGVSTGLGATLNVA------KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 168 ~~~~~~~ta~~~l~~~~------~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
++|.+..|||.++...+ +.+++++|||+|+ |++|++++|+|+..|+ ..+++.+++++.++++++|++.++|+
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999988 8999999999976 8999999999999996 45555589999999999999999999
Q ss_pred CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCC-ceeeccchh-hcccce-----EEE
Q 017336 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPIN-VLNERT-----LKG 313 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~-~~~~~~~~~-~~~~~~-----i~g 313 (373)
++.+ +.+.++..++++||+||||+|+ ........++... |+...++..... ......... ..+.+. +.+
T Consensus 210 ~~~~--~~e~~kk~~~~~~DvVlD~vg~-~~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (347)
T KOG1198|consen 210 KDEN--VVELIKKYTGKGVDVVLDCVGG-STLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKG 285 (347)
T ss_pred CCHH--HHHHHHhhcCCCccEEEECCCC-CccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeec
Confidence 9976 9999999884599999999999 4667777888875 754444443311 111111000 011111 111
Q ss_pred Ee---ccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336 314 TF---FGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 372 (373)
Q Consensus 314 ~~---~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~ 372 (373)
.. .......+.+..+.+++.++++ ++.+.+.||++++.+|++.+.+++. +|+++.++
T Consensus 286 ~~~~~~~~~~~~~~l~~l~~~ie~gki--kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 286 VNYRWLYFVPSAEYLKALVELIEKGKI--KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred cceeeeeecCCHHHHHHHHHHHHcCcc--cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 10 0111223457888999999955 5568999999999999999988664 69998875
No 97
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.7e-34 Score=267.08 Aligned_cols=297 Identities=25% Similarity=0.357 Sum_probs=239.4
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCccccccc-ccCCCC--CCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCC
Q 017336 16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQT--PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE 92 (373)
Q Consensus 16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 92 (373)
+++.+++.|+++++||+|++.++++|++|+..+ .+..+. ..+|.++|+|++|+|+++|++++.+++||+|+...
T Consensus 7 ~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~--- 83 (312)
T cd08269 7 FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS--- 83 (312)
T ss_pred eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec---
Confidence 899999999999999999999999999999877 654321 22478899999999999999999999999998541
Q ss_pred CCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccc
Q 017336 93 CGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCG 172 (373)
Q Consensus 93 ~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~ 172 (373)
.|+|++|+.++++.++++|+++ ..++.+..+
T Consensus 84 -----------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~ 114 (312)
T cd08269 84 -----------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEP 114 (312)
T ss_pred -----------------------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhhh
Confidence 2589999999999999999998 233322367
Q ss_pred hhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHH
Q 017336 173 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 252 (373)
Q Consensus 173 ~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~ 252 (373)
++++++++. ...++++++|||+|+|.+|.+++|+|+++|++.|+++.+++++.++++++|++.+++....+ +.+.+.
T Consensus 115 ~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~l~ 191 (312)
T cd08269 115 LGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--IVERVR 191 (312)
T ss_pred HHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcC--HHHHHH
Confidence 888998765 78899999999998899999999999999994489998899999999999998888765544 778888
Q ss_pred HHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEeccCCC-CCCCHHHHH
Q 017336 253 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYK-PRTDLPSVV 329 (373)
Q Consensus 253 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~-~~~~~~~~~ 329 (373)
+.+++ ++|+++||+|+......++++|+++ |+++.+|... .....+.... ..++..+.++...... ..+.+++++
T Consensus 192 ~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (312)
T cd08269 192 ELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAV 269 (312)
T ss_pred HHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHH
Confidence 87776 8999999998867889999999997 9999998654 2222222222 3366777665432221 124688899
Q ss_pred HHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc--eeEEE
Q 017336 330 DMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG--LRCII 369 (373)
Q Consensus 330 ~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~--~k~v~ 369 (373)
+++.++.+.+..++.+.|+++++++|++.+.+++. +|+++
T Consensus 270 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 270 KLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 99999988764456788999999999999988863 58876
No 98
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=6.8e-35 Score=270.96 Aligned_cols=298 Identities=21% Similarity=0.325 Sum_probs=247.1
Q ss_pred eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCC
Q 017336 16 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECG 94 (373)
Q Consensus 16 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~ 94 (373)
+++++.+.|.+.+++|+|++.++++|+.|+..+.+.... ..+|.++|+|++|+|+.+|++++.+++||+|++.+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888999999999999999999999887765432 346789999999999999999999999999996520
Q ss_pred CCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchh
Q 017336 95 DCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 174 (373)
Q Consensus 95 ~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ 174 (373)
.|+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 90 ---------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 25899999999999999999999999999999999
Q ss_pred hhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHH
Q 017336 175 TGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 253 (373)
Q Consensus 175 ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~ 253 (373)
+||+++...+.+.++++|||+|+ |.+|++++++|+++|+ +++++.+++++.+.++++|++.++++...+ +.+.+.+
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHH
Confidence 99999877788899999999987 8999999999999999 788888888999999999999888876544 7777888
Q ss_pred HcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCC-------CCC
Q 017336 254 MTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP-------RTD 324 (373)
Q Consensus 254 ~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~ 324 (373)
.+++ ++|++|||+|+ .....++++++++ |+++.+|..... ...+....+. ++.++.+.....+.. .+.
T Consensus 202 ~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (323)
T cd05282 202 ATGGAGARLALDAVGG-ESATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET 278 (323)
T ss_pred HhcCCCceEEEECCCC-HHHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence 8776 89999999998 5567889999997 999999876533 3334444444 788888876544321 124
Q ss_pred HHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 325 LPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 325 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
+.++++++.++.+.+. +.+.|+++++++|++.+.+++. .|++++
T Consensus 279 ~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 279 FAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 6778888889877643 6788999999999999987765 477753
No 99
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.8e-35 Score=268.47 Aligned_cols=297 Identities=25% Similarity=0.310 Sum_probs=239.3
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
|||+++...+ | +++++.+.|.++++||+|++.++++|+.|+....+ ...|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~ 75 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAV 75 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCC
Confidence 5888887654 3 67779999999999999999999999999987652 223678999999999999999999999
Q ss_pred CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
||+|+... ..|+|++|+.++++.++++|+++
T Consensus 76 Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~~~ 106 (305)
T cd08270 76 GARVVGLG-------------------------------------------------AMGAWAELVAVPTGWLAVLPDGV 106 (305)
T ss_pred CCEEEEec-------------------------------------------------CCcceeeEEEEchHHeEECCCCC
Confidence 99998541 12599999999999999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
++.+++++++.+.|||+++...... ++++|+|+|+ |.+|++++++|+.+|+ +|+.+++++++.+.++++|++.+++.
T Consensus 107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 184 (305)
T cd08270 107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG 184 (305)
T ss_pred CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 9999999999999999987665544 5999999998 9999999999999999 79999899999999999998765532
Q ss_pred CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc---ccceEEEEecc
Q 017336 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL---NERTLKGTFFG 317 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~---~~~~i~g~~~~ 317 (373)
.. +..++++|+++|++|+ .....++++++.+ |+++.+|... ..........+. ++.++.++.+.
T Consensus 185 ~~----------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (305)
T cd08270 185 GS----------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY 251 (305)
T ss_pred cc----------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence 22 1122479999999998 5789999999997 9999998754 222222333232 47788877654
Q ss_pred C-CCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 318 N-YKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 318 ~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
. ....+.+..+++++.++++.+. +.+.++++++++|++.+.+++. +|+++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 252 DGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred CHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 3 1112357788899999988643 6789999999999999987775 4888764
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=8.1e-35 Score=269.87 Aligned_cols=311 Identities=23% Similarity=0.360 Sum_probs=246.8
Q ss_pred cchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336 4 TAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 4 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
||++++...+. .+++.+.+.|.++++||+||+.++++|+.|+....+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 57888776654 267778888889999999999999999999998887655556688999999999999995 57999
Q ss_pred CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
||+|++... |+. ....|+|++|+.++++.++++|+++
T Consensus 79 Gd~V~~~~~--------------------------~~~-----------------~~~~g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMG--------------------------GMG-----------------RTFDGSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecC--------------------------CCC-----------------CCCCcccceEEEcCHHHcEeCCCCC
Confidence 999986521 000 0012699999999999999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
++++++.+++++.|||+++.....+.++++|||+|+ |.+|++++|+|+.+|+ +|+++.+++++.+.++++|++.+++.
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999999888788999999999997 9999999999999999 79999889999999999999887654
Q ss_pred CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceee----ccchhhcccceEEEEec
Q 017336 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM----TKPINVLNERTLKGTFF 316 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~----~~~~~~~~~~~i~g~~~ 316 (373)
..+ +.+.+.+. ++++|+++|++|+ ..+..++++++++ |+++.+|......... .....+.++.++.++..
T Consensus 195 -~~~--~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 195 -DGA--IAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred -Ccc--HHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 222 66777777 4589999999998 7889999999997 9999999753322111 11111246666666543
Q ss_pred cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEE
Q 017336 317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII 369 (373)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~ 369 (373)
... ..+.+.+++++++++.+.+ ...+.|+++++++|++.+.+++.. |+++
T Consensus 269 ~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 269 GDV-PQTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhh-hHHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 221 1234778889999997754 366889999999999999877653 6654
No 101
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=4.3e-34 Score=267.16 Aligned_cols=311 Identities=18% Similarity=0.198 Sum_probs=248.1
Q ss_pred cchhhhccCCCC-----eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCC
Q 017336 4 TAAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD 78 (373)
Q Consensus 4 ~~a~~~~~~~~~-----~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 78 (373)
|||+++.+++.+ +++++.+.|.+.+++|+|++.++++|++|+....+..+...+|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 588998888764 566678888889999999999999999999887775544456778999999999999999999
Q ss_pred CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336 79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 158 (373)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 158 (373)
|++||+|+... .. ...|+|++|+.++.++++++|
T Consensus 81 ~~~Gd~V~~~~----------------------------~~------------------~~~g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAG----------------------------DI------------------TRPGSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcC----------------------------CC------------------CCCccceEEEEEchHHeeeCC
Confidence 99999998541 00 012599999999999999999
Q ss_pred CCCCchhhhhcccchhhhhhhhhhccCCCC-----CCEEEEECC-CHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh
Q 017336 159 PLAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK 231 (373)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----~~~vlI~G~-g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~ 231 (373)
+++++++++.+++.+.+||+++.+.+.+.+ +++|+|+|+ |.+|++++|+|+.+| + +|+++++++++.+.+++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998877788877 999999986 999999999999999 7 89999899999999999
Q ss_pred cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccce
Q 017336 232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERT 310 (373)
Q Consensus 232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~ 310 (373)
+|++.+++... + +.+.+....++++|++||++|+...+..++++++++ |+++.+|... . ......+ .++.+
T Consensus 194 ~g~~~~~~~~~-~--~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~--~~~~~~~~~~~~~ 265 (336)
T cd08252 194 LGADHVINHHQ-D--LAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--E--PLDLGPLKSKSAS 265 (336)
T ss_pred cCCcEEEeCCc-c--HHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--C--cccchhhhcccce
Confidence 99988887653 2 656666443348999999999767889999999997 9999998652 1 2222333 46777
Q ss_pred EEEEeccCCC--C-------CCCHHHHHHHHHcCCCCCCCc-eeeeeccccHHHHHHHHHcCCce-eEEE
Q 017336 311 LKGTFFGNYK--P-------RTDLPSVVDMYMNKQLELEKF-ITHRIPFSEINKAFEYMVKGEGL-RCII 369 (373)
Q Consensus 311 i~g~~~~~~~--~-------~~~~~~~~~~l~~~~l~~~~~-~~~~~~l~~~~~a~~~l~~~~~~-k~v~ 369 (373)
+.+..+.... . .+.+.++++++.++.+.+... ....++++++++|++.+.++... |+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 335 (336)
T cd08252 266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVL 335 (336)
T ss_pred EEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEe
Confidence 7765543211 0 123677888999997764311 12457999999999999887754 7765
No 102
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=3.4e-34 Score=266.74 Aligned_cols=314 Identities=19% Similarity=0.205 Sum_probs=237.8
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCC-CCCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++...+++ +++++.+.|.|+++||+||+.++++|++|.....+.+ ....+|.++|||++|+|+++| +..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 789998887764 7789999999999999999999999999987654322 223458899999999999954 56799
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|+..+.. .|. ...|+|++|+.++++.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~-------------------~~~g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGV-------------------SHHGGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCC-------------------CCCCcceeEEEEcHHHeEECCCC
Confidence 99999865310 010 12369999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhc--cC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336 161 APLDKVCILSCGVSTGLGATLNV--AK-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 236 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~--~~-~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~ 236 (373)
+++++++.+++.+.|||.++... .. ...+++|||+|+ |.+|++++|+|+++|+ +|+++++++++.+.++++|++.
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999999876533 23 345789999998 9999999999999999 7999989999999999999988
Q ss_pred eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEe
Q 017336 237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 315 (373)
Q Consensus 237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 315 (373)
+++.++. ..+.+.+..++++|++||++|+ ..+..++++++++ |+++.+|.... .........+ .++.++.+..
T Consensus 195 v~~~~~~---~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08289 195 VIPREEL---QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGID 268 (326)
T ss_pred EEcchhH---HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEE
Confidence 8876542 2344555544489999999998 7889999999997 99999997632 2223223333 5888888865
Q ss_pred ccCCCCCCCHHHHHHHHHcCCCC---CCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 316 FGNYKPRTDLPSVVDMYMNKQLE---LEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~l~---~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
..... .....++++.+.. .+. ....+.+.|+++++.+|++.+.+++. .|+++++
T Consensus 269 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 269 SVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred eEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 32211 1122333333332 221 12235899999999999999988775 4888763
No 103
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=8.5e-34 Score=263.75 Aligned_cols=311 Identities=19% Similarity=0.234 Sum_probs=239.4
Q ss_pred chhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 017336 5 AAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 5 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
||+++...+.+ +++++.|.|.++++||+||+.++++|++|+....|.++. ..+|.++|||++|+|+. +++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 57777777775 689999999999999999999999999999888776532 34588999999999998 56678999
Q ss_pred CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
||+|++.+.. . | ....|+|++|+.++++.++++|+++
T Consensus 79 Gd~V~~~~~~------~------------------~-------------------~~~~g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------L------------------G-------------------VSHDGGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------C------------------C-------------------CCCCccceEEEEEchhheEECCCCC
Confidence 9999865210 0 0 0013699999999999999999999
Q ss_pred Cchhhhhcccchhhhhhhhhhc--cCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336 162 PLDKVCILSCGVSTGLGATLNV--AKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~--~~~~~~~-~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v 237 (373)
++++++.+++.+.+|+.++... +.+.+++ +|||+|+ |.+|++++++|+.+|+ +++++..++++++.++++|++.+
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999999999998875433 4478898 9999997 9999999999999999 67777788888899999999888
Q ss_pred ecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEec
Q 017336 238 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF 316 (373)
Q Consensus 238 i~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 316 (373)
++..+.+ ..++....+++|+++||+|+ +.+..++++++++ |+++.+|.... .........+ .++.++.+...
T Consensus 195 ~~~~~~~----~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 267 (323)
T TIGR02823 195 IDREDLS----PPGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDS 267 (323)
T ss_pred EccccHH----HHHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEec
Confidence 8764422 23444554579999999998 5788999999997 99999997642 2222222333 57888888654
Q ss_pred cCCCCC---CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEEec
Q 017336 317 GNYKPR---TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISM 371 (373)
Q Consensus 317 ~~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~~~ 371 (373)
...... +.+..+.+++..+.+.. +.+.|+++++++|++.+.+++.. |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 268 VYCPMALREAAWQRLATDLKPRNLES---ITREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred cccCchhHHHHHHHHHHHhhcCCCcC---ceeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 321111 12445555666665532 35689999999999999887754 888753
No 104
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=4.1e-34 Score=268.83 Aligned_cols=308 Identities=22% Similarity=0.329 Sum_probs=237.4
Q ss_pred cchhhhccCCCC---eEEEEeecCCC-CCCeEEEEEeeeecCcccccccccCCC---------------CCCCCcccccc
Q 017336 4 TAAAVAWEAGKP---LIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ---------------TPLFPRIFGHE 64 (373)
Q Consensus 4 ~~a~~~~~~~~~---~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~i~G~e 64 (373)
|||+++++++++ +++++.++|.| +++||+|+++++++|++|+....|... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 788888888875 88999999999 499999999999999999988776421 24568899999
Q ss_pred ceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCccee
Q 017336 65 AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFS 144 (373)
Q Consensus 65 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a 144 (373)
++|+|+.+|++++.+++||+|+..+.. ...|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999864210 1236999
Q ss_pred eEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCC----CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE
Q 017336 145 EYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER----GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV 219 (373)
Q Consensus 145 ~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~----~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~ 219 (373)
+|+.++++.++++|++++++.++.+++.+.|||+++.+.+.+.+ +++|+|+|+ |.+|++++++|+.+|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999998777777654 999999986 9999999999999999 67777
Q ss_pred cCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCce--
Q 017336 220 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-- 297 (373)
Q Consensus 220 ~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~-- 297 (373)
.++ ++.+.++++|.+.+++....+ +.+.+... +++|++||++|+ .....++++++++ |+++.+|.......
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~--~~vd~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~ 266 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNNED--FEEELTER--GKFDVILDTVGG-DTEKWALKLLKKG-GTYVTLVSPLLKNTDK 266 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCChh--HHHHHHhc--CCCCEEEECCCh-HHHHHHHHHhccC-CEEEEecCCccccccc
Confidence 654 677888999998888765533 54444332 379999999998 4888999999997 99999986431111
Q ss_pred eec--c----chhhc-c-------cceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCC
Q 017336 298 FMT--K----PINVL-N-------ERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGE 363 (373)
Q Consensus 298 ~~~--~----~~~~~-~-------~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~ 363 (373)
... . ...+. . ...+.... .....+.+.++++++.++.+.+ ++++.|+++++++|++.+.+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~ 342 (350)
T cd08248 267 LGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF--FSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGH 342 (350)
T ss_pred ccccchhhhhHHHHHHHHHHHHhcCCCeeEEE--ECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCC
Confidence 011 0 00010 0 00000000 0111235788999999997653 3678999999999999998776
Q ss_pred c-eeEEE
Q 017336 364 G-LRCII 369 (373)
Q Consensus 364 ~-~k~v~ 369 (373)
. .|+++
T Consensus 343 ~~~~vv~ 349 (350)
T cd08248 343 ARGKTVI 349 (350)
T ss_pred CceEEEe
Confidence 5 47765
No 105
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=9e-33 Score=255.51 Aligned_cols=308 Identities=25% Similarity=0.318 Sum_probs=247.3
Q ss_pred chhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Q 017336 5 AAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG 82 (373)
Q Consensus 5 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 82 (373)
||+.+...+.+ +++.+.+.|.++++||+|+|.++++|+.|+....+..+. .+|.++|||++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 45555555543 567777777889999999999999999999887775443 457789999999999999999999999
Q ss_pred CEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCC
Q 017336 83 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP 162 (373)
Q Consensus 83 d~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~ 162 (373)
|+|++.. ..|+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------------------------PPGAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------------------------CCCceeEEEEecHHHceeCCCCCC
Confidence 9998541 025899999999999999999999
Q ss_pred chhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCC
Q 017336 163 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 241 (373)
Q Consensus 163 ~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~ 241 (373)
..+++.+++.+.++|+++.+...+.++++|||+|+ |.+|++++++++.+|+ .|+++++++++.+.++++|++.+++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999999899999998877888999999999996 9999999999999999 789998999999999999998887765
Q ss_pred CCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCC
Q 017336 242 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY 319 (373)
Q Consensus 242 ~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 319 (373)
..+ +.+.++..+.+ ++|++++|+++ .....++++++++ |+++.+|..... ...+....+ .+++++.+......
T Consensus 190 ~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 264 (320)
T cd05286 190 DED--FVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHY 264 (320)
T ss_pred chh--HHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhh
Confidence 543 77778777766 89999999998 6888999999997 999999875422 222223333 46777765443222
Q ss_pred CCC-----CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 320 KPR-----TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 320 ~~~-----~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
... +.+.++++++.++.+.+. ..+.|+++++++|++.+.++.. .|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 265 IATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 111 124567788888877643 6688999999999999987775 477765
No 106
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=7e-33 Score=256.97 Aligned_cols=315 Identities=27% Similarity=0.359 Sum_probs=250.7
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
||++++...+.+ +++.+.+.|.+.+++|+|++.++++|++|+....|..+ ....|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 578887776543 78889999999999999999999999999988777543 345788999999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|+..+. |.. ...|++++|+.++++.++++|++
T Consensus 81 ~Gd~v~~~~~--------------------------~~~------------------~~~g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNL--------------------------GWG------------------RRQGTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEecc--------------------------ccC------------------CCCcceeeEEEecHHHcEeCCCC
Confidence 9999986531 000 01368999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++.+++.+++++.+||+++.....+.++++|+|+|+ |.+|++++++++.+|+ +|+++++++++.+.+.++|++.+++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877789999999999986 9999999999999998 7999989999999999999988877
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchh-hcccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~ 317 (373)
....+ +.+.+.+.+.+ ++|++++++++ ......+++++++ |+++.+|...... ...... +.++.++.+....
T Consensus 196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08253 196 YRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSGGLRG--TIPINPLMAKEASIRGVLLY 269 (325)
T ss_pred CCCcC--HHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeecCCcC--CCChhHHHhcCceEEeeehh
Confidence 66544 66777777665 89999999998 5678889999997 9999998754211 222222 3466667665533
Q ss_pred CCCCC---CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 318 NYKPR---TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 318 ~~~~~---~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
..... +.+..+.+++.++.+.. ...+.|++++++++++.+.++.. .|+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 270 TATPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred hcCHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 22111 12445566777776543 36788999999999999987664 4887753
No 107
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=6.6e-33 Score=257.86 Aligned_cols=312 Identities=17% Similarity=0.195 Sum_probs=241.6
Q ss_pred cchhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++.+++. .+++++.|.|.|+++||+|++.++++|++|+....+.++ ...+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999988775 388999999999999999999999999999988777543 234578899999999998 7778899
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|++.... .| ....|+|++|++++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~--------------~~-----------------------------~~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG--------------VG-----------------------------ERHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc--------------CC-----------------------------CCCCCcceeEEEEchHHeeeCCCC
Confidence 99999864210 00 001368999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhh--hccCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce
Q 017336 161 APLDKVCILSCGVSTGLGATL--NVAKPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 236 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~ 236 (373)
+++++++.++..+++|+.++. +..... ++++|||+|+ |.+|++++|+|+.+|+ +|+++..++++.+.++++|++.
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999989999887643 123444 6789999998 9999999999999999 7888888999999999999988
Q ss_pred eecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEe
Q 017336 237 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF 315 (373)
Q Consensus 237 vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 315 (373)
++++++. ...++..+.+++|.++|++++ .....++..++.+ |+++.+|.... .........+ .++.++.+..
T Consensus 195 ~~~~~~~----~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08288 195 IIDRAEL----SEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGID 267 (324)
T ss_pred EEEcchh----hHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEE
Confidence 8877543 224555555578999999997 5677888889986 99999987532 1122233334 5888888875
Q ss_pred ccCCCC---CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEEec
Q 017336 316 FGNYKP---RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISM 371 (373)
Q Consensus 316 ~~~~~~---~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~~~ 371 (373)
...... .+.+..+++++.++.+.+ +.+.++++++++|++.+.+++.. |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 268 SVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred eecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 432221 123555666777776642 46899999999999999888754 888764
No 108
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=4.4e-33 Score=251.87 Aligned_cols=268 Identities=32% Similarity=0.502 Sum_probs=220.0
Q ss_pred eEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCc
Q 017336 30 EVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 108 (373)
Q Consensus 30 evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~ 108 (373)
||+|+|.++++|+.|+....+..+ ...+|.++|+|++|+|+++|++++.|++||+|+..+..+|++|++|.. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999998887654 345678999999999999999999999999999999999999999997 666
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCC
Q 017336 109 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 188 (373)
Q Consensus 109 ~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 188 (373)
...+. + ....|+|++|+.++.+.++++|+++++++++.+++++.+||+++.....+.+
T Consensus 77 ~~~~~---~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGIL---G-------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCEe---c-------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 54433 1 1124699999999999999999999999999999999999999877777799
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 267 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g 267 (373)
+++|||+|+|.+|++++++++..|. +|+++++++++.+.++++|++.+++....+ +.+.+. ...+ ++|+++++++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCC
Confidence 9999999986699999999999997 899999999999999999988887766544 555555 4444 8999999999
Q ss_pred ChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCCCCHHHHHHH
Q 017336 268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 331 (373)
Q Consensus 268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 331 (373)
+......++++++++ |+++.++..............+.+++++.++..+.+ .++++++++
T Consensus 211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred CHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 867788999999997 999999876543332223333458899988875432 245555543
No 109
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=4.8e-33 Score=259.32 Aligned_cols=304 Identities=19% Similarity=0.243 Sum_probs=238.5
Q ss_pred cchhhhccCCC------CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCC
Q 017336 4 TAAAVAWEAGK------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGE 74 (373)
Q Consensus 4 ~~a~~~~~~~~------~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~ 74 (373)
.||+++...++ .+++++.+.|.+.+++|+||+.++++|+.|.....+... ....+.++|+|++|+|+++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~ 81 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS 81 (329)
T ss_pred CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence 35666655442 288899999999999999999999999987655444321 112356789999999999996
Q ss_pred CCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEec-Cc
Q 017336 75 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GC 153 (373)
Q Consensus 75 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~-~~ 153 (373)
+ .+++||+|+.. ++|++|+.+++ +.
T Consensus 82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~ 107 (329)
T cd05288 82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG 107 (329)
T ss_pred C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence 4 79999999843 37999999999 99
Q ss_pred eEeCCCCCC--chhhhh-cccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336 154 VAKINPLAP--LDKVCI-LSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 229 (373)
Q Consensus 154 ~~~~p~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~ 229 (373)
++++|++++ +.+++. +++++.|||+++.....+.++++|||+|+ |.+|++++|+|+++|+ +|+++++++++.+.+
T Consensus 108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~ 186 (329)
T cd05288 108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL 186 (329)
T ss_pred cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 999999985 445555 88899999999877788999999999986 9999999999999999 899998999999999
Q ss_pred Hh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceee----c-cch
Q 017336 230 KK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM----T-KPI 303 (373)
Q Consensus 230 ~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~----~-~~~ 303 (373)
++ +|++.++++.+.+ +.+.+.+.+++++|++|||+|+ ..+..++++++++ |+++.+|......... + ...
T Consensus 187 ~~~~g~~~~~~~~~~~--~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 262 (329)
T cd05288 187 VEELGFDAAINYKTPD--LAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN 262 (329)
T ss_pred HhhcCCceEEecCChh--HHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence 88 9998888876544 7777777765689999999998 7888999999997 9999998754322211 1 222
Q ss_pred hhcccceEEEEeccCCCC--CCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336 304 NVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI 368 (373)
Q Consensus 304 ~~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v 368 (373)
.+.++.++.++.+..... .+.+.++++++.++.+.+. ....+++++++++++.+.+++.. |++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvv 328 (329)
T cd05288 263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYR--EDVVEGLENAPEAFLGLFTGKNTGKLV 328 (329)
T ss_pred HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccc--ccccccHHHHHHHHHHHhcCCCcccee
Confidence 345788888766433211 1346778889999987755 34568999999999999877653 665
No 110
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=1.2e-32 Score=254.98 Aligned_cols=308 Identities=25% Similarity=0.348 Sum_probs=248.9
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++.+.+.+ +++.+.+.|.+.+++|+||+.++++|+.|+....+.++ ...+|.++|||++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 689998876553 77788888888999999999999999999988766543 234678999999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|+.... .|+|++|+.++++.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALLA-------------------------------------------------GGGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEecC-------------------------------------------------CCceeEEEEcCHHHhccCCCC
Confidence 9999985410 158999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++.+++.++..+.++|+++.+.+.+.++++|+|+|+ |.+|++++++++..|+ +|+++++++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877788999999999997 8999999999999999 7999989999999999999887777
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 317 (373)
....+ +.+.+.+.+.+ ++|+++|+.|+ .....+++++.++ |+++.+|...... .......+ .+++++.++...
T Consensus 191 ~~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 265 (323)
T cd05276 191 YRTED--FAEEVKEATGGRGVDVILDMVGG-DYLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLR 265 (323)
T ss_pred CCchh--HHHHHHHHhCCCCeEEEEECCch-HHHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeecc
Confidence 65543 66667776665 89999999998 5578899999996 9999998754222 22233333 478888887654
Q ss_pred CCCCC-------CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336 318 NYKPR-------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI 368 (373)
Q Consensus 318 ~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v 368 (373)
..... +.+.++++++.++++.+ +.++.|+++++++|++.+.++... |++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv 322 (323)
T cd05276 266 SRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIV 322 (323)
T ss_pred chhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEe
Confidence 32111 12456777888887653 367899999999999999877643 655
No 111
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.1e-33 Score=256.65 Aligned_cols=310 Identities=24% Similarity=0.323 Sum_probs=244.6
Q ss_pred cchhhhccCC--CCeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCC
Q 017336 4 TAAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 4 ~~a~~~~~~~--~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
|||+++.+++ ..+++++.+.|.+.+++|+|++.++++|++|+....+.......|.++|||++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7899998888 35999999999999999999999999999999887765543344778999999999999999999999
Q ss_pred CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
||+|+..... ...|+|++|+.++++.++++|+++
T Consensus 81 Gd~V~~~~~~----------------------------------------------~~~~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASL----------------------------------------------ARGGSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCC----------------------------------------------CCCccceeEEEeCHHHeEECCCCC
Confidence 9999965210 012589999999999999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
+..+++.+++.+.+||+++.+.+.+.++++++|+|+ |.+|++++++++..|+ .|+++. ++++.+.++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999999878888999999999998 7999999999999999 677775 6778888889999888876
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhc-----ccceEEEE
Q 017336 241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-----NERTLKGT 314 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-----~~~~i~g~ 314 (373)
...+ +.+.++....+ ++|++++++++ .....++++++++ |+++.++...... . ...+. +.+.+...
T Consensus 193 ~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-G~~v~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~ 264 (325)
T cd08271 193 NDED--VCERIKEITGGRGVDAVLDTVGG-ETAAALAPTLAFN-GHLVCIQGRPDAS--P--DPPFTRALSVHEVALGAA 264 (325)
T ss_pred CCcc--HHHHHHHHcCCCCCcEEEECCCc-HhHHHHHHhhccC-CEEEEEcCCCCCc--c--hhHHhhcceEEEEEeccc
Confidence 5544 66777777766 89999999998 4556789999997 9999987543221 1 11122 23333322
Q ss_pred eccCC-----CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 315 FFGNY-----KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 315 ~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
..... ...+.+.++++++.++.+.+ +..+.|+++++.++++.+.++.. .|+++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 265 HDHGDPAAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 21111 01123566888888887653 35688999999999999987764 4887763
No 112
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.5e-32 Score=258.42 Aligned_cols=318 Identities=19% Similarity=0.269 Sum_probs=235.1
Q ss_pred cchhhhccCCCCeEEEEeecCCC---CCCeEEEEEeeeecCcccccccccCCCCCC-CCccccccceEEEEEeCCCCC-C
Q 017336 4 TAAAVAWEAGKPLIIQDVEVAPP---QAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVS-D 78 (373)
Q Consensus 4 ~~a~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~g~~~~~~-~p~i~G~e~~G~V~~vG~~v~-~ 78 (373)
+||+++...++++++++++.|.| ++++|+|++.++++|++|+....+...... .|.++|+|++|+|+++|++++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 47889999988888888888776 899999999999999999887654322222 377899999999999999998 8
Q ss_pred CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC----ce
Q 017336 79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG----CV 154 (373)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~----~~ 154 (373)
|++||+|++.....| .+.|+|++|+++++. .+
T Consensus 81 ~~~Gd~V~~~~~~~~--------------------------------------------~~~g~~~~~~~v~~~~~~~~~ 116 (352)
T cd08247 81 WKVGDEVCGIYPHPY--------------------------------------------GGQGTLSQYLLVDPKKDKKSI 116 (352)
T ss_pred CCCCCEEEEeecCCC--------------------------------------------CCCceeeEEEEEcccccccee
Confidence 999999986532110 023699999999987 79
Q ss_pred EeCCCCCCchhhhhcccchhhhhhhhhhcc-CCCCCCEEEEECC-CHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh
Q 017336 155 AKINPLAPLDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK 231 (373)
Q Consensus 155 ~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~~~~vlI~G~-g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~ 231 (373)
+++|+++++.+++.++..+.|||+++.... .++++++|+|+|+ |.+|++++++|+.+|. ..++++. ++++.+.+++
T Consensus 117 ~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~ 195 (352)
T cd08247 117 TRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKK 195 (352)
T ss_pred EECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHH
Confidence 999999999999999999999999877766 7999999999988 7999999999998753 3567775 4555668889
Q ss_pred cCCceeecCCCCCc--cHHHHHHHHc-CCCccEEEEccCChHhHHHHHHHhh---cCCcEEEEEcCCCCCc-ee------
Q 017336 232 FGVTDFVNTSEHDR--PIQEVIAEMT-NGGVDRSVECTGNIDNMISAFECVH---DGWGVAVLVGVPSKDA-VF------ 298 (373)
Q Consensus 232 lg~~~vi~~~~~~~--~~~~~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~---~~~g~~v~~g~~~~~~-~~------ 298 (373)
+|++.+++.++.+. .+.+.++..+ ++++|++|||+|+......++++++ ++ |+++.++...... ..
T Consensus 196 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~ 274 (352)
T cd08247 196 LGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSW 274 (352)
T ss_pred hCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhc
Confidence 99988887655321 1333344444 3389999999998667888999999 97 9999874221110 00
Q ss_pred ---eccchhhccc-----ceEEEEeccCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336 299 ---MTKPINVLNE-----RTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 369 (373)
Q Consensus 299 ---~~~~~~~~~~-----~~i~g~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~ 369 (373)
......+.+. ..+..... ....+.+.++++++.++.+. +++.+.++++++++|++.+.+++. +|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 350 (352)
T cd08247 275 DNPSANARKLFGSLGLWSYNYQFFLL--DPNADWIEKCAELIADGKVK--PPIDSVYPFEDYKEAFERLKSNRAKGKVVI 350 (352)
T ss_pred cccchhhhhhhhhhcCCCcceEEEEe--cCCHHHHHHHHHHHhCCCeE--eeeccEecHHHHHHHHHHHHcCCCCCcEEE
Confidence 0001111112 22221111 11113467788889898765 336789999999999999988774 58887
Q ss_pred ec
Q 017336 370 SM 371 (373)
Q Consensus 370 ~~ 371 (373)
++
T Consensus 351 ~~ 352 (352)
T cd08247 351 KV 352 (352)
T ss_pred eC
Confidence 63
No 113
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.9e-32 Score=255.42 Aligned_cols=305 Identities=22% Similarity=0.318 Sum_probs=237.3
Q ss_pred chhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 017336 5 AAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 5 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
||+.+...+.+ +++++.+.|.|.++||+|++.++++|++|+....+..+. ..+|.++|||++|+|+.+|+++..|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 67777777654 788899999999999999999999999999888776543 356889999999999999999999999
Q ss_pred CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
||+|..... .|+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALTR-------------------------------------------------VGGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeCC-------------------------------------------------CcceeeEEEechHHeEECCCCC
Confidence 999985420 1589999999999999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 240 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~ 240 (373)
++.+++.+++++.+||+++...+.+.++++|+|+|+ |.+|++++++|+.+|+ +|+++.. +++.+.++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999998877788999999999997 9999999999999999 7888877 88889999999754 344
Q ss_pred CCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc---------------chhh
Q 017336 241 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK---------------PINV 305 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~---------------~~~~ 305 (373)
...+ +.+. ....+++|++++++++ .....++++++++ |+++.+|........... ....
T Consensus 190 ~~~~--~~~~--~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd08273 190 RTKD--WLPA--MLTPGGVDVVFDGVGG-ESYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPT 263 (331)
T ss_pred CCcc--hhhh--hccCCCceEEEECCch-HHHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceec
Confidence 3332 3333 2333489999999998 4588999999997 999999876533221111 0111
Q ss_pred cccceEEEEeccCC----CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEE
Q 017336 306 LNERTLKGTFFGNY----KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCII 369 (373)
Q Consensus 306 ~~~~~i~g~~~~~~----~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~ 369 (373)
.+..++.+...... ...+.+.++++++.++.+.. .+.+.+++++++++++.+.+++.. |+++
T Consensus 264 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 264 GRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred cceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 12333332222100 01235778889999997753 367889999999999998877654 6654
No 114
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.4e-32 Score=252.71 Aligned_cols=311 Identities=24% Similarity=0.324 Sum_probs=247.4
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC-CCCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++...+.+ +++++.+.|.+.+++|+|++.++++|++|+....+... ....|.++|||++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999887765 77888888889999999999999999999988766543 233577899999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|+.... |.. ...|+|++|+.+++++++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~------------------~~~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLG------------------GLQGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcC------------------CCCCceeEEEEecHHHcccCCCC
Confidence 9999996421 100 01368999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++..++.+++.+.+||+++.+...+.++++++|+|+ |.+|++++++++.+|+ +|+++.++ ++.+.++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999999999998888899999999999986 9999999999999999 78888887 8889999999987776
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccC
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 318 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 318 (373)
.... +.+.+...+.+ ++|+++|++++ .....++++++++ |+++.++... . ...... ..++.++.+.....
T Consensus 195 ~~~~---~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~-~--~~~~~~-~~~~~~~~~~~~~~ 265 (326)
T cd08272 195 YRET---VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA-T--HDLAPL-SFRNATYSGVFTLL 265 (326)
T ss_pred cchh---HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC-c--cchhhH-hhhcceEEEEEccc
Confidence 5432 56667777776 89999999998 6788899999996 9999998653 1 111111 24666766655321
Q ss_pred -----CC---CCCCHHHHHHHHHcCCCCCCCcee-eeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 319 -----YK---PRTDLPSVVDMYMNKQLELEKFIT-HRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 319 -----~~---~~~~~~~~~~~l~~~~l~~~~~~~-~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
.. ..+.+..+++++.++.+.. +++ +.|++++++++++.+.+++. .|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 266 PLLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 00 1124667788888887653 334 88999999999999887664 4888764
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-31 Score=248.64 Aligned_cols=315 Identities=27% Similarity=0.383 Sum_probs=248.2
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+++...+.+ +++.+.+.|.+++++++|++.++++|+.|+....+.... ..+|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 678887765543 677788888899999999999999999999887665432 34577899999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|+..+... ....|++++|+.++++.++++|++
T Consensus 81 ~Gd~V~~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAAD--------------------------------------------LGQYGTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEeccccc--------------------------------------------cCCCccceEEEEechHhcEeCCCC
Confidence 999998653210 011368999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++.+++.+++.+.+||.++.....+.++++++|+|+ |.+|++++++++..|+ +++++++++++.+.++++|.+.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999999877888999999999987 9999999999999999 7888888899999998899887777
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccch-hhcccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~ 317 (373)
..... +.+.+.+.+.+ ++|++++++++ .....++++++++ |+++.+|..... ....... .+.++.++.+..+.
T Consensus 196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 270 (328)
T cd08268 196 TDEED--LVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLD 270 (328)
T ss_pred cCCcc--HHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEecc
Confidence 65543 66677777666 89999999998 7788899999997 999999865431 1122222 35578888776543
Q ss_pred CCC-CCC----CHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 318 NYK-PRT----DLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 318 ~~~-~~~----~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
... ..+ .++.+.+++.++.+.. .....|+++++.++++.+.++.. .|++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 271 EITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 211 011 2344555566676553 35688999999999999887765 488775
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=2.3e-31 Score=246.87 Aligned_cols=311 Identities=23% Similarity=0.309 Sum_probs=249.5
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 80 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 80 (373)
|||+.+...+.+ +++.+.+.|.+++++++|++.++++|+.|+....+..+. ..+|.++|||++|+|+.+|+.+..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 578887776654 667777777789999999999999999999887665432 34578999999999999999999999
Q ss_pred CCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCC
Q 017336 81 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL 160 (373)
Q Consensus 81 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~ 160 (373)
+||+|+.... .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALVA-------------------------------------------------GGGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEccC-------------------------------------------------CCcceeEEEecHHHcEeCCCC
Confidence 9999985410 158999999999999999999
Q ss_pred CCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 161 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 161 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
+++.+++.++.++.++|+++.+...+.++++++|+|+ |.+|++++++++.+|+ +|+++.+++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998778889999999999997 9999999999999999 7888888898889998999877776
Q ss_pred CCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEecc
Q 017336 240 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG 317 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 317 (373)
....+ +.+.+.....+ ++|++++++|+ .....++++++++ |+++.+|....... ......+ .+++++.+....
T Consensus 191 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (325)
T TIGR02824 191 YREED--FVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLR 265 (325)
T ss_pred cCchh--HHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehh
Confidence 55443 66777777665 89999999998 5788899999997 99999987542221 3333333 588888887754
Q ss_pred CCCCC-------CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 318 NYKPR-------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 318 ~~~~~-------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
..... ..+.++++++.++.+.+ +.++.|++++++++++.+.++.. .|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 266 ARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred hcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 32111 12355677888887643 36788999999999999887764 4877753
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=2.6e-31 Score=244.22 Aligned_cols=291 Identities=25% Similarity=0.381 Sum_probs=231.4
Q ss_pred cCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccC
Q 017336 23 VAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS 101 (373)
Q Consensus 23 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~ 101 (373)
.|.+.+++++|++.++++|+.|+....+.++. ..+|.++|+|++|+|+++|+++++|++||+|++....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 57789999999999999999999888776542 3568899999999999999999999999999865210
Q ss_pred CCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhh
Q 017336 102 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 181 (373)
Q Consensus 102 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~ 181 (373)
..|+|++|+.++++.++++|+++++++++.++..+.+||+++
T Consensus 72 -------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 135999999999999999999999999999999999999986
Q ss_pred hccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-Cc
Q 017336 182 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV 259 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~ 259 (373)
+...++++++++|+|+ |.+|++++|+++.+|+ +|+++.+++++.+.++++|++.+++....+ +.+.+...+++ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCc
Confidence 5788999999999975 9999999999999999 799998999999999999998888776544 77778777776 89
Q ss_pred cEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC---C---CCCCHHHHHHHHH
Q 017336 260 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY---K---PRTDLPSVVDMYM 333 (373)
Q Consensus 260 d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~---~~~~~~~~~~~l~ 333 (373)
|+++|++++ .....++++++++ |+++.+|..............+.++..+....+... . ..+.+.++++++.
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE 268 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence 999999976 7788899999997 999998765422112222222333333333222110 0 0123667788888
Q ss_pred cCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336 334 NKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI 368 (373)
Q Consensus 334 ~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v 368 (373)
++.+.. +.++.|++++++++++.+.+++.. |++
T Consensus 269 ~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv 302 (303)
T cd08251 269 EGELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVV 302 (303)
T ss_pred CCCccC--CCceEEcHHHHHHHHHHHHhCCCcceEe
Confidence 887653 367889999999999999877654 655
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=8.3e-31 Score=242.80 Aligned_cols=309 Identities=27% Similarity=0.473 Sum_probs=247.3
Q ss_pred cchhhhccCCCC--eEEEEeecCCCC-CCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL 79 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~ 79 (373)
|+|+++...+.+ +++.+.+ |.+. +++++|++.++++|++|+....+.... ...|.++|+|++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 688888755443 6777777 7666 499999999999999999887765432 3346689999999999999999999
Q ss_pred CCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCC
Q 017336 80 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 159 (373)
Q Consensus 80 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~ 159 (373)
++||+|+..+ ..|+|++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALT-------------------------------------------------GQGGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEec-------------------------------------------------CCceeEEEEEcCHHHceeCCC
Confidence 9999999541 025899999999999999999
Q ss_pred CCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee
Q 017336 160 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 238 (373)
Q Consensus 160 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi 238 (373)
++++.+++.+...+.+||.++.+...+.++++|+|+|+ |.+|++++++|+..|+ .|++++.++++.+.++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99999988888899999998777788999999999998 9999999999999999 789998999999999999988777
Q ss_pred cCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hhhcccceEEEEec
Q 017336 239 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFF 316 (373)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~ 316 (373)
+....+ +.+.+...+.+ ++|.+++++|+ .....++++++++ |+++.+|....... .... ..+.++.++.+...
T Consensus 190 ~~~~~~--~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (323)
T cd08241 190 DYRDPD--LRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW 264 (323)
T ss_pred ecCCcc--HHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence 765544 77778877776 89999999998 7888999999997 99999987542211 1111 22347788887765
Q ss_pred cCCCCC------CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEe
Q 017336 317 GNYKPR------TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIIS 370 (373)
Q Consensus 317 ~~~~~~------~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~ 370 (373)
..+... +.+.++++++.++.+.. +.++.|+++++.++++.+.++.. .|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 265 GAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred ccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 433211 24677888888887643 46788999999999998877664 477653
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=2.7e-31 Score=244.71 Aligned_cols=300 Identities=23% Similarity=0.336 Sum_probs=237.4
Q ss_pred cchhhhccCCCC--eEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCC
Q 017336 4 TAAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD 78 (373)
Q Consensus 4 ~~a~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~ 78 (373)
|||+++..++.. +++.+.+.|.++++||+|++.++++|+.|+....+... ...+|.++|||++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678888776653 56677788889999999999999999999988776442 3445889999999999999999999
Q ss_pred CCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCC
Q 017336 79 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN 158 (373)
Q Consensus 79 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p 158 (373)
+++||+|+..+.. ...|+|++|+.++.+.++++|
T Consensus 81 ~~~G~~V~~~~~~----------------------------------------------~~~g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPF----------------------------------------------TRGGAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCC----------------------------------------------CCCCcceeEEEecHHHhccCC
Confidence 9999999965310 012589999999999999999
Q ss_pred CCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee
Q 017336 159 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 237 (373)
Q Consensus 159 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v 237 (373)
+++++..++.+++.+.++|+++.....+.++++|+|+|+ |.+|++++++++..|+ +|+++..++ +.+.++++|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999999999999998877777999999999997 9999999999999999 788887767 8888889998777
Q ss_pred ecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEec
Q 017336 238 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF 316 (373)
Q Consensus 238 i~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 316 (373)
++....+ +.+ ...+ ++|++++++++ .....++++++++ |+++.+|....... ..+.++.++....+
T Consensus 193 ~~~~~~~--~~~----~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~ 259 (309)
T cd05289 193 IDYTKGD--FER----AAAPGGVDAVLDTVGG-ETLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFV 259 (309)
T ss_pred EeCCCCc--hhh----ccCCCCceEEEECCch-HHHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEe
Confidence 7665543 322 2333 79999999998 5888999999997 99999987542111 22234555554433
Q ss_pred cCCCCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336 317 GNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI 368 (373)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v 368 (373)
... .+.+.+++++++++.+. +++++.|++++++++++.+.++... |++
T Consensus 260 ~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 260 EPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred ccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 211 34688888999888764 3467899999999999998877643 554
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.6e-30 Score=240.42 Aligned_cols=310 Identities=22% Similarity=0.328 Sum_probs=241.2
Q ss_pred chhhhccCCC--CeEEEEeecCCCCCCeEEEEEeeeecCcccccccccCCCC-CCCCccccccceEEEEEeCCCCCCCCC
Q 017336 5 AAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV 81 (373)
Q Consensus 5 ~a~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 81 (373)
||+++...+. .+++.+.+.|.|++++|+|++.++++|+.|+....+..+. ...|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 3455554443 3777788888899999999999999999999887775432 345778999999999999999999999
Q ss_pred CCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCC
Q 017336 82 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 161 (373)
Q Consensus 82 Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~ 161 (373)
||+|+.... .|+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLTR-------------------------------------------------FGGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEecC-------------------------------------------------CCeeeeEEEecHHHeEECCCCC
Confidence 999995410 1589999999999999999999
Q ss_pred CchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceeec
Q 017336 162 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVN 239 (373)
Q Consensus 162 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~vi~ 239 (373)
++.+++.+++.+.+||+++.....+.++++|+|+|+ |.+|++++++|+.+ +. .++.. .++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence 999999999999999999888888999999999997 99999999999998 43 33322 3456788888899988877
Q ss_pred CCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc--eee-------------cc-ch
Q 017336 240 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA--VFM-------------TK-PI 303 (373)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~--~~~-------------~~-~~ 303 (373)
....+ +.+.++..+++++|+++|++|+ .....++++++++ |+++.+|...... ... .. ..
T Consensus 190 ~~~~~--~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (337)
T cd08275 190 YRTQD--YVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK 265 (337)
T ss_pred CCCCc--HHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence 66544 7777777775689999999998 5778899999997 9999998654211 111 11 12
Q ss_pred hhcccceEEEEeccCCCCC-----CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEEec
Q 017336 304 NVLNERTLKGTFFGNYKPR-----TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISM 371 (373)
Q Consensus 304 ~~~~~~~i~g~~~~~~~~~-----~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~ 371 (373)
.+.++.++.++.+...... ..+.++++++.++.+.+ +..+.|++++++++++.+.++.. .|+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP--KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC--ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 2347778877764321111 13567888888887654 36788999999999999987764 4888764
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=3.2e-30 Score=238.96 Aligned_cols=294 Identities=23% Similarity=0.313 Sum_probs=224.3
Q ss_pred EEEEeecCCCCCCeEEEEEeeeecCcccccccccCCC---CCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCC
Q 017336 17 IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC 93 (373)
Q Consensus 17 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 93 (373)
++.+.+.|.|+++||+|++.++++|++|+....|..+ ....|.++|||++|+|+++|++++.+++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 7788899999999999999999999999988776542 12346789999999999999999999999999865211
Q ss_pred CCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccch
Q 017336 94 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 173 (373)
Q Consensus 94 ~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~ 173 (373)
...|+|++|+.++++.++++|+++++++++.+++.+
T Consensus 93 --------------------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 --------------------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred --------------------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 012589999999999999999999999999999999
Q ss_pred hhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHH
Q 017336 174 STGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 252 (373)
Q Consensus 174 ~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~ 252 (373)
.+||+++.....+.++++|+|+|+ |.+|++++++|+.+|+ +|+++.++ ++.+.++++|++.+++....+ +. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---h
Confidence 999999877777999999999997 9999999999999999 78888765 888888999998887765543 32 3
Q ss_pred HHcCC-CccEEEEccCCh-HhHHHHHHHhhcCCcEEEEEcCCCCCceeec---cchhhcccceEEEEeccCCCCCCCHHH
Q 017336 253 EMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPS 327 (373)
Q Consensus 253 ~~~~~-~~d~vid~~g~~-~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~ 327 (373)
..+.+ ++|++++|+++. ......+..++++ |+++.+|.......... ..........+..... ....+.+.+
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 278 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLA--KPNAEDLEQ 278 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEe--cCCHHHHHH
Confidence 33444 899999999852 2333444458996 99999987643222211 0111111122222211 111446888
Q ss_pred HHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336 328 VVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCI 368 (373)
Q Consensus 328 ~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v 368 (373)
+++++.++.+.. ++++.|+++++++|++.+.+++.. |++
T Consensus 279 ~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vv 318 (319)
T cd08267 279 LAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVV 318 (319)
T ss_pred HHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence 899999887653 477899999999999999876643 554
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=5.6e-30 Score=233.51 Aligned_cols=281 Identities=22% Similarity=0.288 Sum_probs=226.1
Q ss_pred CeEEEEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCc
Q 017336 29 MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD 108 (373)
Q Consensus 29 ~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~ 108 (373)
+|++||+.++++|++|+....+.. ..+|.++|||++|+|+++|+++..+++||+|++..
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999887654 34578999999999999999999999999998541
Q ss_pred cccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCC
Q 017336 109 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 188 (373)
Q Consensus 109 ~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 188 (373)
.|+|++|+.++.+.++++|+++++.+++.+++++.++|.++.+...+++
T Consensus 60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 2589999999999999999999999999999999999998877788999
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC--CceeecCCCCCccHHHHHHHHcCC-CccEEEE
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 264 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg--~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid 264 (373)
+++|+|+|+ |.+|++++|+++.+|+ +|+++.+++++.+.+++++ ++.+++....+ +.+.+.+.+.+ ++|+++|
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEe
Confidence 999999975 9999999999999999 7888888889999998888 66777665443 77778887766 8999999
Q ss_pred ccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC------CCCCHHHHHHHHHcCCCC
Q 017336 265 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK------PRTDLPSVVDMYMNKQLE 338 (373)
Q Consensus 265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~l~~~~l~ 338 (373)
++|+. .+..++++++++ |+++.+|..............+.++.++....+.... ..+.+.++++++.++++.
T Consensus 186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK 263 (293)
T ss_pred CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence 99984 889999999997 9999998754321112222333355555554432211 012366788888888765
Q ss_pred CCCceeeeeccccHHHHHHHHHcCCce-eEE
Q 017336 339 LEKFITHRIPFSEINKAFEYMVKGEGL-RCI 368 (373)
Q Consensus 339 ~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v 368 (373)
++....+++++++++++.+.+++.. |++
T Consensus 264 --~~~~~~~~~~~~~~a~~~~~~~~~~~~iv 292 (293)
T cd05195 264 --PLPPTVVPSASEIDAFRLMQSGKHIGKVV 292 (293)
T ss_pred --cCCCeeechhhHHHHHHHHhcCCCCceec
Confidence 3467789999999999999887754 655
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=1.2e-29 Score=230.95 Aligned_cols=276 Identities=21% Similarity=0.328 Sum_probs=221.8
Q ss_pred EEEeeeecCcccccccccCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccc
Q 017336 33 IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI 112 (373)
Q Consensus 33 V~v~~~~i~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~ 112 (373)
||+.++++|++|+....+.++ .|.++|||++|+|+.+|+.++.|++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999998877543 367899999999999999999999999998541
Q ss_pred cCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEE
Q 017336 113 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 192 (373)
Q Consensus 113 ~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~v 192 (373)
.|+|++|+.++.++++++|+++++.+++.+++.+.++|.++.+...+.++++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 25899999999999999999999999999999999999987778889999999
Q ss_pred EEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--ceeecCCCCCccHHHHHHHHcCC-CccEEEEccCC
Q 017336 193 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN 268 (373)
Q Consensus 193 lI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~ 268 (373)
+|+|+ |.+|++++++++.+|+ +|+++.+++++.+.++++|+ +.++++...+ +.+.+.+.+++ ++|+++|++++
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 79999889999999999998 6677765544 77777777766 89999999986
Q ss_pred hHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCC-----CCCCHHHHHHHHHcCCCCCCCce
Q 017336 269 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK-----PRTDLPSVVDMYMNKQLELEKFI 343 (373)
Q Consensus 269 ~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~l~~~~l~~~~~~ 343 (373)
.....++++++++ |+++.+|..............+.++.++.+..+.... ..+.+.++++++.++++.+. .
T Consensus 186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 261 (288)
T smart00829 186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--P 261 (288)
T ss_pred -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--C
Confidence 7788899999997 9999998653211122222223455666555432110 11236678888888877643 4
Q ss_pred eeeeccccHHHHHHHHHcCCce-eEE
Q 017336 344 THRIPFSEINKAFEYMVKGEGL-RCI 368 (373)
Q Consensus 344 ~~~~~l~~~~~a~~~l~~~~~~-k~v 368 (373)
.+.|++++++++++.+..++.. |++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 262 VTVFPISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred ceEEcHHHHHHHHHHHhcCCCcceEe
Confidence 6789999999999999887643 654
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.96 E-value=8.3e-28 Score=207.62 Aligned_cols=294 Identities=19% Similarity=0.217 Sum_probs=224.0
Q ss_pred EEEeecC-CCCCCeEEEEEeeeecCcccccccccCCCC-CCCC-----ccccccceEEEEEeCCCCCCCCCCCEEeecCc
Q 017336 18 IQDVEVA-PPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFP-----RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT 90 (373)
Q Consensus 18 ~~~~~~p-~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p-----~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 90 (373)
..+.+++ ++++++|+||.+|-+..|.-...+....+. .-.| .|.| .++|+|++ |+.+.+++||.|+..
T Consensus 26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~--S~~~~~~~GD~v~g~-- 100 (343)
T KOG1196|consen 26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVID--SGHPNYKKGDLVWGI-- 100 (343)
T ss_pred eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEe--cCCCCCCcCceEEEe--
Confidence 3445544 468999999999999977533222111111 1112 2344 78999999 566889999999943
Q ss_pred CCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecC--ceEeCC--CCCCchhh
Q 017336 91 GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKIN--PLAPLDKV 166 (373)
Q Consensus 91 ~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~--~~~~~p--~~~~~~~a 166 (373)
. +|.||.++++. ..++++ .+.++...
T Consensus 101 ----------------------------~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~y 130 (343)
T KOG1196|consen 101 ----------------------------V----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYY 130 (343)
T ss_pred ----------------------------c----------------------cceEEEEecCcchhcccCCCCCccCHhhh
Confidence 3 89999999775 344443 45565554
Q ss_pred hh-cccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCC
Q 017336 167 CI-LSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH 243 (373)
Q Consensus 167 a~-~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~ 243 (373)
.. +..+.+|||..+.+++.+++|++|+|-|| |++|+++.|+|+.+|+ +|+++..++||..+++. +|.+..+||+++
T Consensus 131 lg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e 209 (343)
T KOG1196|consen 131 LGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE 209 (343)
T ss_pred hhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc
Confidence 33 56789999999999999999999999987 9999999999999999 99999999999999875 799999999887
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCc---eeecc--chhhcccceEEEEeccC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---VFMTK--PINVLNERTLKGTFFGN 318 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~---~~~~~--~~~~~~~~~i~g~~~~~ 318 (373)
. +..+++++..+.|+|+.||.+|+ ..++..+..|+.. ||++++|..+... +..+. ...+.|++++.|+....
T Consensus 210 ~-~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d 286 (343)
T KOG1196|consen 210 S-DLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSD 286 (343)
T ss_pred c-CHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeec
Confidence 2 27788888888899999999999 8999999999995 9999999876311 11111 12234889998877655
Q ss_pred CCCC--CCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCce-eEEEecC
Q 017336 319 YKPR--TDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGL-RCIISME 372 (373)
Q Consensus 319 ~~~~--~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~~-k~v~~~~ 372 (373)
+.+. +.+..+.+++++|++....-+ .-.|+..+.||..|.++++. |.++.+.
T Consensus 287 ~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 287 YLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred hhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccceEEEee
Confidence 5433 346778899999998765333 34799999999999999974 8888764
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=1.2e-27 Score=217.54 Aligned_cols=251 Identities=26% Similarity=0.412 Sum_probs=197.3
Q ss_pred cCCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCccccc
Q 017336 50 SKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSI 129 (373)
Q Consensus 50 g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 129 (373)
|.++ .++|.++|||++|+|+++|++++.|++||+|+..
T Consensus 14 ~~~~-~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------- 51 (277)
T cd08255 14 GTEK-LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------- 51 (277)
T ss_pred cCcc-CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------
Confidence 4344 3488999999999999999999999999999854
Q ss_pred CCCccccccCCcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHH
Q 017336 130 NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGAR 209 (373)
Q Consensus 130 ~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~ 209 (373)
+.|++|+.++++.++++|+++++.+++.+ +++++||+++ ..+++.+++++||+|+|.+|++++++|+
T Consensus 52 -----------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~ 118 (277)
T cd08255 52 -----------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAK 118 (277)
T ss_pred -----------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 26899999999999999999999998888 7899999986 4788999999999988999999999999
Q ss_pred HcCCcEEEEEcCChhHHHHHHhcC-CceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEE
Q 017336 210 IAGASRIIGVDRSSKRFEEAKKFG-VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL 288 (373)
Q Consensus 210 ~~g~~~V~~~~~~~~~~~~~~~lg-~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~ 288 (373)
++|+++|+++++++++.+.++++| .+.++..... ...+.++|++||+++.......++++++++ |+++.
T Consensus 119 ~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~---------~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~ 188 (277)
T cd08255 119 AAGAREVVGVDPDAARRELAEALGPADPVAADTAD---------EIGGRGADVVIEASGSPSALETALRLLRDR-GRVVL 188 (277)
T ss_pred HcCCCcEEEECCCHHHHHHHHHcCCCccccccchh---------hhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEE
Confidence 999944999999999999999999 4444432211 112238999999998778889999999997 99999
Q ss_pred EcCCCCCceeeccchhhc-ccceEEEEeccCC---------CCCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHH
Q 017336 289 VGVPSKDAVFMTKPINVL-NERTLKGTFFGNY---------KPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEY 358 (373)
Q Consensus 289 ~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~ 358 (373)
+|..... ..... ..+. +..++.+...... ...+.++++++++.++.+.. .+.+.|+++++++|++.
T Consensus 189 ~g~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~ 264 (277)
T cd08255 189 VGWYGLK-PLLLG-EEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRL 264 (277)
T ss_pred EeccCCC-ccccH-HHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHH
Confidence 9876533 21111 2222 5556666543221 11246889999999997543 36788999999999999
Q ss_pred HHcCC--ceeEEE
Q 017336 359 MVKGE--GLRCII 369 (373)
Q Consensus 359 l~~~~--~~k~v~ 369 (373)
+.+++ ..|+++
T Consensus 265 ~~~~~~~~~k~~~ 277 (277)
T cd08255 265 LFEDPPECLKVVL 277 (277)
T ss_pred HHcCCccceeeeC
Confidence 98873 347654
No 126
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=4.2e-27 Score=231.49 Aligned_cols=293 Identities=17% Similarity=0.201 Sum_probs=239.9
Q ss_pred eEEEEeecC---CCCCCeEEEEEeeeecCcccccccccCCCCCCCC-------ccccccceEEEEEeCCCCCCCCCCCEE
Q 017336 16 LIIQDVEVA---PPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP-------RIFGHEAAGVVESVGEGVSDLEVGDHV 85 (373)
Q Consensus 16 ~~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~i~G~e~~G~V~~vG~~v~~~~~Gd~V 85 (373)
+++.+.+.. +..++.=+-.|-|+++|..|++...|+.+..-.| .++|-||+|+- +-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCcEE
Confidence 666666655 2356667889999999999999999877654433 68999999984 459999
Q ss_pred eecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeCCCCCCchh
Q 017336 86 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 165 (373)
Q Consensus 86 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~p~~~~~~~ 165 (373)
+.... . -++++.+.++.++++.+|++..+++
T Consensus 1499 M~mvp------------------------------A-------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVP------------------------------A-------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeee------------------------------h-------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 95421 1 2789999999999999999999999
Q ss_pred hhhcccchhhhhhhhhhccCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecC
Q 017336 166 VCILSCGVSTGLGATLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNT 240 (373)
Q Consensus 166 aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~-G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~ 240 (373)
|++.|+.+.||||+|..++..++|++|||+ |+|++|++||.+|.+.|+ +|+.+..+.||++++.+. ....+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 999999999999999999999999999999 459999999999999999 899999999999998763 33444455
Q ss_pred CCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCC
Q 017336 241 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY 319 (373)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 319 (373)
.+.+ |..-+...|.| |+|+|+++... +-++.+++||+-+ ||+..+|..+-....++.+..|.+|.+++|..+-+.
T Consensus 1609 Rdts--FEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RDTS--FEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred cccc--HHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence 4444 88889999999 99999999987 8899999999997 999999976544445556666779999999876444
Q ss_pred CCC--CCHHHHHHHHHcCCC--CCCCceeeeeccccHHHHHHHHHcCCc-eeEEEecC
Q 017336 320 KPR--TDLPSVVDMYMNKQL--ELEKFITHRIPFSEINKAFEYMVKGEG-LRCIISME 372 (373)
Q Consensus 320 ~~~--~~~~~~~~~l~~~~l--~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~~~~ 372 (373)
... +.+.++.+++++|.- ...|+.+..|+-.++++||+.|.+++. +|+|+++.
T Consensus 1685 mege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred hcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 322 346677788777632 256778999999999999999999996 59999873
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=1.2e-23 Score=163.35 Aligned_cols=108 Identities=36% Similarity=0.639 Sum_probs=94.5
Q ss_pred CCeEEEEEeeeecCccccccccc-CCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCc
Q 017336 28 AMEVRIKIKYTSLCRTDLYFWES-KGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 106 (373)
Q Consensus 28 ~~evlV~v~~~~i~~~D~~~~~g-~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~ 106 (373)
|+||||||.++|||++|++.+.+ ......+|.++|||++|+|+++|++++.|++||+|++.+...|+.|.+|..+.++.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 78999999999999999999998 35567889999999999999999999999999999999999999999999999999
Q ss_pred CccccccCcccccccCCCcccccCCCccccccCCcceeeEEEEecCceEeC
Q 017336 107 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI 157 (373)
Q Consensus 107 ~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~~G~~a~~~~v~~~~~~~~ 157 (373)
|++.... |+. ..|+|+||+.+++++++++
T Consensus 81 c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVL---GLG-------------------LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEET---TTS-------------------STCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEe---EcC-------------------CCCcccCeEEEehHHEEEC
Confidence 9877655 322 2469999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.72 E-value=1.1e-16 Score=128.50 Aligned_cols=128 Identities=32% Similarity=0.556 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEEccCChHhHHHHHH
Q 017336 199 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 277 (373)
Q Consensus 199 ~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid~~g~~~~~~~~~~ 277 (373)
++|++++|+|+.+|+ +|++++++++|++.++++|++.++++++.+ +.+.+++.+++ ++|+||||+|++..++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 999999999999999999999999998877 99999999998 99999999998899999999
Q ss_pred HhhcCCcEEEEEcCCCCCceeeccchhh-cccceEEEEeccCCCCCCCHHHHHHHHHc
Q 017336 278 CVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPRTDLPSVVDMYMN 334 (373)
Q Consensus 278 ~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~ 334 (373)
+++++ |+++.+|... .....++...+ .+++++.|+..+. .++++++++++.+
T Consensus 78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 99997 9999999987 44555555544 4999999998655 3467888877653
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.47 E-value=1.1e-12 Score=123.32 Aligned_cols=175 Identities=21% Similarity=0.215 Sum_probs=133.2
Q ss_pred hhhhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHc
Q 017336 177 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 255 (373)
Q Consensus 177 ~~~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~ 255 (373)
+.++.+..+ .-+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|++.++.+|++.+. ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~--------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT--------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc--------HHHHH----
Confidence 344444444 4689999999999999999999999999 899999999999999999985331 11112
Q ss_pred CCCccEEEEccCChHhHHHH-HHHhhcCCcEEEEEcCCCCCceeeccchhhc-ccceEEEEeccCCCCCCCHH--HHHHH
Q 017336 256 NGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLP--SVVDM 331 (373)
Q Consensus 256 ~~~~d~vid~~g~~~~~~~~-~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~--~~~~~ 331 (373)
.++|+||+|+|.+..+... ++.++++ ++++.+|.. + ..++...+. +++++.++..+.. ..++. ..+.+
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~--~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--D--VEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--C--CccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2589999999998888866 9999997 999999854 2 233333333 7788887764321 11344 68999
Q ss_pred HHcCCC-CCCCceeee-----eccc-cHHHHHHHHHcCCc--eeEEEecC
Q 017336 332 YMNKQL-ELEKFITHR-----IPFS-EINKAFEYMVKGEG--LRCIISME 372 (373)
Q Consensus 332 l~~~~l-~~~~~~~~~-----~~l~-~~~~a~~~l~~~~~--~k~v~~~~ 372 (373)
+.+|++ ++...+++. ++|+ |+.+++..+.+++. .|+++.++
T Consensus 328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 999998 888888888 9999 99999998887764 37776653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.34 E-value=2.7e-11 Score=116.89 Aligned_cols=155 Identities=17% Similarity=0.143 Sum_probs=112.4
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCC-----------ccHHHHHH
Q 017336 185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-----------RPIQEVIA 252 (373)
Q Consensus 185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~-----------~~~~~~~~ 252 (373)
+..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ .++.+...
T Consensus 161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 45689999999999999999999999999 89999999999999999999854 5543321 12333333
Q ss_pred HH-cC--CCccEEEEccCChH-----h-HHHHHHHhhcCCcEEEEEcCCCCCc-eeeccchh-hc-ccceEEEEeccCCC
Q 017336 253 EM-TN--GGVDRSVECTGNID-----N-MISAFECVHDGWGVAVLVGVPSKDA-VFMTKPIN-VL-NERTLKGTFFGNYK 320 (373)
Q Consensus 253 ~~-~~--~~~d~vid~~g~~~-----~-~~~~~~~l~~~~g~~v~~g~~~~~~-~~~~~~~~-~~-~~~~i~g~~~~~~~ 320 (373)
+. .. +++|+||+|++.+. . .+++++.++++ |+++.+|...++. ........ +. +++++.|... .+
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P 316 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP 316 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc
Confidence 32 32 27999999999633 5 49999999997 9999999853221 22322222 33 7899998763 22
Q ss_pred CCCCHHHHHHHHHcCCCCCCCcee
Q 017336 321 PRTDLPSVVDMYMNKQLELEKFIT 344 (373)
Q Consensus 321 ~~~~~~~~~~~l~~~~l~~~~~~~ 344 (373)
.+...+..+++.++.+++.++++
T Consensus 317 -~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 -SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred -hhHHHHHHHHHHhCCccHHHHhc
Confidence 23233588899998877665554
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.15 E-value=1.2e-11 Score=98.60 Aligned_cols=119 Identities=18% Similarity=0.327 Sum_probs=76.3
Q ss_pred cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC--ChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh-ccc
Q 017336 232 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG--NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNE 308 (373)
Q Consensus 232 lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~ 308 (373)
||+++++|++..+ + ...+++|+|||++| +...+..+.++| ++ |+++.++. ....... .+.
T Consensus 1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHC
T ss_pred CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcc
Confidence 6899999998553 3 22348999999999 655557788888 96 99999874 1111111 122
Q ss_pred ceEEEEeccC-CC---CCCCHHHHHHHHHcCCCCCCCceeeeeccccHHHHHHHHHcCCc-eeEEE
Q 017336 309 RTLKGTFFGN-YK---PRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEG-LRCII 369 (373)
Q Consensus 309 ~~i~g~~~~~-~~---~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~l~~~~~-~k~v~ 369 (373)
..+....+.. .. ..+.++++++++.+|++.+. +.++|||+++++|++.+++++. +|+||
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 2223333221 01 12358999999999987654 8899999999999999999885 58886
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.64 E-value=1.2e-07 Score=85.89 Aligned_cols=167 Identities=18% Similarity=0.272 Sum_probs=103.3
Q ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHcCC
Q 017336 183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG 257 (373)
Q Consensus 183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~~ 257 (373)
.+.++++++||.+|+|. |..++++++..|.. +|++++.+++.++.+++. +...+. ....+ +.+ + .+..+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d--~~~-l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGE--IEA-L-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcc--hhh-C-CCCCC
Confidence 46788999999999988 88888888887753 799999999998888763 433221 11111 111 1 11233
Q ss_pred CccEEEEcc------CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEeccCCCCCCCHHHHHHH
Q 017336 258 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 331 (373)
Q Consensus 258 ~~d~vid~~------g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 331 (373)
.||+|+... ..+..+..+.+.|+++ |++++.+..... .+ +..+.+...+.+..... .....++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~---~~~~~~~~~~~~~~~~~---~~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-EL---PEEIRNDAELYAGCVAG---ALQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CC---CHHHHHhHHHHhccccC---CCCHHHHHHH
Confidence 799998643 2346789999999997 999987664322 11 11122222222221111 1245666777
Q ss_pred HHc-CCCCCCCceeeeeccccHHHHHHHH--HcCC
Q 017336 332 YMN-KQLELEKFITHRIPFSEINKAFEYM--VKGE 363 (373)
Q Consensus 332 l~~-~~l~~~~~~~~~~~l~~~~~a~~~l--~~~~ 363 (373)
+++ |-..........++++++.++++.+ .+++
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~ 252 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGR 252 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHhcccccc
Confidence 766 3322322244568899999999988 4444
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.53 E-value=1.2e-06 Score=84.77 Aligned_cols=127 Identities=19% Similarity=0.177 Sum_probs=90.6
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCC-----------CccHHHHHHH
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH-----------DRPIQEVIAE 253 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~-----------~~~~~~~~~~ 253 (373)
..++++|+|+|+|.+|++++++++.+|+ .|++++.+.++++.++++|++.+ ++..+. ..++.+...+
T Consensus 161 ~vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 161 KVPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 3467999999999999999999999999 79999999999999999999764 332111 0123333333
Q ss_pred HcC---CCccEEEEcc---CChH---hHHHHHHHhhcCCcEEEEEcCCCCCceeeccc-hh-hc--ccceEEEEe
Q 017336 254 MTN---GGVDRSVECT---GNID---NMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-IN-VL--NERTLKGTF 315 (373)
Q Consensus 254 ~~~---~~~d~vid~~---g~~~---~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~-~~-~~--~~~~i~g~~ 315 (373)
.+. .++|++|+|+ |.+. ..+..++.|+++ +.++.++...++ .+.+.. .. +. .++++.+..
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~ 312 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT 312 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence 332 2799999999 6543 577889999997 999999876544 343331 11 22 347776654
No 134
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.35 E-value=1.2e-05 Score=73.52 Aligned_cols=99 Identities=18% Similarity=0.283 Sum_probs=77.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.+++|+|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|+..+ . + +.+.+... ++|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~-------~-~~l~~~l~-~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-H-------L-SELAEEVG-KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-c-------H-HHHHHHhC-CCCEEEECCC
Confidence 58999999999999999999999999 89999999988888888887543 1 1 12223322 6999999997
Q ss_pred ChHhHHHHHHHhhcCCcEEEEEcCCCCCcee
Q 017336 268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF 298 (373)
Q Consensus 268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~ 298 (373)
........++.++++ +.++.++...+...+
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pggtd~ 249 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGGTDF 249 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCCcCe
Confidence 644556778889997 999989887655433
No 135
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.33 E-value=6.8e-06 Score=78.05 Aligned_cols=103 Identities=26% Similarity=0.270 Sum_probs=78.8
Q ss_pred hhhhhhhccCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHH
Q 017336 176 GLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM 254 (373)
Q Consensus 176 a~~~l~~~~~~~-~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~ 254 (373)
+|.++....++. .+++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 344444333444 89999999999999999999999999 899999988887766666764 221 22211
Q ss_pred cCCCccEEEEccCChHhHH-HHHHHhhcCCcEEEEEcCCC
Q 017336 255 TNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 255 ~~~~~d~vid~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~ 293 (373)
.++|+||+++|....+. ..+..++++ +.++..|...
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d 302 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD 302 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence 26899999999877776 688899997 8999888765
No 136
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.30 E-value=4.7e-08 Score=93.63 Aligned_cols=160 Identities=19% Similarity=0.209 Sum_probs=106.0
Q ss_pred cccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccC
Q 017336 60 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG 139 (373)
Q Consensus 60 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~ 139 (373)
.-|.|+++-+.+|++++++ +|++.+.. |++|.+| ++.|...... |.. -
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~---g~~-------------------l 136 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV---GKV-------------------L 136 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc---hHH-------------------H
Confidence 3588999999999999776 77777777 8888888 6667655544 322 1
Q ss_pred CcceeeEEEEecCceEe---C-CCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Q 017336 140 TSTFSEYTVVHSGCVAK---I-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR 215 (373)
Q Consensus 140 ~G~~a~~~~v~~~~~~~---~-p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~ 215 (373)
.+.|++++.++. .+.. + +..+|...+| .....+..+.-++++|+|+|+|.+|..+++.++..|+.+
T Consensus 137 ~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 137 ERLFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred HHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 258888887765 3332 2 2223222221 110122334457899999999999999999999999668
Q ss_pred EEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHh
Q 017336 216 IIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 271 (373)
Q Consensus 216 V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 271 (373)
|++++++.++.+ +++++|.. .+.. +.+.+... ++|+||+|++.+..
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~--------~~l~~~l~-~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKF--------EDLEEYLA-EADIVISSTGAPHP 253 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeH--------HHHHHHHh-hCCEEEECCCCCCc
Confidence 999999987754 66677764 2221 11222222 68999999987643
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.19 E-value=2.2e-05 Score=74.18 Aligned_cols=101 Identities=29% Similarity=0.314 Sum_probs=77.5
Q ss_pred hhhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcC
Q 017336 178 GATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 256 (373)
Q Consensus 178 ~~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~ 256 (373)
.++.+..+ .-.|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+
T Consensus 183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal----- 248 (406)
T TIGR00936 183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA----- 248 (406)
T ss_pred HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----
Confidence 33334333 3689999999999999999999999999 899998888887777777763 221 21212
Q ss_pred CCccEEEEccCChHhHH-HHHHHhhcCCcEEEEEcCCC
Q 017336 257 GGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 257 ~~~d~vid~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~ 293 (373)
.+.|++|+++|....+. ..+..++++ +.++.+|...
T Consensus 249 ~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 249 KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 25799999999988776 488899997 9999888764
No 138
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.07 E-value=5.6e-05 Score=68.45 Aligned_cols=139 Identities=13% Similarity=0.131 Sum_probs=86.4
Q ss_pred ceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhcc---CCCCCCEEEEECC-CHHHHHHHHHHH-HcCCcEE
Q 017336 142 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGL-GAVGLAAAEGAR-IAGASRI 216 (373)
Q Consensus 142 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~~~~vlI~G~-g~~G~~ai~la~-~~g~~~V 216 (373)
.|-+|.++..+..+.- ......+..-| -+.|.|. |.+.. ..-..+.|+|.+| +-+++..+..++ ..+..++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 5566666655543311 11112222223 3455553 23222 2234467778877 788888888887 5555589
Q ss_pred EEEcCChhHHHHHHhcCC-ceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 217 IGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 217 ~~~~~~~~~~~~~~~lg~-~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+++. |+...++.+++|+ +.|+.|++ +..+....--+++|+.|+.+.....-+.+...--..+.+|...
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 9995 5666679999998 56777654 3344334668999999998888888888887534566777653
No 139
>PLN02494 adenosylhomocysteinase
Probab=98.05 E-value=4.9e-05 Score=72.58 Aligned_cols=102 Identities=21% Similarity=0.285 Sum_probs=78.8
Q ss_pred hhhhhhccCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHc
Q 017336 177 LGATLNVAKP-ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 255 (373)
Q Consensus 177 ~~~l~~~~~~-~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~ 255 (373)
+.++.+..++ -.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|...+ + ..+.+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv-~-------leEal---- 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL-T-------LEDVV---- 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec-c-------HHHHH----
Confidence 3344444443 579999999999999999999999999 89999998887777777776522 1 22222
Q ss_pred CCCccEEEEccCChHhH-HHHHHHhhcCCcEEEEEcCCC
Q 017336 256 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 256 ~~~~d~vid~~g~~~~~-~~~~~~l~~~~g~~v~~g~~~ 293 (373)
...|+++++.|....+ ...++.|+++ +.++.+|...
T Consensus 308 -~~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~ 344 (477)
T PLN02494 308 -SEADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD 344 (477)
T ss_pred -hhCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence 1479999999986654 7899999997 9999998853
No 140
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.01 E-value=0.00011 Score=65.73 Aligned_cols=131 Identities=20% Similarity=0.182 Sum_probs=81.1
Q ss_pred ceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Q 017336 142 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 221 (373)
Q Consensus 142 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~ 221 (373)
+|.+|.. +...++.+++.+++-.+. .+.+.. ....+. ..+.++++||-+|+|. |.+++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555543 556778888877655433 111111 111111 1256889999999987 887776554 67767999999
Q ss_pred ChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCC
Q 017336 222 SSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 222 ~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
++...+.+++. +....+.....+ ..||+|+...... ..+..+.+.|+++ |++++.|..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~~~~~~------------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVYLPQGD------------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEccCC------------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99888877652 221101100000 1589998765432 3466888999997 999987654
No 141
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.00 E-value=2.4e-05 Score=72.21 Aligned_cols=108 Identities=24% Similarity=0.240 Sum_probs=77.3
Q ss_pred CceEeCCCCCCchhhhhcccchhhhhhhhhhccCC----CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHH-
Q 017336 152 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP----ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF- 226 (373)
Q Consensus 152 ~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~- 226 (373)
+..+++|+.+..+.++... +...++.++. .+.. -++++|+|+|+|.+|..+++.++..|..+|++++++.++.
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~-~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~ 216 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVE-LAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE 216 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHH-HHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence 3567788888877776654 5666666643 3332 3789999999999999999999988877899999998764
Q ss_pred HHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHh
Q 017336 227 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 271 (373)
Q Consensus 227 ~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 271 (373)
++++++|.. +++.+ .+.+.. ..+|+||.|++.+..
T Consensus 217 ~la~~~g~~-~~~~~--------~~~~~l-~~aDvVi~at~~~~~ 251 (311)
T cd05213 217 ELAKELGGN-AVPLD--------ELLELL-NEADVVISATGAPHY 251 (311)
T ss_pred HHHHHcCCe-EEeHH--------HHHHHH-hcCCEEEECCCCCch
Confidence 677788874 33211 122221 258999999998655
No 142
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.86 E-value=9.8e-05 Score=62.72 Aligned_cols=99 Identities=19% Similarity=0.314 Sum_probs=75.7
Q ss_pred hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh----HHHHHHhcCCceeec-CCCCCccHHHHHHHH
Q 017336 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKFGVTDFVN-TSEHDRPIQEVIAEM 254 (373)
Q Consensus 180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~----~~~~~~~lg~~~vi~-~~~~~~~~~~~~~~~ 254 (373)
+.+...++++++||=+|+|. |+.++-+++..+ +|+.+++.++ .++.++.+|.+.|.. ..+.... .
T Consensus 64 m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G-------~ 133 (209)
T COG2518 64 MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKG-------W 133 (209)
T ss_pred HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccC-------C
Confidence 45778999999999999876 999999999888 8999999886 344456788865432 2222211 2
Q ss_pred cCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336 255 TNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 255 ~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
... .||.|+-+.+-+......++.|+++ |+++.-
T Consensus 134 ~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P 168 (209)
T COG2518 134 PEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP 168 (209)
T ss_pred CCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence 222 8999999988878888999999998 888764
No 143
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.86 E-value=1.3e-05 Score=80.26 Aligned_cols=98 Identities=23% Similarity=0.275 Sum_probs=66.9
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC---------------------hhHHHHHHhcCCceeecCCC-
Q 017336 185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---------------------SKRFEEAKKFGVTDFVNTSE- 242 (373)
Q Consensus 185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~---------------------~~~~~~~~~lg~~~vi~~~~- 242 (373)
...++++|+|+|+|+.|+++++.++..|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 46789999999999999999999999999 78888742 35677888899887665433
Q ss_pred CCccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336 243 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
.+... +.+ ..++|+||+++|.+......+...... |.+..+
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~~~~~~i~g~~~~-gv~~~~ 252 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQLGKRLPIPGEDAA-GVLDAV 252 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCCCCcCCCCCCccC-CcEEHH
Confidence 22111 111 226999999999854433333333333 444433
No 144
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.84 E-value=0.00023 Score=64.72 Aligned_cols=99 Identities=20% Similarity=0.305 Sum_probs=72.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.+++++|+|.|.+|.+++..++.+|+ +|++++++.++.+.+.++|...+ . + +.+.+... .+|+||++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~l~-~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEKVA-EIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHHhc-cCCEEEECCC
Confidence 57899999999999999999999999 89999999888877777775422 1 1 12223322 6899999997
Q ss_pred ChHhHHHHHHHhhcCCcEEEEEcCCCCCcee
Q 017336 268 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF 298 (373)
Q Consensus 268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~ 298 (373)
..-.-...++.++++ ..++.++.......+
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~tdf 248 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPGGTDF 248 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCCCCCH
Confidence 633334667788886 888888776544433
No 145
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.83 E-value=0.00018 Score=67.99 Aligned_cols=99 Identities=22% Similarity=0.192 Sum_probs=70.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.+ ++......... .+.+.+... .+|+||+++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-----~~~l~~~l~-~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-----AYEIEDAVK-RADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-----HHHHHHHHc-cCCEEEEcc
Confidence 45669999999999999999999999 79999999888777654 55432222211 122333322 689999997
Q ss_pred C---C--hH-hHHHHHHHhhcCCcEEEEEcCCCC
Q 017336 267 G---N--ID-NMISAFECVHDGWGVAVLVGVPSK 294 (373)
Q Consensus 267 g---~--~~-~~~~~~~~l~~~~g~~v~~g~~~~ 294 (373)
+ . +. .....++.++++ +.++.++...+
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 3 2 22 246788889997 99999887543
No 146
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.79 E-value=0.00025 Score=67.97 Aligned_cols=101 Identities=22% Similarity=0.268 Sum_probs=76.2
Q ss_pred hhhhhccC-CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcC
Q 017336 178 GATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 256 (373)
Q Consensus 178 ~~l~~~~~-~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~ 256 (373)
.++++..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..+ + +.+.+
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~-~-------leell----- 307 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV-T-------LEDVV----- 307 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec-c-------HHHHH-----
Confidence 34444333 4579999999999999999999999999 89999888777655555665421 1 22222
Q ss_pred CCccEEEEccCChHhHH-HHHHHhhcCCcEEEEEcCCC
Q 017336 257 GGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 257 ~~~d~vid~~g~~~~~~-~~~~~l~~~~g~~v~~g~~~ 293 (373)
...|+|+.++|....+. ..+..|+++ +.++.+|...
T Consensus 308 ~~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 308 ETADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred hcCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 25899999999877765 899999997 9999998764
No 147
>PRK08324 short chain dehydrogenase; Validated
Probab=97.72 E-value=0.0003 Score=72.18 Aligned_cols=138 Identities=22% Similarity=0.286 Sum_probs=85.6
Q ss_pred ceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc
Q 017336 142 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD 220 (373)
Q Consensus 142 ~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~ 220 (373)
++++|..+++..++.+ +..+++++.... ......-+++++||+|+ |.+|..+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~----------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQR----------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhc----------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5667777777666666 555555554211 00122336789999987 9999999999999999 899999
Q ss_pred CChhHHHHHHh-cCC----ce-eecCCCCCccHHHHHHHHc--CCCccEEEEccCC------------------------
Q 017336 221 RSSKRFEEAKK-FGV----TD-FVNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN------------------------ 268 (373)
Q Consensus 221 ~~~~~~~~~~~-lg~----~~-vi~~~~~~~~~~~~~~~~~--~~~~d~vid~~g~------------------------ 268 (373)
++.++.+.+.+ ++. .. ..|..+.+ .+.+.+.+.. .+++|++|++.|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 98877665433 432 11 12332221 1222232221 2379999999982
Q ss_pred -hHhHHHHHHHhhc---CCcEEEEEcCCC
Q 017336 269 -IDNMISAFECVHD---GWGVAVLVGVPS 293 (373)
Q Consensus 269 -~~~~~~~~~~l~~---~~g~~v~~g~~~ 293 (373)
...++.+.+.++. + |+++.+++..
T Consensus 533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~~ 560 (681)
T PRK08324 533 HFLVAREAVRIMKAQGLG-GSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHHhcCCC-cEEEEECCcc
Confidence 1224455666665 4 7899988753
No 148
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.58 E-value=0.00032 Score=56.25 Aligned_cols=73 Identities=26% Similarity=0.356 Sum_probs=53.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCc--eeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE 264 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~--~vi~~~~~~~~~~~~~~~~~~~~~d~vid 264 (373)
.++++||+|+|++|.+++..+...|+++|+++.|+.+|.+.+. +++.. .++.+++ +. +.. ..+|+||+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~----~~~-~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LE----EAL-QEADIVIN 81 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HC----HHH-HTESEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HH----HHH-hhCCeEEE
Confidence 5899999999999999999999999988999999988876664 45332 1333322 11 111 26999999
Q ss_pred ccCCh
Q 017336 265 CTGNI 269 (373)
Q Consensus 265 ~~g~~ 269 (373)
|++.+
T Consensus 82 aT~~~ 86 (135)
T PF01488_consen 82 ATPSG 86 (135)
T ss_dssp -SSTT
T ss_pred ecCCC
Confidence 98875
No 149
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.54 E-value=0.00019 Score=69.10 Aligned_cols=160 Identities=20% Similarity=0.182 Sum_probs=95.7
Q ss_pred cccccceEEEEEeCCCCCCCCCCCEEeecCcCCCCCCccccCCCcCcCccccccCcccccccCCCcccccCCCccccccC
Q 017336 60 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG 139 (373)
Q Consensus 60 i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~g~~~~~~~~ 139 (373)
--|+|.++-+.+|+++.++. |++.+.. | .+|+ +.++.|...... |.. -
T Consensus 91 ~~g~ea~~hl~~V~~GldS~-----V~GE~qI-l---gQvk-~a~~~a~~~g~~---g~~-------------------l 138 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSM-----VLGEPQI-L---GQVK-DAYALAQEAGTV---GTI-------------------L 138 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhh-----hcCChHH-H---HHHH-HHHHHHHHcCCc---hHH-------------------H
Confidence 35999999999999998774 4433333 3 3333 333344332222 111 0
Q ss_pred CcceeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhcc---CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEE
Q 017336 140 TSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRI 216 (373)
Q Consensus 140 ~G~~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~---~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V 216 (373)
.+.|++.+ ++|+.+..+.+. ...+.+.++.++.... ...++++|+|+|+|.+|.++++.++..|+.+|
T Consensus 139 ~~lf~~a~--------~~~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 139 NRLFQKAF--------SVAKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred HHHHHHHH--------HHHhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 13454433 334433322221 1224455555532221 12578999999999999999999999998789
Q ss_pred EEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336 217 IGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 270 (373)
Q Consensus 217 ~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 270 (373)
++++++.++.+ +++++|.+ +++. +.+.+.. .++|+||+|++++.
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~--------~~~~~~l-~~aDvVI~aT~s~~ 254 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPL--------DELPEAL-AEADIVISSTGAPH 254 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeH--------HHHHHHh-ccCCEEEECCCCCC
Confidence 99999988755 66777754 3221 1122222 26899999999764
No 150
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.51 E-value=0.0004 Score=63.34 Aligned_cols=97 Identities=22% Similarity=0.277 Sum_probs=64.5
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCce-eecCCCCCccHHHHHHHHcCCCcc
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD-FVNTSEHDRPIQEVIAEMTNGGVD 260 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~-vi~~~~~~~~~~~~~~~~~~~~~d 260 (373)
..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++. +... +...... ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~-------~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY-------LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc-------cccccCCCce
Confidence 45789999999987 777777665 5766999999999887777652 2211 1111110 1112234899
Q ss_pred EEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCC
Q 017336 261 RSVECTGNI---DNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 261 ~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
+|+...... ..+..+.+.|+++ |.+++.|..
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 998755432 4566788999997 999887654
No 151
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.41 E-value=0.0017 Score=54.08 Aligned_cols=104 Identities=21% Similarity=0.348 Sum_probs=72.5
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHHcCC
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNG 257 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~~~~ 257 (373)
.+.++++++.++=+|+|. |..++++++..-..+|+++++++++.+..+ +||.+.+...... ..+.+....
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC--
Confidence 456788999777778865 677788886555559999999999888774 5888764332222 112222211
Q ss_pred CccEEEEccCC--hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336 258 GVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 258 ~~d~vid~~g~--~~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
.+|.+|---|. ++.++.++..|+++ |++|.-...
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 58999986553 25788999999997 999876443
No 152
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.35 E-value=0.0027 Score=54.51 Aligned_cols=102 Identities=23% Similarity=0.409 Sum_probs=70.2
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHH----hcCC-ceeecCCCCCccHHHHHHHHc
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGV-TDFVNTSEHDRPIQEVIAEMT 255 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~----~lg~-~~vi~~~~~~~~~~~~~~~~~ 255 (373)
....+.++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++ .++. +.+.....+ ..+.+.. .
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d---~~~~l~~-~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGE---APEILFT-I 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEec---hhhhHhh-c
Confidence 346788999999999988 8888999887642 38999999998887664 3562 332211111 2222222 2
Q ss_pred CCCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEE
Q 017336 256 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 256 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~ 289 (373)
.+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2479999986543 35678889999997 998863
No 153
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.33 E-value=0.0019 Score=59.60 Aligned_cols=102 Identities=23% Similarity=0.276 Sum_probs=72.2
Q ss_pred hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHHc
Q 017336 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT 255 (373)
Q Consensus 181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~~ 255 (373)
.+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ +.|.+.+..... + ..+....
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g-D--~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG-D--GYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-C--hhhcccc--
Confidence 455678899999999998 49999999998763 36999999988766554 466654432222 1 2111111
Q ss_pred CCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336 256 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 256 ~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
.+.+|+|+.+.+.+.......+.|+++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 136999999988767777889999997 987763
No 154
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0035 Score=56.62 Aligned_cols=77 Identities=21% Similarity=0.381 Sum_probs=54.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEEEEc
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSVEC 265 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~vid~ 265 (373)
+++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+.+...+ .|..+.+ .+.+.+.... .+++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGA-ALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEEC
Confidence 57999997 8999999999999999 89999898887777766665433 3443321 1333333322 2379999999
Q ss_pred cCC
Q 017336 266 TGN 268 (373)
Q Consensus 266 ~g~ 268 (373)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 883
No 155
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.31 E-value=0.0017 Score=56.37 Aligned_cols=79 Identities=20% Similarity=0.366 Sum_probs=57.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCC----ceeecCCCCCccHHHHHHHHcCC--Cc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV----TDFVNTSEHDRPIQEVIAEMTNG--GV 259 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~----~~vi~~~~~~~~~~~~~~~~~~~--~~ 259 (373)
.++.++|+|+ +++|.++++.+...|+ +|+.+.|..++++.+. +++. ...+|..+.. +....+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCcc
Confidence 3578999998 8999999999999999 8999999999888775 4772 1234433321 233444444444 69
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|++++..|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998874
No 156
>PRK06182 short chain dehydrogenase; Validated
Probab=97.27 E-value=0.004 Score=56.24 Aligned_cols=79 Identities=20% Similarity=0.389 Sum_probs=54.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSV 263 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~vi 263 (373)
++++++|+|+ |.+|...++.+...|+ +|++++++.++++.+.+.++..+ .|..+.+ .+.+.+.+.. .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEA-SIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEE
Confidence 3678999997 8999999999888999 89999898887766655555432 3433321 1323333221 23799999
Q ss_pred EccCC
Q 017336 264 ECTGN 268 (373)
Q Consensus 264 d~~g~ 268 (373)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99874
No 157
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.24 E-value=0.0021 Score=61.07 Aligned_cols=108 Identities=22% Similarity=0.242 Sum_probs=74.4
Q ss_pred hhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHH
Q 017336 174 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 253 (373)
Q Consensus 174 ~ta~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~ 253 (373)
...+..+.+...++++++||-+|+| .|..++.+++..|+ +|++++.+++..+.+++.....-+.....+ + .+
T Consensus 153 ~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~----~~ 224 (383)
T PRK11705 153 EAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--Y----RD 224 (383)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--h----hh
Confidence 3444455677788999999999986 46778888888898 899999999999988774321111111111 1 11
Q ss_pred HcCCCccEEEEc-----cCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336 254 MTNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 254 ~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
. .+.||.|+.. +|. ...++.+.+.|+|+ |.+++...
T Consensus 225 l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i 268 (383)
T PRK11705 225 L-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI 268 (383)
T ss_pred c-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 1 3479998753 333 25678899999997 99987644
No 158
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.24 E-value=0.0038 Score=52.81 Aligned_cols=81 Identities=17% Similarity=0.289 Sum_probs=58.9
Q ss_pred CCCCEEEEECC--CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCce-eecCCCCC--ccHHHHHHHHcCCCcc
Q 017336 187 ERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVD 260 (373)
Q Consensus 187 ~~~~~vlI~G~--g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~-vi~~~~~~--~~~~~~~~~~~~~~~d 260 (373)
...+.|||+|+ |++|++.+.=..+.|+ .|+++.++-++..-+. ++|... -+|..+++ ..+...++..+.|+.|
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence 35678999975 8999998888888999 8999999877766665 778643 24443332 1244456666777999
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
+.++..|.
T Consensus 84 ~L~NNAG~ 91 (289)
T KOG1209|consen 84 LLYNNAGQ 91 (289)
T ss_pred EEEcCCCC
Confidence 99997775
No 159
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.21 E-value=0.0074 Score=53.10 Aligned_cols=103 Identities=24% Similarity=0.372 Sum_probs=66.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc---CCceee--cCCCCCccHHHHHHHHc--CCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTDFV--NTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l---g~~~vi--~~~~~~~~~~~~~~~~~--~~~ 258 (373)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +++ +....+ |..+.+ .+.+.+.+.. -++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTE-SARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence 4689999987 8999999999999999 899999988776555 222 221222 222211 1222222221 136
Q ss_pred ccEEEEccCChH-----------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336 259 VDRSVECTGNID-----------------------NMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 259 ~d~vid~~g~~~-----------------------~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+|.++.+.+... .++..++.+.++ |+++.++...
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 899999887421 144555666776 8999888753
No 160
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.11 E-value=0.0039 Score=56.50 Aligned_cols=78 Identities=18% Similarity=0.307 Sum_probs=55.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHH---HHHHHcCCCccEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQE---VIAEMTNGGVDRS 262 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~---~~~~~~~~~~d~v 262 (373)
.++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+.+...+ .|..+.. .+.+ .+.+...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPE-SIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHH-HHHHHHHHHHHHcCCCccEE
Confidence 4678999998 8999999999888999 89999999888887777665443 3433321 1222 2223334579999
Q ss_pred EEccC
Q 017336 263 VECTG 267 (373)
Q Consensus 263 id~~g 267 (373)
|++.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
No 161
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.08 E-value=0.0034 Score=52.84 Aligned_cols=79 Identities=22% Similarity=0.322 Sum_probs=57.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc---eeecCCCCC--ccHHHHHHHHcCCCccE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT---DFVNTSEHD--RPIQEVIAEMTNGGVDR 261 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~---~vi~~~~~~--~~~~~~~~~~~~~~~d~ 261 (373)
.|.+|||+|+ +++|++.++-...+|= +|+++.|++++++.+++.... .|.|..+.+ ..+.+.+++..+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence 4679999976 8999998888888886 999999999999998875442 244443322 225555555443 5899
Q ss_pred EEEccCC
Q 017336 262 SVECTGN 268 (373)
Q Consensus 262 vid~~g~ 268 (373)
++++.|-
T Consensus 82 liNNAGI 88 (245)
T COG3967 82 LINNAGI 88 (245)
T ss_pred eeecccc
Confidence 9998874
No 162
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.05 E-value=0.0018 Score=58.44 Aligned_cols=100 Identities=24% Similarity=0.288 Sum_probs=63.6
Q ss_pred hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e-ecCCCCCccHHHHHHH
Q 017336 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F-VNTSEHDRPIQEVIAE 253 (373)
Q Consensus 180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v-i~~~~~~~~~~~~~~~ 253 (373)
+.+++++++|++||-+|+| -|..++.+|+..|+ +|++++.++++.+.++ +.|... + +...+ + ++
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D----~----~~ 123 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD----Y----RD 123 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----GG
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee----c----cc
Confidence 5678899999999999998 47778889998999 8999999999888775 456432 1 11111 1 11
Q ss_pred HcCCCccEEEEc-----cCC---hHhHHHHHHHhhcCCcEEEEEcC
Q 017336 254 MTNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 254 ~~~~~~d~vid~-----~g~---~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
.. +.||.|+.. +|. +.++..+.+.|+|+ |++++-..
T Consensus 124 ~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 124 LP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred cC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 21 279998763 432 35688999999997 99976543
No 163
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.03 E-value=0.011 Score=48.37 Aligned_cols=92 Identities=28% Similarity=0.287 Sum_probs=60.8
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
.-.|++++|+|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|... .. +.+.. ...|++|.+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~~-----------~~~a~-~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEV-MT-----------LEEAL-RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHHHT-TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEe-cC-----------HHHHH-hhCCEEEEC
Confidence 4578999999999999999999999999 9999999987766665556542 21 22222 257999999
Q ss_pred cCChHh-HHHHHHHhhcCCcEEEEEcCC
Q 017336 266 TGNIDN-MISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 266 ~g~~~~-~~~~~~~l~~~~g~~v~~g~~ 292 (373)
+|..+. -.+.++.|+++ ..+...|..
T Consensus 86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred CCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 998664 45788899986 555555544
No 164
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.01 E-value=0.0015 Score=56.48 Aligned_cols=102 Identities=22% Similarity=0.290 Sum_probs=66.9
Q ss_pred hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHH----HhcCCceee-cCCCCCccHHHHHHH
Q 017336 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEA----KKFGVTDFV-NTSEHDRPIQEVIAE 253 (373)
Q Consensus 180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~----~~lg~~~vi-~~~~~~~~~~~~~~~ 253 (373)
+.+...++++++||-+|+|. |+.++.+++..|.. +|+.+++.++-.+.+ ++++.+.+. ...+....+
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~------ 136 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW------ 136 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT------
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc------
Confidence 45667799999999999875 78888888877643 699999887654444 456765432 111111001
Q ss_pred HcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336 254 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 254 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
...++||.|+-+.+-+......++.|+++ |+++.-
T Consensus 137 ~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 137 PEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp GGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred ccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 11237999999988877778999999997 999873
No 165
>PRK12742 oxidoreductase; Provisional
Probab=97.00 E-value=0.016 Score=50.88 Aligned_cols=101 Identities=21% Similarity=0.292 Sum_probs=62.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH-HhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSV 263 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~-~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vi 263 (373)
++++|||+|+ |.+|..+++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+. ..+.+.+.+. +++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~--~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSADR-DAVIDVVRKS--GALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCCH-HHHHHHHHHh--CCCcEEE
Confidence 4689999997 8999999999999999 6766644 44444433 44565432 232221 1133333222 3699999
Q ss_pred EccCChH-------------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336 264 ECTGNID-------------------------NMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 264 d~~g~~~-------------------------~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
++.|... ....+...++.. |+++.++...
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 134 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN 134 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence 9987420 012334455665 8999887654
No 166
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.99 E-value=0.0063 Score=51.29 Aligned_cols=90 Identities=31% Similarity=0.377 Sum_probs=63.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
-.+++|.|+|.|.+|...++.++.+|+ +|++.+++..........+... .+ +.+.+. ..|+|+.+.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~~----l~ell~-----~aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----VS----LDELLA-----QADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----SS----HHHHHH-----H-SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----ee----hhhhcc-----hhhhhhhhh
Confidence 468999999999999999999999999 9999999887766455555522 11 333333 369999887
Q ss_pred CChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336 267 GNID-----NMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 267 g~~~-----~~~~~~~~l~~~~g~~v~~g~ 291 (373)
...+ +-...+..|+++ ..+|.++-
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred ccccccceeeeeeeeeccccc-eEEEeccc
Confidence 6321 234678888886 77776644
No 167
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.99 E-value=0.0025 Score=48.94 Aligned_cols=94 Identities=24% Similarity=0.261 Sum_probs=62.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEEcCChhHHHHHHhc----CC-ceeecCCCCCccHHHHHHHHcCCCccE
Q 017336 188 RGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKKF----GV-TDFVNTSEHDRPIQEVIAEMTNGGVDR 261 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~-~~g~~~V~~~~~~~~~~~~~~~l----g~-~~vi~~~~~~~~~~~~~~~~~~~~~d~ 261 (373)
|+++||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++. +. +.+- ....+ + . ......++||+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~-~~~~d--~-~-~~~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRIT-FVQGD--A-E-FDPDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEE-EEESC--C-H-GGTTTSSCEEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeE-EEECc--c-c-cCcccCCCCCE
Confidence 678999999876 777888888 4677 899999999988887653 22 2221 11111 1 0 11111237999
Q ss_pred EEEcc-CCh---------HhHHHHHHHhhcCCcEEEEE
Q 017336 262 SVECT-GNI---------DNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 262 vid~~-g~~---------~~~~~~~~~l~~~~g~~v~~ 289 (373)
|+... ... ..++...+.|+|+ |++++-
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 99877 221 2378899999997 988763
No 168
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.98 E-value=0.0097 Score=50.11 Aligned_cols=94 Identities=22% Similarity=0.309 Sum_probs=64.1
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC--
Q 017336 192 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN-- 268 (373)
Q Consensus 192 vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~-- 268 (373)
|+|+|+ |.+|...++.+...|. +|+++.|++++.+. ..+++.+ ..+-.+ . +.+.+... ++|+||+++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~-~~d~~d--~-~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEII-QGDLFD--P-DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEE-ESCTTC--H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccc-eeeehh--h-hhhhhhhh-hcchhhhhhhhhc
Confidence 789998 9999999999999997 89999999988776 4455433 222222 2 33444444 79999999984
Q ss_pred --hHhHHHHHHHhhcC-CcEEEEEcCCC
Q 017336 269 --IDNMISAFECVHDG-WGVAVLVGVPS 293 (373)
Q Consensus 269 --~~~~~~~~~~l~~~-~g~~v~~g~~~ 293 (373)
.......++.++.. -.+++.++...
T Consensus 73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccccceeeeccc
Confidence 23455555655443 14777776543
No 169
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.93 E-value=0.011 Score=55.66 Aligned_cols=95 Identities=17% Similarity=0.251 Sum_probs=66.3
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC---Cce-eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg---~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
++|||+|+|.+|+.+++.+.+.+-.+|++++++.++.+.+.... .+. .+|..+. +.+.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~-----~al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV-----DALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh-----HHHHHHHh-cCCEEEEe
Confidence 57999999999999999988888459999999999988887764 322 3444332 23334333 45999999
Q ss_pred cCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336 266 TGNIDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 266 ~g~~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
.+..-....+-.|++.+ =.++....
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~ 100 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSY 100 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEccc
Confidence 98755555555666664 44544443
No 170
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.93 E-value=0.016 Score=52.01 Aligned_cols=108 Identities=23% Similarity=0.308 Sum_probs=77.8
Q ss_pred hhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-ee-ecCCCCCccHHH
Q 017336 176 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF-VNTSEHDRPIQE 249 (373)
Q Consensus 176 a~~~l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~v-i~~~~~~~~~~~ 249 (373)
++..+.++.+++||++||=+|+|- |.+++-+|+..|+ +|++++-|+++.+.+++ .|.. .+ +...+
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d------- 130 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD------- 130 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-------
Confidence 444567889999999999999987 7778889999999 99999999988777654 5654 21 11111
Q ss_pred HHHHHcCCCccEEEE-----ccCC---hHhHHHHHHHhhcCCcEEEEEcCCCCC
Q 017336 250 VIAEMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGVPSKD 295 (373)
Q Consensus 250 ~~~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~~g~~v~~g~~~~~ 295 (373)
.+... +.||.|+. .+|. +.++..+.+.|+++ |++.+.......
T Consensus 131 -~rd~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 131 -YRDFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred -ccccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 11111 24777765 3443 36788999999997 999988776544
No 171
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.92 E-value=0.0086 Score=52.00 Aligned_cols=101 Identities=25% Similarity=0.318 Sum_probs=68.9
Q ss_pred hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCcee--ecCCCCCccHHHHHH
Q 017336 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIA 252 (373)
Q Consensus 180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~v--i~~~~~~~~~~~~~~ 252 (373)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ .|...+ +.-+... .+
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~-~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTL-GY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc-CC-----
Confidence 34566788999999999875 6677777777653 289999999887766654 454322 2111110 01
Q ss_pred HHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336 253 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 253 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
...+.||+|+-....+.......+.|+++ |+++..
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 11237999987666557778899999997 998774
No 172
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.89 E-value=0.018 Score=56.94 Aligned_cols=106 Identities=17% Similarity=0.155 Sum_probs=67.3
Q ss_pred hhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c--------CC------cee-ecCCCC
Q 017336 181 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--------GV------TDF-VNTSEH 243 (373)
Q Consensus 181 ~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l--------g~------~~v-i~~~~~ 243 (373)
-...+.+.+++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+.+ + |. ..+ .|..+
T Consensus 72 ~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD- 149 (576)
T PLN03209 72 PKELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK- 149 (576)
T ss_pred ccccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC-
Confidence 34566778999999998 9999999999988999 89988898877654322 1 21 111 22222
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChH---------------hHHHHHHHhhc-CCcEEEEEcCCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNID---------------NMISAFECVHD-GWGVAVLVGVPS 293 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~---------------~~~~~~~~l~~-~~g~~v~~g~~~ 293 (373)
. +.+.+.. +++|+||++.|... ....+++.+.. +.++||+++...
T Consensus 150 ---~-esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 ---P-DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred ---H-HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 1 2333333 36999999987531 11233343333 236899888754
No 173
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.89 E-value=0.014 Score=49.52 Aligned_cols=100 Identities=19% Similarity=0.152 Sum_probs=62.5
Q ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCC-Cc
Q 017336 183 VAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNG-GV 259 (373)
Q Consensus 183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~-~~ 259 (373)
...++++++||.+|+|.-+. +..+++.. +..+|++++.++.+ ...++..+ .+..+. ...+.+.+..+. ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~--~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDE--EVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCCh--hHHHHHHHHhCCCCc
Confidence 35578999999999876444 44444443 43489999998754 11233322 122222 234445555544 89
Q ss_pred cEEEEc-----cCC------------hHhHHHHHHHhhcCCcEEEEEc
Q 017336 260 DRSVEC-----TGN------------IDNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 260 d~vid~-----~g~------------~~~~~~~~~~l~~~~g~~v~~g 290 (373)
|+|+.. .|. ...+..+.++|+++ |+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 999952 121 24677889999997 9998753
No 174
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.88 E-value=0.0034 Score=52.39 Aligned_cols=102 Identities=22% Similarity=0.215 Sum_probs=66.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeec-CCCC--------------CccHHHHHH
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEH--------------DRPIQEVIA 252 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~-~~~~--------------~~~~~~~~~ 252 (373)
+..+|+|+|+|.+|..|+.+++.+|+ +|++.+...++.+..+..+...+.. +.+. .....+.+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 44889999999999999999999999 8999999999988888888765432 1111 011222233
Q ss_pred HHcCCCccEEEEccCC-----hH-hHHHHHHHhhcCCcEEEEEcCC
Q 017336 253 EMTNGGVDRSVECTGN-----ID-NMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 253 ~~~~~~~d~vid~~g~-----~~-~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
+... .+|++|.+.-. |. +.+..++.|+++ ..++.+..-
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 3322 47998864221 11 345778889986 778777653
No 175
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.018 Score=50.56 Aligned_cols=79 Identities=23% Similarity=0.391 Sum_probs=50.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC----Ccee-ecCCCCCccHHHHHHHHc--CCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG----VTDF-VNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg----~~~v-i~~~~~~~~~~~~~~~~~--~~~ 258 (373)
+++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++. +..+ .|..+. ..+.+.+++.. .++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDE-ADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence 4688999987 8999999998888899 799998887665544 3332 1111 222221 11333333321 137
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|++.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998764
No 176
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.88 E-value=0.012 Score=45.88 Aligned_cols=100 Identities=20% Similarity=0.319 Sum_probs=67.2
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCcee--ecCCCCCccHHHHHHHHc
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMT 255 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~v--i~~~~~~~~~~~~~~~~~ 255 (373)
....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++ ++...+ +..+.. .... ..
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~-----~~~~-~~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAP-----EALE-DS 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccc-----ccCh-hh
Confidence 345566788899999977 8888889988754589999999888777643 444322 211110 0011 11
Q ss_pred CCCccEEEEccCC---hHhHHHHHHHhhcCCcEEEEE
Q 017336 256 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 256 ~~~~d~vid~~g~---~~~~~~~~~~l~~~~g~~v~~ 289 (373)
.+.+|+|+...+. ...+..+.+.|+++ |++++.
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 2379999976533 24788999999997 998865
No 177
>PRK14967 putative methyltransferase; Provisional
Probab=96.85 E-value=0.06 Score=47.11 Aligned_cols=97 Identities=24% Similarity=0.173 Sum_probs=63.3
Q ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCC
Q 017336 183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG 258 (373)
Q Consensus 183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~ 258 (373)
...+.++++||-.|+|. |..++.+++. ++.+|++++.+++..+.+++ .+....+.. .+ +.+. ...+.
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~~ 101 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFRP 101 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCCC
Confidence 34567889999999987 8888888875 55589999999988776544 343321111 11 2221 12237
Q ss_pred ccEEEEccCC---------------------------hHhHHHHHHHhhcCCcEEEEE
Q 017336 259 VDRSVECTGN---------------------------IDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 259 ~d~vid~~g~---------------------------~~~~~~~~~~l~~~~g~~v~~ 289 (373)
||+|+...+. ..++..+.+.|+++ |+++++
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 9999975210 12456788899997 998865
No 178
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.81 E-value=0.0091 Score=53.16 Aligned_cols=79 Identities=23% Similarity=0.343 Sum_probs=55.8
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCce-e--ecCCCCCccHHHHHHH-Hc-
Q 017336 187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-F--VNTSEHDRPIQEVIAE-MT- 255 (373)
Q Consensus 187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg~~~-v--i~~~~~~~~~~~~~~~-~~- 255 (373)
..++++||+|| +++|...+..+.+.|+ .|+.+.|+++|++.+++ .+... + +|..+.+ -.+.+.. +.
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~--~~~~l~~~l~~ 80 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE--ALERLEDELKE 80 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh--HHHHHHHHHHh
Confidence 46789999998 8999999999999999 89999999999887753 33322 3 3433332 2233332 22
Q ss_pred C-CCccEEEEccCC
Q 017336 256 N-GGVDRSVECTGN 268 (373)
Q Consensus 256 ~-~~~d~vid~~g~ 268 (373)
. ..+|+.+++.|-
T Consensus 81 ~~~~IdvLVNNAG~ 94 (265)
T COG0300 81 RGGPIDVLVNNAGF 94 (265)
T ss_pred cCCcccEEEECCCc
Confidence 2 279999999884
No 179
>PRK08017 oxidoreductase; Provisional
Probab=96.81 E-value=0.0095 Score=53.05 Aligned_cols=78 Identities=18% Similarity=0.304 Sum_probs=55.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCC--ccHHHHHHHHcCCCccEEEEc
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD--RPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~--~~~~~~~~~~~~~~~d~vid~ 265 (373)
+++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+++.++..+ .|..+.+ .++.+.+.+...+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999998 9999999999999999 89999999888888877776543 3332221 112223333334578999988
Q ss_pred cCC
Q 017336 266 TGN 268 (373)
Q Consensus 266 ~g~ 268 (373)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 763
No 180
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.023 Score=49.80 Aligned_cols=79 Identities=22% Similarity=0.300 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH----HHhcCCcee-ecCCCCCccHHHHHHHHc--CCCc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGV 259 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~----~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~ 259 (373)
+++++||+|+ |.+|..+++.+.+.|+ +|+.++++.++... +...+...+ .|..+.. ++.+.+.+.. -+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQ-AARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHH-HHHHHHHHHHHHhCCc
Confidence 3689999997 9999999999988899 79999887655322 222333322 2222211 1222222221 1379
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|+||++.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998773
No 181
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.77 E-value=0.014 Score=52.13 Aligned_cols=131 Identities=21% Similarity=0.169 Sum_probs=88.4
Q ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC---------CccHHHHHHH
Q 017336 183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH---------DRPIQEVIAE 253 (373)
Q Consensus 183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~---------~~~~~~~~~~ 253 (373)
.+.-.++..+++.|.|..|++++..++..|+ .|...+....+.+..+++|+...-..+++ +.+|...-.+
T Consensus 158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~ 236 (356)
T COG3288 158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE 236 (356)
T ss_pred hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence 3455677889999999999999999999999 78887778888888888888653211211 1223333222
Q ss_pred HcCC---CccEEEEccCCh------HhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhh--cccceEEEEe
Q 017336 254 MTNG---GVDRSVECTGNI------DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV--LNERTLKGTF 315 (373)
Q Consensus 254 ~~~~---~~d~vid~~g~~------~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~--~~~~~i~g~~ 315 (373)
+... ++|+||-+.--| -....++..|+|+ +.++.+....++..-...+-.+ .++.+|.|..
T Consensus 237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 2222 799999874322 2356899999997 9999888765443322222222 2788888864
No 182
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.76 E-value=0.013 Score=51.78 Aligned_cols=77 Identities=23% Similarity=0.393 Sum_probs=52.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCcee-ecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE 264 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid 264 (373)
.+++++|+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ .+...+ .|..+.+ ....+.+. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~--~v~~~~~~-~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDA--AIRAALAA-AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH--HHHHHHHH-hCCCCEEEE
Confidence 4679999998 8999999999999999 79999888777655533 454332 2333221 22222222 237999999
Q ss_pred ccCC
Q 017336 265 CTGN 268 (373)
Q Consensus 265 ~~g~ 268 (373)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9874
No 183
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.75 E-value=0.011 Score=52.98 Aligned_cols=110 Identities=21% Similarity=0.293 Sum_probs=68.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee----cCCCCCccHHHHHHHH--c
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV----NTSEHDRPIQEVIAEM--T 255 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi----~~~~~~~~~~~~~~~~--~ 255 (373)
.++.|+|+|| +++|.+++--.-..|+ +++.+.+..++++.+ ++.+... ++ |-.+.+ +....+.+. .
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~-~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEE-SVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHH-HHHHHHHHHHHh
Confidence 5789999998 7999988877778898 555555777666655 3444332 22 222211 122222221 1
Q ss_pred CCCccEEEEccCCh-------------------------HhHHHHHHHhhcCC-cEEEEEcCCCCCceee
Q 017336 256 NGGVDRSVECTGNI-------------------------DNMISAFECVHDGW-GVAVLVGVPSKDAVFM 299 (373)
Q Consensus 256 ~~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~~-g~~v~~g~~~~~~~~~ 299 (373)
-|++|+.++..|-. .....++..|+..+ |+|+.+++..+...++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 24899999987732 13446677777754 8999998876543333
No 184
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.73 E-value=0.011 Score=51.03 Aligned_cols=101 Identities=17% Similarity=0.199 Sum_probs=67.4
Q ss_pred hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHH----hcCCce---eecCCCCCccHHHHH
Q 017336 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTD---FVNTSEHDRPIQEVI 251 (373)
Q Consensus 180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~----~lg~~~---vi~~~~~~~~~~~~~ 251 (373)
+.+...++++++||=+|+|. |..++.+++..+ ..+|++++.+++..+.++ +.+... ++..+..+ .+
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~-----~~ 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKR-----GL 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCccc-----CC
Confidence 34556788899999999865 777777777664 238999999988666554 345421 22211111 01
Q ss_pred HHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336 252 AEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 252 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
. ..+.||+|+-+.......+...+.|+++ |+++..
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 0 1237999998766656677888999997 998764
No 185
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.0088 Score=55.73 Aligned_cols=79 Identities=23% Similarity=0.413 Sum_probs=52.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~ 257 (373)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++++.+ ++.|.+.. .|..+.+ ..+.+.+.+. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF-GG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh-cC
Confidence 4689999998 8999999999999999 799998988776543 34555432 2332221 0122222222 24
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 186
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.011 Score=51.67 Aligned_cols=77 Identities=9% Similarity=0.181 Sum_probs=51.5
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee--ecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v--i~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
++++|+|+ |.+|...+..+...|+ +|+++++++++.+.+++++-..+ .|..+. ..+.+.+.....+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDP-ASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCH-HHHHHHHHHhhcCCCCEEEEcC
Confidence 57899987 8999998888888899 89999988777666655432222 232221 1133333333334799999987
Q ss_pred CC
Q 017336 267 GN 268 (373)
Q Consensus 267 g~ 268 (373)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
No 187
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.69 E-value=0.012 Score=56.41 Aligned_cols=76 Identities=11% Similarity=0.180 Sum_probs=54.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
-.+++|||+|+|.+|.+++..+...|+..++++.++.++.+.+ .+++...++. + +.+.+... .+|+||+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~l~-~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQLIK-KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHHhc-cCCEEEEC
Confidence 4578999999999999999999999988899999997775554 4455212222 2 22323222 58999999
Q ss_pred cCChHh
Q 017336 266 TGNIDN 271 (373)
Q Consensus 266 ~g~~~~ 271 (373)
++.+..
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998654
No 188
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.68 E-value=0.025 Score=55.15 Aligned_cols=79 Identities=24% Similarity=0.376 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh--hHH-HHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRF-EEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~--~~~-~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d 260 (373)
+++++||+|+ |++|...++.+...|+ +|+++++++ ++. +..++++...+ .|..+.+ ...+.+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCCC
Confidence 5789999987 9999999999999999 788887643 222 23344555332 3433322 1222222221 23699
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
++|++.|.
T Consensus 287 ~vi~~AG~ 294 (450)
T PRK08261 287 IVVHNAGI 294 (450)
T ss_pred EEEECCCc
Confidence 99999883
No 189
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.67 E-value=0.071 Score=45.95 Aligned_cols=116 Identities=18% Similarity=0.145 Sum_probs=67.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh-HHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~-~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
.+++|||+|+|.+|..-++.+...|+ .|++++.... ..+.+.+.|--..+. .+... .. + .++|+||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~~---~d---l--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RCFDA---DI---L--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CCCCH---HH---h--CCcEEEEECC
Confidence 46799999999999999999999999 7888866432 223333333111121 11110 01 1 2689999999
Q ss_pred CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEE
Q 017336 267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 314 (373)
Q Consensus 267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 314 (373)
+.++.-.......+.. |..+...+......+.++...-...+++--+
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~~~~g~l~iais 124 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSIVDRSPVVVAIS 124 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeEEEcCCEEEEEE
Confidence 9865545555555554 7777655433333344333222244555433
No 190
>PRK00536 speE spermidine synthase; Provisional
Probab=96.66 E-value=0.0072 Score=53.89 Aligned_cols=101 Identities=10% Similarity=-0.038 Sum_probs=66.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEE-Ec
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV-EC 265 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vi-d~ 265 (373)
...++|||+|+|. |.++-.++|.-. +|+.++.+++=.+.++++-....-..+++.-.+...+.+...+.||+|| |+
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 4459999998876 556678888753 8999999999888888832110001111111122223333334799955 55
Q ss_pred cCChHhHHHHHHHhhcCCcEEEEEcC
Q 017336 266 TGNIDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 266 ~g~~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
.-.+++...+.++|+++ |.++.-+.
T Consensus 148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 148 EPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred CCChHHHHHHHHhcCCC-cEEEECCC
Confidence 66778899999999997 99887643
No 191
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.028 Score=50.10 Aligned_cols=79 Identities=22% Similarity=0.246 Sum_probs=50.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~---lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 258 (373)
+++++||+|+ |.+|...++.+...|+ +|+++++++++.+..++ .+... . .|..+.. .+.+.+.+.. .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDA-QCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcCC
Confidence 4679999997 8999999988888999 78888887776544433 33321 1 2222211 1222222221 137
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999883
No 192
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.66 E-value=0.017 Score=48.08 Aligned_cols=96 Identities=20% Similarity=0.209 Sum_probs=61.5
Q ss_pred hcccchhhhhhhhhhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336 168 ILSCGVSTGLGATLNVAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 246 (373)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~g~-~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~ 246 (373)
..|+...++...+.+...--.+++|||+|+|. +|..++..++..|+ +|+++.++.+.
T Consensus 23 ~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~--------------------- 80 (168)
T cd01080 23 FIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN--------------------- 80 (168)
T ss_pred ccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh---------------------
Confidence 34444344443333333345789999999985 69999999999999 78888765211
Q ss_pred HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+.+.+. .+|+||.+++.+..+.. +.++++ -.++.++...
T Consensus 81 l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 81 LKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred HHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 222121 48999999999664333 356664 6666666543
No 193
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.65 E-value=0.06 Score=46.29 Aligned_cols=115 Identities=11% Similarity=-0.017 Sum_probs=63.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
.+++|||+|+|.+|...+..+...|+ .|++++... +....+.+-+.- ........ ...-.++|+||-++
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i-~~~~~~~~--------~~~l~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKI-RWKQKEFE--------PSDIVDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCE-EEEecCCC--------hhhcCCceEEEEcC
Confidence 46899999999999999988888998 788886542 122222222211 11111111 00002689999999
Q ss_pred CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEE
Q 017336 267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGT 314 (373)
Q Consensus 267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 314 (373)
+.+ .++..+...+.. +.++...+......+.++...-...+++--+
T Consensus 79 ~d~-elN~~i~~~a~~-~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIs 124 (202)
T PRK06718 79 NDP-RVNEQVKEDLPE-NALFNVITDAESGNVVFPSALHRGKLTISVS 124 (202)
T ss_pred CCH-HHHHHHHHHHHh-CCcEEECCCCccCeEEEeeEEEcCCeEEEEE
Confidence 984 455555555553 6666555443333343333222244555433
No 194
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.61 E-value=0.022 Score=48.31 Aligned_cols=96 Identities=17% Similarity=0.181 Sum_probs=61.4
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCCccE
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 261 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~ 261 (373)
++++++||-+|+|. |..++.+++.....+|++++.+++..+.+++ .+.+.+ .....+ ..+ +.. .+.+|+
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~d--~~~-~~~--~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHGR--AEE-FGQ--EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEecc--Hhh-CCC--CCCccE
Confidence 44588999998864 5556666665433389999999887766643 454332 111111 111 111 237999
Q ss_pred EEEccCC--hHhHHHHHHHhhcCCcEEEEE
Q 017336 262 SVECTGN--IDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 262 vid~~g~--~~~~~~~~~~l~~~~g~~v~~ 289 (373)
|+..... +..+..+.+.|+++ |+++.+
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~ 144 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPG-GRFLAL 144 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 9974322 36778899999997 999877
No 195
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.036 Score=49.66 Aligned_cols=79 Identities=25% Similarity=0.310 Sum_probs=51.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCCccHHHHHHHHc--CCCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d 260 (373)
.++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++... + .|..+.+ .+.+.+.+.. -+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDA-AIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4689999987 8999999999999999 899998887755444 4444321 1 2332221 1222222221 13689
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
+++++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998874
No 196
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.018 Score=50.24 Aligned_cols=77 Identities=16% Similarity=0.320 Sum_probs=52.8
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
+++||+|+ |.+|...++.+...|+ +|+.++++.++.+.++..+...+ .|..+.+ .+.+.+.+...+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence 47899987 8999999988888899 79999898887777776665422 3333321 2333233333337999999877
Q ss_pred C
Q 017336 268 N 268 (373)
Q Consensus 268 ~ 268 (373)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 197
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.55 E-value=0.02 Score=49.80 Aligned_cols=103 Identities=20% Similarity=0.263 Sum_probs=66.9
Q ss_pred hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHH
Q 017336 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEM 254 (373)
Q Consensus 180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~ 254 (373)
+.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.++ ++|.+.+..... + ..+.. .
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~-d--~~~~~--~ 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG-D--GTQGW--E 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC-C--cccCC--c
Confidence 34556788999999998865 6666777776653 26999999988776654 345533211111 1 10000 0
Q ss_pred cCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336 255 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 255 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
..+.||+|+-....+.......+.|+++ |+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 1137999887655556777888999997 998764
No 198
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.017 Score=51.50 Aligned_cols=79 Identities=20% Similarity=0.292 Sum_probs=51.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS 262 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~v 262 (373)
++++|||+|+ |.+|..+++.+...|+ +|+++++++.+.+.. ++++...+ .|..+.+ .+.+.+.+.. .+++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 4789999998 8999999999999999 898888887765544 44544322 2333221 1222222221 1368999
Q ss_pred EEccCC
Q 017336 263 VECTGN 268 (373)
Q Consensus 263 id~~g~ 268 (373)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 199
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.043 Score=48.54 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=59.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-HHHH----HHhcCCce-e--ecCCCCCccHHHHHHHHcC--
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD-F--VNTSEHDRPIQEVIAEMTN-- 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-~~~~----~~~lg~~~-v--i~~~~~~~~~~~~~~~~~~-- 256 (373)
+++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+. ++..+... . .|..+.+ .+.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEE-SVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhC
Confidence 4678999997 8999999998888998 7888777542 3222 22233321 1 2332211 12222332221
Q ss_pred CCccEEEEccCCh-------------------HhHHHHHHHhhcCCcEEEEEcC
Q 017336 257 GGVDRSVECTGNI-------------------DNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 257 ~~~d~vid~~g~~-------------------~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
+++|+++.+.|.. ..++.+.+.+..+ ++++.++.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 3689999887642 2334455555554 78888865
No 200
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.51 E-value=0.012 Score=53.52 Aligned_cols=75 Identities=13% Similarity=0.064 Sum_probs=51.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
.++++||+|+|+++.+++..+..+|+.+|+++.|+.+|.+.+.+ ++... +.... ..+.+.... ..+|+||+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence 57899999999999999999999999899999999887766543 43211 11111 101111111 268999999
Q ss_pred cCC
Q 017336 266 TGN 268 (373)
Q Consensus 266 ~g~ 268 (373)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 875
No 201
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.041 Score=48.64 Aligned_cols=79 Identities=24% Similarity=0.254 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
+++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+... + .|..+.+ .+.+.+.+.. -+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPA-SVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4689999997 8999999999999999 788888877655433 2233322 2 2332211 1222222211 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999875
No 202
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.039 Score=51.51 Aligned_cols=79 Identities=19% Similarity=0.265 Sum_probs=51.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.+++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ ++.|.... .|..+.. .+.+.+.+.. -+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence 4678999998 8999999999999999 788888888765543 33454332 2332221 1222222221 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 203
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.47 E-value=0.061 Score=44.25 Aligned_cols=88 Identities=15% Similarity=0.109 Sum_probs=54.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.+++|||+|+|.+|.--++.+...|+ .|++++ ++..+.+++++.-.. ...... +..-.++|+||-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~~~--------~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKTFS--------NDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-EecccC--------hhcCCCceEEEECCC
Confidence 56899999999999999988888999 788874 333333444542111 111111 111126899999998
Q ss_pred ChHhHHHHHHHhhcCCcEEEEE
Q 017336 268 NIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 268 ~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
. +..+..+...+.. +..+..
T Consensus 80 d-~e~N~~i~~~a~~-~~~vn~ 99 (157)
T PRK06719 80 Q-HAVNMMVKQAAHD-FQWVNV 99 (157)
T ss_pred C-HHHHHHHHHHHHH-CCcEEE
Confidence 8 5566666656554 434443
No 204
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.019 Score=51.24 Aligned_cols=79 Identities=23% Similarity=0.355 Sum_probs=51.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-ee--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++++||+|+ |.+|..++..+...|+ +|+++.++.++.+.+.+ .+.. .+ .|..+. ..+.+.+.+.. .+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY-QSIKAAVAHAETEAG 85 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHhcC
Confidence 4689999987 9999999999999999 89999888877654432 1221 12 232221 12333332221 23
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 78999999883
No 205
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.46 E-value=0.0092 Score=53.85 Aligned_cols=45 Identities=36% Similarity=0.425 Sum_probs=40.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 231 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~ 231 (373)
.+++++||+|+|+.+.+++.-++..|+.+++++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 357999999999999999999999998899999999988777655
No 206
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.45 E-value=0.031 Score=48.13 Aligned_cols=35 Identities=34% Similarity=0.358 Sum_probs=31.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
.+.+|+|+|+|++|..+++.+...|..++..++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 35789999999999999999999999899999876
No 207
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.065 Score=47.83 Aligned_cols=77 Identities=18% Similarity=0.220 Sum_probs=51.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cC-Cc-e--eecCCCCCccHHHHHHHH---cCCCcc
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VT-D--FVNTSEHDRPIQEVIAEM---TNGGVD 260 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg-~~-~--vi~~~~~~~~~~~~~~~~---~~~~~d 260 (373)
+++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ ++ .. . ..|..+.+ .+.+.+... ..+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence 57999987 8999999998888998 89999888877665543 32 11 1 23333321 133333332 134799
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999875
No 208
>PRK04148 hypothetical protein; Provisional
Probab=96.40 E-value=0.019 Score=45.45 Aligned_cols=86 Identities=20% Similarity=0.230 Sum_probs=63.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecC-CCCCccHHHHHHHHcCCCccEEEEc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT-SEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~-~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
.++.+++++|.| .|...+..+...|. .|++++.+++..+.+++.+.+.+.+- -+.+.++ -+++|+|+.+
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~--------y~~a~liysi 84 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEI--------YKNAKLIYSI 84 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHH--------HhcCCEEEEe
Confidence 356789999999 88755666667898 99999999999999999888665432 1222111 1279999999
Q ss_pred cCChHhHHHHHHHhhcC
Q 017336 266 TGNIDNMISAFECVHDG 282 (373)
Q Consensus 266 ~g~~~~~~~~~~~l~~~ 282 (373)
-..++.....++.-+.-
T Consensus 85 rpp~el~~~~~~la~~~ 101 (134)
T PRK04148 85 RPPRDLQPFILELAKKI 101 (134)
T ss_pred CCCHHHHHHHHHHHHHc
Confidence 88878777777766664
No 209
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.40 E-value=0.059 Score=46.63 Aligned_cols=108 Identities=20% Similarity=0.223 Sum_probs=75.5
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceee-cCCCCCccHHHHHHHHc
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFV-NTSEHDRPIQEVIAEMT 255 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi-~~~~~~~~~~~~~~~~~ 255 (373)
.+++..+.++||=+|.+ +|+.++.+|..+. -.++++++.++++.+.+++ .|.+..+ -....+ ..+.+.+..
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~ 129 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL 129 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence 34566688899888864 3777778887775 3389999999999888765 5765522 122122 666666644
Q ss_pred CCCccEEEEccC---ChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 256 NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 256 ~~~~d~vid~~g---~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
.+.||.||-=.. .+++++.+++.|+++ |.++.-+...
T Consensus 130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl~ 169 (219)
T COG4122 130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVLF 169 (219)
T ss_pred CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeeccc
Confidence 458999876444 457899999999997 8888765544
No 210
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.40 E-value=0.017 Score=54.63 Aligned_cols=84 Identities=23% Similarity=0.226 Sum_probs=60.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
.++++||+|+|-+|..++..+...|...|+++.|+.+|.. +++++|+..+ .. +.+..... .+|+||.++
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l--------~el~~~l~-~~DvVissT 246 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-AL--------EELLEALA-EADVVISST 246 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cH--------HHHHHhhh-hCCEEEEec
Confidence 6789999999999999999999999889999999987755 5577885432 11 22222222 589999999
Q ss_pred CChHh---HHHHHHHhhc
Q 017336 267 GNIDN---MISAFECVHD 281 (373)
Q Consensus 267 g~~~~---~~~~~~~l~~ 281 (373)
+.+.. -......++.
T Consensus 247 sa~~~ii~~~~ve~a~~~ 264 (414)
T COG0373 247 SAPHPIITREMVERALKI 264 (414)
T ss_pred CCCccccCHHHHHHHHhc
Confidence 98643 2244455555
No 211
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.40 E-value=0.025 Score=55.73 Aligned_cols=73 Identities=25% Similarity=0.222 Sum_probs=54.3
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
+.++++|+|+|.|..|++++++++..|+ +|++.+..+++.+.++++|+..+. ... ..+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~~----~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TSD----AVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Ccc----hHhHh-----hcCCEEEEC
Confidence 4578899999999999999999999999 899999877666667777874332 111 11111 147999999
Q ss_pred cCCh
Q 017336 266 TGNI 269 (373)
Q Consensus 266 ~g~~ 269 (373)
.|-+
T Consensus 78 pGi~ 81 (488)
T PRK03369 78 PGFR 81 (488)
T ss_pred CCCC
Confidence 8865
No 212
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.37 E-value=0.021 Score=51.17 Aligned_cols=78 Identities=24% Similarity=0.300 Sum_probs=51.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCce-e--ecCCCCCccHHHHHHHHcC--CCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~~~-v--i~~~~~~~~~~~~~~~~~~--~~~d 260 (373)
++++++|+|+ |++|..+++.+...|+ +|++++++.++.+.+.+. +... . .|..+.+ ...+.+++... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLD-DHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence 4689999987 8999999999989999 899998888776666543 3221 1 2222211 12222332221 3789
Q ss_pred EEEEccC
Q 017336 261 RSVECTG 267 (373)
Q Consensus 261 ~vid~~g 267 (373)
++|++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999986
No 213
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.35 E-value=0.03 Score=50.49 Aligned_cols=95 Identities=21% Similarity=0.262 Sum_probs=64.6
Q ss_pred hcccchhhhhhhhhhccC-CCCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc
Q 017336 168 ILSCGVSTGLGATLNVAK-PERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245 (373)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 245 (373)
..||+....+.. .+..+ --.|++|+|+|.| .+|.-+++++...|+ +|+++.+... +
T Consensus 137 ~~PcTp~ai~~l-l~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~-------------------~- 194 (286)
T PRK14175 137 FVPCTPLGIMEI-LKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK-------------------D- 194 (286)
T ss_pred CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch-------------------h-
Confidence 345544444443 33333 2478999999996 599999999999999 8888854311 0
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 246 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+. +.+. .+|+||.++|.+.++.. +.++++ ..++.+|...
T Consensus 195 -l~----~~~~-~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 195 -MA----SYLK-DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred -HH----HHHh-hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 21 2222 58999999999766655 468886 8888887753
No 214
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.34 E-value=0.057 Score=46.39 Aligned_cols=82 Identities=28% Similarity=0.288 Sum_probs=56.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
-.+++|+|+|.|.+|..+++.+...|+ +|++++++.++.+.+.+ +++.. ++..+ +.....|+++-|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~-----------l~~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATV-VAPEE-----------IYSVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEE-Ecchh-----------hccccCCEEEec
Confidence 367899999999999999999999999 89999998887666644 46532 22211 111157888866
Q ss_pred cCChHhHHHHHHHhhc
Q 017336 266 TGNIDNMISAFECVHD 281 (373)
Q Consensus 266 ~g~~~~~~~~~~~l~~ 281 (373)
......-...++.|+.
T Consensus 93 A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 93 ALGGVINDDTIPQLKA 108 (200)
T ss_pred ccccccCHHHHHHcCC
Confidence 5543444555566654
No 215
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.34 E-value=0.04 Score=50.14 Aligned_cols=43 Identities=23% Similarity=0.245 Sum_probs=37.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 230 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~ 230 (373)
.+++|+|+|+|++|.+++..+...|+.+|++++++.+|.+.+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la 168 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA 168 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 5689999999999999999999999988999999988766553
No 216
>PLN02366 spermidine synthase
Probab=96.33 E-value=0.044 Score=50.30 Aligned_cols=100 Identities=20% Similarity=0.126 Sum_probs=65.2
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC--------ceeecCCCCCccHHHHHHHHcCC
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--------TDFVNTSEHDRPIQEVIAEMTNG 257 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~--------~~vi~~~~~~~~~~~~~~~~~~~ 257 (373)
....++||++|+|. |.++..+++.-+..+|.+++.+++-.+.++++-. +++- ....+ ..+.+++..++
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~-vi~~D--a~~~l~~~~~~ 164 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVN-LHIGD--GVEFLKNAPEG 164 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceE-EEECh--HHHHHhhccCC
Confidence 34578999999876 5566777877666689999999887787777311 1110 00011 33334443344
Q ss_pred CccEEEEccCC----------hHhHHHHHHHhhcCCcEEEEEc
Q 017336 258 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 258 ~~d~vid~~g~----------~~~~~~~~~~l~~~~g~~v~~g 290 (373)
.+|+||.-... .++++.+.++|+++ |.++..+
T Consensus 165 ~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 165 TYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred CCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 79998764322 25688999999997 9987643
No 217
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.32 E-value=0.04 Score=41.81 Aligned_cols=91 Identities=22% Similarity=0.238 Sum_probs=58.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.+++|||+|+|.+|..-++.+...|+ +|++++... +..+ +.-.... .. +. +.. .++|+||-+.+
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-~~----~~----~~l-~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-RE----FE----EDL-DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-SS-----G----GGC-TTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-hh----HH----HHH-hhheEEEecCC
Confidence 57899999999999999999999999 899987765 2222 1111111 11 20 011 27999999999
Q ss_pred ChHhHHHHHHHhhcCCcEEEEEcCCCCC
Q 017336 268 NIDNMISAFECVHDGWGVAVLVGVPSKD 295 (373)
Q Consensus 268 ~~~~~~~~~~~l~~~~g~~v~~g~~~~~ 295 (373)
.+..-....+..+.. +..+...+....
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~ 96 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPEL 96 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCC
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCC
Confidence 866655666666654 888887665433
No 218
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.023 Score=50.96 Aligned_cols=79 Identities=19% Similarity=0.257 Sum_probs=50.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
+++++||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+ .+... + .|..+.+ .+.+.+.+.. -+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 5789999987 8999999999988999 89999888776554322 23221 2 2332221 1222222221 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 219
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.31 E-value=0.056 Score=47.39 Aligned_cols=91 Identities=21% Similarity=0.197 Sum_probs=61.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCc--EEEEEcCC----hhH--------HHHHHhcCCceeecCCCCCccHHHHHH
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS----SKR--------FEEAKKFGVTDFVNTSEHDRPIQEVIA 252 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~--~V~~~~~~----~~~--------~~~~~~lg~~~vi~~~~~~~~~~~~~~ 252 (373)
-.+++|+|+|+|..|.+++..+...|+. +++.++++ .++ .++++.++... . .. ++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~--~l~~~l- 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GG--TLKEAL- 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cC--CHHHHH-
Confidence 3568999999999999999999999997 89999988 343 33445543211 1 01 133333
Q ss_pred HHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336 253 EMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 253 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
.++|++|++++...+....++.|.++ ..++.+
T Consensus 96 ----~~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~l 127 (226)
T cd05311 96 ----KGADVFIGVSRPGVVKKEMIKKMAKD-PIVFAL 127 (226)
T ss_pred ----hcCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEe
Confidence 24899999997433345677778774 555443
No 220
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.026 Score=51.63 Aligned_cols=79 Identities=23% Similarity=0.323 Sum_probs=52.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC--cee---ecCCCCCccHHHHHHHHc--CCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDF---VNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~--~~v---i~~~~~~~~~~~~~~~~~--~~~ 258 (373)
.++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ ++++. ... .|..+.+ .+.+.+.+.. -++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence 4789999987 8999999999999999 899998988776554 44542 111 2332211 1222222221 137
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 221
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.30 E-value=0.03 Score=51.99 Aligned_cols=80 Identities=20% Similarity=0.205 Sum_probs=52.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cC-Cce---eecCCCCCccHHHHHHHHcCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FG-VTD---FVNTSEHDRPIQEVIAEMTNG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg-~~~---vi~~~~~~~~~~~~~~~~~~~ 257 (373)
.|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+ .+ ... ..|..+...+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4789999998 8999998888888899 79999999887665422 22 111 234432212234445554444
Q ss_pred -CccEEEEccCC
Q 017336 258 -GVDRSVECTGN 268 (373)
Q Consensus 258 -~~d~vid~~g~ 268 (373)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 57799998763
No 222
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.29 E-value=0.026 Score=50.52 Aligned_cols=79 Identities=22% Similarity=0.289 Sum_probs=51.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHHHHHHHHc--CCCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d 260 (373)
+++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ ++... . .|..+.. .+.+.+.+.. -+++|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYA-DNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHH-HHHHHHHHHHHhcCCCC
Confidence 4689999987 8999999999999999 79999898877666543 33211 1 2222211 1222233221 13799
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
++|++.|.
T Consensus 83 ~li~~ag~ 90 (263)
T PRK06200 83 CFVGNAGI 90 (263)
T ss_pred EEEECCCC
Confidence 99999873
No 223
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.26 E-value=0.024 Score=55.57 Aligned_cols=79 Identities=27% Similarity=0.356 Sum_probs=55.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh---------------------hHHHHHHhcCCceeecCCCCCc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR 245 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~---------------------~~~~~~~~lg~~~vi~~~~~~~ 245 (373)
..+++|+|+|+|+.|+.++..++..|+ .|++++..+ ...+.++++|++..++..-..
T Consensus 139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~- 216 (467)
T TIGR01318 139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR- 216 (467)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-
Confidence 367899999999999999999999999 788887653 345677889987655432211
Q ss_pred cHHHHHHHHcCCCccEEEEccCChH
Q 017336 246 PIQEVIAEMTNGGVDRSVECTGNID 270 (373)
Q Consensus 246 ~~~~~~~~~~~~~~d~vid~~g~~~ 270 (373)
++ .+.... .++|.||.++|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 00 111221 26999999999753
No 224
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.23 E-value=0.022 Score=50.88 Aligned_cols=79 Identities=27% Similarity=0.293 Sum_probs=51.8
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCc--ee--ecCCCCCccHHHHH---HHHcCC
Q 017336 187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT--DF--VNTSEHDRPIQEVI---AEMTNG 257 (373)
Q Consensus 187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~--~v--i~~~~~~~~~~~~~---~~~~~~ 257 (373)
-+++++||+|+ |.+|..++..+...|+ +|++++++++..+.+.+ ..-. .+ .|..+.. .+.+.+ .+.. +
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPA-QVERVFDTAVERF-G 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHH-HHHHHHHHHHHHh-C
Confidence 46789999998 8999999999999999 79999888766655443 2211 12 2322211 122222 2222 3
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|+||.+.|.
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 79999998875
No 225
>PRK00811 spermidine synthase; Provisional
Probab=96.23 E-value=0.035 Score=50.49 Aligned_cols=97 Identities=16% Similarity=0.151 Sum_probs=64.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC------C---ceeecCCCCCccHHHHHHHHcCC
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V---TDFVNTSEHDRPIQEVIAEMTNG 257 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg------~---~~vi~~~~~~~~~~~~~~~~~~~ 257 (373)
...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.- . ..+- ....+ ..+.+.. ..+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~-v~~~D--a~~~l~~-~~~ 149 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVE-LVIGD--GIKFVAE-TEN 149 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceE-EEECc--hHHHHhh-CCC
Confidence 3567999999876 666777777767669999999999888887631 1 1110 00111 3333433 344
Q ss_pred CccEEEEccCC----------hHhHHHHHHHhhcCCcEEEEE
Q 017336 258 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 258 ~~d~vid~~g~----------~~~~~~~~~~l~~~~g~~v~~ 289 (373)
.+|+||.-... .+++..+.+.|+++ |.++..
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 89998864321 35677889999997 998875
No 226
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.029 Score=50.72 Aligned_cols=79 Identities=24% Similarity=0.350 Sum_probs=52.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--e--ecCCCCCccHHHHHHHHcC--CCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--v--i~~~~~~~~~~~~~~~~~~--~~~d 260 (373)
.++++||+|+ |.+|.+.++.+...|+ +|++++++.++.+.+.+..... . .|..+.+ .+.+.+.+... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence 3578999987 8999999999888999 8999999888776665532221 1 2332221 12222222211 3689
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
+++++.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 227
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.20 E-value=0.031 Score=50.39 Aligned_cols=70 Identities=23% Similarity=0.138 Sum_probs=50.6
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEE
Q 017336 185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 263 (373)
Q Consensus 185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vi 263 (373)
....+++++|+|+|+.+.+++..+...|+.+|+++.|+.++.+.+.+ ++.. +...+ ....+|+||
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence 34456799999999999999999999999889999999887766643 4321 10011 112589999
Q ss_pred EccCC
Q 017336 264 ECTGN 268 (373)
Q Consensus 264 d~~g~ 268 (373)
+|+.-
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 99753
No 228
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.036 Score=49.93 Aligned_cols=78 Identities=24% Similarity=0.340 Sum_probs=51.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC-Cce-eecCCCCCccHHHHHHHHcC--CCccEE
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDRS 262 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg-~~~-vi~~~~~~~~~~~~~~~~~~--~~~d~v 262 (373)
++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++ +.. ..|..+.+ .+.+.+.+... +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 578999998 8999999998888899 788888888776554 3344 222 22333321 12222222211 379999
Q ss_pred EEccCC
Q 017336 263 VECTGN 268 (373)
Q Consensus 263 id~~g~ 268 (373)
|++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999873
No 229
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.15 E-value=0.052 Score=51.78 Aligned_cols=90 Identities=27% Similarity=0.364 Sum_probs=58.6
Q ss_pred EEEECCCHHHHHHHHHHHHcCCc-EEEEEcCChhHHHHHHh--cCC--ce-eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 192 VAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK--FGV--TD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 192 vlI~G~g~~G~~ai~la~~~g~~-~V~~~~~~~~~~~~~~~--lg~--~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
|+|+|+|.+|..+++.+.+.+-. +|++.+++.++.+.+.+ .+. .. .+|..+ . +.+.++.. +.|+||+|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~----~-~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND----P-ESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT----H-HHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC----H-HHHHHHHh-cCCEEEEC
Confidence 78999999999999999877643 89999999999777654 222 22 233322 2 23555544 46999999
Q ss_pred cCChHhHHHHHHHhhcCCcEEEE
Q 017336 266 TGNIDNMISAFECVHDGWGVAVL 288 (373)
Q Consensus 266 ~g~~~~~~~~~~~l~~~~g~~v~ 288 (373)
+|.......+..|+..+ -.++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 98755556667777775 66665
No 230
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.031 Score=49.73 Aligned_cols=78 Identities=22% Similarity=0.288 Sum_probs=50.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce---eecCCCCCccHHHHHH---HHcC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIA---EMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~---vi~~~~~~~~~~~~~~---~~~~ 256 (373)
.++++||+|+ |++|.+++..+...|+ +|+.++++.++.+.+.+ .+... ..|..+.+ .+.+.+. +..
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~- 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ-QVTSMLDQVTAEL- 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHh-
Confidence 4789999997 8999999999999999 89999888776554432 23221 12332221 1222222 222
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|+++++.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 379999998773
No 231
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.038 Score=49.18 Aligned_cols=73 Identities=14% Similarity=0.153 Sum_probs=49.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-e--ecCCCCCccHHHHHHHHcCCCcc
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMTNGGVD 260 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~~~~~d 260 (373)
++++||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+.+ .+... + .|..+. +.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA-----IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH-----HHHHHHhcCCCC
Confidence 468999998 8999999999999999 88888887766554432 23221 1 232221 223333334899
Q ss_pred EEEEccC
Q 017336 261 RSVECTG 267 (373)
Q Consensus 261 ~vid~~g 267 (373)
++|++.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999987
No 232
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.03 Score=49.83 Aligned_cols=78 Identities=26% Similarity=0.278 Sum_probs=51.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--e--ecCCCCCccHHH---HHHHHcCCCc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQE---VIAEMTNGGV 259 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--v--i~~~~~~~~~~~---~~~~~~~~~~ 259 (373)
+++++||+|+ |.+|...++.+...|+ +|+.++++.+..+...++.... . .|..+.. .+.+ .+.+.. +++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~-~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQ-SVEAAVAAVISAF-GRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHH-HHHHHHHHHHHHh-CCC
Confidence 4689999997 8999999999888999 7999988877655555543221 1 2322211 1222 222222 378
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|++|.+.|.
T Consensus 91 d~vi~~ag~ 99 (255)
T PRK06841 91 DILVNSAGV 99 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 233
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.13 E-value=0.029 Score=57.25 Aligned_cols=76 Identities=28% Similarity=0.340 Sum_probs=56.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh---------------------HHHHHHhcCCceeecCCCC-Cc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-DR 245 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~---------------------~~~~~~~lg~~~vi~~~~~-~~ 245 (373)
.+++|+|+|+|..|+.++..+++.|+ +|+++++.+. +.+.++++|++..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 7888876652 5667788898766554321 11
Q ss_pred cHHHHHHHHcCCCccEEEEccCCh
Q 017336 246 PIQEVIAEMTNGGVDRSVECTGNI 269 (373)
Q Consensus 246 ~~~~~~~~~~~~~~d~vid~~g~~ 269 (373)
.+ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 12 1221 2699999999974
No 234
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.037 Score=49.03 Aligned_cols=78 Identities=26% Similarity=0.301 Sum_probs=49.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-h---cCCce---eecCCCCCccHHH---HHHHHcC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVTD---FVNTSEHDRPIQE---VIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~---lg~~~---vi~~~~~~~~~~~---~~~~~~~ 256 (373)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. + .+... ..|..+.. .+.+ .+.+..
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~- 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPD-SAKAMADATVSAF- 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHh-
Confidence 4678999998 9999999998888998 8999988876543332 2 22211 12322211 1222 222222
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 369999999883
No 235
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.042 Score=49.14 Aligned_cols=81 Identities=25% Similarity=0.342 Sum_probs=51.7
Q ss_pred CCCCCEEEEECC-C-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----cCCcee----ecCCCCCccHHHHHHHH
Q 017336 186 PERGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF----VNTSEHDRPIQEVIAEM 254 (373)
Q Consensus 186 ~~~~~~vlI~G~-g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----lg~~~v----i~~~~~~~~~~~~~~~~ 254 (373)
+..++++||+|+ | ++|.++++.+...|+ +|+++++++++.+...+ ++...+ .|..+.+ .+.+.+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA-QVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH-HHHHHHHHH
Confidence 345789999987 6 799999999999999 78888887766544322 443222 2322211 122222221
Q ss_pred c--CCCccEEEEccCC
Q 017336 255 T--NGGVDRSVECTGN 268 (373)
Q Consensus 255 ~--~~~~d~vid~~g~ 268 (373)
. .+++|++|++.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 1 1479999999984
No 236
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.09 E-value=0.11 Score=44.29 Aligned_cols=105 Identities=19% Similarity=0.326 Sum_probs=62.2
Q ss_pred hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC
Q 017336 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 256 (373)
Q Consensus 181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~ 256 (373)
.....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++...+.... .+ ..+.+....
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~-~d--~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE-GS--APECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE-Cc--hHHHHhhCC-
Confidence 4445677888888887754 4455566655432389999999988777654 5554321111 11 222222221
Q ss_pred CCccE-EEEccCC-hHhHHHHHHHhhcCCcEEEEEcC
Q 017336 257 GGVDR-SVECTGN-IDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 257 ~~~d~-vid~~g~-~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
..+|. .++.... ...+..+.+.|+++ |+++....
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 22344 4443222 36788999999997 99887743
No 237
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.09 E-value=0.088 Score=46.75 Aligned_cols=79 Identities=25% Similarity=0.314 Sum_probs=49.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+... . .|..+.+ .+.+.+.+.. .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEE-AINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence 3579999987 8999999998888899 8999988877654432 223321 1 2322211 1222222221 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|.+.+.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 238
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.046 Score=49.08 Aligned_cols=79 Identities=19% Similarity=0.311 Sum_probs=50.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCce-e--ecCCCCCccHHHHHHHHc-CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-F--VNTSEHDRPIQEVIAEMT-NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g~~~-v--i~~~~~~~~~~~~~~~~~-~~ 257 (373)
.++++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+.+ + +... . .|..+.+ +..+.+.+.. -+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE-DLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHHHHhhC
Confidence 4789999987 8999999999999999 89999888776554432 2 3221 1 2332221 1222222221 24
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|+++++.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999999874
No 239
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.045 Score=48.82 Aligned_cols=78 Identities=17% Similarity=0.162 Sum_probs=50.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCC----ce-eecCCCCCccHHHHHHHHcC--CCc
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV----TD-FVNTSEHDRPIQEVIAEMTN--GGV 259 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~----~~-vi~~~~~~~~~~~~~~~~~~--~~~ 259 (373)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ +.. .. ..|..+. ..+.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDA-DALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH-HHHHHHHHHHHHhCCCC
Confidence 468999987 8999999999888899 89999888877655433 321 11 1233221 123333333221 368
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998773
No 240
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.02 E-value=0.16 Score=45.59 Aligned_cols=103 Identities=17% Similarity=0.203 Sum_probs=59.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-------------------hH----HHHHHhcCCce-eecCCCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KR----FEEAKKFGVTD-FVNTSEH 243 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-------------------~~----~~~~~~lg~~~-vi~~~~~ 243 (373)
.+.+|+|+|+|++|..++..+-+.|..+++.++.+. .| .+.+++++.+. +....+.
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 457899999999999999999999988898887652 01 12223344322 2111111
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
- ..+.+.++....+|+||||.+....-....+......-.++..|..
T Consensus 109 i--~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa 155 (268)
T PRK15116 109 I--TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA 155 (268)
T ss_pred c--ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence 0 0122333443479999999987443333333333321445555543
No 241
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.089 Score=47.40 Aligned_cols=76 Identities=22% Similarity=0.305 Sum_probs=48.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce----eecCCCCCccHH---HHHHHHcCC
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQ---EVIAEMTNG 257 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~----vi~~~~~~~~~~---~~~~~~~~~ 257 (373)
++++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+... ..|..+.. .+. +.+.+.. +
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~-~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAH-G 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhc-C
Confidence 36899987 8999999999988999 788888877664433 2233321 13333221 122 2222222 3
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 78 ~id~lv~~ag~ 88 (272)
T PRK07832 78 SMDVVMNIAGI 88 (272)
T ss_pred CCCEEEECCCC
Confidence 69999999874
No 242
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.01 E-value=0.083 Score=49.29 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=31.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 223 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~ 223 (373)
..+|+|+|+|++|..++..+-+.|..++..++.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46899999999999999999999998899898763
No 243
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.01 E-value=0.024 Score=48.58 Aligned_cols=97 Identities=15% Similarity=0.246 Sum_probs=61.5
Q ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHH-cCC
Q 017336 183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEM-TNG 257 (373)
Q Consensus 183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~-~~~ 257 (373)
.....++.+||-+|+|. |..++.+++. |+ +|++++.+++..+.+++. +...+ .....+ + .+. ..+
T Consensus 25 ~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d--~----~~~~~~~ 94 (197)
T PRK11207 25 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD--L----NNLTFDG 94 (197)
T ss_pred hcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC--h----hhCCcCC
Confidence 34455678999999876 6677777765 77 899999998877666542 32211 111011 1 111 123
Q ss_pred CccEEEEccC----C----hHhHHHHHHHhhcCCcEEEEEc
Q 017336 258 GVDRSVECTG----N----IDNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 258 ~~d~vid~~g----~----~~~~~~~~~~l~~~~g~~v~~g 290 (373)
.||+|+.... . ...+..+.+.|+++ |.++++.
T Consensus 95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 7999997633 1 25677888999997 9865543
No 244
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.99 E-value=0.053 Score=49.58 Aligned_cols=79 Identities=27% Similarity=0.429 Sum_probs=50.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi--~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ .+... ++ |..+.+ .+.+.+.... -+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~-~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLD-AVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 3578999987 8999999998888899 89999998876554432 33322 22 222211 1222222211 23
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 245
>PRK01581 speE spermidine synthase; Validated
Probab=95.99 E-value=0.13 Score=47.92 Aligned_cols=99 Identities=15% Similarity=0.081 Sum_probs=64.7
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-----------CceeecCCCCCccHHHHHHHH
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----------VTDFVNTSEHDRPIQEVIAEM 254 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-----------~~~vi~~~~~~~~~~~~~~~~ 254 (373)
....++|||+|+|. |.++..+++..+..+|++++.+++-.+.++++. .+++-... .+ ..+.+..
T Consensus 148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi-~D--a~~fL~~- 222 (374)
T PRK01581 148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV-CD--AKEFLSS- 222 (374)
T ss_pred CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE-Cc--HHHHHHh-
Confidence 34457999999764 556677777666669999999999999988631 11110000 11 3344433
Q ss_pred cCCCccEEEEccCC-----------hHhHHHHHHHhhcCCcEEEEEc
Q 017336 255 TNGGVDRSVECTGN-----------IDNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 255 ~~~~~d~vid~~g~-----------~~~~~~~~~~l~~~~g~~v~~g 290 (373)
..+.||+||--... .+++..+.+.|+++ |.++...
T Consensus 223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs 268 (374)
T PRK01581 223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS 268 (374)
T ss_pred cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 33479997765322 24778999999997 9987764
No 246
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.98 E-value=0.057 Score=49.75 Aligned_cols=92 Identities=26% Similarity=0.410 Sum_probs=61.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336 190 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 268 (373)
Q Consensus 190 ~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 268 (373)
.+|.|+|+|.+|...++.++..|. ..|+++++++++.+.+++.|....+. .+ ..+.+ ...|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~--~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TS--AAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CC--HHHHh-----cCCCEEEECCCH
Confidence 679999999999999988888874 37999999999888888887532111 11 11111 258999999976
Q ss_pred hHh---HHHHHHHhhcCCcEEEEEcCC
Q 017336 269 IDN---MISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 269 ~~~---~~~~~~~l~~~~g~~v~~g~~ 292 (373)
... +......++++ ..++.+|..
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs~ 102 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGSV 102 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCccc
Confidence 322 23333455664 666665543
No 247
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.11 Score=46.75 Aligned_cols=78 Identities=17% Similarity=0.251 Sum_probs=49.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHHHHHHHHc--CCCccE
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDR 261 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d~ 261 (373)
+++|||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ ++... . .|..+.. .+.+.+.... -+++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRA-AVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 468999987 8999999988888898 79999888877665544 22211 1 2222211 1222222221 137899
Q ss_pred EEEccCC
Q 017336 262 SVECTGN 268 (373)
Q Consensus 262 vid~~g~ 268 (373)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 248
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.96 E-value=0.32 Score=42.28 Aligned_cols=117 Identities=11% Similarity=0.027 Sum_probs=64.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
++.+|||+|+|.++.-=+..+...|+ +|.+++..- +....+.+.|--..+. ...... .+ .++++||-++
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~~~~~------dl--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GNYDKE------FI--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CCCChH------Hh--CCCcEEEECC
Confidence 56899999999999988888888999 788885432 2222222223222221 111100 11 3789999999
Q ss_pred CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEe
Q 017336 267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF 315 (373)
Q Consensus 267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 315 (373)
+.++.-.......+.. +.++...+......+.++...-...++|--+.
T Consensus 94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~PAiv~rg~l~IaIST 141 (223)
T PRK05562 94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCIIPYQRSTKNFVFALNT 141 (223)
T ss_pred CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEeeeEEecCCEEEEEEC
Confidence 9854444444444443 66666544333333333332112445554333
No 249
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.96 E-value=0.055 Score=47.88 Aligned_cols=79 Identities=25% Similarity=0.342 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCce-e--ecCCCCCccHHHHHHHHc--CCCc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV 259 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~ 259 (373)
.++++||+|+ |.+|..++..+...|+ +|+.+++++. ..+.+++++... + .|..+.+ .+...+.+.. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIE-AIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHHcCCC
Confidence 4789999998 8999999999988999 8888877652 233344455322 2 2322221 1222232221 1369
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 250
>PRK06128 oxidoreductase; Provisional
Probab=95.96 E-value=0.12 Score=47.36 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=60.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--H----HHHHHhcCCcee---ecCCCCCccHHHHHHHHc--
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--R----FEEAKKFGVTDF---VNTSEHDRPIQEVIAEMT-- 255 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~----~~~~~~lg~~~v---i~~~~~~~~~~~~~~~~~-- 255 (373)
.++++||+|+ |.+|.+++..+...|+ +|+.+.++.+ + .+.+++.+.... .|..+.+ .+.+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEA-FCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHH-HHHHHHHHHHHH
Confidence 4689999987 8999999999988999 7777655432 1 223334454322 2222211 1222222221
Q ss_pred CCCccEEEEccCCh--------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 256 NGGVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 256 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
-+++|++|++.|.. ...+.+.+.|..+ ++++.++...
T Consensus 132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~~ 194 (300)
T PRK06128 132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSIQ 194 (300)
T ss_pred hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCcc
Confidence 13799999988731 0223344455665 8998887643
No 251
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.95 E-value=0.091 Score=46.06 Aligned_cols=106 Identities=23% Similarity=0.270 Sum_probs=72.7
Q ss_pred hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHH
Q 017336 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM 254 (373)
Q Consensus 180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~ 254 (373)
+....++.||++|+=.|.|. |.+++-||+..|. .+|+..+..++..+.+++ +|....+.....| ..+..
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D--v~~~~--- 159 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD--VREGI--- 159 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc--ccccc---
Confidence 34568899999999887765 7778888887764 589999999988777754 4554322111111 21111
Q ss_pred cCCCccEEE-EccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336 255 TNGGVDRSV-ECTGNIDNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 255 ~~~~~d~vi-d~~g~~~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
....||+|| |.-.-.+.++.+.+.|+++ |.++.+...
T Consensus 160 ~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~ 197 (256)
T COG2519 160 DEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPT 197 (256)
T ss_pred cccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCC
Confidence 112688755 5555558899999999997 999988654
No 252
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=95.95 E-value=0.059 Score=48.80 Aligned_cols=100 Identities=24% Similarity=0.325 Sum_probs=62.8
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCCCccE
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR 261 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~ 261 (373)
.+++++||=+|+|. |.++|.. ..+|+.+|++++.++...+.+++ -++...+..... .......++.||+
T Consensus 160 ~~~g~~vlDvGcGS-GILaIAa-~kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~-----~~~~~~~~~~~Dv 232 (300)
T COG2264 160 LKKGKTVLDVGCGS-GILAIAA-AKLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGF-----LLLEVPENGPFDV 232 (300)
T ss_pred hcCCCEEEEecCCh-hHHHHHH-HHcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccc-----cchhhcccCcccE
Confidence 56889999898854 5555543 45688799999999877666654 233211101111 1112223348999
Q ss_pred EEEccCCh---HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 262 SVECTGNI---DNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 262 vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
|+-..=-. .+.+...+.++|+ |++++-|...
T Consensus 233 IVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~ 266 (300)
T COG2264 233 IVANILAEVLVELAPDIKRLLKPG-GRLILSGILE 266 (300)
T ss_pred EEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence 88654221 3566888999997 9999988764
No 253
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=95.95 E-value=0.039 Score=49.59 Aligned_cols=99 Identities=20% Similarity=0.107 Sum_probs=71.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
+..+|.|+|+|.+|.-++.+|.-+|+ .|...+.+.+|++.+..+-..++....+. ...+.+... ++|++|.++=
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st----~~~iee~v~-~aDlvIgaVL 240 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST----PSNIEEAVK-KADLVIGAVL 240 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC----HHHHHHHhh-hccEEEEEEE
Confidence 45678889999999999999999999 89999999999999887544443222221 122333322 5899998643
Q ss_pred Ch------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 268 NI------DNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 268 ~~------~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
-+ -..++.++.|+++ +.++.+..-.
T Consensus 241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDq 271 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ 271 (371)
T ss_pred ecCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence 21 2466889999997 9998887654
No 254
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.056 Score=48.37 Aligned_cols=78 Identities=24% Similarity=0.400 Sum_probs=49.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c--CCc-eee--cCCCCC--ccHHHHHHHHcCCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFV--NTSEHD--RPIQEVIAEMTNGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l--g~~-~vi--~~~~~~--~~~~~~~~~~~~~~ 258 (373)
+++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ + +.. ..+ |..+.. ..+.+.+.+ .++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~ 80 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG 80 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence 4678999987 8999999998888999 79999898876655532 2 211 112 222211 011122222 247
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|+++.+.|.
T Consensus 81 id~lv~~ag~ 90 (263)
T PRK09072 81 INVLINNAGV 90 (263)
T ss_pred CCEEEECCCC
Confidence 8999999875
No 255
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.95 E-value=0.046 Score=48.35 Aligned_cols=79 Identities=23% Similarity=0.306 Sum_probs=50.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcC--Cce-e--ecCCCCCccHHHHHHHH--cCCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG--VTD-F--VNTSEHDRPIQEVIAEM--TNGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg--~~~-v--i~~~~~~~~~~~~~~~~--~~~~ 258 (373)
.++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+. ... . .|..+.+ .+...+.+. ..++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEA-DVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhCC
Confidence 4578999998 8999999999888899 7999999887655442 222 211 1 2222211 122222221 1137
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|+||.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 256
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.93 E-value=0.052 Score=48.36 Aligned_cols=79 Identities=22% Similarity=0.281 Sum_probs=48.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRS 262 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~v 262 (373)
.++++||+|+ |++|.+.++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+.. .+.+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNRD-QVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 4689999987 8999999999988999 6766644 3444444544444322 2333221 1222233221 1379999
Q ss_pred EEccCC
Q 017336 263 VECTGN 268 (373)
Q Consensus 263 id~~g~ 268 (373)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998874
No 257
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.033 Score=49.04 Aligned_cols=80 Identities=28% Similarity=0.390 Sum_probs=51.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCC-c--e-eecCCCC-C---ccHHHHHHHH
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV-T--D-FVNTSEH-D---RPIQEVIAEM 254 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~-~--~-vi~~~~~-~---~~~~~~~~~~ 254 (373)
++++++|+|+ |.+|...++.+...|+ +|+++++++++.+.+. +.+. . . -.|..+. . ..+.+.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4579999987 8999999999988999 7999999887655432 2221 1 1 1232211 1 1123334444
Q ss_pred cCCCccEEEEccCC
Q 017336 255 TNGGVDRSVECTGN 268 (373)
Q Consensus 255 ~~~~~d~vid~~g~ 268 (373)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 43478999999884
No 258
>PLN03075 nicotianamine synthase; Provisional
Probab=95.92 E-value=0.064 Score=48.64 Aligned_cols=98 Identities=13% Similarity=0.104 Sum_probs=65.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhcC-----CceeecCCCCCccHHHHHHHHcCCCccE
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMTNGGVDR 261 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~lg-----~~~vi~~~~~~~~~~~~~~~~~~~~~d~ 261 (373)
++++|+-+|+|+.++.++-+++... ..++++++.+++..+.+++.- ...-+.+...+ ..+... ..++||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~~~~--~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMDVTE--SLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhhccc--ccCCcCE
Confidence 7799999999999998888886553 238999999999888887632 22222222222 111100 1247999
Q ss_pred EEEcc-------CChHhHHHHHHHhhcCCcEEEEEc
Q 017336 262 SVECT-------GNIDNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 262 vid~~-------g~~~~~~~~~~~l~~~~g~~v~~g 290 (373)
||-.+ .....+....+.|+++ |.+++-.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 99875 2235688999999996 7776543
No 259
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.91 E-value=0.051 Score=48.09 Aligned_cols=78 Identities=21% Similarity=0.361 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHcC--C
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~~--~ 257 (373)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+ +..+... . .|..+.+ .+.+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEE-DVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence 4789999997 9999999999999999 799998887665433 2334332 1 2222211 12222332221 3
Q ss_pred CccEEEEccC
Q 017336 258 GVDRSVECTG 267 (373)
Q Consensus 258 ~~d~vid~~g 267 (373)
++|++|++.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 260
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.90 E-value=0.067 Score=47.00 Aligned_cols=78 Identities=18% Similarity=0.243 Sum_probs=49.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCcee-ecCCCCCccHHHHHHHHcC--CCccEEE
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV 263 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~~--~~~d~vi 263 (373)
++++||+|+ |++|..+++.+...|+ +|+.+++++++ .+.+++.++..+ .|..+.+ ...+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTNA-GIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCHH-HHHHHHHHHHhhCCCccEEE
Confidence 468999987 8999999999888999 88888876543 344445554322 2332211 12222322221 3699999
Q ss_pred EccCC
Q 017336 264 ECTGN 268 (373)
Q Consensus 264 d~~g~ 268 (373)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 261
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.054 Score=47.89 Aligned_cols=79 Identities=22% Similarity=0.368 Sum_probs=51.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee---ecCCCCC--ccHHHHHHHHcCCCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF---VNTSEHD--RPIQEVIAEMTNGGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~~~d 260 (373)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++.... .|..+.. ..+.+.+.+.. +++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF-GRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence 4679999997 8999999999999999 899998887665443 44554321 2222211 01222222222 3789
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
++|++.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998874
No 262
>PRK06196 oxidoreductase; Provisional
Probab=95.87 E-value=0.06 Score=49.77 Aligned_cols=79 Identities=19% Similarity=0.289 Sum_probs=50.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC-Cce-eecCCCCCccHHHHHHHHcC--CCccE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG-VTD-FVNTSEHDRPIQEVIAEMTN--GGVDR 261 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg-~~~-vi~~~~~~~~~~~~~~~~~~--~~~d~ 261 (373)
.+++|||+|+ |++|.+++..+...|+ +|++++++.++.+.+ +++. +.. ..|..+.+ .+.+.+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~-~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLE-SVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHH-HHHHHHHHHHhcCCCCCE
Confidence 4689999998 8999999998888999 788888887765543 2232 221 12322211 12222333222 37999
Q ss_pred EEEccCC
Q 017336 262 SVECTGN 268 (373)
Q Consensus 262 vid~~g~ 268 (373)
+|++.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9998873
No 263
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.86 E-value=0.1 Score=48.46 Aligned_cols=94 Identities=17% Similarity=0.175 Sum_probs=64.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCcEEEEEcCChhHHHHHHh-----cCCceeecCCCCCccHHHHHHHHcCCCcc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVDRSSKRFEEAKK-----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD 260 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la-~~~g~~~V~~~~~~~~~~~~~~~-----lg~~~vi~~~~~~~~~~~~~~~~~~~~~d 260 (373)
+..++++|+|+|..|...+..+ ...++++|.+++++.++.+.+.+ ++.... .+++ +.+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~-~~~~----~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIY-VVNS----ADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEE-EeCC----HHHHH-----hcCC
Confidence 4567899999999998766544 46688899999999887665432 344321 1221 22222 2589
Q ss_pred EEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 261 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 261 ~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+|+.|+++.. .... .+++++ -.+..+|...
T Consensus 195 iVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred EEEEccCCCC-cchH-HhcCCC-cEEEecCCCC
Confidence 9999998853 3344 899996 8888888754
No 264
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.86 E-value=0.069 Score=48.14 Aligned_cols=79 Identities=27% Similarity=0.360 Sum_probs=58.4
Q ss_pred CCCCEEEEECC-CHHHHH-HHHHHHHcCCcEEEEEcCChhHHHHHH-----hcCCc---eeecCCCCCccHHHHHHHHcC
Q 017336 187 ERGSSVAVFGL-GAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVT---DFVNTSEHDRPIQEVIAEMTN 256 (373)
Q Consensus 187 ~~~~~vlI~G~-g~~G~~-ai~la~~~g~~~V~~~~~~~~~~~~~~-----~lg~~---~vi~~~~~~~~~~~~~~~~~~ 256 (373)
+-|++.+|+|+ .++|.+ +-++|+ .|. +|+.++|+++|++..+ +.++. .++|+..++. ..+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 34688999998 589976 667777 899 7999999999987764 34542 2567777664 4566666666
Q ss_pred C-CccEEEEccCC
Q 017336 257 G-GVDRSVECTGN 268 (373)
Q Consensus 257 ~-~~d~vid~~g~ 268 (373)
+ .+-+.++++|-
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 6 77889999884
No 265
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.047 Score=48.93 Aligned_cols=79 Identities=28% Similarity=0.362 Sum_probs=50.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-----c-CCce---eecCCCCCccHHHHHHHHc--
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----F-GVTD---FVNTSEHDRPIQEVIAEMT-- 255 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-----l-g~~~---vi~~~~~~~~~~~~~~~~~-- 255 (373)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+ . +... ..|..+.+ .+.+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence 4689999998 8999999999999999 79999898776554322 1 1111 12332221 1222222221
Q ss_pred CCCccEEEEccCC
Q 017336 256 NGGVDRSVECTGN 268 (373)
Q Consensus 256 ~~~~d~vid~~g~ 268 (373)
-+++|++|++.|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 1379999999874
No 266
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.86 E-value=0.053 Score=48.25 Aligned_cols=79 Identities=25% Similarity=0.352 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce---eecCCCCCccHHHHHHHHcC--C
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTN--G 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~---vi~~~~~~~~~~~~~~~~~~--~ 257 (373)
+++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+... ..|..+.+ .+...+.+... +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDED-QCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHH-HHHHHHHHHHHHcC
Confidence 5689999987 8999999999999999 89999888766544432 23221 12322211 12222222211 3
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998874
No 267
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.055 Score=48.15 Aligned_cols=79 Identities=19% Similarity=0.292 Sum_probs=50.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++.+.+. .+ |..+.+ ...+.+.+.. -+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEA-YAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHhcC
Confidence 4678999987 8999999999989999 799888887765543 2234322 12 222211 1222222221 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 268
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.075 Score=46.82 Aligned_cols=79 Identities=25% Similarity=0.265 Sum_probs=50.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHHcC--C
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~~~--~ 257 (373)
..+++||+|+ |.+|..++..+...|+ +|+++++++++.+.+. +.+... + .|..+.+ .+.+.+..... +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPE-AIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4578999987 8999999999999999 8999999876654432 223221 1 2322211 12222332211 3
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
+.|+++.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 68999999874
No 269
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.85 E-value=0.068 Score=44.00 Aligned_cols=79 Identities=28% Similarity=0.344 Sum_probs=48.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC--hhHHHHH----HhcCCce-eecCCCCC-ccHHHHHHHHc--CCC
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS--SKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG 258 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~--~~~~~~~----~~lg~~~-vi~~~~~~-~~~~~~~~~~~--~~~ 258 (373)
|++||+|+ +++|...++.+...|..+|+.+.++ .++.+.+ ++.+... ++..+-.+ ..+.+.+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57899987 8999998888877777688888888 3433332 3345322 22222111 11222333322 237
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999998885
No 270
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.055 Score=48.08 Aligned_cols=78 Identities=22% Similarity=0.313 Sum_probs=49.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-ee--cCCCCCccHHHHHHHHc--CCC
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi--~~~~~~~~~~~~~~~~~--~~~ 258 (373)
++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+... .+ |..+. ..+.+.+.+.. -++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP-EDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHHhCC
Confidence 478999987 8999999999999999 89999888766554432 23221 22 22221 11222222221 136
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|++.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
No 271
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.85 E-value=0.18 Score=41.72 Aligned_cols=90 Identities=21% Similarity=0.266 Sum_probs=59.4
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336 190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 269 (373)
Q Consensus 190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 269 (373)
.+|.++|.|.+|...++-+...|+ +|.+.++++++.+.+.+.|+... + + ..+.+. ..|+||-|+...
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~--s----~~e~~~-----~~dvvi~~v~~~ 68 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-D--S----PAEAAE-----QADVVILCVPDD 68 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-S--S----HHHHHH-----HBSEEEE-SSSH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-h--h----hhhHhh-----cccceEeecccc
Confidence 368899999999999999889999 89999999999999888885432 1 1 222222 359999998886
Q ss_pred HhHHHHHH------HhhcCCcEEEEEcCCC
Q 017336 270 DNMISAFE------CVHDGWGVAVLVGVPS 293 (373)
Q Consensus 270 ~~~~~~~~------~l~~~~g~~v~~g~~~ 293 (373)
......+. .+.++ ..++.++..+
T Consensus 69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT~~ 97 (163)
T PF03446_consen 69 DAVEAVLFGENILAGLRPG-KIIIDMSTIS 97 (163)
T ss_dssp HHHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred hhhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence 65554443 34554 5666665543
No 272
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.84 E-value=0.07 Score=43.53 Aligned_cols=95 Identities=22% Similarity=0.266 Sum_probs=58.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH-HHhcCCce-eecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE 264 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~-~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid 264 (373)
..+++++|+|+|.+|...++.+...|...|++++++.++.+. +++++... .....+ .. +. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~----~~----~~-~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD----LE----EL-LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc----hh----hc-cccCCEEEe
Confidence 456889999999999999988888864489999988776654 44555421 011111 11 11 137899999
Q ss_pred ccCChHh----HHHHHHHhhcCCcEEEEEcC
Q 017336 265 CTGNIDN----MISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 265 ~~g~~~~----~~~~~~~l~~~~g~~v~~g~ 291 (373)
|++.... .......++++ ..++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence 9887432 11122345554 55555544
No 273
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.84 E-value=0.04 Score=56.38 Aligned_cols=77 Identities=23% Similarity=0.291 Sum_probs=53.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh---------------------HHHHHHhcCCceeecCCC-CC
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSE-HD 244 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~---------------------~~~~~~~lg~~~vi~~~~-~~ 244 (373)
..+++|+|+|+|+.|+.++..+.+.|+ +|+++++.+. ..+.++++|++...+..- .+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 7888876532 355667788765433211 11
Q ss_pred ccHHHHHHHHcCCCccEEEEccCCh
Q 017336 245 RPIQEVIAEMTNGGVDRSVECTGNI 269 (373)
Q Consensus 245 ~~~~~~~~~~~~~~~d~vid~~g~~ 269 (373)
..+ .... .++|.||.++|..
T Consensus 404 i~~----~~~~-~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISL----ESLL-EDYDAVFVGVGTY 423 (654)
T ss_pred CCH----HHHH-hcCCEEEEeCCCC
Confidence 111 1111 2699999998863
No 274
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.057 Score=48.72 Aligned_cols=77 Identities=17% Similarity=0.257 Sum_probs=50.2
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCce-e--ecCCCCCccHHHHHHHHc--CCCccEE
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDRS 262 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d~v 262 (373)
+++||+|+ |.+|...++.+...|+ +|+++.++.++.+.+++. +... + .|..+.+ .+.+.+.+.. .+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA-AVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence 67999987 9999999998888898 899998988776665442 2211 1 2222211 1223333221 1378999
Q ss_pred EEccCC
Q 017336 263 VECTGN 268 (373)
Q Consensus 263 id~~g~ 268 (373)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999874
No 275
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.83 E-value=0.079 Score=46.74 Aligned_cols=106 Identities=15% Similarity=0.161 Sum_probs=68.0
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc-
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 255 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~- 255 (373)
...+..+.++||=+|.|. |..++.+++.++ ..+|++++.+++..+.+++ .|...-+.....+ ..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence 446667788999998743 555556666553 3489999999988777754 4553222222222 444444432
Q ss_pred ---CCCccEEEEccC---ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336 256 ---NGGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 256 ---~~~~d~vid~~g---~~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
.+.||.||--.. -...++.+.+.|+++ |.++.-+.
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn~ 179 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDNT 179 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEcC
Confidence 237999886543 235678899999997 98876543
No 276
>PRK07574 formate dehydrogenase; Provisional
Probab=95.81 E-value=0.05 Score=51.50 Aligned_cols=90 Identities=17% Similarity=0.194 Sum_probs=59.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.+++|.|+|.|.+|...++.++.+|. +|++.+++....+..+++++... .+ +. ++.. ..|+|+.+..
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~---~~----l~----ell~-~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH---VS----FD----SLVS-VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec---CC----HH----HHhh-cCCEEEEcCC
Confidence 57899999999999999999999999 89999887644444445554311 11 22 2221 4688877766
Q ss_pred ChHh----H-HHHHHHhhcCCcEEEEEcC
Q 017336 268 NIDN----M-ISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 268 ~~~~----~-~~~~~~l~~~~g~~v~~g~ 291 (373)
..+. + ...+..|+++ ..+|.++.
T Consensus 258 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 285 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRG-SYLVNTAR 285 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCC-cEEEECCC
Confidence 3321 1 2556777775 66666654
No 277
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.80 E-value=0.057 Score=47.99 Aligned_cols=78 Identities=22% Similarity=0.302 Sum_probs=50.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHH---HHHHHcC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQE---VIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~---~~~~~~~ 256 (373)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+... . .|..+.+ .+.+ .+.+..
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~- 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDA-EVKALVEQTIAAY- 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHh-
Confidence 4689999998 8999999988888898 799998887664433 3334322 1 2222211 1222 222222
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|++|++.|.
T Consensus 83 g~id~li~~ag~ 94 (253)
T PRK06172 83 GRLDYAFNNAGI 94 (253)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 278
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.80 E-value=0.06 Score=48.59 Aligned_cols=79 Identities=14% Similarity=0.194 Sum_probs=48.7
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee--ecCCCCC--ccHHHHHHHHcC
Q 017336 188 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF--VNTSEHD--RPIQEVIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~g---~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v--i~~~~~~--~~~~~~~~~~~~ 256 (373)
.++++||+|++ ++|.++++.+...|+ +|+.+.++++..+.+ +++|.... .|..+.+ ..+.+.+.+..
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~- 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW- 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh-
Confidence 46899999984 899999999989999 788887765332222 33453322 2322211 11222232222
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 379999999873
No 279
>PRK08589 short chain dehydrogenase; Validated
Probab=95.79 E-value=0.056 Score=48.74 Aligned_cols=79 Identities=24% Similarity=0.283 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce---eecCCCCC--ccHHHHHHHHcCCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHD--RPIQEVIAEMTNGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~---lg~~~---vi~~~~~~--~~~~~~~~~~~~~~ 258 (373)
.++++||+|+ +++|.+.++.+...|+ +|++++++++..+.+++ .+... ..|..+.. ..+.+.+.+.. ++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence 4689999988 8999999988888899 89888888433333333 23221 13332221 01222222222 37
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998874
No 280
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.79 E-value=0.027 Score=54.94 Aligned_cols=95 Identities=11% Similarity=0.123 Sum_probs=62.3
Q ss_pred hhccCCCCCCEEE----EECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHH
Q 017336 181 LNVAKPERGSSVA----VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEM 254 (373)
Q Consensus 181 ~~~~~~~~~~~vl----I~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~ 254 (373)
..+.++++++.+| |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+... ++|..... +.+.+...
T Consensus 26 ~~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~l~~~ 102 (450)
T PRK08261 26 VPLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGIT--DPADLKAL 102 (450)
T ss_pred ccccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCC--CHHHHHHH
Confidence 3567778888888 8765 9999999999999999 8888866655443333344442 44443322 33333222
Q ss_pred cCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 255 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 255 ~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
. .++...++.|.++ |+++.++...
T Consensus 103 ~--------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 103 Y--------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred H--------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 1 4556677778886 8888887654
No 281
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.78 E-value=0.086 Score=48.71 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=33.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH
Q 017336 190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA 229 (373)
Q Consensus 190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~ 229 (373)
++|.|+|+|.+|...++.+...|+ .|+..+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 689999999999999999889999 899999988765543
No 282
>PRK04457 spermidine synthase; Provisional
Probab=95.77 E-value=0.13 Score=46.13 Aligned_cols=97 Identities=19% Similarity=0.151 Sum_probs=65.5
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CC----ceeecCCCCCccHHHHHHHHcCCCccE
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV----TDFVNTSEHDRPIQEVIAEMTNGGVDR 261 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~----~~vi~~~~~~~~~~~~~~~~~~~~~d~ 261 (373)
.++++||++|+|+ |..+..+++.....++++++.+++-.+.+++. +. +.+- ....+ ..+.+.+. .+.+|+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~-v~~~D--a~~~l~~~-~~~yD~ 139 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFE-VIEAD--GAEYIAVH-RHSTDV 139 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceE-EEECC--HHHHHHhC-CCCCCE
Confidence 4567899999876 77788888877544899999999999988773 32 1111 11112 44444432 347999
Q ss_pred EE-EccCC---------hHhHHHHHHHhhcCCcEEEEE
Q 017336 262 SV-ECTGN---------IDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 262 vi-d~~g~---------~~~~~~~~~~l~~~~g~~v~~ 289 (373)
|+ |...+ .++++.+.+.|+++ |+++.-
T Consensus 140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 87 33211 47888999999997 998763
No 283
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.76 E-value=0.14 Score=44.98 Aligned_cols=106 Identities=20% Similarity=0.274 Sum_probs=73.4
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCC
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 257 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~ 257 (373)
......+|.+||=+|+|. |-.++.+++..|-..|++++.++..++.+++ .|... +.+-..+ . +.+ .+...
T Consensus 45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d--A-e~L-Pf~D~ 118 (238)
T COG2226 45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD--A-ENL-PFPDN 118 (238)
T ss_pred HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec--h-hhC-CCCCC
Confidence 334556899999887765 8889999999986699999999998888765 23221 1111111 0 001 02222
Q ss_pred CccEEEEccCCh------HhHHHHHHHhhcCCcEEEEEcCCCC
Q 017336 258 GVDRSVECTGNI------DNMISAFECVHDGWGVAVLVGVPSK 294 (373)
Q Consensus 258 ~~d~vid~~g~~------~~~~~~~~~l~~~~g~~v~~g~~~~ 294 (373)
-||+|..+.|-. ..+.++.+.|+|+ |+++.+.....
T Consensus 119 sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 119 SFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred ccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 799998887743 5788999999997 99998877653
No 284
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.75 E-value=0.077 Score=47.31 Aligned_cols=78 Identities=26% Similarity=0.292 Sum_probs=50.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee-e--cCCCCCccHHHHHH---HHcC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-V--NTSEHDRPIQEVIA---EMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v-i--~~~~~~~~~~~~~~---~~~~ 256 (373)
+++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+.... + |..+.+ .+.+.+. +..
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~- 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNED-AVNAGIDKVAERF- 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHH-HHHHHHHHHHHHc-
Confidence 3689999998 9999999999999999 788888887554433 33444321 2 222211 1222222 222
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
++.|++|.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 368999999874
No 285
>PRK08264 short chain dehydrogenase; Validated
Probab=95.75 E-value=0.056 Score=47.47 Aligned_cols=75 Identities=19% Similarity=0.318 Sum_probs=48.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--ee-ecCCCCCccHHHHHHHHcCCCccEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DF-VNTSEHDRPIQEVIAEMTNGGVDRSV 263 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~--~v-i~~~~~~~~~~~~~~~~~~~~~d~vi 263 (373)
.++++||+|+ |.+|..+++.+...|+++|+.++++.++.+. .+.. .+ .|..+.+ .+.+.+.. . +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~-~~~~~~~~-~-~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPA-SVAAAAEA-A-SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHH-HHHHHHHh-c-CCCCEEE
Confidence 4678999987 9999999999999998678888888766543 2222 11 2222211 12222222 1 2589999
Q ss_pred EccCC
Q 017336 264 ECTGN 268 (373)
Q Consensus 264 d~~g~ 268 (373)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 99876
No 286
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.75 E-value=0.079 Score=47.36 Aligned_cols=79 Identities=19% Similarity=0.205 Sum_probs=47.9
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCceee--cCCCCC--ccHHHHHHHHcC
Q 017336 188 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFV--NTSEHD--RPIQEVIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~g---~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~vi--~~~~~~--~~~~~~~~~~~~ 256 (373)
.++++||+|++ ++|.++++.+...|+ +|+.++++++..+.+ ++++....+ |..+.. ..+.+.+.+..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~- 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW- 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-
Confidence 46899999863 899999988888999 788887775432222 333332222 222211 11222333322
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|+++++.|.
T Consensus 87 g~ld~lv~nAg~ 98 (258)
T PRK07533 87 GRLDFLLHSIAF 98 (258)
T ss_pred CCCCEEEEcCcc
Confidence 479999998863
No 287
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.071 Score=49.25 Aligned_cols=40 Identities=30% Similarity=0.339 Sum_probs=33.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~ 228 (373)
.+++++|+|+ +++|.+++..+...|+ +|+.+.++.++.+.
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~ 53 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEA 53 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 3689999998 8999999998888999 88888888766543
No 288
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.73 E-value=0.066 Score=47.66 Aligned_cols=79 Identities=29% Similarity=0.431 Sum_probs=50.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.|... . .|..+.. .+.+.+.+.. -+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD-AVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence 4689999987 8999999998888899 799998887655432 2233322 1 2332211 1222222221 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 289
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.73 E-value=0.08 Score=46.50 Aligned_cols=78 Identities=22% Similarity=0.286 Sum_probs=50.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCCccHHHHHHHHc--CCC
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~~~~~~~~~~~~--~~~ 258 (373)
+++|||+|+ |.+|...+..+...|. +|+++.+++++.+.+ ++.+.... .|..+.. .+.+.+.+.. -++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEA-AVRALIEAAVEAFGA 82 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHhCC
Confidence 578999998 8999999999888899 699998887764433 33443322 2332211 1323333221 136
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|+++.+.|.
T Consensus 83 id~vi~~ag~ 92 (246)
T PRK05653 83 LDILVNNAGI 92 (246)
T ss_pred CCEEEECCCc
Confidence 8999999864
No 290
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.12 Score=45.20 Aligned_cols=79 Identities=14% Similarity=0.170 Sum_probs=50.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCcee---ecCCCCC--ccHHHHHHHHcCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHD--RPIQEVIAEMTNG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~v---i~~~~~~--~~~~~~~~~~~~~ 257 (373)
.++++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+ ++.+.+.. .|..+.+ ..+.+.+.+..++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999998 7999998888888999 788888888765543 23344321 2222211 1122223232332
Q ss_pred CccEEEEccC
Q 017336 258 GVDRSVECTG 267 (373)
Q Consensus 258 ~~d~vid~~g 267 (373)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6999999986
No 291
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.71 E-value=0.14 Score=46.30 Aligned_cols=101 Identities=17% Similarity=0.141 Sum_probs=66.8
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-CCcee-ec-CCCC--CccHHHHHHHHcCCCc
Q 017336 185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDF-VN-TSEH--DRPIQEVIAEMTNGGV 259 (373)
Q Consensus 185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-g~~~v-i~-~~~~--~~~~~~~~~~~~~~~~ 259 (373)
...+ ++|||+|.|. |-.+-.+++.....++++++.+++=.++++++ +.... .+ ..-. -.+-.+.+++... +|
T Consensus 74 h~~p-k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~f 150 (282)
T COG0421 74 HPNP-KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KF 150 (282)
T ss_pred CCCC-CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cC
Confidence 3444 6999998765 44566777877777999999999999998874 22110 11 0000 0114445555443 79
Q ss_pred cEEEE-ccCC---------hHhHHHHHHHhhcCCcEEEEE
Q 017336 260 DRSVE-CTGN---------IDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 260 d~vid-~~g~---------~~~~~~~~~~l~~~~g~~v~~ 289 (373)
|+||- +... .++++.+.++|+++ |.++.-
T Consensus 151 DvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q 189 (282)
T COG0421 151 DVIIVDSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ 189 (282)
T ss_pred CEEEEcCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence 99764 4332 47899999999997 998876
No 292
>PRK08643 acetoin reductase; Validated
Probab=95.70 E-value=0.065 Score=47.70 Aligned_cols=78 Identities=19% Similarity=0.243 Sum_probs=49.5
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 258 (373)
++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.+ .+... . .|..+.+ ...+.+.+.. -++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 578999987 8999999999999999 89999888766544322 23222 1 2222221 1222222221 137
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999999864
No 293
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.70 E-value=0.16 Score=44.10 Aligned_cols=102 Identities=18% Similarity=0.247 Sum_probs=62.7
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh--------h-----------HHHHH----HhcCCce-eecCCCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS--------K-----------RFEEA----KKFGVTD-FVNTSEH 243 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~--------~-----------~~~~~----~~lg~~~-vi~~~~~ 243 (373)
+..+|+|+|.|++|..++..+-+.|..++..++-++ + |.+.+ ++.+..- |...+..
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 347899999999999999999999999888886543 1 11111 2222211 1111111
Q ss_pred CccHHHHHHHHcCCCccEEEEccCChHh-HHHHHHHhhcCCcEEEEEcCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGNIDN-MISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~~g~~v~~g~~ 292 (373)
- ..+.+.++...++|+|+||..+-.. ...+..|.+.+ =.++..+..
T Consensus 109 ~--t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Ga 155 (263)
T COG1179 109 I--TEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGA 155 (263)
T ss_pred h--CHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccc
Confidence 0 2234666666699999999876433 33444566665 566665544
No 294
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.70 E-value=0.13 Score=45.14 Aligned_cols=34 Identities=38% Similarity=0.502 Sum_probs=30.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
..+|+|+|+|++|..++..+-+.|..+++.++.+
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999999999999999998765
No 295
>CHL00194 ycf39 Ycf39; Provisional
Probab=95.69 E-value=0.073 Score=49.24 Aligned_cols=95 Identities=16% Similarity=0.203 Sum_probs=60.9
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee-cCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336 191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTGN 268 (373)
Q Consensus 191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi-~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 268 (373)
+|||+|+ |-+|...+..+...|. +|.+++++.++...+...+++.+. |..+. +.+.+... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~-----~~l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSLP-----ETLPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCCH-----HHHHHHHC-CCCEEEECCCC
Confidence 6999997 9999999999988898 899998887766555555665432 22221 22333333 68999998763
Q ss_pred hH------------hHHHHHHHhhcC-CcEEEEEcCC
Q 017336 269 ID------------NMISAFECVHDG-WGVAVLVGVP 292 (373)
Q Consensus 269 ~~------------~~~~~~~~l~~~-~g~~v~~g~~ 292 (373)
.. .....++.++.. -.+++.++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 21 112334444443 1378887764
No 296
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.69 E-value=0.064 Score=48.38 Aligned_cols=80 Identities=29% Similarity=0.323 Sum_probs=53.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc------eeecCCCCC--ccHHHHHHHH
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT------DFVNTSEHD--RPIQEVIAEM 254 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~------~vi~~~~~~--~~~~~~~~~~ 254 (373)
.++.+||+|+ .++|.+++..+...|+ +|+.+++++++.+.... .+.. .+.|....+ ....+...+.
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 5788999987 7999999999999999 89999999887655432 2222 122332221 1123333334
Q ss_pred cCCCccEEEEccCC
Q 017336 255 TNGGVDRSVECTGN 268 (373)
Q Consensus 255 ~~~~~d~vid~~g~ 268 (373)
..|+.|++++..|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 34589999998774
No 297
>PRK06484 short chain dehydrogenase; Validated
Probab=95.68 E-value=0.17 Score=50.24 Aligned_cols=104 Identities=23% Similarity=0.357 Sum_probs=66.9
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCcee---ecCCCCCccHHHHHHHHcC--CCc
Q 017336 187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF---VNTSEHDRPIQEVIAEMTN--GGV 259 (373)
Q Consensus 187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~v---i~~~~~~~~~~~~~~~~~~--~~~ 259 (373)
..++++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.... .|..+.+ ...+.+.+... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence 35789999987 8999999999999999 89999998877666544 444321 2332221 12222222211 379
Q ss_pred cEEEEccCChH--------------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336 260 DRSVECTGNID--------------------------NMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 260 d~vid~~g~~~--------------------------~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
|++|++.|... ..+.++..+..+ |+++.++...
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~ 403 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIA 403 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchh
Confidence 99999887410 133444556554 8999887653
No 298
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.66 E-value=0.08 Score=47.80 Aligned_cols=93 Identities=19% Similarity=0.171 Sum_probs=58.0
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC---ceeecCCCCCccHHHHHHHHcCCCccE
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDR 261 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~---~~vi~~~~~~~~~~~~~~~~~~~~~d~ 261 (373)
...+++++|+|+|++|.+++..+...|+ +|++++++.++.+.+ ++++. ..... +. +.....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~----~~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MD----ELPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hh----hhcccCccE
Confidence 3457899999999999999988888898 899998987775544 33321 11111 11 111126899
Q ss_pred EEEccCChHh--H---HHHHHHhhcCCcEEEEEcC
Q 017336 262 SVECTGNIDN--M---ISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 262 vid~~g~~~~--~---~~~~~~l~~~~g~~v~~g~ 291 (373)
||+|++.... . ......++++ ..++.+..
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 9999876311 1 1123456664 55655543
No 299
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.66 E-value=0.085 Score=47.82 Aligned_cols=77 Identities=21% Similarity=0.223 Sum_probs=56.1
Q ss_pred CCCCCEEEEECCCH-HHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336 186 PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 264 (373)
Q Consensus 186 ~~~~~~vlI~G~g~-~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid 264 (373)
.-.|++|+|+|.|. +|...++++...|+ +|+++.+..+. +.+.+ ..+|+||+
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~-------------------------L~~~~-~~aDIvI~ 208 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN-------------------------LPELV-KQADIIVG 208 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh-------------------------HHHHh-ccCCEEEE
Confidence 35788999999976 99999999999999 88888542111 11111 26899999
Q ss_pred ccCChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336 265 CTGNIDNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
++|.+..+. .+.++++ ..++.+|..
T Consensus 209 AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 209 AVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 998766443 3568886 888877754
No 300
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.66 E-value=0.1 Score=45.23 Aligned_cols=35 Identities=23% Similarity=0.308 Sum_probs=31.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
...+|+|+|+|++|..+++.+.+.|..+++.++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34689999999999999999999999889999876
No 301
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.65 E-value=0.066 Score=47.43 Aligned_cols=79 Identities=22% Similarity=0.291 Sum_probs=49.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c--CCce-ee--cCCCCCccHHHHHHHHc--CCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVTD-FV--NTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l--g~~~-vi--~~~~~~~~~~~~~~~~~--~~~ 258 (373)
+++++||+|+ |.+|...++.+...|+ +|+.+.++.++.+...+ + +... ++ |..+.. .+.+.+.+.. .++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAE-AVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence 4679999987 8999999998888898 79998888765443322 2 3221 22 222211 1222222221 137
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 302
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.096 Score=45.74 Aligned_cols=74 Identities=23% Similarity=0.294 Sum_probs=48.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCcee-ecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~v-i~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
+++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+.+ .+.+.+++. .+++|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~-~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDPA-SLEEARGLF-PHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCHH-HHHHHHHHH-hhcCcEEEECCC
Confidence 5899987 8999999999888899 888888888776544 44454332 2332221 122223222 236899999865
No 303
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.64 E-value=0.22 Score=38.35 Aligned_cols=92 Identities=22% Similarity=0.279 Sum_probs=61.5
Q ss_pred EEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChHh
Q 017336 192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN 271 (373)
Q Consensus 192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~ 271 (373)
|+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|... +.-+..+ .+.+++..-..++.++-+.+....
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~-i~gd~~~---~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEV-IYGDATD---PEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEE-EES-TTS---HHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccc-ccccchh---hhHHhhcCccccCEEEEccCCHHH
Confidence 6788999999999999999765 8999999999999999988653 3333222 123444432378999988887432
Q ss_pred ---HHHHHHHhhcCCcEEEEE
Q 017336 272 ---MISAFECVHDGWGVAVLV 289 (373)
Q Consensus 272 ---~~~~~~~l~~~~g~~v~~ 289 (373)
.....+.+.+. .+++..
T Consensus 76 n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHCCC-CeEEEE
Confidence 22334444554 555543
No 304
>PRK06194 hypothetical protein; Provisional
Probab=95.63 E-value=0.068 Score=48.51 Aligned_cols=79 Identities=19% Similarity=0.262 Sum_probs=49.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc---CCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---GVTD-FV--NTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l---g~~~-vi--~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+ .++ +... ++ |..+. ..+.+.+.... .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA-AQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHcC
Confidence 3578999987 8999999998888999 899898876654433 222 3322 12 22221 11222222211 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999999875
No 305
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.26 Score=43.39 Aligned_cols=101 Identities=16% Similarity=0.179 Sum_probs=58.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHH----HHHhcCCce-e--ecCCCCCccHHHHHH---HHc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTD-F--VNTSEHDRPIQEVIA---EMT 255 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~----~~~~lg~~~-v--i~~~~~~~~~~~~~~---~~~ 255 (373)
+++++||+|+ |.+|...+..+...|+ +|+.+.++. ++.+ .+++.+... . .|..+.+ .+.+.+. +..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAA-AVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHc
Confidence 4688999987 8999999999999999 666665543 2222 223334321 1 2222211 1222222 222
Q ss_pred CCCccEEEEccCChH-------------------------hHHHHHHHhhcCCcEEEEEcCC
Q 017336 256 NGGVDRSVECTGNID-------------------------NMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 256 ~~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
+++|++|.+.|... ....+++.+..+ |+++.++..
T Consensus 82 -~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 141 (245)
T PRK12937 82 -GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS 141 (245)
T ss_pred -CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence 37899999887410 123344555565 888888764
No 306
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.61 E-value=0.081 Score=47.20 Aligned_cols=78 Identities=29% Similarity=0.422 Sum_probs=50.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHH---HHHHHcC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQE---VIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~---~~~~~~~ 256 (373)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+... . .|..+.+ .+.+ .+.+..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~-~i~~~~~~~~~~~- 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEA-DIERLAEETLERF- 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHh-
Confidence 4689999987 9999999999988999 8999988877655443 223221 1 2332221 1222 222222
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|++|.+.|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 368999999874
No 307
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.60 E-value=0.078 Score=47.23 Aligned_cols=79 Identities=16% Similarity=0.287 Sum_probs=49.3
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--e--ecCCCCC--ccHHHHHHHHcCCC
Q 017336 188 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHD--RPIQEVIAEMTNGG 258 (373)
Q Consensus 188 ~~~~vlI~G~g---~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--v--i~~~~~~--~~~~~~~~~~~~~~ 258 (373)
.++++||+|++ ++|.++++.+...|+ +|+.+.++++..+.++++.... . .|..+.. ..+.+.+.+.. +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERV-GK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence 47899999874 899999998888999 7888877754444444442211 1 2322211 11222333322 37
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|+++++.|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999998873
No 308
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.59 E-value=0.04 Score=45.77 Aligned_cols=93 Identities=17% Similarity=0.298 Sum_probs=60.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--eeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~--~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.|.|+|+ |-+|...++=|+..|. .|+++.++++|....+...+- -+++.. + +.+.. .++|+||++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~-------~-~a~~l-~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLT-------S-LASDL-AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChh-------h-hHhhh-cCCceEEEecc
Confidence 5788988 9999999999999998 899999999886544222110 011111 1 11111 27999999988
Q ss_pred Ch---------HhHHHHHHHhhc-CCcEEEEEcCCC
Q 017336 268 NI---------DNMISAFECVHD-GWGVAVLVGVPS 293 (373)
Q Consensus 268 ~~---------~~~~~~~~~l~~-~~g~~v~~g~~~ 293 (373)
.. ...+..+..|+. +..|+..+|..+
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 64 123346666666 335788887643
No 309
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.59 E-value=0.093 Score=48.96 Aligned_cols=34 Identities=38% Similarity=0.485 Sum_probs=31.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
..+|+|+|+|++|..+++.+...|..++..++.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4789999999999999999999999999999875
No 310
>PLN02253 xanthoxin dehydrogenase
Probab=95.58 E-value=0.071 Score=48.19 Aligned_cols=78 Identities=19% Similarity=0.212 Sum_probs=49.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC--c-ee--ecCCCCCccHHHH---HHHHcCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--T-DF--VNTSEHDRPIQEV---IAEMTNG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~--~-~v--i~~~~~~~~~~~~---~~~~~~~ 257 (373)
.++++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+ ++++. . .. .|..+.+ .+.+. +.+.. +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~-g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKF-G 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHh-C
Confidence 3688999987 8999999988888899 888888876554433 33322 1 11 2332221 12222 22222 3
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 311
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.58 E-value=0.12 Score=44.18 Aligned_cols=76 Identities=29% Similarity=0.285 Sum_probs=49.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCcee-ecCCCCCccHHHHHHHHcCCCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF-VNTSEHDRPIQEVIAEMTNGGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g~~~v-i~~~~~~~~~~~~~~~~~~~~~d 260 (373)
++++++|+|+ |.+|..++..+...|+ +|+.++++.++.+.+.+ + +.... .+..+ . +.+.+... +.|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~----~-~~~~~~~~-~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD----D-AARAAAIK-GAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC----H-HHHHHHHh-cCC
Confidence 5689999997 9999998888888887 89988888877655433 2 33211 11111 1 11222222 689
Q ss_pred EEEEccCChH
Q 017336 261 RSVECTGNID 270 (373)
Q Consensus 261 ~vid~~g~~~ 270 (373)
+||.++..+.
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999987644
No 312
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.58 E-value=0.08 Score=49.08 Aligned_cols=78 Identities=22% Similarity=0.345 Sum_probs=49.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCC---c-ee--ecCCCCCccHHHHHHHH--cCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---T-DF--VNTSEHDRPIQEVIAEM--TNG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~---~-~v--i~~~~~~~~~~~~~~~~--~~~ 257 (373)
+++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ +++.. . .+ .|..+.+ .+.+.+.+. ..+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLD-SVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence 4688999987 8999999998888898 899998887765443 33321 1 11 2322211 122222221 123
Q ss_pred CccEEEEccC
Q 017336 258 GVDRSVECTG 267 (373)
Q Consensus 258 ~~d~vid~~g 267 (373)
++|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999987
No 313
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.58 E-value=0.11 Score=47.30 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=31.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 223 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~ 223 (373)
.+++++|+|+|++|.+++..+...|+++|+++.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 578999999999999988888899997799998885
No 314
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.58 E-value=0.067 Score=47.73 Aligned_cols=78 Identities=28% Similarity=0.302 Sum_probs=49.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce---eecCCCCCccHHHHHHHHc--CCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~---lg~~~---vi~~~~~~~~~~~~~~~~~--~~~ 258 (373)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++...+..++ .+.+. ..|..+.+ ...+.+.+.. .++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence 4688999987 8999999999988999 78888887543333333 34332 12333221 1222233221 137
Q ss_pred ccEEEEccC
Q 017336 259 VDRSVECTG 267 (373)
Q Consensus 259 ~d~vid~~g 267 (373)
+|+++++.|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999987
No 315
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.08 Score=47.82 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=49.1
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCC--c-ee--ecCCCCCccHHHHHHHHc--C
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--T-DF--VNTSEHDRPIQEVIAEMT--N 256 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~--~-~v--i~~~~~~~~~~~~~~~~~--~ 256 (373)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+. . .+ .|..+. ..+.+ +.+.. -
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ-NSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH-HHHHH-HHHHHHhc
Confidence 578999997 8999999998888899 78888887766544422 222 1 11 233221 11222 33322 1
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 378999999874
No 316
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.09 Score=46.85 Aligned_cols=80 Identities=24% Similarity=0.302 Sum_probs=50.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH----HHHhcCCce---eecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE----EAKKFGVTD---FVNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~----~~~~lg~~~---vi~~~~~~~~~~~~~~~~~--~~ 257 (373)
.+++++|+|+ |.+|..+++.+...|++.|++++++.++.+ .+++.+... ..|..+.+ .+.+.+.... -+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence 4688999998 899999999999999944999988765544 223344332 12332221 1222222211 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 317
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.034 Score=50.00 Aligned_cols=76 Identities=26% Similarity=0.392 Sum_probs=49.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee-ecCCCCCccHHHHHHHHc--CCCccEEEE
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSVE 264 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~~~~~~--~~~~d~vid 264 (373)
+++++|+|+ |.+|...++.+...|+ +|++++++.++.+.. .+...+ .|..+.+ .+.+.+.... .+.+|++|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~-~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTDDA-SVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCCHH-HHHHHHHHHHHhCCCCCEEEE
Confidence 568999987 8999999988888899 799998876654322 122222 2332221 2333333322 136899999
Q ss_pred ccCC
Q 017336 265 CTGN 268 (373)
Q Consensus 265 ~~g~ 268 (373)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9884
No 318
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.57 E-value=0.1 Score=41.70 Aligned_cols=34 Identities=29% Similarity=0.443 Sum_probs=29.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
.++|+|+|+|++|..++..+-+.|..++..++.+
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4789999999999999999999999889988654
No 319
>PRK05717 oxidoreductase; Validated
Probab=95.57 E-value=0.084 Score=46.99 Aligned_cols=79 Identities=22% Similarity=0.294 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCCccHHHHHHHHcC--CCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~~~~~~--~~~d 260 (373)
.++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++... . .|..+.+ .+.+.+.+... +++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEA-QVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence 4688999987 8999999999888898 888888776554443 3444321 1 2222211 12222233221 3689
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 320
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.56 E-value=0.17 Score=43.88 Aligned_cols=102 Identities=22% Similarity=0.180 Sum_probs=62.1
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceeec-------CCCCCcc-HHHHHHHHc--
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEMT-- 255 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~vi~-------~~~~~~~-~~~~~~~~~-- 255 (373)
.++.+||+.|+|. |.-++-+|. .|. .|++++.++.-.+.+ ++.+...... +...+-. ....+.+..
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 5678999999876 677777764 699 899999999888875 3333321000 0000000 000011111
Q ss_pred -CCCccEEEEccCC--------hHhHHHHHHHhhcCCcEEEEEcCC
Q 017336 256 -NGGVDRSVECTGN--------IDNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 256 -~~~~d~vid~~g~--------~~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
.+.||.|+|+..- ...+....++|+|+ |++++....
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~ 154 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD 154 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence 1368999996531 24678999999997 987766553
No 321
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.078 Score=47.33 Aligned_cols=79 Identities=22% Similarity=0.240 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hc-----CCce-e--ecCCCCCccHHHHHHHHc--
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVTD-F--VNTSEHDRPIQEVIAEMT-- 255 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~l-----g~~~-v--i~~~~~~~~~~~~~~~~~-- 255 (373)
.++++||+|+ |++|..++..+...|+ +|+.+++++++.+.+. ++ +... + .|..+.. .+.+.+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAA-SVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHH-HHHHHHHHHHHH
Confidence 4689999987 8999999999999999 7888888876655432 22 2221 1 2322211 1222222221
Q ss_pred CCCccEEEEccCC
Q 017336 256 NGGVDRSVECTGN 268 (373)
Q Consensus 256 ~~~~d~vid~~g~ 268 (373)
-+++|++|++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 1379999999873
No 322
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.082 Score=46.90 Aligned_cols=78 Identities=22% Similarity=0.261 Sum_probs=49.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-ee--cCCCCCccHHHHHHHHcC--C
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--G 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-vi--~~~~~~~~~~~~~~~~~~--~ 257 (373)
.++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ .+... .+ |..+.. ...+.+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEME-QIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcC
Confidence 3578999987 8999999999999999 89999888765544322 23221 22 222211 12222222211 3
Q ss_pred CccEEEEccC
Q 017336 258 GVDRSVECTG 267 (373)
Q Consensus 258 ~~d~vid~~g 267 (373)
.+|+++++.|
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 323
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.083 Score=47.20 Aligned_cols=79 Identities=20% Similarity=0.220 Sum_probs=49.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh---cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~---lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 258 (373)
.++++||+|+ |.+|...+..+...|+ +|+.++++++..+.+++ .+... . .|..+.. ++.+.+.+.. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPA-SVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence 4689999987 8999999999988999 79999887654443333 23321 1 2222211 1222222211 136
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 324
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.55 E-value=0.12 Score=45.85 Aligned_cols=35 Identities=31% Similarity=0.443 Sum_probs=30.9
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 223 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~ 223 (373)
+.+|+|+|+|++|..+++.+.+.|.++++.++.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999999998887643
No 325
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.093 Score=46.72 Aligned_cols=78 Identities=22% Similarity=0.337 Sum_probs=48.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcC---Cce-eecCCCCCccHHHHHHHHc--CCCcc
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG---VTD-FVNTSEHDRPIQEVIAEMT--NGGVD 260 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg---~~~-vi~~~~~~~~~~~~~~~~~--~~~~d 260 (373)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+. ++. +.. ..|..+.+ .+.+.+.+.. -+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAA-SLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCC
Confidence 568999998 8999999988888898 7999988877655443 232 111 12222211 1222222221 13689
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 326
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.54 E-value=0.16 Score=40.96 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=28.8
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
+|+|+|+|++|...+..+.+.|.+++..++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999889988765
No 327
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.084 Score=47.18 Aligned_cols=78 Identities=26% Similarity=0.372 Sum_probs=48.9
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHcC--CC
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GG 258 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~~--~~ 258 (373)
++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..+... ++ |..+. ..+.+.+.+... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDA-EACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH-HHHHHHHHHHHHHcCC
Confidence 367999988 8999999999989998 899998887654433 2233322 11 22221 112222322211 36
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 328
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.16 Score=44.09 Aligned_cols=74 Identities=19% Similarity=0.196 Sum_probs=46.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCC--CccEEEEc
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVEC 265 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~--~~d~vid~ 265 (373)
+++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ +..-.++..+-.+ .+.+.+...+ +.|++|.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~---~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD---PEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC---HHHHHHHHHhcCCCCEEEEC
Confidence 68999987 89999888777666 6 79999888776555443 2111222111111 1223333322 69999999
Q ss_pred cCC
Q 017336 266 TGN 268 (373)
Q Consensus 266 ~g~ 268 (373)
.|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 874
No 329
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.065 Score=47.63 Aligned_cols=77 Identities=19% Similarity=0.258 Sum_probs=47.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV 263 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~--~~~~d~vi 263 (373)
.++++||+|+ |.+|...++.+...|+ +|+.++++.++. .....+.. ..|..+.. .+.+.+.... -+++|++|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~vi 80 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRDPD-QVAALVDAIVERHGRLDVLV 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 4789999987 8999999999988999 888888876551 11111211 12322211 1222222221 13689999
Q ss_pred EccCC
Q 017336 264 ECTGN 268 (373)
Q Consensus 264 d~~g~ 268 (373)
.+.|.
T Consensus 81 ~~ag~ 85 (252)
T PRK07856 81 NNAGG 85 (252)
T ss_pred ECCCC
Confidence 98873
No 330
>PLN03139 formate dehydrogenase; Provisional
Probab=95.51 E-value=0.065 Score=50.76 Aligned_cols=90 Identities=19% Similarity=0.162 Sum_probs=59.5
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.|++|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+..+ . + +.+.+ . ..|+|+.++.
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~----~-~--l~ell----~-~sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE----E-D--LDAML----P-KCDVVVINTP 264 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec----C-C--HHHHH----h-hCCEEEEeCC
Confidence 57899999999999999999999999 89999877544444455554321 0 1 22222 1 3677777766
Q ss_pred ChH----hH-HHHHHHhhcCCcEEEEEcC
Q 017336 268 NID----NM-ISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 268 ~~~----~~-~~~~~~l~~~~g~~v~~g~ 291 (373)
..+ .+ ...+..|+++ ..+|.++-
T Consensus 265 lt~~T~~li~~~~l~~mk~g-a~lIN~aR 292 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKG-VLIVNNAR 292 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCC-eEEEECCC
Confidence 322 11 2566777775 66666654
No 331
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.15 Score=45.50 Aligned_cols=77 Identities=26% Similarity=0.371 Sum_probs=49.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----CCce-e--ecCCCCCccHHHHHHHHcCCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-F--VNTSEHDRPIQEVIAEMTNGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g~~~-v--i~~~~~~~~~~~~~~~~~~~~ 258 (373)
.++++||+|+ +++|...++.+...|+ +|++++++.++.+.+.+ + +... . .|..+.+ .+.+.+. .. ++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~-~~~~~~~-~~-g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPE-AREQLAA-EA-GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHH-Hh-CC
Confidence 3689999988 8999999999888999 89999888776554322 2 3221 2 2222211 1222222 22 47
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|++.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 332
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.1 Score=46.83 Aligned_cols=78 Identities=22% Similarity=0.324 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.. .+.+... . .|..+.+ .+.+.+.+.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYA-AVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence 5789999987 8999999999989999 799998887654433 2223221 1 2332211 1222233322 13
Q ss_pred CccEEEEccC
Q 017336 258 GVDRSVECTG 267 (373)
Q Consensus 258 ~~d~vid~~g 267 (373)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 6899998875
No 333
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.49 E-value=0.094 Score=46.69 Aligned_cols=78 Identities=24% Similarity=0.332 Sum_probs=50.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHHHHHHHHc--CCCccE
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDR 261 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d~ 261 (373)
++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+.+ ++... . .|..+.+ ...+.+.+.. .+++|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQD-SIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 678999987 8999999999999999 89999888877655433 33221 1 2222211 1222222211 136899
Q ss_pred EEEccCC
Q 017336 262 SVECTGN 268 (373)
Q Consensus 262 vid~~g~ 268 (373)
++.+.|.
T Consensus 84 li~~ag~ 90 (257)
T PRK07067 84 LFNNAAL 90 (257)
T ss_pred EEECCCc
Confidence 9998763
No 334
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.48 E-value=0.45 Score=36.76 Aligned_cols=87 Identities=23% Similarity=0.345 Sum_probs=59.4
Q ss_pred EEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHH-HHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 191 SVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
+|+|+|.|..|..-+.-++.. +.+-+.++++++++.+. .+++|.. .+. + +.+.+.. ..+|+|+.++.
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~~--~----~~~ll~~---~~~D~V~I~tp 71 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VYT--D----LEELLAD---EDVDAVIIATP 71 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EES--S----HHHHHHH---TTESEEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-chh--H----HHHHHHh---hcCCEEEEecC
Confidence 588999999998877666555 45234456677766665 4667877 332 1 3333332 27999999999
Q ss_pred ChHhHHHHHHHhhcCCcEEEEE
Q 017336 268 NIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 268 ~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
...+.+.+..++..+ .-+++
T Consensus 72 ~~~h~~~~~~~l~~g--~~v~~ 91 (120)
T PF01408_consen 72 PSSHAEIAKKALEAG--KHVLV 91 (120)
T ss_dssp GGGHHHHHHHHHHTT--SEEEE
T ss_pred CcchHHHHHHHHHcC--CEEEE
Confidence 988889999999984 45555
No 335
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.11 Score=46.05 Aligned_cols=73 Identities=22% Similarity=0.380 Sum_probs=46.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCcee--ecCCCCCccHHHHHHHHcCCCccEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDRSV 263 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~v--i~~~~~~~~~~~~~~~~~~~~~d~vi 263 (373)
.++++||+|+ |++|.+.++.+...|+ +|++++++. ++.+.... +.... .|..+ . +.+.+.. +++|++|
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~----~-~~~~~~~-~~iDilV 84 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK----E-ESLDKQL-ASLDVLI 84 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC----H-HHHHHhc-CCCCEEE
Confidence 3589999987 8999999999889999 888887765 22222111 11122 22222 1 2233333 3699999
Q ss_pred EccCC
Q 017336 264 ECTGN 268 (373)
Q Consensus 264 d~~g~ 268 (373)
++.|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99874
No 336
>PLN02476 O-methyltransferase
Probab=95.48 E-value=0.15 Score=45.98 Aligned_cols=107 Identities=21% Similarity=0.211 Sum_probs=69.6
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc-
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 255 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~- 255 (373)
.+.+..+.++||=+|.+. |..++.+|+.++ -.+|++++.+++..+.+++ .|...-+.....+ ..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence 345667789999998733 666667777653 2279999999988877754 5664322222222 444444432
Q ss_pred ---CCCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCC
Q 017336 256 ---NGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 256 ---~~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
.+.||.||--.... +.++.+++.|+++ |.++.=+..
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DNvL 230 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDNVL 230 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEecCc
Confidence 23799987665543 5678999999997 888765443
No 337
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.47 E-value=0.041 Score=50.10 Aligned_cols=96 Identities=23% Similarity=0.327 Sum_probs=57.5
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCc-eeecCCCCCccHHHHHHHHcCCCcc
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGGVD 260 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~-~vi~~~~~~~~~~~~~~~~~~~~~d 260 (373)
..++++||=+|+|. |.+++..++ +|+++|++++.++...+.+++ -|.. .+......+ ...++||
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~---------~~~~~~d 227 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED---------LVEGKFD 227 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC---------TCCS-EE
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc---------cccccCC
Confidence 56788999888743 444444333 598899999999877666654 1222 221111111 1124899
Q ss_pred EEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 261 RSVECTGNI---DNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 261 ~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+|+-..-.. .......+.|+++ |.+++-|...
T Consensus 228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 999765543 2344566778887 9999887764
No 338
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.45 E-value=0.24 Score=44.27 Aligned_cols=78 Identities=17% Similarity=0.359 Sum_probs=46.3
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCCh---hHHHHH-Hhc-CCce-e--ecCCCCCccHHHHHHHHcC
Q 017336 188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKF-GVTD-F--VNTSEHDRPIQEVIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~---~~~~~~-~~l-g~~~-v--i~~~~~~~~~~~~~~~~~~ 256 (373)
.++++||+|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ +++ +... . .|..+.+ ...+.+++...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDE-EITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHH-HHHHHHHHHHH
Confidence 4689999986 4999999888888999 788776543 333333 333 2211 1 2332221 12222322221
Q ss_pred --CCccEEEEccC
Q 017336 257 --GGVDRSVECTG 267 (373)
Q Consensus 257 --~~~d~vid~~g 267 (373)
+++|+++++.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999999876
No 339
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.1 Score=46.48 Aligned_cols=79 Identities=20% Similarity=0.255 Sum_probs=48.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-H-HHH---HHhcCCce-e--ecCCCCCccHHHHHHHHc--C
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-R-FEE---AKKFGVTD-F--VNTSEHDRPIQEVIAEMT--N 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-~-~~~---~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~ 256 (373)
.++++||+|+ +++|.++++.+...|+ +|++++++++ . .+. +++.+... . .|..+.+ .+.+.+.+.. -
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKA-DLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 4689999987 8999999999999999 7888877643 2 222 23334322 1 2222211 1323233221 1
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|++|++.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 378999999874
No 340
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.097 Score=47.16 Aligned_cols=78 Identities=22% Similarity=0.415 Sum_probs=49.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc---C--Cc-eee--cCCCCCccHHHHHHHHcC-
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF---G--VT-DFV--NTSEHDRPIQEVIAEMTN- 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l---g--~~-~vi--~~~~~~~~~~~~~~~~~~- 256 (373)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.. +++ + .. .++ |..+.+ .+.+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDED-QVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHH-HHHHHHHHHHHH
Confidence 3689999997 8999999999999999 899998887654432 222 1 11 122 322211 12223332221
Q ss_pred -CCccEEEEccC
Q 017336 257 -GGVDRSVECTG 267 (373)
Q Consensus 257 -~~~d~vid~~g 267 (373)
+++|++|.+.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 37899999887
No 341
>PRK08317 hypothetical protein; Provisional
Probab=95.43 E-value=0.083 Score=46.34 Aligned_cols=102 Identities=25% Similarity=0.389 Sum_probs=68.6
Q ss_pred hhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHhc--CC-ce--eecCCCCCccHHHHHHHH
Q 017336 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF--GV-TD--FVNTSEHDRPIQEVIAEM 254 (373)
Q Consensus 181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~l--g~-~~--vi~~~~~~~~~~~~~~~~ 254 (373)
.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++. .. .. ++..+... + ..
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~--~-----~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG--L-----PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc--C-----CC
Confidence 4567788999999999976 888888888773 23899999999888887664 11 11 11111110 0 11
Q ss_pred cCCCccEEEEcc-----C-ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336 255 TNGGVDRSVECT-----G-NIDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 255 ~~~~~d~vid~~-----g-~~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
..+.+|+|+... . ....+..+.++|+++ |.+++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 125 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT 125 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence 224789888642 1 225788999999997 99987653
No 342
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.09 Score=47.54 Aligned_cols=79 Identities=20% Similarity=0.247 Sum_probs=50.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++++||+|+ |++|.+.+..+...|+ +|+.++++.++.+.+ ++.+... . .|..+.+ .+.+.+.+.. -+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE-EVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHH-HHHHHHHHHHHHcC
Confidence 4688999987 8999999999989999 788888887665433 2234322 1 2222211 1222222211 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 83 ~id~li~nAg~ 93 (275)
T PRK05876 83 HVDVVFSNAGI 93 (275)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 343
>PRK09242 tropinone reductase; Provisional
Probab=95.41 E-value=0.1 Score=46.52 Aligned_cols=79 Identities=19% Similarity=0.263 Sum_probs=50.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c-----CCce-e--ecCCCCCccHHHHHHHHc--
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-F--VNTSEHDRPIQEVIAEMT-- 255 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l-----g~~~-v--i~~~~~~~~~~~~~~~~~-- 255 (373)
.++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ + +... . .|..+.+ .+.+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDE-DRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHH-HHHHHHHHHHHH
Confidence 4789999987 8999999999999999 79998888776554432 1 2221 1 2322211 1222222221
Q ss_pred CCCccEEEEccCC
Q 017336 256 NGGVDRSVECTGN 268 (373)
Q Consensus 256 ~~~~d~vid~~g~ 268 (373)
-+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 1379999999884
No 344
>PRK07985 oxidoreductase; Provisional
Probab=95.39 E-value=0.23 Score=45.43 Aligned_cols=103 Identities=17% Similarity=0.144 Sum_probs=60.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh--hHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT-- 255 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~--~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~-- 255 (373)
.++++||+|+ |++|.++++.+...|+ +|+.+.++. ++.+.+ ++.+... . .|..+.+ .+.+.+.+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEK-FARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHH-HHHHHHHHHHHH
Confidence 5679999997 8999999999999999 787775432 222222 2334322 1 2322211 1222222221
Q ss_pred CCCccEEEEccCCh--------------------------HhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 256 NGGVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 256 ~~~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
-+++|+++.+.|.. ..+..+...+..+ |+++.++...
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~ 188 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQ 188 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCch
Confidence 13789999987631 1223444555665 8898887643
No 345
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.37 E-value=0.068 Score=45.72 Aligned_cols=98 Identities=15% Similarity=0.132 Sum_probs=58.8
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHcCC
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG 257 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~~ 257 (373)
+.....++.+||-+|+|. |..++.+++ .|. .|++++.+++..+.+++. +... .....+ +.. . . ..+
T Consensus 24 ~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v--~~~~~d--~~~-~-~-~~~ 93 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPL--RTDAYD--INA-A-A-LNE 93 (195)
T ss_pred HHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCc--eeEecc--chh-c-c-ccC
Confidence 334444567899998864 666666665 477 899999998877766442 3321 111011 100 0 1 123
Q ss_pred CccEEEEccC-----C---hHhHHHHHHHhhcCCcEEEEEc
Q 017336 258 GVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 258 ~~d~vid~~g-----~---~~~~~~~~~~l~~~~g~~v~~g 290 (373)
.+|+|+...- . ...+..+.+.|+++ |.++.+.
T Consensus 94 ~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 94 DYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 6999986521 1 24677888999997 9855543
No 346
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.1 Score=47.87 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=32.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE 227 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~ 227 (373)
.+++|||+|+ |++|..+++.+...|+ +|+.+.++.++.+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~ 54 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGK 54 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 5689999987 8999999998888899 7888888876644
No 347
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.35 E-value=0.13 Score=45.78 Aligned_cols=35 Identities=34% Similarity=0.457 Sum_probs=30.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
...+|+|+|+|++|..++..+.+.|.+++..++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 34789999999999999999999999888888654
No 348
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.34 E-value=0.13 Score=45.82 Aligned_cols=79 Identities=22% Similarity=0.337 Sum_probs=50.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+.. .+.+.+.+.. -+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEE-AVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence 5789999987 8999999988888899 899998887654433 2334321 1 2322211 1222222221 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 349
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.33 E-value=0.013 Score=47.82 Aligned_cols=94 Identities=21% Similarity=0.229 Sum_probs=56.0
Q ss_pred EEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCC----CccHHHHHHHHcCCCccEEEEccC
Q 017336 192 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 192 vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~----~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
|+|+|+|++|.+.+..++..|. .|..+.+.+ +.+.+++-|........+. ....... ....+.+|+||-|+=
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888888998 899998877 7777776665321111000 0000000 112237999999986
Q ss_pred ChHhHHHHHHHhhc----CCcEEEEEcC
Q 017336 268 NIDNMISAFECVHD----GWGVAVLVGV 291 (373)
Q Consensus 268 ~~~~~~~~~~~l~~----~~g~~v~~g~ 291 (373)
+. ....+++.+++ + ..++.+..
T Consensus 77 a~-~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AY-QLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GG-GHHHHHHHHCTGEETT-EEEEEESS
T ss_pred cc-chHHHHHHHhhccCCC-cEEEEEeC
Confidence 63 33444444444 3 46666644
No 350
>PRK06398 aldose dehydrogenase; Validated
Probab=95.33 E-value=0.059 Score=48.20 Aligned_cols=74 Identities=20% Similarity=0.277 Sum_probs=47.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV 263 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~--~~~~d~vi 263 (373)
.++++||+|+ |++|.+.+..+...|+ +|+++++++++.. .... ..|..+.+ .+.+.+.+.. -+++|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 4689999997 8999999999999999 8988887765422 1111 12332221 1223333222 13699999
Q ss_pred EccCC
Q 017336 264 ECTGN 268 (373)
Q Consensus 264 d~~g~ 268 (373)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98873
No 351
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.32 E-value=0.11 Score=47.12 Aligned_cols=95 Identities=22% Similarity=0.240 Sum_probs=65.7
Q ss_pred hcccchhhhhhhhhhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCc
Q 017336 168 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 245 (373)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 245 (373)
.+||+....+. +++.-++ -.|++|.|+|. +.+|.-.+.++...|+ .|+++.+... +
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~-------------------~- 195 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST-------------------D- 195 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC-------------------C-
Confidence 34555444444 3333343 46999999998 5999999999999999 8888854321 1
Q ss_pred cHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 246 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 246 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
.. +.+. ..|+|+-++|.+..+...+ ++++ ..++.+|...
T Consensus 196 -l~----e~~~-~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin~ 234 (301)
T PRK14194 196 -AK----ALCR-QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGINR 234 (301)
T ss_pred -HH----HHHh-cCCEEEEecCChhcccHhh--ccCC-cEEEEecccc
Confidence 21 2221 4799999999987776554 8886 8888888643
No 352
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.31 E-value=0.13 Score=45.66 Aligned_cols=79 Identities=22% Similarity=0.356 Sum_probs=49.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCce-e--ecCCCCCccHHHHHHHHc--CCCc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV 259 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~ 259 (373)
.++++||+|+ +++|.++++.+...|+ +|+.+++++. ..+.+++.+.+. . .|..+.+ ++.+.+.+.. -+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence 4789999987 8999999999999999 7888876542 223344455432 1 2332221 1222232221 1379
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998873
No 353
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.16 Score=45.29 Aligned_cols=81 Identities=20% Similarity=0.254 Sum_probs=48.9
Q ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHc-CCcEEEEEcCChhH-HHH----HHhcCC-c-ee--ecCCCCCccHHHHHHHH
Q 017336 186 PERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKR-FEE----AKKFGV-T-DF--VNTSEHDRPIQEVIAEM 254 (373)
Q Consensus 186 ~~~~~~vlI~G~-g~~G~~ai~la~~~-g~~~V~~~~~~~~~-~~~----~~~lg~-~-~v--i~~~~~~~~~~~~~~~~ 254 (373)
+..+++|||+|+ |++|.+.++.+... |+ +|+.++++.++ .+. +++.+. . .+ .|..+.+ ...+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~-~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTD-SHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChH-HHHHHHHHH
Confidence 456789999998 89999988876666 57 88888887654 332 333332 1 12 2332221 122223332
Q ss_pred cC-CCccEEEEccCC
Q 017336 255 TN-GGVDRSVECTGN 268 (373)
Q Consensus 255 ~~-~~~d~vid~~g~ 268 (373)
.. ++.|+++.+.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479999987764
No 354
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.31 E-value=0.27 Score=41.62 Aligned_cols=99 Identities=17% Similarity=0.190 Sum_probs=62.9
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcCC
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG 257 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~~ 257 (373)
....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++...+-... .+ .. ....+
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~-~d--~~----~~~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP-GE--AP----IELPG 96 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe-cC--ch----hhcCc
Confidence 445667888988888865 6666677776543389999999987777653 4433221111 11 10 11123
Q ss_pred CccEEEEccC---ChHhHHHHHHHhhcCCcEEEEE
Q 017336 258 GVDRSVECTG---NIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 258 ~~d~vid~~g---~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
.+|+|+.... -...+..+.+.|+++ |+++..
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 7999986432 124677889999997 998764
No 355
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.12 Score=45.67 Aligned_cols=77 Identities=27% Similarity=0.447 Sum_probs=48.7
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----c--CCce-e--ecCCCCCccHHHHHHHHc--C
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTD-F--VNTSEHDRPIQEVIAEMT--N 256 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----l--g~~~-v--i~~~~~~~~~~~~~~~~~--~ 256 (373)
++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+ . +... + .|..+.. .+.+.+.+.. -
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHD-QVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 578999987 8999998888888898 88888888776554432 1 2211 1 2333221 2333333222 1
Q ss_pred CCccEEEEccC
Q 017336 257 GGVDRSVECTG 267 (373)
Q Consensus 257 ~~~d~vid~~g 267 (373)
++.|++|.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37999999886
No 356
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.29 E-value=0.11 Score=46.86 Aligned_cols=78 Identities=21% Similarity=0.313 Sum_probs=49.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.+++++|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+. +.+... . .|..+.. .+...+.+.. -+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKE-SLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcC
Confidence 4688999987 8999999999989999 7988888776544332 223321 1 2222211 1222222221 13
Q ss_pred CccEEEEccC
Q 017336 258 GVDRSVECTG 267 (373)
Q Consensus 258 ~~d~vid~~g 267 (373)
++|++|++.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999987
No 357
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.28 E-value=0.13 Score=45.75 Aligned_cols=79 Identities=24% Similarity=0.365 Sum_probs=49.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+ +..+... . .|..+.+ .+.+.+.+.. -+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQ-EVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHH-HHHHHHHHHHHhcC
Confidence 4688999987 8999999999988999 899998887664433 2223222 1 2222211 1222222211 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 69999999874
No 358
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.28 E-value=0.21 Score=43.26 Aligned_cols=100 Identities=22% Similarity=0.254 Sum_probs=62.8
Q ss_pred hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC
Q 017336 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN 256 (373)
Q Consensus 181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~ 256 (373)
.....++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++ ++...+- ....+ ..+.. ...
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~~~--~~~ 142 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVS-VRHGD--GWKGW--PAY 142 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceE-EEECC--cccCC--CcC
Confidence 4557788999999998864 44555556554 3 79999998877665543 4443221 11111 00000 011
Q ss_pred CCccEEEEccCChHhHHHHHHHhhcCCcEEEEE
Q 017336 257 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 257 ~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
+.||+|+.............+.|+++ |+++..
T Consensus 143 ~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 143 APFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred CCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 37999887665556677888999997 988764
No 359
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.27 E-value=0.16 Score=44.17 Aligned_cols=95 Identities=24% Similarity=0.276 Sum_probs=62.3
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--eecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE 264 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--vi~~~~~~~~~~~~~~~~~~~~~d~vid 264 (373)
-++.+||=+|+|+ |.++.-+| ++|+ .|++++-+++..+.++.-.... -++|... ..+.+... ++.||+|++
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~---~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQA---TVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchhh---hHHHHHhc-CCCccEEEE
Confidence 4788999999864 55555544 4578 8999999999998887432221 1445433 22333222 148999987
Q ss_pred -----ccCCh-HhHHHHHHHhhcCCcEEEEE
Q 017336 265 -----CTGNI-DNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 265 -----~~g~~-~~~~~~~~~l~~~~g~~v~~ 289 (373)
.+..+ .++..+.+.++|+ |.+++-
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 34444 3567899999997 877653
No 360
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.26 E-value=0.23 Score=43.63 Aligned_cols=34 Identities=35% Similarity=0.416 Sum_probs=30.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
..+|+|+|+|++|..++..+.+.|..+++.++.+
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 5789999999999999999999999888888543
No 361
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.25 E-value=0.18 Score=43.23 Aligned_cols=35 Identities=34% Similarity=0.467 Sum_probs=31.3
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
...+|+|+|+|++|..+++.+.+.|..+++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34789999999999999999999999889999877
No 362
>PRK09186 flagellin modification protein A; Provisional
Probab=95.25 E-value=0.12 Score=45.97 Aligned_cols=78 Identities=19% Similarity=0.437 Sum_probs=49.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-Hhc----CCce----eecCCCCCccHHHHHHHHcC-
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKF----GVTD----FVNTSEHDRPIQEVIAEMTN- 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~l----g~~~----vi~~~~~~~~~~~~~~~~~~- 256 (373)
.++++||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ +++ +... ..|..+.+ .+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence 4689999997 8999999999999999 788888887665433 222 2221 12333221 12232332211
Q ss_pred -CCccEEEEccC
Q 017336 257 -GGVDRSVECTG 267 (373)
Q Consensus 257 -~~~d~vid~~g 267 (373)
+++|++|++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999875
No 363
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.25 E-value=0.13 Score=45.30 Aligned_cols=79 Identities=22% Similarity=0.226 Sum_probs=48.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH----HHhcCCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~----~~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~~ 257 (373)
.+++|||+|+ |.+|...+..+...|+ +|++++++.++... +++.+... ++ |..+. ..+.+.+.+.. .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDR-AALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH-HHHHHHHHHHHHHhC
Confidence 4678999997 8999999988888898 89999888654332 22333221 22 22211 11222222221 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
.+|++|.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998764
No 364
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.24 E-value=0.13 Score=46.12 Aligned_cols=78 Identities=17% Similarity=0.245 Sum_probs=46.7
Q ss_pred CCCEEEEECC-C--HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCcee--ecCCCCCccHHHHHHHHcC--
Q 017336 188 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF--VNTSEHDRPIQEVIAEMTN-- 256 (373)
Q Consensus 188 ~~~~vlI~G~-g--~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~v--i~~~~~~~~~~~~~~~~~~-- 256 (373)
.++++||+|+ + ++|.++++.+...|+ +|+.+.++++..+.++ ++|.... .|..+.+ ...+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence 4688999987 4 799998888888899 7888777643222232 2343322 2333221 12222222221
Q ss_pred CCccEEEEccC
Q 017336 257 GGVDRSVECTG 267 (373)
Q Consensus 257 ~~~d~vid~~g 267 (373)
+++|+++++.|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 37999999876
No 365
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.24 E-value=0.12 Score=45.72 Aligned_cols=76 Identities=22% Similarity=0.346 Sum_probs=49.5
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCce-e--ecCCCCCccHHHHHHHHcC--CCccEEE
Q 017336 191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVDRSV 263 (373)
Q Consensus 191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~-v--i~~~~~~~~~~~~~~~~~~--~~~d~vi 263 (373)
+|+|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+.+ ++... . .|..+.+ .+.+.+.+... ++.|.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRA-AIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 6899987 8999999999988999 89999998877665543 34322 1 2322211 12232332211 3699999
Q ss_pred EccCC
Q 017336 264 ECTGN 268 (373)
Q Consensus 264 d~~g~ 268 (373)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
No 366
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.23 E-value=0.13 Score=45.21 Aligned_cols=79 Identities=23% Similarity=0.258 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce-e--ecCCCCCccHHHHHHHHc--CCCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d 260 (373)
+++++||+|+ |.+|..++..+...|+ .|+...++.++.+.+ ..++... + .|..+.+ .+.+.+.+.. -+++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRD-EVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHH-HHHHHHHHHHHHcCCCC
Confidence 4679999997 8999999999888998 788887776665544 3344321 2 2222211 1222222211 13799
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 367
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.22 E-value=0.16 Score=45.26 Aligned_cols=39 Identities=21% Similarity=0.248 Sum_probs=32.4
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~ 228 (373)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~ 41 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAAN 41 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHH
Confidence 578999987 8999999999888899 88888887765443
No 368
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.21 E-value=0.14 Score=46.50 Aligned_cols=94 Identities=18% Similarity=0.245 Sum_probs=64.8
Q ss_pred hcccchhhhhhhhhhccCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEc-CChhHHHHHHhcCCceeecCCCCC
Q 017336 168 ILSCGVSTGLGATLNVAKP-ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKKFGVTDFVNTSEHD 244 (373)
Q Consensus 168 ~~~~~~~ta~~~l~~~~~~-~~~~~vlI~G-~g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~~~~lg~~~vi~~~~~~ 244 (373)
..||+....+. +++.-++ -.|++|+|+| .+.+|.-++.++...|+ .|+++. ++..
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~~-------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTRD-------------------- 194 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCCC--------------------
Confidence 34554444443 2333333 4799999999 58999999999999999 888883 3321
Q ss_pred ccHHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 245 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 245 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+ .+.+. ..|+|+-++|.+..+...+ ++++ ..++.+|...
T Consensus 195 --l----~e~~~-~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 195 --L----PAVCR-RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred --H----HHHHh-cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 1 11111 4799999999987766554 8886 8888888754
No 369
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.18 Score=44.48 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=35.0
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 232 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l 232 (373)
+++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence 57899987 8999998888888899 799999988887766553
No 370
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=95.19 E-value=0.28 Score=44.29 Aligned_cols=97 Identities=20% Similarity=0.142 Sum_probs=60.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-C-------ceeecCCCCCccHHHHHHHHcCCC
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-V-------TDFVNTSEHDRPIQEVIAEMTNGG 258 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-~-------~~vi~~~~~~~~~~~~~~~~~~~~ 258 (373)
+.+++||++|+|. |..+..+++.....++++++.+++-.+.++++- . ..+ +....+ ..+.++. ..+.
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v-~i~~~D--~~~~l~~-~~~~ 145 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRV-DLQIDD--GFKFLAD-TENT 145 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCce-EEEECc--hHHHHHh-CCCC
Confidence 3456999998865 445556666665568999999988777776631 0 111 000111 3333433 2348
Q ss_pred ccEEEEccC----------ChHhHHHHHHHhhcCCcEEEEE
Q 017336 259 VDRSVECTG----------NIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 259 ~d~vid~~g----------~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
+|+|+--.. ..++++.+.+.|+++ |.++..
T Consensus 146 yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~ 185 (270)
T TIGR00417 146 FDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQ 185 (270)
T ss_pred ccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEc
Confidence 999875332 235677889999997 999876
No 371
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.19 E-value=0.13 Score=45.98 Aligned_cols=76 Identities=26% Similarity=0.381 Sum_probs=47.8
Q ss_pred EEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCceee--cCCCCCccHHHHHHHHc--CCCccE
Q 017336 191 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFV--NTSEHDRPIQEVIAEMT--NGGVDR 261 (373)
Q Consensus 191 ~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~vi--~~~~~~~~~~~~~~~~~--~~~~d~ 261 (373)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+. +.+-...+ |..+. ..+.+.+.+.. .+++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~-~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDK-DDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCH-HHHHHHHHHHHHhcCCCCE
Confidence 6899987 8999999998888999 7999988876654432 22311222 22221 11222232221 137999
Q ss_pred EEEccCC
Q 017336 262 SVECTGN 268 (373)
Q Consensus 262 vid~~g~ 268 (373)
+|++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 372
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.17 E-value=0.32 Score=44.09 Aligned_cols=90 Identities=19% Similarity=0.197 Sum_probs=57.9
Q ss_pred EEEEECCCHHHHHH-HHHHHHcCCcEEEEEcCChhH--HHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 191 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 191 ~vlI~G~g~~G~~a-i~la~~~g~~~V~~~~~~~~~--~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
+|.|+|+|.+|... ..+.+..+++-+.+++.++++ +++++++|...... + +...+. ...+|+||++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~--~----~e~ll~---~~dIDaV~iaTp 73 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAE--G----VDGLLA---NPDIDIVFDATS 73 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEEC--C----HHHHhc---CCCCCEEEECCC
Confidence 58899999999854 556655567334444555543 56777888754331 1 211121 127999999999
Q ss_pred ChHhHHHHHHHhhcCCcEEEEEcC
Q 017336 268 NIDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 268 ~~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
...+.+.+..++.. |+.++...
T Consensus 74 ~~~H~e~a~~al~a--Gk~VIdek 95 (285)
T TIGR03215 74 AKAHARHARLLAEL--GKIVIDLT 95 (285)
T ss_pred cHHHHHHHHHHHHc--CCEEEECC
Confidence 97788888888777 55555443
No 373
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.17 E-value=0.2 Score=43.87 Aligned_cols=73 Identities=26% Similarity=0.412 Sum_probs=54.4
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh--cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK--FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 268 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~--lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 268 (373)
+++|+|+|-+|...++.+...|. .|++++.++++.+...+ +....+. -+..+ .+.++++--..+|+++-++|.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~-gd~t~---~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVI-GDATD---EDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEE-ecCCC---HHHHHhcCCCcCCEEEEeeCC
Confidence 68899999999999999999998 89999999999777433 6654433 22222 234555533389999999988
No 374
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.093 Score=45.89 Aligned_cols=74 Identities=23% Similarity=0.284 Sum_probs=47.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHcCC-CccEEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNG-GVDRSVE 264 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~~~-~~d~vid 264 (373)
.++++||+|+ |.+|...++.+...|+ +|+++.++.++ .+.... ..|..+.. .+.+.+.+.... +.|++|.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADIE-QTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCHH-HHHHHHHHHHHhCCCcEEEE
Confidence 3578999988 8999999999989998 89988887654 122211 12332221 122333333222 6899999
Q ss_pred ccCC
Q 017336 265 CTGN 268 (373)
Q Consensus 265 ~~g~ 268 (373)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 375
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.17 E-value=0.15 Score=46.11 Aligned_cols=103 Identities=15% Similarity=0.230 Sum_probs=63.1
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCChh---HHHHH-HhcCCcee--ecCCCCC--ccHHHHHHHHcC
Q 017336 188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEA-KKFGVTDF--VNTSEHD--RPIQEVIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~~---~~~~~-~~lg~~~v--i~~~~~~--~~~~~~~~~~~~ 256 (373)
.++++||+|+ +++|+++++.+...|+ +|+.++++++ +.+.+ ++++.... .|..+.+ ..+.+.+.+..
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~- 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDL- 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHc-
Confidence 4689999986 4899999998888999 7888877743 22222 34453322 3333221 11222232222
Q ss_pred CCccEEEEccCCh--------------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336 257 GGVDRSVECTGNI--------------D---------------NMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 257 ~~~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+++|+++++.|.. + .....+..|..+ |+++.++...
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~ 146 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG 146 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence 4799999998731 0 233455667775 8888887643
No 376
>PRK08328 hypothetical protein; Provisional
Probab=95.16 E-value=0.12 Score=45.38 Aligned_cols=34 Identities=35% Similarity=0.488 Sum_probs=30.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
+.+|+|+|+|++|..++..+.+.|.++++.++.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4789999999999999999999999999888744
No 377
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.14 E-value=0.13 Score=45.13 Aligned_cols=80 Identities=19% Similarity=0.355 Sum_probs=49.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-eecCCCCC-ccHHHHHHHHcC--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi~~~~~~-~~~~~~~~~~~~--~~ 258 (373)
.++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ +..+... ++..+-.+ ..+.+.+++... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 8999999988888999 899998887654433 2223221 12112111 112222332211 37
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998874
No 378
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.12 E-value=0.13 Score=45.85 Aligned_cols=79 Identities=27% Similarity=0.278 Sum_probs=47.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH---HHHhcCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~---~~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 258 (373)
.++++||+|+ |.+|.+.++.+...|+ +|+++.++++..+ .+.+.+... . .|..+.+ .+.+.+.+.. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPE-SAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHcCC
Confidence 4689999998 8999999999999999 7888877632112 222334321 1 2322211 1222222221 136
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 379
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.12 E-value=0.16 Score=42.57 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=29.4
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 223 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~ 223 (373)
+|+|+|+|++|...++.+-+.|..++..++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999999999998899997764
No 380
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=95.11 E-value=0.17 Score=44.77 Aligned_cols=79 Identities=23% Similarity=0.264 Sum_probs=49.5
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-eecCCCCCc-cHHHHHHHHc--CCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHDR-PIQEVIAEMT--NGG 258 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-vi~~~~~~~-~~~~~~~~~~--~~~ 258 (373)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++...+. +.+... ++..+-.+. .+.+.+.+.. .++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3688999997 8999999999999999 7888888776654432 223221 222221111 1222222221 136
Q ss_pred ccEEEEccC
Q 017336 259 VDRSVECTG 267 (373)
Q Consensus 259 ~d~vid~~g 267 (373)
.|++|.+.|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 899999987
No 381
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.11 E-value=0.22 Score=46.88 Aligned_cols=36 Identities=31% Similarity=0.316 Sum_probs=31.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 223 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~ 223 (373)
...+|||+|+|++|..+++.+-..|.+++..++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 347899999999999999999999999999987653
No 382
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.10 E-value=0.5 Score=41.73 Aligned_cols=102 Identities=17% Similarity=0.164 Sum_probs=59.3
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHH----HHHHhcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRF----EEAKKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG 257 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~----~~~~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~ 257 (373)
++++||+|+ |.+|...++.+...|+ +|+.+.+ +.++. ..+++.+... . .|..+.+ ....+.+.+.. +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-G 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc-C
Confidence 578999987 8999999988888999 6655543 32222 2233344322 2 2222211 01222232322 3
Q ss_pred CccEEEEccCCh----------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336 258 GVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 258 ~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
++|++|.+.|.. + ..+.+.+.++.. |+++.++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 789999998731 0 133445566675 8999988754
No 383
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.08 E-value=0.13 Score=48.82 Aligned_cols=35 Identities=29% Similarity=0.284 Sum_probs=32.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
.+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999999999876
No 384
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=95.08 E-value=0.21 Score=42.75 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=30.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
..+|+|+|+|++|.-++..+-..|.+++..++.+
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 5789999999999999999999999889888654
No 385
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.08 E-value=0.13 Score=45.49 Aligned_cols=78 Identities=29% Similarity=0.389 Sum_probs=49.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 258 (373)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+... . .|..+. ..+.+.+.+.. -++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE-DEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH-HHHHHHHHHHHHhcCC
Confidence 367999997 8999999999888999 89999888776655433 23221 1 222221 11222222221 126
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
.|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999988764
No 386
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.07 E-value=0.23 Score=39.14 Aligned_cols=93 Identities=18% Similarity=0.283 Sum_probs=57.7
Q ss_pred EEEECC-CHHHHHHHHHHHHcC--CcEEEEEcCChh---HHHHHHhcCCceeecCCCCCcc-H----------------H
Q 017336 192 VAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSK---RFEEAKKFGVTDFVNTSEHDRP-I----------------Q 248 (373)
Q Consensus 192 vlI~G~-g~~G~~ai~la~~~g--~~~V~~~~~~~~---~~~~~~~lg~~~vi~~~~~~~~-~----------------~ 248 (373)
|.|+|+ |.+|..++.+.++.. + +|++...... =.+.+++|.+..+...++.... + .
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578898 999999999999887 6 6776654432 2344567888776554432100 1 1
Q ss_pred HHHHHHcC-CCccEEEEccCChHhHHHHHHHhhcCCcEE
Q 017336 249 EVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVA 286 (373)
Q Consensus 249 ~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~g~~ 286 (373)
+.+.+... ..+|+|+.+..+-..+.-.+.++..+ -++
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~i 117 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDI 117 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEE
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeE
Confidence 12223333 37899999877767888888888874 444
No 387
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.02 E-value=0.29 Score=43.24 Aligned_cols=74 Identities=26% Similarity=0.336 Sum_probs=46.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-e--ecCCCCCccHHHHHHHHc--CCCccE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGVDR 261 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~d~ 261 (373)
+++++||+|+ |.+|...+..+...|+ +|++++++. .+..+... . .|..+.+ .+.+.+.+.. .+++|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAA-AVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCE
Confidence 4689999987 8999999998888999 888887765 22222211 1 2222211 1222232221 136899
Q ss_pred EEEccCC
Q 017336 262 SVECTGN 268 (373)
Q Consensus 262 vid~~g~ 268 (373)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999874
No 388
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.00 E-value=0.35 Score=43.22 Aligned_cols=96 Identities=23% Similarity=0.234 Sum_probs=67.4
Q ss_pred hhccCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHc-CCC
Q 017336 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-NGG 258 (373)
Q Consensus 181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~-~~~ 258 (373)
.......++++||=+|+|. |..+..+++.. +. +|++++.++...+.+++.+++.+. .+ . .+.. .+.
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~----~~~~~~~~ 89 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--V----RDWKPKPD 89 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--h----hhCCCCCC
Confidence 4445667889999999876 66777788775 55 899999999998888876654322 11 1 1111 237
Q ss_pred ccEEEEccC-----C-hHhHHHHHHHhhcCCcEEEEE
Q 017336 259 VDRSVECTG-----N-IDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 259 ~d~vid~~g-----~-~~~~~~~~~~l~~~~g~~v~~ 289 (373)
||+|+.... . ...+..+.+.|+|+ |++++.
T Consensus 90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 999998543 2 24677889999997 998765
No 389
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.97 E-value=0.22 Score=43.90 Aligned_cols=38 Identities=26% Similarity=0.386 Sum_probs=32.5
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~ 228 (373)
++++|+|+ |.+|...++.+...|+ +|+++++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence 57999987 8999999999988898 89999988876544
No 390
>PLN00203 glutamyl-tRNA reductase
Probab=94.96 E-value=0.13 Score=50.79 Aligned_cols=82 Identities=18% Similarity=0.297 Sum_probs=55.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcC-Cce-eecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG-VTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg-~~~-vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
+++|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. +++ ... +.. + +.+.+.. ...|+||.|
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~-------~-~dl~~al-~~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKP-------L-DEMLACA-AEADVVFTS 336 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeec-------H-hhHHHHH-hcCCEEEEc
Confidence 689999999999999999999999878999999988866654 453 221 111 1 1122222 268999999
Q ss_pred cCChHh--HHHHHHHh
Q 017336 266 TGNIDN--MISAFECV 279 (373)
Q Consensus 266 ~g~~~~--~~~~~~~l 279 (373)
++.+.. ....++.+
T Consensus 337 T~s~~pvI~~e~l~~~ 352 (519)
T PLN00203 337 TSSETPLFLKEHVEAL 352 (519)
T ss_pred cCCCCCeeCHHHHHHh
Confidence 876532 33444444
No 391
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=94.95 E-value=0.19 Score=45.33 Aligned_cols=89 Identities=19% Similarity=0.227 Sum_probs=63.2
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhH-HHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 269 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~-~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 269 (373)
+|.++|-|.+|.-.++=+...|+ .|.+.++++++ .+++++.|+...-. ..+.. ...|+||-++++.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s-------~~eaa-----~~aDvVitmv~~~ 68 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS-------PAEAA-----AEADVVITMLPDD 68 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC-------HHHHH-----HhCCEEEEecCCH
Confidence 57889999999999999999998 89999999999 88888888864211 11111 1468888888776
Q ss_pred HhHHHHH-------HHhhcCCcEEEEEcCCC
Q 017336 270 DNMISAF-------ECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 270 ~~~~~~~-------~~l~~~~g~~v~~g~~~ 293 (373)
+.....+ ..++++ ..+|.+...+
T Consensus 69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis 98 (286)
T COG2084 69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTIS 98 (286)
T ss_pred HHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence 6555444 233454 6666665543
No 392
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.95 E-value=0.16 Score=45.76 Aligned_cols=94 Identities=18% Similarity=0.228 Sum_probs=64.7
Q ss_pred cccchhhhhhhhhhccCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336 169 LSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 246 (373)
Q Consensus 169 ~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~ 246 (373)
.||+....+.. ++..++ -.|++|+|+|-| .+|.-..+++...|+ .|+++.+.. .+
T Consensus 139 ~PcTp~av~~l-l~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T-------------------~~-- 195 (285)
T PRK10792 139 RPCTPRGIMTL-LERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT-------------------KN-- 195 (285)
T ss_pred CCCCHHHHHHH-HHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC-------------------CC--
Confidence 45544444443 333443 369999999985 699999999999999 888874321 11
Q ss_pred HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+ ++.+. .+|+++.++|.+.++.. +.++++ ..++.+|...
T Consensus 196 l----~~~~~-~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin~ 234 (285)
T PRK10792 196 L----RHHVR-NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGINR 234 (285)
T ss_pred H----HHHHh-hCCEEEEcCCCcccccH--HHcCCC-cEEEEccccc
Confidence 2 22222 58999999999776553 788997 8888888543
No 393
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.94 E-value=0.18 Score=44.87 Aligned_cols=79 Identities=22% Similarity=0.262 Sum_probs=48.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCce-eecCCCCC-ccHHH---HHHHHcCCCc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-FVNTSEHD-RPIQE---VIAEMTNGGV 259 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~-vi~~~~~~-~~~~~---~~~~~~~~~~ 259 (373)
.++++||+|+ |.+|.++++.+...|+ +|+.++++.. ..+.+++.+... .+..+-.+ ....+ .+.+.. +++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF-GHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCC
Confidence 3689999987 8999999999999999 7887765432 223344444322 12111111 11222 222222 379
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|++|++.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 394
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=94.94 E-value=0.98 Score=33.34 Aligned_cols=84 Identities=20% Similarity=0.337 Sum_probs=52.3
Q ss_pred EEEEECCCHHHHHHHHHHHHcC---CcEEE-EEcCChhHHHHH-HhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 191 SVAVFGLGAVGLAAAEGARIAG---ASRII-GVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g---~~~V~-~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
+|.|+|+|.+|.+.+.-+...| . +|+ +.++++++.+.+ ++++...... + ..+.++ ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~~--~----~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATAD--D----NEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEESE--E----HHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccccC--C----hHHhhc-----cCCEEEEE
Confidence 4778899999999999888888 5 677 448998887776 5566543221 1 223332 36999999
Q ss_pred cCChHhHHHHHHH---hhcCCcEEEE
Q 017336 266 TGNIDNMISAFEC---VHDGWGVAVL 288 (373)
Q Consensus 266 ~g~~~~~~~~~~~---l~~~~g~~v~ 288 (373)
+... .+...++. +.++ ..++.
T Consensus 69 v~p~-~~~~v~~~i~~~~~~-~~vis 92 (96)
T PF03807_consen 69 VKPQ-QLPEVLSEIPHLLKG-KLVIS 92 (96)
T ss_dssp S-GG-GHHHHHHHHHHHHTT-SEEEE
T ss_pred ECHH-HHHHHHHHHhhccCC-CEEEE
Confidence 9764 33333333 4443 44443
No 395
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.92 E-value=0.22 Score=50.05 Aligned_cols=75 Identities=17% Similarity=0.240 Sum_probs=56.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336 190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 269 (373)
Q Consensus 190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 269 (373)
++++|+|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+.-. ..+ .+.+++.--+.+|.++-++++.
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD-~~~---~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN-AAN---EEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC-CCC---HHHHHhcCccccCEEEEEcCCh
Confidence 679999999999999999999998 89999999999999999887655422 111 1234443223789888777663
No 396
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.92 E-value=0.18 Score=45.18 Aligned_cols=78 Identities=23% Similarity=0.338 Sum_probs=49.6
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHH---HHHHcC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEV---IAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~---~~~~~~ 256 (373)
.++++||+|+ +.+|..++..+...|+ +|+.+.+++++.+.+. +.+... . .|..+.. ...+. +.+..
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~- 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDED-GVQAMVSQIEKEV- 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhC-
Confidence 5688999987 8999998888888899 7888888876654432 334332 1 2222211 12222 22222
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|++|++.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 368999999874
No 397
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.90 E-value=0.18 Score=45.10 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=47.2
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCcee--ecCCCCC--ccHHHHHHHHcC
Q 017336 188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHD--RPIQEVIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~v--i~~~~~~--~~~~~~~~~~~~ 256 (373)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+.++..+.+++ .+.... .|..+.+ ..+.+.+.+..
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW- 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh-
Confidence 4689999984 4899999988888999 78877665433333333 232222 2322211 11222333322
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 379999999864
No 398
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=94.90 E-value=0.49 Score=40.63 Aligned_cols=97 Identities=21% Similarity=0.200 Sum_probs=63.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc-CCCccEE
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NGGVDRS 262 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~-~~~~d~v 262 (373)
++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+...+- ....+ +.+.+.... .+.+|.|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~~d--~~~~l~~~~~~~~~D~V 115 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLCGD--AVEVLLDMFPDGSLDRI 115 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEecC--HHHHHHHHcCccccceE
Confidence 567888888876 7777777877643489999999988887754 2333221 11112 322233222 3378998
Q ss_pred EEccC--------------ChHhHHHHHHHhhcCCcEEEEE
Q 017336 263 VECTG--------------NIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 263 id~~g--------------~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
+-... ...++..+.+.|+++ |.+++.
T Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~ 155 (202)
T PRK00121 116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFA 155 (202)
T ss_pred EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEE
Confidence 86432 235688999999997 999875
No 399
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.89 E-value=0.13 Score=47.24 Aligned_cols=93 Identities=17% Similarity=0.105 Sum_probs=63.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEEcCChhHHHHH-HhcC---CceeecCCCCCccHHHHHHHHcCCCccE
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEA-KKFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR 261 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~-~~g~~~V~~~~~~~~~~~~~-~~lg---~~~vi~~~~~~~~~~~~~~~~~~~~~d~ 261 (373)
...++++|+|+|..|.+.+..+. ..+.++|.+.+++.++.+.+ +++. .... . .+ +.+.+ .++|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~--~~--~~~av-----~~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--P--LD--GEAIP-----EAVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--E--CC--HHHHh-----hcCCE
Confidence 45678999999999999888876 46877899999998775544 3343 2211 1 11 32223 26899
Q ss_pred EEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 262 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 262 vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
|+.|+.++..+-.. .++++ -.+..+|...
T Consensus 192 VitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~ 220 (304)
T PRK07340 192 VVTATTSRTPVYPE--AARAG-RLVVAVGAFT 220 (304)
T ss_pred EEEccCCCCceeCc--cCCCC-CEEEecCCCC
Confidence 99998876543333 37886 8888888765
No 400
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=94.89 E-value=0.19 Score=42.36 Aligned_cols=93 Identities=13% Similarity=0.150 Sum_probs=56.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHHcCCCccEEEE
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE 264 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid 264 (373)
+++||=+|+|. |..++.+++.....+|++++.+++..+.++ +.+.+.+ .....+ ..+ + ...+.+|+|+.
T Consensus 43 ~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~d--~~~-~--~~~~~fD~I~s 115 (181)
T TIGR00138 43 GKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNGR--AED-F--QHEEQFDVITS 115 (181)
T ss_pred CCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEecc--hhh-c--cccCCccEEEe
Confidence 78888888754 455555565553348999999987666554 3454332 111111 211 1 11237999886
Q ss_pred cc-C-ChHhHHHHHHHhhcCCcEEEEE
Q 017336 265 CT-G-NIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 265 ~~-g-~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
.. . -+..++.+.+.|+++ |+++..
T Consensus 116 ~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 116 RALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred hhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 53 1 124567788999997 998865
No 401
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.25 Score=45.44 Aligned_cols=34 Identities=32% Similarity=0.330 Sum_probs=29.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
.++++||+|+ +++|.++++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4789999987 7999999999999999 78888776
No 402
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=94.88 E-value=0.066 Score=47.59 Aligned_cols=96 Identities=20% Similarity=0.162 Sum_probs=62.0
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc--------e--eecCCCCCccHHHHHHHHcCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--------D--FVNTSEHDRPIQEVIAEMTNG 257 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~--------~--vi~~~~~~~~~~~~~~~~~~~ 257 (373)
..++|||+|.|. |..+-.+++.....+|.+++.+++-.+.++++-.. + ++. .| -...+++....
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~---~D--g~~~l~~~~~~ 149 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII---GD--GRKFLKETQEE 149 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE---ST--HHHHHHTSSST
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE---hh--hHHHHHhccCC
Confidence 679999998755 44455677766666899999999988888774211 1 111 11 44445543333
Q ss_pred CccEEE-EccC---------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336 258 GVDRSV-ECTG---------NIDNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 258 ~~d~vi-d~~g---------~~~~~~~~~~~l~~~~g~~v~~g 290 (373)
.+|+|+ |... +.++++.+.++|+++ |.++.-.
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 150 KYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp -EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred cccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 799977 4443 247889999999997 9888654
No 403
>PRK06720 hypothetical protein; Provisional
Probab=94.87 E-value=0.28 Score=40.87 Aligned_cols=39 Identities=23% Similarity=0.162 Sum_probs=32.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE 227 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~ 227 (373)
.++.++|+|+ +++|...+..+...|+ +|++++++.+..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~ 54 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQ 54 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence 4788999987 7999998888888898 8999988766543
No 404
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.85 E-value=0.33 Score=43.36 Aligned_cols=100 Identities=21% Similarity=0.202 Sum_probs=65.9
Q ss_pred hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCCc
Q 017336 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV 259 (373)
Q Consensus 181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~~ 259 (373)
.....+.++++||=+|+|. |..+..+++..+..+|++++.++...+.+++.-.. .++..+ ..+ + .....+
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d-----~~~-~--~~~~~f 94 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD-----IAS-W--QPPQAL 94 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc-----hhc-c--CCCCCc
Confidence 3445667889999998864 66677888776434899999999988888764221 122111 110 0 112379
Q ss_pred cEEEEccC------ChHhHHHHHHHhhcCCcEEEEEc
Q 017336 260 DRSVECTG------NIDNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 260 d~vid~~g------~~~~~~~~~~~l~~~~g~~v~~g 290 (373)
|+|+.... ....+..+.+.|+++ |.+++..
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 99987543 125688899999997 9988753
No 405
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.83 E-value=0.18 Score=44.78 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=49.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.+++|||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++.+.+. + .|..+.+ .+.+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ-ELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence 4789999987 8999999998888999 788887777665433 2233322 2 2322211 1222222221 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 406
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.81 E-value=0.074 Score=45.80 Aligned_cols=104 Identities=24% Similarity=0.266 Sum_probs=67.8
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHcC-
Q 017336 184 AKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN- 256 (373)
Q Consensus 184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~--g~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~~- 256 (373)
.+....++||-+|.+. |+.++.+|+.+ +. +|++++.++++.+.+++ .|...-+.....+ ..+.+.++..
T Consensus 41 ~~~~~~k~vLEIGt~~-GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~ 116 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTFT-GYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELAND 116 (205)
T ss_dssp HHHHT-SEEEEESTTT-SHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHT
T ss_pred HHhcCCceEEEecccc-ccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhc
Confidence 4445668999998754 77778888776 34 99999999998888754 5653322222222 4444554432
Q ss_pred ---CCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcCC
Q 017336 257 ---GGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 257 ---~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
+.||.||-=.... ..++.++++|+++ |.++.=+..
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~l 157 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNVL 157 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETTT
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcccc
Confidence 3699987644432 4577889999996 888776554
No 407
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.81 E-value=0.38 Score=43.81 Aligned_cols=94 Identities=17% Similarity=0.167 Sum_probs=57.1
Q ss_pred CEEEEECCCHHHHH-HHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 190 SSVAVFGLGAVGLA-AAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 190 ~~vlI~G~g~~G~~-ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
-+|.|+|.|.+|.. +..+.+.-+.+-+.+++.+.+ .+++++++|..... .+ +...+....-..+|+||+++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~----~~--ie~LL~~~~~~dIDiVf~AT 78 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA----EG--IDGLLAMPEFDDIDIVFDAT 78 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc----CC--HHHHHhCcCCCCCCEEEECC
Confidence 46899999999986 445555446644445555554 34667788865321 11 22222211012699999999
Q ss_pred CChHhHHHHHHHhhcCCcEEEEEcC
Q 017336 267 GNIDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 267 g~~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
+...+.+.+.+++.. |+.++...
T Consensus 79 ~a~~H~e~a~~a~ea--Gk~VID~s 101 (302)
T PRK08300 79 SAGAHVRHAAKLREA--GIRAIDLT 101 (302)
T ss_pred CHHHHHHHHHHHHHc--CCeEEECC
Confidence 986677777777666 55555444
No 408
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.81 E-value=0.21 Score=50.71 Aligned_cols=93 Identities=12% Similarity=0.202 Sum_probs=65.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 268 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 268 (373)
.++|+|+|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ -+..+ .+.+++..-..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATR---MDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCC---HHHHHhcCCCcCCEEEEEeCC
Confidence 3689999999999999999999998 899999999999999998875433 22222 122333322379999999988
Q ss_pred hHhHH---HHHHHhhcCCcEEE
Q 017336 269 IDNMI---SAFECVHDGWGVAV 287 (373)
Q Consensus 269 ~~~~~---~~~~~l~~~~g~~v 287 (373)
++.-. ...+.+.|+ -+++
T Consensus 475 ~~~n~~i~~~ar~~~p~-~~ii 495 (621)
T PRK03562 475 PQTSLQLVELVKEHFPH-LQII 495 (621)
T ss_pred HHHHHHHHHHHHHhCCC-CeEE
Confidence 54322 334444554 4443
No 409
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.80 E-value=0.26 Score=47.03 Aligned_cols=82 Identities=21% Similarity=0.347 Sum_probs=50.8
Q ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHH-------HHHhc-CCcee-ecCCCCCccHHHHHHH
Q 017336 184 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-------EAKKF-GVTDF-VNTSEHDRPIQEVIAE 253 (373)
Q Consensus 184 ~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~-------~~~~l-g~~~v-i~~~~~~~~~~~~~~~ 253 (373)
..-..+.+|||+|+ |.+|..++..+...|. +|+++.++..+.+ ..... ++..+ .|..+.+ .+.+.++.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~-~l~~~~~~ 132 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDAD-SLRKVLFS 132 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHH-HHHHHHHH
Confidence 44556789999987 9999999999988898 7888888765321 11112 33322 2332221 13222322
Q ss_pred HcCCCccEEEEccCC
Q 017336 254 MTNGGVDRSVECTGN 268 (373)
Q Consensus 254 ~~~~~~d~vid~~g~ 268 (373)
. +.++|+||+|.+.
T Consensus 133 ~-~~~~D~Vi~~aa~ 146 (390)
T PLN02657 133 E-GDPVDVVVSCLAS 146 (390)
T ss_pred h-CCCCcEEEECCcc
Confidence 2 1169999999864
No 410
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.80 E-value=0.3 Score=43.63 Aligned_cols=97 Identities=25% Similarity=0.230 Sum_probs=61.7
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCceeecCCCCCccHHHHHHHHcCCCccEE
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 262 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~~~~~~~~~~d~v 262 (373)
.++.+||=+|+|. |..+..+++. |. +|++++.+++..+.+++. |...-+.....+ .. .+.....+.+|+|
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d--~~-~l~~~~~~~fD~V 116 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA--AQ-DIAQHLETPVDLI 116 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC--HH-HHhhhcCCCCCEE
Confidence 4567888888865 6677777775 76 899999999888877653 321101111111 21 1222233479999
Q ss_pred EEccC-----C-hHhHHHHHHHhhcCCcEEEEEc
Q 017336 263 VECTG-----N-IDNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 263 id~~g-----~-~~~~~~~~~~l~~~~g~~v~~g 290 (373)
+.... . ...+..+.+.|+|+ |+++++-
T Consensus 117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 86422 2 24678999999997 9997653
No 411
>PLN02823 spermine synthase
Probab=94.79 E-value=0.32 Score=45.22 Aligned_cols=99 Identities=13% Similarity=0.086 Sum_probs=61.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-ce-eecCCCC---CccHHHHHHHHcCCCccEE
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TD-FVNTSEH---DRPIQEVIAEMTNGGVDRS 262 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~-~~-vi~~~~~---~~~~~~~~~~~~~~~~d~v 262 (373)
..++|||+|+|. |..+..+++..+..+|++++.+++-.+.++++-. .. ..+...- -.+..+.+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899998864 4555667776666689999999999999887421 10 0100000 0113344432 34489997
Q ss_pred EEccC------------ChHhHH-HHHHHhhcCCcEEEEE
Q 017336 263 VECTG------------NIDNMI-SAFECVHDGWGVAVLV 289 (373)
Q Consensus 263 id~~g------------~~~~~~-~~~~~l~~~~g~~v~~ 289 (373)
|-=.. +.++++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 75321 124666 788999997 988754
No 412
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.78 E-value=0.23 Score=46.28 Aligned_cols=88 Identities=19% Similarity=0.257 Sum_probs=57.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.|++|.|+|.|.+|...++.++.+|. +|++.+++.+.. ...+++... . + +.+.+. ..|+|+.++.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~----~--~--l~ell~-----~aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY----R--P--LEELLR-----ESDFVSLHVP 213 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe----c--C--HHHHHh-----hCCEEEEeCC
Confidence 57899999999999999999999999 899998765432 233444321 1 1 222221 3577777765
Q ss_pred ChH----hH-HHHHHHhhcCCcEEEEEcC
Q 017336 268 NID----NM-ISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 268 ~~~----~~-~~~~~~l~~~~g~~v~~g~ 291 (373)
..+ .+ ...+..|+++ ..++.++.
T Consensus 214 ~t~~T~~~i~~~~~~~mk~g-a~lIN~aR 241 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPT-AILVNTAR 241 (333)
T ss_pred CChHHhhccCHHHHhcCCCC-eEEEECcC
Confidence 422 12 3566777775 66666654
No 413
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.78 E-value=0.21 Score=45.10 Aligned_cols=78 Identities=21% Similarity=0.318 Sum_probs=47.0
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCCh---hHHHHH-HhcCCcee--ecCCCCC--ccHHHHHHHHcC
Q 017336 188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKFGVTDF--VNTSEHD--RPIQEVIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~---~~~~~~-~~lg~~~v--i~~~~~~--~~~~~~~~~~~~ 256 (373)
.++++||+|+ +++|.+.+..+...|+ +|+.+.+++ ++.+.+ ++++.... .|..+.. ..+.+.+.+..
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 86 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW- 86 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc-
Confidence 5689999986 5899999999888999 788776654 222222 33453222 2222211 11222222222
Q ss_pred CCccEEEEccC
Q 017336 257 GGVDRSVECTG 267 (373)
Q Consensus 257 ~~~d~vid~~g 267 (373)
+++|+++++.|
T Consensus 87 g~iD~lv~nAG 97 (272)
T PRK08159 87 GKLDFVVHAIG 97 (272)
T ss_pred CCCcEEEECCc
Confidence 37999999876
No 414
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.78 E-value=0.082 Score=49.59 Aligned_cols=75 Identities=13% Similarity=0.109 Sum_probs=47.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcC----Ccee-ecCCCCCccHHHHHHHHcCC-Cc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFG----VTDF-VNTSEHDRPIQEVIAEMTNG-GV 259 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg----~~~v-i~~~~~~~~~~~~~~~~~~~-~~ 259 (373)
++++|||+|+ |.+|..+++.+...|. +|++++++....... ..++ ...+ .|..+ .+.+.+...+ ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-----~~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-----AAKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-----HHHHHHHHhhcCC
Confidence 3689999987 9999999999999998 788888765432221 2222 1111 12211 1223333333 68
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|+||++.+.
T Consensus 77 d~vih~A~~ 85 (349)
T TIGR02622 77 EIVFHLAAQ 85 (349)
T ss_pred CEEEECCcc
Confidence 999999873
No 415
>PLN02244 tocopherol O-methyltransferase
Probab=94.77 E-value=0.19 Score=47.00 Aligned_cols=95 Identities=19% Similarity=0.232 Sum_probs=63.0
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCc-e--eecCCCCCccHHHHHHHHcCCCc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT-D--FVNTSEHDRPIQEVIAEMTNGGV 259 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~-~--vi~~~~~~~~~~~~~~~~~~~~~ 259 (373)
+++++||=+|+|. |..+..+++..|+ +|++++.++...+.+++. +.. . ++..+..+ + .+..+.|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~------~-~~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADALN------Q-PFEDGQF 187 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCccc------C-CCCCCCc
Confidence 6788999888865 5667788887788 899999999877766542 332 1 11111110 0 1122379
Q ss_pred cEEEEccCC------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336 260 DRSVECTGN------IDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 260 d~vid~~g~------~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
|+|+..... ...+..+.+.|+++ |++++...
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 999874321 24678899999997 99988653
No 416
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.75 E-value=0.82 Score=42.33 Aligned_cols=90 Identities=22% Similarity=0.287 Sum_probs=62.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
-.|+++.|+|.|.+|.+.++.++.+|. +|+..+++.. .+..+.+++.++- +.+.++ ..|++.-.+
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~~--------l~ell~-----~sDii~l~~ 208 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYVD--------LDELLA-----ESDIISLHC 208 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceecc--------HHHHHH-----hCCEEEEeC
Confidence 358999999999999999999999999 8999988765 4444555554321 212221 468876655
Q ss_pred C-ChH---h-HHHHHHHhhcCCcEEEEEcCC
Q 017336 267 G-NID---N-MISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 267 g-~~~---~-~~~~~~~l~~~~g~~v~~g~~ 292 (373)
+ .++ . =...++.|+++ +.+|.++-.
T Consensus 209 Plt~~T~hLin~~~l~~mk~g-a~lVNtaRG 238 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPG-AILVNTARG 238 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCC-eEEEECCCc
Confidence 4 322 1 23778899997 888877654
No 417
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.74 E-value=0.33 Score=43.60 Aligned_cols=106 Identities=17% Similarity=0.169 Sum_probs=67.6
Q ss_pred hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCC
Q 017336 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGG 258 (373)
Q Consensus 180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~ 258 (373)
+.....+.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.... .-+.....+ +.+ ..+..+.
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~ 117 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT 117 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence 45567888999999998864 5556677777787 899999999888887763221 101111111 100 0111236
Q ss_pred ccEEEEcc-----C---ChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336 259 VDRSVECT-----G---NIDNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 259 ~d~vid~~-----g---~~~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
||+|+..- + ....+..+.+.|+|+ |++++....
T Consensus 118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~ 158 (263)
T PTZ00098 118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC 158 (263)
T ss_pred eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence 99998621 1 124677889999997 999887543
No 418
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=94.73 E-value=0.12 Score=46.91 Aligned_cols=44 Identities=25% Similarity=0.268 Sum_probs=37.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 230 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~ 230 (373)
..++++||+|+|+.+.+++..+...|+.+++++.|+.+|.+.+.
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 34789999999999999998888899989999999988766654
No 419
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.72 E-value=0.26 Score=44.47 Aligned_cols=94 Identities=21% Similarity=0.182 Sum_probs=63.9
Q ss_pred cccchhhhhhhhhhccCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336 169 LSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 246 (373)
Q Consensus 169 ~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~ 246 (373)
.||+....+. +++..++ -.|++|+|+|.| .+|.-.+.++...|+ .|.++.+....
T Consensus 137 ~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t~~--------------------- 193 (285)
T PRK14191 137 VPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILTKD--------------------- 193 (285)
T ss_pred CCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCcHH---------------------
Confidence 4555444444 3344444 369999999986 999999999999999 78777322111
Q ss_pred HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+ .+.+. .+|+|+-++|.+.++. -+.++++ ..++.+|...
T Consensus 194 l----~~~~~-~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~~ 232 (285)
T PRK14191 194 L----SFYTQ-NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGINR 232 (285)
T ss_pred H----HHHHH-hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeeccc
Confidence 1 12221 4799999999977654 4567886 8888888643
No 420
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.72 E-value=0.19 Score=51.71 Aligned_cols=113 Identities=22% Similarity=0.302 Sum_probs=65.8
Q ss_pred eeeEEEEecCceEeCCCCCCchhhhhcccchhhhhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC
Q 017336 143 FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR 221 (373)
Q Consensus 143 ~a~~~~v~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~ 221 (373)
..+|.-+++...+.+ +-.+++++=.-..+ ....-.++++||+|+ |.+|.++++.+...|+ +|+++++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r 446 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL 446 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence 355666666666666 55555554221100 011124689999987 8999999999988999 8999988
Q ss_pred ChhHHHHHH-h----cCCce--e--ecCCCCCccHHHHHHHHc--CCCccEEEEccCC
Q 017336 222 SSKRFEEAK-K----FGVTD--F--VNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN 268 (373)
Q Consensus 222 ~~~~~~~~~-~----lg~~~--v--i~~~~~~~~~~~~~~~~~--~~~~d~vid~~g~ 268 (373)
+.++.+.+. + .+... . .|..+.+ .+.+.+.+.. -+++|++|++.|.
T Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~-~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 447 NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQ-AVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHH-HHHHHHHHHHHhcCCCcEEEECCCC
Confidence 876655432 2 23211 1 2222211 1223333221 2379999999884
No 421
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.69 E-value=0.22 Score=47.62 Aligned_cols=74 Identities=22% Similarity=0.305 Sum_probs=47.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCc-ee--ecCCCCCccHHHHHHHHcCCCccEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRS 262 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~-~v--i~~~~~~~~~~~~~~~~~~~~~d~v 262 (373)
.+++++|+|+ |++|.+.+..+...|+ +|+++++++++.+... +.+.. .. .|..+. +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~-----~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQE-----AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH-----HHHHHHh-CCCCEE
Confidence 4689999988 8999999998888899 8888888776553321 11111 11 222221 2233333 369999
Q ss_pred EEccCC
Q 017336 263 VECTGN 268 (373)
Q Consensus 263 id~~g~ 268 (373)
|++.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 998763
No 422
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.68 E-value=0.084 Score=46.74 Aligned_cols=109 Identities=22% Similarity=0.221 Sum_probs=64.8
Q ss_pred hhhccCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHH-HHHH
Q 017336 180 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQE-VIAE 253 (373)
Q Consensus 180 l~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~-~~~~ 253 (373)
+....++.||++|+=.|.|. |.++..+++..| -.+|+..+.++++.+.+++ +|....+.....| +.+ ...+
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~ 108 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE 108 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence 44568999999999887644 556666776664 3389999999998887754 5654221111111 110 0101
Q ss_pred HcCCCccEEEE-ccCChHhHHHHHHHh-hcCCcEEEEEcCC
Q 017336 254 MTNGGVDRSVE-CTGNIDNMISAFECV-HDGWGVAVLVGVP 292 (373)
Q Consensus 254 ~~~~~~d~vid-~~g~~~~~~~~~~~l-~~~~g~~v~~g~~ 292 (373)
.....+|.||- --.-...+..+.+.| +++ |+++.+...
T Consensus 109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP~ 148 (247)
T PF08704_consen 109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSPC 148 (247)
T ss_dssp T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEESS
T ss_pred cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECCC
Confidence 11236887654 444446899999999 887 999988653
No 423
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.68 E-value=0.33 Score=39.82 Aligned_cols=84 Identities=17% Similarity=0.168 Sum_probs=54.6
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCcee------ecCC-CCCccHHHHHHHHcCCCccEEE
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF------VNTS-EHDRPIQEVIAEMTNGGVDRSV 263 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~v------i~~~-~~~~~~~~~~~~~~~~~~d~vi 263 (373)
+|.|+|+|..|.+++.++...|. .|....++++..+.+++-+.... +... ....++.+.+ .+.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence 58899999999999999999997 89999999888877765332100 0000 0001133323 2689999
Q ss_pred EccCChHhHHHHHHHhhc
Q 017336 264 ECTGNIDNMISAFECVHD 281 (373)
Q Consensus 264 d~~g~~~~~~~~~~~l~~ 281 (373)
-++.+ ..+...++.+++
T Consensus 75 iavPs-~~~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPS-QAHREVLEQLAP 91 (157)
T ss_dssp E-S-G-GGHHHHHHHHTT
T ss_pred ecccH-HHHHHHHHHHhh
Confidence 99988 555666666666
No 424
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.68 E-value=0.25 Score=44.80 Aligned_cols=67 Identities=22% Similarity=0.323 Sum_probs=48.5
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 269 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 269 (373)
+|.|+|.|.+|...+..++..|. .|+++++++++.+.+.+.|.... ...+ . +.+ ...|+||.|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~~~--~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---ASTD--L-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---ccCC--H-hHh-----cCCCEEEEcCCHH
Confidence 58899999999988888888888 89999999998888888775211 1111 1 111 2579999998753
No 425
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.67 E-value=0.2 Score=45.69 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=49.6
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 270 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 270 (373)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... . + ..+.+ ...|+||.|+....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~~~~-----~~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA---E--T--ARQVT-----EQADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc---C--C--HHHHH-----hcCCEEEEecCCHH
Confidence 37889999999988888888898 89999999999888887775321 1 1 21111 14688888877643
Q ss_pred hHH
Q 017336 271 NMI 273 (373)
Q Consensus 271 ~~~ 273 (373)
...
T Consensus 68 ~~~ 70 (291)
T TIGR01505 68 QVE 70 (291)
T ss_pred HHH
Confidence 333
No 426
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.2 Score=45.20 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=30.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK 224 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~ 224 (373)
.++++||+|+ |.+|...+..+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 4678999987 8999999998888999 7888877643
No 427
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.64 E-value=0.25 Score=45.15 Aligned_cols=71 Identities=21% Similarity=0.243 Sum_probs=49.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336 190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 269 (373)
Q Consensus 190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 269 (373)
.+|.|+|.|.+|...+..+...|. +|++.+++.++.+.+.+.|.... .+ +.+.+ ...|+||.|+...
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~---~~----~~e~~-----~~~d~vi~~vp~~ 69 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA---ST----AKAVA-----EQCDVIITMLPNS 69 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---CC----HHHHH-----hcCCEEEEeCCCH
Confidence 368999999999988887778888 89999999988888777765321 11 22211 1468888887754
Q ss_pred HhHH
Q 017336 270 DNMI 273 (373)
Q Consensus 270 ~~~~ 273 (373)
....
T Consensus 70 ~~~~ 73 (296)
T PRK11559 70 PHVK 73 (296)
T ss_pred HHHH
Confidence 4433
No 428
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.64 E-value=0.26 Score=43.81 Aligned_cols=104 Identities=16% Similarity=0.146 Sum_probs=61.8
Q ss_pred cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc--CCcee-ecCCCCCccHHHHHHHHcCCCc
Q 017336 184 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDF-VNTSEHDRPIQEVIAEMTNGGV 259 (373)
Q Consensus 184 ~~~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l--g~~~v-i~~~~~~~~~~~~~~~~~~~~~ 259 (373)
+.-..+++|||+|+ |.+|...+..+...|+ +|+++.++.++....... ++..+ .|..+. .+.+.+....++
T Consensus 12 ~~~~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~l~~~~~~~~ 86 (251)
T PLN00141 12 AENVKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG----SDKLVEAIGDDS 86 (251)
T ss_pred cccccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCC----HHHHHHHhhcCC
Confidence 33344689999997 9999999988888898 788888887665433221 23222 233321 122323322268
Q ss_pred cEEEEccCChH-------------hHHHHHHHhhcC-CcEEEEEcCC
Q 017336 260 DRSVECTGNID-------------NMISAFECVHDG-WGVAVLVGVP 292 (373)
Q Consensus 260 d~vid~~g~~~-------------~~~~~~~~l~~~-~g~~v~~g~~ 292 (373)
|+||.+.|... .....++.+... .++++.++..
T Consensus 87 d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 87 DAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 99998876421 123344444432 2678887764
No 429
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.23 Score=44.57 Aligned_cols=77 Identities=21% Similarity=0.251 Sum_probs=47.7
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHc--CCCc
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NGGV 259 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~~~~ 259 (373)
+++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++.+.+. ++ |..+.. .+.+.+.... .+++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYS-QLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence 36899987 8999999988888899 788888887665433 2233332 12 222211 1222222211 1379
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|++|++.|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999999874
No 430
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.63 E-value=0.84 Score=40.57 Aligned_cols=97 Identities=13% Similarity=0.208 Sum_probs=62.5
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCCccEEE
Q 017336 185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSV 263 (373)
Q Consensus 185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~~d~vi 263 (373)
...++.+||-+|+|. |..+..+++ .|. .|++++.+++..+.+++.... .++..+-.. + ....+.||+|+
T Consensus 39 ~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~------~-~~~~~~fD~V~ 108 (251)
T PRK10258 39 PQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDIES------L-PLATATFDLAW 108 (251)
T ss_pred CccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCccc------C-cCCCCcEEEEE
Confidence 334678899999875 655555554 576 899999999998888775421 122111110 0 11223699998
Q ss_pred EccC------ChHhHHHHHHHhhcCCcEEEEEcCC
Q 017336 264 ECTG------NIDNMISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 264 d~~g------~~~~~~~~~~~l~~~~g~~v~~g~~ 292 (373)
.... -...+..+.+.|+++ |.+++....
T Consensus 109 s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~~ 142 (251)
T PRK10258 109 SNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTLV 142 (251)
T ss_pred ECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeCC
Confidence 7542 124678889999997 998876543
No 431
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.62 E-value=0.25 Score=44.41 Aligned_cols=80 Identities=20% Similarity=0.238 Sum_probs=50.6
Q ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh----HHHHHHhcC-Cc-eeecCCCCC--ccHHHHHHHHcCC
Q 017336 187 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKFG-VT-DFVNTSEHD--RPIQEVIAEMTNG 257 (373)
Q Consensus 187 ~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~----~~~~~~~lg-~~-~vi~~~~~~--~~~~~~~~~~~~~ 257 (373)
..|+.|||+|+ +++|.+.++=..++|+ +++..+.+.+ ..+.+++.| +. .+.|..+.+ ....+.+++..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G- 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG- 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC-
Confidence 46899999987 6999987776677787 7877777653 344455445 21 234433322 113334444433
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
.+|++++.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999998873
No 432
>PLN02256 arogenate dehydrogenase
Probab=94.60 E-value=0.31 Score=44.81 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=58.6
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEE
Q 017336 184 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 263 (373)
Q Consensus 184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vi 263 (373)
..-....+|.|+|.|.+|...+..++..|. .|+++++++. .+.++++|+.. ..+ ..+.+ ....|+||
T Consensus 31 ~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~----~~e~~----~~~aDvVi 97 (304)
T PLN02256 31 LEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD----PDDFC----EEHPDVVL 97 (304)
T ss_pred hccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC----HHHHh----hCCCCEEE
Confidence 333456789999999999998888888887 7888888764 35666677632 111 11111 12478888
Q ss_pred EccCChHhHHHHHHH-----hhcCCcEEEEEcC
Q 017336 264 ECTGNIDNMISAFEC-----VHDGWGVAVLVGV 291 (373)
Q Consensus 264 d~~g~~~~~~~~~~~-----l~~~~g~~v~~g~ 291 (373)
-|+... .+...++- ++++ ..++.++.
T Consensus 98 lavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 98 LCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred EecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence 888753 33333332 3454 56666655
No 433
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.59 E-value=0.3 Score=48.03 Aligned_cols=70 Identities=29% Similarity=0.300 Sum_probs=48.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChh-----HHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEE
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-----RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS 262 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~-----~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~v 262 (373)
.+++|+|+|+|.+|+.++.+++..|+ .|++++.++. ..+.+++.|+......... ...++|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----------ccCCCCEE
Confidence 46789999999999999999999999 7988875542 2344666777544322111 01257888
Q ss_pred EEccCCh
Q 017336 263 VECTGNI 269 (373)
Q Consensus 263 id~~g~~ 269 (373)
+-+.|-+
T Consensus 83 v~s~Gi~ 89 (480)
T PRK01438 83 VTSPGWR 89 (480)
T ss_pred EECCCcC
Confidence 8877753
No 434
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.59 E-value=0.22 Score=45.99 Aligned_cols=89 Identities=17% Similarity=0.259 Sum_probs=57.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.+++|.|+|.|.+|...++.++.+|. +|++.+++.++.. +...+... . .+.+... ..|+|+.+..
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~--~------~l~e~l~-~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR--E------ELSAFLS-QTRVLINLLP 199 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc--c------cHHHHHh-cCCEEEECCC
Confidence 57899999999999999999999999 8999977543321 22111100 0 1222222 4688888776
Q ss_pred ChHh----H-HHHHHHhhcCCcEEEEEcCC
Q 017336 268 NIDN----M-ISAFECVHDGWGVAVLVGVP 292 (373)
Q Consensus 268 ~~~~----~-~~~~~~l~~~~g~~v~~g~~ 292 (373)
..+. + ...++.|+++ ..+|.+|-.
T Consensus 200 lt~~T~~li~~~~l~~mk~g-a~lIN~aRG 228 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDG-AYLLNLARG 228 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCC-cEEEECCCc
Confidence 4322 2 3567778886 777777653
No 435
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.57 E-value=0.11 Score=40.90 Aligned_cols=79 Identities=24% Similarity=0.347 Sum_probs=49.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
.-+|-|+|+|-+|......++..|. .|..+ +++.++.+.+.. ++...+.+..+ .. ..+|++|-++
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iav 76 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAV 76 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S
T ss_pred ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEe
Confidence 3578999999999999999999998 67776 455556666655 34333322211 11 2689999999
Q ss_pred CChHhHHHHHHHhhc
Q 017336 267 GNIDNMISAFECVHD 281 (373)
Q Consensus 267 g~~~~~~~~~~~l~~ 281 (373)
.. +.+....+.|..
T Consensus 77 pD-daI~~va~~La~ 90 (127)
T PF10727_consen 77 PD-DAIAEVAEQLAQ 90 (127)
T ss_dssp -C-CHHHHHHHHHHC
T ss_pred ch-HHHHHHHHHHHH
Confidence 88 677777777765
No 436
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.57 E-value=0.37 Score=43.92 Aligned_cols=38 Identities=24% Similarity=0.338 Sum_probs=33.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHH
Q 017336 190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 228 (373)
Q Consensus 190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~ 228 (373)
++|.|+|+|.+|...++.+...|. .|+..+.+++..+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 479999999999998888888899 89999999988766
No 437
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=94.56 E-value=0.96 Score=42.12 Aligned_cols=134 Identities=19% Similarity=0.236 Sum_probs=78.2
Q ss_pred CEEEEECCCHHH-HHHHHHHHHcC--CcEEEEEcCChhHHH-HHHhcCCceeecCCCCCccHHHHHHHHcCC-CccEEEE
Q 017336 190 SSVAVFGLGAVG-LAAAEGARIAG--ASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE 264 (373)
Q Consensus 190 ~~vlI~G~g~~G-~~ai~la~~~g--~~~V~~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~-~~d~vid 264 (373)
-+|.|+|+|..+ ...+..++..+ +..|.+++++.++.+ .++++|....+ .+ +.++... .+|+|+.
T Consensus 4 irvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~~--~~--------~~~ll~~~~iD~V~I 73 (342)
T COG0673 4 IRVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKAY--TD--------LEELLADPDIDAVYI 73 (342)
T ss_pred eEEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCccc--CC--------HHHHhcCCCCCEEEE
Confidence 368899997444 55666666654 445666678887744 55668876222 11 2233333 6999999
Q ss_pred ccCChHhHHHHHHHhhcCCcEEEEEcCCCCCceeecc-chhhc--ccceEEEEeccCCCCCCCHHHHHHHHHcCCC
Q 017336 265 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKQL 337 (373)
Q Consensus 265 ~~g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~-~~~~~--~~~~i~g~~~~~~~~~~~~~~~~~~l~~~~l 337 (373)
++....+.+.+.++|.. |+=|++..+-..+.-+.. ..... +++.+.-.. ..+....++.+-+++.+|++
T Consensus 74 atp~~~H~e~~~~AL~a--GkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~--~~Rf~p~~~~~k~li~~g~l 145 (342)
T COG0673 74 ATPNALHAELALAALEA--GKHVLCEKPLALTLEEAEELVELARKAGVKLMVGF--NRRFDPAVQALKELIDSGAL 145 (342)
T ss_pred cCCChhhHHHHHHHHhc--CCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeeh--hhhcCHHHHHHHHHHhcCCc
Confidence 99998899999999998 566777543311111111 01111 223332222 22333457778888888855
No 438
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.55 E-value=0.38 Score=42.65 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=68.3
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHh----cCCceeecCCCCCccHHHHHHHHc-
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT- 255 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~~~~~~- 255 (373)
...+..+.++||-+|.+ +|+.++.+|+.++. .+|++++.+++..+.+++ .|...-+.....+ ..+.+.++.
T Consensus 73 ~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~ 149 (247)
T PLN02589 73 MLLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIE 149 (247)
T ss_pred HHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHh
Confidence 33455667889999873 47777778876631 289999999988777644 5643322222222 445555543
Q ss_pred ----CCCccEEEEccCCh---HhHHHHHHHhhcCCcEEEEEcC
Q 017336 256 ----NGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 256 ----~~~~d~vid~~g~~---~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
.+.||.||-=.... ..++.+++.|+++ |.++.=+.
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~DNv 191 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGYDNT 191 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEEcCC
Confidence 24799988654432 5677889999996 88765433
No 439
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.54 E-value=0.11 Score=47.16 Aligned_cols=94 Identities=19% Similarity=0.216 Sum_probs=58.6
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC 265 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~ 265 (373)
..++++||+|+|++|.+++..+...|+.+|++++++.++.+.+.+ ++...-+.. ..+ . .+.. ..+|+||+|
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~----~~~~-~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--L----QEEL-ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--c----hhcc-ccCCEEEEC
Confidence 456889999999999999999999996689999999887665543 432110111 000 1 0111 268999999
Q ss_pred cCChHhH-----HHHHHHhhcCCcEEEEE
Q 017336 266 TGNIDNM-----ISAFECVHDGWGVAVLV 289 (373)
Q Consensus 266 ~g~~~~~-----~~~~~~l~~~~g~~v~~ 289 (373)
+...... .....++.++ ..++.+
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Di 220 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDM 220 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 8753210 1223556654 555444
No 440
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.54 E-value=0.49 Score=44.54 Aligned_cols=97 Identities=16% Similarity=0.313 Sum_probs=63.3
Q ss_pred CEEEEECC-CHHHHHHHHHHHHc--CCcEEEEEc--CChhH-HHHHHhcCCceeecCCCCC-ccH--------------H
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVD--RSSKR-FEEAKKFGVTDFVNTSEHD-RPI--------------Q 248 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~--g~~~V~~~~--~~~~~-~~~~~~lg~~~vi~~~~~~-~~~--------------~ 248 (373)
++|.|+|+ |.+|..++...++. .+ +|+++. ++.++ .+.+++++...+...++.. ..+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57999996 99999999998765 56 666664 33333 4455678887765433211 001 1
Q ss_pred HHHHHHcCC-CccEEEEccCChHhHHHHHHHhhcCCcEEEE
Q 017336 249 EVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVL 288 (373)
Q Consensus 249 ~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~ 288 (373)
+.+.++... .+|+|+.+.++...+.-.+.+++.+ -++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 122333333 6999999988877788899999884 44443
No 441
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.51 E-value=0.47 Score=42.57 Aligned_cols=102 Identities=16% Similarity=0.235 Sum_probs=66.0
Q ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCChhHHHHHHhc-C------Cce--eecCCCCCccHHHHHH
Q 017336 183 VAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF-G------VTD--FVNTSEHDRPIQEVIA 252 (373)
Q Consensus 183 ~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~-~~V~~~~~~~~~~~~~~~l-g------~~~--vi~~~~~~~~~~~~~~ 252 (373)
...+.++++||-+|+|. |..+..+++..+. .+|++++.+++.++.+++. . .+. ++..+..+ +
T Consensus 68 ~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~------l- 139 (261)
T PLN02233 68 WSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD------L- 139 (261)
T ss_pred HhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc------C-
Confidence 34677889999998865 5566777877652 2899999999988887542 1 111 11111110 0
Q ss_pred HHcCCCccEEEEccC------ChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 253 EMTNGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 253 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
.+..+.||+|+...+ -...+.++.+.|+|+ |+++.+....
T Consensus 140 p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~ 185 (261)
T PLN02233 140 PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK 185 (261)
T ss_pred CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence 011236999986433 125688999999997 9998876544
No 442
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.50 E-value=0.16 Score=45.20 Aligned_cols=75 Identities=27% Similarity=0.294 Sum_probs=46.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCC--ccHHHHHHHHcCCCccEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVDRSV 263 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~--~~~~~~~~~~~~~~~d~vi 263 (373)
+++++||+|+ |.+|...++.+...|+ +|++++++.++.. .-.... ..|..+.+ ..+.+.+.+.. +++|++|
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTTAEGCAAVARAVLERL-GGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence 4689999987 8999999998888999 7988888754321 111111 12222211 01122222222 3689999
Q ss_pred EccC
Q 017336 264 ECTG 267 (373)
Q Consensus 264 d~~g 267 (373)
++.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9987
No 443
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.50 E-value=0.29 Score=43.95 Aligned_cols=78 Identities=21% Similarity=0.307 Sum_probs=46.1
Q ss_pred CCCEEEEECCC---HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc----CCcee--ecCCCCCccHHHHHHHHcC--
Q 017336 188 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDF--VNTSEHDRPIQEVIAEMTN-- 256 (373)
Q Consensus 188 ~~~~vlI~G~g---~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l----g~~~v--i~~~~~~~~~~~~~~~~~~-- 256 (373)
.++++||+|++ ++|.++++.+...|+ +|+.++++++..+.++++ +.... .|..+.+ ++.+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDA-SIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHH-HHHHHHHHHHhhc
Confidence 46899999873 799998888888999 788877764222233322 22112 2322211 12222222221
Q ss_pred CCccEEEEccC
Q 017336 257 GGVDRSVECTG 267 (373)
Q Consensus 257 ~~~d~vid~~g 267 (373)
+.+|++|++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 36999999987
No 444
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.46 E-value=0.24 Score=43.81 Aligned_cols=80 Identities=28% Similarity=0.274 Sum_probs=47.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEE-EcCChhHHHH----HHhcCCce-eecCCCCCc-cHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEE----AKKFGVTD-FVNTSEHDR-PIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~-~~~~~~~~~~----~~~lg~~~-vi~~~~~~~-~~~~~~~~~~--~~ 257 (373)
+++++||+|+ |.+|..++..+...|+ +|++ ..++.++.+. +++.+... ++..+-.+. .....+.+.. .+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999987 8999999999999999 6655 4566554432 23344332 221221111 1222222221 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 445
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.45 E-value=0.33 Score=42.51 Aligned_cols=71 Identities=21% Similarity=0.285 Sum_probs=50.6
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh--HHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336 192 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 268 (373)
Q Consensus 192 vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~--~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 268 (373)
|+|+|+ |.+|...++.+...+. +|.++.|+.. +...+++.|+..+ ..+-.+ .+.+.+... |+|.||.+.+.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~---~~~l~~al~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADYDD---PESLVAALK-GVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-TT----HHHHHHHHT-TCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecccCC---HHHHHHHHc-CCceEEeecCc
Confidence 789998 9999999999999888 7888878753 4556677888654 222222 234544444 79999999883
No 446
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=94.44 E-value=0.82 Score=41.48 Aligned_cols=109 Identities=12% Similarity=0.064 Sum_probs=71.9
Q ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-Cce----eecCCCCC--ccHHHHHHHHcCC
Q 017336 186 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VTD----FVNTSEHD--RPIQEVIAEMTNG 257 (373)
Q Consensus 186 ~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-~~~----vi~~~~~~--~~~~~~~~~~~~~ 257 (373)
..+++-|+|+|+ ++.|...+.-+...|+ +|++.--.++..+.++..- -++ .+|..+++ .+..+.+++..+.
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~ 104 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE 104 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence 456778999998 9999999998999999 7777766666655554322 111 23333322 1233445555555
Q ss_pred -CccEEEEccCCh--------------------------HhHHHHHHHhhcCCcEEEEEcCCCCC
Q 017336 258 -GVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPSKD 295 (373)
Q Consensus 258 -~~d~vid~~g~~--------------------------~~~~~~~~~l~~~~g~~v~~g~~~~~ 295 (373)
+.-.++++.|-. ......+..+++..||+|.+++..+.
T Consensus 105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR 169 (322)
T KOG1610|consen 105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR 169 (322)
T ss_pred ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence 777888888721 23445667777777999999887653
No 447
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.42 E-value=0.48 Score=44.05 Aligned_cols=98 Identities=17% Similarity=0.001 Sum_probs=62.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceee--cCCC-CCccHHHHHHHHcCCCccEEEEcc
Q 017336 190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV--NTSE-HDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi--~~~~-~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
-+|.|+|+|.+|.+.+..+...|. .|.+.++++++.+.+++.+..... ...- ..........+.. ...|+||-++
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-~~aD~Vi~~v 82 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-AGADFAVVAV 82 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-cCCCEEEEEC
Confidence 369999999999999999888898 899999988887777654211100 0000 0000000111221 2589999999
Q ss_pred CChHhHHHHHHHhhcCCcEEEEEcC
Q 017336 267 GNIDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 267 g~~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
... .+...++.++++ -.++.+..
T Consensus 83 ~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 83 PSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred chH-HHHHHHHhcCcC-CEEEEEee
Confidence 884 567777888885 66665544
No 448
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=94.41 E-value=0.35 Score=41.61 Aligned_cols=80 Identities=23% Similarity=0.219 Sum_probs=54.0
Q ss_pred EEEEECCCHHHHHHHHHHHH--cCCcEEEEEcCChhHHHHHHh-cCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 191 SVAVFGLGAVGLAAAEGARI--AGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~--~g~~~V~~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
+|.|+|+|.+|...+.+.+. ..++.+++.+++.+|...+.+ ++...+.+ + .++. ..+|++++|.+
T Consensus 2 ~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~-------i----de~~-~~~DlvVEaAS 69 (255)
T COG1712 2 KVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVSD-------I----DELI-AEVDLVVEAAS 69 (255)
T ss_pred eEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCcccc-------H----HHHh-hccceeeeeCC
Confidence 47889999999999999983 467788999999888776544 44432211 1 1121 24677777777
Q ss_pred ChHhHHHHHHHhhcC
Q 017336 268 NIDNMISAFECVHDG 282 (373)
Q Consensus 268 ~~~~~~~~~~~l~~~ 282 (373)
....-+...+.|+.+
T Consensus 70 ~~Av~e~~~~~L~~g 84 (255)
T COG1712 70 PEAVREYVPKILKAG 84 (255)
T ss_pred HHHHHHHhHHHHhcC
Confidence 655556666777764
No 449
>PRK06484 short chain dehydrogenase; Validated
Probab=94.39 E-value=0.21 Score=49.59 Aligned_cols=79 Identities=27% Similarity=0.394 Sum_probs=52.8
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCce---eecCCCCCccHHHHHHHHc--CCCcc
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMT--NGGVD 260 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~---vi~~~~~~~~~~~~~~~~~--~~~~d 260 (373)
+++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++... ..|..+.+ .+.+.+.+.. -+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEA-QIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHH-HHHHHHHHHHHHhCCCC
Confidence 5789999987 8999999999999999 899998887776544 4455432 23333221 1222232221 13799
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
++|++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999774
No 450
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.38 E-value=0.33 Score=45.86 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
...+|+|+|+|++|..++..+.+.|..+++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35689999999999999999999999899999775
No 451
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.37 E-value=0.24 Score=43.82 Aligned_cols=77 Identities=22% Similarity=0.259 Sum_probs=47.6
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CCCc
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NGGV 259 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~~ 259 (373)
+++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+... . .|..+.+ .+.+.+.+.. .++.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~-~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKD-QVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH-HHHHHHHHHHHHcCCC
Confidence 47899987 8999999999999999 788888876654332 2334322 1 2222211 1222222221 1268
Q ss_pred cEEEEccCC
Q 017336 260 DRSVECTGN 268 (373)
Q Consensus 260 d~vid~~g~ 268 (373)
|++|++.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 452
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.35 E-value=0.21 Score=49.58 Aligned_cols=71 Identities=24% Similarity=0.308 Sum_probs=48.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH-hcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~-~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
.++++||+|+|++|.+++..+...|+ +|+++.++.++.+.+. +++.. ++. +.+ ..+......|++++++
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~-------~~~-~~~~~~~~~diiINtT 447 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALT-------LAD-LENFHPEEGMILANTT 447 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eee-------HhH-hhhhccccCeEEEecc
Confidence 46789999999999999999999999 8999999877766554 44432 221 111 1111122578999887
Q ss_pred CC
Q 017336 267 GN 268 (373)
Q Consensus 267 g~ 268 (373)
+-
T Consensus 448 ~v 449 (529)
T PLN02520 448 SV 449 (529)
T ss_pred cC
Confidence 53
No 453
>PRK12743 oxidoreductase; Provisional
Probab=94.34 E-value=0.27 Score=43.72 Aligned_cols=78 Identities=18% Similarity=0.147 Sum_probs=47.0
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHH----HHhcCCce-e--ecCCCCC--ccHHHHHHHHcCC
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE----AKKFGVTD-F--VNTSEHD--RPIQEVIAEMTNG 257 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~----~~~lg~~~-v--i~~~~~~--~~~~~~~~~~~~~ 257 (373)
++++||+|+ |.+|..+++.+...|+ +|+.+. ++.++.+. ++..+... . .|..+.. ..+.+.+.+.. +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-G 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 578999987 8999999999999999 777664 34443332 23345432 2 2322211 01222233222 3
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 454
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.33 E-value=0.31 Score=44.30 Aligned_cols=35 Identities=34% Similarity=0.411 Sum_probs=29.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 223 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~ 223 (373)
.++++||+|+ +++|.+.++.+...|+ +|++++++.
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 5789999987 8999999988888999 777776543
No 455
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.33 E-value=0.15 Score=45.73 Aligned_cols=76 Identities=21% Similarity=0.268 Sum_probs=47.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce-eecCCCCCccHHHHHHHHc--CCCccEEE
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMT--NGGVDRSV 263 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~~~~~~--~~~~d~vi 263 (373)
.++++||+|+ |.+|.++++.+...|+ +|+.+++++++.+. ..... ..|..+.. .+.+.+.+.. -+++|++|
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSAE-EVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence 4688999987 8999999999999999 88888776654321 11111 12322211 1222222221 13789999
Q ss_pred EccCC
Q 017336 264 ECTGN 268 (373)
Q Consensus 264 d~~g~ 268 (373)
++.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
No 456
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.30 E-value=0.35 Score=49.00 Aligned_cols=93 Identities=12% Similarity=0.143 Sum_probs=65.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 017336 190 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI 269 (373)
Q Consensus 190 ~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~ 269 (373)
.+|+|+|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++- +..+ .+.+++.--..+|+++-+.+++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~---~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DATQ---LELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eCCC---HHHHHhcCCccCCEEEEEeCCH
Confidence 579999999999999999999998 8999999999999999988764432 2211 1234443223799999999885
Q ss_pred HhHH---HHHHHhhcCCcEEEE
Q 017336 270 DNMI---SAFECVHDGWGVAVL 288 (373)
Q Consensus 270 ~~~~---~~~~~l~~~~g~~v~ 288 (373)
+.-. ...+.+.|+ -+++.
T Consensus 476 ~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 476 EDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHCCC-CeEEE
Confidence 4322 334445554 45544
No 457
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.29 E-value=0.27 Score=43.19 Aligned_cols=78 Identities=24% Similarity=0.354 Sum_probs=47.2
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChhHHHHHH----hcCCce-ee--cCCCCCccHHHHHHHHcC--C
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN--G 257 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~~~~~~~----~lg~~~-vi--~~~~~~~~~~~~~~~~~~--~ 257 (373)
++++||+|+ |.+|...+..+...|+ +|+.+ +++.++.+.+. ..+... ++ |..+.+ .+.+.+.+... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEE-DVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHhC
Confidence 468999987 8999998888888899 77777 78766654332 222221 22 222211 12222222211 3
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 458
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.28 E-value=0.28 Score=44.34 Aligned_cols=94 Identities=21% Similarity=0.238 Sum_probs=63.9
Q ss_pred cccchhhhhhhhhhccCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336 169 LSCGVSTGLGATLNVAKP-ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 246 (373)
Q Consensus 169 ~~~~~~ta~~~l~~~~~~-~~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~ 246 (373)
.||+....+. +++.-++ -.|++|+|+|.| .+|.-.+.++...|+ +|+++.+. ..+
T Consensus 138 ~PcTp~aii~-lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t~~-- 194 (285)
T PRK14189 138 RPCTPYGVMK-MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------TRD-- 194 (285)
T ss_pred cCCCHHHHHH-HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------CCC--
Confidence 4544443333 2333343 378999999985 669999999999999 78776321 111
Q ss_pred HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+.+.+ . .+|+|+-++|.+.++.. +.++++ ..++.+|...
T Consensus 195 l~~~~----~-~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin~ 233 (285)
T PRK14189 195 LAAHT----R-QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMNR 233 (285)
T ss_pred HHHHh----h-hCCEEEEcCCCcCccCH--HHcCCC-CEEEEccccc
Confidence 22222 2 47999999998776554 889997 8999888754
No 459
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.28 E-value=0.42 Score=46.27 Aligned_cols=103 Identities=14% Similarity=0.202 Sum_probs=63.4
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHH----hcCCce-e--ecCCCCCccHHHHHHHH
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEM 254 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~----~lg~~~-v--i~~~~~~~~~~~~~~~~ 254 (373)
....++++++||=+|+|+ |..++++++.++..+|++++.++++.+.++ ++|... + ++.+... .. . ..
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~--~~-~--~~ 305 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRG--PS-Q--WA 305 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccc--cc-c--cc
Confidence 345678899998887654 444455555555338999999999887664 456652 2 2111111 00 0 00
Q ss_pred cCCCccEEEE---ccCC-------------------------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336 255 TNGGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 255 ~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
..+.||.||- |+|. ...+..+++.|+++ |+++..-.
T Consensus 306 ~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 306 ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 1236999874 4442 24677899999997 99987544
No 460
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.27 E-value=0.35 Score=42.59 Aligned_cols=79 Identities=18% Similarity=0.244 Sum_probs=46.3
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEE-cCChh-HHHHHH---hcCCcee---ecCCCCCccHHHHHHHHc--C
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSK-RFEEAK---KFGVTDF---VNTSEHDRPIQEVIAEMT--N 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~-~~~~~-~~~~~~---~lg~~~v---i~~~~~~~~~~~~~~~~~--~ 256 (373)
.++++||+|+ |.+|..+++.+...|+ +|+.. .+++. ..+.+. +.+.... .|..+.. .+.+.+.+.. -
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWD-STKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHh
Confidence 3578999987 8999999999999999 66664 33332 222332 3344332 2222211 1222222221 1
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 379999999875
No 461
>PRK08223 hypothetical protein; Validated
Probab=94.26 E-value=0.48 Score=42.87 Aligned_cols=35 Identities=31% Similarity=0.304 Sum_probs=31.2
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
...+|||+|+|++|..+++.+-+.|.+++..++.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 35789999999999999999999999999888664
No 462
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=94.26 E-value=0.39 Score=44.01 Aligned_cols=44 Identities=20% Similarity=0.332 Sum_probs=37.4
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~ 235 (373)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+++.+..
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~ 45 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTT 45 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCc
Confidence 58899999999988887778888 899999999998888876653
No 463
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.23 E-value=0.37 Score=44.30 Aligned_cols=78 Identities=24% Similarity=0.293 Sum_probs=46.9
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCh-hHHH----HHHhcCCceee---cCCCCC--ccHHHHHHHHcC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTDFV---NTSEHD--RPIQEVIAEMTN 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~----~~~~lg~~~vi---~~~~~~--~~~~~~~~~~~~ 256 (373)
.++++||+|+ +++|...++.+...|+ +|+++++.. ++.+ .+++.|..... |..+.+ ..+.+.+.+ -
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~ 87 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--L 87 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--h
Confidence 4688999987 8999999988888899 788876542 2222 22334443221 221111 012222222 2
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|++|++.|.
T Consensus 88 g~iD~li~nAG~ 99 (306)
T PRK07792 88 GGLDIVVNNAGI 99 (306)
T ss_pred CCCCEEEECCCC
Confidence 479999998874
No 464
>PRK03612 spermidine synthase; Provisional
Probab=94.22 E-value=0.39 Score=47.69 Aligned_cols=98 Identities=17% Similarity=0.116 Sum_probs=62.9
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcC-C----------ceeecCCCCCccHHHHHHHHc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-V----------TDFVNTSEHDRPIQEVIAEMT 255 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg-~----------~~vi~~~~~~~~~~~~~~~~~ 255 (373)
++.++||++|+|. |..+..+++.-...+|++++.+++-.+.+++.. . +.+ +....| ..+.+++ .
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv-~vi~~D--a~~~l~~-~ 370 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRV-TVVNDD--AFNWLRK-L 370 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCce-EEEECh--HHHHHHh-C
Confidence 4568999998863 556666676544359999999999999888721 1 111 000111 3333333 2
Q ss_pred CCCccEEEEccCCh-----------HhHHHHHHHhhcCCcEEEEEc
Q 017336 256 NGGVDRSVECTGNI-----------DNMISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 256 ~~~~d~vid~~g~~-----------~~~~~~~~~l~~~~g~~v~~g 290 (373)
.+++|+|+--...+ ++++.+.+.|+++ |.++.-.
T Consensus 371 ~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~ 415 (521)
T PRK03612 371 AEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS 415 (521)
T ss_pred CCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence 34899987643321 3677889999997 9988653
No 465
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.21 E-value=0.37 Score=42.30 Aligned_cols=79 Identities=28% Similarity=0.334 Sum_probs=46.1
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChh-HHH-H---HHhcCCce-ee--cCCCCCccHHHHHHHHcC--
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFE-E---AKKFGVTD-FV--NTSEHDRPIQEVIAEMTN-- 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~-~~~-~---~~~lg~~~-vi--~~~~~~~~~~~~~~~~~~-- 256 (373)
.++++||+|+ |.+|...+..+...|+ +|+++.++.. +.+ . ++..+... ++ |..+.+ .+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAE-SVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHHc
Confidence 3578999987 8999999999999999 6766655543 222 2 22233322 22 222211 12222222221
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 268999998874
No 466
>PLN02928 oxidoreductase family protein
Probab=94.17 E-value=0.32 Score=45.57 Aligned_cols=96 Identities=21% Similarity=0.296 Sum_probs=58.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC-----ceeecCCCCCccHHHHHHHHcCCCccEE
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-----TDFVNTSEHDRPIQEVIAEMTNGGVDRS 262 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~-----~~vi~~~~~~~~~~~~~~~~~~~~~d~v 262 (373)
.|+++.|+|.|.+|..+++.++.+|+ +|++.+++..+.. ...++. ....+......++. ++.. ..|+|
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~----ell~-~aDiV 230 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKGGHEDIY----EFAG-EADIV 230 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhh-hhhhccccccccccccccCcccCHH----HHHh-hCCEE
Confidence 57899999999999999999999999 8999987633211 111110 00000000000122 2222 46898
Q ss_pred EEccCChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336 263 VECTGNID-----NMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 263 id~~g~~~-----~~~~~~~~l~~~~g~~v~~g~ 291 (373)
+.++.... +-...+..|+++ ..+|.++-
T Consensus 231 vl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 231 VLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 88876321 223677888886 88877764
No 467
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=94.16 E-value=0.32 Score=44.69 Aligned_cols=44 Identities=27% Similarity=0.447 Sum_probs=37.4
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCc
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 235 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~ 235 (373)
+|.++|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus 2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~ 45 (301)
T PRK09599 2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT 45 (301)
T ss_pred EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence 58899999999988888888898 899999999988887777653
No 468
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.16 E-value=0.58 Score=40.76 Aligned_cols=101 Identities=19% Similarity=0.115 Sum_probs=59.5
Q ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH-HhcCCceeec-------CCCCCcc-HHHHHHHH-
Q 017336 185 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEM- 254 (373)
Q Consensus 185 ~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~-~~lg~~~vi~-------~~~~~~~-~~~~~~~~- 254 (373)
.+.++.+||+.|+|. |.-++-||. .|+ .|++++.++...+.+ ++.+...... +...+-. +...+.+.
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 445678999999875 666666664 699 899999999887765 3333221000 0000000 00001111
Q ss_pred --cCCCccEEEEccC--------ChHhHHHHHHHhhcCCcEEEEE
Q 017336 255 --TNGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 255 --~~~~~d~vid~~g--------~~~~~~~~~~~l~~~~g~~v~~ 289 (373)
..+.||.|+|... ....+....++|+++ |+++++
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 1126899999653 124578899999997 875554
No 469
>PRK06940 short chain dehydrogenase; Provisional
Probab=94.15 E-value=0.38 Score=43.46 Aligned_cols=77 Identities=27% Similarity=0.394 Sum_probs=47.5
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHH-cCCCcc
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEM-TNGGVD 260 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~-~~~~~d 260 (373)
++++||+|+|++|..++..+. .|+ +|+.+++++++.+.+ ++.+... . .|..+.+ .+.+.+.+. ..+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCC
Confidence 467889999999999888875 788 899888887655433 2224322 1 2333221 122223222 114799
Q ss_pred EEEEccCC
Q 017336 261 RSVECTGN 268 (373)
Q Consensus 261 ~vid~~g~ 268 (373)
++|++.|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999874
No 470
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.13 E-value=0.31 Score=45.09 Aligned_cols=37 Identities=19% Similarity=0.155 Sum_probs=30.7
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR 225 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~ 225 (373)
.+++|||+|+ |.+|...+..+...|. +|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4689999987 9999999998888898 78877676554
No 471
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=94.13 E-value=0.46 Score=34.53 Aligned_cols=35 Identities=31% Similarity=0.490 Sum_probs=29.4
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcC
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 221 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~ 221 (373)
-.+++++|+|+|.+|..+++.+...+..++.+.++
T Consensus 21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 45789999999999999999999886557877765
No 472
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.12 E-value=1.4 Score=38.09 Aligned_cols=117 Identities=18% Similarity=0.101 Sum_probs=66.8
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
.+++|||+|+|.+|.-=+.++...|+ +|++++.+. +....+.+-+--..+. ...+ . +.. .++++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~~~------~-~~~-~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-REFD------A-EDL-DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cccC------h-hhh-cCceEEEEeC
Confidence 56899999999999999999999999 788886554 2222222222211111 1111 0 011 1489999999
Q ss_pred CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEe
Q 017336 267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF 315 (373)
Q Consensus 267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 315 (373)
+.++.-+...+..... +.++...+......+.++...-...+.+.-+.
T Consensus 81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT 128 (210)
T COG1648 81 DDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQIAIST 128 (210)
T ss_pred CCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEEEEEC
Confidence 9855555555555554 77776655443223333322112445554333
No 473
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.10 E-value=0.97 Score=39.97 Aligned_cols=104 Identities=17% Similarity=0.165 Sum_probs=60.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHH-HH---hcCCcee---ecCCCCC--ccHHHHHHH---
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE-AK---KFGVTDF---VNTSEHD--RPIQEVIAE--- 253 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~-~~---~lg~~~v---i~~~~~~--~~~~~~~~~--- 253 (373)
.++++||+|+ |.+|.++++.+...|+ +|+.+. +++++.+. .. +.+.... .|..+.+ ..+.+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 4689999987 8999999999999999 677653 44443332 22 2232211 1222211 112222222
Q ss_pred -HcC-CCccEEEEccCCh----------H---------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336 254 -MTN-GGVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 254 -~~~-~~~d~vid~~g~~----------~---------------~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
..+ +++|+++++.|.. + ....+++.+... |+++.++...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~ 147 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA 147 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence 112 2799999988731 0 112345566665 8999888754
No 474
>PRK09135 pteridine reductase; Provisional
Probab=94.10 E-value=0.37 Score=42.40 Aligned_cols=34 Identities=21% Similarity=0.150 Sum_probs=29.2
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
.++++||+|+ |.+|..++..+...|+ +|++++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~ 39 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHR 39 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCC
Confidence 4578999997 8999999988888899 88888775
No 475
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.09 E-value=0.21 Score=41.15 Aligned_cols=44 Identities=30% Similarity=0.341 Sum_probs=37.5
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc
Q 017336 188 RGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 232 (373)
Q Consensus 188 ~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l 232 (373)
.|..|+++|+| ++|...++-+...|+ +|+++.+.++.+.-+-+.
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e 50 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKE 50 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhh
Confidence 46789999985 999999999999999 899999999887766544
No 476
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=94.06 E-value=0.3 Score=43.94 Aligned_cols=86 Identities=20% Similarity=0.183 Sum_probs=51.6
Q ss_pred EEEEECCCHHHHHHHHHHHHc-CCcEEEEEcCChhHHHHHHhcCCc-eeecCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 017336 191 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 268 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~-g~~~V~~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 268 (373)
+|.|+|+|.+|...++..... +.+-+.++.+........+.++.. .++ . .+.++ ...+|+|++|++.
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~~--~--------d~~~l-~~~~DvVve~t~~ 71 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEAVRVV--S--------SVDAL-PQRPDLVVECAGH 71 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccCCeee--C--------CHHHh-ccCCCEEEECCCH
Confidence 689999999999988877655 453233332322221222223211 111 1 12223 2478999999998
Q ss_pred hHhHHHHHHHhhcCCcEEEE
Q 017336 269 IDNMISAFECVHDGWGVAVL 288 (373)
Q Consensus 269 ~~~~~~~~~~l~~~~g~~v~ 288 (373)
..+.+.+.++|..+ -.++.
T Consensus 72 ~~~~e~~~~aL~aG-k~Vvi 90 (265)
T PRK13303 72 AALKEHVVPILKAG-IDCAV 90 (265)
T ss_pred HHHHHHHHHHHHcC-CCEEE
Confidence 77888999999885 45544
No 477
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.06 E-value=0.54 Score=42.33 Aligned_cols=79 Identities=20% Similarity=0.261 Sum_probs=48.4
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHH----HhcCCce-ee--cCCCCCccHHHHHHHHc--CC
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~~ 257 (373)
+.+++||+|+ |.+|...+..+...|+ +|+++.++.++.+.+ +..+... ++ |..+.. .+.+.+.+.. -+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD-SVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHhcC
Confidence 3468999987 8999999998888899 788887776554332 2234332 11 222211 1222222211 13
Q ss_pred CccEEEEccCC
Q 017336 258 GVDRSVECTGN 268 (373)
Q Consensus 258 ~~d~vid~~g~ 268 (373)
++|++|.+.|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 68999998874
No 478
>PRK04266 fibrillarin; Provisional
Probab=94.06 E-value=0.9 Score=39.80 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=61.2
Q ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhc-----CCceeecCCCCCccHHHHHHHHcC
Q 017336 182 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAEMTN 256 (373)
Q Consensus 182 ~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~l-----g~~~vi~~~~~~~~~~~~~~~~~~ 256 (373)
+...++++++||=+|+|. |..+..+++..+..+|++++.+++..+.+.+. ++. .+.-+... . .....+ .
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~-~i~~D~~~--~-~~~~~l-~ 139 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNII-PILADARK--P-ERYAHV-V 139 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcE-EEECCCCC--c-chhhhc-c
Confidence 357888999998888754 44555666666434899999999776644332 221 22111111 0 000011 1
Q ss_pred CCccEEEEccCChH----hHHHHHHHhhcCCcEEEEE
Q 017336 257 GGVDRSVECTGNID----NMISAFECVHDGWGVAVLV 289 (373)
Q Consensus 257 ~~~d~vid~~g~~~----~~~~~~~~l~~~~g~~v~~ 289 (373)
+.+|+|+.....+. .+..+.+.|+++ |++++.
T Consensus 140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred ccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 36999996544322 367888899997 998874
No 479
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.05 E-value=0.38 Score=42.92 Aligned_cols=103 Identities=20% Similarity=0.199 Sum_probs=59.5
Q ss_pred CCCEEEEECC---CHHHHHHHHHHHHcCCcEEEEEcCCh------hHHHHHHhcCCc-ee--ecCCCCC--ccHHHHHHH
Q 017336 188 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS------KRFEEAKKFGVT-DF--VNTSEHD--RPIQEVIAE 253 (373)
Q Consensus 188 ~~~~vlI~G~---g~~G~~ai~la~~~g~~~V~~~~~~~------~~~~~~~~lg~~-~v--i~~~~~~--~~~~~~~~~ 253 (373)
.++++||+|+ +++|.+++..+...|+ +|+.+.++. +..+.+++.+.. .. .|..+.+ ..+.+.+.+
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4689999986 4899999988888999 777664332 222333222211 12 2322221 112223333
Q ss_pred HcCCCccEEEEccCCh-------H----------------------hHHHHHHHhhcCCcEEEEEcCCC
Q 017336 254 MTNGGVDRSVECTGNI-------D----------------------NMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 254 ~~~~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
.. +++|+++++.|.. . .....+..|..+ |+++.++...
T Consensus 84 ~~-g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~ 150 (258)
T PRK07370 84 KW-GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLG 150 (258)
T ss_pred Hc-CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEeccc
Confidence 22 3799999998731 1 123456667775 8988887643
No 480
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.04 E-value=0.18 Score=45.88 Aligned_cols=36 Identities=22% Similarity=0.407 Sum_probs=30.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 223 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~ 223 (373)
.++++||+|+|+.+.+++..+...|+.+++++.|++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 568999999998899877777788988999999984
No 481
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=94.00 E-value=0.69 Score=39.62 Aligned_cols=34 Identities=32% Similarity=0.474 Sum_probs=30.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
..+|+|+|+|++|...+..+-..|.++++.++.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4789999999999999999999999989888654
No 482
>PRK10637 cysG siroheme synthase; Provisional
Probab=93.97 E-value=1.5 Score=42.77 Aligned_cols=117 Identities=17% Similarity=0.083 Sum_probs=66.1
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
.+++|||+|+|.++.-=++.+...|+ +|++++..- +....+.+.|--..+. .+... +.+ .++++||-++
T Consensus 11 ~~~~vlvvGgG~vA~rk~~~ll~~ga-~v~visp~~~~~~~~l~~~~~i~~~~-~~~~~---~dl-----~~~~lv~~at 80 (457)
T PRK10637 11 RDRDCLLVGGGDVAERKARLLLDAGA-RLTVNALAFIPQFTAWADAGMLTLVE-GPFDE---SLL-----DTCWLAIAAT 80 (457)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CCCCh---HHh-----CCCEEEEECC
Confidence 56899999999999887788888899 788885431 2222222222212221 11110 111 2689999999
Q ss_pred CChHhHHHHHHHhhcCCcEEEEEcCCCCCceeeccchhhcccceEEEEe
Q 017336 267 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF 315 (373)
Q Consensus 267 g~~~~~~~~~~~l~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 315 (373)
+.++.-....+..+.. +.++...+......+.++...-...+++--+.
T Consensus 81 ~d~~~n~~i~~~a~~~-~~lvN~~d~~~~~~f~~pa~~~~g~l~iaisT 128 (457)
T PRK10637 81 DDDAVNQRVSEAAEAR-RIFCNVVDAPKAASFIMPSIIDRSPLMVAVSS 128 (457)
T ss_pred CCHHHhHHHHHHHHHc-CcEEEECCCcccCeEEEeeEEecCCEEEEEEC
Confidence 9854444444444453 77777766543444444333222445554333
No 483
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.95 E-value=0.3 Score=44.73 Aligned_cols=83 Identities=18% Similarity=0.217 Sum_probs=52.7
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCC---ccHHHHHHHHcCCCccEEEEccC
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD---RPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~---~~~~~~~~~~~~~~~d~vid~~g 267 (373)
+|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++-|... + +... ........+. ..+|+||-++.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence 58999999999988888888887 7999988888877777655421 0 0000 0000111111 37899999987
Q ss_pred ChHhHHHHHHHhh
Q 017336 268 NIDNMISAFECVH 280 (373)
Q Consensus 268 ~~~~~~~~~~~l~ 280 (373)
.. ....+++.++
T Consensus 76 ~~-~~~~~~~~l~ 87 (304)
T PRK06522 76 AY-QLPAALPSLA 87 (304)
T ss_pred cc-cHHHHHHHHh
Confidence 63 3344444444
No 484
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=93.93 E-value=0.47 Score=42.97 Aligned_cols=77 Identities=18% Similarity=0.170 Sum_probs=45.3
Q ss_pred EEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHh-c----C---CceeecCCCCCccHHHHHHHHcCC-CccE
Q 017336 192 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----G---VTDFVNTSEHDRPIQEVIAEMTNG-GVDR 261 (373)
Q Consensus 192 vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~-l----g---~~~vi~~~~~~~~~~~~~~~~~~~-~~d~ 261 (373)
|||+|+ |.+|...+.-+...+..+++.+++++.++..++. + . ....+..--.+-.-.+.+.+.... ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 799987 9999998888888888799999999988776643 4 1 111111111111123455565555 8999
Q ss_pred EEEccCC
Q 017336 262 SVECTGN 268 (373)
Q Consensus 262 vid~~g~ 268 (373)
||.+..-
T Consensus 81 VfHaAA~ 87 (293)
T PF02719_consen 81 VFHAAAL 87 (293)
T ss_dssp EEE----
T ss_pred EEEChhc
Confidence 9998763
No 485
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.92 E-value=0.6 Score=43.46 Aligned_cols=86 Identities=21% Similarity=0.212 Sum_probs=57.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG 267 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g 267 (373)
.+++|.|+|.|.+|...++.++.+|. +|++.+++.+..... .. +.. + +. +... ..|+|+.++.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~~-~--l~----ell~-~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YKD-S--VK----EAIK-DADIISLHVP 207 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----ccC-C--HH----HHHh-cCCEEEEeCC
Confidence 56789999999999999999999999 899998876542211 00 100 1 22 2221 5789888877
Q ss_pred ChH-----hHHHHHHHhhcCCcEEEEEcC
Q 017336 268 NID-----NMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 268 ~~~-----~~~~~~~~l~~~~g~~v~~g~ 291 (373)
... +....+..|+++ ..+|.++.
T Consensus 208 ~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 208 ANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 542 233566777776 77776654
No 486
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.92 E-value=0.39 Score=42.15 Aligned_cols=77 Identities=23% Similarity=0.296 Sum_probs=44.8
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHHH----HhcCCce-e--ecCCCCCccHHHHHHHHc--CC
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMT--NG 257 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~~~~~~--~~ 257 (373)
.++|||+|+ |.+|...++.+...|+ +|+++.+ +++..+.+ +..+... + .|..+.+ .+.+.+.+.. .+
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~ 83 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKA-ALEAAVAAAVERFG 83 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHH-HHHHHHHHHHHHcC
Confidence 478999998 9999999999999999 5655444 34333322 2233221 2 2222211 1222222221 13
Q ss_pred CccEEEEccC
Q 017336 258 GVDRSVECTG 267 (373)
Q Consensus 258 ~~d~vid~~g 267 (373)
++|++|.+.|
T Consensus 84 ~id~vi~~ag 93 (249)
T PRK12825 84 RIDILVNNAG 93 (249)
T ss_pred CCCEEEECCc
Confidence 7999999887
No 487
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=93.91 E-value=2.1 Score=38.97 Aligned_cols=61 Identities=20% Similarity=0.173 Sum_probs=45.5
Q ss_pred hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEc--CChhHHHHHHhcCCceeecCC
Q 017336 181 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTS 241 (373)
Q Consensus 181 ~~~~~~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~--~~~~~~~~~~~lg~~~vi~~~ 241 (373)
.....++||.+|+=--+|.+|.+.+.+|+.+|++-++++. -+.+|++.++.+|+..+....
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3456799999544434599999999999999995444442 367899999999998765544
No 488
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=93.89 E-value=0.26 Score=45.29 Aligned_cols=88 Identities=18% Similarity=0.212 Sum_probs=50.8
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID 270 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~ 270 (373)
+|+|+|+|++|.+....+.+.| ..|..+.+++. .+.+++-|....-..................+.+|+||-++=. .
T Consensus 2 kI~IlGaGAvG~l~g~~L~~~g-~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa-~ 78 (307)
T COG1893 2 KILILGAGAIGSLLGARLAKAG-HDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKA-Y 78 (307)
T ss_pred eEEEECCcHHHHHHHHHHHhCC-CeEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEecc-c
Confidence 6899999999999988888888 47888866655 6777776653221111000000000111112278999987754 3
Q ss_pred hHHHHHHHhhc
Q 017336 271 NMISAFECVHD 281 (373)
Q Consensus 271 ~~~~~~~~l~~ 281 (373)
..+.+++.+.+
T Consensus 79 q~~~al~~l~~ 89 (307)
T COG1893 79 QLEEALPSLAP 89 (307)
T ss_pred cHHHHHHHhhh
Confidence 33444444443
No 489
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=93.89 E-value=0.21 Score=53.18 Aligned_cols=78 Identities=19% Similarity=0.177 Sum_probs=52.8
Q ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh---------------------hHHHHHHhcCCceeecCCCCCc
Q 017336 187 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR 245 (373)
Q Consensus 187 ~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~---------------------~~~~~~~~lg~~~vi~~~~~~~ 245 (373)
..+++|+|+|+|+.|+.++..+.+.|. .|++.++.+ ...+.++++|++...+..-...
T Consensus 304 ~~gkkVaVIGsGPAGLsaA~~Lar~G~-~VtVfE~~~~~GG~l~yGIP~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG~d 382 (944)
T PRK12779 304 AVKPPIAVVGSGPSGLINAYLLAVEGF-PVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGKT 382 (944)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCCCCceEEccCCCCcChHHHHHHHHHHHHhhcCeEEEeEEeccE
Confidence 358999999999999999999999999 788887643 2345566778765433221110
Q ss_pred cHHHHHHHHcCCCccEEEEccCC
Q 017336 246 PIQEVIAEMTNGGVDRSVECTGN 268 (373)
Q Consensus 246 ~~~~~~~~~~~~~~d~vid~~g~ 268 (373)
-. +.++...++|.||-++|.
T Consensus 383 it---~~~l~~~~yDAV~LAtGA 402 (944)
T PRK12779 383 AT---LEDLKAAGFWKIFVGTGA 402 (944)
T ss_pred Ee---HHHhccccCCEEEEeCCC
Confidence 01 122222268999999886
No 490
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.88 E-value=0.47 Score=41.94 Aligned_cols=77 Identities=19% Similarity=0.218 Sum_probs=45.6
Q ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEc-CChhHHHHH-HhcCCce-e--ecCCCCCccHHHHH---HHHcCCCc
Q 017336 189 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVI---AEMTNGGV 259 (373)
Q Consensus 189 ~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~-~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~~---~~~~~~~~ 259 (373)
++++||+|+ |.+|..++..+...|+ +|+.+. +++++.+.+ .+++... + .|..+.+ .+.+.+ .+..+.++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTDRE-QVQAMFATATEHFGKPI 82 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHH-HHHHHHHHHHHHhCCCC
Confidence 578999987 8999999998888999 676653 344444333 3343221 1 2322211 122222 23333249
Q ss_pred cEEEEccC
Q 017336 260 DRSVECTG 267 (373)
Q Consensus 260 d~vid~~g 267 (373)
|++|.+.|
T Consensus 83 d~li~~ag 90 (253)
T PRK08642 83 TTVVNNAL 90 (253)
T ss_pred eEEEECCC
Confidence 99999875
No 491
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=93.85 E-value=0.4 Score=41.98 Aligned_cols=77 Identities=21% Similarity=0.260 Sum_probs=45.1
Q ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcC-ChhHHHH-HHh---cCCce-e--ecCCCCCccHHHHHHHHc--CCC
Q 017336 190 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE-AKK---FGVTD-F--VNTSEHDRPIQEVIAEMT--NGG 258 (373)
Q Consensus 190 ~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~-~~~~~~~-~~~---lg~~~-v--i~~~~~~~~~~~~~~~~~--~~~ 258 (373)
+++||+|+ |.+|...+..+...|+ +|+++.+ ++++.+. ..+ .+... . .|..+.. .+.+.+.+.. .++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFE-SCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence 47899987 8999999999999999 7777766 4443322 222 22211 1 2222211 1222222221 136
Q ss_pred ccEEEEccCC
Q 017336 259 VDRSVECTGN 268 (373)
Q Consensus 259 ~d~vid~~g~ 268 (373)
+|+||.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 8999999874
No 492
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=93.85 E-value=0.27 Score=40.41 Aligned_cols=94 Identities=23% Similarity=0.268 Sum_probs=54.3
Q ss_pred cccchhhhhhhhhhccC-CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCceeecCCCCCcc
Q 017336 169 LSCGVSTGLGATLNVAK-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 246 (373)
Q Consensus 169 ~~~~~~ta~~~l~~~~~-~~~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~vi~~~~~~~~ 246 (373)
+||+....+.. ++..+ --.|++|+|+|. ..+|.-...++...|+ .|..+.+..+.
T Consensus 16 ~PcTp~aii~l-L~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T~~--------------------- 72 (160)
T PF02882_consen 16 VPCTPLAIIEL-LEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKTKN--------------------- 72 (160)
T ss_dssp --HHHHHHHHH-HHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTSSS---------------------
T ss_pred cCCCHHHHHHH-HHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCCCc---------------------
Confidence 44443333333 33333 347899999997 5899999999999999 78777443211
Q ss_pred HHHHHHHHcCCCccEEEEccCChHhHHHHHHHhhcCCcEEEEEcCCC
Q 017336 247 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 293 (373)
Q Consensus 247 ~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~g~~v~~g~~~ 293 (373)
+. +.+. .+|+|+.++|.+.++. -+.++++ ..++.+|...
T Consensus 73 l~----~~~~-~ADIVVsa~G~~~~i~--~~~ik~g-avVIDvG~~~ 111 (160)
T PF02882_consen 73 LQ----EITR-RADIVVSAVGKPNLIK--ADWIKPG-AVVIDVGINY 111 (160)
T ss_dssp HH----HHHT-TSSEEEE-SSSTT-B---GGGS-TT-EEEEE--CEE
T ss_pred cc----ceee-eccEEeeeeccccccc--cccccCC-cEEEecCCcc
Confidence 21 1222 5799999999876654 3478886 8888887653
No 493
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=93.83 E-value=1.2 Score=39.97 Aligned_cols=101 Identities=21% Similarity=0.266 Sum_probs=62.0
Q ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEEcCChhHHHHHH----hcCCceeecCCCCCccHHHHHHHHcCCC
Q 017336 184 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGG 258 (373)
Q Consensus 184 ~~~~~~~~vlI~G~g~~G~~ai~la~~~g-~~~V~~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~~~~~~~~~ 258 (373)
..++++++||=+|+|+ |..++.++..++ ...|++++.++++.+.++ .+|...+..... + .. .+.. ..+.
T Consensus 67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~-D--~~-~~~~-~~~~ 140 (264)
T TIGR00446 67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF-D--GR-VFGA-AVPK 140 (264)
T ss_pred hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC-C--HH-Hhhh-hccC
Confidence 4567888888887754 444555555553 238999999999887764 456654321111 1 11 1111 1236
Q ss_pred ccEEEE---ccCC-------------------------hHhHHHHHHHhhcCCcEEEEEcC
Q 017336 259 VDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV 291 (373)
Q Consensus 259 ~d~vid---~~g~-------------------------~~~~~~~~~~l~~~~g~~v~~g~ 291 (373)
||+|+- |+|. .+.+..+++.|+++ |+++..-.
T Consensus 141 fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstc 200 (264)
T TIGR00446 141 FDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTC 200 (264)
T ss_pred CCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence 999874 3442 13677889999997 98876543
No 494
>PRK06701 short chain dehydrogenase; Provisional
Probab=93.81 E-value=0.48 Score=43.17 Aligned_cols=79 Identities=22% Similarity=0.213 Sum_probs=47.0
Q ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCChhH-H----HHHHhcCCce-ee--cCCCCCccHHHHHHHHc--C
Q 017336 188 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-F----EEAKKFGVTD-FV--NTSEHDRPIQEVIAEMT--N 256 (373)
Q Consensus 188 ~~~~vlI~G~-g~~G~~ai~la~~~g~~~V~~~~~~~~~-~----~~~~~lg~~~-vi--~~~~~~~~~~~~~~~~~--~ 256 (373)
+++++||+|+ |.+|..++..+...|+ +|+.+.++.++ . +.++..+... ++ |..+.+ .+.+.+.+.. .
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~i~~~~ 122 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEA-FCKDAVEETVREL 122 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHc
Confidence 4789999997 8999999988888899 78888765422 1 2223334322 22 222211 1222222211 1
Q ss_pred CCccEEEEccCC
Q 017336 257 GGVDRSVECTGN 268 (373)
Q Consensus 257 ~~~d~vid~~g~ 268 (373)
+++|++|.+.|.
T Consensus 123 ~~iD~lI~~Ag~ 134 (290)
T PRK06701 123 GRLDILVNNAAF 134 (290)
T ss_pred CCCCEEEECCcc
Confidence 378999998774
No 495
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=93.76 E-value=0.69 Score=44.20 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=30.9
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
...+|||+|+|++|..++..+-+.|.+++..++.+
T Consensus 41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 35689999999999999999999999999888754
No 496
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.75 E-value=1.2 Score=36.57 Aligned_cols=87 Identities=22% Similarity=0.282 Sum_probs=53.6
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh-hHHHHHHhcCCceeecCCCCCccHHHHHHHHcCCCccEEEEcc
Q 017336 188 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 266 (373)
Q Consensus 188 ~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~~~~~~~~~~d~vid~~ 266 (373)
++++|.|+|-|.-|++-.+=+|-.|. .|++..+.. ...+.+++-|.... +..+.++ ..|+|+-.+
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~v~--------~~~eAv~-----~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFEVM--------SVAEAVK-----KADVVMLLL 68 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-ECC--------EHHHHHH-----C-SEEEE-S
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCeec--------cHHHHHh-----hCCEEEEeC
Confidence 47899999999999999999999999 555554554 48888888887532 1333332 479999988
Q ss_pred CCh---HhH-HHHHHHhhcCCcEEEEEc
Q 017336 267 GNI---DNM-ISAFECVHDGWGVAVLVG 290 (373)
Q Consensus 267 g~~---~~~-~~~~~~l~~~~g~~v~~g 290 (373)
... +.+ +.....|+++ ....+.
T Consensus 69 PD~~q~~vy~~~I~p~l~~G--~~L~fa 94 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKPG--ATLVFA 94 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-TT---EEEES
T ss_pred ChHHHHHHHHHHHHhhCCCC--CEEEeC
Confidence 652 233 3445677774 444443
No 497
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=93.75 E-value=0.38 Score=44.12 Aligned_cols=43 Identities=30% Similarity=0.541 Sum_probs=36.6
Q ss_pred EEEEECCCHHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCC
Q 017336 191 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 234 (373)
Q Consensus 191 ~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~ 234 (373)
+|.++|.|.+|...+.-+...|. .|++.++++++.+.+++.|+
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~ 44 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGI 44 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCC
Confidence 57889999999988888888888 78999999988888877775
No 498
>PRK06849 hypothetical protein; Provisional
Probab=93.74 E-value=0.61 Score=44.53 Aligned_cols=93 Identities=13% Similarity=0.060 Sum_probs=57.8
Q ss_pred CCCEEEEECCC-HHHHHHHHHHHHcCCcEEEEEcCChhHHHHHHhcCCce--eec-CCCCCccHHHHHHHHcCC-CccEE
Q 017336 188 RGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVN-TSEHDRPIQEVIAEMTNG-GVDRS 262 (373)
Q Consensus 188 ~~~~vlI~G~g-~~G~~ai~la~~~g~~~V~~~~~~~~~~~~~~~lg~~~--vi~-~~~~~~~~~~~~~~~~~~-~~d~v 262 (373)
..++|||+|++ ..|+..+..++..|. +|+++++++...... +..++. .+. +......+.+.+.+.... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~-s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRF-SRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHH-HHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 45899999984 689999999999999 899998876443321 112222 221 222223366666665555 79999
Q ss_pred EEccCChHhHHHHHHHhhcC
Q 017336 263 VECTGNIDNMISAFECVHDG 282 (373)
Q Consensus 263 id~~g~~~~~~~~~~~l~~~ 282 (373)
|-+......+....+.+.+.
T Consensus 81 IP~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred EECChHHHhHHhhhhhhcCC
Confidence 98875432333344455553
No 499
>PRK13984 putative oxidoreductase; Provisional
Probab=93.74 E-value=0.37 Score=48.88 Aligned_cols=77 Identities=27% Similarity=0.302 Sum_probs=53.6
Q ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCh---------------------hHHHHHHhcCCceeecCCC-C
Q 017336 186 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSE-H 243 (373)
Q Consensus 186 ~~~~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~~---------------------~~~~~~~~lg~~~vi~~~~-~ 243 (373)
.+++++|+|+|+|..|+.++..+++.|. +|+++++.+ ...+.++++|++..++..- .
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4678899999999999999999999998 788886543 1345667788765544321 1
Q ss_pred CccHHHHHHHHcCCCccEEEEccCC
Q 017336 244 DRPIQEVIAEMTNGGVDRSVECTGN 268 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~d~vid~~g~ 268 (373)
+... +.+. ..+|.+|.++|.
T Consensus 359 ~~~~-~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPL-EELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCH-HHHH----hcCCEEEEEcCc
Confidence 1111 1221 269999999995
No 500
>PRK07411 hypothetical protein; Validated
Probab=93.72 E-value=0.45 Score=45.42 Aligned_cols=34 Identities=32% Similarity=0.275 Sum_probs=30.8
Q ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Q 017336 189 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 222 (373)
Q Consensus 189 ~~~vlI~G~g~~G~~ai~la~~~g~~~V~~~~~~ 222 (373)
..+|||+|+|++|..+++.+-+.|.++++.++.+
T Consensus 38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999999999999999988764
Done!