Query 017340
Match_columns 373
No_of_seqs 214 out of 1161
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 12:51:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017340.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017340hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 9.7E-74 3.3E-78 553.9 29.3 305 2-367 6-312 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 2.9E-69 9.8E-74 531.2 28.6 296 2-365 46-346 (356)
3 1odm_A Isopenicillin N synthas 100.0 8.4E-69 2.9E-73 523.2 28.0 303 2-370 8-330 (331)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 1.3E-67 4.3E-72 512.2 19.9 284 1-363 2-292 (319)
5 1dcs_A Deacetoxycephalosporin 100.0 2E-66 6.9E-71 502.3 16.0 292 1-367 3-308 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 9E-64 3.1E-68 477.0 25.7 270 1-366 2-279 (280)
7 2rg4_A Uncharacterized protein 92.4 1 3.5E-05 40.2 10.8 44 243-329 166-209 (216)
8 3dkq_A PKHD-type hydroxylase S 85.9 1.8 6.3E-05 39.3 7.4 49 234-327 147-195 (243)
9 2hbt_A EGL nine homolog 1; pro 73.1 6.7 0.00023 35.5 6.6 37 25-62 14-50 (247)
10 3tht_A Alkylated DNA repair pr 72.8 5.7 0.00019 38.0 6.3 47 215-262 210-262 (345)
11 3o2g_A Gamma-butyrobetaine dio 63.1 4.9 0.00017 38.9 3.7 52 2-65 122-173 (388)
12 2dbn_A Hypothetical protein YB 62.5 4.8 0.00016 39.9 3.4 53 2-65 100-152 (461)
13 3i3q_A Alpha-ketoglutarate-dep 60.8 17 0.00057 32.2 6.4 47 215-262 117-172 (211)
14 2iuw_A Alkylated repair protei 56.2 24 0.00081 31.6 6.7 20 243-262 184-203 (238)
15 3s57_A Alpha-ketoglutarate-dep 56.1 26 0.00089 30.6 6.9 19 244-262 158-176 (204)
16 3itq_A Prolyl 4-hydroxylase, a 42.7 72 0.0025 28.0 7.6 21 41-61 42-62 (216)
17 2opi_A L-fuculose-1-phosphate 41.5 20 0.00068 31.4 3.7 50 2-61 125-176 (212)
18 2jig_A Prolyl-4 hydroxylase; h 39.2 42 0.0015 29.3 5.5 26 36-61 18-43 (224)
19 1otj_A Alpha-ketoglutarate-dep 35.9 30 0.001 31.3 4.1 36 25-63 30-65 (283)
20 1e4c_P L-fuculose 1-phosphate 35.7 27 0.00092 30.6 3.6 50 2-61 122-173 (215)
21 2fk5_A Fuculose-1-phosphate al 35.1 34 0.0012 29.7 4.1 38 24-61 130-175 (200)
22 1pvt_A Sugar-phosphate aldolas 32.5 36 0.0012 30.2 3.9 50 2-61 161-212 (238)
23 2da7_A Zinc finger homeobox pr 32.3 20 0.00068 26.1 1.7 42 151-192 13-54 (71)
24 4ay7_A Methylcobalamin\: coenz 31.6 59 0.002 30.4 5.5 41 24-64 304-348 (348)
25 1oih_A Putative alkylsulfatase 28.2 46 0.0016 30.4 4.0 37 25-64 40-77 (301)
26 2v9l_A Rhamnulose-1-phosphate 26.1 37 0.0013 30.9 2.9 38 24-61 191-230 (274)
27 2x4k_A 4-oxalocrotonate tautom 23.4 54 0.0018 21.7 2.7 26 163-188 17-42 (63)
28 3pvj_A Alpha-ketoglutarate-dep 22.0 86 0.0029 28.4 4.5 38 24-64 27-64 (277)
29 3ocr_A Class II aldolase/adduc 21.7 48 0.0016 30.3 2.7 51 2-61 156-208 (273)
30 3abf_A 4-oxalocrotonate tautom 21.2 89 0.003 20.9 3.5 24 164-187 16-39 (64)
31 3r1j_A Alpha-ketoglutarate-dep 20.4 90 0.0031 28.7 4.4 39 24-65 33-72 (301)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=9.7e-74 Score=553.88 Aligned_cols=305 Identities=25% Similarity=0.356 Sum_probs=263.9
Q ss_pred CCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHhhCCCHhhhhhhccCCCCCc
Q 017340 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHYQ 81 (373)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~fF~lP~e~K~~~~~~~~~~~ 81 (373)
+||||||+.+.+ ++.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... ...+
T Consensus 6 ~iPvIDls~~~~--------~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~ 76 (312)
T 3oox_A 6 AIDPVSFSLYAK--------DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGA 76 (312)
T ss_dssp SSCCEETHHHHH--------CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGT
T ss_pred CCCeEEChHhcc--------cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCc
Confidence 599999998753 3578999999999999999999999999999999999999999999999999875 3457
Q ss_pred eecccCCcccCcCcchhHHHHHHhcCCCCCCCCCCCCCCCccccceecCCC-CCCcccccCCCCCCCCCCChhhHHHHHH
Q 017340 82 VGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPR-PSNTRFQELNSEPVIPDGFPEWKETMDS 160 (373)
Q Consensus 82 ~GY~~~g~e~~~~~~d~~~~e~~~~~~~~~~~~~~~~~D~k~~~~~~~~~~-p~~~~~~~~~~~n~wP~~~p~fr~~~~~ 160 (373)
+||++.+.|...+. ..+|.| |+|.++.+ +.+..+.....+|.||+.+|+||+.+++
T Consensus 77 ~Gy~~~g~e~~~~~---------------------~~~D~k--E~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~ 133 (312)
T 3oox_A 77 RGYIPFGVETAKGA---------------------DHYDLK--EFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSW 133 (312)
T ss_dssp SEEECCCCCCSTTS---------------------CSCCCC--EEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHH
T ss_pred cccccccceecCCC---------------------CCCCce--eeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHH
Confidence 99999888764321 235755 67777654 3223333456789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCChhHHhhhhcCCCcccccCCCCCcCCCCCCceeeeccCCCCcEEEEecCCCCceeEEe
Q 017340 161 WGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWL 240 (373)
Q Consensus 161 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lrp~~~~~~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~ 240 (373)
|+++|.+++.+|+++|+++||+++++|.+.+..+.+.||..+|++...+++. +|+++|||+|+||||+||+++||||++
T Consensus 134 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~-~g~~~HtD~g~lTlL~qd~v~GLqV~~ 212 (312)
T 3oox_A 134 LYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLRLLHYPPIPKDATG-VRAGAHGDINTITLLLGAEEGGLEVLD 212 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTTCCCEEEEEEECCCSSCCC---CEEEECCCSSEEEEECCTTSCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCcceeeeEecCCCCCCcCC-cCccceecCceEEEEeEcCcCceEEEC
Confidence 9999999999999999999999999999999888888998888755433334 999999999999999999999999999
Q ss_pred cCCcEEEeecCCCeEEEEeCCCCchhHHHHHHhhccccchhhhhcCCceecccceeeccCcchhhhhhhhccCCCCceeE
Q 017340 241 RNGKKVEVKVPVGCLLIQTGKQASWELFLVQFLADSGFCLIEWLTAGDCLAGMHEVIVTSRTIDAIKQASEHNRSLWRVS 320 (373)
Q Consensus 241 ~~G~W~~V~~~~g~lvVniGd~~~~~~~~~~~~~~~~~~~l~~~TnG~~~st~HRV~~~~~~~~~~~~~~~~~~~~~R~S 320 (373)
++|+|++|+|+||++||||||+ ||+||||+||||+|||++++.. ....+|||
T Consensus 213 ~~g~W~~V~p~pg~~vVNiGD~------------------l~~~TnG~~kS~~HRVv~~~~~----------~~~~~R~S 264 (312)
T 3oox_A 213 RDGQWLPINPPPGCLVINIGDM------------------LERLTNNVLPSTVHRVVNPPPE----------RRGVPRYS 264 (312)
T ss_dssp TTSCEEECCCCSSCEEEEECHH------------------HHHHTTTSSCCCCEEECCCCGG----------GTTSCEEE
T ss_pred CCCcEEECCCCCCeEEEEhHHH------------------HHHHhCCeecCCCceEeCCCcc----------CCCCCEEE
Confidence 9999999999999999999999 9999999999999999876532 12237999
Q ss_pred EEEeeecCCCceeecCCcccCCCCCCCCC-CccHHHHHHHHHHHHhhc
Q 017340 321 STLFAHIASDAVLKPLGHFAESPLSRKYP-PICAGEFVEQELAVINLK 367 (373)
Q Consensus 321 i~~F~~p~~d~~i~pl~~~~~~~~~~~y~-~it~~e~~~~~~~~~~~~ 367 (373)
|+||++|+.|++|.|+++|+++++|++|+ ++|++||+.+|+++++++
T Consensus 265 ia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~~l~ 312 (312)
T 3oox_A 265 TPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREIKLA 312 (312)
T ss_dssp CCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHHC--
T ss_pred EEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999 999999999999998763
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=2.9e-69 Score=531.21 Aligned_cols=296 Identities=18% Similarity=0.187 Sum_probs=257.4
Q ss_pred CCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHhhCCCHhhhhhhccCCC-CC
Q 017340 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNL-HY 80 (373)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~fF~lP~e~K~~~~~~~~-~~ 80 (373)
+||||||+.+.+++ +++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++..... ..
T Consensus 46 ~iPvIDls~l~~~~----~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~ 121 (356)
T 1gp6_A 46 QVPTIDLKNIESDD----EKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK 121 (356)
T ss_dssp CCCEEECTTTTCSC----HHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTB
T ss_pred CCCEEEchhccCCC----hHHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccC
Confidence 49999999987655 56788899999999999999999999999999999999999999999999999987543 34
Q ss_pred ceecccCCcccCcCcchhHHHHHHhcCCCCCCCCCCCCCCCccccceecCCCCCCcccccCCCCCCCCCCChhhHHHHHH
Q 017340 81 QVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDS 160 (373)
Q Consensus 81 ~~GY~~~g~e~~~~~~d~~~~e~~~~~~~~~~~~~~~~~D~k~~~~~~~~~~p~~~~~~~~~~~n~wP~~~p~fr~~~~~ 160 (373)
.+||...+.+... ...|.| +.|.++..|.. ...+|.||+.+|+||+.+++
T Consensus 122 ~~Gy~~~~~~~~~-----------------------~~~d~k--E~~~~~~~p~~-----~~~~~~wP~~~~~fr~~~~~ 171 (356)
T 1gp6_A 122 IQGYGSKLANNAS-----------------------GQLEWE--DYFFHLAYPEE-----KRDLSIWPKTPSDYIEATSE 171 (356)
T ss_dssp CSEEECCCCCSTT-----------------------CCCCSC--EEEEEEEESGG-----GCCGGGSCCSSTTHHHHHHH
T ss_pred ccccCcCcccCCC-----------------------CCCChh--heeeeecCCcc-----ccccccCCCcchhhhHHHHH
Confidence 6899876543211 234544 66666543321 13578999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCChhHHhhhhc---CCCcccccCCCCCcCCCCCCceeeeccCCCCcEEEEecCCCCcee
Q 017340 161 WGHKMISAIEVVAEMAAIGFGLPKDAFTSLMK---QGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLN 237 (373)
Q Consensus 161 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~---~~~~~lrp~~~~~~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLq 237 (373)
|+++|.+++..|+++|+++|||++++|.+.+. .+.+.||..+|++... ++..+|+++|||+|+||||+||.++|||
T Consensus 172 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~-~~~~~g~~~HtD~g~lTlL~qd~v~GLQ 250 (356)
T 1gp6_A 172 YAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQ-PELALGVEAHTDVSALTFILHNMVPGLQ 250 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSS-TTTCCSEEEECCCSSEEEEEECSCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCC-cccccCcCCccCCCeEEEEEEcCCCCeE
Confidence 99999999999999999999999999999887 3567788777765432 3557899999999999999999999999
Q ss_pred EEecCCcEEEeecCCCeEEEEeCCCCchhHHHHHHhhccccchhhhhcCCceecccceeeccCcchhhhhhhhccCCCCc
Q 017340 238 IWLRNGKKVEVKVPVGCLLIQTGKQASWELFLVQFLADSGFCLIEWLTAGDCLAGMHEVIVTSRTIDAIKQASEHNRSLW 317 (373)
Q Consensus 238 V~~~~G~W~~V~~~~g~lvVniGd~~~~~~~~~~~~~~~~~~~l~~~TnG~~~st~HRV~~~~~~~~~~~~~~~~~~~~~ 317 (373)
|+ ++|+|++|+|.||+|||||||+ ||+||||+||||+|||+.++.. +
T Consensus 251 V~-~~g~Wi~V~p~pgalvVNiGD~------------------l~~~TnG~~kS~~HRVv~~~~~--------------~ 297 (356)
T 1gp6_A 251 LF-YEGKWVTAKCVPDSIVMHIGDT------------------LEILSNGKYKSILHRGLVNKEK--------------V 297 (356)
T ss_dssp EE-ETTEEEECCCCTTCEEEEECHH------------------HHHHTTTSSCCCCEEECCCSSC--------------C
T ss_pred Ee-cCCcEEECcCCCCeEEEEeccH------------------HHHhcCCEeeccCceecCCCCC--------------C
Confidence 98 6899999999999999999999 9999999999999999987643 8
Q ss_pred eeEEEEeeecCCCc-eeecCCcccCCCCCCCCCCccHHHHHHHHHHHHh
Q 017340 318 RVSSTLFAHIASDA-VLKPLGHFAESPLSRKYPPICAGEFVEQELAVIN 365 (373)
Q Consensus 318 R~Si~~F~~p~~d~-~i~pl~~~~~~~~~~~y~~it~~e~~~~~~~~~~ 365 (373)
||||+||++|+.|+ +|.|+++++++++|++|+++|++||+..|+...+
T Consensus 298 R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~ 346 (356)
T 1gp6_A 298 RISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKE 346 (356)
T ss_dssp EEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHH
T ss_pred EEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhcc
Confidence 99999999999999 9999999999889999999999999999988765
No 3
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=8.4e-69 Score=523.23 Aligned_cols=303 Identities=17% Similarity=0.235 Sum_probs=257.8
Q ss_pred CCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHh-hCCCHhhhhhhccCCCCC
Q 017340 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKY-FESPFHFKRLQERPNLHY 80 (373)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~f-F~lP~e~K~~~~~~~~~~ 80 (373)
+||||||+.|.+++ +++|.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.+
T Consensus 8 ~iPvIDls~l~~~~----~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~----- 75 (331)
T 1odm_A 8 NVPKIDVSPLFGDD----QAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI----- 75 (331)
T ss_dssp CCCEEECGGGGSSC----HHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----
T ss_pred CCCEEEchHhcCCC----hHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----
Confidence 69999999997665 5678899999999999999999999999 999999999999 9999999999975
Q ss_pred ceecccCCcccCcCcchhHHHHHHhcCCCCCCCCCCCCCCCccccceecCCC-C-CCccc---ccCCCCCCCCCC--Chh
Q 017340 81 QVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPR-P-SNTRF---QELNSEPVIPDG--FPE 153 (373)
Q Consensus 81 ~~GY~~~g~e~~~~~~d~~~~e~~~~~~~~~~~~~~~~~D~k~~~~~~~~~~-p-~~~~~---~~~~~~n~wP~~--~p~ 153 (373)
+||.+.+.|...... +. .....+|.| |.|.++.+ + ..+.. ..+..+|.||+. +|+
T Consensus 76 -~Gy~~~~~e~~~~~~----------~~-----~~~~~~d~k--E~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~ 137 (331)
T 1odm_A 76 -RAYNKEHQDQVRAGY----------YL-----SIPGKKAVE--SFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPG 137 (331)
T ss_dssp -TTTCTTCTTCSSSEE----------EC-----CBTTTBCCE--EEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTT
T ss_pred -cCCCcCCcccccccc----------cc-----ccCCCCChh--heEecccCCccccccccccccccCCCCCCCCCCChH
Confidence 699888776532100 00 000234655 66666654 1 11111 124568999998 999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhCCCChhHHhhhhcCCCcccc--cCCCC------C---cCCCCCC-ceeeeccCC
Q 017340 154 WKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLA--PTGCD------L---RRYGKEG-TVFAGYHYD 221 (373)
Q Consensus 154 fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr--p~~~~------~---~~~~~~~-~~~~~~HtD 221 (373)
||+.+++|+++|.+++..|+++|+++|||++++|.+.+..+.+.|| ..+|+ + .. .++. .+|+++|||
T Consensus 138 fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~-~~~~~~~g~~~HtD 216 (331)
T 1odm_A 138 FQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKT-AADGTKLSFEWHED 216 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEE-CTTSCEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCC-CccccccccccccC
Confidence 9999999999999999999999999999999999999988888899 88887 4 22 2233 899999999
Q ss_pred CCcEEEEecCCCCceeEEecCCcEEEeecCCCeEEEEeCCCCchhHHHHHHhhccccchhhhhcCCceecccceeeccCc
Q 017340 222 LNFLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQASWELFLVQFLADSGFCLIEWLTAGDCLAGMHEVIVTSR 301 (373)
Q Consensus 222 ~g~lTlL~qd~~~GLqV~~~~G~W~~V~~~~g~lvVniGd~~~~~~~~~~~~~~~~~~~l~~~TnG~~~st~HRV~~~~~ 301 (373)
+|+||||+||+++||||++++| |++|+|+||++||||||+ ||+||||+||||+|||+.+ .
T Consensus 217 ~g~lTlL~qd~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~------------------l~~~TnG~~kS~~HRVv~~-~ 276 (331)
T 1odm_A 217 VSLITVLYQSNVQNLQVETAAG-YQDIEADDTGYLINCGSY------------------MAHLTNNYYKAPIHRVKWV-N 276 (331)
T ss_dssp SSSEEEEEECSSCCEEEEETTE-EEECCCCTTSEEEEECHH------------------HHHHTTTSSCCCCEEEECC-C
T ss_pred CCeEEEEeeCCCCCEEEEcCCC-eEECCCCCCeEEEEccHH------------------HHHHhCCEeeCCCceeCCC-C
Confidence 9999999999999999999999 999999999999999999 9999999999999999865 2
Q ss_pred chhhhhhhhccCCCCceeEEEEeeecCCCceeecCCcccCCCCCCCCCCccHHHHHHHHHHHHhhcCCC
Q 017340 302 TIDAIKQASEHNRSLWRVSSTLFAHIASDAVLKPLGHFAESPLSRKYPPICAGEFVEQELAVINLKGNK 370 (373)
Q Consensus 302 ~~~~~~~~~~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~it~~e~~~~~~~~~~~~~~~ 370 (373)
. +||||+||++|+.|++|.|+++++++++ ++|+++|++||++.|++....+|++
T Consensus 277 ~--------------~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~~~~~~~ 330 (331)
T 1odm_A 277 A--------------ERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVSLINKNGQ 330 (331)
T ss_dssp S--------------CEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHHHHHHHCC
T ss_pred C--------------CEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHHHHHHHHHhcCC
Confidence 2 8999999999999999999999998877 8999999999999999988776654
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.3e-67 Score=512.18 Aligned_cols=284 Identities=17% Similarity=0.198 Sum_probs=241.7
Q ss_pred CCCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHhhCCCHhhhhhhccCCCCC
Q 017340 1 MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHY 80 (373)
Q Consensus 1 ~~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~fF~lP~e~K~~~~~~~~~~ 80 (373)
++||||||+.+.. ++|.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++..+
T Consensus 2 ~~iPvIDls~l~~-------~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---- 70 (319)
T 1w9y_A 2 ENFPIISLDKVNG-------VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---- 70 (319)
T ss_dssp CCCCEEEGGGGGS-------TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred CCCCEEECcccCc-------ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----
Confidence 3599999998852 34688999999999999999999999999999999999999999999999998754
Q ss_pred ceecccCCcccCcCcchhHHHHHHhcCCCCCCCCCCCCCCCccccceecCCCCCCcccccCCCCCCCCCCChhhHHHHHH
Q 017340 81 QVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDS 160 (373)
Q Consensus 81 ~~GY~~~g~e~~~~~~d~~~~e~~~~~~~~~~~~~~~~~D~k~~~~~~~~~~p~~~~~~~~~~~n~wP~~~p~fr~~~~~ 160 (373)
.+||.+.+.|. ...| |+++|.++..|. ..+|.||+.+|+||+.+++
T Consensus 71 ~~Gy~~~~~e~-------------------------~~~d--~ke~~~~~~~p~-------~~~~~wP~~~~~fr~~~~~ 116 (319)
T 1w9y_A 71 SKALEGVQAEV-------------------------TDMD--WESTFFLKHLPI-------SNISEVPDLDEEYREVMRD 116 (319)
T ss_dssp HHHHTTCCCCG-------------------------GGCC--CCEEEEEEEESC-------CGGGGCTTCCHHHHHHHHH
T ss_pred CCCCCcccccC-------------------------CCCC--hhhheeeecCCc-------ccccccccchhHHHHHHHH
Confidence 36898765442 1245 446666654332 2367899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCChhHHhhhhcC---CCcccccCCCCCcCCCCCCceeeeccCCCCcEEEEecC-CCCce
Q 017340 161 WGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQ---GPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRS-RFPGL 236 (373)
Q Consensus 161 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~---~~~~lrp~~~~~~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GL 236 (373)
|++.|.+++..|+++|+++||+++++|.+.+.. ..+.||..+|++.. .++..+|+++|||+|+||||+|| .++||
T Consensus 117 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~-~~~~~~g~~~HtD~g~lTlL~qd~~v~GL 195 (319)
T 1w9y_A 117 FAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCP-KPDLIKGLRAHTDAGGIILLFQDDKVSGL 195 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEEEEEEECCCCS-CGGGGSSCCCBCCSSSEEEEEESSSCCCE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccceeEEEecCCCc-ccccccccccccCCCceEEEEecCCCCee
Confidence 999999999999999999999999999998874 34678888887543 23457899999999999999995 79999
Q ss_pred eEEecCCcEEEeecCCCeEEEEeCCCCchhHHHHHHhhccccchhhhhcCCceecccceeeccCcchhhhhhhhccCCCC
Q 017340 237 NIWLRNGKKVEVKVPVGCLLIQTGKQASWELFLVQFLADSGFCLIEWLTAGDCLAGMHEVIVTSRTIDAIKQASEHNRSL 316 (373)
Q Consensus 237 qV~~~~G~W~~V~~~~g~lvVniGd~~~~~~~~~~~~~~~~~~~l~~~TnG~~~st~HRV~~~~~~~~~~~~~~~~~~~~ 316 (373)
||+ ++|+|++|+|.||++||||||+ ||+||||+||||.|||++++..
T Consensus 196 QV~-~~g~Wi~V~p~pgalvVNiGD~------------------l~~~SnG~~kS~~HRVv~~~~~-------------- 242 (319)
T 1w9y_A 196 QLL-KDGQWIDVPPMRHSIVVNLGDQ------------------LEVITNGKYKSVMHRVIAQKDG-------------- 242 (319)
T ss_dssp EEE-ETTEEEECCCCTTCEEEEECHH------------------HHHHTTTSSCCCCEEECCCSSS--------------
T ss_pred eEe-eCCeEEEcccCCCcEEEEhHHH------------------HHHHhCCeeecccceecCCCCC--------------
Confidence 996 6899999999999999999999 9999999999999999987643
Q ss_pred ceeEEEEeeecCCCceeecCCcccCCC---CCCCCCCccHHHHHHHHHHH
Q 017340 317 WRVSSTLFAHIASDAVLKPLGHFAESP---LSRKYPPICAGEFVEQELAV 363 (373)
Q Consensus 317 ~R~Si~~F~~p~~d~~i~pl~~~~~~~---~~~~y~~it~~e~~~~~~~~ 363 (373)
+|||++||++|+.|++|.|++++++++ +|++|+++|++||+..+++.
T Consensus 243 ~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~ 292 (319)
T 1w9y_A 243 ARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGL 292 (319)
T ss_dssp CCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTT
T ss_pred CceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhh
Confidence 899999999999999999999999887 59999999999999887643
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2e-66 Score=502.31 Aligned_cols=292 Identities=18% Similarity=0.185 Sum_probs=235.7
Q ss_pred CCCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHhhCCC-HhhhhhhccCCCC
Q 017340 1 MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESP-FHFKRLQERPNLH 79 (373)
Q Consensus 1 ~~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~fF~lP-~e~K~~~~~~~~~ 79 (373)
++||||||+.+.+++ . .++|.+||+++|||||+||||+.++++++++++++||+|| .|+|+++......
T Consensus 3 ~~iPvIDls~l~~~~----~------~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~ 72 (311)
T 1dcs_A 3 TTVPTFSLAELQQGL----H------QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPT 72 (311)
T ss_dssp CCCCEEEHHHHHTTC----S------HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCC
T ss_pred CCCcEEEchhhcCCC----H------HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCC
Confidence 369999999986543 1 1289999999999999999999999999999999999999 9999999976555
Q ss_pred CceecccCCcccCcCcchhHHHHHHhcCCCCCCCCCCCCCCCccccceecCCCCCCcccccCCCCCCCCCCChhhHHHHH
Q 017340 80 YQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMD 159 (373)
Q Consensus 80 ~~~GY~~~g~e~~~~~~d~~~~e~~~~~~~~~~~~~~~~~D~k~~~~~~~~~~p~~~~~~~~~~~n~wP~~~p~fr~~~~ 159 (373)
.++||.+.+.|..+...+ ....+| |+|.|.++.. +|.|| +|+||+.++
T Consensus 73 ~~~Gy~~~~~e~~~~~~~-----------------~~~~~d--~~E~~~~~~~-----------~n~wP--~~~fr~~~~ 120 (311)
T 1dcs_A 73 MRRGFTGLESESTAQITN-----------------TGSYSD--YSMCYSMGTA-----------DNLFP--SGDFERIWT 120 (311)
T ss_dssp SSSEEEEC------------------------------------CEEEEECSS-----------SCCCS--CHHHHHHHH
T ss_pred CCCceeeccccccccccC-----------------CCCCCC--cceeeeccCC-----------CCCCC--ChHHHHHHH
Confidence 679999988765310000 002345 4467766642 57899 899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCC----ChhHHhhhhcCCCcccccCCCCCcCCC-CCC--ceeeeccCCCCcEEEEecC-
Q 017340 160 SWGHKMISAIEVVAEMAAIGFGL----PKDAFTSLMKQGPHLLAPTGCDLRRYG-KEG--TVFAGYHYDLNFLTIHGRS- 231 (373)
Q Consensus 160 ~y~~~~~~l~~~ll~~la~~Lgl----~~~~f~~~~~~~~~~lrp~~~~~~~~~-~~~--~~~~~~HtD~g~lTlL~qd- 231 (373)
+|++.|.+++..|+++|+++||+ ++++|.+. .+.||..+|++...+ ..+ .+|+++|||+|+||||+||
T Consensus 121 ~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~ 196 (311)
T 1dcs_A 121 QYFDRQYTASRAVAREVLRATGTEPDGGVEAFLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTP 196 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCC
Confidence 99999999999999999999999 88999876 567887777654322 113 6789999999999999999
Q ss_pred CCCc---eeEEecCCcEEEeecCCCeEEEEeCCCCchhHHHHHHhhccccchhhhhcCCceecccceeeccCcchhhhhh
Q 017340 232 RFPG---LNIWLRNGKKVEVKVPVGCLLIQTGKQASWELFLVQFLADSGFCLIEWLTAGDCLAGMHEVIVTSRTIDAIKQ 308 (373)
Q Consensus 232 ~~~G---LqV~~~~G~W~~V~~~~g~lvVniGd~~~~~~~~~~~~~~~~~~~l~~~TnG~~~st~HRV~~~~~~~~~~~~ 308 (373)
.++| |||++ +|+|++|+|+||++||||||+ ||+||||+||||+|||+.++..
T Consensus 197 ~v~G~~~LqV~~-~g~W~~V~p~pg~lvVNiGD~------------------l~~~TnG~~kS~~HRVv~~~~~------ 251 (311)
T 1dcs_A 197 CANGFVSLQAEV-GGAFTDLPYRPDAVLVFCGAI------------------ATLVTGGQVKAPRHHVAAPRRD------ 251 (311)
T ss_dssp CTTCCCCEEEEE-TTEEEECCCCTTCEEEEECHH------------------HHHHTTSCSCCCCEEECCC---------
T ss_pred CCCCceeEEEEe-CCEEEeCcCCCCeEEEEHHHH------------------HHHHhCCcccCCCceEeCCCcc------
Confidence 8999 99998 899999999999999999999 9999999999999999987621
Q ss_pred hhccCCCCceeEEEEeeecCCCceeecCCcccCCCCCCCC--CCccHHHHHHHHHHHHhhc
Q 017340 309 ASEHNRSLWRVSSTLFAHIASDAVLKPLGHFAESPLSRKY--PPICAGEFVEQELAVINLK 367 (373)
Q Consensus 309 ~~~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y--~~it~~e~~~~~~~~~~~~ 367 (373)
.....+||||+||++|+.|++|. +++++++++|++| +++|++||+..|++.++..
T Consensus 252 ---~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~~~ 308 (311)
T 1dcs_A 252 ---QIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIRRT 308 (311)
T ss_dssp ----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEECC
T ss_pred ---cCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHhcc
Confidence 01123899999999999999999 9999988899999 9999999999988776643
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=9e-64 Score=476.98 Aligned_cols=270 Identities=19% Similarity=0.200 Sum_probs=222.1
Q ss_pred CCCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHhhCCCHhhhhhhccCCCCC
Q 017340 1 MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHY 80 (373)
Q Consensus 1 ~~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~fF~lP~e~K~~~~~~~~~~ 80 (373)
|+||||||+.. +.+++|.+||++||||||+||||+.++++++++.+++||++ |+|+++.+.. ..
T Consensus 2 ~~IPvIDls~~-------------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~-~~ 65 (280)
T 3on7_A 2 MKLETIDYRAA-------------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR-ET 65 (280)
T ss_dssp --CCEEETTST-------------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT-TT
T ss_pred CCCCEEECCCh-------------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC-CC
Confidence 89999999852 24789999999999999999999999999999999999998 7899987654 34
Q ss_pred ceecccCC-cccCcCcchhHHHHHHhcCCCCCCCCCCCCCCCccccceecCCCCCCcccccCCCCCCCCCCChhhHHHHH
Q 017340 81 QVGVTPEG-VEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMD 159 (373)
Q Consensus 81 ~~GY~~~g-~e~~~~~~d~~~~e~~~~~~~~~~~~~~~~~D~k~~~~~~~~~~p~~~~~~~~~~~n~wP~~~p~fr~~~~ 159 (373)
++||.+.+ .|...+. ..+|.| |+|.+. .||..+|+||+.++
T Consensus 66 ~~GY~~~~~~e~~~~~---------------------~~~D~k--E~~~~~---------------p~~~~p~~fr~~~~ 107 (280)
T 3on7_A 66 HDGFFPASISETAKGH---------------------TVKDIK--EYYHVY---------------PWGRIPDSLRANIL 107 (280)
T ss_dssp CCEEECCC-----------------------------CCCCSC--EEEEEC---------------TTSCCCGGGHHHHH
T ss_pred CCccccCccccccCCC---------------------CcccHH--HHHhcC---------------CCCCCCHHHHHHHH
Confidence 69999876 4433210 235655 555542 26766789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCh--hH---HhhhhcCCC-cccccCCCCCcCCC-CCCceeeeccCCCCcEEEEecCC
Q 017340 160 SWGHKMISAIEVVAEMAAIGFGLPK--DA---FTSLMKQGP-HLLAPTGCDLRRYG-KEGTVFAGYHYDLNFLTIHGRSR 232 (373)
Q Consensus 160 ~y~~~~~~l~~~ll~~la~~Lgl~~--~~---f~~~~~~~~-~~lrp~~~~~~~~~-~~~~~~~~~HtD~g~lTlL~qd~ 232 (373)
+|+++|.+++.+|+++||++||++. ++ |.+++..+. +.||..+|++...+ ....+|+++|||+|+||||+||+
T Consensus 108 ~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~ 187 (280)
T 3on7_A 108 AYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTAN 187 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecC
Confidence 9999999999999999999999863 32 566666654 78887777654322 23579999999999999999999
Q ss_pred CCceeEEecCCcEEEeecCCCeEEEEeCCCCchhHHHHHHhhccccchhhhhcCCceecccceeeccCcchhhhhhhhcc
Q 017340 233 FPGLNIWLRNGKKVEVKVPVGCLLIQTGKQASWELFLVQFLADSGFCLIEWLTAGDCLAGMHEVIVTSRTIDAIKQASEH 312 (373)
Q Consensus 233 ~~GLqV~~~~G~W~~V~~~~g~lvVniGd~~~~~~~~~~~~~~~~~~~l~~~TnG~~~st~HRV~~~~~~~~~~~~~~~~ 312 (373)
++||||++++|+|++|+|.||++||||||+ ||+||||+||||+|||+.++..
T Consensus 188 ~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~------------------l~~~Tng~~kS~~HRVv~~~~~---------- 239 (280)
T 3on7_A 188 EPGLQVKAKDGSWLDVPSDFGNIIINIGDM------------------LQEASDGYFPSTSHRVINPEGT---------- 239 (280)
T ss_dssp CCCEEEECTTSCEEECCCCTTCEEEEECHH------------------HHHHTTTSSCCCCEEEECCTTC----------
T ss_pred CCCeEEEcCCCCEEECcCCCCEEEEEcChH------------------HHHHhCCcccCCCceEeCCCCC----------
Confidence 999999999999999999999999999999 9999999999999999987532
Q ss_pred CCCCceeEEEEeeecCCCceeecCCcccCCCCCCCCCCccHHHHHHHHHHHHhh
Q 017340 313 NRSLWRVSSTLFAHIASDAVLKPLGHFAESPLSRKYPPICAGEFVEQELAVINL 366 (373)
Q Consensus 313 ~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~y~~it~~e~~~~~~~~~~~ 366 (373)
+...+||||+||++|+.|++|.| +||++||+.+|++++++
T Consensus 240 ~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~~l 279 (280)
T 3on7_A 240 DKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLRELGV 279 (280)
T ss_dssp CTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHhcC
Confidence 12348999999999999999973 59999999999999876
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.35 E-value=1 Score=40.15 Aligned_cols=44 Identities=20% Similarity=0.067 Sum_probs=35.1
Q ss_pred CcEEEeecCCCeEEEEeCCCCchhHHHHHHhhccccchhhhhcCCceecccceeeccCcchhhhhhhhccCCCCceeEEE
Q 017340 243 GKKVEVKVPVGCLLIQTGKQASWELFLVQFLADSGFCLIEWLTAGDCLAGMHEVIVTSRTIDAIKQASEHNRSLWRVSST 322 (373)
Q Consensus 243 G~W~~V~~~~g~lvVniGd~~~~~~~~~~~~~~~~~~~l~~~TnG~~~st~HRV~~~~~~~~~~~~~~~~~~~~~R~Si~ 322 (373)
..++.|.|.+|.+||.-..+ .|+|...... .+|+||+
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------------------------~H~V~p~~~~-------------~~RiSIs 202 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------------------------RHEVPMNMAE-------------EDRISVS 202 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------------------------CEEECCCCSS-------------SCEEEEE
T ss_pred CCeeEecCCCCeEEEECCCC------------------------------EEeccCCCCC-------------CCEEEEE
Confidence 35779999999999999999 8999855432 2899999
Q ss_pred EeeecCC
Q 017340 323 LFAHIAS 329 (373)
Q Consensus 323 ~F~~p~~ 329 (373)
|.+.+..
T Consensus 203 FN~~~~~ 209 (216)
T 2rg4_A 203 FNYAWGE 209 (216)
T ss_dssp EEEEC--
T ss_pred EEeecCC
Confidence 9998764
No 8
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=85.90 E-value=1.8 Score=39.33 Aligned_cols=49 Identities=18% Similarity=0.260 Sum_probs=34.6
Q ss_pred CceeEEecCCcEEEeecCCCeEEEEeCCCCchhHHHHHHhhccccchhhhhcCCceecccceeeccCcchhhhhhhhccC
Q 017340 234 PGLNIWLRNGKKVEVKVPVGCLLIQTGKQASWELFLVQFLADSGFCLIEWLTAGDCLAGMHEVIVTSRTIDAIKQASEHN 313 (373)
Q Consensus 234 ~GLqV~~~~G~W~~V~~~~g~lvVniGd~~~~~~~~~~~~~~~~~~~l~~~TnG~~~st~HRV~~~~~~~~~~~~~~~~~ 313 (373)
|.|.+.+..+ -..|+|..|.+|+.-.++ +|+|..-..+
T Consensus 147 Getvf~~~~~-~~~V~P~~G~~v~F~s~~------------------------------lH~v~pV~~G----------- 184 (243)
T 3dkq_A 147 GELVIQDTYG-QQSIKLSAGSLVLYPSSS------------------------------LHQVTPVLSG----------- 184 (243)
T ss_dssp CCEEEEETTE-EEEECCCTTCEEEEETTS------------------------------EEEECCEEEE-----------
T ss_pred ceEEEeeCCC-cEEEecCCCEEEEECCCC------------------------------eEcCcccccc-----------
Confidence 4577765443 467999999888865444 8999743332
Q ss_pred CCCceeEEEEeeec
Q 017340 314 RSLWRVSSTLFAHI 327 (373)
Q Consensus 314 ~~~~R~Si~~F~~p 327 (373)
.|++++.+++-
T Consensus 185 ---~R~~~~~Wi~s 195 (243)
T 3dkq_A 185 ---ERTAAFMWLQS 195 (243)
T ss_dssp ---CEEEEEEEEEE
T ss_pred ---CEEEEEEehhh
Confidence 89999999864
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=73.12 E-value=6.7 Score=35.52 Aligned_cols=37 Identities=14% Similarity=0.088 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHh
Q 017340 25 ELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKY 62 (373)
Q Consensus 25 ~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~f 62 (373)
.....|..++.+.|++.|.|- ++.++++.+.+.++.+
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~ 50 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRAL 50 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhh
Confidence 345678899999999887654 8999999999988874
No 10
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=72.84 E-value=5.7 Score=37.99 Aligned_cols=47 Identities=23% Similarity=0.229 Sum_probs=34.9
Q ss_pred eeeccCCCC------cEEEEecCCCCceeEEecCCcEEEeecCCCeEEEEeCCC
Q 017340 215 FAGYHYDLN------FLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQ 262 (373)
Q Consensus 215 ~~~~HtD~g------~lTlL~qd~~~GLqV~~~~G~W~~V~~~~g~lvVniGd~ 262 (373)
++++|.|-. +.||-+.. ..=+.+..++|.++.+...+|.++|+-|++
T Consensus 210 ~I~~H~D~~~~~~~~I~slSLG~-~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~ 262 (345)
T 3tht_A 210 GIPAHIDTHSAFEDEIVSLSLGS-EIVMDFKHPDGIAVPVMLPRRSLLVMTGES 262 (345)
T ss_dssp CEEEECCCTTTBCSCEEEEEESS-CEEEEEECTTSCEEEEEECTTEEEEECTHH
T ss_pred CEeeccCCchhcCCeEEEEECCC-ceeEEEccCCCceEEEEcCCCcEEEEChHH
Confidence 889999973 33332222 234666656688999999999999999999
No 11
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=63.14 E-value=4.9 Score=38.88 Aligned_cols=52 Identities=12% Similarity=0.120 Sum_probs=39.5
Q ss_pred CCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHhhCC
Q 017340 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFES 65 (373)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~fF~l 65 (373)
++|.||++.+.+. .+...++.+|+.++|++.+.|-+++.+ ...+.+++|-.+
T Consensus 122 ~~~~~~~~~~l~~---------d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY---------DEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC---------HHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcC---------HHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 5788999887643 356788999999999999999998854 344556666444
No 12
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=62.54 E-value=4.8 Score=39.88 Aligned_cols=53 Identities=17% Similarity=0.240 Sum_probs=40.9
Q ss_pred CCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHhhCC
Q 017340 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFES 65 (373)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~fF~l 65 (373)
-||.|||+++.++. +.++..+.+++.|++.|+|+ ||.+......+...+|.+.
T Consensus 100 ~iP~i~f~di~~~~----------~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~~ 152 (461)
T 2dbn_A 100 VWPVLSYADIKAGH----------VTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLDR 152 (461)
T ss_dssp SSCEEEHHHHHHTC----------CCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHHH
T ss_pred CcceecHHHhcCCC----------CCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHHh
Confidence 48999999876543 23455678899999999987 8988888888888887643
No 13
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=60.84 E-value=17 Score=32.15 Aligned_cols=47 Identities=13% Similarity=0.059 Sum_probs=31.3
Q ss_pred eeeccCCC-----C--cEEEEecCCCCceeEEe--cCCcEEEeecCCCeEEEEeCCC
Q 017340 215 FAGYHYDL-----N--FLTIHGRSRFPGLNIWL--RNGKKVEVKVPVGCLLIQTGKQ 262 (373)
Q Consensus 215 ~~~~HtD~-----g--~lTlL~qd~~~GLqV~~--~~G~W~~V~~~~g~lvVniGd~ 262 (373)
++++|.|- + +.||-+.. ..=+.+.. +++..+.+...+|.++|.-|++
T Consensus 117 ~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~ 172 (211)
T 3i3q_A 117 KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES 172 (211)
T ss_dssp CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGG
T ss_pred CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchH
Confidence 89999992 2 23333322 12344432 2366899999999999999988
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=56.24 E-value=24 Score=31.64 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=18.4
Q ss_pred CcEEEeecCCCeEEEEeCCC
Q 017340 243 GKKVEVKVPVGCLLIQTGKQ 262 (373)
Q Consensus 243 G~W~~V~~~~g~lvVniGd~ 262 (373)
+..+.+...+|.++|+-|++
T Consensus 184 ~~~~~i~L~~gsllvM~G~~ 203 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGAT 203 (238)
T ss_dssp CCEEEEEECTTCEEEEEETH
T ss_pred CceEEEEcCCCCEEEEChhh
Confidence 36899999999999999999
No 15
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=56.08 E-value=26 Score=30.57 Aligned_cols=19 Identities=21% Similarity=0.312 Sum_probs=17.6
Q ss_pred cEEEeecCCCeEEEEeCCC
Q 017340 244 KKVEVKVPVGCLLIQTGKQ 262 (373)
Q Consensus 244 ~W~~V~~~~g~lvVniGd~ 262 (373)
..+.+...+|.++|+-|++
T Consensus 158 ~~~~~~L~~GsllvM~g~~ 176 (204)
T 3s57_A 158 AVVRLPLAHGSLLMMNHPT 176 (204)
T ss_dssp CCEEEEECTTEEEEEETTH
T ss_pred ceEEEECCCCCEEEECchh
Confidence 5789999999999999998
No 16
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=42.69 E-value=72 Score=28.02 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=15.0
Q ss_pred EEEcCCCChHHHHHHHHHHHH
Q 017340 41 LVKDPRCTVEDNDRFLDMMEK 61 (373)
Q Consensus 41 ~l~nhGi~~~~~~~~~~~a~~ 61 (373)
.+...=++++.++.+.+.++.
T Consensus 42 ~~~~~fLs~~Ec~~Li~~a~~ 62 (216)
T 3itq_A 42 VVLGNVLSDEECDELIELSKS 62 (216)
T ss_dssp EEEESCSCHHHHHHHHHHHHH
T ss_pred EEECCcCCHHHHHHHHHHhhc
Confidence 333344788889999888874
No 17
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=41.48 E-value=20 Score=31.37 Aligned_cols=50 Identities=22% Similarity=0.274 Sum_probs=34.6
Q ss_pred CCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCCh--HHHHHHHHHHHH
Q 017340 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTV--EDNDRFLDMMEK 61 (373)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~--~~~~~~~~~a~~ 61 (373)
.||++++.... + .++++.+.+++.+.-.+.|.|||+-. +.+++++..+..
T Consensus 125 ~v~~~~y~~~g--~--------~~la~~i~~~l~~~~avll~nHG~~~~G~t~~eA~~~~~~ 176 (212)
T 2opi_A 125 EIPVIPYYRPG--S--------PELAKAVVEAMLKHNSVLLTNHGQVVCGKDFDQVYERATF 176 (212)
T ss_dssp CCCEECCCCTT--C--------HHHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CeEEEcCCCCC--c--------HHHHHHHHHHhccCCEEEEcCCCcEEEcCCHHHHHHHHHH
Confidence 47888876431 2 46788899999988899999999532 345555554443
No 18
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=39.23 E-value=42 Score=29.28 Aligned_cols=26 Identities=8% Similarity=-0.003 Sum_probs=18.3
Q ss_pred hccEEEEEcCCCChHHHHHHHHHHHH
Q 017340 36 ETGALLVKDPRCTVEDNDRFLDMMEK 61 (373)
Q Consensus 36 ~~Gff~l~nhGi~~~~~~~~~~~a~~ 61 (373)
..-++.+...=++.+.++.+.+.++.
T Consensus 18 ~~P~i~~~~~fLs~~Ec~~li~~~~~ 43 (224)
T 2jig_A 18 WSPRAFLLKNFLSDEECDYIVEKARP 43 (224)
T ss_dssp TTTTEEEETTCSCHHHHHHHHHHHGG
T ss_pred CCCCEEEEcccCCHHHHHHHHHHhhc
Confidence 33455566556788999999888864
No 19
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=35.92 E-value=30 Score=31.31 Aligned_cols=36 Identities=6% Similarity=0.126 Sum_probs=27.6
Q ss_pred HHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHhh
Q 017340 25 ELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYF 63 (373)
Q Consensus 25 ~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~fF 63 (373)
+..++|.+++.++|++.+.+-.++.+ ...+.++.|=
T Consensus 30 ~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G 65 (283)
T 1otj_A 30 NQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFG 65 (283)
T ss_dssp HHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTS
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 45788999999999999999988764 3444556653
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=35.75 E-value=27 Score=30.57 Aligned_cols=50 Identities=18% Similarity=0.225 Sum_probs=34.1
Q ss_pred CCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCCh--HHHHHHHHHHHH
Q 017340 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTV--EDNDRFLDMMEK 61 (373)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~--~~~~~~~~~a~~ 61 (373)
.||++++...- + .++++.+.+++.+.-.+.|.|||+-. +.+++++..+..
T Consensus 122 ~ip~~~y~~~g--~--------~~la~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~~ 173 (215)
T 1e4c_P 122 SIPCAPYATFG--T--------RELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAHE 173 (215)
T ss_dssp CBCEECCCCTT--C--------HHHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CcceeeCCCCC--c--------HHHHHHHHHHhccCCEEEEcCCCcEEEeCCHHHHHHHHHH
Confidence 46777765421 1 46788899999888899999999532 445555555443
No 21
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=35.13 E-value=34 Score=29.66 Aligned_cols=38 Identities=24% Similarity=0.169 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhhhccEEEEEcCCCC--h------HHHHHHHHHHHH
Q 017340 24 SELCREVSGILRETGALLVKDPRCT--V------EDNDRFLDMMEK 61 (373)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~l~nhGi~--~------~~~~~~~~~a~~ 61 (373)
.++++.+.+++.+.-.+.|.|||+- - +.+++++..+..
T Consensus 130 ~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 130 EEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp HHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 4678888999988889999999942 2 456666665544
No 22
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=32.53 E-value=36 Score=30.24 Aligned_cols=50 Identities=16% Similarity=0.141 Sum_probs=34.8
Q ss_pred CCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCCh--HHHHHHHHHHHH
Q 017340 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTV--EDNDRFLDMMEK 61 (373)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~~--~~~~~~~~~a~~ 61 (373)
.||++++... ++ .++++++.+++.+.-.+.+.|||+-. +.+++++..+..
T Consensus 161 ~v~~~~y~~~--g~--------~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~~ 212 (238)
T 1pvt_A 161 GISVVEFEKP--GS--------VELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVEI 212 (238)
T ss_dssp CCEEECCCST--TC--------HHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHHH
T ss_pred CceEecCCCC--Cc--------HHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 3777777532 12 46788899999988999999999532 455566655544
No 23
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.30 E-value=20 Score=26.07 Aligned_cols=42 Identities=10% Similarity=0.184 Sum_probs=34.6
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHhhCCCChhHHhhhhc
Q 017340 151 FPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMK 192 (373)
Q Consensus 151 ~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~ 192 (373)
+.+.+..+++||..-.+-...-+..||..+||+.+...-.|.
T Consensus 13 ~k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 13 YKDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp STHHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 356788999999998888888899999999999987655543
No 24
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=31.60 E-value=59 Score=30.40 Aligned_cols=41 Identities=10% Similarity=0.183 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhhhccEEEEEcCCCC----hHHHHHHHHHHHHhhC
Q 017340 24 SELCREVSGILRETGALLVKDPRCT----VEDNDRFLDMMEKYFE 64 (373)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~l~nhGi~----~~~~~~~~~~a~~fF~ 64 (373)
+++.+++.+.++.-||+.=.+|||+ .+-+..+.+++++|++
T Consensus 304 e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 304 DKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4555666777778888877889875 4789999999999985
No 25
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=28.22 E-value=46 Score=30.39 Aligned_cols=37 Identities=5% Similarity=0.002 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhhccEEEEEcCC-CChHHHHHHHHHHHHhhC
Q 017340 25 ELCREVSGILRETGALLVKDPR-CTVEDNDRFLDMMEKYFE 64 (373)
Q Consensus 25 ~~~~~l~~A~~~~Gff~l~nhG-i~~~~~~~~~~~a~~fF~ 64 (373)
+..++|.+++.++|++.+.|-. ++. +...+.++.|=.
T Consensus 40 ~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 40 ATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp HHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 4578899999999999999988 875 445556666643
No 26
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=26.15 E-value=37 Score=30.94 Aligned_cols=38 Identities=5% Similarity=0.044 Sum_probs=28.4
Q ss_pred HHHHHHHHHHhhhccEEEEEcCCCCh--HHHHHHHHHHHH
Q 017340 24 SELCREVSGILRETGALLVKDPRCTV--EDNDRFLDMMEK 61 (373)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~l~nhGi~~--~~~~~~~~~a~~ 61 (373)
.++++.+.+++.+.-.+.+.|||+-. +.+++++..+..
T Consensus 191 ~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~e~ 230 (274)
T 2v9l_A 191 DAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLIDT 230 (274)
T ss_dssp HHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHHHH
Confidence 46888899999999999999999532 455566655544
No 27
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=23.45 E-value=54 Score=21.71 Aligned_cols=26 Identities=12% Similarity=0.202 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHhhCCCChhHHh
Q 017340 163 HKMISAIEVVAEMAAIGFGLPKDAFT 188 (373)
Q Consensus 163 ~~~~~l~~~ll~~la~~Lgl~~~~f~ 188 (373)
++-.+++..|.+++++.||.|++++.
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~~~v~ 42 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANRQAIH 42 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGGCE
T ss_pred HHHHHHHHHHHHHHHHHhCcCcccEE
Confidence 35677889999999999999987543
No 28
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=21.99 E-value=86 Score=28.38 Aligned_cols=38 Identities=13% Similarity=0.196 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhhccEEEEEcCCCChHHHHHHHHHHHHhhC
Q 017340 24 SELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFE 64 (373)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~l~nhGi~~~~~~~~~~~a~~fF~ 64 (373)
.+..++|.+|+.++|.+.+.|..++.+ +..+.++.|=.
T Consensus 27 ~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 27 AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 356788999999999999999988764 44456666643
No 29
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=21.72 E-value=48 Score=30.30 Aligned_cols=51 Identities=4% Similarity=0.017 Sum_probs=34.0
Q ss_pred CCcEEecCccccCCCCCCchhHHHHHHHHHHHhhhccEEEEEcCCCC--hHHHHHHHHHHHH
Q 017340 2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCT--VEDNDRFLDMMEK 61 (373)
Q Consensus 2 ~iPvIDl~~l~~~~~~~~~~~r~~~~~~l~~A~~~~Gff~l~nhGi~--~~~~~~~~~~a~~ 61 (373)
.||++|+..+.. + .++++.|.+++.+.-.+.|.|||+- -+.+++++..+..
T Consensus 156 ~v~~~~y~~~~~-~--------~el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~~ 208 (273)
T 3ocr_A 156 RVAYHGYEGIAL-D--------LSERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLHA 208 (273)
T ss_dssp TEEEECCCCSSC-C--------HHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CEEEECCCCCCC-C--------HHHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHHH
Confidence 367777664311 1 4667888889999999999999953 2445555555443
No 30
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=21.21 E-value=89 Score=20.86 Aligned_cols=24 Identities=25% Similarity=0.293 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHhhCCCChhHH
Q 017340 164 KMISAIEVVAEMAAIGFGLPKDAF 187 (373)
Q Consensus 164 ~~~~l~~~ll~~la~~Lgl~~~~f 187 (373)
+-.+++..|.+++++.||.++++.
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHHhCCCcccE
Confidence 456788899999999999998753
No 31
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=20.39 E-value=90 Score=28.72 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhhccEEEEEcC-CCChHHHHHHHHHHHHhhCC
Q 017340 24 SELCREVSGILRETGALLVKDP-RCTVEDNDRFLDMMEKYFES 65 (373)
Q Consensus 24 ~~~~~~l~~A~~~~Gff~l~nh-Gi~~~~~~~~~~~a~~fF~l 65 (373)
.+..++|.+|+.++|.+.+.|. .++.+ +..+.++.|=.+
T Consensus 33 d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 33 DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 3567889999999999999998 78764 445566666433
Done!