Query 017343
Match_columns 373
No_of_seqs 243 out of 2119
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 07:44:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017343.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017343hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06027 DUF914: Eukaryotic pr 100.0 1.1E-39 2.4E-44 293.3 30.3 305 4-308 2-314 (334)
2 KOG2766 Predicted membrane pro 100.0 7.4E-34 1.6E-38 235.8 9.8 301 3-307 6-307 (336)
3 PLN00411 nodulin MtN21 family 100.0 5E-31 1.1E-35 242.6 26.2 291 9-302 8-331 (358)
4 TIGR00817 tpt Tpt phosphate/ph 100.0 3.9E-30 8.5E-35 234.6 21.9 276 21-305 9-299 (302)
5 PRK11272 putative DMT superfam 100.0 8.9E-29 1.9E-33 224.3 26.4 282 9-302 3-288 (292)
6 PRK11689 aromatic amino acid e 100.0 1E-28 2.2E-33 224.1 25.2 278 14-301 4-289 (295)
7 PRK11453 O-acetylserine/cystei 100.0 2.5E-27 5.4E-32 215.5 27.6 274 17-302 7-290 (299)
8 PRK10532 threonine and homoser 100.0 4.3E-27 9.3E-32 213.3 27.3 275 11-302 9-284 (293)
9 PTZ00343 triose or hexose phos 100.0 6.9E-27 1.5E-31 216.2 25.6 280 12-300 47-349 (350)
10 TIGR00950 2A78 Carboxylate/Ami 100.0 8.7E-27 1.9E-31 208.3 24.7 257 26-295 1-260 (260)
11 PRK15430 putative chlorampheni 100.0 2.2E-26 4.7E-31 209.0 25.6 272 9-299 3-285 (296)
12 TIGR03340 phn_DUF6 phosphonate 99.9 6.9E-24 1.5E-28 191.3 19.6 268 16-296 3-280 (281)
13 PF08449 UAA: UAA transporter 99.9 1.9E-22 4E-27 183.8 26.1 280 25-304 11-302 (303)
14 COG0697 RhaT Permeases of the 99.9 1.5E-21 3.3E-26 177.2 26.4 280 10-300 3-288 (292)
15 KOG1441 Glucose-6-phosphate/ph 99.9 6.8E-23 1.5E-27 182.3 16.4 278 19-305 22-313 (316)
16 KOG4510 Permease of the drug/m 99.9 4.8E-25 1E-29 184.7 1.4 284 11-301 35-327 (346)
17 TIGR00688 rarD rarD protein. T 99.9 1.8E-21 3.8E-26 173.4 22.4 242 14-274 2-255 (256)
18 KOG2765 Predicted membrane pro 99.9 3.2E-21 7E-26 169.6 22.1 223 77-303 162-394 (416)
19 COG5006 rhtA Threonine/homoser 99.9 1.3E-19 2.9E-24 151.3 24.4 264 24-304 22-287 (292)
20 TIGR00776 RhaT RhaT L-rhamnose 99.8 2.1E-18 4.5E-23 155.7 22.3 271 15-299 2-288 (290)
21 COG2962 RarD Predicted permeas 99.8 1.8E-18 3.8E-23 148.6 20.5 271 10-301 3-285 (293)
22 KOG2234 Predicted UDP-galactos 99.8 2.9E-17 6.2E-22 145.2 26.1 286 14-303 15-326 (345)
23 KOG1443 Predicted integral mem 99.8 5.5E-18 1.2E-22 145.4 19.8 285 5-298 7-314 (349)
24 KOG1581 UDP-galactose transpor 99.8 2.7E-17 5.9E-22 141.3 22.1 264 40-304 47-318 (327)
25 KOG3912 Predicted integral mem 99.8 8.6E-18 1.9E-22 142.3 17.1 260 40-299 35-334 (372)
26 PF04142 Nuc_sug_transp: Nucle 99.8 7.1E-17 1.5E-21 141.0 19.0 218 69-290 12-244 (244)
27 KOG1580 UDP-galactose transpor 99.7 2.9E-17 6.3E-22 135.6 11.2 257 45-302 54-316 (337)
28 KOG1444 Nucleotide-sugar trans 99.6 2.1E-14 4.6E-19 125.4 18.5 291 8-307 6-308 (314)
29 KOG1582 UDP-galactose transpor 99.6 1.7E-14 3.6E-19 122.0 13.2 273 24-301 53-334 (367)
30 KOG1583 UDP-N-acetylglucosamin 99.5 1.5E-14 3.3E-19 122.6 8.3 274 27-300 16-315 (330)
31 COG5070 VRG4 Nucleotide-sugar 99.5 2.3E-13 5E-18 111.9 10.3 264 40-304 33-301 (309)
32 COG2510 Predicted membrane pro 99.5 5.1E-13 1.1E-17 100.3 10.1 129 16-146 5-139 (140)
33 KOG1442 GDP-fucose transporter 99.5 1.9E-14 4.1E-19 121.8 2.4 268 30-302 44-330 (347)
34 KOG4314 Predicted carbohydrate 99.4 1.9E-12 4E-17 104.6 12.5 217 79-301 58-278 (290)
35 PF03151 TPT: Triose-phosphate 99.4 3.2E-11 6.9E-16 98.6 15.9 137 163-299 1-153 (153)
36 COG2510 Predicted membrane pro 99.4 2.8E-11 6.1E-16 91.0 12.7 136 163-299 4-139 (140)
37 PF06800 Sugar_transport: Suga 99.3 2.4E-10 5.2E-15 99.6 18.6 244 43-296 11-268 (269)
38 PF00892 EamA: EamA-like trans 99.2 1.2E-10 2.7E-15 91.5 10.1 125 172-298 1-125 (126)
39 PF00892 EamA: EamA-like trans 99.2 1.8E-11 3.8E-16 96.4 4.3 119 24-145 1-125 (126)
40 PF13536 EmrE: Multidrug resis 99.2 4E-11 8.6E-16 92.6 5.7 100 49-149 2-109 (113)
41 TIGR00803 nst UDP-galactose tr 99.2 3.8E-10 8.2E-15 98.2 11.6 200 92-297 17-222 (222)
42 TIGR00950 2A78 Carboxylate/Ami 99.0 2.2E-09 4.7E-14 95.8 11.4 132 11-142 125-260 (260)
43 PF05653 Mg_trans_NIPA: Magnes 99.0 1.5E-08 3.2E-13 91.4 14.3 269 10-301 3-294 (300)
44 PRK15430 putative chlorampheni 98.9 3.9E-08 8.5E-13 89.4 15.6 139 159-298 5-144 (296)
45 TIGR00688 rarD rarD protein. T 98.9 9.5E-08 2.1E-12 85.1 15.8 136 162-298 2-141 (256)
46 TIGR03340 phn_DUF6 phosphonate 98.8 9.9E-08 2.1E-12 86.2 15.2 132 164-299 3-135 (281)
47 PLN00411 nodulin MtN21 family 98.7 1.1E-07 2.4E-12 88.2 10.6 135 13-148 188-330 (358)
48 COG4975 GlcU Putative glucose 98.7 6.2E-10 1.4E-14 93.4 -4.4 272 14-298 2-284 (288)
49 PRK11689 aromatic amino acid e 98.7 1E-06 2.2E-11 80.2 16.0 133 162-300 4-138 (295)
50 PRK10532 threonine and homoser 98.7 2.2E-07 4.9E-12 84.3 11.1 133 13-148 147-283 (293)
51 PRK11272 putative DMT superfam 98.6 1.5E-07 3.3E-12 85.4 9.3 132 13-147 149-286 (292)
52 KOG2922 Uncharacterized conser 98.6 8.4E-07 1.8E-11 78.0 12.9 215 84-301 74-308 (335)
53 PRK02971 4-amino-4-deoxy-L-ara 98.6 2.4E-06 5.1E-11 66.9 13.9 122 162-302 2-125 (129)
54 PRK13499 rhamnose-proton sympo 98.6 1.1E-05 2.4E-10 73.6 20.1 284 11-300 4-342 (345)
55 PF03151 TPT: Triose-phosphate 98.5 9.7E-07 2.1E-11 72.0 10.2 130 15-144 1-151 (153)
56 PRK11453 O-acetylserine/cystei 98.5 1.3E-06 2.7E-11 79.7 10.9 136 13-148 142-289 (299)
57 PTZ00343 triose or hexose phos 98.5 1.3E-05 2.8E-10 74.6 17.3 134 165-299 52-186 (350)
58 PRK15051 4-amino-4-deoxy-L-ara 98.3 6.5E-07 1.4E-11 68.4 3.5 64 83-146 45-109 (111)
59 PF13536 EmrE: Multidrug resis 98.2 2.3E-05 5E-10 60.3 11.0 59 243-302 51-109 (113)
60 TIGR00817 tpt Tpt phosphate/ph 98.2 6.1E-05 1.3E-09 68.8 15.6 123 173-298 13-136 (302)
61 TIGR00776 RhaT RhaT L-rhamnose 98.2 7.7E-06 1.7E-10 74.0 9.5 131 12-146 150-288 (290)
62 COG2962 RarD Predicted permeas 98.2 5.1E-05 1.1E-09 66.3 13.7 138 161-299 6-144 (293)
63 PRK15051 4-amino-4-deoxy-L-ara 98.2 8.6E-05 1.9E-09 56.7 13.0 60 239-298 49-108 (111)
64 PRK10452 multidrug efflux syst 98.1 8.2E-05 1.8E-09 57.2 11.8 56 246-301 49-105 (120)
65 PF04657 DUF606: Protein of un 98.0 0.00055 1.2E-08 54.4 14.8 131 163-296 2-138 (138)
66 PRK02971 4-amino-4-deoxy-L-ara 98.0 4.8E-05 1E-09 59.6 8.5 118 15-148 3-124 (129)
67 COG0697 RhaT Permeases of the 98.0 0.00069 1.5E-08 61.1 17.4 140 161-303 6-147 (292)
68 PF06027 DUF914: Eukaryotic pr 97.8 0.0011 2.5E-08 60.6 15.1 139 162-302 13-154 (334)
69 PRK09541 emrE multidrug efflux 97.8 0.00075 1.6E-08 51.2 11.6 54 248-301 51-105 (110)
70 COG3238 Uncharacterized protei 97.7 0.0019 4.1E-08 51.3 13.3 137 161-299 4-146 (150)
71 PF08449 UAA: UAA transporter 97.7 0.00035 7.6E-09 63.8 10.1 132 15-146 155-297 (303)
72 COG5006 rhtA Threonine/homoser 97.6 0.00033 7.1E-09 59.9 8.8 130 15-146 149-282 (292)
73 PRK10650 multidrug efflux syst 97.6 0.0027 5.9E-08 47.9 12.1 54 245-298 53-107 (109)
74 KOG4510 Permease of the drug/m 97.6 7.4E-05 1.6E-09 64.2 3.7 134 159-301 35-171 (346)
75 PRK11431 multidrug efflux syst 97.5 0.0027 5.9E-08 47.6 11.1 53 247-299 49-102 (105)
76 PF10639 UPF0546: Uncharacteri 97.5 0.0004 8.6E-09 52.5 6.3 107 21-144 3-112 (113)
77 COG2076 EmrE Membrane transpor 97.5 0.0037 8.1E-08 46.5 11.1 55 246-300 49-104 (106)
78 PRK10452 multidrug efflux syst 97.4 0.00017 3.6E-09 55.5 3.4 67 82-148 38-105 (120)
79 PF06800 Sugar_transport: Suga 97.4 0.0014 3.1E-08 57.6 9.6 128 10-142 134-267 (269)
80 PF05653 Mg_trans_NIPA: Magnes 97.3 0.0016 3.5E-08 59.0 9.6 119 159-299 4-122 (300)
81 PF04142 Nuc_sug_transp: Nucle 97.3 0.0027 5.9E-08 55.8 10.4 74 231-304 21-94 (244)
82 PRK10650 multidrug efflux syst 97.2 0.0017 3.7E-08 49.0 7.1 67 78-144 39-106 (109)
83 PF07857 DUF1632: CEO family ( 97.1 0.0051 1.1E-07 53.9 10.4 131 163-303 1-138 (254)
84 PRK11431 multidrug efflux syst 97.1 0.00055 1.2E-08 51.4 3.7 63 84-146 39-102 (105)
85 PRK09541 emrE multidrug efflux 97.1 0.00049 1.1E-08 52.2 3.3 60 87-146 43-103 (110)
86 PF04657 DUF606: Protein of un 97.1 0.005 1.1E-07 48.9 9.2 125 17-143 4-138 (138)
87 COG2076 EmrE Membrane transpor 97.0 0.00064 1.4E-08 50.5 3.0 65 82-146 38-103 (106)
88 KOG1581 UDP-galactose transpor 96.9 0.0046 1E-07 54.5 7.8 135 10-144 168-311 (327)
89 PF00893 Multi_Drug_Res: Small 96.7 0.028 6E-07 41.4 9.8 46 245-290 47-93 (93)
90 TIGR00803 nst UDP-galactose tr 96.7 0.012 2.7E-07 51.0 9.0 67 77-143 155-221 (222)
91 PF00893 Multi_Drug_Res: Small 96.4 0.016 3.5E-07 42.6 7.1 51 86-136 41-92 (93)
92 PF06379 RhaT: L-rhamnose-prot 96.4 0.78 1.7E-05 41.8 20.6 166 13-182 6-193 (344)
93 PF10639 UPF0546: Uncharacteri 96.2 0.038 8.3E-07 41.9 8.0 109 169-297 3-112 (113)
94 KOG1580 UDP-galactose transpor 96.0 0.016 3.6E-07 49.1 5.9 78 69-146 236-313 (337)
95 KOG1441 Glucose-6-phosphate/ph 96.0 0.0093 2E-07 54.0 4.6 134 13-146 162-307 (316)
96 PRK13499 rhamnose-proton sympo 96.0 0.092 2E-06 48.3 11.0 139 159-300 4-154 (345)
97 KOG2765 Predicted membrane pro 95.9 0.035 7.6E-07 50.5 7.5 142 7-149 240-393 (416)
98 KOG1442 GDP-fucose transporter 95.6 0.025 5.4E-07 49.2 5.3 135 12-146 183-327 (347)
99 KOG2234 Predicted UDP-galactos 95.4 1 2.3E-05 41.0 15.1 136 164-299 17-164 (345)
100 KOG4831 Unnamed protein [Funct 94.2 0.69 1.5E-05 34.1 8.8 112 19-145 8-124 (125)
101 COG4975 GlcU Putative glucose 94.1 0.033 7.1E-07 47.7 2.1 135 163-305 3-142 (288)
102 COG3238 Uncharacterized protei 93.5 0.38 8.3E-06 38.4 7.1 130 15-145 6-145 (150)
103 KOG1444 Nucleotide-sugar trans 92.6 0.43 9.4E-06 42.8 6.8 105 43-147 186-301 (314)
104 KOG1582 UDP-galactose transpor 91.9 0.31 6.8E-06 42.5 4.9 124 26-149 202-335 (367)
105 KOG2922 Uncharacterized conser 91.5 0.15 3.3E-06 45.6 2.8 121 157-299 16-136 (335)
106 PF07857 DUF1632: CEO family ( 91.2 0.63 1.4E-05 40.9 6.2 126 16-146 2-134 (254)
107 KOG4314 Predicted carbohydrate 90.3 0.65 1.4E-05 38.6 5.1 59 245-303 71-129 (290)
108 PRK02237 hypothetical protein; 90.1 3 6.5E-05 31.1 7.9 41 262-302 68-108 (109)
109 KOG1443 Predicted integral mem 89.4 1.6 3.4E-05 39.1 7.0 133 12-144 162-313 (349)
110 PF02694 UPF0060: Uncharacteri 89.2 2.7 5.8E-05 31.3 7.1 41 262-302 66-106 (107)
111 KOG3912 Predicted integral mem 87.6 6.9 0.00015 34.7 9.7 56 245-300 104-159 (372)
112 PF06379 RhaT: L-rhamnose-prot 85.2 13 0.00028 34.1 10.6 136 159-301 4-155 (344)
113 PF04342 DUF486: Protein of un 82.6 2.6 5.6E-05 31.2 4.2 32 267-298 76-107 (108)
114 COG1742 Uncharacterized conser 82.4 3.1 6.7E-05 30.7 4.5 39 110-148 68-106 (109)
115 PF05297 Herpes_LMP1: Herpesvi 81.4 0.47 1E-05 41.6 0.0 76 92-173 41-118 (381)
116 KOG1583 UDP-N-acetylglucosamin 81.2 2.4 5.1E-05 37.4 4.2 134 9-146 159-314 (330)
117 COG5070 VRG4 Nucleotide-sugar 80.7 1.9 4.2E-05 36.7 3.3 96 44-139 185-289 (309)
118 PRK13108 prolipoprotein diacyl 79.9 21 0.00045 34.5 10.4 23 279-301 254-276 (460)
119 PRK02237 hypothetical protein; 79.1 12 0.00025 28.1 6.6 38 109-146 68-105 (109)
120 PF02694 UPF0060: Uncharacteri 77.2 11 0.00023 28.1 6.0 40 108-147 65-104 (107)
121 COG1742 Uncharacterized conser 75.9 24 0.00052 26.2 7.3 39 264-302 69-107 (109)
122 PF04342 DUF486: Protein of un 74.8 13 0.00027 27.7 5.7 52 93-144 54-106 (108)
123 PF05977 MFS_3: Transmembrane 74.0 64 0.0014 32.0 12.4 40 258-297 351-391 (524)
124 COG3169 Uncharacterized protei 73.5 33 0.00072 25.1 10.5 35 264-298 80-114 (116)
125 PF07168 Ureide_permease: Urei 66.1 0.56 1.2E-05 41.8 -3.3 130 168-298 2-145 (336)
126 PRK09776 putative diguanylate 60.4 1.5E+02 0.0033 32.2 13.2 24 163-186 71-94 (1092)
127 TIGR02865 spore_II_E stage II 60.2 80 0.0017 32.9 10.3 45 100-144 10-54 (764)
128 KOG2766 Predicted membrane pro 59.2 2.7 5.9E-05 36.6 -0.3 54 248-301 99-152 (336)
129 PRK06638 NADH:ubiquinone oxido 57.9 74 0.0016 26.9 8.1 31 269-299 134-166 (198)
130 KOG4831 Unnamed protein [Funct 56.8 15 0.00033 27.2 3.2 38 260-297 86-123 (125)
131 PF06570 DUF1129: Protein of u 55.9 1.3E+02 0.0028 25.6 11.7 33 69-101 141-173 (206)
132 COG4858 Uncharacterized membra 55.5 84 0.0018 26.1 7.5 48 68-118 155-202 (226)
133 PF15325 MRI: Modulator of ret 54.3 32 0.0007 25.0 4.4 8 290-297 13-20 (106)
134 COG3169 Uncharacterized protei 51.9 59 0.0013 23.8 5.5 32 113-144 82-113 (116)
135 PF08507 COPI_assoc: COPI asso 51.9 1.2E+02 0.0025 23.9 9.5 15 283-297 89-103 (136)
136 PF02535 Zip: ZIP Zinc transpo 51.0 1.9E+02 0.0041 26.1 13.2 45 162-206 6-51 (317)
137 KOG2927 Membrane component of 49.7 1.1E+02 0.0024 28.2 8.1 21 269-289 244-270 (372)
138 PRK11715 inner membrane protei 44.4 3E+02 0.0065 26.6 12.6 40 162-204 306-345 (436)
139 PF06123 CreD: Inner membrane 42.2 3.2E+02 0.007 26.3 11.2 32 98-129 398-429 (430)
140 PF06123 CreD: Inner membrane 40.0 3.5E+02 0.0076 26.1 13.1 38 162-202 300-337 (430)
141 TIGR00939 2a57 Equilibrative N 37.4 3.9E+02 0.0084 25.8 10.6 15 284-298 179-193 (437)
142 PF10225 DUF2215: Uncharacteri 36.9 2.1E+02 0.0045 25.2 7.9 12 137-148 17-28 (249)
143 KOG4434 Molecular chaperone SE 35.6 8.8 0.00019 35.2 -0.9 13 359-371 367-379 (520)
144 PF09656 PGPGW: Putative trans 35.5 28 0.00061 22.4 1.6 44 130-186 5-48 (53)
145 PF15345 TMEM51: Transmembrane 33.8 20 0.00044 30.8 1.0 19 285-303 67-85 (233)
146 COG4657 RnfA Predicted NADH:ub 32.9 89 0.0019 25.3 4.3 68 93-187 90-157 (193)
147 KOG2568 Predicted membrane pro 31.9 5.1E+02 0.011 25.6 18.8 23 286-308 427-449 (518)
148 PRK04214 rbn ribonuclease BN/u 31.8 4.6E+02 0.01 25.0 12.5 20 68-87 202-221 (412)
149 PRK11715 inner membrane protei 31.6 4.9E+02 0.011 25.2 11.0 32 98-129 404-435 (436)
150 PF15102 TMEM154: TMEM154 prot 31.2 48 0.001 26.4 2.6 17 285-301 67-83 (146)
151 PRK11902 ampG muropeptide tran 30.9 4.5E+02 0.0096 24.6 12.8 33 266-298 355-387 (402)
152 PRK12405 electron transport co 30.3 3.7E+02 0.008 23.4 13.3 119 12-132 35-158 (231)
153 PF11295 DUF3096: Protein of u 30.3 69 0.0015 19.1 2.5 33 264-296 1-33 (39)
154 PF05884 ZYG-11_interact: Inte 28.4 4.5E+02 0.0098 23.8 9.1 40 93-133 183-222 (299)
155 PF03631 Virul_fac_BrkB: Virul 27.9 4.1E+02 0.0089 23.2 12.4 14 46-59 160-173 (260)
156 PRK10435 cadB lysine/cadaverin 26.0 4.3E+02 0.0094 25.2 8.9 41 264-306 390-430 (435)
157 PF06570 DUF1129: Protein of u 25.5 2.1E+02 0.0045 24.3 5.9 17 71-87 177-193 (206)
158 COG2271 UhpC Sugar phosphate p 25.4 5.9E+02 0.013 24.6 9.1 42 260-302 166-208 (448)
159 TIGR00844 c_cpa1 na(+)/h(+) an 25.0 8.4E+02 0.018 25.8 17.2 13 68-80 93-105 (810)
160 PF09586 YfhO: Bacterial membr 25.0 7E+02 0.015 26.3 10.9 12 50-61 339-350 (843)
161 PRK10489 enterobactin exporter 24.7 5.8E+02 0.013 23.8 11.0 18 282-299 381-398 (417)
162 TIGR00910 2A0307_GadC glutamat 24.6 6.8E+02 0.015 24.6 10.7 15 190-204 331-345 (507)
163 PRK03554 tatA twin arginine tr 23.8 13 0.00027 26.7 -1.6 12 265-276 10-21 (89)
164 TIGR01167 LPXTG_anchor LPXTG-m 23.6 1.1E+02 0.0023 17.2 2.6 18 280-297 11-28 (34)
165 PF08627 CRT-like: CRT-like; 23.3 2.7E+02 0.0059 21.6 5.3 52 14-65 57-108 (130)
166 PF05684 DUF819: Protein of un 23.3 6.4E+02 0.014 23.8 9.6 41 171-211 64-104 (378)
167 TIGR02205 septum_zipA cell div 22.8 1.8E+02 0.0039 26.2 5.0 14 284-298 8-21 (284)
168 PF07698 7TM-7TMR_HD: 7TM rece 22.6 4.5E+02 0.0097 21.8 14.4 27 102-128 59-86 (194)
169 PLN00028 nitrate transmembrane 22.1 5.1E+02 0.011 25.0 8.7 13 284-296 417-429 (476)
170 COG3965 Predicted Co/Zn/Cd cat 22.1 5.7E+02 0.012 22.8 10.9 102 24-125 104-212 (314)
171 PF07444 Ycf66_N: Ycf66 protei 21.7 40 0.00086 24.1 0.6 24 278-301 4-27 (84)
172 TIGR03810 arg_ornith_anti argi 21.6 5.8E+02 0.013 24.7 8.9 21 282-302 412-432 (468)
173 PF15048 OSTbeta: Organic solu 21.0 31 0.00067 26.5 -0.1 28 272-299 25-56 (125)
174 PRK00269 zipA cell division pr 20.8 92 0.002 28.0 2.8 16 285-300 11-26 (293)
175 COG3086 RseC Positive regulato 20.5 78 0.0017 25.2 2.0 23 252-274 73-95 (150)
176 COG1971 Predicted membrane pro 20.5 1.3E+02 0.0029 25.1 3.5 45 254-298 41-86 (190)
177 PF07168 Ureide_permease: Urei 20.5 4.9E+02 0.011 23.8 7.1 20 160-179 130-149 (336)
178 PRK04570 cell division protein 20.4 2.8E+02 0.0062 24.1 5.4 15 288-302 16-30 (243)
179 PRK11010 ampG muropeptide tran 20.1 8.1E+02 0.018 23.8 13.2 20 280-299 382-401 (491)
180 PRK11089 PTS system glucose-sp 20.0 8.4E+02 0.018 23.9 9.6 27 71-97 351-378 (477)
No 1
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=100.00 E-value=1.1e-39 Score=293.33 Aligned_cols=305 Identities=54% Similarity=0.896 Sum_probs=279.8
Q ss_pred hhh-hHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc------ccCccchHH
Q 017343 4 FKE-FWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR------QPLKAKWYY 76 (373)
Q Consensus 4 ~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~------~~~~~~~~~ 76 (373)
.|. .++|+.++.+++|++++++.++++..++.+.+.+...|.+++++.+++..++..+...+|+ ...+++||+
T Consensus 2 ~~~~~~~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~ 81 (334)
T PF06027_consen 2 FKSFLFTRRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWK 81 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHH
Confidence 455 4899999999999999999999999999999988889999999999998888887766665 236788999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCC-
Q 017343 77 YLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG- 155 (373)
Q Consensus 77 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~- 155 (373)
+++++++...+|++.+.|++|++.+.++++..+..+++++++++++|+|+++.|++|++++++|++++...|...++++
T Consensus 82 y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~ 161 (334)
T PF06027_consen 82 YFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSS 161 (334)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999887654433
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHH
Q 017343 156 SGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYAL 235 (373)
Q Consensus 156 ~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (373)
.+.+...|++++++|+++||+++++.|+..++.|+..+.++..+++.++..+....+|..++...+|++.....+++..+
T Consensus 162 ~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~~~~~~~~v~~~~ 241 (334)
T PF06027_consen 162 SGSNPILGDLLALLGAILYAVSNVLEEKLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWTSQVIGLLVGYAL 241 (334)
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCChhhHHHHHHHHH
Confidence 56678999999999999999999999999999999999999999999999998888998888888898887788889999
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCCCcc
Q 017343 236 AMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQPC 308 (373)
Q Consensus 236 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~~ 308 (373)
+.+.+|...+.+++..+|+..++...+..+++++++++++|+++++..++|.++|++|.++|+..+++.++++
T Consensus 242 ~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~ 314 (334)
T PF06027_consen 242 CLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEAR 314 (334)
T ss_pred HHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999998776554444
No 2
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=100.00 E-value=7.4e-34 Score=235.80 Aligned_cols=301 Identities=67% Similarity=1.155 Sum_probs=274.1
Q ss_pred chhhhH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHH
Q 017343 3 SFKEFW-TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILG 81 (373)
Q Consensus 3 ~~~~~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g 81 (373)
+.++++ +|+.++++.+|+.+++|.++....++.++.++.+.|..++|..+.+-+++..+++.+|++..+..|+++++++
T Consensus 6 ~~~eik~tkk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~~~~~~~~~hYilla 85 (336)
T KOG2766|consen 6 NFNEIKSTKKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRRKYIKAKWRHYILLA 85 (336)
T ss_pred hHHHhhhchhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhhHHHHHHHHHhhhee
Confidence 344444 8999999999999999999999999999998899999999999999999999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCc
Q 017343 82 LIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPR 161 (373)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~ 161 (373)
+...-+|++...|+||++.+.++++-.-..+.+.+++|+++|.|.++.++.|+++|++|++++..+|.+.++..++.++.
T Consensus 86 ~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~ 165 (336)
T KOG2766|consen 86 FVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPV 165 (336)
T ss_pred EEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888889999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (373)
.|+++.++++-+||..++..+.+.|+.|..+++....++|+++..+- .+++.......+|++. ...++.+.++++++|
T Consensus 166 ~GD~lvi~GATlYaVSNv~EEflvkn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w~~~-i~~yl~f~L~MFllY 243 (336)
T KOG2766|consen 166 KGDFLVIAGATLYAVSNVSEEFLVKNADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHWDSA-IFLYLRFALTMFLLY 243 (336)
T ss_pred cCcEEEEecceeeeeccccHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEeehHH-HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999777 6777777777778744 344555889999999
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCCCc
Q 017343 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQP 307 (373)
Q Consensus 242 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~ 307 (373)
...+.+++..+++..++...++-.+++++ ..||-+.+|...+..+.+..|.++|..+++.+++.
T Consensus 244 sl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~~~~e~ 307 (336)
T KOG2766|consen 244 SLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREKDEEEL 307 (336)
T ss_pred HhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccccCcHhh
Confidence 99999999999999999999999999988 56888899999999999999999997655544333
No 3
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=5e-31 Score=242.63 Aligned_cols=291 Identities=14% Similarity=0.124 Sum_probs=222.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---ccC---ccchHHHHHHHH
Q 017343 9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPL---KAKWYYYLILGL 82 (373)
Q Consensus 9 ~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---~~~---~~~~~~~~~~g~ 82 (373)
+||+.+.++.++.+=++.+....++|...+.+ .+|..+.++|+.+++++++++.+.++ +.+ ++.+..+.+.|+
T Consensus 8 ~~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G-~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~ 86 (358)
T PLN00411 8 WRREAVFLTAMLATETSVVGISTLFKVATSKG-LNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGF 86 (358)
T ss_pred hhhccchHHHHHHHHHHHHHHHHHHHHHHHCC-CCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHH
Confidence 45577888888888899999999999998755 46788999999999999988865432 222 334456777788
Q ss_pred HHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHH------hccccceeeeehhhhheecceeeeeccCccC----
Q 017343 83 IDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIF------LKTKYRYKKITGVVVCVAGLVTVIFSDVHAG---- 152 (373)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~------l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~---- 152 (373)
++...+.+++.|++|+++++++++.++.|+++.++++++ +|||+++++++|++++++|+.++...+....
T Consensus 87 ~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~ 166 (358)
T PLN00411 87 LGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVAS 166 (358)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 774446688999999999999999999999999999999 6999999999999999999998775322100
Q ss_pred -------------CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccCChh-HHHHHHHHHHHHHHHHHHHHhhccccc
Q 017343 153 -------------DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRI-ELMAFLGLFGGIISAVQISILERKELQ 218 (373)
Q Consensus 153 -------------~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (373)
......+...|++++++++++|++|++++|+..++.++. ..+++++.++.+...+.....+..+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~ 246 (358)
T PLN00411 167 SPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS 246 (358)
T ss_pred ccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 000112224699999999999999999999998887654 566777777777665655554432211
Q ss_pred c--ccccccch-hHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhh
Q 017343 219 S--IHWSAGAA-LPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLI 295 (373)
Q Consensus 219 ~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~ 295 (373)
. ..++...+ ..+.+. .+. +.|....+.+++.++..+++..+++|+++++++++++||++++.+++|+++|+.|++
T Consensus 247 ~~~~~~~~~~~~i~y~~i-~t~-lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~ 324 (358)
T PLN00411 247 VWIIHFDITLITIVTMAI-ITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFY 324 (358)
T ss_pred cceeccchHHHHHHHHHH-HHH-HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHH
Confidence 1 11222221 222232 222 344566677799999999999999999999999999999999999999999999999
Q ss_pred eeecCCC
Q 017343 296 IYSGGDK 302 (373)
Q Consensus 296 l~~~~~~ 302 (373)
+..+.++
T Consensus 325 l~~~~~~ 331 (358)
T PLN00411 325 AVMWGKA 331 (358)
T ss_pred HHHhhhh
Confidence 9876443
No 4
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=3.9e-30 Score=234.59 Aligned_cols=276 Identities=9% Similarity=0.071 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHH--hc--ccCccchHHHHHHHHHHHHHHHHHHHHHh
Q 017343 21 FLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY--RR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQ 96 (373)
Q Consensus 21 ~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~--~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~ 96 (373)
.+-++.......+|+..+ .+.+|..++++|+.++.+.+.+.... ++ +..+++++..+..|+++.....+.+.+++
T Consensus 9 ~w~~~~~~~~~~NK~~l~-~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~ 87 (302)
T TIGR00817 9 LWYFLNVYFNIYNKKLLN-VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVTSNVSLS 87 (302)
T ss_pred HHHHHHHHHHHHHHHHHh-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444556666665 46789999999999988776655211 11 34566788889999998666889999999
Q ss_pred ccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHH
Q 017343 97 YTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAV 176 (373)
Q Consensus 97 ~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~ 176 (373)
|+++++++++.++.|+++++++++++|||++++++++++++++|+++....+ ......|++++++++++|++
T Consensus 88 ~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~a~~~~a~ 159 (302)
T TIGR00817 88 KVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE--------LSFNWAGFLSAMISNITFVS 159 (302)
T ss_pred hccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc--------ccccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998764321 22235799999999999999
Q ss_pred HHHHHHHHhc--cCChhHHHHHHHHHHHHHHHHHHHHhhccccccccc-------cccchh--HHHHHHHHHHHHHHHHH
Q 017343 177 SNVSEEFLVK--KADRIELMAFLGLFGGIISAVQISILERKELQSIHW-------SAGAAL--PFFGYALAMFLFYSFVP 245 (373)
Q Consensus 177 ~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~ 245 (373)
+.++.||..+ +.|+...+.++...+.+.+.|.....++.+....++ ...... .+.....+...+|....
T Consensus 160 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (302)
T TIGR00817 160 RNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAF 239 (302)
T ss_pred HHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888 789999999999999988888776555432111111 111111 11222224445555555
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCC
Q 017343 246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDD 305 (373)
Q Consensus 246 ~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~ 305 (373)
..+++.++.+.++..+++|+++++++++++||+++..+++|+++++.|++++++.+++++
T Consensus 240 ~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~ 299 (302)
T TIGR00817 240 MLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP 299 (302)
T ss_pred HHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence 678999999999999999999999999999999999999999999999999987654433
No 5
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.97 E-value=8.9e-29 Score=224.29 Aligned_cols=282 Identities=16% Similarity=0.122 Sum_probs=213.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc--ccCccchHHHHHHHHHHHH
Q 017343 9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVE 86 (373)
Q Consensus 9 ~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~ 86 (373)
.|+-+...+......++|++++...|...+ ..+|..++++|+.++.++++++...++ ...++++......|.++..
T Consensus 3 ~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~--~~~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 80 (292)
T PRK11272 3 FRQLLPLFGALFALYIIWGSTYLVIRIGVE--SWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLA 80 (292)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHH
Confidence 455555666777888999999999998764 678999999999999999888766554 2345566677777877654
Q ss_pred H-HHHHHHHH-hccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhh
Q 017343 87 G-NFLVVKAY-QYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGD 164 (373)
Q Consensus 87 ~-~~~~~~al-~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~ 164 (373)
. +.+++.+. ++++++.++++.++.|+++++++++ +|||++++++++++++++|+.++..++. ......|+
T Consensus 81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-------~~~~~~G~ 152 (292)
T PRK11272 81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-------LSGNPWGA 152 (292)
T ss_pred HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-------cccchHHH
Confidence 4 77778888 9999999999999999999999985 6999999999999999999998865321 11234799
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHH
Q 017343 165 ALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFV 244 (373)
Q Consensus 165 ~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (373)
+++++++++||.+.+..||..++ ++...+.++..++.+.+.+.....+.......+...+....+.+.. +....+...
T Consensus 153 l~~l~a~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~-~s~~~~~l~ 230 (292)
T PRK11272 153 ILILIASASWAFGSVWSSRLPLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVF-GSIIAISAY 230 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHH-HHHHHHHHH
Confidence 99999999999999999997543 3455667777777777655544333221111111122222233322 222333444
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 245 ~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
.+..++.++..++...+++|+++++++++++||+++..+++|+++++.|+++.++.++
T Consensus 231 ~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 231 MYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 5556999999999999999999999999999999999999999999999999876443
No 6
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.97 E-value=1e-28 Score=224.15 Aligned_cols=278 Identities=13% Similarity=0.094 Sum_probs=202.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHH-HHHHH
Q 017343 14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVV 92 (373)
Q Consensus 14 ~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 92 (373)
+.++++....++|++++...|...+ ..+|..+.++|+.++.+++.++.. ++..++.+++..+.+.++... +.+++
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~ 79 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTVG--FPRLRQFPKRYLLAGGLLFVSYEICLA 79 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHcc--ccccccccHHHHHHHhHHHHHHHHHHH
Confidence 3456677888999999999998764 578999999999999988876532 222233344455555555555 66667
Q ss_pred HHHhc----cchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCC-C--CCCCCCchhhH
Q 017343 93 KAYQY----TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGD-R--GSGSSPRKGDA 165 (373)
Q Consensus 93 ~al~~----~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~-~--~~~~~~~~G~~ 165 (373)
.+++| .+++.++++.++.|+++.+++++++|||++++++++++++++|++++..++..... + .+..+...|++
T Consensus 80 ~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~ 159 (295)
T PRK11689 80 LSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYG 159 (295)
T ss_pred HHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHH
Confidence 77754 67788899999999999999999999999999999999999999999875421100 0 01112346999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHH
Q 017343 166 LVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVP 245 (373)
Q Consensus 166 l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (373)
++++++++||+|.++.||..++.++..... ..+.+.+.+.... ++......++..+....+.+ ++....|....
T Consensus 160 ~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~~--~~t~~~~~l~~ 233 (295)
T PRK11689 160 LAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFL-SPQPAMVFSLPAIIKLLLAA--AAMGFGYAAWN 233 (295)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHH-hcCccccCCHHHHHHHHHHH--HHHHHHHHHHH
Confidence 999999999999999999887777765432 2223333232222 22211112222222222333 23344456667
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343 246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 246 ~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
+.+++.++..++...+++|+++++++++++||+++..+++|+++|+.|+++....+
T Consensus 234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 77799999999999999999999999999999999999999999999998876544
No 7
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.96 E-value=2.5e-27 Score=215.55 Aligned_cols=274 Identities=15% Similarity=0.108 Sum_probs=198.1
Q ss_pred HHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHH-HHHHHHHH
Q 017343 17 GLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVVKAY 95 (373)
Q Consensus 17 ~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al 95 (373)
++.+..+++|+.++...|...+ ..+|..++++|+.++++.++++..++ +.+++.....|++.... ..+++.++
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~ 80 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVARP----KVPLNLLLGYGLTISFGQFAFLFCAI 80 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcCC----CCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778999999999998764 57899999999999887666554322 22344455556655555 45667888
Q ss_pred hc-cchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHH
Q 017343 96 QY-TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLY 174 (373)
Q Consensus 96 ~~-~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~ 174 (373)
+| .+++.++++.++.|+++.+++++++|||++++++++++++++|+.++..++.+ ....+..|++++++++++|
T Consensus 81 ~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~-----~~~~~~~G~~l~l~aal~~ 155 (299)
T PRK11453 81 NFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLN-----GQHVAMLGFMLTLAAAFSW 155 (299)
T ss_pred HhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCC-----CcchhHHHHHHHHHHHHHH
Confidence 88 68899999999999999999999999999999999999999999998864321 1122347999999999999
Q ss_pred HHHHHHHHHHhccCChh---HHHHHHHHHHHHHHHHHHHHhhcccc-----ccccccccchhHHHHHHHHHHHHHHHHHH
Q 017343 175 AVSNVSEEFLVKKADRI---ELMAFLGLFGGIISAVQISILERKEL-----QSIHWSAGAALPFFGYALAMFLFYSFVPI 246 (373)
Q Consensus 175 a~~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (373)
+++.++.|+..++.++. ....+.+..+.+...+.....+.... ...++..+....+++.+.+ ...|.....
T Consensus 156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t-~~~~~l~~~ 234 (299)
T PRK11453 156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVAT-IVGYGIWGT 234 (299)
T ss_pred HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 99999999986654432 33445555544433333333332211 1112222222333332222 223344455
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 247 LLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 247 ~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
.+++.++...+...+++|+++.+++++++||+++..+++|++++++|+++..+.++
T Consensus 235 ~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 235 LLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 56899999999999999999999999999999999999999999999998766443
No 8
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.96 E-value=4.3e-27 Score=213.30 Aligned_cols=275 Identities=15% Similarity=0.077 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-ccCccchHHHHHHHHHHHHHHH
Q 017343 11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNF 89 (373)
Q Consensus 11 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~ 89 (373)
.+.+++.+.++..++|+.++.+.|...+ ..+|..+.++|++++.++++++...++ +..+++++..+..|++....+.
T Consensus 9 ~~~~~~~~~~la~~~~~~~~~~~K~~~~--~~~~~~~~~~R~~~a~l~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 86 (293)
T PRK10532 9 PVWLPILLLLIAMASIQSGASLAKSLFP--LVGAPGVTALRLALGTLILIAIFKPWRLRFAKEQRLPLLFYGVSLGGMNY 86 (293)
T ss_pred ccchHHHHHHHHHHHHHhhHHHHHHHHH--HcCHHHHHHHHHHHHHHHHHHHHhHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3477788888899999999999998875 468899999999999988887764433 3445677777788887666688
Q ss_pred HHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHH
Q 017343 90 LVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIA 169 (373)
Q Consensus 90 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~ 169 (373)
+++++++|++++.++++.++.|+++.+++ +||+++ +.++.++++|+.++..++.+. +.....|++++++
T Consensus 87 ~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~-----~~~~~~G~ll~l~ 155 (293)
T PRK10532 87 LFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDV-----SHVDLTGAALALG 155 (293)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCc-----ccCChHHHHHHHH
Confidence 88999999999999999999999998876 356554 455677889999887543211 2223579999999
Q ss_pred HHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHHh
Q 017343 170 GATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLK 249 (373)
Q Consensus 170 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (373)
++++|++|.+..|+..++.++... .+...++++++.+.....+.. ...++..+....+++. ++....|....+.++
T Consensus 156 aa~~~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~l~lgv-~~t~~~~~l~~~~~~ 231 (293)
T PRK10532 156 AGACWAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAGE--ALWHWSILPLGLAVAI-LSTALPYSLEMIALT 231 (293)
T ss_pred HHHHHHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccCc--ccCCHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999999999877777665 455566666665544332211 1112222111223332 223333345556669
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 250 TNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 250 ~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
+.++..+++..+++|+++.+++++++||+++..+++|+++|++|++...+..+
T Consensus 232 ~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~ 284 (293)
T PRK10532 232 RLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR 284 (293)
T ss_pred hcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999876543
No 9
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=6.9e-27 Score=216.24 Aligned_cols=280 Identities=12% Similarity=0.040 Sum_probs=215.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-c---c--CccchHHHHHHHHHHH
Q 017343 12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-Q---P--LKAKWYYYLILGLIDV 85 (373)
Q Consensus 12 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~---~--~~~~~~~~~~~g~~~~ 85 (373)
.++...+...+-.+.......+|.+.+ ....|+.++++|++++.++...+...+. + . .+..++..+..|+++.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~-~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALN-MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH-hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 344545444454555555555665554 3434999999999999876655433211 1 1 1335678889999998
Q ss_pred HHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhH
Q 017343 86 EGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDA 165 (373)
Q Consensus 86 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~ 165 (373)
..+...+.|+++++++.++++.++.|+++++++++++|||++++++++++++++|+++....+. .....|++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~--------~~~~~G~~ 197 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL--------HFTWLAFW 197 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc--------hhHHHHHH
Confidence 8877788999999999999999999999999999999999999999999999999999885332 22357999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccC-------ChhHHHHHHHHHHHHHHHHHHHHhhcccccc------cccccc----chh
Q 017343 166 LVIAGATLYAVSNVSEEFLVKKA-------DRIELMAFLGLFGGIISAVQISILERKELQS------IHWSAG----AAL 228 (373)
Q Consensus 166 l~l~a~~~~a~~~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~----~~~ 228 (373)
++++|++++++++++.|+..++. ++.....++.+.++++++|.....|...... .++... .+.
T Consensus 198 ~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~ 277 (350)
T PTZ00343 198 CAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIF 277 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHH
Confidence 99999999999999999988643 4555667778889888888776565421110 011111 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343 229 PFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300 (373)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 300 (373)
.++..++.++++|...+..+++.++...++..+++|+++++++++++||++++.+++|+++++.|+++|++.
T Consensus 278 ~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 278 KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 233456667777777778899999999999999999999999999999999999999999999999998753
No 10
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.96 E-value=8.7e-27 Score=208.34 Aligned_cols=257 Identities=18% Similarity=0.160 Sum_probs=199.4
Q ss_pred HHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHH-HHHHHHHHhccchhHHH
Q 017343 26 ITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVVKAYQYTSLTSVM 104 (373)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~al~~~~~~~~~ 104 (373)
|+.++...|...+ +..+|....+.|++.+.+++.++...+ ..+++++.....|.++... +.+++.|++|+++++++
T Consensus 1 Wg~~~~~~k~~~~-~~~~~~~~~~~r~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ 77 (260)
T TIGR00950 1 WGTTGVVIGQYLE-GQVPLYFAVFRRLIFALLLLLPLLRRR--PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA 77 (260)
T ss_pred CcchHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhc--cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence 6778888888765 356788888999888888777765544 4556677778888877666 78889999999999999
Q ss_pred HhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHH
Q 017343 105 LLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFL 184 (373)
Q Consensus 105 ~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~ 184 (373)
++.++.|+++++++.+++|||+++++++++.++++|+.++..++. ......|+++++.++++|+.+.++.|+.
T Consensus 78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~-------~~~~~~G~~~~l~a~~~~a~~~~~~k~~ 150 (260)
T TIGR00950 78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN-------LSINPAGLLLGLGSGISFALGTVLYKRL 150 (260)
T ss_pred HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc-------ccccHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999999999999999875431 2234689999999999999999999998
Q ss_pred hccCCh--hHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHH
Q 017343 185 VKKADR--IELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLT 262 (373)
Q Consensus 185 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 262 (373)
.++.++ .....+.+.++.+++.+.....+... ..+...+....+.+ .++....+....+..++.++..++...++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~~s~~~~~ 227 (260)
T TIGR00950 151 VKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP--QALSLQWGALLYLG-LIGTALAYFLWNKGLTLVDPSAASILALA 227 (260)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcchHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 877774 34555677788777766654433221 11111111122222 22222333444556699999999999999
Q ss_pred HHHHHHHHHHHHhcccccHHHHHHHHHHHHHhh
Q 017343 263 SDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLI 295 (373)
Q Consensus 263 ~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~ 295 (373)
+|+++++++++++||+++..+++|+++++.|+.
T Consensus 228 ~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 228 EPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999863
No 11
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.95 E-value=2.2e-26 Score=208.99 Aligned_cols=272 Identities=14% Similarity=0.080 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcc--c---CccchH--HHHHHH
Q 017343 9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ--P---LKAKWY--YYLILG 81 (373)
Q Consensus 9 ~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~--~---~~~~~~--~~~~~g 81 (373)
.+++.++.++..+.+++|+..+...|... ..+|..++++|++++.+++.++...+++ . ..++++ .....+
T Consensus 3 ~~~~~~g~~~~l~a~~~wg~~~~~~k~~~---~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (296)
T PRK15430 3 AKQTRQGVLLALAAYFIWGIAPAYFKLIY---YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVS 79 (296)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHH
Confidence 34567889999999999999999998752 3679999999999999877776544321 1 011122 223355
Q ss_pred HHHHHH-HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCC
Q 017343 82 LIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSP 160 (373)
Q Consensus 82 ~~~~~~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~ 160 (373)
.++... +.++++|++++++++++++.++.|+++++++++++|||+++++|++++++++|++++..++. +.
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~--------~~- 150 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG--------SL- 150 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC--------Cc-
Confidence 555554 88999999999999999999999999999999999999999999999999999999875321 11
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCC--hhHHHHHHHHHHHHHHHHHHHHhhcccccccccccc-chhHHHHHHHHH
Q 017343 161 RKGDALVIAGATLYAVSNVSEEFLVKKAD--RIELMAFLGLFGGIISAVQISILERKELQSIHWSAG-AALPFFGYALAM 237 (373)
Q Consensus 161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 237 (373)
..++++++++|++|.++.|+..++.. ....+.+...++.+...+ ..+.. ......... .+..+...++..
T Consensus 151 ---~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~g~~t 223 (296)
T PRK15430 151 ---PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFA---IADSS-TSHMGQNPMSLNLLLIAAGIVT 223 (296)
T ss_pred ---cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHH---HccCC-cccccCCcHHHHHHHHHHHHHH
Confidence 15688899999999999998754322 223334444444433211 11111 111111111 112222212223
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 238 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
...+.+..+..++.++..++...+++|+++++++++++||++++.+++|+++|+.|+.+...
T Consensus 224 ~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~ 285 (296)
T PRK15430 224 TVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVM 285 (296)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34445667777999999999999999999999999999999999999999999888776653
No 12
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.92 E-value=6.9e-24 Score=191.34 Aligned_cols=268 Identities=15% Similarity=0.114 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHh--c---ccCccchHHHHHHHH-HHHHHHH
Q 017343 16 LGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYR--R---QPLKAKWYYYLILGL-IDVEGNF 89 (373)
Q Consensus 16 ~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~--~---~~~~~~~~~~~~~g~-~~~~~~~ 89 (373)
+.+.++.+++++......|...++ .++. .+++.....+++.++...+ + +..+++++.....+. .+.....
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK--EPDF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc--hhHH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 456777888888888888855432 2333 4666666777777765543 1 233344454444444 4445588
Q ss_pred HHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHH
Q 017343 90 LVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIA 169 (373)
Q Consensus 90 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~ 169 (373)
+++.|+++.+++.++++.++.|+++.+++++++|||+++++|+|+.++++|++++..++.. .....|+.++++
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~-------~~~~~g~~~~l~ 151 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA-------QHRRKAYAWALA 151 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc-------ccchhHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999988764321 122368889999
Q ss_pred HHHHHHHHHHHHHHHhccCChhH----HHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHH
Q 017343 170 GATLYAVSNVSEEFLVKKADRIE----LMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVP 245 (373)
Q Consensus 170 a~~~~a~~~v~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (373)
++++|++|.+..|+..++.++.. .+.+......+...+.....+........+.. ....+.+ ++.....|....
T Consensus 152 aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~s~l~~~l~~ 229 (281)
T TIGR03340 152 AALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMFPYARQI-LPSATLG-GLMIGGAYALVL 229 (281)
T ss_pred HHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHH-HHHHHHH-HHHHHHHHHHHH
Confidence 99999999999987655444332 22222222211111111111111110111111 1112222 222233334555
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhe
Q 017343 246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLII 296 (373)
Q Consensus 246 ~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l 296 (373)
+.+++.++...+...+++|+++.+++++++||+++..+++|++++++|+++
T Consensus 230 ~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 230 WAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 666899999999999999999999999999999999999999999999875
No 13
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.92 E-value=1.9e-22 Score=183.75 Aligned_cols=280 Identities=20% Similarity=0.218 Sum_probs=221.6
Q ss_pred HHHHHHHhhHHHHhccCC--CcHHHHHHHHHHHHHHHHHHHHHhc--ccCccchHHHHHHHHHHHHHHHHHHHHHhccch
Q 017343 25 LITSTGFSSSELARKGIN--APTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSL 100 (373)
Q Consensus 25 ~~~~~~~~~~~l~~~~~~--~p~~~~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~ 100 (373)
..+..+.....+.+..+. .|..+++..+....++..+.....+ +..+.+++.++..+++......+.+.|++|++.
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~ 90 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFFLASVLSNAALKYISY 90 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 334455666666655444 4899999999988877766544433 566788899999999999999999999999999
Q ss_pred hHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCC--CCCchhhHHHHHHHHHHHHHH
Q 017343 101 TSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSG--SSPRKGDALVIAGATLYAVSN 178 (373)
Q Consensus 101 ~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~--~~~~~G~~l~l~a~~~~a~~~ 178 (373)
+...+++++.|+++++++.+++|+|++++++.++++..+|+++....+......... .+...|+++.+.+.++.++..
T Consensus 91 p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~ 170 (303)
T PF08449_consen 91 PTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTG 170 (303)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999877543332211 222359999999999999999
Q ss_pred HHHHHHhcc--CChhHHHHHHHHHHHHHHHHHHHHhh--cc-cccc-ccccccchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 017343 179 VSEEFLVKK--ADRIELMAFLGLFGGIISAVQISILE--RK-ELQS-IHWSAGAALPFFGYALAMFLFYSFVPILLKTNG 252 (373)
Q Consensus 179 v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (373)
+++++..++ .++.+.+++..+++.++..+.....+ .. +... ....+..+..++...++............++.+
T Consensus 171 ~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~~~~ 250 (303)
T PF08449_consen 171 VYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIKKFS 250 (303)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999874 45888999999999998876665522 11 1111 112222334444455555555566667779999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343 253 ATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDD 304 (373)
Q Consensus 253 a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~ 304 (373)
+...+++..++.+++++++++++++++++.+|+|.++++.|..++.+.++++
T Consensus 251 al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 251 ALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred chhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999999876654
No 14
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.90 E-value=1.5e-21 Score=177.17 Aligned_cols=280 Identities=20% Similarity=0.225 Sum_probs=197.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---ccCccchHHHHHHHHHHHH
Q 017343 10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPLKAKWYYYLILGLIDVE 86 (373)
Q Consensus 10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~ 86 (373)
++...+.....+.++.|+......+...+. ..++....+.|...+.+.+.+....++ ...+.+++...+.+.++..
T Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (292)
T COG0697 3 RALLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLA 81 (292)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence 344556666667778888888888877653 345566667798888887444443332 2222223445555555555
Q ss_pred H-HHHHHHHHhccchhHHHHhhcchhhHHHHHHH-HHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhh
Q 017343 87 G-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTW-IFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGD 164 (373)
Q Consensus 87 ~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~-~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~ 164 (373)
. ..+++.++++++++.++++.++.|+++.++++ +++|||++++++++++++++|++++..++..... . ...|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~----~-~~~g~ 156 (292)
T COG0697 82 LPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI----L-SLLGL 156 (292)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh----H-HHHHH
Confidence 5 88889999999999999999999999999997 7779999999999999999999999987653110 0 46899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCChhHHHH-HHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHH
Q 017343 165 ALVIAGATLYAVSNVSEEFLVKKADRIELMA-FLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSF 243 (373)
Q Consensus 165 ~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (373)
.+++.++++++++.+..|+.. +.++..... ++.. ..... .........+ .+..+..+....+.+..... ..+..
T Consensus 157 ~~~l~a~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~-i~~~~ 231 (292)
T COG0697 157 LLALAAALLWALYTALVKRLS-RLGPVTLALLLQLL-LALLL-LLLFFLSGFG-APILSRAWLLLLYLGVFSTG-LAYLL 231 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHH-HHHHH-HHHHHhcccc-ccCCHHHHHHHHHHHHHHHH-HHHHH
Confidence 999999999999999999987 666655555 3333 22211 1111111111 11111112222222222221 23344
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343 244 VPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300 (373)
Q Consensus 244 ~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 300 (373)
.....+..++...+...+++|++++++++++++|+++..+++|+++++.|+++...+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 232 WYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 455569999999999999999999999999999999999999999999999998765
No 15
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.90 E-value=6.8e-23 Score=182.34 Aligned_cols=278 Identities=13% Similarity=0.179 Sum_probs=227.4
Q ss_pred HHHHHHHHHHHHHhhHHHHhc-cCCCcHHHHHHHHHHHHHHHHHHHHHhc-c----cCccchHHHHHHHHHHHHHHHHHH
Q 017343 19 GQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRR-Q----PLKAKWYYYLILGLIDVEGNFLVV 92 (373)
Q Consensus 19 ~~~~~l~~~~~~~~~~~l~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~----~~~~~~~~~~~~g~~~~~~~~~~~ 92 (373)
..++..+.......+|+..+. ++..|.+++.++..++.+.+......+. + ..+..++..+.+|++...+.++.+
T Consensus 22 ~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~~~~~v~~n 101 (316)
T KOG1441|consen 22 FAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVFCISHVLGN 101 (316)
T ss_pred HHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHHHHHHHhcc
Confidence 333333334444456766655 7889999999988888877766544443 1 234678899999999999999999
Q ss_pred HHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHH
Q 017343 93 KAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGAT 172 (373)
Q Consensus 93 ~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~ 172 (373)
.|+.+.+++.+++++.+.|+++.++++++.+|+.++..+.+++....||.+....+. .-+..|.+.++++.+
T Consensus 102 ~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~--------~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 102 VSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL--------SFNLFGFISAMISNL 173 (316)
T ss_pred hhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc--------cccHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998553 345699999999999
Q ss_pred HHHHHHHHHHHHhc----cCChhHHHHHHHHHHHHHHH-HHHHHhhcccc---ccccccccchhHHHHHHHHHHHHHHHH
Q 017343 173 LYAVSNVSEEFLVK----KADRIELMAFLGLFGGIISA-VQISILERKEL---QSIHWSAGAALPFFGYALAMFLFYSFV 244 (373)
Q Consensus 173 ~~a~~~v~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (373)
..++.+++.++..+ +.|+.+++.++..++.++++ |.....++... ...+|+......++.. ++.+..|...
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-v~~f~~Nls~ 252 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLNS-VLAFLLNLSA 252 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHHH-HHHHHHHHHH
Confidence 99999999999984 46799999999999999998 55555454433 2223443333333333 7788889999
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCC
Q 017343 245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDD 305 (373)
Q Consensus 245 ~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~ 305 (373)
+.++.+++|...++.+.++-++.++.++++|+++.|+.+.+|+++.+.|+++|++.+.+++
T Consensus 253 f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 253 FLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred HHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999999999999999999999999999999999999999998665443
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.90 E-value=4.8e-25 Score=184.70 Aligned_cols=284 Identities=15% Similarity=0.198 Sum_probs=214.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---ccCccchHHHHHHHHHHHHH
Q 017343 11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPLKAKWYYYLILGLIDVEG 87 (373)
Q Consensus 11 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~~ 87 (373)
....++.+..+..++-.++....+.+ ...|..+.-.|++.-.++..+...+++ .-++...+.++++|+.|+.+
T Consensus 35 ~p~~gl~l~~vs~ff~~~~vv~t~~~----e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tg 110 (346)
T KOG4510|consen 35 KPNLGLLLLTVSYFFNSCMVVSTKVL----ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTG 110 (346)
T ss_pred CCccCceehhhHHHHhhHHHhhhhhh----ccChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhH
Confidence 33445555444433333333333333 346888888887777766666655554 12333344577889999999
Q ss_pred HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCC------CCCCCc
Q 017343 88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG------SGSSPR 161 (373)
Q Consensus 88 ~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~------~~~~~~ 161 (373)
.++.|+|++|++.+.++++.+.+|+++.+++++++|||.++...++..+.+.||++++.+..--+++. +...+.
T Consensus 111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~ 190 (346)
T KOG4510|consen 111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI 190 (346)
T ss_pred HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999998765333322 223456
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (373)
.|.+.++.+.++.|...++.|++.|+.+....+.|..+++.+...+.....+...+|+-..++ ++++-.++..+..+
T Consensus 191 ~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~cgkdr---~l~~~lGvfgfigQ 267 (346)
T KOG4510|consen 191 PGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPHCGKDR---WLFVNLGVFGFIGQ 267 (346)
T ss_pred CchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCccccce---EEEEEehhhhhHHH
Confidence 899999999999999999999999999988778888888888776665544433333222222 22222233445566
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 242 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
.+....++...|...++..++..+++.++.+++|||.||++.|+|+++++.+.+.....+
T Consensus 268 IllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 268 ILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred HHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 677777899999999999999999999999999999999999999999999988766533
No 17
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.89 E-value=1.8e-21 Score=173.41 Aligned_cols=242 Identities=14% Similarity=-0.021 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---------c-cCccc-hHHHHHHHH
Q 017343 14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---------Q-PLKAK-WYYYLILGL 82 (373)
Q Consensus 14 ~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---------~-~~~~~-~~~~~~~g~ 82 (373)
+|.++..+.+++|+..+.+.|.+. ..+|.+++++|++++.+++.+++..++ + ..+++ +......|+
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~~---~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLLK---PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 467788889999999999999842 368999999999999988776543221 1 11222 223555666
Q ss_pred HHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCch
Q 017343 83 IDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRK 162 (373)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~ 162 (373)
+....+.+++.|++++++++++++.++.|+++++++++++|||+++++|++++++++|++++..++. ..
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~--------~~--- 147 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG--------SL--- 147 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC--------Cc---
Confidence 6666688999999999999999999999999999999999999999999999999999998765321 11
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhcccccccccc-ccchhHHHHHHHHHHHHH
Q 017343 163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWS-AGAALPFFGYALAMFLFY 241 (373)
Q Consensus 163 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 241 (373)
..++++++++|++|.+..|+..++ +....... ......+..+.....+.......+.. .+.+..+.+. . ....|
T Consensus 148 -~~~~l~aa~~~a~~~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~-t~i~~ 222 (256)
T TIGR00688 148 -PWEALVLAFSFTAYGLIRKALKNT-DLAGFCLE-TLSLMPVAIYYLLQTDFATVQQTNPFPIWLLLVLAGL-I-TGTPL 222 (256)
T ss_pred -hHHHHHHHHHHHHHHHHHhhcCCC-CcchHHHH-HHHHHHHHHHHHHHhccCcccccCchhHHHHHHHHHH-H-HHHHH
Confidence 146789999999999999987543 32222211 11111121111111111111111111 2222333332 2 33455
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 017343 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIGA 274 (373)
Q Consensus 242 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~ 274 (373)
.+....+++.++..++...+++|+++.++++++
T Consensus 223 ~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 223 LAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 666777899999999999999999999999864
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.89 E-value=3.2e-21 Score=169.62 Aligned_cols=223 Identities=21% Similarity=0.257 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCC
Q 017343 77 YLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGS 156 (373)
Q Consensus 77 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~ 156 (373)
.+....+.+..++.++.||.+++++..+++.+++.+|+..++.++..||++..+.+++++.+.|+++++..+..++++..
T Consensus 162 sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~ 241 (416)
T KOG2765|consen 162 SLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLP 241 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCC
Confidence 34556677777999999999999999999999999999999999999999999999999999999999998876665556
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHhccC----ChhHHHHHHHHHHHHHHHHHHHHhhccccccccccc------cc
Q 017343 157 GSSPRKGDALVIAGATLYAVSNVSEEFLVKKA----DRIELMAFLGLFGGIISAVQISILERKELQSIHWSA------GA 226 (373)
Q Consensus 157 ~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 226 (373)
.....+|.++++++++.||+|.++.||...+. |.-.+.++.+++..+++.|...+.+....+.++.+. ..
T Consensus 242 a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv 321 (416)
T KOG2765|consen 242 ASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVV 321 (416)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeee
Confidence 66778999999999999999999999987655 344577888888888888877776655444443332 22
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCC
Q 017343 227 ALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKD 303 (373)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~ 303 (373)
...+++.+++-++|-.+. -.+++.++.+.+.++.+++++.+.++-|..+++.+++|.+.|++|.++.++....
T Consensus 322 ~~~ligtvvSDylW~~a~----~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~ 394 (416)
T KOG2765|consen 322 FNNLIGTVVSDYLWAKAV----LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN 394 (416)
T ss_pred HhhHHHHHHHHHHHHHHH----HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence 233667777777775554 6788999999999999999999999999999999999999999999999986543
No 19
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.87 E-value=1.3e-19 Score=151.28 Aligned_cols=264 Identities=17% Similarity=0.068 Sum_probs=206.7
Q ss_pred HHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-ccCccchHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 017343 24 LLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTS 102 (373)
Q Consensus 24 l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~ 102 (373)
+.......+.|.+. ....|.-.+.+|..++.++++.+++..+ +..+++|...+..|+.....|.++|.+++.+|.+.
T Consensus 22 vsiq~Gas~Ak~LF--P~vG~~g~t~lRl~~aaLIll~l~RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGi 99 (292)
T COG5006 22 VSIQSGASFAKSLF--PLVGAAGVTALRLAIAALILLALFRPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGI 99 (292)
T ss_pred HHHHhhHHHHHHHc--cccChhhHHHHHHHHHHHHHHHHhhHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 33444445555555 3566889999999999999988776544 77788899999999988888999999999999999
Q ss_pred HHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 017343 103 VMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEE 182 (373)
Q Consensus 103 ~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~ 182 (373)
+..+.++.|+.+.+++. + +.+..+.+.+++.|+.++.-.+... ...+..|..+++.++.||++|.+..+
T Consensus 100 AVAiEF~GPL~vA~~~s----R--r~~d~vwvaLAvlGi~lL~p~~~~~-----~~lDp~Gv~~Al~AG~~Wa~YIv~G~ 168 (292)
T COG5006 100 AVAIEFTGPLAVALLSS----R--RLRDFVWVALAVLGIWLLLPLGQSV-----WSLDPVGVALALGAGACWALYIVLGQ 168 (292)
T ss_pred hhhhhhccHHHHHHHhc----c--chhhHHHHHHHHHHHHhheeccCCc-----CcCCHHHHHHHHHHhHHHHHHHHHcc
Confidence 99999999999987653 2 3345556666778888877533211 23345999999999999999999999
Q ss_pred HHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhH-HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHH
Q 017343 183 FLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALP-FFGYALAMFLFYSFVPILLKTNGATMLNLSLL 261 (373)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 261 (373)
|..+..+...-+..-+.+++++..|+.....+..+ +++..... +...+++...-|.+....+++.+....+....
T Consensus 169 r~g~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l----~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlS 244 (292)
T COG5006 169 RAGRAEHGTAGVAVGMLVAALIVLPIGAAQAGPAL----FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLS 244 (292)
T ss_pred hhcccCCCchHHHHHHHHHHHHHhhhhhhhcchhh----cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHH
Confidence 99887777788888888888888777653333221 22222222 33345567778888888999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343 262 TSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDD 304 (373)
Q Consensus 262 ~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~ 304 (373)
+||.++.+.|++++||.+|+.||+|+++|+.+..-..+..|++
T Consensus 245 LePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~ 287 (292)
T COG5006 245 LEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKP 287 (292)
T ss_pred hhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCC
Confidence 9999999999999999999999999999999998777655443
No 20
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.82 E-value=2.1e-18 Score=155.73 Aligned_cols=271 Identities=13% Similarity=0.060 Sum_probs=185.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccC---ccchHHHHHHHHHHHHHHHHH
Q 017343 15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPL---KAKWYYYLILGLIDVEGNFLV 91 (373)
Q Consensus 15 ~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~ 91 (373)
++++.++.+++|++.+...|... +. ++.+.. |..++.+++..+....+.+. +..+..-.+.|+....++.++
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~--g~-~~~~~~--~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~l~G~~w~ig~~~~ 76 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG--GG-PYSQTL--GTTFGALILSIAIAIFVLPEFWALSIFLVGLLSGAFWALGQINQ 76 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC--CC-HHHHHH--HHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHhhhhhH
Confidence 46677888899999999999765 32 333333 66666666554433322111 112222334444455558999
Q ss_pred HHHHhccchhHHHHhhc-chhhHHHHHHHHHhccccceee----eehhhhheecceeeeeccCccCCCCCCCCCchhhHH
Q 017343 92 VKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKK----ITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDAL 166 (373)
Q Consensus 92 ~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~l~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l 166 (373)
+.|.++++++.+..+.+ +.+++..+++.+++|||.++++ ++|++++++|++++...+.+..+++...+...|+++
T Consensus 77 ~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~ 156 (290)
T TIGR00776 77 FKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILL 156 (290)
T ss_pred HHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHH
Confidence 99999999999999988 8888888999999999999999 999999999999987754321110000233579999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCChhHHHHHHHH---HHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHH
Q 017343 167 VIAGATLYAVSNVSEEFLVKKADRIELMAFLGL---FGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSF 243 (373)
Q Consensus 167 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (373)
+++++++|++|.+..|.. +.+|....+.+.. .++++..... .... +..........+.|.. ....|..
T Consensus 157 ~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~Gi~--~~ia~~~ 227 (290)
T TIGR00776 157 LLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGH--ILAK---PLKKYAILLNILPGLM--WGIGNFF 227 (290)
T ss_pred HHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHH--hccc---chHHHHHHHHHHHHHH--HHHHHHH
Confidence 999999999999999975 4788877444443 3333322222 1001 1111111111222221 2233333
Q ss_pred HHHHHh-hcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhheeec
Q 017343 244 VPILLK-TNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYF----IAFAAVAVGLIIYSG 299 (373)
Q Consensus 244 ~~~~~~-~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~ 299 (373)
.....+ +.++...+...+.+|+.+.+++++++||..+..++ +|+++++.|+.+...
T Consensus 228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 334446 89999999999999999999999999999999999 999999999987643
No 21
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.82 E-value=1.8e-18 Score=148.62 Aligned_cols=271 Identities=16% Similarity=0.094 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-----ccCccchHHH--HHHHH
Q 017343 10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-----QPLKAKWYYY--LILGL 82 (373)
Q Consensus 10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-----~~~~~~~~~~--~~~g~ 82 (373)
|+..+|+++++...++|+......|.+. ..++.++...|.+.+..+++..+...+ +...++++.+ +..+.
T Consensus 3 ~~~~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a 79 (293)
T COG2962 3 KDSRKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA 79 (293)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence 5567899999999999999999999886 567889999999988877766543322 1112222222 22333
Q ss_pred HHHHHHHH-HHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCc
Q 017343 83 IDVEGNFL-VVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPR 161 (373)
Q Consensus 83 ~~~~~~~~-~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~ 161 (373)
+.+..|+. +.+|.++..+-++++=++.+|++.++++.+++|||+++.||+++.++.+||...+...+ +-+
T Consensus 80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g--------~lp- 150 (293)
T COG2962 80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG--------SLP- 150 (293)
T ss_pred HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC--------CCc-
Confidence 33444554 45999999999999999999999999999999999999999999999999999887442 122
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhH--HHHHHH--HH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALP--FFGYAL--AM 237 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~ 237 (373)
..++.=++.|++|..+-|+. +.|+.+-.....+.-...........+..+......++..+.. ..|.+. ..
T Consensus 151 ---wval~la~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LLv~aG~vTavpL 225 (293)
T COG2962 151 ---WVALALALSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLLVLAGLVTAVPL 225 (293)
T ss_pred ---HHHHHHHHHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHHHHhhHHHHHHH
Confidence 34566688999999877664 4666666655555555555444444443321011122222222 233222 23
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343 238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 238 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
.++ ...-++.+-.+.++.+|.+|..-.+++++++||+++..++...+.|-+|++++..+.
T Consensus 226 ~lf----~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~ 285 (293)
T COG2962 226 LLF----AAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDG 285 (293)
T ss_pred HHH----HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 333 333489999999999999999999999999999999999999999999999988643
No 22
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.81 E-value=2.9e-17 Score=145.24 Aligned_cols=286 Identities=15% Similarity=0.130 Sum_probs=211.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhcc--CCCcHHHHHHHHHHHHHHHHHHHHHh-----c----------ccCccchHH
Q 017343 14 LGLGLGQFLSLLITSTGFSSSELARKG--INAPTSQSFFNYVLLAIVYGSLMLYR-----R----------QPLKAKWYY 76 (373)
Q Consensus 14 ~~~~l~~~~~l~~~~~~~~~~~l~~~~--~~~p~~~~~~r~~~~~~~l~~~~~~~-----~----------~~~~~~~~~ 76 (373)
.-.+..++..+-+++.-...++..+.+ ...|...+++--.+-.++....+... + ...+++..+
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 344444566677777777777776543 23456667666666665555443332 1 112234456
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCC---
Q 017343 77 YLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGD--- 153 (373)
Q Consensus 77 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~--- 153 (373)
+.+.+++...-|.++|.++.+.+++.+++..++..+.++++..+++++|++++||.++++.++|+.++..+.....+
T Consensus 95 ~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~ 174 (345)
T KOG2234|consen 95 VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKS 174 (345)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccC
Confidence 77888888888889999999999999999999999999999999999999999999999999999999843322211
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC--ChhHHHHHHHHHHHHHHHHHHHHhhcccccc----ccccccch
Q 017343 154 RGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA--DRIELMAFLGLFGGIISAVQISILERKELQS----IHWSAGAA 227 (373)
Q Consensus 154 ~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 227 (373)
.....+...|....+.+++..++..++.+|.+|+. +.+..+...+.+|.++.+...+..++..... ..|+...|
T Consensus 175 ~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw 254 (345)
T KOG2234|consen 175 ESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVW 254 (345)
T ss_pred CCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHH
Confidence 12355678999999999999999999999999754 4666777788888888877666665553321 12333333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCC
Q 017343 228 LPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKD 303 (373)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~ 303 (373)
...+....+.. ....+.++.+...-.....+..+++.+.++.+++.+||....+|+.+++.++.+|...+++
T Consensus 255 ~vVl~~a~gGL----lvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 255 LVVLLNAVGGL----LVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred HHHHHHhccch----hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 33333333322 2234458889888888888889999999999999999999999999999999999855543
No 23
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.81 E-value=5.5e-18 Score=145.43 Aligned_cols=285 Identities=15% Similarity=0.169 Sum_probs=209.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-----ccCccchHHHH-
Q 017343 5 KEFWTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-----QPLKAKWYYYL- 78 (373)
Q Consensus 5 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-----~~~~~~~~~~~- 78 (373)
++.++.++..-+.+.+.+.++.-+.-...++..+ .+..|.+++.++.++-.++-....+.++ .+..-.|..++
T Consensus 7 ~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~-~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr 85 (349)
T KOG1443|consen 7 DNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTK-NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLR 85 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHH
Confidence 3444444444444433333333333222333322 6788999999998887776555433322 12233444433
Q ss_pred ---HHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCC
Q 017343 79 ---ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG 155 (373)
Q Consensus 79 ---~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~ 155 (373)
..|+.......+.+++++|++.+.+++.++.+++|+.+++.+|.-||+++.-...++++.+|+++++..+.
T Consensus 86 ~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT------ 159 (349)
T KOG1443|consen 86 RLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST------ 159 (349)
T ss_pred HhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc------
Confidence 55665555588999999999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC-----ChhHHHHHHHHHHHHHHHHHHHHhhccccccc------ccc-
Q 017343 156 SGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA-----DRIELMAFLGLFGGIISAVQISILERKELQSI------HWS- 223 (373)
Q Consensus 156 ~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 223 (373)
+-...|..+..++.++.++...+.+.++++. +|...++.......+.+++..+.+|+...... .-.
T Consensus 160 --qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~ 237 (349)
T KOG1443|consen 160 --QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTG 237 (349)
T ss_pred --ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCcc
Confidence 2346899999999999999999999888654 48888898888888888888888887733210 011
Q ss_pred --ccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 224 --AGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 224 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
......+.+.+...++.-...+.++.+++....++.+..+-+.+.+++.++.+|.++...|+|..+...|+.++.
T Consensus 238 ~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 238 LILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 111122333344455555566667788999999999999999999999999999999999999999999999983
No 24
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.79 E-value=2.7e-17 Score=141.34 Aligned_cols=264 Identities=14% Similarity=0.158 Sum_probs=212.1
Q ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHhc--ccCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHH
Q 017343 40 GINAPTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFL 117 (373)
Q Consensus 40 ~~~~p~~~~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll 117 (373)
.+.+|.++++.+.+.+.++-..++..++ ...+.+|+++...++.+.....|.|.|++|++.....+-+++..+.++++
T Consensus 47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlm 126 (327)
T KOG1581|consen 47 RFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLM 126 (327)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHH
Confidence 4678899999999888887766554443 56678999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccceeeeehhhhheecceeeeeccCccC-CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhcc--CChhHHH
Q 017343 118 TWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAG-DRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKK--ADRIELM 194 (373)
Q Consensus 118 ~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~-~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~--~~~~~~~ 194 (373)
+.++.|+|++..+++..++..+|+.+....+.... ......+...|..+.....++.++.+..+.++.++ .+++.++
T Consensus 127 g~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM 206 (327)
T KOG1581|consen 127 GTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMM 206 (327)
T ss_pred HHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHH
Confidence 99999999999999999999999999987654332 22244577899999999999999999999999874 4688999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccc---ccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Q 017343 195 AFLGLFGGIISAVQISILERKELQSIH---WSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIR 271 (373)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~ 271 (373)
++..+++++..... ++..+...+... .++..+.-++....+....+..+...+++.++.+...++.++-+++++++
T Consensus 207 ~~vNLf~~i~~~~~-li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS 285 (327)
T KOG1581|consen 207 FGVNLFSAILNGTY-LILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLS 285 (327)
T ss_pred HHHHHHHHHHHHHh-hhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHH
Confidence 99999999988554 343333222221 22233333333334434444555666799999999999999999999999
Q ss_pred HHHhcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343 272 IGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDD 304 (373)
Q Consensus 272 ~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~ 304 (373)
.+.+|++++..|+.|..+++.|+.+-...++++
T Consensus 286 ~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~ 318 (327)
T KOG1581|consen 286 CIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK 318 (327)
T ss_pred HHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence 999999999999999999999998876655443
No 25
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.79 E-value=8.6e-18 Score=142.29 Aligned_cols=260 Identities=23% Similarity=0.266 Sum_probs=204.4
Q ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHhc---------------ccC--ccchHHHHHHHHHHHHHHHHHHHHHhccchhH
Q 017343 40 GINAPTSQSFFNYVLLAIVYGSLMLYRR---------------QPL--KAKWYYYLILGLIDVEGNFLVVKAYQYTSLTS 102 (373)
Q Consensus 40 ~~~~p~~~~~~r~~~~~~~l~~~~~~~~---------------~~~--~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~ 102 (373)
++++|+.++..-++--++++..+...|. ... +-+...++..+++...+..+.|.++.+++++.
T Consensus 35 gfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~lfl~Pal~Di~gsslm~vgL~lTsASs 114 (372)
T KOG3912|consen 35 GFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVLFLPPALCDIAGSSLMYVGLNLTSASS 114 (372)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcceecChHHHHHhhhHHHHHHHHHhhHHH
Confidence 5788999988888888788877755443 011 22233455679999999999999999999999
Q ss_pred HHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCC--CCCCCchhhHHHHHHHHHHHHHHHH
Q 017343 103 VMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRG--SGSSPRKGDALVIAGATLYAVSNVS 180 (373)
Q Consensus 103 ~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~--~~~~~~~G~~l~l~a~~~~a~~~v~ 180 (373)
.+++.....+|+.+++..+++++++.+||+|+....+|++.+...|.....+. +.++...|+++.+.+-+.-|...++
T Consensus 115 fQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~iitGdllIiiaqiivaiQ~v~ 194 (372)
T KOG3912|consen 115 FQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSSIITGDLLIIIAQIIVAIQMVC 194 (372)
T ss_pred HHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998876544333 2356678999999999999999999
Q ss_pred HHHHhccC--ChhHHHHHHHHHHHHHHHHHHHHhh----ccccc---cc---cc---------cccchhHHHHHHHHHHH
Q 017343 181 EEFLVKKA--DRIELMAFLGLFGGIISAVQISILE----RKELQ---SI---HW---------SAGAALPFFGYALAMFL 239 (373)
Q Consensus 181 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~---~~---------~~~~~~~~~~~~~~~~~ 239 (373)
.+|..++. +|....+|..++|.++......... +.++. +- +| .+...+.+.+..++...
T Consensus 195 Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~vSiAf 274 (372)
T KOG3912|consen 195 EEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFTVSIAF 274 (372)
T ss_pred HHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhhhheee
Confidence 99998755 5999999999999665543332221 11111 00 11 12223334555666556
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 240 ~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
||.....+.+..+++.-.+.-.++..+--++++.+..|.++..|+.|.++.+.|+++|+.
T Consensus 275 fNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~~ 334 (372)
T KOG3912|consen 275 FNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYNQ 334 (372)
T ss_pred eeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777778999999999999999999999999999999999999999999999999974
No 26
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.76 E-value=7.1e-17 Score=141.05 Aligned_cols=218 Identities=18% Similarity=0.175 Sum_probs=171.3
Q ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343 69 PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD 148 (373)
Q Consensus 69 ~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 148 (373)
..+++..++.+.+++....|.+.+.++++++++..+++.++..+++++++++++|+|++++||.++++.++|++++...+
T Consensus 12 ~~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~ 91 (244)
T PF04142_consen 12 KSPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSS 91 (244)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCC
Confidence 34566778889999999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred CccCCCC---------CCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC--ChhHHHHHHHHHHHHHHHHHHHHhhcccc
Q 017343 149 VHAGDRG---------SGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA--DRIELMAFLGLFGGIISAVQISILERKEL 217 (373)
Q Consensus 149 ~~~~~~~---------~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (373)
....+.. ...+...|.++.++++++.++..++.+|..|+. +.+..+...++++.++.++.....++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~ 171 (244)
T PF04142_consen 92 SQSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAI 171 (244)
T ss_pred ccccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 5432111 123457999999999999999999999999866 45667778888888887666545444322
Q ss_pred ccc----cccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 017343 218 QSI----HWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAV 290 (373)
Q Consensus 218 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li 290 (373)
.+. .++++.+..++...++. .....++|+.+...-+.....+.+++.+.++++|+.+++....+|+.++
T Consensus 172 ~~~g~f~G~~~~~~~~i~~~a~gG----llva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 172 SESGFFHGYSWWVWIVIFLQAIGG----LLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred ccCCchhhcchHHHHHHHHHHHhh----HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 211 23333333222222222 2334556999999999999999999999999999999999999998753
No 27
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.73 E-value=2.9e-17 Score=135.64 Aligned_cols=257 Identities=14% Similarity=0.153 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc--ccCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHh
Q 017343 45 TSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFL 122 (373)
Q Consensus 45 ~~~~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l 122 (373)
..++|+...+-.++.=+++..|+ +..+.+-+.++..++-........+.|++|++.....+-.++.|+-+++++.++.
T Consensus 54 laLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~ 133 (337)
T KOG1580|consen 54 LALVFFQCTANTVFAKVLFLIRKKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFA 133 (337)
T ss_pred HHHHHHHHHHHHHHHHhheeecccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhh
Confidence 44556666665555433333333 4556667778887887777788899999999999999999999999999999999
Q ss_pred ccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC--ChhHHHHHHHHH
Q 017343 123 KTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA--DRIELMAFLGLF 200 (373)
Q Consensus 123 ~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~~~~~ 200 (373)
+++.+|+++..++++++||.+....+...++. ...+...|.++.+++.-..++....+.+..+.. ....++.+..++
T Consensus 134 ~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~-e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~Nlw 212 (337)
T KOG1580|consen 134 HKSYHWRKYCCVLMIVVGVALFMYKENKVGGA-EDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLW 212 (337)
T ss_pred cccccHHHHHHHHHHHHHHHHhhccccccCCC-cccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHH
Confidence 99999999999999999999999864322221 234456899999999999999999999987644 355789999999
Q ss_pred HHHHHHHHHHHhhcc-ccccc-cccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhccc
Q 017343 201 GGIISAVQISILERK-ELQSI-HWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEK 278 (373)
Q Consensus 201 ~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~ 278 (373)
+.+.+....++.+.. ++..+ +..+..+.-+.+.+++..+.+..++......++...+++..++..++++.+.++|+.+
T Consensus 213 StL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~np 292 (337)
T KOG1580|consen 213 STLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNP 292 (337)
T ss_pred HHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCc
Confidence 999887666544321 11111 1122233334555566666667777778999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHhheeecCCC
Q 017343 279 VDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 279 ~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
++.+||+|.++++.|...-....|
T Consensus 293 ls~rQwlgtvlVF~aL~~D~~~GK 316 (337)
T KOG1580|consen 293 LSGRQWLGTVLVFSALTADVVDGK 316 (337)
T ss_pred CcHHHHHHHHHHHHHhhhHhhcCC
Confidence 999999999999999877554433
No 28
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.64 E-value=2.1e-14 Score=125.35 Aligned_cols=291 Identities=15% Similarity=0.079 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHH--HHHHHHHHHHHHHHHHHhc----ccCccchHHHHHHH
Q 017343 8 WTKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQS--FFNYVLLAIVYGSLMLYRR----QPLKAKWYYYLILG 81 (373)
Q Consensus 8 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~--~~r~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~g 81 (373)
..++..+.+..++...+..+..-.++|+... .+..|..+. ..+.+...+.+...-+.+- +..++..++++...
T Consensus 6 ~~~~~~~~l~sa~~Y~~sS~lm~vvNK~vls-~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~ 84 (314)
T KOG1444|consen 6 GSKKQSSPLLSALFYCLSSILMTVVNKIVLS-SYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVS 84 (314)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHH
Confidence 3445556666666666677777777777654 344455544 4777777666555433322 44566777888888
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCc
Q 017343 82 LIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPR 161 (373)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~ 161 (373)
++..+.......+++|.++...+++.+..|+++++....++|.|+++..|.++....+|......+|.. ...
T Consensus 85 ~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s--------f~~ 156 (314)
T KOG1444|consen 85 LLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS--------FNL 156 (314)
T ss_pred HHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce--------ecc
Confidence 887777777779999999999999999999999999999999999999999999999999988887642 234
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc--cCChhHHHHHHHHHHHHHHHHHHHHhhcccccccc---cc-ccchhHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVK--KADRIELMAFLGLFGGIISAVQISILERKELQSIH---WS-AGAALPFFGYAL 235 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~ 235 (373)
.|..+++...++-+.+.++.|+..+ +.+.+.+++|..+.+.....+...+++..+--..+ |. ...+..+...++
T Consensus 157 ~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv 236 (314)
T KOG1444|consen 157 RGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV 236 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence 6999999999999999999999875 34567788898898888876666666543200111 22 112233333444
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCCCc
Q 017343 236 AMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQP 307 (373)
Q Consensus 236 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~~ 307 (373)
..+...+......+..++...++++......+.+...++++++.++..++|..+-+.|.++|++.+.++++.
T Consensus 237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~ 308 (314)
T KOG1444|consen 237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ 308 (314)
T ss_pred HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence 444555555666788999999999988888888888888889999999999999999999999877554433
No 29
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1.7e-14 Score=121.95 Aligned_cols=273 Identities=14% Similarity=0.135 Sum_probs=208.5
Q ss_pred HHHHHHHHhhHHHHhc-cCC-CcHHHHHHHHHHHHHHHHHHHH-HhcccCccchHHHHHHHHHHHHHHHHHHHHHhccch
Q 017343 24 LLITSTGFSSSELARK-GIN-APTSQSFFNYVLLAIVYGSLML-YRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSL 100 (373)
Q Consensus 24 l~~~~~~~~~~~l~~~-~~~-~p~~~~~~r~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~ 100 (373)
++.-..+....+..+. ++. ..|.+++.+++.-..+.+..+. ++.++...+|+.+..++++....+.+.+.++.|...
T Consensus 53 f~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP~rtY~~la~~t~gtmGLsn~SlgYLNY 132 (367)
T KOG1582|consen 53 FLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIPWRTYVILAFLTVGTMGLSNGSLGYLNY 132 (367)
T ss_pred HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecchhHhhhhHhhhhhccccCcCccccccC
Confidence 3444445555555554 443 4477787777665444333221 222566778999999999888889999999999999
Q ss_pred hHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHH
Q 017343 101 TSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVS 180 (373)
Q Consensus 101 ~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~ 180 (373)
....+.+.+..+-+++.+.++-+.|..+..+++..+..+|+++.+..|... .++-+..|+.+.-+|.++.|+-.-+
T Consensus 133 PtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~----sPNF~~~Gv~mIsgALl~DA~iGNv 208 (367)
T KOG1582|consen 133 PTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQT----SPNFNLIGVMMISGALLADAVIGNV 208 (367)
T ss_pred cHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccccc----CCCcceeeHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999999999999999999977543 2445578999999999999999999
Q ss_pred HHHHhccCC--hhHHHHHHHHHHHHHHHHHHHHhhcccccccc----ccccchhHHHHHHHHHHHHHHHHHHHHhhcchh
Q 017343 181 EEFLVKKAD--RIELMAFLGLFGGIISAVQISILERKELQSIH----WSAGAALPFFGYALAMFLFYSFVPILLKTNGAT 254 (373)
Q Consensus 181 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 254 (373)
+++.++..+ ..++.++.+.+|.++++.+..+.+.. ++.++ -++......+...++.+.........++..++.
T Consensus 209 QEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~-f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~ 287 (367)
T KOG1582|consen 209 QEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGEL-FSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGAL 287 (367)
T ss_pred HHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccc-hhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchh
Confidence 999887554 56788999999999887776554432 22221 112123333333444444445555667899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343 255 MLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 255 ~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
++..+...+..+++++++++|..++|....-|..+++.|+++..+.+
T Consensus 288 ~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 288 IAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 99999999999999999999999999999999999999999987765
No 30
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.55 E-value=1.5e-14 Score=122.59 Aligned_cols=274 Identities=14% Similarity=0.119 Sum_probs=202.3
Q ss_pred HHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHh-cccCccchHHHHHHHHHHHHHHHHHHHHHhc-cchhHHH
Q 017343 27 TSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYR-RQPLKAKWYYYLILGLIDVEGNFLVVKAYQY-TSLTSVM 104 (373)
Q Consensus 27 ~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~-~~~~~~~ 104 (373)
|+.-.....+.+....+-..+++..+++-+.--+++.-.- ..+++.+.+.+++.-..-+..+.+.++|+++ ++...-.
T Consensus 16 csnvv~lE~L~~~~pgsgNLITFaqFlFia~eGlif~skf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHi 95 (330)
T KOG1583|consen 16 CSNVVFLELLVRNEPGSGNLITFAQFLFIATEGLIFTSKFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLHI 95 (330)
T ss_pred hchHHHHHHHHHhCCCCeeehHHHHHHHHHHhceeeeccccccCCCCchhhhheehheeeeeeeeccceeeecccceEEE
Confidence 3344445555554444456778887776665544443111 1346666777777666656669999999998 7888888
Q ss_pred HhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCC---C--------CCCCCchhhHHHHHHHHH
Q 017343 105 LLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDR---G--------SGSSPRKGDALVIAGATL 173 (373)
Q Consensus 105 ~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~---~--------~~~~~~~G~~l~l~a~~~ 173 (373)
++.+.+++.+++++++++|+|.+.+|+.++++..+|+++.+......... + ......+|+.+...+.+.
T Consensus 96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~ 175 (330)
T KOG1583|consen 96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL 175 (330)
T ss_pred EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999988744322211 0 112236899999999999
Q ss_pred HHHHHHHHHHHhccC--ChhHHHHHHHHHHHHHHHHHHH--------Hhhcc--ccccccc-cccchhHHHHHHHHHHHH
Q 017343 174 YAVSNVSEEFLVKKA--DRIELMAFLGLFGGIISAVQIS--------ILERK--ELQSIHW-SAGAALPFFGYALAMFLF 240 (373)
Q Consensus 174 ~a~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (373)
.|...++++...++. ++-+.++|.........+...- ....+ ..+.... -+..+..++..++.++.+
T Consensus 176 sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~C 255 (330)
T KOG1583|consen 176 SAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFC 255 (330)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHH
Confidence 999999999888765 4778999988887755432110 00000 1111111 133355677788888888
Q ss_pred HHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343 241 YSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300 (373)
Q Consensus 241 ~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 300 (373)
..+...+....++..++++..++..++.+++++.|..+++++.|+|++++..|.+++...
T Consensus 256 ikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 256 IKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred HHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 888888889999999999999999999999999999999999999999999999998753
No 31
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.48 E-value=2.3e-13 Score=111.85 Aligned_cols=264 Identities=12% Similarity=0.069 Sum_probs=197.3
Q ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHhc-ccCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHH
Q 017343 40 GINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLT 118 (373)
Q Consensus 40 ~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~ 118 (373)
++.--+.+.+.+.+...+-+..+-+.+- .....+.+.++...++.....+..-.+++|.++..+++..+++.+.++...
T Consensus 33 gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR~t~aK~WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygE 112 (309)
T COG5070 33 GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFRLTKAKKWFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGE 112 (309)
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhHhheehhhhhhhcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhH
Confidence 6665667777777766665555433332 222445556677777777766777799999999999999999999999999
Q ss_pred HHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccC--ChhHHHHH
Q 017343 119 WIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKA--DRIELMAF 196 (373)
Q Consensus 119 ~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~--~~~~~~~~ 196 (373)
..++|.|.+-....+.++.++.-+...++|.+.... .....+.|.++...-++..+.+....|+..+-. .....++|
T Consensus 113 vl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~-~~~~lN~GY~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfY 191 (309)
T COG5070 113 VLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAF-KAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFY 191 (309)
T ss_pred HHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHH-HhcccCCceEEEehhhHhHHHHHHHHHHhhcccccchhhHHHH
Confidence 999999999999999999888888888876532111 122446899999999999999999999876533 36678999
Q ss_pred HHHHHHHHHHHHHHHhhcccccc--ccccccchhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 017343 197 LGLFGGIISAVQISILERKELQS--IHWSAGAALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGA 274 (373)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~ 274 (373)
..+.+..++.....++|.+.... .+.........+..+++.+.--++..+..+..+++..++++.++..-..+.|.++
T Consensus 192 nNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvf 271 (309)
T COG5070 192 NNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVF 271 (309)
T ss_pred hhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhh
Confidence 99999999888888877653321 1222223223333333333333444556789999999999999999999999999
Q ss_pred hcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343 275 YHEKVDWLYFIAFAAVAVGLIIYSGGDKDD 304 (373)
Q Consensus 275 ~~e~~~~~~~~G~~li~~g~~l~~~~~~~~ 304 (373)
|+|+.+...+....+-..+.++|...+.++
T Consensus 272 fdap~nf~si~sillGflsg~iYavaks~k 301 (309)
T COG5070 272 FDAPVNFLSIFSILLGFLSGAIYAVAKSKK 301 (309)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888888888765443
No 32
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.47 E-value=5.1e-13 Score=100.26 Aligned_cols=129 Identities=16% Similarity=0.205 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc------ccCccchHHHHHHHHHHHHHHH
Q 017343 16 LGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR------QPLKAKWYYYLILGLIDVEGNF 89 (373)
Q Consensus 16 ~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~ 89 (373)
++.+++.+++++..-.+.|.-.+ ..+|.+.++.|.....+++..++...+ ...++.|....+.|+.+..+..
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHH
Confidence 45666777788777777776553 557899999999999888888776655 2356777777788888888899
Q ss_pred HHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 90 LVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 90 ~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
+||.|++...++.+..+..++|+++++++++++|||++..+|+|+.++.+|++++..
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999999999999999998864
No 33
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.46 E-value=1.9e-14 Score=121.85 Aligned_cols=268 Identities=12% Similarity=0.063 Sum_probs=194.8
Q ss_pred HHhhHHHHhc---cCCCcHHHHHHHHHHHHHHHHHHHHHhc------cc-----CccchHHHHHHHHHHHHHHHHHHHHH
Q 017343 30 GFSSSELARK---GINAPTSQSFFNYVLLAIVYGSLMLYRR------QP-----LKAKWYYYLILGLIDVEGNFLVVKAY 95 (373)
Q Consensus 30 ~~~~~~l~~~---~~~~p~~~~~~r~~~~~~~l~~~~~~~~------~~-----~~~~~~~~~~~g~~~~~~~~~~~~al 95 (373)
-+.+|.+... ..+.|.+++++..++...+...+-+... .. .-+..+....+.++-+.+..+.++.+
T Consensus 44 vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVfi~mI~fnnlcL 123 (347)
T KOG1442|consen 44 VFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVFILMISFNNLCL 123 (347)
T ss_pred hhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhheeeeehhccceeh
Confidence 3445655443 5678999999999888877766533221 11 11222345555666555566777899
Q ss_pred hccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHH
Q 017343 96 QYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYA 175 (373)
Q Consensus 96 ~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a 175 (373)
+|++++.+.+=.++..+|+++++++++|+|-+..-..++.+++.|..+=.-.++. .+.-...|.++++.+.++-|
T Consensus 124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~-----~~~ls~~GvifGVlaSl~vA 198 (347)
T KOG1442|consen 124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGS-----TGTLSWIGVIFGVLASLAVA 198 (347)
T ss_pred hhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccc-----cCccchhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988888888887665432211 13345799999999999999
Q ss_pred HHHHHHHHHhccCC--hhHHHHHHHHHHHHHHHHHHHHhhcc-cccc--ccccccchhHHHHHHHHHHHHHHHHHHHHhh
Q 017343 176 VSNVSEEFLVKKAD--RIELMAFLGLFGGIISAVQISILERK-ELQS--IHWSAGAALPFFGYALAMFLFYSFVPILLKT 250 (373)
Q Consensus 176 ~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (373)
+..++.||.....+ -+.+++|..+.+.++.+|...+.+.. .... ..+....|......++..+..++.-..=++.
T Consensus 199 lnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK~ 278 (347)
T KOG1442|consen 199 LNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIKV 278 (347)
T ss_pred HHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEEe
Confidence 99999998765443 56788999999988887766554432 1111 1233344444333334333333333333688
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 251 NGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 251 ~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
++|.+.++....+-..-.+++..+++|.-+..-|.|-++++.|...|++.++
T Consensus 279 TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~ 330 (347)
T KOG1442|consen 279 TSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE 330 (347)
T ss_pred cccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999988553
No 34
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.44 E-value=1.9e-12 Score=104.62 Aligned_cols=217 Identities=17% Similarity=0.206 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCC
Q 017343 79 ILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGS 158 (373)
Q Consensus 79 ~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~ 158 (373)
...++....|+.+..|++.++++.++.+..+.-.|+.+++++.+|+|+...++++.++++.|++++...|-+ +.
T Consensus 58 PF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~------~a 131 (290)
T KOG4314|consen 58 PFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE------HA 131 (290)
T ss_pred ceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch------hh
Confidence 334455566999999999999999999999999999999999999999999999999999999999976643 55
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhccCCh---hHHHHHHHHHHHHHHHHHHHHhhcccccccc-ccccchhHHHHHH
Q 017343 159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADR---IELMAFLGLFGGIISAVQISILERKELQSIH-WSAGAALPFFGYA 234 (373)
Q Consensus 159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (373)
+.+.|+.+++.+++..++|.+..|+...+.+- ...+.....+...+...+.++......++.+ .....|.-+.|..
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA~~PWG~l~G~A 211 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFAAAPWGCLCGAA 211 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHhhCCchhhhhHH
Confidence 67899999999999999999999998876653 2334444444444443333333322233222 2222234444444
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343 235 LAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
.-...++...........+...++-+....+.....+.++-+-..+....+|..++++|.++....+
T Consensus 212 ~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 212 GLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred HHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 4455666666666677888888888777788888899987777789999999999999999887644
No 35
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.37 E-value=3.2e-11 Score=98.63 Aligned_cols=137 Identities=21% Similarity=0.228 Sum_probs=116.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcc-------CChhHHHHHHHHHHHHHHHHHHHHhhccccccccc---------cccc
Q 017343 163 GDALVIAGATLYAVSNVSEEFLVKK-------ADRIELMAFLGLFGGIISAVQISILERKELQSIHW---------SAGA 226 (373)
Q Consensus 163 G~~l~l~a~~~~a~~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 226 (373)
|.++++.+.++.+++.++.|+..++ .++..+..+....+.+++.+...+.|+........ ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 6789999999999999999998765 36889999999999999999888887764221111 2233
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 227 ALPFFGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
+..++..++..+.++......+++.++...++...++.+..++.++++++|++|..+++|.++.+.|+++|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 3445556677788889999999999999999999999999999999999999999999999999999999975
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.35 E-value=2.8e-11 Score=90.97 Aligned_cols=136 Identities=15% Similarity=0.024 Sum_probs=104.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 017343 163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYS 242 (373)
Q Consensus 163 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (373)
-.++++++++++++..++.|-..++.||...+....+...+++............. -..+...+..+...+++...-+.
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~-~~~~~k~~lflilSGla~glswl 82 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAG-GEIGPKSWLFLILSGLAGGLSWL 82 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecc-cccCcceehhhhHHHHHHHHHHH
Confidence 45789999999999999999999999999999999988888876655544433221 11223333333333344333345
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 243 FVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 243 ~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
+.+++++...+..+....-++|++++++++++++|++|..+++|+++|++|.++...
T Consensus 83 ~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 83 LYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 556667888899888888889999999999999999999999999999999998764
No 37
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.32 E-value=2.4e-10 Score=99.63 Aligned_cols=244 Identities=13% Similarity=0.128 Sum_probs=163.6
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhcccC---ccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcch-hhHHHHHH
Q 017343 43 APTSQSFFNYVLLAIVYGSLMLYRRQPL---KAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWT-IPCVMFLT 118 (373)
Q Consensus 43 ~p~~~~~~r~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~-p~~~~ll~ 118 (373)
+|....+--.+-+.++-+.....+++.. ...+..-++.|++...++.+.+.|+++..++.+.++.... .+.+.+++
T Consensus 11 ~~~~Q~lG~t~Gali~alv~~~~~~p~~~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~g 90 (269)
T PF06800_consen 11 KPANQILGTTIGALIFALVVFLFRQPAFSMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIG 90 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHH
Confidence 4555554444444444333333343222 2556666777888888899999999999999999998544 45577999
Q ss_pred HHHhccccceeeee----hhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHH
Q 017343 119 WIFLKTKYRYKKIT----GVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELM 194 (373)
Q Consensus 119 ~~~l~e~~~~~~~~----~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~ 194 (373)
.++++|..+..+++ ++++.++|+.+....+...+..+...+...|....+.+.+.|..|.+..|. .+.+++...
T Consensus 91 v~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~ 168 (269)
T PF06800_consen 91 VLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAF 168 (269)
T ss_pred HhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhH
Confidence 99999988877764 778889999999887765443223445567999999999999999999775 457777776
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccccccchhHHHH--HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Q 017343 195 AFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFG--YALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRI 272 (373)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~ 272 (373)
.-+.+-..+...+...+.+.....+..|. ..+.| ..++.+.++... +..+....-....+.++++.+.++
T Consensus 169 lPqaiGm~i~a~i~~~~~~~~~~~k~~~~----nil~G~~w~ignl~~~is~----~~~G~a~af~lSQ~~vvIStlgGI 240 (269)
T PF06800_consen 169 LPQAIGMLIGAFIFNLFSKKPFFEKKSWK----NILTGLIWGIGNLFYLISA----QKNGVATAFTLSQLGVVISTLGGI 240 (269)
T ss_pred HHHHHHHHHHHHHHhhcccccccccchHH----hhHHHHHHHHHHHHHHHhH----HhccchhhhhHHhHHHHHHHhhhh
Confidence 66654444333333322221111112221 22222 223333333333 677777777777788999999999
Q ss_pred HHhcccccHH----HHHHHHHHHHHhhe
Q 017343 273 GAYHEKVDWL----YFIAFAAVAVGLII 296 (373)
Q Consensus 273 ~~~~e~~~~~----~~~G~~li~~g~~l 296 (373)
+++||+=+.+ .++|.++++.|.++
T Consensus 241 ~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 241 FILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred eEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 9999997755 45688989888765
No 38
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.20 E-value=1.2e-10 Score=91.50 Aligned_cols=125 Identities=22% Similarity=0.299 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 017343 172 TLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTN 251 (373)
Q Consensus 172 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (373)
++||.+.+..|+..++.|+...+.+.+..+.+ ..+.....+..+....+........+.+. ++....+.......++.
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~~ 78 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGL-LGTALAYLLYFYALKYI 78 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhc-cceehHHHHHHHHHHhc
Confidence 47899999999999999999999999999997 55555555443322222222222222222 21223334445556999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 252 GATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 252 ~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
++...++...++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus 79 ~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 79 SASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998653
No 39
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.18 E-value=1.8e-11 Score=96.40 Aligned_cols=119 Identities=24% Similarity=0.444 Sum_probs=97.1
Q ss_pred HHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-----ccCccchHHHHHHHHHH-HHHHHHHHHHHhc
Q 017343 24 LLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-----QPLKAKWYYYLILGLID-VEGNFLVVKAYQY 97 (373)
Q Consensus 24 l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~g~~~-~~~~~~~~~al~~ 97 (373)
++|+......|...++ .+|...+++|+..+.+ ++++..... ...++.+......+.++ ...+.+++.++++
T Consensus 1 ~~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 77 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKY 77 (126)
T ss_pred ceeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHh
Confidence 4678888888888763 6789999999999996 444433222 33445566667777775 5558899999999
Q ss_pred cchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeee
Q 017343 98 TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVI 145 (373)
Q Consensus 98 ~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~ 145 (373)
.+++.++++.++.|+++.+++++++||++++++++|+++++.|++++.
T Consensus 78 ~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 78 ISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999987753
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.17 E-value=4e-11 Score=92.55 Aligned_cols=100 Identities=18% Similarity=0.443 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHHHhc-------ccCccchHHHHHHHHHHH-HHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHH
Q 017343 49 FFNYVLLAIVYGSLMLYRR-------QPLKAKWYYYLILGLIDV-EGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWI 120 (373)
Q Consensus 49 ~~r~~~~~~~l~~~~~~~~-------~~~~~~~~~~~~~g~~~~-~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~ 120 (373)
.+|+..+.+++..+...++ ...++++......|+++. ..+.+++.|+++.+ +.++++.+++|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 4788888888877655543 122355556666688877 55888889999999 58889999999999999999
Q ss_pred HhccccceeeeehhhhheecceeeeeccC
Q 017343 121 FLKTKYRYKKITGVVVCVAGLVTVIFSDV 149 (373)
Q Consensus 121 ~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~ 149 (373)
++|||++++++++++++++|++++..++.
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999998765
No 41
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.15 E-value=3.8e-10 Score=98.22 Aligned_cols=200 Identities=12% Similarity=0.038 Sum_probs=111.8
Q ss_pred HHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHH
Q 017343 92 VKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGA 171 (373)
Q Consensus 92 ~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~ 171 (373)
+.++.+..+...... ....+.++++....++.+.+..+|.++.....|+......+.. .......+...|..+.+.++
T Consensus 17 ~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~-~~~~~~g~~~~g~~~~l~a~ 94 (222)
T TIGR00803 17 LIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSS-AKTLMFGNPVVGLSAVLSAL 94 (222)
T ss_pred HHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCC-ccccccccHHHHHHHHHHHH
Confidence 333333333333333 3344444444444444444444444444444444444332211 00111234567888889999
Q ss_pred HHHHHHHHHHHHHhccCCh--hHHHHHHHHHHHHHHHHHHHHhhccccccc----cccccchhHHHHHHHHHHHHHHHHH
Q 017343 172 TLYAVSNVSEEFLVKKADR--IELMAFLGLFGGIISAVQISILERKELQSI----HWSAGAALPFFGYALAMFLFYSFVP 245 (373)
Q Consensus 172 ~~~a~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (373)
++.++..++.++..++.+. +..+....+++.+.........+....... .++...+...+... ....+..
T Consensus 95 ~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a----~~~~~v~ 170 (222)
T TIGR00803 95 LSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVGLLNV----GGGLCIG 170 (222)
T ss_pred HHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHHHHHH----hcCceee
Confidence 9999999999998765432 222222233333322121111111111111 11222222222111 2223355
Q ss_pred HHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhee
Q 017343 246 ILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIY 297 (373)
Q Consensus 246 ~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~ 297 (373)
..+++.++...++...++++++.++++++|||+++..+++|+.+++.|+++|
T Consensus 171 ~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 171 GVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred ehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 6679999999999999999999999999999999999999999999998775
No 42
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.03 E-value=2.2e-09 Score=95.84 Aligned_cols=132 Identities=18% Similarity=0.186 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---ccCccchHHHHHHHHHHHH-
Q 017343 11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---QPLKAKWYYYLILGLIDVE- 86 (373)
Q Consensus 11 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~g~~~~~- 86 (373)
....+.++++..+++|+......|...+.....+.....+++.++.+++.++..... ......|...+..++++..
T Consensus 125 ~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 125 INPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGLIGTAL 204 (260)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHH
Confidence 346788888999999999999999887532222445555788888888887765543 1223344445666776654
Q ss_pred HHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecce
Q 017343 87 GNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLV 142 (373)
Q Consensus 87 ~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ 142 (373)
+..+++.++++.+++.++++.++.|++++++++++++|+++..+++|+.+.++|+.
T Consensus 205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 48889999999999999999999999999999999999999999999999998863
No 43
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.97 E-value=1.5e-08 Score=91.45 Aligned_cols=269 Identities=13% Similarity=0.121 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHH-HHHHH
Q 017343 10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLI-DVEGN 88 (373)
Q Consensus 10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~ 88 (373)
+....|+.+.+..+++.+....+.|....+....+. |..-. ...++ .+..|+ .|++ ...+.
T Consensus 3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~-----~~~~~---~~~~l------~~~~W~----~G~~~~~~g~ 64 (300)
T PF05653_consen 3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSL-----RAGSG---GRSYL------RRPLWW----IGLLLMVLGE 64 (300)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-----cccch---hhHHH------hhHHHH----HHHHHHhcch
Confidence 345667788888778877777777765433111000 00000 00000 011222 2332 33447
Q ss_pred HHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCC--------CC
Q 017343 89 FLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGS--------SP 160 (373)
Q Consensus 89 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~--------~~ 160 (373)
.+.+.|+.+.|.+..+++..+..++..+++..++|||++++.+.|+.++++|..++.......++..... ..
T Consensus 65 ~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~~~~~~~~ 144 (300)
T PF05653_consen 65 ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELIALLSQPG 144 (300)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHHHHhcCcc
Confidence 7888999999999999999999999999999999999999999999999999998776443222111000 00
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH----HHHHH---hhccccccccccccchhHHHHH
Q 017343 161 RKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISA----VQISI---LERKELQSIHWSAGAALPFFGY 233 (373)
Q Consensus 161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (373)
.+-.. .+...+...+.....+|.. +.+.........++++.... +...+ .++. .++ ..+..+..++..
T Consensus 145 fl~y~-~~~~~~~~~L~~~~~~r~g-~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~--~~f-~~~~~y~l~~~~ 219 (300)
T PF05653_consen 145 FLVYF-ILVLVLILILIFFIKPRYG-RRNILVYISICSLIGSFTVLSAKAISILIKLTFSGD--NQF-TYPLTYLLLLVL 219 (300)
T ss_pred eehhH-HHHHHHHHHHHHhhcchhc-ccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc--hhh-hhhHHHHHHHHH
Confidence 11111 1111122222222222221 22222111112222221111 00011 1111 111 112223333333
Q ss_pred HHHHHHHHHHHHHHHhhcchhHHHH-HHHHHHHHHHHHHHHHhccc--ccH----HHHHHHHHHHHHhheeecCC
Q 017343 234 ALAMFLFYSFVPILLKTNGATMLNL-SLLTSDMWAVLIRIGAYHEK--VDW----LYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~~~~e~--~~~----~~~~G~~li~~g~~l~~~~~ 301 (373)
..+.........+.+++.++..+.. ....-...+++-|.++|+|. .+. ...+|..++++|+++....+
T Consensus 220 v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~~~~ 294 (300)
T PF05653_consen 220 VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLSSSK 294 (300)
T ss_pred HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheeeccC
Confidence 4444444445566667776665543 34455778888899999976 444 34678999999999987644
No 44
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.93 E-value=3.9e-08 Score=89.42 Aligned_cols=139 Identities=10% Similarity=0.110 Sum_probs=101.6
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhcc-ccccccccccchhHHHHHHHHH
Q 017343 159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERK-ELQSIHWSAGAALPFFGYALAM 237 (373)
Q Consensus 159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 237 (373)
+...|+++.++++++|+...+..|.. .+.+|.+..++...++.+++.+........ ...+...+...+......++..
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLI 83 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 34589999999999999999999764 678999999999999988775554332211 0000000111111111222223
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 238 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
...+.+....+++.++...++..++.|+++.++++++++|+++..+++|+++.++|+++..
T Consensus 84 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 84 GGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 3334455566699999999999999999999999999999999999999999999998765
No 45
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.87 E-value=9.5e-08 Score=85.06 Aligned_cols=136 Identities=11% Similarity=0.164 Sum_probs=98.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccc--cccccc-cc-cchhHHHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKE--LQSIHW-SA-GAALPFFGYALAM 237 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~-~~~~~~~~~~~~~ 237 (373)
.|.++.++++++|+...+..|. ..+.||.+..++.++++++++.+......... .++... .. .....+...++..
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 80 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLI 80 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHH
Confidence 4889999999999999999997 56799999999999999887655443332110 011111 11 1111111112223
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 238 FLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 238 ~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
..++.+.....++.++..+++..++.|+++.++++++++|+++.++++|.++.++|+++..
T Consensus 81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 3333444555688999999999999999999999999999999999999999999998754
No 46
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.85 E-value=9.9e-08 Score=86.16 Aligned_cols=132 Identities=11% Similarity=0.020 Sum_probs=92.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhh-ccccccccccccchhHHHHHHHHHHHHHH
Q 017343 164 DALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILE-RKELQSIHWSAGAALPFFGYALAMFLFYS 242 (373)
Q Consensus 164 ~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (373)
.++.++++++++...++.|+..++.++.. .+....++++..+...... ...++..+..+ +......++....++.
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDFL--WWALLAHSVLLTPYGLWYLAQVGWSRLPATF--WLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHHH--HHHHHHHHHHHHHHHHHhcccCCCCCcchhh--HHHHHHHHHHHHHHHH
Confidence 46889999999999999998887765543 4444555555544443221 11111111111 2222223333445555
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 243 FVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 243 ~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
......++.++...+...++.|+++.++++++++|+++.++++|+++++.|+++...
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 666677999999999999999999999999999999999999999999999987654
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.70 E-value=1.1e-07 Score=88.16 Aligned_cols=135 Identities=13% Similarity=0.147 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCcc------chH--HHHHHHHHH
Q 017343 13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKA------KWY--YYLILGLID 84 (373)
Q Consensus 13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~------~~~--~~~~~g~~~ 84 (373)
..|.++.+..+++|+......+...+ ++.++...+++...+..+.+.+........... ... ..+..++..
T Consensus 188 ~lG~~l~l~aa~~wa~~~il~~~~~~-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~y~~i~t 266 (358)
T PLN00411 188 LIGGALLTIQGIFVSVSFILQAHIMS-EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDITLITIVTMAIIT 266 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchHHHHHHHHHHHH
Confidence 45777788888899888888887654 344445556666665555444332221111111 111 122233333
Q ss_pred HHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343 85 VEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD 148 (373)
Q Consensus 85 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 148 (373)
..+..++++++++.+++.+++..++.|++.+++++++++|+++..+++|.+++++|+.++....
T Consensus 267 ~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~ 330 (358)
T PLN00411 267 SVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGK 330 (358)
T ss_pred HHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhh
Confidence 3347778899999999999999999999999999999999999999999999999999988643
No 48
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.68 E-value=6.2e-10 Score=93.42 Aligned_cols=272 Identities=14% Similarity=0.102 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-ccCccchHHHHHHHHHHHHHHHHHH
Q 017343 14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QPLKAKWYYYLILGLIDVEGNFLVV 92 (373)
Q Consensus 14 ~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~ 92 (373)
..++++++-++.|++...++.... ..|..++.--.+-+.++-+...+... ......+..-++.|++..+++...+
T Consensus 2 ~~~liaL~P~l~WGsip~v~~k~G----G~p~qQ~lGtT~GALifaiiv~~~~~p~~T~~~~iv~~isG~~Ws~GQ~~Qf 77 (288)
T COG4975 2 MDLLIALLPALGWGSIPLVANKFG----GKPYQQTLGTTLGALIFAIIVFLFVSPELTLTIFIVGFISGAFWSFGQANQF 77 (288)
T ss_pred hhHHHHHHHHHHhcccceeeeecC----CChhHhhhhccHHHHHHHHHHheeecCccchhhHHHHHHhhhHhhhhhhhhh
Confidence 356777888889998887766542 35666665554444444444333333 3333444455566777777899999
Q ss_pred HHHhccchhHHHHhhcchhhHHH-HHHHHHhccccceeee----ehhhhheecceeeeeccCccCCCCCCCCCchhhHHH
Q 017343 93 KAYQYTSLTSVMLLDCWTIPCVM-FLTWIFLKTKYRYKKI----TGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALV 167 (373)
Q Consensus 93 ~al~~~~~~~~~~i~~~~p~~~~-ll~~~~l~e~~~~~~~----~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~ 167 (373)
.|.++.+++.+.++..-.-+.-. +++.+.++|..+..+. +++++.+.|+.+-...+.+..+.+..++.-.|....
T Consensus 78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L 157 (288)
T COG4975 78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVIL 157 (288)
T ss_pred hheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeee
Confidence 99999999999999877666655 9999999998888764 678888999999999776444444556666899999
Q ss_pred HHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhc-cccccccccccchhHHHHHHHHHHHHHHHHHH
Q 017343 168 IAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILER-KELQSIHWSAGAALPFFGYALAMFLFYSFVPI 246 (373)
Q Consensus 168 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (373)
+.+.+.|-.|.+..+... .+.+....-+.. +.++..+..-.... .......|........ ...+...+..+.
T Consensus 158 ~iSt~GYv~yvvl~~~f~--v~g~saiLPqAi-GMv~~ali~~~~~~~~~~~K~t~~nii~G~~--Wa~GNl~ml~a~-- 230 (288)
T COG4975 158 LISTLGYVGYVVLFQLFD--VDGLSAILPQAI-GMVIGALILGFFKMEKRFNKYTWLNIIPGLI--WAIGNLFMLLAA-- 230 (288)
T ss_pred eeeccceeeeEeeecccc--ccchhhhhHHHH-HHHHHHHHHhhcccccchHHHHHHHHhhHHH--HHhhHHHHHHhh--
Confidence 999999999999887643 444443333322 22222222222221 1111222211111111 111122221222
Q ss_pred HHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHH----HHHHHHHHHHhheee
Q 017343 247 LLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLY----FIAFAAVAVGLIIYS 298 (373)
Q Consensus 247 ~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~----~~G~~li~~g~~l~~ 298 (373)
+..+..+.-....+..+++.+-++++++|+=|..+ ++|.++++.|.++..
T Consensus 231 --~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 231 --QKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred --hhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 23333332223334488889999999999988776 468888888877654
No 49
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.67 E-value=1e-06 Score=80.19 Aligned_cols=133 Identities=11% Similarity=0.065 Sum_probs=96.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHH--HHHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPF--FGYALAMFL 239 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 239 (373)
.+.+++++++++|+...+..|...++.+|....++.+..+.+++.+.. ..+..... ....... ++......+
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~~~~P~~~~~~R~~~a~l~l~~~~---~~~~~~~~---~~~~~~~~~l~~~~~~~~ 77 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSESLGPVGGAAMIYSVSGLLLLLTV---GFPRLRQF---PKRYLLAGGLLFVSYEIC 77 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHccCChHHHHHHHHHHHHHHHHHHc---cccccccc---cHHHHHHHhHHHHHHHHH
Confidence 567889999999999999999999999999999999999888775432 11111111 1111111 111112222
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343 240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300 (373)
Q Consensus 240 ~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 300 (373)
++....+.....++...++..++.|+++.++++++++|+++..+++|+++.++|+++....
T Consensus 78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~ 138 (295)
T PRK11689 78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGG 138 (295)
T ss_pred HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecC
Confidence 3333333335567778888899999999999999999999999999999999999887753
No 50
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.65 E-value=2.2e-07 Score=84.34 Aligned_cols=133 Identities=11% Similarity=-0.013 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcc---cCccchHHHHHHHHHHHHH-H
Q 017343 13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ---PLKAKWYYYLILGLIDVEG-N 88 (373)
Q Consensus 13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~g~~~~~~-~ 88 (373)
..|.++++..+++|+......|...+ ..+|...... ..++.+++.++...... .....+...+..|++.... +
T Consensus 147 ~~G~ll~l~aa~~~a~~~v~~r~~~~--~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t~~~~ 223 (293)
T PRK10532 147 LTGAALALGAGACWAIYILSGQRAGA--EHGPATVAIG-SLIAALIFVPIGALQAGEALWHWSILPLGLAVAILSTALPY 223 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhc--cCCchHHHHH-HHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 45788888888999988888887754 2345555444 34555556555444321 1112222335667766655 7
Q ss_pred HHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343 89 FLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD 148 (373)
Q Consensus 89 ~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 148 (373)
.++++++++.+++.++++.++.|++..++++++++|+++..+++|..+.++|++......
T Consensus 224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 788999999999999999999999999999999999999999999999999998886644
No 51
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.63 E-value=1.5e-07 Score=85.45 Aligned_cols=132 Identities=11% Similarity=-0.090 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-c----cCccchHHHHHHHHHHHHH
Q 017343 13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-Q----PLKAKWYYYLILGLIDVEG 87 (373)
Q Consensus 13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~----~~~~~~~~~~~~g~~~~~~ 87 (373)
..|.++++..+++|+......|...+ .++...+.+.+.++.+.+.++..... . .....|......++++...
T Consensus 149 ~~G~l~~l~a~~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~ 225 (292)
T PRK11272 149 PWGAILILIASASWAFGSVWSSRLPL---PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSII 225 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCC---CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 45777777778888877777776542 22455667777777777766644332 1 1234455666667765544
Q ss_pred -HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeec
Q 017343 88 -NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFS 147 (373)
Q Consensus 88 -~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~ 147 (373)
..+++.++++.+++.++++.++.|++.+++++++++|+++..+++|.++.+.|+++....
T Consensus 226 ~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 226 AISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999999999999999999999999887653
No 52
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.61 E-value=8.4e-07 Score=78.04 Aligned_cols=215 Identities=14% Similarity=0.177 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCC----
Q 017343 84 DVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSS---- 159 (373)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~---- 159 (373)
...+..+.|.|+.+.|++..+.+..++.+..++++..+++||++....+|+.++++|-.+++.......+.....+
T Consensus 74 m~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~~~ 153 (335)
T KOG2922|consen 74 MIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVWEL 153 (335)
T ss_pred HHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHHHH
Confidence 3444888899999999999999999999999999999999999999999999999999999875543222110000
Q ss_pred -CchhhH-HHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHH----HHH---HHhhccccccccccccchhHH
Q 017343 160 -PRKGDA-LVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISA----VQI---SILERKELQSIHWSAGAALPF 230 (373)
Q Consensus 160 -~~~G~~-l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~ 230 (373)
...+.+ +...-.+...+-....+..-...++..+...+.+.|++-.. +.. ..+.+. .+...+ ..+..+
T Consensus 154 ~~~~~Fliy~~~iil~~~il~~~~~p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~--~ql~~~-~ty~~~ 230 (335)
T KOG2922|consen 154 ATEPGFLVYVIIIILIVLILIFFYAPRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN--NQLFYP-LTWIFL 230 (335)
T ss_pred hcCccHHHHHHHHHHHHHHHheeecccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC--cccccH-HHHHHH
Confidence 001111 01111111111111111111122334444444444422110 000 111111 111111 223333
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHH-HHHHHHHHHHHHHHHHHhcccc--c----HHHHHHHHHHHHHhheeecCC
Q 017343 231 FGYALAMFLFYSFVPILLKTNGATMLN-LSLLTSDMWAVLIRIGAYHEKV--D----WLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~a~~~~-~~~~~~pv~~~l~~~~~~~e~~--~----~~~~~G~~li~~g~~l~~~~~ 301 (373)
+....+.........++++...+..+. +...+-..++++.+.++|.|.- + ....+|...++.|+++....+
T Consensus 231 l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~flL~~~k 308 (335)
T KOG2922|consen 231 LVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIFLLHRTK 308 (335)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheeeEeeeec
Confidence 333333333334445555666665555 4455667888899999998763 3 335789999999999986543
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.60 E-value=2.4e-06 Score=66.92 Aligned_cols=122 Identities=15% Similarity=0.063 Sum_probs=83.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (373)
.|.++.+.+.++.+..+++.|+-.++.+....... . ... ... .. +...+.+..+.+.++++++|+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~-~~~----~~~-~~--------~p~~~i~lgl~~~~la~~~w~ 66 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-F-IAA----LLA-FG--------LALRAVLLGLAGYALSMLCWL 66 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-H-HHH----HHH-Hh--------ccHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999998876654332211 0 000 000 10 000122344455555565554
Q ss_pred HHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH--HhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 242 SFVPILLKTNGATMLNLSLLTSDMWAVLIRIG--AYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 242 ~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~--~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
.. +++.+...+.......+++..+.++. ++||++|+.+++|+++|++|+++.+++++
T Consensus 67 ~a----L~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 67 KA----LRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HH----HHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 44 48888888888777777778777774 79999999999999999999999876443
No 54
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.59 E-value=1.1e-05 Score=73.58 Aligned_cols=284 Identities=13% Similarity=0.054 Sum_probs=157.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHH----HHHhc------ccCccchHHHHHH
Q 017343 11 KTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSL----MLYRR------QPLKAKWYYYLIL 80 (373)
Q Consensus 11 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~----~~~~~------~~~~~~~~~~~~~ 80 (373)
+...|++...+..+||++.+...|. .+. -+++..+.-..+..-++.++ +..+. ..+...+..-++.
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~ 79 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF 79 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCC---CchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence 4566888888899999999888887 332 12222211111111111221 11111 2344555566677
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHhh-cchhhHHHHHHHHHhcccc---cee----eeehhhhheecceeeee----cc
Q 017343 81 GLIDVEGNFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFLKTKY---RYK----KITGVVVCVAGLVTVIF----SD 148 (373)
Q Consensus 81 g~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~l~e~~---~~~----~~~~~~l~~~Gv~l~~~----~~ 148 (373)
|++-..++..++.++++..++.+..+. .++.+...++..++++|-. +.. -.+|++++++|+++... .+
T Consensus 80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~ 159 (345)
T PRK13499 80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE 159 (345)
T ss_pred HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 888888899999999999999987764 4566677788999988754 322 45788889999999887 44
Q ss_pred CccCCC-CCCCCCchhhHHHHHHHHHHHHHH-------HHHHHHh-ccCChhHHHHHHHH---HHHHHHHHHHHHh---h
Q 017343 149 VHAGDR-GSGSSPRKGDALVIAGATLYAVSN-------VSEEFLV-KKADRIELMAFLGL---FGGIISAVQISIL---E 213 (373)
Q Consensus 149 ~~~~~~-~~~~~~~~G~~l~l~a~~~~a~~~-------v~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~ 213 (373)
....++ +...+...|+++++++.+.+++|. ...+... ...++......+.. .+.++.-...... .
T Consensus 160 ~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~k 239 (345)
T PRK13499 160 RKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLAK 239 (345)
T ss_pred cccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 321111 223456789999999999999999 4443321 22343332222222 3333222211121 1
Q ss_pred ccccc-cccccc----cchhHHHHHHHHHHHHHH---HHHHHHhhc---chhH-HHHHHHHHHHHHHHHHHHHhccccc-
Q 017343 214 RKELQ-SIHWSA----GAALPFFGYALAMFLFYS---FVPILLKTN---GATM-LNLSLLTSDMWAVLIRIGAYHEKVD- 280 (373)
Q Consensus 214 ~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~a~~-~~~~~~~~pv~~~l~~~~~~~e~~~- 280 (373)
....+ ..+... .....+++ .++...|+. .....-... .+.. -.+.+.+..+++.+.+++ ++|.=+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~n~l~~-~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~a 317 (345)
T PRK13499 240 NKDLSLKADFSLAKPLLITNVLLS-ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKGA 317 (345)
T ss_pred CCCcccchhccccchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccCC
Confidence 11111 011110 01121111 111111111 111111222 1111 113445667999999995 998855
Q ss_pred -----HHHHHHHHHHHHHhheeecC
Q 017343 281 -----WLYFIAFAAVAVGLIIYSGG 300 (373)
Q Consensus 281 -----~~~~~G~~li~~g~~l~~~~ 300 (373)
...++|.+++++|.++....
T Consensus 318 ~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 318 SRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred CccchhHHHHHHHHHHHHHHHHhhc
Confidence 56688999999998876543
No 55
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.51 E-value=9.7e-07 Score=71.96 Aligned_cols=130 Identities=19% Similarity=0.188 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHhc-----cCCCcHHHHHHHHHHHHHHHHHHHHHhc--c-------c-------Cccc
Q 017343 15 GLGLGQFLSLLITSTGFSSSELARK-----GINAPTSQSFFNYVLLAIVYGSLMLYRR--Q-------P-------LKAK 73 (373)
Q Consensus 15 ~~~l~~~~~l~~~~~~~~~~~l~~~-----~~~~p~~~~~~r~~~~~~~l~~~~~~~~--~-------~-------~~~~ 73 (373)
|.++++...++.+.-....+.+.++ ...+|..+..+....+.+++.+...... . . ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 4567777888888888888887766 4667888888888888888877654432 0 0 1233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343 74 WYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV 144 (373)
Q Consensus 74 ~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 144 (373)
+...+..|++.+..++..+..++++++...+++.....+++.++++++++|+++..+++|+.++++|+++-
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y 151 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY 151 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence 44455567777777999999999999999999999999999999999999999999999999999998763
No 56
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.47 E-value=1.3e-06 Score=79.68 Aligned_cols=136 Identities=13% Similarity=0.038 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhccC-CCcHHHHHHHHHHHHHHHHHHHH-Hhc---------ccCccchHHHHHHH
Q 017343 13 LLGLGLGQFLSLLITSTGFSSSELARKGI-NAPTSQSFFNYVLLAIVYGSLML-YRR---------QPLKAKWYYYLILG 81 (373)
Q Consensus 13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~-~~p~~~~~~r~~~~~~~l~~~~~-~~~---------~~~~~~~~~~~~~g 81 (373)
..|.++++..+++|+......|...++.. .......++-.....+.+..... ... ......|...+..+
T Consensus 142 ~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 142 MLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 46888888899999999998888754321 12223334444443333322211 111 11223455566667
Q ss_pred HHHHHH-HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343 82 LIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD 148 (373)
Q Consensus 82 ~~~~~~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 148 (373)
++.... ..+++.++++.+++.++++..+.|++..++++++++|+++..+++|..+.++|+++...+.
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~ 289 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL 289 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence 666655 7788899999999999999999999999999999999999999999999999998876644
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.46 E-value=1.3e-05 Score=74.62 Aligned_cols=134 Identities=9% Similarity=0.078 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHH
Q 017343 165 ALVIAGATLYAVSNVSEEFLVKKAD-RIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSF 243 (373)
Q Consensus 165 ~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (373)
.+.+.--.+...+++.+|...+..+ |+.++.++++++.++..+.. .......++.......+..++..++.....+..
T Consensus 52 ~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~llp~gl~~~~~~~~ 130 (350)
T PTZ00343 52 LLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYW-ATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFG 130 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444556677888888889999 99999999999987754433 222221122210011111222222222222333
Q ss_pred HHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 244 VPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 244 ~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
....++..++...+++..++|++++++++++++|+++..+++|.+++++|+.+...
T Consensus 131 ~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 131 AVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 44566899999999999999999999999999999999999999999999999764
No 58
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.28 E-value=6.5e-07 Score=68.35 Aligned_cols=64 Identities=11% Similarity=0.021 Sum_probs=57.6
Q ss_pred HHHHH-HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 83 IDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 83 ~~~~~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
++... .+++..+++..|.+.+..+.++.++++++++++++|||+++++++|+.++++|++++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 44444 77777999999999999999999999999999999999999999999999999987754
No 59
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.22 E-value=2.3e-05 Score=60.29 Aligned_cols=59 Identities=15% Similarity=0.215 Sum_probs=50.0
Q ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 243 FVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 243 ~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
......++.++ .+.....+.|+++.++++++++|+++..+++|.+++++|+++..+.+.
T Consensus 51 ~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 51 LFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 33444577775 677888899999999999999999999999999999999999887553
No 60
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.21 E-value=6.1e-05 Score=68.76 Aligned_cols=123 Identities=8% Similarity=-0.034 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHhcc-CChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHHhhc
Q 017343 173 LYAVSNVSEEFLVKK-ADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILLKTN 251 (373)
Q Consensus 173 ~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (373)
+...+++++|...++ ..|..++.+.+.++.+...+.. .......++.+...+......+.. ....+......+++.
T Consensus 13 ~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~l~~~ 89 (302)
T TIGR00817 13 LNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSW-SSGLPKRLKISSALLKLLLPVAIV--HTIGHVTSNVSLSKV 89 (302)
T ss_pred HHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHhc
Confidence 344556778888877 5588888888888876654331 111111122222222222233322 333445556667999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 252 GATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 252 ~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
++...++...+.|+++.++++++++|+++..+++|.+++++|+++..
T Consensus 90 s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 90 AVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred cHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999998754
No 61
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.21 E-value=7.7e-06 Score=74.04 Aligned_cols=131 Identities=11% Similarity=0.065 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHH---HHHHHHHHHHHHhcccCccchHHHHHHHHHHHHHH
Q 017343 12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYV---LLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGN 88 (373)
Q Consensus 12 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 88 (373)
.++|++.+++.++.++......|... .+|...++.... +..+++.......++...+..+...+.|++...++
T Consensus 150 ~~~Gi~~~l~sg~~y~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~ia~ 225 (290)
T TIGR00776 150 FKKGILLLLMSTIGYLVYVVVAKAFG----VDGLSVLLPQAIGMVIGGIIFNLGHILAKPLKKYAILLNILPGLMWGIGN 225 (290)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcC----CCcceehhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence 46799999999999988888888652 356655433333 33333322221111222334445556788865558
Q ss_pred HHHHHHHh-ccchhHHHHhhcchhhHHHHHHHHHhccccceeee----ehhhhheecceeeee
Q 017343 89 FLVVKAYQ-YTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKI----TGVVVCVAGLVTVIF 146 (373)
Q Consensus 89 ~~~~~al~-~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~----~~~~l~~~Gv~l~~~ 146 (373)
.+++.+.+ +.+++.+.++.+..|+...+++++++||+.+++++ +|.++.+.|+.++..
T Consensus 226 ~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 226 FFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 88889999 99999999999999999999999999999999999 999999888877643
No 62
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.20 E-value=5.1e-05 Score=66.28 Aligned_cols=138 Identities=18% Similarity=0.161 Sum_probs=100.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhcc-ccccccccccchhHHHHHHHHHHH
Q 017343 161 RKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERK-ELQSIHWSAGAALPFFGYALAMFL 239 (373)
Q Consensus 161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 239 (373)
..|+++++.+-+.|+..-.+.| ..+..++.++.++..+++..++.......... ...+....+..+..+.....-...
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~k-ll~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~ 84 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFK-LLEPLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGL 84 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHH-HHccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 4799999999999999999987 56789999999999999998886665554332 111111122222222221111112
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 240 ~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
-+....+...+..+.-+++-.+++|.+.+++|.++++|+++..|++..++..+|+....+
T Consensus 85 nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 85 NWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 222233445777888899999999999999999999999999999999999999987664
No 63
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.17 E-value=8.6e-05 Score=56.69 Aligned_cols=60 Identities=18% Similarity=0.238 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 239 LFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 239 ~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
..+.....++++.+...+.....+.++++.++++++|||+++..+++|.+++++|+++..
T Consensus 49 l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 49 LAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 344455566688999999888889999999999999999999999999999999998754
No 64
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.11 E-value=8.2e-05 Score=57.16 Aligned_cols=56 Identities=9% Similarity=0.191 Sum_probs=44.5
Q ss_pred HHHhhcchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343 246 ILLKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 246 ~~~~~~~a~~~~~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
..+++.+..++-.. .-+..+.+.+.++++|+|++|+.+++|+.+|++|+++.+...
T Consensus 49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 33466666555444 345688889999999999999999999999999999986544
No 65
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.99 E-value=0.00055 Score=54.42 Aligned_cols=131 Identities=19% Similarity=0.133 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHH
Q 017343 163 GDALVIAGATLYAVSNVSEEFLVKKAD-RIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFY 241 (373)
Q Consensus 163 G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (373)
..++++.+..+-++...++.++.++.+ |+......+..+.+.+.+...+.+...... .....++.+++..++....
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~--~~~~p~w~~lGG~lG~~~V- 78 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLAS--LSSVPWWAYLGGLLGVFFV- 78 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccch--hccCChHHhccHHHHHHHH-
Confidence 357889999999999999999998876 999999999999999877776666542222 2222233333433332222
Q ss_pred HHHHHHHhhcchhHHHH-HHHHHHHHHHHHHHH----HhcccccHHHHHHHHHHHHHhhe
Q 017343 242 SFVPILLKTNGATMLNL-SLLTSDMWAVLIRIG----AYHEKVDWLYFIAFAAVAVGLII 296 (373)
Q Consensus 242 ~~~~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~----~~~e~~~~~~~~G~~li~~g~~l 296 (373)
.......++.++..... ...-+.+.+.+++.+ .-.+++++.+++|.+++++|+++
T Consensus 79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 22333346666655554 344556677777775 23477999999999999999864
No 66
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.97 E-value=4.8e-05 Score=59.56 Aligned_cols=118 Identities=17% Similarity=0.172 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHhc-cCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHH-HHHHH
Q 017343 15 GLGLGQFLSLLITSTGFSSSELARK-GINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEG-NFLVV 92 (373)
Q Consensus 15 ~~~l~~~~~l~~~~~~~~~~~l~~~-~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 92 (373)
++++..+..++-+....+-|+-.++ +..+... . . ...+.. . .. ...++..|+..... ..++.
T Consensus 3 ~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~-~--~--~~~~~~----~------~~-p~~~i~lgl~~~~la~~~w~ 66 (129)
T PRK02971 3 GYLWGLASVLLASVAQLSLKWGMSRLPLLSHAW-D--F--IAALLA----F------GL-ALRAVLLGLAGYALSMLCWL 66 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhCCCccchh-H--H--HHHHHH----H------hc-cHHHHHHHHHHHHHHHHHHH
Confidence 4556666666667777777766554 2221111 1 1 111100 0 11 11245556655555 88888
Q ss_pred HHHhccchhHHHHhhcchhhHHHHHHHH--Hhccccceeeeehhhhheecceeeeecc
Q 017343 93 KAYQYTSLTSVMLLDCWTIPCVMFLTWI--FLKTKYRYKKITGVVVCVAGLVTVIFSD 148 (373)
Q Consensus 93 ~al~~~~~~~~~~i~~~~p~~~~ll~~~--~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 148 (373)
.+++..+++.+..+.+..+.++.+.++. +++|+++..+++|++++++|++++..++
T Consensus 67 ~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 67 KALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 9999999999999999998888888875 8999999999999999999999987643
No 67
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.97 E-value=0.00069 Score=61.10 Aligned_cols=140 Identities=15% Similarity=0.173 Sum_probs=93.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhcc-CChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHH
Q 017343 161 RKGDALVIAGATLYAVSNVSEEFLVKK-ADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFL 239 (373)
Q Consensus 161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (373)
..+..+.+..++.|+......+...++ .+...........+.+.. ......+.....+.... .....+...+....
T Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 82 (292)
T COG0697 6 LLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLL-LPLLLLEPRGLRPALRP--WLLLLLLALLGLAL 82 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHH-HHHHHhhcccccccccc--hHHHHHHHHHHHHH
Confidence 467788888889999999999988776 444445554666565552 22212211101111111 11222222333333
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH-HHhcccccHHHHHHHHHHHHHhheeecCCCC
Q 017343 240 FYSFVPILLKTNGATMLNLSLLTSDMWAVLIRI-GAYHEKVDWLYFIAFAAVAVGLIIYSGGDKD 303 (373)
Q Consensus 240 ~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~-~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~ 303 (373)
.+.......++.++.......++.|++..++++ ++++|+++..++.|..+.+.|+++.......
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~ 147 (292)
T COG0697 83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG 147 (292)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence 334444456899999999999999999999997 6679999999999999999999999875544
No 68
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.78 E-value=0.0011 Score=60.56 Aligned_cols=139 Identities=11% Similarity=0.028 Sum_probs=87.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcc-CC-hhHHHHHHHHHHHHHHHHHHHHhhcc-ccccccccccchhHHHHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVKK-AD-RIELMAFLGLFGGIISAVQISILERK-ELQSIHWSAGAALPFFGYALAMF 238 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (373)
.+.+++-.-+++-+...+....+.++ .+ |...+.+.+..-.++..+....-.+. ..... ....++.++..++.-.
T Consensus 13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~--~~~~~w~y~lla~~Dv 90 (334)
T PF06027_consen 13 IVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKV--LKRPWWKYFLLALLDV 90 (334)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhh--cchhHHHHHHHHHHHH
Confidence 34444444445555555555544432 22 55555555554444443333222111 11111 1112233333345555
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 239 LFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 239 ~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
..|.......++++.+.+++......++++++++++++++.++.+++|+++.++|+.+....+.
T Consensus 91 ~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~ 154 (334)
T PF06027_consen 91 EANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV 154 (334)
T ss_pred HHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence 6666777777999999999999999999999999999999999999999999999998887653
No 69
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.77 E-value=0.00075 Score=51.17 Aligned_cols=54 Identities=11% Similarity=0.104 Sum_probs=42.6
Q ss_pred HhhcchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343 248 LKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 248 ~~~~~a~~~~~~-~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
+++.+...+-.. .-+..+.+.+.++++|+|++++.+++|+.++++|+++.+...
T Consensus 51 l~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 51 LAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 455555554433 335578889999999999999999999999999999986544
No 70
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.70 E-value=0.0019 Score=51.32 Aligned_cols=137 Identities=13% Similarity=0.083 Sum_probs=87.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCC-hhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHH
Q 017343 161 RKGDALVIAGATLYAVSNVSEEFLVKKAD-RIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFL 239 (373)
Q Consensus 161 ~~G~~l~l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (373)
.+..++++.+..+-.+..-++.++.+..+ |.......+..|.+.+.....+.+..+......... ++.+.+..++.+.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~p-wW~~~GG~lGa~~ 82 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAP-WWAWIGGLLGAIF 82 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCc-hHHHHccchhhhh
Confidence 46778899999999999999999988766 888888888888888877666644432222112222 3333333333222
Q ss_pred HHHHHHHHHhhcchhHH-HHHHHHHHHHHHHHHHHHhc----ccccHHHHHHHHHHHHHhheeec
Q 017343 240 FYSFVPILLKTNGATML-NLSLLTSDMWAVLIRIGAYH----EKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 240 ~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~----e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
. ........+.+++.. .....-+.+.+.+++.+=+. .+++...++|++++++|+++...
T Consensus 83 v-t~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~ 146 (150)
T COG3238 83 V-TSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARR 146 (150)
T ss_pred h-hhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcc
Confidence 2 222222344444444 34444556666777665443 56899999999999999666544
No 71
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.66 E-value=0.00035 Score=63.78 Aligned_cols=132 Identities=17% Similarity=0.206 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHH--hc---------ccCccchHHHHHHHHH
Q 017343 15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY--RR---------QPLKAKWYYYLILGLI 83 (373)
Q Consensus 15 ~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~--~~---------~~~~~~~~~~~~~g~~ 83 (373)
|+++..+..++-+..+...+.+.++...++....++...++.+..++.... .. ...+..+...+...+.
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 888888888899999999988887766677888888888887777666554 22 1223345566677788
Q ss_pred HHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 84 DVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
+..+..+.+.-.+..++...+++..+.-+++.+++.+++++++++.+|+|+++.+.|..+-..
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~ 297 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY 297 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence 888877777778899999999999999999999999999999999999999999999877554
No 72
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.65 E-value=0.00033 Score=59.86 Aligned_cols=130 Identities=10% Similarity=-0.018 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-cc--CccchHHHHHHHHHHHHH-HHH
Q 017343 15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QP--LKAKWYYYLILGLIDVEG-NFL 90 (373)
Q Consensus 15 ~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~--~~~~~~~~~~~g~~~~~~-~~~ 90 (373)
|.++......||+..-...+.... ..+...-+..-+.+++++.+|+-.... .. .+.-...-+..+++.... +.+
T Consensus 149 Gv~~Al~AG~~Wa~YIv~G~r~g~--~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~p~ll~laLgvavlSSalPYsL 226 (292)
T COG5006 149 GVALALGAGACWALYIVLGQRAGR--AEHGTAGVAVGMLVAALIVLPIGAAQAGPALFSPSLLPLALGVAVLSSALPYSL 226 (292)
T ss_pred HHHHHHHHhHHHHHHHHHcchhcc--cCCCchHHHHHHHHHHHHHhhhhhhhcchhhcChHHHHHHHHHHHHhcccchHH
Confidence 444444444455544444333321 344455566778888888888755443 11 122222333445555555 667
Q ss_pred HHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 91 VVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 91 ~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
-..+++..|.....++.++.|.+.++.++++++|++|..||+++...+++..-.+.
T Consensus 227 EmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 227 EMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred HHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 78999999999999999999999999999999999999999999988877765554
No 73
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.58 E-value=0.0027 Score=47.94 Aligned_cols=54 Identities=6% Similarity=-0.028 Sum_probs=42.1
Q ss_pred HHHHhhcchhHHHH-HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 245 PILLKTNGATMLNL-SLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 245 ~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
...+++.+..++-. -.-+-.+.+.+.++++|+|++++.+++|+.+++.|++..+
T Consensus 53 s~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 53 SQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 34446666555533 3345578889999999999999999999999999998864
No 74
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.55 E-value=7.4e-05 Score=64.16 Aligned_cols=134 Identities=13% Similarity=0.147 Sum_probs=83.6
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhH---HHHHHH
Q 017343 159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALP---FFGYAL 235 (373)
Q Consensus 159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 235 (373)
..+.|..+..++ .++....+..++.. +.+|.......+++-.++..+.....-..-+.+. ....+++ +.|+..
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~-e~~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~--g~R~~LiLRg~mG~tg 110 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVL-ENDPMELASFRLLVRMLITYPCLIYYMQPVIGPE--GKRKWLILRGFMGFTG 110 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhh-ccChhHhhhhhhhhehhhhheEEEEEeeeeecCC--CcEEEEEeehhhhhhH
Confidence 446899998888 77777777777665 4556665555544444443332221111100111 1111222 233222
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343 236 AMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 236 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
.+.. ++.+++.+-.-+.++...+|+++++++|++++|+.|....+|..+.+.|+++..+.+
T Consensus 111 vmlm-----yya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 111 VMLM-----YYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred HHHH-----HHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 2222 233356666666677777899999999999999999999999999999999988643
No 75
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.49 E-value=0.0027 Score=47.64 Aligned_cols=53 Identities=13% Similarity=0.018 Sum_probs=41.8
Q ss_pred HHhhcchhHHH-HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 247 LLKTNGATMLN-LSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 247 ~~~~~~a~~~~-~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
.+++.+..++- +-.-+-.+.+.+.++++|+|++|+.+++|+.++++|++..+.
T Consensus 49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 34555555443 334456888899999999999999999999999999998764
No 76
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.47 E-value=0.0004 Score=52.50 Aligned_cols=107 Identities=12% Similarity=0.129 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhhHHHHhc--cCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHHHHHHHHHHhcc
Q 017343 21 FLSLLITSTGFSSSELARK--GINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAYQYT 98 (373)
Q Consensus 21 ~~~l~~~~~~~~~~~l~~~--~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~ 98 (373)
+++++|+..+.+.|.-.+. ....+ . +..-....+ -. .+++.+.=+++..+...|++.+...
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~---~--~~~~~~~~L-----------l~-n~~y~ipf~lNq~GSv~f~~~L~~~ 65 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKAS---L--QLLQEIKFL-----------LL-NPKYIIPFLLNQSGSVLFFLLLGSA 65 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccch---H--HHHHHHHHH-----------HH-hHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4678999999999988765 22222 1 322222111 11 2345555667888899999999999
Q ss_pred chhHHHHhh-cchhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343 99 SLTSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV 144 (373)
Q Consensus 99 ~~~~~~~i~-~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 144 (373)
+.+.+.++. ++.-+++++.++++.+|..+++.++|+.+.++|+.+.
T Consensus 66 dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 66 DLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred CceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 999999995 7888888899988888888889999999999999875
No 77
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.45 E-value=0.0037 Score=46.46 Aligned_cols=55 Identities=16% Similarity=0.164 Sum_probs=42.2
Q ss_pred HHHhhcchhHH-HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343 246 ILLKTNGATML-NLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300 (373)
Q Consensus 246 ~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 300 (373)
..+++.+..++ ++-.-+-.+.+.+.++++|+|++++.+++|..++++|++..+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 33455554444 23344557888899999999999999999999999999987653
No 78
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.37 E-value=0.00017 Score=55.50 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHhh-cchhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343 82 LIDVEGNFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD 148 (373)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 148 (373)
++...+.+++..+++++|.+.+..+. ....+.+++++.++++|+++..+++++.++++|++++-..+
T Consensus 38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 33344477788999999999998885 58888899999999999999999999999999998886543
No 79
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.37 E-value=0.0014 Score=57.60 Aligned_cols=128 Identities=14% Similarity=0.099 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHH-HHHHH-hcccCccchHHHHHHHHHHHHH
Q 017343 10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYG-SLMLY-RRQPLKAKWYYYLILGLIDVEG 87 (373)
Q Consensus 10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~-~~~~~-~~~~~~~~~~~~~~~g~~~~~~ 87 (373)
++..+++...+..++.+.....+.+. ...+|+...+-. .+..++-. .+... ++....+..++-.+.|++...+
T Consensus 134 ~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~lPq-aiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ig 208 (269)
T PF06800_consen 134 SNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFLPQ-AIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIG 208 (269)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHHHH-HHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHH
Confidence 45566766655555555444444443 334455444322 22222211 11111 3333444556667889998999
Q ss_pred HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeee----hhhhheecce
Q 017343 88 NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKIT----GVVVCVAGLV 142 (373)
Q Consensus 88 ~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~----~~~l~~~Gv~ 142 (373)
|++++.|.+....+.+..+.++.++...+.+.+++||+-+++++. |+++.++|.+
T Consensus 209 nl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 209 NLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999988764 4444444443
No 80
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.31 E-value=0.0016 Score=59.01 Aligned_cols=119 Identities=13% Similarity=-0.023 Sum_probs=79.0
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHH
Q 017343 159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMF 238 (373)
Q Consensus 159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (373)
+...|.++++.++++.+....++|+...+.+....-.-... .. .-..+.++..++..+++..
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~--------~~----------~l~~~~W~~G~~~~~~g~~ 65 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGG--------RS----------YLRRPLWWIGLLLMVLGEI 65 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchh--------hH----------HHhhHHHHHHHHHHhcchH
Confidence 45689999999999999999999997654432100000000 00 0000111112222222222
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 239 LFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 239 ~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
+....+...++..++....+..++..+++..+++|+++...++|+++++.|..+...
T Consensus 66 ----~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 66 ----LNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred ----HHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 223334778888888888889999999999999999999999999999999976553
No 81
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.28 E-value=0.0027 Score=55.78 Aligned_cols=74 Identities=8% Similarity=0.092 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCC
Q 017343 231 FGYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDD 304 (373)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~ 304 (373)
....+.+...|.+....+++.++....+...++.+++.++++++++.+++..||++..++++|+.+........
T Consensus 21 ~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 21 AVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 33445566777777788899999999999999999999999999999999999999999999999998765443
No 82
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.20 E-value=0.0017 Score=49.00 Aligned_cols=67 Identities=18% Similarity=0.248 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHhhc-chhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343 78 LILGLIDVEGNFLVVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV 144 (373)
Q Consensus 78 ~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 144 (373)
...-+....+.++...++++.|.+.+..+.. ...+.+.+.+.+++||++++.+++++.+.++|++.+
T Consensus 39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 3333333444777779999999999877665 556777899999999999999999999999999875
No 83
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.13 E-value=0.0051 Score=53.85 Aligned_cols=131 Identities=17% Similarity=0.005 Sum_probs=67.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 017343 163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYS 242 (373)
Q Consensus 163 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (373)
|.+.++.|+++++...+=.||.- ..|++.+..+.+....+...+...+.+.+.+. ++ ..+.|.. ....|.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~-----p~--amlgG~l--W~~gN~ 70 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-TGDGFFFQWVMCSGIFLVGLVVNLILGFPPFY-----PW--AMLGGAL--WATGNI 70 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcce-----eH--HHhhhhh--hhcCce
Confidence 56788999999999998888653 45666666555555555444444443322211 11 1111100 001111
Q ss_pred HHHHHHhhcchhHHHHH-HHHHHHHHHHHHHH-Hhcccc-----cHHHHHHHHHHHHHhheeecCCCC
Q 017343 243 FVPILLKTNGATMLNLS-LLTSDMWAVLIRIG-AYHEKV-----DWLYFIAFAAVAVGLIIYSGGDKD 303 (373)
Q Consensus 243 ~~~~~~~~~~a~~~~~~-~~~~pv~~~l~~~~-~~~e~~-----~~~~~~G~~li~~g~~l~~~~~~~ 303 (373)
...-+++..+-.+.-.+ ...+.+.+...+-+ +||+++ .+..++|++++++|..++..-|.+
T Consensus 71 ~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~ 138 (254)
T PF07857_consen 71 LVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE 138 (254)
T ss_pred eehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence 11112222222222221 22234555555543 455442 567899999999999988765433
No 84
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.12 E-value=0.00055 Score=51.37 Aligned_cols=63 Identities=10% Similarity=0.062 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHhccchhHHHHhhc-chhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 84 DVEGNFLVVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 84 ~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
...+.++...+++.+|.+.+..+.. ...+.+.+.+.+++||++++.+++++.+.++|++.+-.
T Consensus 39 ~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 39 MIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3344777779999999999877665 66777889999999999999999999999999988743
No 85
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.09 E-value=0.00049 Score=52.19 Aligned_cols=60 Identities=17% Similarity=0.337 Sum_probs=53.0
Q ss_pred HHHHHHHHHhccchhHHHHhh-cchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 87 GNFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 87 ~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
+..+...+++..|.+.+..+. ....+.++++++++++|++++.+++|+.+.++|++++-.
T Consensus 43 sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l 103 (110)
T PRK09541 43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL 103 (110)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 366677999999999998875 467788889999999999999999999999999999865
No 86
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.09 E-value=0.005 Score=48.91 Aligned_cols=125 Identities=15% Similarity=0.200 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcc-----cCccchHHHHHHHHHHHHHHHHH
Q 017343 17 GLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQ-----PLKAKWYYYLILGLIDVEGNFLV 91 (373)
Q Consensus 17 ~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~ 91 (373)
+++++.-.+.+....++..+.+. ..+|+.-+++.+..+.+++..+....++ ..+.+||. ..-|+++.....+.
T Consensus 4 lla~~aG~~i~~q~~~N~~L~~~-~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~-~lGG~lG~~~V~~~ 81 (138)
T PF04657_consen 4 LLALLAGALIALQAAFNGQLGKA-LGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWA-YLGGLLGVFFVLSN 81 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHH-hccHHHHHHHHHHH
Confidence 34444455666666666666653 2358999999999999888777655442 22334444 44788888888888
Q ss_pred HHHHhccchhHHHHhhcchhhHHH-HHHHH----Hhccccceeeeehhhhheeccee
Q 017343 92 VKAYQYTSLTSVMLLDCWTIPCVM-FLTWI----FLKTKYRYKKITGVVVCVAGLVT 143 (373)
Q Consensus 92 ~~al~~~~~~~~~~i~~~~p~~~~-ll~~~----~l~e~~~~~~~~~~~l~~~Gv~l 143 (373)
.......+++....+.-+.=+... ++..+ .-++++++.+.+|+.+.++|+++
T Consensus 82 ~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 82 IILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 888899888888776555544444 66654 35688899999999999999864
No 87
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.99 E-value=0.00064 Score=50.47 Aligned_cols=65 Identities=12% Similarity=0.122 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHhhc-chhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 82 LIDVEGNFLVVKAYQYTSLTSVMLLDC-WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
+.......+.-.|++++|.+.+..+.. ...+.+.+.++++++|+++..+++++.+.++|++.+-.
T Consensus 38 v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 38 VGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 333444777779999999998866654 45566779999999999999999999999999987644
No 88
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.88 E-value=0.0046 Score=54.48 Aligned_cols=135 Identities=13% Similarity=0.111 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc---------ccCccchHHHHHH
Q 017343 10 KKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR---------QPLKAKWYYYLIL 80 (373)
Q Consensus 10 ~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~---------~~~~~~~~~~~~~ 80 (373)
.+...|+.+....-++-+..+...+.+.+..-.+++.+.+.-.++..+.-...+.... ...+..++..++.
T Consensus 168 ~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~ 247 (327)
T KOG1581|consen 168 ENSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLY 247 (327)
T ss_pred CCchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHH
Confidence 4567888888888888888999988888765556677766666665555444443333 4456677889999
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343 81 GLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV 144 (373)
Q Consensus 81 g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 144 (373)
+.++..++.+.|+-++.-.+-.-+.+..+--++..+++.+.++.+++..+|+|+.+.+.|+.+=
T Consensus 248 s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~ 311 (327)
T KOG1581|consen 248 STCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE 311 (327)
T ss_pred HHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence 9999999888887777766666666777788999999999999999999999999888877653
No 89
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.70 E-value=0.028 Score=41.36 Aligned_cols=46 Identities=9% Similarity=0.028 Sum_probs=23.1
Q ss_pred HHHHhhcchhHHHH-HHHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 017343 245 PILLKTNGATMLNL-SLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAV 290 (373)
Q Consensus 245 ~~~~~~~~a~~~~~-~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li 290 (373)
..++++.+..++-. ..-+..+...+.++++|||++|+.+++|+.+|
T Consensus 47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 34446666666543 33466889999999999999999999999875
No 90
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.66 E-value=0.012 Score=50.96 Aligned_cols=67 Identities=15% Similarity=0.227 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheeccee
Q 017343 77 YLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVT 143 (373)
Q Consensus 77 ~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l 143 (373)
.....+.+..+..+....++|.+....++...+.++++.+++.++++|+++..+|+|+.+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4444555666677888999999999999999999999999999999999999999999999998764
No 91
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.44 E-value=0.016 Score=42.63 Aligned_cols=51 Identities=14% Similarity=0.116 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhccchhHHHHhh-cchhhHHHHHHHHHhccccceeeeehhhh
Q 017343 86 EGNFLVVKAYQYTSLTSVMLLD-CWTIPCVMFLTWIFLKTKYRYKKITGVVV 136 (373)
Q Consensus 86 ~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~ll~~~~l~e~~~~~~~~~~~l 136 (373)
...+++..++++.|.+.+..+. .+..+.+.+.+.++++|+++..+++|+.+
T Consensus 41 ~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l 92 (93)
T PF00893_consen 41 LSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL 92 (93)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence 3367777999999999997765 48888899999999999999999999875
No 92
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=96.35 E-value=0.78 Score=41.75 Aligned_cols=166 Identities=11% Similarity=0.082 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc----------ccCccchHHHHHHHH
Q 017343 13 LLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR----------QPLKAKWYYYLILGL 82 (373)
Q Consensus 13 ~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~g~ 82 (373)
..|+++-.+-+++.++.+.-.|.... -.++..+.-..+..-++.|++.-.- ..+........+.|+
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkvk~----WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKVKG----WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhcCC----ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 44555555555555555555554332 2355554444444545555533211 333445566677788
Q ss_pred HHHHHHHHHHHHHhccchhHHH-HhhcchhhHHHHHHHHHhc-------cccceeeeehhhhheecceeeeeccCccCC-
Q 017343 83 IDVEGNFLVVKAYQYTSLTSVM-LLDCWTIPCVMFLTWIFLK-------TKYRYKKITGVVVCVAGLVTVIFSDVHAGD- 153 (373)
Q Consensus 83 ~~~~~~~~~~~al~~~~~~~~~-~i~~~~p~~~~ll~~~~l~-------e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~- 153 (373)
+-..+...+=.+++|+..+..+ +...+...+-.++-.++.+ .+-....++|++++++|+.+....+...+.
T Consensus 82 lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~~ 161 (344)
T PF06379_consen 82 LWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEKE 161 (344)
T ss_pred HHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhhh
Confidence 8777788888999998777653 3334444454555455433 222345789999999999998865432221
Q ss_pred ---CCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 017343 154 ---RGSGSSPRKGDALVIAGATLYAVSNVSEE 182 (373)
Q Consensus 154 ---~~~~~~~~~G~~l~l~a~~~~a~~~v~~~ 182 (373)
+....+.-.|.++++++.+..++.+.-..
T Consensus 162 ~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 162 LGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred hccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 11234456899999999999999887655
No 93
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.20 E-value=0.038 Score=41.87 Aligned_cols=109 Identities=11% Similarity=0.095 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHHHHH
Q 017343 169 AGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYSFVPILL 248 (373)
Q Consensus 169 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (373)
+-+++|++.+-+.||..+..++..-.. +..-.... ++. + +.....++..-.+...|+...
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~~-~~~~~~~~-----Ll~--------n--~~y~ipf~lNq~GSv~f~~~L---- 62 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKASL-QLLQEIKF-----LLL--------N--PKYIIPFLLNQSGSVLFFLLL---- 62 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccchH-HHHHHHHH-----HHH--------h--HHHHHHHHHHHHHHHHHHHHH----
Confidence 346889999999999876554332221 21111111 111 1 111222333333444554444
Q ss_pred hhcchhHHH-HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhee
Q 017343 249 KTNGATMLN-LSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIY 297 (373)
Q Consensus 249 ~~~~a~~~~-~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~ 297 (373)
.+.+-+.+. +...+.-+++++.++++.+|..+...++|++++++|+.+.
T Consensus 63 ~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 63 GSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred hcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 444433333 3345668999999998888888999999999999998763
No 94
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.05 E-value=0.016 Score=49.09 Aligned_cols=78 Identities=8% Similarity=0.166 Sum_probs=68.8
Q ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 69 PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 69 ~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
+-+..|+.+.++++.++.++++.+.-..+-++-..+++..+--.|+.+.+.++++..++.+||+|..+.+.|...=..
T Consensus 236 RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 236 RHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred hccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 345567888899999999999999999998888899999999999999999999999999999999999888766443
No 95
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.00 E-value=0.0093 Score=54.01 Aligned_cols=134 Identities=11% Similarity=0.127 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHh--ccCCCcHHHHHHHHHHHHHHHH-HHHHHhc--cc-------CccchHHHHHH
Q 017343 13 LLGLGLGQFLSLLITSTGFSSSELAR--KGINAPTSQSFFNYVLLAIVYG-SLMLYRR--QP-------LKAKWYYYLIL 80 (373)
Q Consensus 13 ~~~~~l~~~~~l~~~~~~~~~~~l~~--~~~~~p~~~~~~r~~~~~~~l~-~~~~~~~--~~-------~~~~~~~~~~~ 80 (373)
+.|.+......+..+.-..+.+.+.+ ....+++.+..+-.-++.++++ |+..... .. ..-........
T Consensus 162 ~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (316)
T KOG1441|consen 162 LFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILLLN 241 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHHHH
Confidence 45555555555666666666666653 2334667777666667777777 7655433 11 11112223334
Q ss_pred HHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 81 GLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 81 g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
.++.+..|...|..+..+++-+.++.....=.++.+.++++++++.++.+.+|..++++|+++-..
T Consensus 242 sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 242 SVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 466666688889999999999999998888888888888888888888888888888888876543
No 96
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.99 E-value=0.092 Score=48.30 Aligned_cols=139 Identities=14% Similarity=0.070 Sum_probs=73.5
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHH--HHHHHHHHHH-HHHHhhcccccccc-ccccchhHHHHHH
Q 017343 159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFL--GLFGGIISAV-QISILERKELQSIH-WSAGAALPFFGYA 234 (373)
Q Consensus 159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 234 (373)
+...|+++.+++++|++...+-.|+ .++- +++.. |. .+++.++... ...+..+.-.+-.. .+...+..-+..+
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w-~wE~~-W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~G 80 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW-SWETM-WSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLFG 80 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCC-chhHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHHH
Confidence 3568999999999999999999987 4433 33333 22 1111111110 01111111000011 1111111111111
Q ss_pred HHHHHHHHHHHHHHhhcchhHH-HHHHHHHHHHHHHHHHHHhcccc---c----HHHHHHHHHHHHHhheeecC
Q 017343 235 LAMFLFYSFVPILLKTNGATML-NLSLLTSDMWAVLIRIGAYHEKV---D----WLYFIAFAAVAVGLIIYSGG 300 (373)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~e~~---~----~~~~~G~~li~~g~~l~~~~ 300 (373)
+.....+.......++.+.... .+..-++-+.+.+++.+++||-. + ..-.+|.+++++|+++..+.
T Consensus 81 ~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A 154 (345)
T PRK13499 81 ALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA 154 (345)
T ss_pred HHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 1111222233333455555444 33445668899999999999764 2 33578999999999998873
No 97
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=95.86 E-value=0.035 Score=50.53 Aligned_cols=142 Identities=20% Similarity=0.186 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhc-c--CCCcHHHHHHHHHHHHHHHHHHHHH----hc----ccCccchH
Q 017343 7 FWTKKTLLGLGLGQFLSLLITSTGFSSSELARK-G--INAPTSQSFFNYVLLAIVYGSLMLY----RR----QPLKAKWY 75 (373)
Q Consensus 7 ~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~-~--~~~p~~~~~~r~~~~~~~l~~~~~~----~~----~~~~~~~~ 75 (373)
..-+|...|-+++++.+++.+.--+..|.-... | .+-+.++.+.- ++..++++|.++. .. .+...+.-
T Consensus 240 ~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvG-LfnllllwP~l~iL~~~~~e~F~lP~~~q~~ 318 (416)
T KOG2765|consen 240 LPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVG-LFNLLLLWPPLIILDFFGEERFELPSSTQFS 318 (416)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHH-HHHHHHHhHHHHHHHHhccCcccCCCCceeE
Confidence 344556667777777777776666665554332 2 22233333332 3444445443221 11 23334444
Q ss_pred HHHHHHHHHHHH-HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccC
Q 017343 76 YYLILGLIDVEG-NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDV 149 (373)
Q Consensus 76 ~~~~~g~~~~~~-~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~ 149 (373)
..++.++++.+. .+++..|.-.+++-.+++-.+++.+..++.-.++.++++++..++|...+++|.+++...+.
T Consensus 319 ~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 319 LVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred eeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 566667777776 99999999999999999999999999999999999999999999999999999999987654
No 98
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.60 E-value=0.025 Score=49.23 Aligned_cols=135 Identities=12% Similarity=0.112 Sum_probs=90.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc------c--c--CccchHHHHHHH
Q 017343 12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR------Q--P--LKAKWYYYLILG 81 (373)
Q Consensus 12 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~------~--~--~~~~~~~~~~~g 81 (373)
.+.|.++|.+.++.-+......|.....-.+.-+.++++..+.+.++.+|++...+ . . ..+.|....+.|
T Consensus 183 s~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 183 SWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred chhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 46788899888888777777666433323345578899999999999999877655 1 1 122233344445
Q ss_pred HHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 82 LIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 82 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
++|+..++...+=++-+++-...+-.......-.+++..+++|..+...|.+.++.+.|-..-+.
T Consensus 263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~ 327 (347)
T KOG1442|consen 263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTL 327 (347)
T ss_pred HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHH
Confidence 66655554444455556655554444445555668999999999999999998887777665543
No 99
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.40 E-value=1 Score=41.01 Aligned_cols=136 Identities=13% Similarity=0.069 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcc----CChhHHHHHHHHHHHHHHHHHHHHhhc---c-cccccc---cccc-chhHHH
Q 017343 164 DALVIAGATLYAVSNVSEEFLVKK----ADRIELMAFLGLFGGIISAVQISILER---K-ELQSIH---WSAG-AALPFF 231 (373)
Q Consensus 164 ~~l~l~a~~~~a~~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~---~~~~-~~~~~~ 231 (373)
.+..+...+.++......|...++ ..|.+.....-+.-.++.....+.-+. . .....+ +..+ ...-+.
T Consensus 17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~ 96 (345)
T KOG2234|consen 17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS 96 (345)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence 344455555566666666654432 236667777767766666444333221 1 011111 1111 111222
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 232 GYALAMFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
...+.+..-|...+..+.+.++.+.++...++...+.++..++++++++..||...++...|+.+.+.
T Consensus 97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~ 164 (345)
T KOG2234|consen 97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL 164 (345)
T ss_pred HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 23344556666667778999999999999999999999999999999999999999999999999884
No 100
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=94.20 E-value=0.69 Score=34.06 Aligned_cols=112 Identities=13% Similarity=-0.005 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHhhHHHHhc----cCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHHHHHHHHH
Q 017343 19 GQFLSLLITSTGFSSSELARK----GINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKA 94 (373)
Q Consensus 19 ~~~~~l~~~~~~~~~~~l~~~----~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~a 94 (373)
.+.+.++|+..+.+.+.-+.. +..+...+.+.|-..... -.|.+.+.-+++..+..+||.-
T Consensus 8 lvaVgllWG~Tnplirrgs~g~~~v~~~~~k~~~~lqe~~tl~---------------l~w~Y~iPFllNqcgSaly~~t 72 (125)
T KOG4831|consen 8 LVAVGLLWGATNPLIRRGSLGWDKVKSSSRKIMIALQEMKTLF---------------LNWEYLIPFLLNQCGSALYYLT 72 (125)
T ss_pred HHHHHHHHccccHHHHHHHhhHhhccCchHHHHHHHHHHHHHH---------------HhHHHHHHHHHHHhhHHHHHHH
Confidence 356778999999998876543 222233344444322211 1234555667788889999999
Q ss_pred HhccchhHHHHhhcc-hhhHHHHHHHHHhccccceeeeehhhhheecceeee
Q 017343 95 YQYTSLTSVMLLDCW-TIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVI 145 (373)
Q Consensus 95 l~~~~~~~~~~i~~~-~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~ 145 (373)
++..+.+.+..+.+. +-.|+.+.+..+-.|...++.++|..+.++|+.+..
T Consensus 73 La~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 73 LASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 999999988876554 556677777766556667778899999999987654
No 101
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=94.07 E-value=0.033 Score=47.74 Aligned_cols=135 Identities=10% Similarity=-0.013 Sum_probs=76.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHH
Q 017343 163 GDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALAMFLFYS 242 (373)
Q Consensus 163 G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (373)
..+++++=++.|+..-....|.. .+|.+.+.-..+-+.++..+..++..+. .++.......+-| +-.-..+.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~G--G~p~qQ~lGtT~GALifaiiv~~~~~p~----~T~~~~iv~~isG--~~Ws~GQ~ 74 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFG--GKPYQQTLGTTLGALIFAIIVFLFVSPE----LTLTIFIVGFISG--AFWSFGQA 74 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecC--CChhHhhhhccHHHHHHHHHHheeecCc----cchhhHHHHHHhh--hHhhhhhh
Confidence 56788888999998877766543 3455555444444444443333332211 1221111111111 11111222
Q ss_pred HHHHHHhhcchhHHH-HHHHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhheeecCCCCCC
Q 017343 243 FVPILLKTNGATMLN-LSLLTSDMWAVLIRIGAYHEKVDWLYF----IAFAAVAVGLIIYSGGDKDDD 305 (373)
Q Consensus 243 ~~~~~~~~~~a~~~~-~~~~~~pv~~~l~~~~~~~e~~~~~~~----~G~~li~~g~~l~~~~~~~~~ 305 (373)
......+..+...+. +..-.+.+-+-+++++.|||..+..++ +..++++.|+++..++++.++
T Consensus 75 ~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk 142 (288)
T COG4975 75 NQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNK 142 (288)
T ss_pred hhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccc
Confidence 233344555554443 234456888999999999999988764 356788899999887665433
No 102
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.52 E-value=0.38 Score=38.41 Aligned_cols=130 Identities=15% Similarity=0.193 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc-cc----CccchHHHHHHHHHHHHHHH
Q 017343 15 GLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR-QP----LKAKWYYYLILGLIDVEGNF 89 (373)
Q Consensus 15 ~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~~----~~~~~~~~~~~g~~~~~~~~ 89 (373)
.+++++..-.+......++.-+.+ ...+|..-.+..+....+++..+.+.+. ++ .++..|+.+.-|+++.....
T Consensus 6 ~ll~~i~aG~~l~~Q~~iN~qL~~-~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~GG~lGa~~vt 84 (150)
T COG3238 6 YLLFAILAGALLPLQAAINGRLAR-YLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWIGGLLGAIFVT 84 (150)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHH-HcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHHccchhhhhhh
Confidence 344555555666666777777765 3447899999999998888777655543 11 12223333444566555433
Q ss_pred HHHHHHhccchhHHH-HhhcchhhHHHHHHHHHh----ccccceeeeehhhhheecceeee
Q 017343 90 LVVKAYQYTSLTSVM-LLDCWTIPCVMFLTWIFL----KTKYRYKKITGVVVCVAGLVTVI 145 (373)
Q Consensus 90 ~~~~al~~~~~~~~~-~i~~~~p~~~~ll~~~~l----~e~~~~~~~~~~~l~~~Gv~l~~ 145 (373)
..........++... ++.....+..+++-.+=. +++++..+++|+++.++|+.++.
T Consensus 85 ~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 85 SSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred hhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 334444444444443 334444444445443322 36778889999999999955443
No 103
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.55 E-value=0.43 Score=42.78 Aligned_cols=105 Identities=11% Similarity=0.102 Sum_probs=75.6
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhcc-----------cCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchh
Q 017343 43 APTSQSFFNYVLLAIVYGSLMLYRRQ-----------PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTI 111 (373)
Q Consensus 43 ~p~~~~~~r~~~~~~~l~~~~~~~~~-----------~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p 111 (373)
.-+.+.++..+++...+..+...... .....+-.+.+.++++++.+++.++..+..|+...++.....-
T Consensus 186 ~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~ 265 (314)
T KOG1444|consen 186 NKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNK 265 (314)
T ss_pred cceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHhhccccceeehhhhhh
Confidence 44566777777777666555433221 1122234556667888888999999999999999999996666
Q ss_pred hHHHHHHHHHhccccceeeeehhhhheecceeeeec
Q 017343 112 PCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFS 147 (373)
Q Consensus 112 ~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~ 147 (373)
..+.+...++.+++.++...+|+.++++|-++-...
T Consensus 266 l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~ 301 (314)
T KOG1444|consen 266 LLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYA 301 (314)
T ss_pred HHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhh
Confidence 666677777777888999999999998888776553
No 104
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=91.88 E-value=0.31 Score=42.55 Aligned_cols=124 Identities=10% Similarity=0.153 Sum_probs=84.7
Q ss_pred HHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc----------ccCccchHHHHHHHHHHHHHHHHHHHHH
Q 017343 26 ITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR----------QPLKAKWYYYLILGLIDVEGNFLVVKAY 95 (373)
Q Consensus 26 ~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~al 95 (373)
-+..+=+.....+....+...++++.+.+..++++..+.... ..+.+.....++.+..+..+......=+
T Consensus 202 DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI 281 (367)
T KOG1582|consen 202 DAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALI 281 (367)
T ss_pred HHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHH
Confidence 333344444444333334467777777777777766554433 3344445566666777777654444444
Q ss_pred hccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccC
Q 017343 96 QYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDV 149 (373)
Q Consensus 96 ~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~ 149 (373)
+.-.+..+..+...--..+.+++.+++.++++.....+.++.+.|+.+-..+..
T Consensus 282 ~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 282 KLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 555667777777778888999999999999999999999999999999888663
No 105
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.53 E-value=0.15 Score=45.59 Aligned_cols=121 Identities=12% Similarity=-0.039 Sum_probs=80.3
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhHHHHHHHH
Q 017343 157 GSSPRKGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISILERKELQSIHWSAGAALPFFGYALA 236 (373)
Q Consensus 157 ~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (373)
..+...|.++++.+.++-+...++.|+..++..... .-.+.+..+.-..+.+|...+..+++
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~------------------~ra~~gg~~yl~~~~Ww~G~ltm~vG 77 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGASG------------------LRAGEGGYGYLKEPLWWAGMLTMIVG 77 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHhhhc------------------ccccCCCcchhhhHHHHHHHHHHHHH
Confidence 445678999999999999999999988765532200 00000000111112222323332333
Q ss_pred HHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeec
Q 017343 237 MFLFYSFVPILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 237 ~~~~~~~~~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~ 299 (373)
-.. -+......++..++..+.++.+...+++..+++|++++...+|+++.++|..+...
T Consensus 78 ei~----NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 78 EIA----NFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred hHh----hHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 222 22223778888899999999999999999999999999999999999999876654
No 106
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=91.18 E-value=0.63 Score=40.92 Aligned_cols=126 Identities=13% Similarity=0.005 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhcccCccchHHHHHHHHHHHHHHHHHHHHH
Q 017343 16 LGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRRQPLKAKWYYYLILGLIDVEGNFLVVKAY 95 (373)
Q Consensus 16 ~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~al 95 (373)
++..++..++.++.++-.|.... .+++.+-++......+.-+.....+. ....+...++-|.+...+|.+..-.+
T Consensus 2 ~~a~~va~~~fGs~~vPvK~~~~---gDg~~fQw~~~~~i~~~g~~v~~~~~--~p~f~p~amlgG~lW~~gN~~~vpii 76 (254)
T PF07857_consen 2 YIACIVAVLFFGSNFVPVKKFDT---GDGFFFQWVMCSGIFLVGLVVNLILG--FPPFYPWAMLGGALWATGNILVVPII 76 (254)
T ss_pred chhHHHHHHHhcccceeeEeccC---CCcHHHHHHHHHHHHHHHHHHHHhcC--CCcceeHHHhhhhhhhcCceeehhHh
Confidence 34455566677777776665432 24555555443333332222222222 22233334555688888899999999
Q ss_pred hccchhHHHHhhcchhhHHH-HHHHH-Hhcccc-----ceeeeehhhhheecceeeee
Q 017343 96 QYTSLTSVMLLDCWTIPCVM-FLTWI-FLKTKY-----RYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 96 ~~~~~~~~~~i~~~~p~~~~-ll~~~-~l~e~~-----~~~~~~~~~l~~~Gv~l~~~ 146 (373)
+.+..+....+.++.-..+- ..+++ +++++. ....++|++++++|..+...
T Consensus 77 ~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 77 KTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 99999999999988666666 44443 344332 23467888888888887765
No 107
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=90.32 E-value=0.65 Score=38.58 Aligned_cols=59 Identities=12% Similarity=0.145 Sum_probs=51.6
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCC
Q 017343 245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKD 303 (373)
Q Consensus 245 ~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~ 303 (373)
...++..+++.++....-+..+..+++|+++++++....++.+++.+.|+++..+.+..
T Consensus 71 l~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~ 129 (290)
T KOG4314|consen 71 LLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE 129 (290)
T ss_pred HHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence 34458888888888888889999999999999999999999999999999999876543
No 108
>PRK02237 hypothetical protein; Provisional
Probab=90.05 E-value=3 Score=31.07 Aligned_cols=41 Identities=15% Similarity=0.007 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 262 TSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 262 ~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
.-.+.++++++.+-|++|+...++|.++.++|+.+..+.++
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 33888899999999999999999999999999977765443
No 109
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=89.35 E-value=1.6 Score=39.07 Aligned_cols=133 Identities=19% Similarity=0.155 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhc---cCCCcHHHHHHHHHHHHHHHHHHHHH-hc-----------cc-CccchH
Q 017343 12 TLLGLGLGQFLSLLITSTGFSSSELARK---GINAPTSQSFFNYVLLAIVYGSLMLY-RR-----------QP-LKAKWY 75 (373)
Q Consensus 12 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~---~~~~p~~~~~~r~~~~~~~l~~~~~~-~~-----------~~-~~~~~~ 75 (373)
...|.++....+++.+.=|.+.+.+.++ +-.+|+...+--.-...+.+++..+. -+ .. ....++
T Consensus 162 ~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~r 241 (349)
T KOG1443|consen 162 NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILR 241 (349)
T ss_pred eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHH
Confidence 3557778888888889999999888765 33455544433333333334443222 11 01 111222
Q ss_pred HHHHHHHHHHHH---HHHHHHHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343 76 YYLILGLIDVEG---NFLVVKAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV 144 (373)
Q Consensus 76 ~~~~~g~~~~~~---~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 144 (373)
....+++.+... ...-+.=+..++.-..++..-..-+.+.+++..+++++++...|.|..++..|+..=
T Consensus 242 v~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 242 VIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 222223333222 333344445566555555555667888899999999999999999999999999876
No 110
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=89.23 E-value=2.7 Score=31.26 Aligned_cols=41 Identities=17% Similarity=-0.001 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 262 TSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 262 ~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
.-.+.++++++.+-+++|+...++|..+.++|+.+..+.++
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 33888999999999999999999999999999988776553
No 111
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=87.63 E-value=6.9 Score=34.69 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=48.4
Q ss_pred HHHHhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecC
Q 017343 245 PILLKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGG 300 (373)
Q Consensus 245 ~~~~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~ 300 (373)
...+..+++....+..-...+++.+++.-+++.+++..+|+|+..+.+|++.+-..
T Consensus 104 ~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~ 159 (372)
T KOG3912|consen 104 YVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSL 159 (372)
T ss_pred HHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeee
Confidence 33347788888888877779999999999999999999999999999999988754
No 112
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=85.17 E-value=13 Score=34.06 Aligned_cols=136 Identities=15% Similarity=0.086 Sum_probs=68.6
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHhccCChhH-HHHHHHHHHHHHHHHHH-HHhhcccccc----ccccccchhHHHH
Q 017343 159 SPRKGDALVIAGATLYAVSNVSEEFLVKKADRIE-LMAFLGLFGGIISAVQI-SILERKELQS----IHWSAGAALPFFG 232 (373)
Q Consensus 159 ~~~~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~ 232 (373)
+...|+++..+++++.+.+.+-.||.. +-+ ++ .=..+.+++-++. |.. ....-+++.. .+.+......+.|
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk-~Ws-WEs~Wlv~gi~swli~-P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G 80 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKVK-GWS-WESYWLVQGIFSWLIV-PWLWALLAIPDFFSIYSATPASTLFWTFLFG 80 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhcC-Ccc-HHHHHHHHHHHHHHHH-HHHHHHHhCCcHHHHHHhCChhHHHHHHHHH
Confidence 346899999999999999999888753 222 22 2222334444433 322 2222222211 1111111222222
Q ss_pred H--HHHHHHHHHHHHHHHhhcchhHH-HHHHHHHHHHHHHHHHHHhc-------ccccHHHHHHHHHHHHHhheeecCC
Q 017343 233 Y--ALAMFLFYSFVPILLKTNGATML-NLSLLTSDMWAVLIRIGAYH-------EKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 233 ~--~~~~~~~~~~~~~~~~~~~a~~~-~~~~~~~pv~~~l~~~~~~~-------e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
. +++...|-..+ |+.+.... ++..-+..+++.++--++.| ++-....++|.++.++|+.+..+.-
T Consensus 81 ~lWGIGgltfGl~m----ryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG 155 (344)
T PF06379_consen 81 VLWGIGGLTFGLAM----RYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG 155 (344)
T ss_pred HHHhcchhhHhHHH----HHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence 1 23333333333 44443332 22222334555555444433 2223467889999999999987644
No 113
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=82.59 E-value=2.6 Score=31.23 Aligned_cols=32 Identities=16% Similarity=0.226 Sum_probs=27.1
Q ss_pred HHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 267 AVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 267 ~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
-..++.++++|++++....|.++++.+++...
T Consensus 76 F~~Fsv~~l~E~l~~n~l~af~~i~~av~fiF 107 (108)
T PF04342_consen 76 FAPFSVFYLGEPLKWNYLWAFLCILGAVYFIF 107 (108)
T ss_pred eHHHHHHHhCCCccHHHHHHHHHHHHhhheee
Confidence 34677889999999999999999999987653
No 114
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=82.37 E-value=3.1 Score=30.67 Aligned_cols=39 Identities=18% Similarity=0.453 Sum_probs=32.1
Q ss_pred hhhHHHHHHHHHhccccceeeeehhhhheecceeeeecc
Q 017343 110 TIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSD 148 (373)
Q Consensus 110 ~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~ 148 (373)
......+..++.-+.|+++..|+|..+|++|+.++....
T Consensus 68 yI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 68 YIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 444555677778899999999999999999999988743
No 115
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=81.41 E-value=0.47 Score=41.56 Aligned_cols=76 Identities=8% Similarity=0.155 Sum_probs=0.0
Q ss_pred HHHHhccchhHHHHhhcchhhHHH-HHHHHHhcccc-ceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHH
Q 017343 92 VKAYQYTSLTSVMLLDCWTIPCVM-FLTWIFLKTKY-RYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIA 169 (373)
Q Consensus 92 ~~al~~~~~~~~~~i~~~~p~~~~-ll~~~~l~e~~-~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~ 169 (373)
|+-+.-.+-+..+++.+...+.++ ++-.+++|+|+ -+.-.++++++.+-+.+...-.. .++...+|+++.++
T Consensus 41 ~iimsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tL------tGQ~LF~Gi~~l~l 114 (381)
T PF05297_consen 41 FIIMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTL------TGQTLFVGIVILFL 114 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHh------hccHHHHHHHHHHH
Confidence 344444555555666666666555 44444556554 34455555554444333332111 13344577766655
Q ss_pred HHHH
Q 017343 170 GATL 173 (373)
Q Consensus 170 a~~~ 173 (373)
+++.
T Consensus 115 ~~lL 118 (381)
T PF05297_consen 115 CCLL 118 (381)
T ss_dssp ----
T ss_pred HHHH
Confidence 5443
No 116
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=81.23 E-value=2.4 Score=37.43 Aligned_cols=134 Identities=16% Similarity=0.168 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHH---HHhc---------------ccC
Q 017343 9 TKKTLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLM---LYRR---------------QPL 70 (373)
Q Consensus 9 ~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~---~~~~---------------~~~ 70 (373)
..+...|+.+..+..+..+.++.......++..-++-+..++..++....++... .... ...
T Consensus 159 ~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~v 238 (330)
T KOG1583|consen 159 FFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKV 238 (330)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccc
Confidence 3455678887777778888888888888877555667777776666554433221 1100 011
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhc----cchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 71 KAKWYYYLILGLIDVEGNFLVVKAYQY----TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 71 ~~~~~~~~~~g~~~~~~~~~~~~al~~----~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
+..|+.++ .++..+++...+..- ++.-++++...+--.+..+++.+.++..+++.+|+|..+.+.|..+...
T Consensus 239 P~~~~yLl----~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 239 PSMWVYLL----FNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred cHHHHHHH----HHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22222222 222222222222221 3333445555666677778888888889999999999988888887664
No 117
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=80.66 E-value=1.9 Score=36.66 Aligned_cols=96 Identities=14% Similarity=0.122 Sum_probs=66.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhc-c--------cCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHH
Q 017343 44 PTSQSFFNYVLLAIVYGSLMLYRR-Q--------PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCV 114 (373)
Q Consensus 44 p~~~~~~r~~~~~~~l~~~~~~~~-~--------~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~ 114 (373)
-+.-.++..+++..+++.+-.... + .+.......++.|++.++..++.-+.++-++.+..+++..+.-...
T Consensus 185 d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~ 264 (309)
T COG5070 185 DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPI 264 (309)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChH
Confidence 355667777777777666533322 1 1111123455667776666888888888899999999999888888
Q ss_pred HHHHHHHhccccceeeeehhhhhee
Q 017343 115 MFLTWIFLKTKYRYKKITGVVVCVA 139 (373)
Q Consensus 115 ~ll~~~~l~e~~~~~~~~~~~l~~~ 139 (373)
.+.+.++++|+.++..+.+++++++
T Consensus 265 alaGlvffdap~nf~si~sillGfl 289 (309)
T COG5070 265 ALAGLVFFDAPVNFLSIFSILLGFL 289 (309)
T ss_pred HHhhhhhcCCchhHHHHHHHHHHHH
Confidence 8888888888877777666665544
No 118
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=79.86 E-value=21 Score=34.54 Aligned_cols=23 Identities=4% Similarity=-0.102 Sum_probs=18.8
Q ss_pred ccHHHHHHHHHHHHHhheeecCC
Q 017343 279 VDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 279 ~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
++..|++.++++++|++++.+..
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~ 276 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAP 276 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Confidence 78899999999999987775543
No 119
>PRK02237 hypothetical protein; Provisional
Probab=79.09 E-value=12 Score=28.06 Aligned_cols=38 Identities=11% Similarity=0.410 Sum_probs=32.1
Q ss_pred chhhHHHHHHHHHhccccceeeeehhhhheecceeeee
Q 017343 109 WTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIF 146 (373)
Q Consensus 109 ~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~ 146 (373)
...+...+..+..-++||++..++|..++++|+.++..
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 34455557888889999999999999999999988865
No 120
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=77.21 E-value=11 Score=28.14 Aligned_cols=40 Identities=15% Similarity=0.395 Sum_probs=33.9
Q ss_pred cchhhHHHHHHHHHhccccceeeeehhhhheecceeeeec
Q 017343 108 CWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFS 147 (373)
Q Consensus 108 ~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~ 147 (373)
....+...+..+.+-++||++..++|..++++|+.++...
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3455556678888999999999999999999999998874
No 121
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=75.93 E-value=24 Score=26.17 Aligned_cols=39 Identities=13% Similarity=-0.020 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCC
Q 017343 264 DMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 264 pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
.+.++++.+++-+..|+...++|.++.++|+.+....++
T Consensus 69 I~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 69 IAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 788899999999999999999999999999888776543
No 122
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=74.78 E-value=13 Score=27.72 Aligned_cols=52 Identities=10% Similarity=0.165 Sum_probs=33.7
Q ss_pred HHHhccchhHHHHhhcchh-hHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343 93 KAYQYTSLTSVMLLDCWTI-PCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV 144 (373)
Q Consensus 93 ~al~~~~~~~~~~i~~~~p-~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 144 (373)
.+.+..+.+.--+++=... ...+.++.+++||++++.+..|.+..+.++..+
T Consensus 54 iG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 54 IGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 3444444544444443333 334477889999999999998888776666554
No 123
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=74.04 E-value=64 Score=31.99 Aligned_cols=40 Identities=18% Similarity=-0.007 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHhcccccHHH-HHHHHHHHHHhhee
Q 017343 258 LSLLTSDMWAVLIRIGAYHEKVDWLY-FIAFAAVAVGLIIY 297 (373)
Q Consensus 258 ~~~~~~pv~~~l~~~~~~~e~~~~~~-~~G~~li~~g~~l~ 297 (373)
+.....|+-+.++|.+.-.-...... +.|+++++.+++..
T Consensus 351 ~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 351 VFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 33444566677777764333333333 34444444444443
No 124
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=73.46 E-value=33 Score=25.09 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 264 DMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 264 pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
..+-+.++.+.++|++.+..+.|..++..|+.+..
T Consensus 80 L~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 80 LAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 33445678899999999999999999999987654
No 125
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=66.12 E-value=0.56 Score=41.77 Aligned_cols=130 Identities=8% Similarity=0.043 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHh-hccc-----cc----ccc-ccccchhHHHHHHHH
Q 017343 168 IAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISIL-ERKE-----LQ----SIH-WSAGAALPFFGYALA 236 (373)
Q Consensus 168 l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~----~~~-~~~~~~~~~~~~~~~ 236 (373)
+++.+||+.....+|-.-++-...+..++=+.++.++..++..+. +... -+ ... -++..+...+..++.
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGvv 81 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGVV 81 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhHh
Confidence 456778888777777554332222234444444444433332221 1111 11 111 112222222222223
Q ss_pred HHHHHHHHHHHHhhcchhHHHHH-HHHHHHHHHHHHHHHhccccc--HHHHHHHHHHHHHhheee
Q 017343 237 MFLFYSFVPILLKTNGATMLNLS-LLTSDMWAVLIRIGAYHEKVD--WLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 237 ~~~~~~~~~~~~~~~~a~~~~~~-~~~~pv~~~l~~~~~~~e~~~--~~~~~G~~li~~g~~l~~ 298 (373)
.-..|.+..+.....+..+.-.+ ..+..++++++.|+ +..+.+ ..-+.|..++++++++-.
T Consensus 82 fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga 145 (336)
T PF07168_consen 82 FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGA 145 (336)
T ss_pred hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHH
Confidence 33444555544444444433322 11224445555554 334433 244558888887777644
No 126
>PRK09776 putative diguanylate cyclase; Provisional
Probab=60.39 E-value=1.5e+02 Score=32.18 Aligned_cols=24 Identities=13% Similarity=-0.087 Sum_probs=12.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhc
Q 017343 163 GDALVIAGATLYAVSNVSEEFLVK 186 (373)
Q Consensus 163 G~~l~l~a~~~~a~~~v~~~~~~~ 186 (373)
..+++++..+...+...+.++..+
T Consensus 71 ~~~~~~~~~~~~~~~~~ll~~~~~ 94 (1092)
T PRK09776 71 NLTWTTINLVEAVVGAVLLRKLLP 94 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 445555555545555555555543
No 127
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=60.17 E-value=80 Score=32.95 Aligned_cols=45 Identities=16% Similarity=0.198 Sum_probs=30.7
Q ss_pred hhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceee
Q 017343 100 LTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV 144 (373)
Q Consensus 100 ~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 144 (373)
.+.+.++..+.|+-.+.++.+.+.+|.+...+.+.+-.++|.+.+
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 456677888899999988887766665444455555556666544
No 128
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=59.24 E-value=2.7 Score=36.60 Aligned_cols=54 Identities=9% Similarity=0.006 Sum_probs=44.6
Q ss_pred HhhcchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCC
Q 017343 248 LKTNGATMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 248 ~~~~~a~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
.++++-+.+.+......+...+++|++++.+-.+.++.|.++.+.|+++....+
T Consensus 99 yQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sD 152 (336)
T KOG2766|consen 99 YQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSD 152 (336)
T ss_pred hhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEee
Confidence 366666666666666677888999999999999999999999999999887654
No 129
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=57.86 E-value=74 Score=26.93 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=20.3
Q ss_pred HHHHHHhcccccHHHHHHHHHHH--HHhheeec
Q 017343 269 LIRIGAYHEKVDWLYFIAFAAVA--VGLIIYSG 299 (373)
Q Consensus 269 l~~~~~~~e~~~~~~~~G~~li~--~g~~l~~~ 299 (373)
.+|..++++-.=+...+|.++.+ +|.+...+
T Consensus 134 ~iG~~L~t~y~l~fe~~silLLvAmIGAI~La~ 166 (198)
T PRK06638 134 AIGILLFTDYLLPFELASVLLLVAMVGAIVLAR 166 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 45777788877777888876554 35555443
No 130
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=56.82 E-value=15 Score=27.24 Aligned_cols=38 Identities=8% Similarity=0.063 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhee
Q 017343 260 LLTSDMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIY 297 (373)
Q Consensus 260 ~~~~pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~ 297 (373)
..+.-.++.+.|..+-.|......++|..++++|+.+.
T Consensus 86 nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 86 NSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred chhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 33457888999998655667778899999999999765
No 131
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=55.93 E-value=1.3e+02 Score=25.60 Aligned_cols=33 Identities=6% Similarity=0.330 Sum_probs=17.4
Q ss_pred cCccchHHHHHHHHHHHHHHHHHHHHHhccchh
Q 017343 69 PLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLT 101 (373)
Q Consensus 69 ~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~ 101 (373)
..+..+++.++.+++.+...+..+......++.
T Consensus 141 ~~r~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~ 173 (206)
T PF06570_consen 141 KKRPSWWKYILISVLAMVLWIVIFVLTSFLPPV 173 (206)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 345556666666665555544444444445544
No 132
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=55.53 E-value=84 Score=26.15 Aligned_cols=48 Identities=8% Similarity=0.066 Sum_probs=29.0
Q ss_pred ccCccchHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhcchhhHHHHHH
Q 017343 68 QPLKAKWYYYLILGLIDVEGNFLVVKAYQYTSLTSVMLLDCWTIPCVMFLT 118 (373)
Q Consensus 68 ~~~~~~~~~~~~~g~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~ll~ 118 (373)
+..|..+|++++......+...+.+.+-.++|.+..-. +.|+...+.+
T Consensus 155 ~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~---L~pi~l~IiG 202 (226)
T COG4858 155 NSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQ---LPPIALTIIG 202 (226)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcC---CchHHHHHHH
Confidence 34556677777777766666777777777777665433 3444444443
No 133
>PF15325 MRI: Modulator of retrovirus infection
Probab=54.32 E-value=32 Score=25.03 Aligned_cols=8 Identities=50% Similarity=0.879 Sum_probs=4.0
Q ss_pred HHHHhhee
Q 017343 290 VAVGLIIY 297 (373)
Q Consensus 290 i~~g~~l~ 297 (373)
|-+|+++-
T Consensus 13 VALGILIE 20 (106)
T PF15325_consen 13 VALGILIE 20 (106)
T ss_pred HHHHHhhc
Confidence 34555554
No 134
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=51.91 E-value=59 Score=23.83 Aligned_cols=32 Identities=9% Similarity=0.258 Sum_probs=25.1
Q ss_pred HHHHHHHHHhccccceeeeehhhhheecceee
Q 017343 113 CVMFLTWIFLKTKYRYKKITGVVVCVAGLVTV 144 (373)
Q Consensus 113 ~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~ 144 (373)
....++.+.+||++++..+.+..+...|+.++
T Consensus 82 iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 82 IFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 34478899999999999998887777666554
No 135
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=51.86 E-value=1.2e+02 Score=23.88 Aligned_cols=15 Identities=27% Similarity=0.394 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHhhee
Q 017343 283 YFIAFAAVAVGLIIY 297 (373)
Q Consensus 283 ~~~G~~li~~g~~l~ 297 (373)
.++|..+++.|++..
T Consensus 89 ~i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 89 IIIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHHHHHHHH
Confidence 344555555555433
No 136
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=51.03 E-value=1.9e+02 Score=26.12 Aligned_cols=45 Identities=9% Similarity=0.027 Sum_probs=27.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc-cCChhHHHHHHHHHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVK-KADRIELMAFLGLFGGIISA 206 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 206 (373)
.+.+..++..+..++.-.+.++..+ +.++..+....++.+.+++.
T Consensus 6 ~~~~~i~~~s~lg~~~P~~~~~~~~~~~~~~~l~~~~~fa~GvlL~ 51 (317)
T PF02535_consen 6 VAILAIFIVSLLGGLLPLLIRKFSKNRLNKRILSLLNAFAAGVLLG 51 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHH
Confidence 4555666666666666677666655 45555555555555555543
No 137
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=49.66 E-value=1.1e+02 Score=28.17 Aligned_cols=21 Identities=14% Similarity=-0.130 Sum_probs=10.7
Q ss_pred HHHHHHhccc------ccHHHHHHHHH
Q 017343 269 LIRIGAYHEK------VDWLYFIAFAA 289 (373)
Q Consensus 269 l~~~~~~~e~------~~~~~~~G~~l 289 (373)
.+.|++.+.. |++..=+|.+=
T Consensus 244 ~I~~il~~g~~g~W~FPNL~eDvGfle 270 (372)
T KOG2927|consen 244 GITWILTGGKHGFWLFPNLTEDVGFLE 270 (372)
T ss_pred HHHHHHhCCCCceEeccchhhhhhHHH
Confidence 4445555533 55555556443
No 138
>PRK11715 inner membrane protein; Provisional
Probab=44.42 E-value=3e+02 Score=26.56 Aligned_cols=40 Identities=0% Similarity=-0.100 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGGII 204 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (373)
.|+++..+.-+++-+.-++.| .+.+|+++...-...+...
T Consensus 306 YgiLFI~LTF~~fFlfE~~~~---~~iHpiQYlLVGlAl~lFY 345 (436)
T PRK11715 306 YAILFIALTFAAFFLFELLKK---LRIHPVQYLLVGLALVLFY 345 (436)
T ss_pred HHHHHHHHHHHHHHHHHHhcC---ceecHHHHHHHHHHHHHHH
Confidence 565555544444444333333 3678888765444443333
No 139
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=42.20 E-value=3.2e+02 Score=26.30 Aligned_cols=32 Identities=13% Similarity=0.124 Sum_probs=23.4
Q ss_pred cchhHHHHhhcchhhHHHHHHHHHhcccccee
Q 017343 98 TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYK 129 (373)
Q Consensus 98 ~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~ 129 (373)
+..-.++++..+.-+|.++...+++-+|+.|.
T Consensus 398 Lq~EdyALL~GSl~LF~iLa~vM~~TRkiDWy 429 (430)
T PF06123_consen 398 LQSEDYALLMGSLLLFIILALVMYLTRKIDWY 429 (430)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHheeeccccc
Confidence 34556777777777888887777888887764
No 140
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=39.99 E-value=3.5e+02 Score=26.07 Aligned_cols=38 Identities=5% Similarity=-0.104 Sum_probs=20.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHH
Q 017343 162 KGDALVIAGATLYAVSNVSEEFLVKKADRIELMAFLGLFGG 202 (373)
Q Consensus 162 ~G~~l~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~ 202 (373)
.|+++..+.-+++-+.-++.| ++.+|.++...-...+.
T Consensus 300 YgiLFI~LTF~~fflfE~~~~---~~iHpiQY~LVGlAl~l 337 (430)
T PF06123_consen 300 YGILFIGLTFLAFFLFELLSK---LRIHPIQYLLVGLALVL 337 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHhc---CcccHHHHHHHHHHHHH
Confidence 566555555444444444443 36788886654433333
No 141
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=37.36 E-value=3.9e+02 Score=25.79 Aligned_cols=15 Identities=7% Similarity=0.065 Sum_probs=7.8
Q ss_pred HHHHHHHHHHhheee
Q 017343 284 FIAFAAVAVGLIIYS 298 (373)
Q Consensus 284 ~~G~~li~~g~~l~~ 298 (373)
.++++++++.++.+.
T Consensus 179 ~~a~~v~l~~i~~~~ 193 (437)
T TIGR00939 179 GTPCVVQLICIVCYL 193 (437)
T ss_pred HHHHHHHHHHHHHHH
Confidence 445555555555543
No 142
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=36.90 E-value=2.1e+02 Score=25.24 Aligned_cols=12 Identities=25% Similarity=0.456 Sum_probs=6.6
Q ss_pred heecceeeeecc
Q 017343 137 CVAGLVTVIFSD 148 (373)
Q Consensus 137 ~~~Gv~l~~~~~ 148 (373)
.++|++++...+
T Consensus 17 ~v~Gi~Lf~~A~ 28 (249)
T PF10225_consen 17 FVLGIVLFFLAP 28 (249)
T ss_pred HHHHHHHHHHhH
Confidence 345666665543
No 143
>KOG4434 consensus Molecular chaperone SEC63, endoplasmic reticulum translocon component [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=35.60 E-value=8.8 Score=35.16 Aligned_cols=13 Identities=31% Similarity=0.353 Sum_probs=7.5
Q ss_pred cccCCCCCccccc
Q 017343 359 ENKNEGYDDALGK 371 (373)
Q Consensus 359 ~~~~~~~~~~~~~ 371 (373)
+.+....||++|+
T Consensus 367 ~~~~ddddd~EWe 379 (520)
T KOG4434|consen 367 DEKQDDDDDAEWE 379 (520)
T ss_pred ccccccccHHHHH
Confidence 4445555666665
No 144
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=35.50 E-value=28 Score=22.41 Aligned_cols=44 Identities=20% Similarity=0.332 Sum_probs=33.1
Q ss_pred eeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHhc
Q 017343 130 KITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGATLYAVSNVSEEFLVK 186 (373)
Q Consensus 130 ~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~~~a~~~v~~~~~~~ 186 (373)
..+|..+.++|++++..|+ .|.+..+++....|...-..|+..+
T Consensus 5 ~v~G~~lv~~Gii~~~lPG-------------pG~l~i~~GL~iLa~ef~wArr~l~ 48 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPG-------------PGLLVIFLGLAILATEFPWARRLLR 48 (53)
T ss_pred hhHHHHHHHHHHHhhcCCC-------------CcHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3467778888999888755 3777788888888888777777654
No 145
>PF15345 TMEM51: Transmembrane protein 51
Probab=33.79 E-value=20 Score=30.78 Aligned_cols=19 Identities=5% Similarity=0.101 Sum_probs=13.8
Q ss_pred HHHHHHHHHhheeecCCCC
Q 017343 285 IAFAAVAVGLIIYSGGDKD 303 (373)
Q Consensus 285 ~G~~li~~g~~l~~~~~~~ 303 (373)
.|+++.++++++-.+.+++
T Consensus 67 ~Gv~LLLLSICL~IR~KRr 85 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRR 85 (233)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3788888888887765543
No 146
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=32.89 E-value=89 Score=25.35 Aligned_cols=68 Identities=15% Similarity=0.046 Sum_probs=41.1
Q ss_pred HHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeehhhhheecceeeeeccCccCCCCCCCCCchhhHHHHHHHH
Q 017343 93 KAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITGVVVCVAGLVTVIFSDVHAGDRGSGSSPRKGDALVIAGAT 172 (373)
Q Consensus 93 ~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~~G~~l~l~a~~ 172 (373)
..++.++++.+-.+.-.-|+.+.=- ++.|+.++...+ +.+..-....++.+++
T Consensus 90 m~v~KtsP~LYr~LGIfLPLITTNC-------------------aVLgvaLln~~~--------~~~f~qsv~~gf~a~l 142 (193)
T COG4657 90 MVVRKTSPTLYRLLGIFLPLITTNC-------------------AVLGVALLNINE--------GHNFLQSVVYGFGAAL 142 (193)
T ss_pred HHHHccCHHHHHHHHHhhhhHhhch-------------------HHHHHHHHHhhh--------hhhHHHHHHHHhhhHh
Confidence 5566666666666555555554311 234555555433 2334567788888888
Q ss_pred HHHHHHHHHHHHhcc
Q 017343 173 LYAVSNVSEEFLVKK 187 (373)
Q Consensus 173 ~~a~~~v~~~~~~~~ 187 (373)
.|++..++.....++
T Consensus 143 GfslvmvlfA~iRER 157 (193)
T COG4657 143 GFSLVMVLFAAIRER 157 (193)
T ss_pred hHHHHHHHHHHHHHH
Confidence 888888877665543
No 147
>KOG2568 consensus Predicted membrane protein [Function unknown]
Probab=31.95 E-value=5.1e+02 Score=25.57 Aligned_cols=23 Identities=9% Similarity=0.118 Sum_probs=13.2
Q ss_pred HHHHHHHHhheeecCCCCCCCcc
Q 017343 286 AFAAVAVGLIIYSGGDKDDDQPC 308 (373)
Q Consensus 286 G~~li~~g~~l~~~~~~~~~~~~ 308 (373)
....++.-++.+.|++..++++-
T Consensus 427 ~l~~~iLvvI~~LWrPS~nn~ry 449 (518)
T KOG2568|consen 427 LLFFLILVVIMFLWRPSQNNQRY 449 (518)
T ss_pred HHHHHHHHHHHHhcCCCCCCccc
Confidence 44555555556667776655553
No 148
>PRK04214 rbn ribonuclease BN/unknown domain fusion protein; Reviewed
Probab=31.77 E-value=4.6e+02 Score=25.01 Aligned_cols=20 Identities=10% Similarity=-0.257 Sum_probs=8.6
Q ss_pred ccCccchHHHHHHHHHHHHH
Q 017343 68 QPLKAKWYYYLILGLIDVEG 87 (373)
Q Consensus 68 ~~~~~~~~~~~~~g~~~~~~ 87 (373)
+..+.+|+..+.-|++....
T Consensus 202 Pn~~v~~r~al~Gai~a~vl 221 (412)
T PRK04214 202 PNHFVPLRHALPGALLTAVL 221 (412)
T ss_pred CCCccchHHhHHHHHHHHHH
Confidence 33344455444444444333
No 149
>PRK11715 inner membrane protein; Provisional
Probab=31.58 E-value=4.9e+02 Score=25.19 Aligned_cols=32 Identities=13% Similarity=0.088 Sum_probs=23.3
Q ss_pred cchhHHHHhhcchhhHHHHHHHHHhcccccee
Q 017343 98 TSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYK 129 (373)
Q Consensus 98 ~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~ 129 (373)
+..-.++++..+..+|.++...+++-+|+.|.
T Consensus 404 Lq~EDyALL~GSllLF~~La~vM~~TR~iDWy 435 (436)
T PRK11715 404 LQSEDYALLLGSLLLFAVLALVMFLTRRIDWY 435 (436)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHheeeccccc
Confidence 34566777777777888888888877777764
No 150
>PF15102 TMEM154: TMEM154 protein family
Probab=31.19 E-value=48 Score=26.38 Aligned_cols=17 Identities=0% Similarity=-0.218 Sum_probs=7.9
Q ss_pred HHHHHHHHHhheeecCC
Q 017343 285 IAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 285 ~G~~li~~g~~l~~~~~ 301 (373)
+++++++..++++.+.+
T Consensus 67 LLvlLLl~vV~lv~~~k 83 (146)
T PF15102_consen 67 LLVLLLLSVVCLVIYYK 83 (146)
T ss_pred HHHHHHHHHHHheeEEe
Confidence 34444444455554433
No 151
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=30.93 E-value=4.5e+02 Score=24.55 Aligned_cols=33 Identities=9% Similarity=-0.067 Sum_probs=17.6
Q ss_pred HHHHHHHHHhcccccHHHHHHHHHHHHHhheee
Q 017343 266 WAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYS 298 (373)
Q Consensus 266 ~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~ 298 (373)
.+.+.+++.-.--......+++++.+.++++..
T Consensus 355 ~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 355 VGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 333444443222344556677777777766653
No 152
>PRK12405 electron transport complex RsxE subunit; Provisional
Probab=30.29 E-value=3.7e+02 Score=23.42 Aligned_cols=119 Identities=13% Similarity=0.017 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc--ccCccchHHHHHHHHHHHHH-H
Q 017343 12 TLLGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR--QPLKAKWYYYLILGLIDVEG-N 88 (373)
Q Consensus 12 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~g~~~~~~-~ 88 (373)
...++.+|+..++....+......+.+. ..++.-...+-..++.++...-+..++ +...+....++.+-..++.. .
T Consensus 35 ~~nalgmGlA~~~Vl~~S~~~~sllr~~-i~~~lRi~v~IlvIA~~V~~v~~~L~a~~p~l~~~LGiflpLIv~NCiVLg 113 (231)
T PRK12405 35 ATNALGLGLATTLVLVCSNLTVSLLRKW-IPKEIRIPIFVMIIASFVTVVQLLMNAYAYGLYQSLGIFIPLIVTNCIILG 113 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 3445666666666666666666666542 112233333334444444444333333 33344455555555555544 2
Q ss_pred HHHHHHHhccchhHH--HHhhcchhhHHHHHHHHHhccccceeeee
Q 017343 89 FLVVKAYQYTSLTSV--MLLDCWTIPCVMFLTWIFLKTKYRYKKIT 132 (373)
Q Consensus 89 ~~~~~al~~~~~~~~--~~i~~~~p~~~~ll~~~~l~e~~~~~~~~ 132 (373)
-....+.++. ...+ --+.+..-...+++..-..||++..-.+.
T Consensus 114 rae~~a~~~~-~~~s~~dglg~GlGf~laL~ll~~iRE~Lg~Gtlf 158 (231)
T PRK12405 114 RAEAFASKNG-VLLSALDGLGMGLGFTLALVVLGAIREILGNGTLF 158 (231)
T ss_pred HHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 2222243432 2211 11112122223344444678999888776
No 153
>PF11295 DUF3096: Protein of unknown function (DUF3096); InterPro: IPR021446 This entry is represented by the archaeal Thermoproteus tenax spherical virus 1, Orf18. The characteristics of the protein distribution suggest prophage matches and lateral genetic transfer in addition to the phage matches.
Probab=30.28 E-value=69 Score=19.08 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHHHHHhhe
Q 017343 264 DMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLII 296 (373)
Q Consensus 264 pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l 296 (373)
|+.+.+.|++++--+==.+.++|.-+++.|+.-
T Consensus 1 pi~aliaGiLiLi~PrllnyiVaiyLI~~G~lg 33 (39)
T PF11295_consen 1 PILALIAGILILIMPRLLNYIVAIYLIVIGLLG 33 (39)
T ss_pred CHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555444444556677777777653
No 154
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=28.37 E-value=4.5e+02 Score=23.81 Aligned_cols=40 Identities=13% Similarity=0.006 Sum_probs=22.6
Q ss_pred HHHhccchhHHHHhhcchhhHHHHHHHHHhccccceeeeeh
Q 017343 93 KAYQYTSLTSVMLLDCWTIPCVMFLTWIFLKTKYRYKKITG 133 (373)
Q Consensus 93 ~al~~~~~~~~~~i~~~~p~~~~ll~~~~l~e~~~~~~~~~ 133 (373)
.+++|.... ...+..++|+++.+...+.....-++.+.++
T Consensus 183 a~ls~~~l~-sePf~~LT~iv~sfi~~~i~~~~~~R~~lLg 222 (299)
T PF05884_consen 183 AGLSHLYLS-SEPFIALTPIVSSFIYPLIAGHGTNRQKLLG 222 (299)
T ss_pred HHhhccccc-CCcHHHHHHHHHHHHHHHHccCCcchHHHHH
Confidence 455554444 3777777888887666655544333333333
No 155
>PF03631 Virul_fac_BrkB: Virulence factor BrkB; InterPro: IPR017039 This entry represents the uncharacterised protein family UPF0761. It includes the E. coli gene product of yihY, and was previously thought to be a family of tRNA-processing ribonuclease BN proteins []. This has been shown to be incorrect [].; GO: 0004540 ribonuclease activity
Probab=27.91 E-value=4.1e+02 Score=23.19 Aligned_cols=14 Identities=0% Similarity=0.176 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHH
Q 017343 46 SQSFFNYVLLAIVY 59 (373)
Q Consensus 46 ~~~~~r~~~~~~~l 59 (373)
.....|..+..++.
T Consensus 160 ~~~~~~~~~~~~~~ 173 (260)
T PF03631_consen 160 LWNLIRWLVSFLLL 173 (260)
T ss_pred HHHHHHHHHHHHHH
Confidence 35666765444433
No 156
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=26.04 E-value=4.3e+02 Score=25.24 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHhcccccHHHHHHHHHHHHHhheeecCCCCCCC
Q 017343 264 DMWAVLIRIGAYHEKVDWLYFIAFAAVAVGLIIYSGGDKDDDQ 306 (373)
Q Consensus 264 pv~~~l~~~~~~~e~~~~~~~~G~~li~~g~~l~~~~~~~~~~ 306 (373)
+.++.++..+.+.. .....++..+.+.++.++.+..|+.++
T Consensus 390 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (435)
T PRK10435 390 SVLGCVFCFIALMG--ASSFELAGTFIVSLIILMFYARKMHER 430 (435)
T ss_pred HHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 55555555554432 233344444455555444454444333
No 157
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=25.48 E-value=2.1e+02 Score=24.27 Aligned_cols=17 Identities=24% Similarity=0.387 Sum_probs=9.6
Q ss_pred ccchHHHHHHHHHHHHH
Q 017343 71 KAKWYYYLILGLIDVEG 87 (373)
Q Consensus 71 ~~~~~~~~~~g~~~~~~ 87 (373)
.-..+.++++|++..+.
T Consensus 177 ~l~~~~~iiig~i~~~~ 193 (206)
T PF06570_consen 177 VLPPWVYIIIGVIAFAL 193 (206)
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 33455566666665555
No 158
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=25.40 E-value=5.9e+02 Score=24.60 Aligned_cols=42 Identities=24% Similarity=0.206 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHhccc-ccHHHHHHHHHHHHHhheeecCCC
Q 017343 260 LLTSDMWAVLIRIGAYHEK-VDWLYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 260 ~~~~pv~~~l~~~~~~~e~-~~~~~~~G~~li~~g~~l~~~~~~ 302 (373)
..+.|+++.+ +++.++-. -.....-|++.+++|++++.+.+.
T Consensus 166 Gal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd 208 (448)
T COG2271 166 GALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRD 208 (448)
T ss_pred cchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3344555544 55555532 233345688888888888766443
No 159
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=24.97 E-value=8.4e+02 Score=25.77 Aligned_cols=13 Identities=15% Similarity=0.375 Sum_probs=6.2
Q ss_pred ccCccchHHHHHH
Q 017343 68 QPLKAKWYYYLIL 80 (373)
Q Consensus 68 ~~~~~~~~~~~~~ 80 (373)
+..++.|+....+
T Consensus 93 ~~Lrr~wrsV~rL 105 (810)
T TIGR00844 93 KYMLKHWVSVTML 105 (810)
T ss_pred HHHHHhHHHHHHH
Confidence 4445555544433
No 160
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=24.95 E-value=7e+02 Score=26.29 Aligned_cols=12 Identities=17% Similarity=0.357 Sum_probs=5.0
Q ss_pred HHHHHHHHHHHH
Q 017343 50 FNYVLLAIVYGS 61 (373)
Q Consensus 50 ~r~~~~~~~l~~ 61 (373)
.|+.....++..
T Consensus 339 ~R~~fi~~f~~~ 350 (843)
T PF09586_consen 339 YRWSFIFIFLIS 350 (843)
T ss_pred hHHHHHHHHHHH
Confidence 444444433333
No 161
>PRK10489 enterobactin exporter EntS; Provisional
Probab=24.71 E-value=5.8e+02 Score=23.85 Aligned_cols=18 Identities=11% Similarity=0.229 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHhheeec
Q 017343 282 LYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 282 ~~~~G~~li~~g~~l~~~ 299 (373)
..+.|++..+++++....
T Consensus 381 ~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 381 ASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 344555555555555443
No 162
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=24.57 E-value=6.8e+02 Score=24.61 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=7.6
Q ss_pred hhHHHHHHHHHHHHH
Q 017343 190 RIELMAFLGLFGGII 204 (373)
Q Consensus 190 ~~~~~~~~~~~~~~~ 204 (373)
|...+..+..+..++
T Consensus 331 P~~a~~~~~~i~~l~ 345 (507)
T TIGR00910 331 PVPLVIIQGIITSIA 345 (507)
T ss_pred cHHHHHHHHHHHHHH
Confidence 555555555555443
No 163
>PRK03554 tatA twin arginine translocase protein A; Provisional
Probab=23.79 E-value=13 Score=26.72 Aligned_cols=12 Identities=8% Similarity=0.149 Sum_probs=5.2
Q ss_pred HHHHHHHHHHhc
Q 017343 265 MWAVLIRIGAYH 276 (373)
Q Consensus 265 v~~~l~~~~~~~ 276 (373)
++-+++..++||
T Consensus 10 lIIlvIvLLlFG 21 (89)
T PRK03554 10 LIIAVIVVLLFG 21 (89)
T ss_pred HHHHHHHHHHhC
Confidence 333344444554
No 164
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=23.56 E-value=1.1e+02 Score=17.16 Aligned_cols=18 Identities=11% Similarity=0.383 Sum_probs=9.9
Q ss_pred cHHHHHHHHHHHHHhhee
Q 017343 280 DWLYFIAFAAVAVGLIIY 297 (373)
Q Consensus 280 ~~~~~~G~~li~~g~~l~ 297 (373)
++..++|.+++..+.+++
T Consensus 11 ~~~~~~G~~l~~~~~~~~ 28 (34)
T TIGR01167 11 SLLLLLGLLLLGLGGLLL 28 (34)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 455566775555544444
No 165
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=23.34 E-value=2.7e+02 Score=21.61 Aligned_cols=52 Identities=10% Similarity=-0.060 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHH
Q 017343 14 LGLGLGQFLSLLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLY 65 (373)
Q Consensus 14 ~~~~l~~~~~l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~ 65 (373)
+-++..+...+......++.+.+...-...|++++-+....-..+.++++++
T Consensus 57 ~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffaV~ly 108 (130)
T PF08627_consen 57 KLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFAVVLY 108 (130)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHHHHHH
Confidence 3333333333344444444554444434456666555444444445554443
No 166
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species.
Probab=23.32 E-value=6.4e+02 Score=23.83 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHH
Q 017343 171 ATLYAVSNVSEEFLVKKADRIELMAFLGLFGGIISAVQISI 211 (373)
Q Consensus 171 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (373)
++..-+...=.|+..|..++....+....++.++..+....
T Consensus 64 ai~LlLl~~Dlr~i~~~g~~~l~~F~~~~~g~viG~~va~~ 104 (378)
T PF05684_consen 64 AIPLLLLSADLRRILRLGGRLLLAFLIGAVGTVIGAVVAFL 104 (378)
T ss_pred HHHHHHHHccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455556677777777777888877777776655443
No 167
>TIGR02205 septum_zipA cell division protein ZipA. This model represents the full length of bacterial cell division protein ZipA. The N-terminal hydrophobic stretch is an uncleaved signal-anchor sequence. This is followed by an unconserved, variable length, low complexity region, and then a conserved C-terminal region of about 140 amino acids (see pfam04354) that interacts with the tubulin-like cell division protein FtsZ.
Probab=22.80 E-value=1.8e+02 Score=26.24 Aligned_cols=14 Identities=7% Similarity=0.204 Sum_probs=6.9
Q ss_pred HHHHHHHHHHhheee
Q 017343 284 FIAFAAVAVGLIIYS 298 (373)
Q Consensus 284 ~~G~~li~~g~~l~~ 298 (373)
++| +|.++++++.-
T Consensus 8 IvG-aiaI~aLl~hG 21 (284)
T TIGR02205 8 IVG-ILAIAALLFHG 21 (284)
T ss_pred HHH-HHHHHHHHHcc
Confidence 344 44555555443
No 168
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=22.59 E-value=4.5e+02 Score=21.76 Aligned_cols=27 Identities=7% Similarity=0.111 Sum_probs=14.9
Q ss_pred HHHHhhcchhhHHH-HHHHHHhccccce
Q 017343 102 SVMLLDCWTIPCVM-FLTWIFLKTKYRY 128 (373)
Q Consensus 102 ~~~~i~~~~p~~~~-ll~~~~l~e~~~~ 128 (373)
......+..|+..+ ++...+.++|...
T Consensus 59 ~~~~~~~~~P~a~~~~l~~~l~~~~~ai 86 (194)
T PF07698_consen 59 DISYFPYLIPVAAAAMLLTILIDPRLAI 86 (194)
T ss_pred cchhhhhhhHHHHHHHHHHHHhcchHHH
Confidence 33444455666655 5556666666543
No 169
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=22.09 E-value=5.1e+02 Score=25.02 Aligned_cols=13 Identities=15% Similarity=0.322 Sum_probs=6.4
Q ss_pred HHHHHHHHHHhhe
Q 017343 284 FIAFAAVAVGLII 296 (373)
Q Consensus 284 ~~G~~li~~g~~l 296 (373)
+.|+++++.+++.
T Consensus 417 ~~~~~~~i~~~~~ 429 (476)
T PLN00028 417 LMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHH
Confidence 4455555554443
No 170
>COG3965 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]
Probab=22.06 E-value=5.7e+02 Score=22.80 Aligned_cols=102 Identities=13% Similarity=0.030 Sum_probs=49.2
Q ss_pred HHHHHHHHhhHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHhc--ccCc-----cchHHHHHHHHHHHHHHHHHHHHHh
Q 017343 24 LLITSTGFSSSELARKGINAPTSQSFFNYVLLAIVYGSLMLYRR--QPLK-----AKWYYYLILGLIDVEGNFLVVKAYQ 96 (373)
Q Consensus 24 l~~~~~~~~~~~l~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~--~~~~-----~~~~~~~~~g~~~~~~~~~~~~al~ 96 (373)
++.++.+.+...+.......|-.-..+-.+....+...++..++ +..+ .+-+.++.-+.+.......+..|..
T Consensus 104 ~lyAlinAl~~l~dGGR~v~~~~ai~yt~~s~~~Ca~~~~~~~r~nrr~~s~lIald~kqW~Mst~lS~al~VaF~~a~~ 183 (314)
T COG3965 104 CLYALINALGSLLDGGREVEPGHAIAYTLVSVTGCAAIAWKLRRLNRRLKSPLIALDTKQWLMSTCLSAALFVAFAAAWL 183 (314)
T ss_pred HHHHHHHHHHHHhcCCccccccHHHHHHHHHHHHHHHHHHHHHhhhccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35556666666665433344555555544444444444433333 2222 2223334444444444444443333
Q ss_pred ccchhHHHHhhcchhhHHHHHHHHHhccc
Q 017343 97 YTSLTSVMLLDCWTIPCVMFLTWIFLKTK 125 (373)
Q Consensus 97 ~~~~~~~~~i~~~~p~~~~ll~~~~l~e~ 125 (373)
......+-+..+.-|.+.++...++-.-+
T Consensus 184 l~~T~~a~l~~Y~DPmvlaL~~~v~IplP 212 (314)
T COG3965 184 LAGTKFAHLVVYADPMVLALVCLVFIPLP 212 (314)
T ss_pred hccCchhhhhcccCHHHHHHHHHheeecc
Confidence 33334445555778888887776654433
No 171
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=21.73 E-value=40 Score=24.12 Aligned_cols=24 Identities=17% Similarity=0.133 Sum_probs=19.3
Q ss_pred cccHHHHHHHHHHHHHhheeecCC
Q 017343 278 KVDWLYFIAFAAVAVGLIIYSGGD 301 (373)
Q Consensus 278 ~~~~~~~~G~~li~~g~~l~~~~~ 301 (373)
..++..++|.++++.|..+|..+.
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~ 27 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRF 27 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHH
Confidence 467888999999999998887544
No 172
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=21.59 E-value=5.8e+02 Score=24.65 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHhheeecCCC
Q 017343 282 LYFIAFAAVAVGLIIYSGGDK 302 (373)
Q Consensus 282 ~~~~G~~li~~g~~l~~~~~~ 302 (373)
...+|.++++.|+.+|.+.++
T Consensus 412 ~~~~~~~~~~~g~~~y~~~~~ 432 (468)
T TIGR03810 412 YLLLSAILYAPGIYFYARARK 432 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 567788888999988866433
No 173
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=21.00 E-value=31 Score=26.51 Aligned_cols=28 Identities=7% Similarity=0.131 Sum_probs=16.3
Q ss_pred HHHhcccccHHHH----HHHHHHHHHhheeec
Q 017343 272 IGAYHEKVDWLYF----IAFAAVAVGLIIYSG 299 (373)
Q Consensus 272 ~~~~~e~~~~~~~----~G~~li~~g~~l~~~ 299 (373)
|+|--|.++++.+ +.++++++|+++..+
T Consensus 25 W~fR~ED~tpWNysiL~Ls~vvlvi~~~LLgr 56 (125)
T PF15048_consen 25 WFFRVEDATPWNYSILALSFVVLVISFFLLGR 56 (125)
T ss_pred HheecCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 4445677766643 345566667766654
No 174
>PRK00269 zipA cell division protein ZipA; Reviewed
Probab=20.80 E-value=92 Score=27.97 Aligned_cols=16 Identities=13% Similarity=0.085 Sum_probs=8.4
Q ss_pred HHHHHHHHHhheeecC
Q 017343 285 IAFAAVAVGLIIYSGG 300 (373)
Q Consensus 285 ~G~~li~~g~~l~~~~ 300 (373)
+-.++|++|++.--|+
T Consensus 11 vig~i~i~~il~~~~~ 26 (293)
T PRK00269 11 VIGIIVIAGILFDGWR 26 (293)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3345556666654443
No 175
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=20.53 E-value=78 Score=25.17 Aligned_cols=23 Identities=4% Similarity=-0.091 Sum_probs=12.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHH
Q 017343 252 GATMLNLSLLTSDMWAVLIRIGA 274 (373)
Q Consensus 252 ~a~~~~~~~~~~pv~~~l~~~~~ 274 (373)
+....+.+.|+.|.++++++.++
T Consensus 73 slL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 73 SLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444555566666655554
No 176
>COG1971 Predicted membrane protein [Function unknown]
Probab=20.50 E-value=1.3e+02 Score=25.15 Aligned_cols=45 Identities=11% Similarity=0.123 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcccccHHHHHH-HHHHHHHhheee
Q 017343 254 TMLNLSLLTSDMWAVLIRIGAYHEKVDWLYFIA-FAAVAVGLIIYS 298 (373)
Q Consensus 254 ~~~~~~~~~~pv~~~l~~~~~~~e~~~~~~~~G-~~li~~g~~l~~ 298 (373)
...+..+...|+++...+.++-+-.-.+..|+| .++++.|+.+..
T Consensus 41 ~~fG~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~mI~ 86 (190)
T COG1971 41 LIFGVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKMII 86 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455566688888877776555555667665 456677876653
No 177
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=20.49 E-value=4.9e+02 Score=23.82 Aligned_cols=20 Identities=20% Similarity=0.049 Sum_probs=14.2
Q ss_pred CchhhHHHHHHHHHHHHHHH
Q 017343 160 PRKGDALVIAGATLYAVSNV 179 (373)
Q Consensus 160 ~~~G~~l~l~a~~~~a~~~v 179 (373)
...|+.+.++|.++-+....
T Consensus 130 LF~GV~cf~iAI~lga~ah~ 149 (336)
T PF07168_consen 130 LFPGVACFLIAIILGAAAHK 149 (336)
T ss_pred EEccHHHHHHHHHHHHHHHh
Confidence 34688888888887666544
No 178
>PRK04570 cell division protein ZipA; Provisional
Probab=20.36 E-value=2.8e+02 Score=24.06 Aligned_cols=15 Identities=7% Similarity=0.297 Sum_probs=8.0
Q ss_pred HHHHHHhheeecCCC
Q 017343 288 AAVAVGLIIYSGGDK 302 (373)
Q Consensus 288 ~li~~g~~l~~~~~~ 302 (373)
++.+.++++....++
T Consensus 16 ~~~~~~~~~~~~~~~ 30 (243)
T PRK04570 16 LLLVAAIFLFGRPKK 30 (243)
T ss_pred HHHHHHHHHhcCCCC
Confidence 445556666554443
No 179
>PRK11010 ampG muropeptide transporter; Validated
Probab=20.13 E-value=8.1e+02 Score=23.82 Aligned_cols=20 Identities=25% Similarity=0.398 Sum_probs=10.8
Q ss_pred cHHHHHHHHHHHHHhheeec
Q 017343 280 DWLYFIAFAAVAVGLIIYSG 299 (373)
Q Consensus 280 ~~~~~~G~~li~~g~~l~~~ 299 (373)
.....+..++.+.|+++...
T Consensus 382 ~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 382 PTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33445566666666555543
No 180
>PRK11089 PTS system glucose-specific transporter subunits IIBC; Provisional
Probab=20.02 E-value=8.4e+02 Score=23.94 Aligned_cols=27 Identities=11% Similarity=0.111 Sum_probs=15.9
Q ss_pred ccchHHHHHHHHHHHHHHHH-HHHHHhc
Q 017343 71 KAKWYYYLILGLIDVEGNFL-VVKAYQY 97 (373)
Q Consensus 71 ~~~~~~~~~~g~~~~~~~~~-~~~al~~ 97 (373)
..+|+.+++.|++.+..+++ +.+.+++
T Consensus 351 ~~~~~~~~~vGi~~~~iYy~vF~f~I~k 378 (477)
T PRK11089 351 SSKLWLFPIVGIGYAIVYYTIFRVLIKA 378 (477)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777777777766333 3344444
Done!