BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017346
         (373 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P93824|ACCH6_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 6 OS=Arabidopsis
           thaliana GN=At1g04350 PE=2 SV=1
          Length = 360

 Score = 37.0 bits (84), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 69/154 (44%), Gaps = 23/154 (14%)

Query: 57  RWVYDESYPLYDSSACPNIRKEFDCNECGRPDHLYLKYRWQPDNCDLPRFDAKDFLWRLS 116
           R+VY+ ++ LY SS+C N R  F C     P +        P  C +  F+    + RL 
Sbjct: 128 RFVYNSNFDLYSSSSCVNWRDSFACYMAPDPPNP----EDLPVACRVAMFEYSKHMMRLG 183

Query: 117 GKKIMFIGDSVSL--NQMQS--------LLCLLQTGLPNTNI-IG---QSNDTITTVIFE 162
                 + +++ L  ++++S        LLC      P  ++ IG    S+++  T++ +
Sbjct: 184 DLLFELLSEALGLRSDKLKSMDCMKGLLLLCHYYPPCPQPDLTIGTNNHSDNSFLTILLQ 243

Query: 163 DYDVSVILFHSLYLVDIQ-----VVENVGRVLKL 191
           D    + +FH    VD+      +V N+G  L+L
Sbjct: 244 DQIGGLQIFHQDCWVDVSPIPGALVINMGDFLQL 277


>sp|A4D0V7|CPED1_HUMAN Cadherin-like and PC-esterase domain-containing protein 1 OS=Homo
           sapiens GN=CPED1 PE=2 SV=1
          Length = 1026

 Score = 33.9 bits (76), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 96  WQPDNCDLPRFDAKDFLWRLSGKKIMFIGDSVSLNQMQSLL 136
           WQP NC             L G+KI+FIGDS +   M  L+
Sbjct: 747 WQPHNCQYGVLTKPQLQQCLGGRKILFIGDSTNRGIMYYLI 787


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.137    0.446 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,582,346
Number of Sequences: 539616
Number of extensions: 6695718
Number of successful extensions: 14690
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 14686
Number of HSP's gapped (non-prelim): 9
length of query: 373
length of database: 191,569,459
effective HSP length: 119
effective length of query: 254
effective length of database: 127,355,155
effective search space: 32348209370
effective search space used: 32348209370
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)