BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017340
MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMME
KYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPD
PKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGF
GLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWL
RNGKKVEVKVPVGCLLIQTGKQASWELFLVQFLADSGFCLIEWLTAGDCLAGMHEVIVTS
RTIDAIKQASEHNRSLWRVSSTLFAHIASDAVLKPLGHFAESPLSRKYPPICAGEFVEQE
LAVINLKGNKGES

High Scoring Gene Products

Symbol, full name Information P value
AT5G48020 protein from Arabidopsis thaliana 1.3e-152
DDB_G0267528 gene from Dictyostelium discoideum 1.9e-89

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017340
        (373 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2162682 - symbol:AT5G48020 "AT5G48020" species...  1125  1.3e-152  2
DICTYBASE|DDB_G0267528 - symbol:DDB_G0267528 species:4468...   706  1.9e-89   2


>TAIR|locus:2162682 [details] [associations]
            symbol:AT5G48020 "AT5G48020" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR eggNOG:COG3491
            GO:GO:0016702 EMBL:AB017064 EMBL:AY087978 EMBL:BT008313
            EMBL:AK227707 IPI:IPI00525980 RefSeq:NP_568689.1 UniGene:At.24388
            ProteinModelPortal:Q9FI36 SMR:Q9FI36 PaxDb:Q9FI36 PRIDE:Q9FI36
            DNASU:834853 EnsemblPlants:AT5G48020.1 GeneID:834853
            KEGG:ath:AT5G48020 TAIR:At5g48020 HOGENOM:HOG000239423
            InParanoid:Q9FI36 OMA:YQVGATP PhylomeDB:Q9FI36
            ProtClustDB:CLSN2689952 Genevestigator:Q9FI36 Uniprot:Q9FI36
        Length = 355

 Score = 1125 (401.1 bits), Expect = 1.3e-152, Sum P(2) = 1.3e-152
 Identities = 204/265 (76%), Positives = 225/265 (84%)

Query:     1 MEVPVIDLAAYLSAXXXXXXXXXXXLCREVSGILRETGALLVKDPRCTVEDNDRFLDMME 60
             ME+PV+DL++YL              CR+VS IL+ETGAL+VKDPRC  +DNDRF+DMME
Sbjct:     1 MELPVVDLSSYLDFSGDELGSDLLESCRQVSRILKETGALIVKDPRCCAQDNDRFIDMME 60

Query:    61 KYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPD 120
              YFE P  FKRLQ+RPNLHYQVG TPEGVE+PRSLVDEEMQEKF  MP E +P IP GPD
Sbjct:    61 NYFEKPDDFKRLQQRPNLHYQVGATPEGVEVPRSLVDEEMQEKFNTMPNEYKPHIPKGPD 120

Query:   121 PKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGF 180
              KWRYMWRVGPRPSNTRF+ELNSEPV+P+GFP W+E MDSWG+KMISA+EVVAEMAAIGF
Sbjct:   121 HKWRYMWRVGPRPSNTRFKELNSEPVVPEGFPGWEEVMDSWGYKMISAVEVVAEMAAIGF 180

Query:   181 GLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWL 240
             GLPKDAFTSLMKQGPHLLAPTG DL  Y +EGT+FAGYHYDLNFLTIHGRSRFPGL IWL
Sbjct:   181 GLPKDAFTSLMKQGPHLLAPTGSDLNCYNEEGTIFAGYHYDLNFLTIHGRSRFPGLYIWL 240

Query:   241 RNGKKVEVKVPVGCLLIQTGKQASW 265
             RNG+KV VKVPVGCLLIQ GKQ  W
Sbjct:   241 RNGEKVAVKVPVGCLLIQAGKQIEW 265

 Score = 385 (140.6 bits), Expect = 1.3e-152, Sum P(2) = 1.3e-152
 Identities = 75/93 (80%), Positives = 82/93 (88%)

Query:   281 IEWLTAGDCLAGMHEVIVTSRTIDAIKQASEHNRSLWRVSSTLFAHIASDAVLKPLGHFA 340
             IEWLTAG+C+AGMHEV+VTS+T DAI  A E NRSLWRVSSTLFAHIASDA LKPLGHFA
Sbjct:   263 IEWLTAGECIAGMHEVVVTSKTKDAITLAKEQNRSLWRVSSTLFAHIASDAELKPLGHFA 322

Query:   341 ESPLSRKYPPICAGEFVEQELAVINLKGNKGES 373
             ES L+ KYP I AGE+VEQEL+VINLKGNKG S
Sbjct:   323 ESSLASKYPAIPAGEYVEQELSVINLKGNKGSS 355


>DICTYBASE|DDB_G0267528 [details] [associations]
            symbol:DDB_G0267528 species:44689 "Dictyostelium
            discoideum" [GO:0045335 "phagocytic vesicle" evidence=IDA]
            [GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0267528
            GO:GO:0045335 EMBL:AAFI02000003 eggNOG:COG3491 RefSeq:XP_647101.1
            ProteinModelPortal:Q55GT3 EnsemblProtists:DDB0189346 GeneID:8615905
            KEGG:ddi:DDB_G0267528 OMA:NTEKPKC ProtClustDB:CLSZ2431500
            Uniprot:Q55GT3
        Length = 345

 Score = 706 (253.6 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
 Identities = 134/261 (51%), Positives = 172/261 (65%)

Query:     5 VIDLAAYLSAXXXXXXXXXXXLCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFE 64
             VID++ +L+             C+++   L+ET  L++K P+   EDN RFLDMMEKY+E
Sbjct:     7 VIDVSRFLADPTSAEALED---CKKLVKTLQETSCLVIKHPKVNEEDNSRFLDMMEKYYE 63

Query:    65 SPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWR 124
              P         P   YQ+G TPE  E PR     E+  K   +P+ +  + P G DPKWR
Sbjct:    64 QPTEELMKDVHPEWSYQLGATPEFTEEPRD--HSEVITKL--LPQYAAHA-PKGADPKWR 118

Query:   125 YMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPK 184
             + WR+G RP +T+F ELN  PVIP  FPEW+  MDSWG  M+S+IE V+EM A G+ LPK
Sbjct:   119 FFWRIGDRPEDTKFPELNCAPVIPKAFPEWQNVMDSWGSLMLSSIETVSEMIATGYNLPK 178

Query:   185 DAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWLRNGK 244
             D+ T+LMK GPHLLAPTG DL+R+G    +FAG+HYD N LTIHG+SR+PGL IWLR+G 
Sbjct:   179 DSITNLMKNGPHLLAPTGSDLKRFGNLDQIFAGFHYDFNLLTIHGKSRYPGLYIWLRDGT 238

Query:   245 KVEVKVPVGCLLIQTGKQASW 265
             +V VKVP GCLL+Q GKQ  W
Sbjct:   239 RVPVKVPNGCLLLQAGKQLEW 259

 Score = 206 (77.6 bits), Expect = 1.9e-89, Sum P(2) = 1.9e-89
 Identities = 41/86 (47%), Positives = 55/86 (63%)

Query:   281 IEWLTAGDCLAGMHEVIVTSRTIDAIKQASEHNRSLWRVSSTLFAHIASDAVLKPLGHFA 340
             +EW+T GD LAG HEV+VT  T+  ++++ +  +SLWR+SSTLF H+ASD  L  L  F 
Sbjct:   257 LEWITGGDILAGFHEVVVTEDTLKVMEKSKDEGKSLWRISSTLFGHVASDKNLTLLEPFN 316

Query:   341 ESPLSRKYPPICAGEFVEQELAVINL 366
                   KYP I AG+  E EL +I L
Sbjct:   317 NPQNLEKYPNILAGKQSEAELEMIKL 342


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      373       362   0.00082  117 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  628 (67 KB)
  Total size of DFA:  271 KB (2142 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.56u 0.22s 28.78t   Elapsed:  00:00:02
  Total cpu time:  28.56u 0.22s 28.78t   Elapsed:  00:00:02
  Start:  Sat May 11 06:32:21 2013   End:  Sat May 11 06:32:23 2013

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