Query 017349
Match_columns 373
No_of_seqs 209 out of 2737
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 12:59:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017349.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017349hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 5.2E-44 1.8E-48 318.8 33.3 277 76-369 14-297 (302)
2 1zgk_A Kelch-like ECH-associat 100.0 1.2E-43 4E-48 317.4 32.0 270 71-356 18-295 (308)
3 3ii7_A Kelch-like protein 7; p 100.0 4.1E-43 1.4E-47 313.6 33.0 261 77-356 11-280 (306)
4 4asc_A Kelch repeat and BTB do 100.0 4.6E-42 1.6E-46 308.0 32.9 267 77-361 4-291 (315)
5 2vpj_A Kelch-like protein 12; 100.0 5.4E-42 1.8E-46 305.6 32.9 263 76-356 13-286 (301)
6 2woz_A Kelch repeat and BTB do 100.0 4.8E-41 1.6E-45 301.8 28.9 260 77-354 15-293 (318)
7 2uvk_A YJHT; unknown function, 100.0 2.5E-39 8.5E-44 295.3 26.0 265 75-356 17-350 (357)
8 2xn4_A Kelch-like protein 2; s 100.0 3.1E-39 1.1E-43 287.9 25.0 266 45-325 30-302 (302)
9 4asc_A Kelch repeat and BTB do 100.0 1.2E-39 4E-44 292.4 20.4 270 45-330 13-305 (315)
10 3ii7_A Kelch-like protein 7; p 100.0 7.6E-39 2.6E-43 285.9 23.0 263 44-322 23-294 (306)
11 2woz_A Kelch repeat and BTB do 100.0 3.7E-39 1.3E-43 289.5 20.9 268 47-330 26-315 (318)
12 1zgk_A Kelch-like ECH-associat 100.0 1.7E-38 5.8E-43 283.9 24.0 261 43-320 37-307 (308)
13 2vpj_A Kelch-like protein 12; 100.0 5.3E-38 1.8E-42 279.7 23.5 262 44-322 30-300 (301)
14 2uvk_A YJHT; unknown function, 100.0 1.3E-34 4.4E-39 264.1 27.0 235 106-356 2-302 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 1.5E-34 5.1E-39 284.3 25.3 246 76-334 396-677 (695)
16 1k3i_A Galactose oxidase precu 100.0 7.6E-33 2.6E-37 271.8 19.0 290 47-356 168-505 (656)
17 2zwa_A Leucine carboxyl methyl 100.0 1.7E-31 5.8E-36 262.5 24.3 216 129-358 397-645 (695)
18 1k3i_A Galactose oxidase precu 100.0 2.8E-29 9.6E-34 246.4 17.4 247 94-355 168-448 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1.4E-07 4.7E-12 87.7 25.5 242 23-299 15-311 (445)
20 3v7d_B Cell division control p 99.0 7.3E-08 2.5E-12 90.0 23.4 43 24-66 12-55 (464)
21 1p22_A F-BOX/WD-repeat protein 99.0 3.9E-08 1.3E-12 91.2 20.8 265 24-331 8-354 (435)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 98.8 3.4E-09 1.2E-13 66.9 3.9 45 23-67 5-49 (53)
23 3mbr_X Glutamine cyclotransfer 98.7 4.1E-06 1.4E-10 70.2 20.9 192 119-332 20-225 (243)
24 2e31_A FBS1, F-box only protei 98.6 2E-08 6.8E-13 86.4 3.5 47 24-70 48-95 (297)
25 3dsm_A Uncharacterized protein 98.6 5.5E-05 1.9E-09 67.2 26.1 207 90-330 15-244 (328)
26 3nol_A Glutamine cyclotransfer 98.5 1.8E-05 6.1E-10 67.0 18.4 192 119-332 42-246 (262)
27 3dsm_A Uncharacterized protein 98.4 0.00032 1.1E-08 62.1 26.4 220 75-329 51-285 (328)
28 3nok_A Glutaminyl cyclase; bet 98.3 0.00029 9.9E-09 59.6 21.3 189 119-332 54-256 (268)
29 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0043 1.5E-07 55.7 27.5 232 75-354 51-304 (376)
30 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.0046 1.6E-07 55.5 27.2 224 75-353 101-344 (376)
31 2iwa_A Glutamine cyclotransfer 98.0 0.0019 6.5E-08 55.0 20.9 190 121-333 24-228 (266)
32 1l0q_A Surface layer protein; 97.9 0.0008 2.7E-08 60.7 18.6 188 78-301 2-194 (391)
33 1rwi_B Serine/threonine-protei 97.9 0.0056 1.9E-07 51.9 22.6 214 77-331 34-253 (270)
34 1l0q_A Surface layer protein; 97.9 0.001 3.4E-08 60.0 18.6 189 76-299 42-236 (391)
35 1q7f_A NHL, brain tumor CG1071 97.9 0.0091 3.1E-07 51.1 24.3 223 77-329 40-268 (286)
36 3mbr_X Glutamine cyclotransfer 97.8 0.0025 8.4E-08 53.4 17.8 141 171-329 23-166 (243)
37 3vgz_A Uncharacterized protein 97.8 0.019 6.4E-07 50.6 25.5 222 76-330 51-291 (353)
38 2vdu_B TRNA (guanine-N(7)-)-me 97.6 0.015 5E-07 53.7 22.7 241 76-352 113-397 (450)
39 3bws_A Protein LP49; two-domai 97.6 0.0041 1.4E-07 56.8 17.5 180 93-301 102-297 (433)
40 2z2n_A Virginiamycin B lyase; 97.5 0.034 1.2E-06 47.5 23.4 213 77-329 25-242 (299)
41 3v7d_B Cell division control p 97.5 0.055 1.9E-06 49.7 26.0 172 129-330 279-451 (464)
42 2z2n_A Virginiamycin B lyase; 97.5 0.036 1.2E-06 47.4 23.7 213 77-330 67-284 (299)
43 2hqs_A Protein TOLB; TOLB, PAL 97.5 0.031 1E-06 51.0 22.6 230 92-356 159-395 (415)
44 3nol_A Glutamine cyclotransfer 97.5 0.0031 1.1E-07 53.2 14.2 112 172-300 46-159 (262)
45 4ery_A WD repeat-containing pr 97.5 0.042 1.4E-06 47.5 22.9 176 93-299 46-226 (312)
46 2qc5_A Streptogramin B lactona 97.5 0.041 1.4E-06 47.0 26.0 213 77-330 30-248 (300)
47 1gxr_A ESG1, transducin-like e 97.5 0.018 6.1E-07 50.1 19.7 205 92-331 119-326 (337)
48 1ri6_A Putative isomerase YBHE 97.5 0.018 6.1E-07 50.3 19.7 242 76-354 48-316 (343)
49 2ovr_B FBW7, F-BOX/WD repeat p 97.5 0.031 1E-06 51.3 22.1 193 129-347 248-443 (445)
50 3jrp_A Fusion protein of prote 97.5 0.027 9.1E-07 49.9 21.1 183 124-331 17-229 (379)
51 3jrp_A Fusion protein of prote 97.4 0.013 4.3E-07 52.1 18.9 179 93-297 34-241 (379)
52 3vgz_A Uncharacterized protein 97.4 0.054 1.8E-06 47.5 23.2 220 77-330 100-333 (353)
53 1gxr_A ESG1, transducin-like e 97.4 0.016 5.3E-07 50.5 19.0 208 92-331 72-285 (337)
54 3nok_A Glutaminyl cyclase; bet 97.4 0.0084 2.9E-07 50.7 15.9 138 172-329 58-197 (268)
55 3no2_A Uncharacterized protein 97.4 0.048 1.7E-06 46.7 23.0 236 77-354 4-260 (276)
56 1rwi_B Serine/threonine-protei 97.4 0.014 5E-07 49.2 17.6 174 128-330 33-210 (270)
57 3bws_A Protein LP49; two-domai 97.4 0.027 9.4E-07 51.2 20.4 200 77-300 133-338 (433)
58 3v9f_A Two-component system se 97.3 0.034 1.2E-06 55.3 22.3 203 93-330 428-646 (781)
59 3ow8_A WD repeat-containing pr 97.3 0.021 7.3E-07 50.0 18.6 154 123-300 85-241 (321)
60 1p22_A F-BOX/WD-repeat protein 97.3 0.019 6.4E-07 52.6 18.8 144 129-297 222-366 (435)
61 3g4e_A Regucalcin; six bladed 97.3 0.036 1.2E-06 47.9 19.3 218 77-331 24-262 (297)
62 4g56_B MGC81050 protein; prote 97.3 0.011 3.8E-07 52.7 16.2 207 93-331 116-332 (357)
63 3scy_A Hypothetical bacterial 97.2 0.083 2.8E-06 46.8 21.7 193 91-304 28-250 (361)
64 1k8k_C P40, ARP2/3 complex 41 97.2 0.021 7.1E-07 50.6 17.7 181 92-298 30-235 (372)
65 3u4y_A Uncharacterized protein 97.2 0.059 2E-06 46.9 19.9 191 76-299 8-210 (331)
66 3l2o_B F-box only protein 4; s 97.2 8.7E-05 3E-09 63.2 1.3 44 26-69 4-47 (312)
67 1nir_A Nitrite reductase; hemo 97.2 0.08 2.7E-06 50.2 21.9 271 23-330 87-389 (543)
68 4gqb_B Methylosome protein 50; 97.2 0.012 4.1E-07 52.3 15.2 181 93-301 104-294 (344)
69 4aez_A CDC20, WD repeat-contai 97.2 0.052 1.8E-06 49.0 19.6 179 93-300 114-297 (401)
70 2iwa_A Glutamine cyclotransfer 97.1 0.034 1.2E-06 47.3 16.9 142 172-330 24-169 (266)
71 1r5m_A SIR4-interacting protei 97.1 0.048 1.6E-06 49.1 19.2 152 123-299 154-322 (425)
72 1k8k_C P40, ARP2/3 complex 41 97.1 0.063 2.2E-06 47.4 19.6 186 93-304 75-284 (372)
73 3ow8_A WD repeat-containing pr 97.1 0.069 2.4E-06 46.7 19.4 175 93-299 103-282 (321)
74 1q7f_A NHL, brain tumor CG1071 97.1 0.091 3.1E-06 44.7 19.8 178 128-331 39-226 (286)
75 2aq5_A Coronin-1A; WD40 repeat 97.1 0.046 1.6E-06 49.3 18.5 159 124-303 137-308 (402)
76 4a2l_A BT_4663, two-component 97.0 0.098 3.4E-06 52.0 21.7 203 94-330 429-649 (795)
77 2qc5_A Streptogramin B lactona 97.0 0.13 4.5E-06 43.7 23.1 173 128-330 29-206 (300)
78 3dwl_C Actin-related protein 2 97.0 0.007 2.4E-07 54.1 12.2 211 93-330 34-270 (377)
79 3jro_A Fusion protein of prote 97.0 0.02 6.8E-07 56.7 16.3 179 93-297 32-239 (753)
80 3hfq_A Uncharacterized protein 97.0 0.015 5.2E-07 51.3 14.0 189 91-303 17-227 (347)
81 4aez_A CDC20, WD repeat-contai 96.9 0.11 3.7E-06 46.8 19.8 206 93-331 157-369 (401)
82 2hqs_A Protein TOLB; TOLB, PAL 96.9 0.1 3.6E-06 47.4 19.7 187 92-303 203-394 (415)
83 3lrv_A PRE-mRNA-splicing facto 96.9 0.18 6.2E-06 44.2 22.6 155 178-353 138-299 (343)
84 3v9f_A Two-component system se 96.9 0.35 1.2E-05 47.9 24.9 225 94-355 335-575 (781)
85 3v65_B Low-density lipoprotein 96.9 0.21 7.3E-06 44.9 24.4 203 92-330 96-306 (386)
86 1vyh_C Platelet-activating fac 96.9 0.16 5.3E-06 46.1 20.6 134 93-256 131-268 (410)
87 2p4o_A Hypothetical protein; p 96.9 0.18 6.2E-06 43.6 24.4 220 77-331 42-278 (306)
88 3jro_A Fusion protein of prote 96.9 0.026 9.1E-07 55.8 16.1 178 128-331 19-227 (753)
89 2ojh_A Uncharacterized protein 96.9 0.12 4.2E-06 43.5 18.6 188 90-303 20-213 (297)
90 4ery_A WD repeat-containing pr 96.9 0.084 2.9E-06 45.6 17.6 152 125-300 30-184 (312)
91 4gga_A P55CDC, cell division c 96.9 0.17 5.7E-06 46.0 20.3 183 92-301 125-315 (420)
92 2ast_B S-phase kinase-associat 96.8 0.00042 1.4E-08 61.4 2.6 44 23-66 5-48 (336)
93 3hfq_A Uncharacterized protein 96.8 0.032 1.1E-06 49.2 14.8 145 147-303 18-179 (347)
94 3u4y_A Uncharacterized protein 96.8 0.2 6.8E-06 43.4 19.8 198 76-303 50-259 (331)
95 3vl1_A 26S proteasome regulato 96.8 0.26 8.7E-06 44.4 21.1 175 93-298 79-280 (420)
96 4a2l_A BT_4663, two-component 96.8 0.46 1.6E-05 47.2 24.5 204 94-330 379-604 (795)
97 3scy_A Hypothetical bacterial 96.8 0.25 8.5E-06 43.6 20.9 246 76-354 60-345 (361)
98 1pjx_A Dfpase, DIISOPROPYLFLUO 96.8 0.17 5.8E-06 43.5 19.0 212 92-331 46-288 (314)
99 3azo_A Aminopeptidase; POP fam 96.7 0.39 1.3E-05 46.3 22.8 247 91-354 101-375 (662)
100 2xdw_A Prolyl endopeptidase; a 96.7 0.48 1.6E-05 46.3 23.3 213 77-302 136-375 (710)
101 3zwl_B Eukaryotic translation 96.7 0.27 9.3E-06 43.0 19.9 184 93-301 55-254 (369)
102 1qks_A Cytochrome CD1 nitrite 96.7 0.28 9.4E-06 46.7 20.7 247 23-300 105-377 (567)
103 3no2_A Uncharacterized protein 96.7 0.14 4.7E-06 43.8 17.1 189 129-354 4-203 (276)
104 3mkq_A Coatomer beta'-subunit; 96.7 0.15 5.1E-06 50.5 19.8 177 92-298 35-219 (814)
105 1nir_A Nitrite reductase; hemo 96.6 0.2 6.8E-06 47.5 19.4 202 76-308 189-419 (543)
106 2dg1_A DRP35, lactonase; beta 96.6 0.31 1E-05 42.4 19.9 203 77-302 55-269 (333)
107 3ei3_B DNA damage-binding prot 96.6 0.14 4.9E-06 45.5 17.6 144 131-296 87-236 (383)
108 3zwl_B Eukaryotic translation 96.6 0.099 3.4E-06 45.9 16.3 181 93-298 97-306 (369)
109 2pm7_B Protein transport prote 96.6 0.31 1.1E-05 41.8 19.4 111 124-254 15-133 (297)
110 3v64_C Agrin; beta propeller, 96.5 0.38 1.3E-05 42.6 25.9 204 92-331 53-264 (349)
111 3fm0_A Protein CIAO1; WDR39,SG 96.5 0.046 1.6E-06 48.3 13.4 157 125-303 23-188 (345)
112 2pm7_B Protein transport prote 96.5 0.35 1.2E-05 41.4 21.5 193 130-354 67-292 (297)
113 1ri6_A Putative isomerase YBHE 96.5 0.37 1.3E-05 41.7 22.5 194 78-300 5-215 (343)
114 3ott_A Two-component system se 96.5 0.32 1.1E-05 48.1 20.6 183 94-303 394-593 (758)
115 3fvz_A Peptidyl-glycine alpha- 96.5 0.39 1.3E-05 41.9 27.7 214 92-331 69-311 (329)
116 2ojh_A Uncharacterized protein 96.5 0.17 5.7E-06 42.7 16.5 188 93-303 63-265 (297)
117 2ghs_A AGR_C_1268P; regucalcin 96.4 0.42 1.4E-05 41.7 19.4 216 77-331 60-292 (326)
118 2bkl_A Prolyl endopeptidase; m 96.4 0.54 1.8E-05 45.9 21.6 201 88-302 143-357 (695)
119 3m0c_C LDL receptor, low-densi 96.4 0.89 3.1E-05 45.0 23.8 203 93-331 405-621 (791)
120 3azo_A Aminopeptidase; POP fam 96.4 0.5 1.7E-05 45.6 21.0 194 91-304 160-377 (662)
121 1got_B GT-beta; complex (GTP-b 96.3 0.49 1.7E-05 41.4 21.9 176 93-298 78-259 (340)
122 2dg1_A DRP35, lactonase; beta 96.3 0.13 4.4E-06 44.9 15.1 156 128-296 54-213 (333)
123 2hes_X YDR267CP; beta-propelle 96.3 0.39 1.3E-05 41.9 18.2 179 93-295 35-229 (330)
124 3bg1_A Protein SEC13 homolog; 96.3 0.16 5.5E-06 44.1 15.5 194 130-356 71-302 (316)
125 3dwl_C Actin-related protein 2 96.3 0.094 3.2E-06 46.5 14.3 187 93-306 78-291 (377)
126 1got_B GT-beta; complex (GTP-b 96.3 0.52 1.8E-05 41.2 19.2 151 126-299 63-218 (340)
127 3mkq_A Coatomer beta'-subunit; 96.3 0.25 8.7E-06 48.9 18.6 150 124-298 19-174 (814)
128 3e5z_A Putative gluconolactona 96.2 0.47 1.6E-05 40.4 19.6 157 123-299 33-206 (296)
129 1vyh_C Platelet-activating fac 96.2 0.25 8.5E-06 44.7 17.1 153 123-300 113-269 (410)
130 1npe_A Nidogen, entactin; glyc 96.2 0.44 1.5E-05 40.0 21.5 207 93-331 11-227 (267)
131 3fm0_A Protein CIAO1; WDR39,SG 96.2 0.13 4.3E-06 45.4 14.7 177 93-294 39-223 (345)
132 1r5m_A SIR4-interacting protei 96.2 0.62 2.1E-05 41.5 23.4 156 121-299 111-281 (425)
133 2z3z_A Dipeptidyl aminopeptida 96.2 0.77 2.6E-05 44.6 21.5 150 146-303 234-398 (706)
134 2aq5_A Coronin-1A; WD40 repeat 96.2 0.65 2.2E-05 41.6 21.1 150 129-298 93-256 (402)
135 2bkl_A Prolyl endopeptidase; m 96.2 1 3.5E-05 43.9 24.1 244 76-330 78-337 (695)
136 1sq9_A Antiviral protein SKI8; 96.2 0.34 1.2E-05 43.1 17.6 145 131-298 82-269 (397)
137 3ei3_B DNA damage-binding prot 96.2 0.38 1.3E-05 42.7 17.9 184 79-297 87-283 (383)
138 2pm9_A Protein WEB1, protein t 96.2 0.67 2.3E-05 41.4 20.2 182 91-297 44-250 (416)
139 2hes_X YDR267CP; beta-propelle 96.1 0.36 1.2E-05 42.1 17.2 160 123-303 112-287 (330)
140 3p5b_L Low density lipoprotein 96.1 0.79 2.7E-05 41.4 25.2 205 92-330 92-308 (400)
141 1ijq_A LDL receptor, low-densi 96.0 0.68 2.3E-05 40.2 25.9 202 92-330 10-226 (316)
142 1sq9_A Antiviral protein SKI8; 96.0 0.78 2.7E-05 40.7 19.2 108 178-298 197-324 (397)
143 3iz6_a 40S ribosomal protein R 96.0 0.8 2.7E-05 40.8 19.4 182 93-297 181-376 (380)
144 1pgu_A Actin interacting prote 96.0 0.33 1.1E-05 46.1 17.3 157 121-300 119-287 (615)
145 4g56_B MGC81050 protein; prote 96.0 0.24 8.1E-06 43.9 15.3 172 93-296 162-343 (357)
146 4ggc_A P55CDC, cell division c 96.0 0.66 2.2E-05 39.6 19.8 208 93-331 46-261 (318)
147 2pm9_A Protein WEB1, protein t 96.0 0.84 2.9E-05 40.7 19.9 149 130-298 126-296 (416)
148 2z3z_A Dipeptidyl aminopeptida 95.9 0.34 1.2E-05 47.2 17.5 108 195-303 234-351 (706)
149 4e54_B DNA damage-binding prot 95.9 0.24 8.1E-06 45.2 15.5 189 78-297 132-328 (435)
150 2fp8_A Strictosidine synthase; 95.9 0.73 2.5E-05 39.9 19.4 219 91-330 39-301 (322)
151 3vl1_A 26S proteasome regulato 95.9 0.89 3.1E-05 40.7 27.0 205 93-331 120-354 (420)
152 2xbg_A YCF48-like protein; pho 95.9 0.81 2.8E-05 40.0 22.8 215 100-357 23-244 (327)
153 3v65_B Low-density lipoprotein 95.9 0.94 3.2E-05 40.6 23.1 176 92-298 138-320 (386)
154 1erj_A Transcriptional repress 95.9 0.93 3.2E-05 40.5 19.9 177 93-298 146-343 (393)
155 3c5m_A Oligogalacturonate lyas 95.9 0.61 2.1E-05 41.3 17.6 197 91-303 167-391 (396)
156 3lrv_A PRE-mRNA-splicing facto 95.8 0.85 2.9E-05 39.8 20.1 179 129-329 138-330 (343)
157 2pbi_B Guanine nucleotide-bind 95.8 0.9 3.1E-05 40.0 18.5 134 148-298 177-317 (354)
158 3fvz_A Peptidyl-glycine alpha- 95.8 0.85 2.9E-05 39.7 21.7 169 147-331 69-259 (329)
159 3k26_A Polycomb protein EED; W 95.8 0.28 9.5E-06 42.9 15.0 190 78-298 85-320 (366)
160 1yfq_A Cell cycle arrest prote 95.8 0.82 2.8E-05 39.5 19.3 206 93-332 80-313 (342)
161 3sfz_A APAF-1, apoptotic pepti 95.8 0.39 1.3E-05 50.2 18.2 178 93-299 984-1161(1249)
162 2p1m_B Transport inhibitor res 95.8 0.0032 1.1E-07 60.4 2.3 37 24-60 3-40 (594)
163 1pjx_A Dfpase, DIISOPROPYLFLUO 95.8 0.79 2.7E-05 39.2 18.9 191 78-297 83-300 (314)
164 3bg1_A Protein SEC13 homolog; 95.8 0.31 1.1E-05 42.2 15.0 115 180-308 180-306 (316)
165 1yr2_A Prolyl oligopeptidase; 95.8 1.7 5.7E-05 42.8 22.4 198 90-302 187-401 (741)
166 3mmy_A MRNA export factor; mRN 95.7 0.91 3.1E-05 39.5 18.5 202 93-331 109-335 (368)
167 4e54_B DNA damage-binding prot 95.7 0.16 5.5E-06 46.3 13.4 146 129-298 131-284 (435)
168 2pbi_B Guanine nucleotide-bind 95.7 0.52 1.8E-05 41.6 16.3 155 126-301 72-234 (354)
169 4gga_A P55CDC, cell division c 95.7 0.53 1.8E-05 42.6 16.7 134 148-297 126-262 (420)
170 3i2n_A WD repeat-containing pr 95.7 0.49 1.7E-05 41.2 16.0 190 77-297 30-244 (357)
171 2ecf_A Dipeptidyl peptidase IV 95.6 1.3 4.6E-05 43.2 20.4 104 197-303 264-375 (741)
172 2ynn_A Coatomer subunit beta'; 95.6 0.98 3.3E-05 38.7 18.9 175 93-298 36-219 (304)
173 1npe_A Nidogen, entactin; glyc 95.6 0.88 3E-05 38.1 25.0 191 77-300 47-242 (267)
174 3k26_A Polycomb protein EED; W 95.6 0.48 1.6E-05 41.4 15.5 104 130-255 85-194 (366)
175 2ad6_A Methanol dehydrogenase 95.6 1.7 5.8E-05 41.3 21.9 115 129-259 62-193 (571)
176 1qhu_A Protein (hemopexin); be 95.5 0.51 1.8E-05 43.3 15.6 171 129-331 158-376 (460)
177 3m0c_C LDL receptor, low-densi 95.5 2.2 7.6E-05 42.3 23.3 152 121-297 474-633 (791)
178 3e5z_A Putative gluconolactona 95.4 1.1 3.6E-05 38.2 19.6 195 77-303 39-253 (296)
179 4a0p_A LRP6, LRP-6, low-densit 95.4 2 6.8E-05 41.4 25.1 202 91-330 14-225 (628)
180 4a11_B DNA excision repair pro 95.4 0.42 1.4E-05 42.5 14.9 152 123-297 48-219 (408)
181 2ad6_A Methanol dehydrogenase 95.4 0.88 3E-05 43.3 17.6 116 173-302 57-193 (571)
182 4a11_B DNA excision repair pro 95.4 0.49 1.7E-05 42.0 15.3 147 129-298 111-278 (408)
183 1jmx_B Amine dehydrogenase; ox 95.4 0.35 1.2E-05 42.0 14.0 155 129-301 10-180 (349)
184 2ynn_A Coatomer subunit beta'; 95.4 1.1 3.9E-05 38.3 17.6 148 125-297 20-173 (304)
185 1n7d_A LDL receptor, low-densi 95.4 0.51 1.7E-05 46.2 16.1 204 93-330 387-602 (699)
186 3sfz_A APAF-1, apoptotic pepti 95.3 0.24 8.3E-06 51.8 14.7 174 93-299 1026-1210(1249)
187 1pgu_A Actin interacting prote 95.3 2 6.7E-05 40.6 22.4 181 93-301 40-243 (615)
188 3i2n_A WD repeat-containing pr 95.3 0.82 2.8E-05 39.7 16.2 151 130-300 31-203 (357)
189 2ecf_A Dipeptidyl peptidase IV 95.3 1.5 5E-05 42.9 19.5 119 76-212 47-188 (741)
190 1w6s_A Methanol dehydrogenase 95.3 2.1 7.2E-05 40.9 20.1 115 129-259 62-199 (599)
191 1kb0_A Quinohemoprotein alcoho 95.3 2.4 8.1E-05 41.3 23.0 120 75-211 75-207 (677)
192 1qhu_A Protein (hemopexin); be 95.3 1.8 6.1E-05 39.7 18.5 127 178-331 158-322 (460)
193 1kb0_A Quinohemoprotein alcoho 95.3 0.84 2.9E-05 44.4 17.2 114 174-302 73-207 (677)
194 4gqb_B Methylosome protein 50; 95.2 0.72 2.4E-05 40.6 15.4 143 129-297 181-332 (344)
195 2vdu_B TRNA (guanine-N(7)-)-me 95.2 1.8 6.1E-05 39.4 18.9 156 123-300 107-275 (450)
196 3odt_A Protein DOA1; ubiquitin 95.2 1.3 4.4E-05 37.6 20.2 175 93-298 40-216 (313)
197 3hxj_A Pyrrolo-quinoline quino 95.1 1.2 4.2E-05 38.2 16.6 198 77-330 107-313 (330)
198 2fp8_A Strictosidine synthase; 95.1 0.89 3E-05 39.4 15.5 199 77-297 91-314 (322)
199 1ijq_A LDL receptor, low-densi 95.1 1.5 5.2E-05 38.0 23.4 186 77-298 41-240 (316)
200 1yfq_A Cell cycle arrest prote 95.1 1.1 3.6E-05 38.7 16.1 145 129-296 67-225 (342)
201 3g4e_A Regucalcin; six bladed 95.1 0.87 3E-05 38.9 15.2 174 129-329 24-216 (297)
202 3pe7_A Oligogalacturonate lyas 95.1 1.6 5.6E-05 38.5 17.6 154 146-304 167-337 (388)
203 1pby_B Quinohemoprotein amine 95.0 0.83 2.8E-05 39.3 15.0 118 76-209 44-167 (337)
204 3odt_A Protein DOA1; ubiquitin 95.0 1.5 5E-05 37.2 20.2 106 178-301 154-260 (313)
205 1n7d_A LDL receptor, low-densi 94.9 0.86 3E-05 44.5 16.3 154 122-300 457-618 (699)
206 1pex_A Collagenase-3, MMP-13; 94.9 1.2 4.2E-05 36.0 18.3 140 129-300 33-196 (207)
207 3v64_C Agrin; beta propeller, 94.9 1.9 6.3E-05 38.1 25.0 187 77-298 84-277 (349)
208 3pe7_A Oligogalacturonate lyas 94.9 0.65 2.2E-05 41.1 14.4 197 92-299 168-387 (388)
209 3iz6_a 40S ribosomal protein R 94.9 1.7 5.7E-05 38.6 17.1 166 148-331 181-364 (380)
210 2ymu_A WD-40 repeat protein; u 94.9 2.6 8.9E-05 39.5 19.4 177 123-331 349-528 (577)
211 3ju4_A Endo-N-acetylneuraminid 94.7 1.3 4.3E-05 39.4 14.6 122 162-285 277-407 (670)
212 3c5m_A Oligogalacturonate lyas 94.7 1.2 4.2E-05 39.3 15.6 149 146-304 167-337 (396)
213 4aow_A Guanine nucleotide-bind 94.7 1.9 6.4E-05 37.0 20.9 155 122-298 90-248 (340)
214 3iuj_A Prolyl endopeptidase; h 94.6 3.6 0.00012 40.0 20.9 198 90-303 153-366 (693)
215 3oyo_A Hemopexin fold protein 94.6 1.1 3.7E-05 36.9 13.7 140 128-296 12-198 (225)
216 1erj_A Transcriptional repress 94.6 0.55 1.9E-05 42.1 13.2 151 123-297 128-288 (393)
217 2ymu_A WD-40 repeat protein; u 94.6 1.8 6.2E-05 40.6 17.3 177 123-331 390-569 (577)
218 1kv9_A Type II quinohemoprotei 94.6 3.6 0.00012 39.9 22.3 118 76-210 65-194 (668)
219 2xyi_A Probable histone-bindin 94.5 2.2 7.6E-05 38.5 17.2 101 181-296 196-309 (430)
220 2xbg_A YCF48-like protein; pho 94.4 2.3 7.9E-05 37.0 23.8 213 77-330 89-311 (327)
221 3dm0_A Maltose-binding peripla 94.4 4 0.00014 39.5 22.2 155 122-298 434-594 (694)
222 4h5i_A Guanine nucleotide-exch 94.3 2.6 8.8E-05 37.2 18.9 181 92-297 157-344 (365)
223 3hrp_A Uncharacterized protein 94.2 3 0.0001 37.6 23.6 224 77-331 141-399 (409)
224 2xdw_A Prolyl endopeptidase; a 94.2 4.4 0.00015 39.4 25.5 245 76-330 82-354 (710)
225 1yiq_A Quinohemoprotein alcoho 94.1 4.6 0.00016 39.3 19.8 114 174-302 66-200 (689)
226 3p5b_L Low density lipoprotein 94.1 3.2 0.00011 37.3 24.6 152 121-297 162-321 (400)
227 3sov_A LRP-6, low-density lipo 94.0 2.8 9.4E-05 36.4 23.6 201 91-330 12-226 (318)
228 1qks_A Cytochrome CD1 nitrite 94.0 4.3 0.00015 38.5 20.4 203 76-308 207-438 (567)
229 4h5i_A Guanine nucleotide-exch 93.9 3.2 0.00011 36.6 18.2 207 123-354 138-355 (365)
230 1w6s_A Methanol dehydrogenase 93.9 2.3 8E-05 40.6 16.4 116 173-302 57-199 (599)
231 3ogk_B Coronatine-insensitive 93.9 0.021 7.1E-07 54.7 2.1 35 26-60 12-47 (592)
232 1kv9_A Type II quinohemoprotei 93.8 0.73 2.5E-05 44.8 13.0 115 173-302 61-195 (668)
233 2hz6_A Endoplasmic reticulum t 93.8 0.16 5.4E-06 45.4 7.7 139 129-301 9-156 (369)
234 3frx_A Guanine nucleotide-bind 93.6 3.2 0.00011 35.7 17.6 152 122-298 69-229 (319)
235 3ott_A Two-component system se 93.6 6.1 0.00021 38.8 20.5 147 127-303 71-227 (758)
236 3sov_A LRP-6, low-density lipo 93.5 3.4 0.00012 35.8 24.3 185 77-299 46-241 (318)
237 2ghs_A AGR_C_1268P; regucalcin 93.5 3 0.0001 36.1 15.4 143 129-295 60-209 (326)
238 3dr2_A Exported gluconolactona 93.5 3.3 0.00011 35.4 20.0 200 77-303 56-274 (305)
239 3lp9_A LS-24; SEED albumin, pl 93.3 2 6.7E-05 35.3 12.9 141 128-297 14-202 (227)
240 1itv_A MMP9; adaptive molecula 93.2 2.7 9.1E-05 33.6 17.1 137 129-300 16-178 (195)
241 3hrp_A Uncharacterized protein 93.2 4.7 0.00016 36.3 20.2 187 121-330 134-341 (409)
242 1flg_A Protein (quinoprotein e 93.1 3.5 0.00012 39.2 16.2 114 173-301 63-200 (582)
243 1yiq_A Quinohemoprotein alcoho 93.1 6.9 0.00024 38.1 24.5 118 76-210 69-199 (689)
244 2xyi_A Probable histone-bindin 93.0 1.7 5.9E-05 39.3 13.4 141 132-296 196-353 (430)
245 2p4o_A Hypothetical protein; p 92.8 4.1 0.00014 34.8 18.1 146 129-296 42-198 (306)
246 3mmy_A MRNA export factor; mRN 92.8 4.3 0.00015 35.0 17.1 105 179-298 54-162 (368)
247 3f3f_A Nucleoporin SEH1; struc 92.8 4 0.00014 34.7 18.8 63 179-254 182-250 (351)
248 4ggc_A P55CDC, cell division c 92.8 3.9 0.00013 34.6 14.9 135 148-298 46-183 (318)
249 4aow_A Guanine nucleotide-bind 92.6 4.4 0.00015 34.6 19.0 104 179-299 185-289 (340)
250 3o4h_A Acylamino-acid-releasin 92.5 7 0.00024 36.8 18.1 132 149-294 134-274 (582)
251 3gre_A Serine/threonine-protei 92.5 4.5 0.00015 36.3 15.5 149 129-298 181-361 (437)
252 3c7x_A Matrix metalloproteinas 92.4 3.5 0.00012 32.9 14.1 134 129-298 15-177 (196)
253 2xzm_R RACK1; ribosome, transl 92.3 5.1 0.00018 34.7 19.0 62 227-298 224-287 (343)
254 1nr0_A Actin interacting prote 92.3 7.9 0.00027 36.8 22.8 159 122-301 194-360 (611)
255 3hxj_A Pyrrolo-quinoline quino 92.3 4.8 0.00017 34.3 15.1 138 129-301 107-250 (330)
256 1itv_A MMP9; adaptive molecula 92.1 3.5 0.00012 32.9 12.5 132 173-331 11-165 (195)
257 3o4h_A Acylamino-acid-releasin 92.0 1.5 5E-05 41.6 11.9 176 95-302 135-320 (582)
258 2hz6_A Endoplasmic reticulum t 91.9 0.19 6.6E-06 44.9 5.4 106 175-301 6-118 (369)
259 1su3_A Interstitial collagenas 91.8 7.7 0.00026 35.5 16.8 138 129-301 272-437 (450)
260 3b7f_A Glycosyl hydrolase, BNR 91.7 6.9 0.00024 34.8 20.4 188 148-356 32-270 (394)
261 3ba0_A Macrophage metalloelast 91.6 7 0.00024 34.6 16.6 138 129-301 190-355 (365)
262 3tc9_A Hypothetical hydrolase; 91.5 7.9 0.00027 35.1 21.7 224 77-330 149-418 (430)
263 3b7f_A Glycosyl hydrolase, BNR 91.5 7.3 0.00025 34.7 22.8 233 94-356 33-330 (394)
264 3dr2_A Exported gluconolactona 91.5 6 0.0002 33.7 15.0 128 146-294 168-304 (305)
265 1pby_B Quinohemoprotein amine 91.1 2.8 9.6E-05 35.8 12.0 141 148-300 12-167 (337)
266 1jmx_B Amine dehydrogenase; ox 91.0 1.2 4E-05 38.5 9.5 67 178-257 10-78 (349)
267 3dm0_A Maltose-binding peripla 90.9 11 0.00036 36.5 17.2 151 124-300 478-636 (694)
268 1nr0_A Actin interacting prote 90.7 12 0.00039 35.7 20.6 145 131-298 161-315 (611)
269 1hxn_A Hemopexin, HPX; heme, b 90.2 6.5 0.00022 32.0 13.9 140 121-296 20-197 (219)
270 1pex_A Collagenase-3, MMP-13; 89.8 6.8 0.00023 31.5 15.1 133 173-331 28-183 (207)
271 2gop_A Trilobed protease; beta 89.8 9 0.00031 32.9 18.5 201 76-302 69-297 (347)
272 3sre_A PON1, serum paraoxonase 89.6 10 0.00035 33.4 17.8 191 91-295 82-297 (355)
273 4hw6_A Hypothetical protein, I 89.6 12 0.0004 34.0 21.1 223 77-330 152-421 (433)
274 1yr2_A Prolyl oligopeptidase; 89.5 17 0.00057 35.5 24.9 240 77-330 118-381 (741)
275 2qe8_A Uncharacterized protein 89.3 10 0.00035 32.9 19.5 54 274-332 257-311 (343)
276 2ece_A 462AA long hypothetical 89.2 13 0.00044 34.0 20.7 218 73-304 21-297 (462)
277 3c75_H MADH, methylamine dehyd 89.2 13 0.00043 33.8 17.3 119 76-208 83-212 (426)
278 3s94_A LRP-6, low-density lipo 89.2 16 0.00054 35.0 21.4 181 119-330 350-539 (619)
279 2xzm_R RACK1; ribosome, transl 89.1 10 0.00036 32.7 20.2 149 124-295 82-243 (343)
280 3frx_A Guanine nucleotide-bind 88.9 10 0.00035 32.4 19.2 173 92-297 87-268 (319)
281 1hxn_A Hemopexin, HPX; heme, b 88.5 8.9 0.0003 31.2 12.9 128 177-331 27-188 (219)
282 3f3f_A Nucleoporin SEH1; struc 88.4 11 0.00036 31.9 18.4 113 123-255 16-145 (351)
283 1k32_A Tricorn protease; prote 87.9 5.9 0.0002 40.6 13.2 100 196-303 358-468 (1045)
284 1xfd_A DIP, dipeptidyl aminope 87.8 20 0.00069 34.5 17.0 62 196-259 228-295 (723)
285 1flg_A Protein (quinoprotein e 87.4 5.8 0.0002 37.7 12.0 72 222-302 63-144 (582)
286 4a0p_A LRP6, LRP-6, low-densit 87.3 21 0.00072 34.2 23.3 184 76-297 47-238 (628)
287 3gre_A Serine/threonine-protei 86.5 17 0.00059 32.3 21.3 150 78-255 182-361 (437)
288 3tc9_A Hypothetical hydrolase; 86.4 6.9 0.00024 35.5 11.5 143 129-295 149-300 (430)
289 3oyo_A Hemopexin fold protein 85.8 13 0.00045 30.3 14.1 107 121-253 62-198 (225)
290 3s94_A LRP-6, low-density lipo 85.7 26 0.00088 33.5 22.9 206 91-330 17-231 (619)
291 1gen_A Gelatinase A; hydrolase 84.7 14 0.00049 29.9 15.9 138 129-298 40-204 (218)
292 1jof_A Carboxy-CIS,CIS-muconat 84.0 21 0.00071 31.1 15.6 168 121-303 148-348 (365)
293 3lp9_A LS-24; SEED albumin, pl 83.9 5.7 0.00019 32.6 8.7 101 128-254 71-202 (227)
294 1k32_A Tricorn protease; prote 83.8 41 0.0014 34.3 22.0 98 197-303 318-416 (1045)
295 3iuj_A Prolyl endopeptidase; h 83.0 35 0.0012 33.0 27.7 263 77-357 88-368 (693)
296 2gop_A Trilobed protease; beta 82.4 22 0.00076 30.3 16.4 184 91-303 42-258 (347)
297 3vu4_A KMHSV2; beta-propeller 82.4 24 0.00081 30.6 25.7 64 227-297 206-272 (355)
298 1su3_A Interstitial collagenas 81.9 30 0.001 31.5 13.6 129 173-331 267-423 (450)
299 2p9w_A MAL S 1 allergenic prot 81.6 26 0.00088 30.5 13.1 139 125-284 143-304 (334)
300 2xe4_A Oligopeptidase B; hydro 80.9 44 0.0015 32.7 22.8 140 147-294 247-398 (751)
301 1jof_A Carboxy-CIS,CIS-muconat 79.7 18 0.00063 31.5 11.3 145 149-303 18-184 (365)
302 3c75_H MADH, methylamine dehyd 79.5 36 0.0012 30.8 15.2 71 227-300 330-406 (426)
303 4hw6_A Hypothetical protein, I 79.1 23 0.0008 32.0 12.0 151 121-295 142-303 (433)
304 3vu4_A KMHSV2; beta-propeller 78.6 32 0.0011 29.7 20.3 170 129-331 70-260 (355)
305 3c7x_A Matrix metalloproteinas 77.8 24 0.00083 27.9 13.3 108 121-255 53-177 (196)
306 1ck7_A Protein (gelatinase A); 77.8 19 0.00066 34.3 11.1 135 129-298 453-617 (631)
307 2p9w_A MAL S 1 allergenic prot 77.4 35 0.0012 29.6 24.8 237 77-333 24-306 (334)
308 1xfd_A DIP, dipeptidyl aminope 76.2 45 0.0015 32.0 13.9 108 93-211 38-149 (723)
309 2cn3_A Xyloglucanase, beta-1,4 75.5 63 0.0022 31.5 19.0 178 94-303 504-694 (737)
310 4a5s_A Dipeptidyl peptidase 4 73.8 68 0.0023 31.1 19.0 142 196-345 228-399 (740)
311 3ba0_A Macrophage metalloelast 72.5 50 0.0017 29.1 12.9 105 128-258 235-355 (365)
312 3dw8_B Serine/threonine-protei 72.0 52 0.0018 29.0 15.2 65 227-299 188-261 (447)
313 3dw8_B Serine/threonine-protei 71.2 54 0.0019 28.9 15.1 28 275-303 353-380 (447)
314 1fwx_A Nitrous oxide reductase 71.0 42 0.0014 31.8 11.4 212 77-307 101-380 (595)
315 2ece_A 462AA long hypothetical 71.0 62 0.0021 29.5 16.9 70 178-255 95-175 (462)
316 2mad_H Methylamine dehydrogena 70.4 56 0.0019 28.7 23.2 72 227-300 278-354 (373)
317 2oit_A Nucleoporin 214KDA; NH2 69.4 64 0.0022 29.0 16.7 59 179-252 162-222 (434)
318 1gen_A Gelatinase A; hydrolase 67.9 47 0.0016 26.8 15.5 132 173-331 35-193 (218)
319 2oaj_A Protein SNI1; WD40 repe 66.0 1.1E+02 0.0039 30.6 17.9 149 125-300 24-186 (902)
320 1mda_H Methylamine dehydrogena 65.4 72 0.0025 28.1 13.6 193 77-297 31-241 (368)
321 2j04_A TAU60, YPL007P, hypothe 63.7 1E+02 0.0034 29.2 19.1 180 121-331 88-287 (588)
322 2j04_A TAU60, YPL007P, hypothe 63.4 1E+02 0.0035 29.1 17.2 113 121-258 132-259 (588)
323 4hvt_A Ritya.17583.B, post-pro 62.9 1.2E+02 0.004 29.6 14.7 150 147-305 269-438 (711)
324 3ei3_A DNA damage-binding prot 60.2 1.6E+02 0.0056 30.5 18.5 116 195-322 863-979 (1158)
325 3kya_A Putative phosphatase; s 59.6 1.1E+02 0.0037 28.2 11.8 155 121-294 142-339 (496)
326 2xe4_A Oligopeptidase B; hydro 58.8 1.4E+02 0.0047 29.1 20.3 149 146-304 294-466 (751)
327 2oiz_A Aromatic amine dehydrog 56.9 97 0.0033 26.8 20.1 119 77-208 15-143 (361)
328 1ck7_A Protein (gelatinase A); 56.6 79 0.0027 30.2 10.4 133 173-331 448-606 (631)
329 4hvt_A Ritya.17583.B, post-pro 56.1 1.5E+02 0.0052 28.8 19.9 104 195-301 268-386 (711)
330 1z68_A Fibroblast activation p 55.3 1.5E+02 0.005 28.4 18.2 106 196-303 224-353 (719)
331 3kya_A Putative phosphatase; s 54.0 1.4E+02 0.0046 27.6 20.1 240 77-339 151-471 (496)
332 2be1_A Serine/threonine-protei 53.7 36 0.0012 29.7 7.2 56 244-300 20-80 (339)
333 2oaj_A Protein SNI1; WD40 repe 52.7 1.9E+02 0.0065 28.9 19.1 136 148-300 80-246 (902)
334 3qhy_B Beta-lactamase inhibito 50.4 1.1E+02 0.0038 25.5 10.3 18 171-188 73-90 (282)
335 3sjl_D Methylamine dehydrogena 48.5 1.5E+02 0.005 26.3 19.8 121 75-208 42-172 (386)
336 3sjl_D Methylamine dehydrogena 48.4 1.5E+02 0.005 26.3 17.8 72 227-300 291-367 (386)
337 4gq1_A NUP37; propeller, trans 48.0 1.4E+02 0.0048 26.0 11.8 26 275-300 327-352 (393)
338 3qqz_A Putative uncharacterize 46.8 1.2E+02 0.0042 25.0 10.2 124 209-339 20-149 (255)
339 3ju4_A Endo-N-acetylneuraminid 46.0 1.7E+02 0.0057 26.3 12.7 123 204-330 268-405 (670)
340 4gq1_A NUP37; propeller, trans 45.3 97 0.0033 27.0 9.0 63 227-298 155-220 (393)
341 3qhy_B Beta-lactamase inhibito 44.5 1.4E+02 0.0047 24.9 11.1 18 171-188 34-51 (282)
342 2mad_H Methylamine dehydrogena 43.3 1.7E+02 0.0057 25.5 26.5 118 76-208 31-159 (373)
343 2be1_A Serine/threonine-protei 42.7 61 0.0021 28.2 6.9 97 148-259 21-138 (339)
344 3ei3_A DNA damage-binding prot 41.2 3.2E+02 0.011 28.3 17.5 133 145-295 862-1000(1158)
345 1fwx_A Nitrous oxide reductase 40.9 2.4E+02 0.0082 26.7 12.0 158 129-297 101-309 (595)
346 2cn3_A Xyloglucanase, beta-1,4 34.5 3.3E+02 0.011 26.4 28.2 258 77-354 35-343 (737)
347 2oit_A Nucleoporin 214KDA; NH2 32.3 2.7E+02 0.0092 24.7 14.1 156 130-301 162-340 (434)
348 4a5s_A Dipeptidyl peptidase 4 30.1 3.8E+02 0.013 25.7 17.5 72 92-164 36-109 (740)
349 3sre_A PON1, serum paraoxonase 27.7 3E+02 0.01 23.9 20.0 189 129-329 60-284 (355)
350 2l9b_B MRNA 3'-END-processing 27.7 31 0.0011 20.4 1.6 20 29-49 6-25 (53)
351 2qe8_A Uncharacterized protein 24.4 3.2E+02 0.011 23.0 17.6 122 128-259 26-161 (343)
352 2dae_A KIAA0733 protein; mitog 24.3 39 0.0013 21.6 1.8 31 26-56 20-50 (75)
353 2ydt_A EXO-1,5-alpha-L-arabino 24.1 2E+02 0.007 25.1 7.2 52 227-284 287-343 (367)
354 2w18_A PALB2, fancn, partner a 22.2 3.9E+02 0.013 23.3 19.7 151 129-294 192-355 (356)
355 1mda_H Methylamine dehydrogena 21.8 2.8E+02 0.0096 24.2 7.6 60 245-308 295-356 (368)
356 1sqj_A OXG-RCBH, oligoxylogluc 21.2 5.8E+02 0.02 24.9 26.3 248 73-355 23-340 (789)
357 2oiz_A Aromatic amine dehydrog 20.9 3.9E+02 0.013 22.8 20.6 72 227-304 265-342 (361)
358 2kwv_A RAD30 homolog B, DNA po 20.1 60 0.0021 18.7 1.8 22 24-45 18-39 (48)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.2e-44 Score=318.80 Aligned_cols=277 Identities=20% Similarity=0.371 Sum_probs=231.5
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT 155 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~ 155 (373)
.++.||++||.......++++||+.+++|..++++|.++ ..++++++ +++||++||.... ...+++++||+.
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~--~~~lyv~GG~~~~--~~~~~~~~~d~~ 85 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRR----CRAGMVYM--AGLVFAVGGFNGS--LRVRTVDSYDPV 85 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCC----BSCEEEEE--TTEEEEESCBCSS--SBCCCEEEEETT
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccc----ccceEEEE--CCEEEEEeCcCCC--ccccceEEECCC
Confidence 467899999976666678999999999999999998544 66777777 9999999998543 456899999999
Q ss_pred CCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeC
Q 017349 156 TNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEG 235 (373)
Q Consensus 156 t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG 235 (373)
+++|+.++++|.+|..|+++.++++||++||.+ ....++++++||+.+++|+.++++|.+|..+++++++++||++||
T Consensus 86 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 163 (302)
T 2xn4_A 86 KDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFD--GSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGG 163 (302)
T ss_dssp TTEEEEECCCSSCCBSCEEEEETTEEEEEEEEC--SSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCceeeCCCCCccccceEEEEECCEEEEEcCCC--CCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeC
Confidence 999999999999999999999999999999987 556678999999999999999999999999999999999999999
Q ss_pred ccCCC-ccCCceEEEeCCCCceeecccCccCCcceEE-EEECCeEEEEeeCC----CcceEEEeCCCCceeeecCCCCCC
Q 017349 236 WTWPF-MFSPRGGVYDINKDTWNLMSDGMKEGWTGIS-IVLEGKLFVISEHG----DCPMKQYNPDDDTWRYVGGDKFPC 309 (373)
Q Consensus 236 ~~~~~-~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~l~v~gg~~----~~~~~~yd~~~~~W~~~~~~~~~~ 309 (373)
..... ...+.+++||+.+++|+.++. ++.++..++ ++++++||++||.+ ..++++||+++++|+.++.+|.+
T Consensus 164 ~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~- 241 (302)
T 2xn4_A 164 YDVASRQCLSTVECYNATTNEWTYIAE-MSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC- 241 (302)
T ss_dssp EETTTTEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC-
T ss_pred CCCCCCccccEEEEEeCCCCcEEECCC-CccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc-
Confidence 87543 346889999999999999976 455554444 78899999999975 46899999999999999987777
Q ss_pred cccccceEEEEeCCEEEEEeCCcee-eeeEEEEeecCCcccceEEecCCCCcCcceeeeeE
Q 017349 310 EVMHRPFAVNGVEGKIYVVSSGLNV-AIGRVYEEQNGGISAEWKVMTAPRAFKDLAPSSCQ 369 (373)
Q Consensus 310 ~~~~~~~~~~~~~~~l~i~GG~~~~-~~~~~~~~~~d~~~~~W~~~~~p~~~~~~~~~~~~ 369 (373)
+..++++.++++|||+||.... ...+++. ||+++++|+.++.+.+..+...+.|.
T Consensus 242 ---r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~--yd~~~~~W~~~~~~~~~~r~~~~~~~ 297 (302)
T 2xn4_A 242 ---RRNAGVCAVNGLLYVVGGDDGSCNLASVEY--YNPTTDKWTVVSSCMSTGRSYAGVTV 297 (302)
T ss_dssp ---CBSCEEEEETTEEEEECCBCSSSBCCCEEE--EETTTTEEEECSSCCSSCCBSCEEEE
T ss_pred ---cccCeEEEECCEEEEECCcCCCcccccEEE--EcCCCCeEEECCcccCcccccceEEE
Confidence 7788999999999999996432 2344555 99999999998743334444444443
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.2e-43 Score=317.37 Aligned_cols=270 Identities=22% Similarity=0.377 Sum_probs=226.7
Q ss_pred hhccCCCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccC--CCCCCcce
Q 017349 71 KSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRS--DTETPMQS 148 (373)
Q Consensus 71 ~~~~~~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~--~~~~~~~~ 148 (373)
+.....++.||++||.......++++||+.+++|..++++|.++ ..++++++ +++||++||... ......++
T Consensus 18 ~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~ 91 (308)
T 1zgk_A 18 SHAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPR----SGLAGCVV--GGLLYAVGGRNNSPDGNTDSSA 91 (308)
T ss_dssp ---CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCC----BSCEEEEE--TTEEEEECCEEEETTEEEECCC
T ss_pred ccccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCccc----ccceEEEE--CCEEEEECCCcCCCCCCeecce
Confidence 33445688999999975556678999999999999999998554 66777777 999999999831 11235678
Q ss_pred eEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECC
Q 017349 149 TIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGS 228 (373)
Q Consensus 149 ~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~ 228 (373)
+++||+.+++|++++++|.+|..|+++.++++||++||.+ ....++++++||+.+++|+.++++|.+|..++++++++
T Consensus 92 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 169 (308)
T 1zgk_A 92 LDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSH--GCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNR 169 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEE--TTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT
T ss_pred EEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCC--CCcccccEEEECCCCCeEeECCCCCccccceEEEEECC
Confidence 9999999999999999999999999999999999999986 55567899999999999999999999999999999999
Q ss_pred EEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEE-EEECCeEEEEeeCC----CcceEEEeCCCCceeeec
Q 017349 229 KMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGIS-IVLEGKLFVISEHG----DCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 229 ~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~l~v~gg~~----~~~~~~yd~~~~~W~~~~ 303 (373)
+||++||..... ..+.+++||+.+++|+.++. ++.++..++ ++++++||++||.. ..++++||+++++|+.+.
T Consensus 170 ~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 247 (308)
T 1zgk_A 170 LLYAVGGFDGTN-RLNSAECYYPERNEWRMITA-MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVA 247 (308)
T ss_dssp EEEEECCBCSSC-BCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECC
T ss_pred EEEEEeCCCCCC-cCceEEEEeCCCCeEeeCCC-CCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECC
Confidence 999999987443 37899999999999999986 455554444 78899999999975 468999999999999999
Q ss_pred CCCCCCcccccceEEEEeCCEEEEEeCCcee-eeeEEEEeecCCcccceEEecC
Q 017349 304 GDKFPCEVMHRPFAVNGVEGKIYVVSSGLNV-AIGRVYEEQNGGISAEWKVMTA 356 (373)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~-~~~~~~~~~~d~~~~~W~~~~~ 356 (373)
.+|.+ +..++++.++++|||+||.... ...+++. ||+++++|+.++.
T Consensus 248 ~~p~~----r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~--yd~~~~~W~~~~~ 295 (308)
T 1zgk_A 248 PMKHR----RSALGITVHQGRIYVLGGYDGHTFLDSVEC--YDPDTDTWSEVTR 295 (308)
T ss_dssp CCSSC----CBSCEEEEETTEEEEECCBCSSCBCCEEEE--EETTTTEEEEEEE
T ss_pred CCCCC----ccceEEEEECCEEEEEcCcCCCcccceEEE--EcCCCCEEeecCC
Confidence 87777 7889999999999999996432 2344555 9999999998754
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.1e-43 Score=313.59 Aligned_cols=261 Identities=19% Similarity=0.321 Sum_probs=224.0
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
.+.||++||... ..++++||+.+++|..++++|.++ ..++++++ +++||++||.. ....+++++||+.+
T Consensus 11 ~~~l~~~GG~~~--~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~--~~~lyv~GG~~---~~~~~~~~~~d~~~ 79 (306)
T 3ii7_A 11 HDYRIALFGGSQ--PQSCRYFNPKDYSWTDIRCPFEKR----RDAACVFW--DNVVYILGGSQ---LFPIKRMDCYNVVK 79 (306)
T ss_dssp CCEEEEEECCSS--TTSEEEEETTTTEEEECCCCSCCC----BSCEEEEE--TTEEEEECCBS---SSBCCEEEEEETTT
T ss_pred cceEEEEeCCCC--CceEEEecCCCCCEecCCCCCccc----ceeEEEEE--CCEEEEEeCCC---CCCcceEEEEeCCC
Confidence 578999999644 677999999999999999999554 67777777 99999999986 35678999999999
Q ss_pred CceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCc
Q 017349 157 NQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGW 236 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~ 236 (373)
++|+.++++|.+|..|+++.++++||++||.+ .....++++++||+.+++|+.++++|.+|..|+++.++++||++||.
T Consensus 80 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 80 DSWYSKLGPPTPRDSLAACAAEGKIYTSGGSE-VGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp TEEEEEECCSSCCBSCEEEEETTEEEEECCBB-TTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCE
T ss_pred CeEEECCCCCccccceeEEEECCEEEEECCCC-CCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCC
Confidence 99999999999999999999999999999986 24456789999999999999999999999999999999999999998
Q ss_pred cCCCc---cCCceEEEeCCCCceeecccCccCCcceEE-EEECCeEEEEeeCC----CcceEEEeCCCCceeeecCCCCC
Q 017349 237 TWPFM---FSPRGGVYDINKDTWNLMSDGMKEGWTGIS-IVLEGKLFVISEHG----DCPMKQYNPDDDTWRYVGGDKFP 308 (373)
Q Consensus 237 ~~~~~---~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~l~v~gg~~----~~~~~~yd~~~~~W~~~~~~~~~ 308 (373)
..... ..+.+++||+++++|+.++. ++.++..++ ++++++||++||.. ..++++||+++++|+.++.+|.+
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELCP-MIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC
T ss_pred CCCCCcccccceEEEeCCCCCeEEECCC-ccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC
Confidence 75433 27899999999999999986 555555444 78899999999964 36899999999999999988777
Q ss_pred CcccccceEEEEeCCEEEEEeCCcee-eeeEEEEeecCCcccceEEecC
Q 017349 309 CEVMHRPFAVNGVEGKIYVVSSGLNV-AIGRVYEEQNGGISAEWKVMTA 356 (373)
Q Consensus 309 ~~~~~~~~~~~~~~~~l~i~GG~~~~-~~~~~~~~~~d~~~~~W~~~~~ 356 (373)
+..++++.++++|||+||.... ...+++. ||+++++|+.++.
T Consensus 238 ----r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~--yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 238 ----GVTVKCAAVGSIVYVLAGFQGVGRLGHILE--YNTETDKWVANSK 280 (306)
T ss_dssp ----BSCCEEEEETTEEEEEECBCSSSBCCEEEE--EETTTTEEEEEEE
T ss_pred ----ccceeEEEECCEEEEEeCcCCCeeeeeEEE--EcCCCCeEEeCCC
Confidence 7889999999999999996433 3344544 9999999998754
No 4
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=4.6e-42 Score=308.00 Aligned_cols=267 Identities=16% Similarity=0.274 Sum_probs=218.3
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCcc----CCCCCCcceeEEE
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMR----SDTETPMQSTIMY 152 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~----~~~~~~~~~~~~y 152 (373)
++.|+++|| .++++|||.+++|.. +++|.+. .+..++++++ +++||++||.. .......+++++|
T Consensus 4 ~~~l~~~GG------~~~~~yd~~~~~W~~-~~~~~p~--~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~ 72 (315)
T 4asc_A 4 QDLIFMISE------EGAVAYDPAANECYC-ASLSSQV--PKNHVSLVTK--ENQVFVAGGLFYNEDNKEDPMSAYFLQF 72 (315)
T ss_dssp EEEEEEEET------TEEEEEETTTTEEEE-EECCCCS--CSSEEEEECT--TCCEEEEEEEEECSSCSSSCEEEEEEEE
T ss_pred ceEEEEEcC------CceEEECCCCCeEec-CCCCCCC--CccceEEEEE--CCEEEEEcCcccCCCCCccccccceEEe
Confidence 467888887 468999999999987 6666332 2355555554 99999999973 1222345669999
Q ss_pred eCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCC-CCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEE
Q 017349 153 RATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGA-NINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMY 231 (373)
Q Consensus 153 d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~ly 231 (373)
|+.+++|+.++++|.+|..|+++.++++||++||.+. .....++++++||+.+++|+.++++|.+|..|++++++++||
T Consensus 73 d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy 152 (315)
T 4asc_A 73 DHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVY 152 (315)
T ss_dssp ETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE
T ss_pred cCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEE
Confidence 9999999999999999999999999999999999742 135678899999999999999999999999999999999999
Q ss_pred EEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEE-EEECCeEEEEeeCC----CcceEEEeCCCCceeeecCCC
Q 017349 232 VTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGIS-IVLEGKLFVISEHG----DCPMKQYNPDDDTWRYVGGDK 306 (373)
Q Consensus 232 v~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~l~v~gg~~----~~~~~~yd~~~~~W~~~~~~~ 306 (373)
++||........+.+++||+.+++|+.++. ++.++..++ ++++++||++||.. ..++++||+++++|+.++.+|
T Consensus 153 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 231 (315)
T 4asc_A 153 VIGGKGSDRKCLNKMCVYDPKKFEWKELAP-MQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFP 231 (315)
T ss_dssp EECCBCTTSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCS
T ss_pred EEeCCCCCCcccceEEEEeCCCCeEEECCC-CCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCC
Confidence 999986566678899999999999999986 555555444 78899999999975 347999999999999999877
Q ss_pred CCCcccccceEEEEeCCEEEEEeCCcee----------eeeEEEEeecCCcccceEEe-cCCCCcC
Q 017349 307 FPCEVMHRPFAVNGVEGKIYVVSSGLNV----------AIGRVYEEQNGGISAEWKVM-TAPRAFK 361 (373)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~i~GG~~~~----------~~~~~~~~~~d~~~~~W~~~-~~p~~~~ 361 (373)
.+ +..++++.++++|||+||.... ...++ +.||+++++|+.+ +.|+..+
T Consensus 232 ~~----r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v--~~yd~~~~~W~~~~~~~r~~~ 291 (315)
T 4asc_A 232 QE----RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDI--WRYNEEEKKWEGVLREIAYAA 291 (315)
T ss_dssp SC----CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEE--EEEETTTTEEEEEESCSSCCS
T ss_pred Cc----ccceeEEEECCEEEEECCccccCcCCccccccccCcE--EEecCCCChhhhhccCCcCcc
Confidence 77 8889999999999999996431 22334 4499999999987 3354443
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.4e-42 Score=305.56 Aligned_cols=263 Identities=19% Similarity=0.356 Sum_probs=224.3
Q ss_pred CCCEEEEEEe-cC-CCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEe
Q 017349 76 SLPYLFIFSF-HK-PTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYR 153 (373)
Q Consensus 76 ~~~~l~~~gg-~~-~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd 153 (373)
.++.||++|| .. .....++++||+.+++|..++.+|.++ ..++++++ +++||++||... ....+++++||
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~--~~~l~v~GG~~~--~~~~~~~~~~d 84 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKR----RYVASVSL--HDRIYVIGGYDG--RSRLSSVECLD 84 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCC----BSCEEEEE--TTEEEEECCBCS--SCBCCCEEEEE
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhh----ccccEEEE--CCEEEEEcCCCC--CccCceEEEEE
Confidence 4778999999 44 234567999999999999999988543 66777777 999999999853 34678999999
Q ss_pred CCCCc---eeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEE
Q 017349 154 ATTNQ---WQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKM 230 (373)
Q Consensus 154 ~~t~~---W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~l 230 (373)
+.+++ |+.++++|.+|..|+++.++++||++||.+ ....++++++||+.+++|+.++++|.+|..+++++++++|
T Consensus 85 ~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i 162 (301)
T 2vpj_A 85 YTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFD--GSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVI 162 (301)
T ss_dssp TTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBC--SSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEE
T ss_pred CCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccC--CCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEE
Confidence 99999 999999999999999999999999999997 5556889999999999999999999999999999999999
Q ss_pred EEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEEECCeEEEEeeCC----CcceEEEeCCCCceeeecCC
Q 017349 231 YVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIVLEGKLFVISEHG----DCPMKQYNPDDDTWRYVGGD 305 (373)
Q Consensus 231 yv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~l~v~gg~~----~~~~~~yd~~~~~W~~~~~~ 305 (373)
|++||.+.. ...+.+++||+.+++|+.++. ++.++..+ +++++++||++||.. ..++++||+++++|+.++.+
T Consensus 163 yv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 240 (301)
T 2vpj_A 163 YCLGGYDGL-NILNSVEKYDPHTGHWTNVTP-MATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM 240 (301)
T ss_dssp EEECCBCSS-CBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred EEECCCCCC-cccceEEEEeCCCCcEEeCCC-CCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC
Confidence 999998743 456899999999999999976 45555444 478899999999975 46899999999999999987
Q ss_pred CCCCcccccceEEEEeCCEEEEEeCCcee-eeeEEEEeecCCcccceEEecC
Q 017349 306 KFPCEVMHRPFAVNGVEGKIYVVSSGLNV-AIGRVYEEQNGGISAEWKVMTA 356 (373)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~l~i~GG~~~~-~~~~~~~~~~d~~~~~W~~~~~ 356 (373)
|.+ +..++++.++++|||+||.... ...+++. ||+++++|+.++.
T Consensus 241 p~~----r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~--yd~~~~~W~~~~~ 286 (301)
T 2vpj_A 241 TTP----RCYVGATVLRGRLYAIAGYDGNSLLSSIEC--YDPIIDSWEVVTS 286 (301)
T ss_dssp SSC----CBSCEEEEETTEEEEECCBCSSSBEEEEEE--EETTTTEEEEEEE
T ss_pred CCc----ccceeEEEECCEEEEEcCcCCCcccccEEE--EcCCCCeEEEcCC
Confidence 777 7888999999999999996433 2344555 9999999998755
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=4.8e-41 Score=301.77 Aligned_cols=260 Identities=16% Similarity=0.329 Sum_probs=212.1
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCC----CCCcceeEEE
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDT----ETPMQSTIMY 152 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~~~y 152 (373)
++.||++||. .+++|||.+++|.. .+++.+. .+..++++++ +++||++||...+. ....+++++|
T Consensus 15 ~~~i~~~GG~------~~~~yd~~~~~W~~-~~~~~~~--~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~ 83 (318)
T 2woz_A 15 KDLILLVNDT------AAVAYDPMENECYL-TALAEQI--PRNHSSIVTQ--QNQVYVVGGLYVDEENKDQPLQSYFFQL 83 (318)
T ss_dssp EEEEEEECSS------EEEEEETTTTEEEE-EEECTTS--CSSEEEEECS--SSCEEEEESSCC-------CCCBEEEEE
T ss_pred cchhhhcccc------ceEEECCCCCceec-ccCCccC--CccceEEEEE--CCEEEEECCcccCccccCCCccccEEEE
Confidence 5689999873 37899999999988 4554222 1244555444 99999999963211 1234469999
Q ss_pred eCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEE
Q 017349 153 RATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYV 232 (373)
Q Consensus 153 d~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv 232 (373)
|+.+++|++++++|.+|..|+++.++++||++||........++++++||+.+++|+.++++|.+|..|++++++++||+
T Consensus 84 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv 163 (318)
T 2woz_A 84 DNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYC 163 (318)
T ss_dssp ETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEE
T ss_pred eCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEE
Confidence 99999999999999999999999999999999998532455678999999999999999999999999999999999999
Q ss_pred EeCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEEECCeEEEEeeCC----CcceEEEeCCCCceeeecCCCC
Q 017349 233 TEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIVLEGKLFVISEHG----DCPMKQYNPDDDTWRYVGGDKF 307 (373)
Q Consensus 233 ~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~l~v~gg~~----~~~~~~yd~~~~~W~~~~~~~~ 307 (373)
+||........+.+++||+.+++|+.++. ++.++..+ +++++++||++||.. ..++++||+++++|+.++.+|.
T Consensus 164 ~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 242 (318)
T 2woz_A 164 LGGKTDDKKCTNRVFIYNPKKGDWKDLAP-MKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ 242 (318)
T ss_dssp ECCEESSSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSS
T ss_pred EcCCCCCCCccceEEEEcCCCCEEEECCC-CCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCC
Confidence 99987556667899999999999999986 45555444 478899999999964 3578999999999999998777
Q ss_pred CCcccccceEEEEeCCEEEEEeCCcee----------eeeEEEEeecCCcccceEEe
Q 017349 308 PCEVMHRPFAVNGVEGKIYVVSSGLNV----------AIGRVYEEQNGGISAEWKVM 354 (373)
Q Consensus 308 ~~~~~~~~~~~~~~~~~l~i~GG~~~~----------~~~~~~~~~~d~~~~~W~~~ 354 (373)
+ +..++++.++++|||+||.... ...+++ .||+++++|+.+
T Consensus 243 ~----r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~--~yd~~~~~W~~~ 293 (318)
T 2woz_A 243 E----RSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIW--KYEDDKKEWAGM 293 (318)
T ss_dssp C----CBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEE--EEETTTTEEEEE
T ss_pred c----ccceEEEEECCEEEEECCeeccCCCCceeccceeeeEE--EEeCCCCEehhh
Confidence 7 7889999999999999996432 123344 499999999987
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.5e-39 Score=295.32 Aligned_cols=265 Identities=16% Similarity=0.189 Sum_probs=210.5
Q ss_pred CCCCEEEEEEecCCCCceeEEEeeCC--CCCeeeCCCCC-CCCCCCCCceEEEEeccCCEEEEEcCc-c--CCCCCCcce
Q 017349 75 LSLPYLFIFSFHKPTARIQWQALDPR--SGRWFVLPPMP-CPKAVCPQAFACTSLPRQGKLFVLGGM-R--SDTETPMQS 148 (373)
Q Consensus 75 ~~~~~l~~~gg~~~~~~~~~~~~d~~--~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~GG~-~--~~~~~~~~~ 148 (373)
..++.||++||... .++++||+. +++|..+++|| .++ ..++++++ +++||++||. . .......++
T Consensus 17 ~~~~~iyv~GG~~~---~~~~~~d~~~~~~~W~~~~~~p~~~R----~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~ 87 (357)
T 2uvk_A 17 IDNDTVYIGLGSAG---TAWYKLDTQAKDKKWTALAAFPGGPR----DQATSAFI--DGNLYVFGGIGKNSEGLTQVFND 87 (357)
T ss_dssp EETTEEEEECGGGT---TCEEEEETTSSSCCEEECCCCTTCCC----BSCEEEEE--TTEEEEECCEEECTTSCEEECCC
T ss_pred EECCEEEEEeCcCC---CeEEEEccccCCCCeeECCCCCCCcC----ccceEEEE--CCEEEEEcCCCCCCCccceeecc
Confidence 44899999998643 368999998 49999999998 444 67788877 9999999998 3 112245789
Q ss_pred eEEEeCCCCceeccCCCC-CcceeeeeeEeCCeEEEEcCCCCCCC----------------------------------C
Q 017349 149 TIMYRATTNQWQLASPML-TPRSFFASGNVNGKIMAVGGTGANIN----------------------------------E 193 (373)
Q Consensus 149 ~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~iyv~GG~~~~~~----------------------------------~ 193 (373)
+++||+.+++|+++++++ .+|..|+++..+++||++||.+ .. .
T Consensus 88 v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 2uvk_A 88 VHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN--QNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYF 165 (357)
T ss_dssp EEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCC--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGC
T ss_pred EEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcC--CCcCcccccchhhcCCcccchhhhhhhhccccccccC
Confidence 999999999999999988 8999999999999999999985 22 2
Q ss_pred cCceEEEEeCCCCeEEeccCCcccccc-ccEEEECCEEEEEeCccCCCccCCceEEEeC--CCCceeecccC-ccCCcce
Q 017349 194 TMTAVECYDPESDTWTTAAKLRMGLAR-YDSAVMGSKMYVTEGWTWPFMFSPRGGVYDI--NKDTWNLMSDG-MKEGWTG 269 (373)
Q Consensus 194 ~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~--~~~~W~~~~~~-~~~~~~~ 269 (373)
.++++++||+.+++|+.++++|.++.. +++++++++||++||........+.+++||+ .+++|+.++.. .+..+.+
T Consensus 166 ~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 166 FNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred CcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 468999999999999999999987655 8889999999999998765566788999987 89999998762 3334444
Q ss_pred E-EEEECCeEEEEeeCCC---------------------cceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEEEE
Q 017349 270 I-SIVLEGKLFVISEHGD---------------------CPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYV 327 (373)
Q Consensus 270 ~-~~~~~~~l~v~gg~~~---------------------~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i 327 (373)
+ +++++++||++||... .++++||+++++|+.++.+|.+ |..++++.++++|||
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~~~~~~~~~i~v 321 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG----RAYGVSLPWNNSLLI 321 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC----CBSSEEEEETTEEEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC----cccceeEEeCCEEEE
Confidence 4 4889999999999531 4789999999999999988877 777889999999999
Q ss_pred EeCCcee--eeeEEEEeecCCcccceEEecC
Q 017349 328 VSSGLNV--AIGRVYEEQNGGISAEWKVMTA 356 (373)
Q Consensus 328 ~GG~~~~--~~~~~~~~~~d~~~~~W~~~~~ 356 (373)
+||.... ...+++. ++.++++|..+.+
T Consensus 322 ~GG~~~~~~~~~~v~~--l~~~~~~~~~~~~ 350 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVL--ITVKDNKVTVQNL 350 (357)
T ss_dssp EEEECGGGCEEEEEEE--EEC-CCSCEEEC-
T ss_pred EeeeCCCCCEeeeEEE--EEEcCcEeEeeec
Confidence 9996432 3455665 6777889987754
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=287.87 Aligned_cols=266 Identities=21% Similarity=0.383 Sum_probs=218.0
Q ss_pred cchhhhhhhcHhHHhhccCchhhHhhhhccCCCCEEEEEEecCC-CCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEE
Q 017349 45 PYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKP-TARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFAC 123 (373)
Q Consensus 45 ~~l~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~l~~~gg~~~-~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~ 123 (373)
.++..+....++|..+...|. .+..+.+...++.||++||... ....++++||+.+++|..++++|.++ ..+++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~ 104 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPS-RRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRR----STLGA 104 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSS-CCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCC----BSCEE
T ss_pred CcEEEEcCcCCcEeEcccCCc-ccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccc----cceEE
Confidence 456667777889998855443 2223344455899999999543 34567999999999999999999554 67788
Q ss_pred EEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeC
Q 017349 124 TSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDP 203 (373)
Q Consensus 124 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~ 203 (373)
+++ +++||++||.... ...+++++||+.+++|+.++++|.+|..|+++.++++||++||.+......++++++||+
T Consensus 105 ~~~--~~~iyv~GG~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~ 180 (302)
T 2xn4_A 105 AVL--NGLLYAVGGFDGS--TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNA 180 (302)
T ss_dssp EEE--TTEEEEEEEECSS--CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEET
T ss_pred EEE--CCEEEEEcCCCCC--ccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeC
Confidence 877 9999999998543 457899999999999999999999999999999999999999986222235789999999
Q ss_pred CCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEEECCeEEEEe
Q 017349 204 ESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIVLEGKLFVIS 282 (373)
Q Consensus 204 ~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~l~v~g 282 (373)
.+++|+.++++|.+|..+++++++++||++||.+. ....+.+++||+++++|+.++. ++.++..+ +++++++||++|
T Consensus 181 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~-~~~~r~~~~~~~~~~~i~v~G 258 (302)
T 2xn4_A 181 TTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDG-PLVRKSVEVYDPTTNAWRQVAD-MNMCRRNAGVCAVNGLLYVVG 258 (302)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSS-SSBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEEC
T ss_pred CCCcEEECCCCccccccccEEEECCEEEEECCCCC-CcccceEEEEeCCCCCEeeCCC-CCCccccCeEEEECCEEEEEC
Confidence 99999999999999999999999999999999874 3456789999999999999986 44444444 478899999999
Q ss_pred eCC----CcceEEEeCCCCceeeec-CCCCCCcccccceEEEEeCCEE
Q 017349 283 EHG----DCPMKQYNPDDDTWRYVG-GDKFPCEVMHRPFAVNGVEGKI 325 (373)
Q Consensus 283 g~~----~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~~~l 325 (373)
|.+ ..++++||+++++|+.++ .+|.+ |..++++.++++|
T Consensus 259 G~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~----r~~~~~~~~~~~i 302 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPTTDKWTVVSSCMSTG----RSYAGVTVIDKRL 302 (302)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECSSCCSSC----CBSCEEEEEEC--
T ss_pred CcCCCcccccEEEEcCCCCeEEECCcccCcc----cccceEEEecccC
Confidence 975 357999999999999997 57777 8889999888875
No 9
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=292.36 Aligned_cols=270 Identities=16% Similarity=0.277 Sum_probs=220.5
Q ss_pred cchhhhhhhcHhHHhhccCch-hhHhhhhccCCCCEEEEEEec-----CCC--CceeEEEeeCCCCCeeeCCCCCCCCCC
Q 017349 45 PYQALVRSVSYSWNKAITDPG-FALCKKSLSLSLPYLFIFSFH-----KPT--ARIQWQALDPRSGRWFVLPPMPCPKAV 116 (373)
Q Consensus 45 ~~l~~~~~v~k~W~~l~~~~~-~~~~~~~~~~~~~~l~~~gg~-----~~~--~~~~~~~~d~~~~~W~~~~~~~~~~~~ 116 (373)
..+..+....++|.. ...|. ..+..+.....++.||++||. ... ...++++||+.+++|..++++|.++
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r-- 89 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPR-- 89 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCE--
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcch--
Confidence 345667777888975 33331 233344455668999999994 111 2245899999999999999999544
Q ss_pred CCCceEEEEeccCCEEEEEcCccC-CCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcC
Q 017349 117 CPQAFACTSLPRQGKLFVLGGMRS-DTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETM 195 (373)
Q Consensus 117 ~~~~~~~~~~~~~~~i~v~GG~~~-~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~ 195 (373)
..++++++ +++||++||... ......+++++||+.+++|+.++++|.+|..|+++.++++||++||.. .....+
T Consensus 90 --~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~ 164 (315)
T 4asc_A 90 --CLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKG-SDRKCL 164 (315)
T ss_dssp --ESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC-TTSCBC
T ss_pred --hceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCC-CCCccc
Confidence 66777777 999999999753 224567899999999999999999999999999999999999999984 255678
Q ss_pred ceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEEE
Q 017349 196 TAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIVL 274 (373)
Q Consensus 196 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~ 274 (373)
+++++||+.+++|+.++++|.+|..|++++++++||++||.... ...+.+++||+++++|+.++. ++.++..+ ++++
T Consensus 165 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~ 242 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDT-GLTSSAEVYSITDNKWAPFEA-FPQERSSLSLVSL 242 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSS-SEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCC-CccceEEEEECCCCeEEECCC-CCCcccceeEEEE
Confidence 89999999999999999999999999999999999999998743 356789999999999999986 55555544 4788
Q ss_pred CCeEEEEeeCC-------------CcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEEEEEeC
Q 017349 275 EGKLFVISEHG-------------DCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 275 ~~~l~v~gg~~-------------~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
+++||++||.. ..++++||+++++|+.+. +.| +..++++.++++||++..
T Consensus 243 ~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~--~~~----r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 243 VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL--REI----AYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE--SCS----SCCSSCEEEEEEECGGGS
T ss_pred CCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc--cCC----cCccceEEeCCEEEEEEe
Confidence 99999999963 256899999999999993 666 777889999999999876
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=7.6e-39 Score=285.88 Aligned_cols=263 Identities=17% Similarity=0.256 Sum_probs=218.0
Q ss_pred ccchhhhhhhcHhHHhhccCchhhHhhhhccCCCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEE
Q 017349 44 YPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFAC 123 (373)
Q Consensus 44 ~~~l~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~ 123 (373)
..++..+....++|..+...|. .+..+.....++.||++||.......++++||+.+++|..++++|.++ ..+++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~ 97 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFE-KRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPR----DSLAA 97 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSC-CCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCC----BSCEE
T ss_pred CceEEEecCCCCCEecCCCCCc-ccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccc----cceeE
Confidence 4566677888889998865543 222344445689999999976555678999999999999999998554 67777
Q ss_pred EEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCc----CceEE
Q 017349 124 TSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINET----MTAVE 199 (373)
Q Consensus 124 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~----~~~~~ 199 (373)
+++ +++||++||.+.. ....+++++||+.+++|+.++++|.+|..|+++.++++||++||.. .... +++++
T Consensus 98 ~~~--~~~iyv~GG~~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 98 CAA--EGKIYTSGGSEVG-NSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSL--GNNVSGRVLNSCE 172 (306)
T ss_dssp EEE--TTEEEEECCBBTT-BSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEE--SCTTTCEECCCEE
T ss_pred EEE--CCEEEEECCCCCC-CcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCC--CCCCcccccceEE
Confidence 777 9999999998532 3567899999999999999999999999999999999999999986 3333 88999
Q ss_pred EEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEEECCeE
Q 017349 200 CYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIVLEGKL 278 (373)
Q Consensus 200 ~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~l 278 (373)
+||+.+++|+.++++|.+|..|+++.++++||++||.... ...+.+++||+.+++|+.++. ++.++..+ +++++++|
T Consensus 173 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~i 250 (306)
T 3ii7_A 173 VYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGL-GGLDNVEYYDIKLNEWKMVSP-MPWKGVTVKCAAVGSIV 250 (306)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT-EEBCCEEEEETTTTEEEECCC-CSCCBSCCEEEEETTEE
T ss_pred EeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCC-CCCceEEEeeCCCCcEEECCC-CCCCccceeEEEECCEE
Confidence 9999999999999999999999999999999999998743 456789999999999999976 55555444 47889999
Q ss_pred EEEeeCC----CcceEEEeCCCCceeeecCCCCCCcccccceEEEEeC
Q 017349 279 FVISEHG----DCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVE 322 (373)
Q Consensus 279 ~v~gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 322 (373)
|++||.+ ..++++||+++++|+.++.+|.+ +..++++.+.
T Consensus 251 ~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----r~~~~~~~~~ 294 (306)
T 3ii7_A 251 YVLAGFQGVGRLGHILEYNTETDKWVANSKVRAF----PVTSCLICVV 294 (306)
T ss_dssp EEEECBCSSSBCCEEEEEETTTTEEEEEEEEECC----SCTTCEEEEE
T ss_pred EEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccc----cceeEEEEEC
Confidence 9999964 46899999999999999988877 6666665543
No 11
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-39 Score=289.48 Aligned_cols=268 Identities=17% Similarity=0.292 Sum_probs=218.8
Q ss_pred hhhhhhhcHhHHhhccCch-hhHhhhhccCCCCEEEEEEecCC-------CCceeEEEeeCCCCCeeeCCCCCCCCCCCC
Q 017349 47 QALVRSVSYSWNKAITDPG-FALCKKSLSLSLPYLFIFSFHKP-------TARIQWQALDPRSGRWFVLPPMPCPKAVCP 118 (373)
Q Consensus 47 l~~~~~v~k~W~~l~~~~~-~~~~~~~~~~~~~~l~~~gg~~~-------~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~ 118 (373)
...+....++|... ..+. ..+..+.....++.||++||... .....+++||+.+++|..++++|.++
T Consensus 26 ~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r---- 100 (318)
T 2woz_A 26 AVAYDPMENECYLT-ALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSAR---- 100 (318)
T ss_dssp EEEEETTTTEEEEE-EECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCB----
T ss_pred eEEECCCCCceecc-cCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccc----
Confidence 56677788899773 2221 22233445567899999999421 11234899999999999999999554
Q ss_pred CceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceE
Q 017349 119 QAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAV 198 (373)
Q Consensus 119 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (373)
..++++++ +++||++||.........+++++||+.+++|+.++++|.+|..|+++.++++||++||.. .....++++
T Consensus 101 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~~~ 177 (318)
T 2woz_A 101 CLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKT-DDKKCTNRV 177 (318)
T ss_dssp CSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEE-SSSCBCCCE
T ss_pred cccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCC-CCCCccceE
Confidence 67777777 999999999864344667899999999999999999999999999999999999999985 144568899
Q ss_pred EEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEEECCe
Q 017349 199 ECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIVLEGK 277 (373)
Q Consensus 199 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~ 277 (373)
++||+.+++|+.++++|.+|..|++++++++||++||... ....+.+++||+++++|+.++. ++.++..+ +++++++
T Consensus 178 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~ 255 (318)
T 2woz_A 178 FIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTE-DGLSASVEAFDLKTNKWEVMTE-FPQERSSISLVSLAGS 255 (318)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEET-TEEEEEEEEEETTTCCEEECCC-CSSCCBSCEEEEETTE
T ss_pred EEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCC-CCccceEEEEECCCCeEEECCC-CCCcccceEEEEECCE
Confidence 9999999999999999999999999999999999999874 3455789999999999999986 44555444 4789999
Q ss_pred EEEEeeCC-------------CcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEEEEEeC
Q 017349 278 LFVISEHG-------------DCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 278 l~v~gg~~-------------~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
||++||.. ..++++||+++++|+.+ +|.+ +..++++.++++|||+.-
T Consensus 256 i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~----r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 256 LYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEI----RYASGASCLATRLNLFKL 315 (318)
T ss_dssp EEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCC----GGGTTCEEEEEEEEGGGC
T ss_pred EEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--cccc----cccccceeeCCEEEEEEe
Confidence 99999964 25799999999999999 4666 788889999999998753
No 12
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.7e-38 Score=283.86 Aligned_cols=261 Identities=20% Similarity=0.354 Sum_probs=216.7
Q ss_pred CccchhhhhhhcHhHHhhccCchhhHhhhhccCCCCEEEEEEec----CC-CCceeEEEeeCCCCCeeeCCCCCCCCCCC
Q 017349 43 PYPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFH----KP-TARIQWQALDPRSGRWFVLPPMPCPKAVC 117 (373)
Q Consensus 43 p~~~l~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~l~~~gg~----~~-~~~~~~~~~d~~~~~W~~~~~~~~~~~~~ 117 (373)
+..++..+....++|..+...|. .+..+.+...++.||++||. .. ....++++||+.+++|..++++|.++
T Consensus 37 ~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r--- 112 (308)
T 1zgk_A 37 SLSYLEAYNPSNGTWLRLADLQV-PRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPR--- 112 (308)
T ss_dssp BCCCEEEEETTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCC---
T ss_pred CcceEEEEcCCCCeEeECCCCCc-ccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCc---
Confidence 34567788888999999855443 22233444568999999985 22 23457899999999999999998554
Q ss_pred CCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCce
Q 017349 118 PQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTA 197 (373)
Q Consensus 118 ~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 197 (373)
..++++++ +++||++||.... ...+++++||+.+++|+.++++|.+|..|+++.++++||++||.+ ....+++
T Consensus 113 -~~~~~~~~--~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~ 185 (308)
T 1zgk_A 113 -NRIGVGVI--DGHIYAVGGSHGC--IHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFD--GTNRLNS 185 (308)
T ss_dssp -BTCEEEEE--TTEEEEECCEETT--EECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC--SSCBCCC
T ss_pred -cccEEEEE--CCEEEEEcCCCCC--cccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCC--CCCcCce
Confidence 67787777 9999999998542 356789999999999999999999999999999999999999987 4555889
Q ss_pred EEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEEECC
Q 017349 198 VECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIVLEG 276 (373)
Q Consensus 198 ~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~ 276 (373)
+++||+.+++|+.++++|.+|..+++++++++||++||... ....+.+++||+++++|+.++. ++.++..+ ++++++
T Consensus 186 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~ 263 (308)
T 1zgk_A 186 AECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDG-QDQLNSVERYDVETETWTFVAP-MKHRRSALGITVHQG 263 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS-SSBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEETT
T ss_pred EEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCC-CCccceEEEEeCCCCcEEECCC-CCCCccceEEEEECC
Confidence 99999999999999999999999999999999999999874 3446899999999999999986 55555444 478899
Q ss_pred eEEEEeeCC----CcceEEEeCCCCceeeecCCCCCCcccccceEEEE
Q 017349 277 KLFVISEHG----DCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNG 320 (373)
Q Consensus 277 ~l~v~gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 320 (373)
+||++||.+ ..++++||+++++|+.++.+|.+ |..++++.
T Consensus 264 ~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~----r~~~~~~~ 307 (308)
T 1zgk_A 264 RIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSG----RSGVGVAV 307 (308)
T ss_dssp EEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC----CBSCEEEE
T ss_pred EEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCC----cccceeEe
Confidence 999999965 46899999999999999988877 77777764
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=279.74 Aligned_cols=262 Identities=19% Similarity=0.299 Sum_probs=217.2
Q ss_pred ccchhhhhhhcHhHHhhccCchhhHhhhhccCCCCEEEEEEecCC-CCceeEEEeeCCCCC---eeeCCCCCCCCCCCCC
Q 017349 44 YPYQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKP-TARIQWQALDPRSGR---WFVLPPMPCPKAVCPQ 119 (373)
Q Consensus 44 ~~~l~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~l~~~gg~~~-~~~~~~~~~d~~~~~---W~~~~~~~~~~~~~~~ 119 (373)
..++..+....++|..+...|. .+..+.....++.||++||... ....++++||+.+++ |..++++|.++ .
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r----~ 104 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITR-KRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRR----G 104 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSS-CCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCC----B
T ss_pred eeEEEEEcCCCCeEEeCCCCCh-hhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCc----c
Confidence 3456777778889998865553 2223444456899999999543 345679999999999 99999999554 6
Q ss_pred ceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEE
Q 017349 120 AFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVE 199 (373)
Q Consensus 120 ~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 199 (373)
.++++++ +++||++||.... ...+++++||+.+++|+.++++|.+|..|+++.++++||++||.+ .....++++
T Consensus 105 ~~~~~~~--~~~lyv~GG~~~~--~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~~~ 178 (301)
T 2vpj_A 105 LAGATTL--GDMIYVSGGFDGS--RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYD--GLNILNSVE 178 (301)
T ss_dssp SCEEEEE--TTEEEEECCBCSS--CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBC--SSCBCCCEE
T ss_pred ceeEEEE--CCEEEEEcccCCC--cccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCC--CCcccceEE
Confidence 7777777 9999999998643 457899999999999999999999999999999999999999987 555788999
Q ss_pred EEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEEECCeE
Q 017349 200 CYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIVLEGKL 278 (373)
Q Consensus 200 ~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~l 278 (373)
+||+.+++|+.++++|.+|..++++.++++||++||.+.. ...+.+++||+++++|+.++. ++.++..+ +++++++|
T Consensus 179 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~-~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~i 256 (301)
T 2vpj_A 179 KYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGT-AHLSSVEAYNIRTDSWTTVTS-MTTPRCYVGATVLRGRL 256 (301)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSS-SBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEE
T ss_pred EEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCC-cccceEEEEeCCCCcEEECCC-CCCcccceeEEEECCEE
Confidence 9999999999999999999999999999999999998743 346899999999999999986 44444443 47889999
Q ss_pred EEEeeCCC----cceEEEeCCCCceeeecCCCCCCcccccceEEEEeC
Q 017349 279 FVISEHGD----CPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVE 322 (373)
Q Consensus 279 ~v~gg~~~----~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 322 (373)
|++||.+. ..+++||+++++|+.++.+|.+ +..++++.++
T Consensus 257 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~----r~~~~~~~~~ 300 (301)
T 2vpj_A 257 YAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQ----RCDAGVCVLR 300 (301)
T ss_dssp EEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEE----EESCEEEEEE
T ss_pred EEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcc----cccceEEEeC
Confidence 99999752 6789999999999999987777 7777777653
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.3e-34 Score=264.12 Aligned_cols=235 Identities=15% Similarity=0.213 Sum_probs=182.7
Q ss_pred eCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC--CCceeccCCCC-CcceeeeeeEeCCeEE
Q 017349 106 VLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT--TNQWQLASPML-TPRSFFASGNVNGKIM 182 (373)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~--t~~W~~~~~~~-~~r~~~~~~~~~~~iy 182 (373)
.+++||.++ ..+.++++ +++||++||... +++++||+. +++|+.++++| .+|..|+++.++++||
T Consensus 2 ~l~~lP~~r----~~~~~~~~--~~~iyv~GG~~~------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~ly 69 (357)
T 2uvk_A 2 VLPETPVPF----KSGTGAID--NDTVYIGLGSAG------TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLY 69 (357)
T ss_dssp CSCCCSSCC----CSCEEEEE--TTEEEEECGGGT------TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEE
T ss_pred CCCCCCccc----cceEEEEE--CCEEEEEeCcCC------CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEE
Confidence 467788544 55666666 999999999743 379999998 48999999999 8999999999999999
Q ss_pred EEcCC-C--CCCCCcCceEEEEeCCCCeEEeccCCc-cccccccEEEECCEEEEEeCccCCC------------------
Q 017349 183 AVGGT-G--ANINETMTAVECYDPESDTWTTAAKLR-MGLARYDSAVMGSKMYVTEGWTWPF------------------ 240 (373)
Q Consensus 183 v~GG~-~--~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~~~~~~~~~~~~~lyv~gG~~~~~------------------ 240 (373)
++||. . ......++++++||+.+++|+.+++++ .+|..|++++.+++||++||.....
T Consensus 70 v~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~ 149 (357)
T 2uvk_A 70 VFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAI 149 (357)
T ss_dssp EECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred EEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccch
Confidence 99998 2 112346789999999999999999888 8899999999999999999975321
Q ss_pred ---------------ccCCceEEEeCCCCceeecccCccCCcc-eEEEEECCeEEEEeeCC-----CcceEEEeC--CCC
Q 017349 241 ---------------MFSPRGGVYDINKDTWNLMSDGMKEGWT-GISIVLEGKLFVISEHG-----DCPMKQYNP--DDD 297 (373)
Q Consensus 241 ---------------~~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~l~v~gg~~-----~~~~~~yd~--~~~ 297 (373)
...+.+++||+.+++|+.++..+..++. ..+++++++||++||.. ...+++||+ +++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~ 229 (357)
T 2uvk_A 150 DKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL 229 (357)
T ss_dssp HHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C
T ss_pred hhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC
Confidence 2357899999999999999763333344 44588899999999963 467888976 899
Q ss_pred ceeeecCCCCCCcccccceEEEEeCCEEEEEeCCcee------------------eeeEEEEeecCCcccceEEecC
Q 017349 298 TWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSGLNV------------------AIGRVYEEQNGGISAEWKVMTA 356 (373)
Q Consensus 298 ~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~------------------~~~~~~~~~~d~~~~~W~~~~~ 356 (373)
+|+.+..++.| ..+..++++..+++|||+||.... ...++ +.||+++++|+.+..
T Consensus 230 ~W~~~~~~~~~--~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 230 KWNKLAPVSSP--DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYST--DIHLWHNGKWDKSGE 302 (357)
T ss_dssp EEEECCCSSTT--TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECC--EEEECC---CEEEEE
T ss_pred cEEecCCCCCC--cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeE--EEEecCCCceeeCCC
Confidence 99999877655 235678899999999999995321 11233 449999999998754
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.5e-34 Score=284.27 Aligned_cols=246 Identities=11% Similarity=0.180 Sum_probs=196.0
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCC-C-----CCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCccee
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLP-P-----MPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQST 149 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~ 149 (373)
.++.||++||......+++++||+.+++|..++ + +|.+ +..|+++++..+++||++||..... ...+++
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~----R~~hs~~~~~~~~~lyv~GG~~~~~-~~~~dv 470 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVA----RMCHTFTTISRNNQLLLIGGRKAPH-QGLSDN 470 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCC----CBSCEEEEETTTTEEEEECCBSSTT-CBCCCC
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCcc----ccceEEEEEccCCEEEEEcCCCCCC-CccccE
Confidence 688999999965555677999999999999988 6 4433 3566666553378999999986443 367899
Q ss_pred EEEeCCCCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccC---CccccccccEEE
Q 017349 150 IMYRATTNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAK---LRMGLARYDSAV 225 (373)
Q Consensus 150 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~---~~~~~~~~~~~~ 225 (373)
++||+.+++|+.++++|.+|..|+++.+ +++||++||.+ ... ++++||+.+++|+.++. +|.+|..|++++
T Consensus 471 ~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~--~~~---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v 545 (695)
T 2zwa_A 471 WIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVT--EGP---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLE 545 (695)
T ss_dssp EEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBC--SSC---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEE
T ss_pred EEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCC--CCC---CEEEEECCCCceEEccCCCCCCCcccceeEEE
Confidence 9999999999999999999999999996 99999999986 322 89999999999999986 899999999888
Q ss_pred EC---CEEEEEeCccCCC-ccCCceEEEeCCCCc------eeecccCccCCcceEE-EEEC-CeEEEEeeCC-------C
Q 017349 226 MG---SKMYVTEGWTWPF-MFSPRGGVYDINKDT------WNLMSDGMKEGWTGIS-IVLE-GKLFVISEHG-------D 286 (373)
Q Consensus 226 ~~---~~lyv~gG~~~~~-~~~~~i~~yd~~~~~------W~~~~~~~~~~~~~~~-~~~~-~~l~v~gg~~-------~ 286 (373)
++ ++||++||....+ ...+.+++||+.+++ |+.+...++.++.+++ ++++ ++||++||.. .
T Consensus 546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 625 (695)
T 2zwa_A 546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRT 625 (695)
T ss_dssp EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTT
T ss_pred EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCC
Confidence 76 8999999986443 567899999999999 8887652234444444 6778 9999999964 4
Q ss_pred cceEEEeCCCCceeeecCCCCCCc------ccccceEEEEeCC-EEEEEeCCcee
Q 017349 287 CPMKQYNPDDDTWRYVGGDKFPCE------VMHRPFAVNGVEG-KIYVVSSGLNV 334 (373)
Q Consensus 287 ~~~~~yd~~~~~W~~~~~~~~~~~------~~~~~~~~~~~~~-~l~i~GG~~~~ 334 (373)
.++++||+.+++|+.+. +|.. ..+..|+++.+++ +|||+||+.++
T Consensus 626 ~~v~~yd~~t~~W~~~~---~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~c 677 (695)
T 2zwa_A 626 NSIISLDPLSETLTSIP---ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATC 677 (695)
T ss_dssp TSEEEEETTTTEEEECC---CCHHHHHHSCCCCSSCEEECC---CEEEECCEEEC
T ss_pred CeEEEEECCCCeEEEee---ccccccCCCCccceeeeEEEeCCCEEEEEeCCccC
Confidence 67999999999999653 3211 1345677777766 99999998765
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=7.6e-33 Score=271.78 Aligned_cols=290 Identities=13% Similarity=0.129 Sum_probs=212.8
Q ss_pred hhhhhhhcHhHHhhccCchhhHhhhhccCC--CCEEEEEEecCCC-------CceeEEEeeCCCCCeeeCCCCCCCCCCC
Q 017349 47 QALVRSVSYSWNKAITDPGFALCKKSLSLS--LPYLFIFSFHKPT-------ARIQWQALDPRSGRWFVLPPMPCPKAVC 117 (373)
Q Consensus 47 l~~~~~v~k~W~~l~~~~~~~~~~~~~~~~--~~~l~~~gg~~~~-------~~~~~~~~d~~~~~W~~~~~~~~~~~~~ 117 (373)
...+.....+|..+...|... +..+.. ++.||++||.... ....+++||+.+++|..++.|+.++ .
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~---~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~--~ 242 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVP---AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH--D 242 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCC---SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC--C
T ss_pred cccCCCCCCeeeeeccCCCCc---eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC--C
Confidence 344555667898887777621 222322 8899999985432 2346899999999999998887443 1
Q ss_pred CCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCc
Q 017349 118 PQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMT 196 (373)
Q Consensus 118 ~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~ 196 (373)
.+.++++++ .+++||++||... .++++||+.+++|+++++|+.+|..|+++.+ +++||++||... +...++
T Consensus 243 ~~~~~~~~~-~~g~lyv~GG~~~------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~-~~~~~~ 314 (656)
T 1k3i_A 243 MFCPGISMD-GNGQIVVTGGNDA------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWS-GGVFEK 314 (656)
T ss_dssp CSSCEEEEC-TTSCEEEECSSST------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCC-SSSCCC
T ss_pred CccccccCC-CCCCEEEeCCCCC------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCccc-CCcccc
Confidence 223333333 3899999999742 2799999999999999999999999999998 999999999531 445678
Q ss_pred eEEEEeCCCCeEEec-----cCCccccccccEEEECCEEEEEeCccCCC---ccCCceEEEeCCCCceeecccCcc----
Q 017349 197 AVECYDPESDTWTTA-----AKLRMGLARYDSAVMGSKMYVTEGWTWPF---MFSPRGGVYDINKDTWNLMSDGMK---- 264 (373)
Q Consensus 197 ~~~~yd~~t~~W~~~-----~~~~~~~~~~~~~~~~~~lyv~gG~~~~~---~~~~~i~~yd~~~~~W~~~~~~~~---- 264 (373)
++++||+.+++|+.+ .+|+..+. ++++..++++|++||.++.. ...+.++.||++++.|.......+
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p~~~~~~-~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNPMLTADK-QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGGGCCCCT-TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred cceEeCCCCCcceeCCCccccccccccc-cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 999999999999997 34555543 35556799999999876421 235689999999999875432121
Q ss_pred ---CCcceEEEE---ECCeEEEEeeCC-------Cc---ceEEEeCCCCceeeec--CCCCCCcccccceEEEEe-CCEE
Q 017349 265 ---EGWTGISIV---LEGKLFVISEHG-------DC---PMKQYNPDDDTWRYVG--GDKFPCEVMHRPFAVNGV-EGKI 325 (373)
Q Consensus 265 ---~~~~~~~~~---~~~~l~v~gg~~-------~~---~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~~-~~~l 325 (373)
.+..+.++. .+++||++||.. .. .+++||+.+++|..+. .||.+ |..++++.+ +++|
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~----R~~~~~~~l~~g~i 469 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA----RTFHTSVVLPDGST 469 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC----CBSCEEEECTTSCE
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC----cccCCeEECCCCCE
Confidence 123344343 489999999953 12 6889999999999986 67766 777887776 9999
Q ss_pred EEEeCCcee-------eeeEEEEeecCCcccceEEecC
Q 017349 326 YVVSSGLNV-------AIGRVYEEQNGGISAEWKVMTA 356 (373)
Q Consensus 326 ~i~GG~~~~-------~~~~~~~~~~d~~~~~W~~~~~ 356 (373)
||+||.... ...++ +.||+++++|+.+..
T Consensus 470 ~v~GG~~~~~~~~~~~~~~~v--~~ydp~t~~W~~~~~ 505 (656)
T 1k3i_A 470 FITGGQRRGIPFEDSTPVFTP--EIYVPEQDTFYKQNP 505 (656)
T ss_dssp EEECCBSBCCTTCCCSBCCCC--EEEEGGGTEEEECCC
T ss_pred EEECCcccCcCcCCCCcccce--EEEcCCCCceeecCC
Confidence 999996421 12333 449999999998764
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.7e-31 Score=262.54 Aligned_cols=216 Identities=10% Similarity=0.143 Sum_probs=180.5
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccC-C-----CCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEE
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLAS-P-----MLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVEC 200 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~-~-----~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 200 (373)
+++||++||... ...+++++||+.+++|+.++ + +|.+|..|+++.+ +++||++||.+. ....++++++
T Consensus 397 ~~~iyv~GG~~~---~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~-~~~~~~dv~~ 472 (695)
T 2zwa_A 397 GNDVFYMGGSNP---YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA-PHQGLSDNWI 472 (695)
T ss_dssp SSCEEEECCBSS---SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS-TTCBCCCCEE
T ss_pred CCEEEEECCCCC---CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC-CCCccccEEE
Confidence 899999999854 46789999999999999987 5 7899999999999 999999999872 3336889999
Q ss_pred EeCCCCeEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceeeccc--CccCCcceEE-EEEC-
Q 017349 201 YDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD--GMKEGWTGIS-IVLE- 275 (373)
Q Consensus 201 yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~--~~~~~~~~~~-~~~~- 275 (373)
||+.+++|+.++++|.+|..|+++++ +++||++||.+... .+++||+.+++|+.++. .++.++.+++ ++++
T Consensus 473 yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~ 548 (695)
T 2zwa_A 473 FDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDP 548 (695)
T ss_dssp EETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEET
T ss_pred EeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcccceeEEEEeC
Confidence 99999999999999999999999996 99999999987443 89999999999999875 2455555555 6666
Q ss_pred --CeEEEEeeCC------CcceEEEeCCCCc------eeeecCCC-CCCcccccceEEEEeC-CEEEEEeCCcee----e
Q 017349 276 --GKLFVISEHG------DCPMKQYNPDDDT------WRYVGGDK-FPCEVMHRPFAVNGVE-GKIYVVSSGLNV----A 335 (373)
Q Consensus 276 --~~l~v~gg~~------~~~~~~yd~~~~~------W~~~~~~~-~~~~~~~~~~~~~~~~-~~l~i~GG~~~~----~ 335 (373)
++||++||.. ..++++||+.+++ |+.+..+| .+ |..++++.++ ++|||+||.... .
T Consensus 549 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~----R~~~~~~~~~~~~iyv~GG~~~~~~~~~ 624 (695)
T 2zwa_A 549 VSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQ----RYGSQIKYITPRKLLIVGGTSPSGLFDR 624 (695)
T ss_dssp TTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGC----CBSCEEEEEETTEEEEECCBCSSCCCCT
T ss_pred CCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCC----cccceEEEeCCCEEEEECCccCCCCCCC
Confidence 8999999973 3679999999999 88887643 44 7888999888 999999996432 2
Q ss_pred eeEEEEeecCCcccceEEecCCC
Q 017349 336 IGRVYEEQNGGISAEWKVMTAPR 358 (373)
Q Consensus 336 ~~~~~~~~~d~~~~~W~~~~~p~ 358 (373)
..+++. ||+++++|+.++.|.
T Consensus 625 ~~~v~~--yd~~t~~W~~~~~p~ 645 (695)
T 2zwa_A 625 TNSIIS--LDPLSETLTSIPISR 645 (695)
T ss_dssp TTSEEE--EETTTTEEEECCCCH
T ss_pred CCeEEE--EECCCCeEEEeeccc
Confidence 344554 999999999876654
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=2.8e-29 Score=246.44 Aligned_cols=247 Identities=19% Similarity=0.251 Sum_probs=182.7
Q ss_pred EEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCC----CCCcceeEEEeCCCCceeccCCCCCcc
Q 017349 94 WQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDT----ETPMQSTIMYRATTNQWQLASPMLTPR 169 (373)
Q Consensus 94 ~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~~~yd~~t~~W~~~~~~~~~r 169 (373)
+..|||.+++|..++++|. ..+.++++..+++||++||...+. ......+++||+.+++|+.++.++.+|
T Consensus 168 ~~~~dp~~~~W~~~~~~P~------~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~ 241 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI------VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH 241 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS------CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC
T ss_pred cccCCCCCCeeeeeccCCC------CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC
Confidence 4568999999999988883 234455554489999999975432 123457999999999999999998887
Q ss_pred eeee--ee-EeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCc
Q 017349 170 SFFA--SG-NVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPR 245 (373)
Q Consensus 170 ~~~~--~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~ 245 (373)
..+. ++ ..+++||++||.. . .++++||+.+++|+++++|+.+|..|+++++ +|+||++||........+.
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~--~----~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGND--A----KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKN 315 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSS--T----TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCC
T ss_pred CCccccccCCCCCCEEEeCCCC--C----CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCccccc
Confidence 6653 33 3589999999986 2 2799999999999999999999999999998 9999999995444456789
Q ss_pred eEEEeCCCCceeecc----cCccCCcceEEEEECCeEEEEeeCC--------CcceEEEeCCCCceeeecC-CCC----C
Q 017349 246 GGVYDINKDTWNLMS----DGMKEGWTGISIVLEGKLFVISEHG--------DCPMKQYNPDDDTWRYVGG-DKF----P 308 (373)
Q Consensus 246 i~~yd~~~~~W~~~~----~~~~~~~~~~~~~~~~~l~v~gg~~--------~~~~~~yd~~~~~W~~~~~-~~~----~ 308 (373)
+++||+.+++|+.++ .+++..+...++..++++|++||.+ ...+++||++++.|..... .+. +
T Consensus 316 ~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~ 395 (656)
T 1k3i_A 316 GEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVA 395 (656)
T ss_dssp EEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEEC
T ss_pred ceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccC
Confidence 999999999999874 2344444433356799999999754 3578999999999875432 111 0
Q ss_pred CcccccceEEE--EeCCEEEEEeCCce----eeee---EEEEeecCCcccceEEec
Q 017349 309 CEVMHRPFAVN--GVEGKIYVVSSGLN----VAIG---RVYEEQNGGISAEWKVMT 355 (373)
Q Consensus 309 ~~~~~~~~~~~--~~~~~l~i~GG~~~----~~~~---~~~~~~~d~~~~~W~~~~ 355 (373)
+......+++ ..+++|||+||... .... .++ .||++++.|..+.
T Consensus 396 -~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~--~yd~~~~~W~~~~ 448 (656)
T 1k3i_A 396 -PDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIIT--LGEPGTSPNTVFA 448 (656)
T ss_dssp -CCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEE--CCSTTSCCEEEEC
T ss_pred -CCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEE--cCCCCCCCeeEEc
Confidence 0012233333 35899999999532 1122 333 4999999999874
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.03 E-value=1.4e-07 Score=87.70 Aligned_cols=242 Identities=12% Similarity=0.118 Sum_probs=133.4
Q ss_pred CCCCCCCCChHHHHHhhccCCccchhhhhhhcHhHHhhccCchhhHhhhh-ccC--------------------------
Q 017349 23 TQPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKS-LSL-------------------------- 75 (373)
Q Consensus 23 ~~~~~~~LP~dl~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~~~~~~~~-~~~-------------------------- 75 (373)
..+.+..||+|++..||.+|+.+++.++..|||+|+.+..++.+.+.... ...
T Consensus 15 ~~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~ 94 (445)
T 2ovr_B 15 QRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYI 94 (445)
T ss_dssp CCSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHH
T ss_pred cCChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHh
Confidence 46789999999999999999999999999999999999887654331100 000
Q ss_pred ------------CCCEEEEEEecCC----------------CCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEec
Q 017349 76 ------------SLPYLFIFSFHKP----------------TARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLP 127 (373)
Q Consensus 76 ------------~~~~l~~~gg~~~----------------~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 127 (373)
.......+.+... .....+.+||..+.+-... +.... ....+...
T Consensus 95 ~~~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~--~~~h~----~~v~~~~~- 167 (445)
T 2ovr_B 95 RQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRT--LVGHT----GGVWSSQM- 167 (445)
T ss_dssp HHHHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEE--CCCCS----SCEEEEEE-
T ss_pred hhhhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEE--EcCCC----CCEEEEEe-
Confidence 0000011111100 0122356677766543322 22000 11222222
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT 207 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 207 (373)
.+.+++.|+.+ ..+.+||..+++-... +...........+++..++.|+.+ ..+.+||..+++
T Consensus 168 -~~~~l~s~~~d-------g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~l~s~s~d-------g~i~~wd~~~~~ 230 (445)
T 2ovr_B 168 -RDNIIISGSTD-------RTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKRVVSGSRD-------ATLRVWDIETGQ 230 (445)
T ss_dssp -ETTEEEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTEEEEEETT-------SEEEEEESSSCC
T ss_pred -cCCEEEEEeCC-------CeEEEEECCcCcEEEE--ECCCCCcEEEEEecCCEEEEEeCC-------CEEEEEECCCCc
Confidence 34566666652 2688999888753221 111111122223345556666654 468899988765
Q ss_pred EEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCc
Q 017349 208 WTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDC 287 (373)
Q Consensus 208 W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~ 287 (373)
-... +........++..++..++.|+.+ ..+..||..+++-...-. .... .-.++..++..++.|+. ..
T Consensus 231 ~~~~--~~~~~~~v~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~-~~~~-~v~~~~~~~~~l~~~~~-d~ 299 (445)
T 2ovr_B 231 CLHV--LMGHVAAVRCVQYDGRRVVSGAYD------FMVKVWDPETETCLHTLQ-GHTN-RVYSLQFDGIHVVSGSL-DT 299 (445)
T ss_dssp EEEE--EECCSSCEEEEEECSSCEEEEETT------SCEEEEEGGGTEEEEEEC-CCSS-CEEEEEECSSEEEEEET-TS
T ss_pred EEEE--EcCCcccEEEEEECCCEEEEEcCC------CEEEEEECCCCcEeEEec-CCCC-ceEEEEECCCEEEEEeC-CC
Confidence 3221 111112222334477777777765 578999988765322111 1111 11234457777777765 66
Q ss_pred ceEEEeCCCCce
Q 017349 288 PMKQYNPDDDTW 299 (373)
Q Consensus 288 ~~~~yd~~~~~W 299 (373)
.+..||..+++-
T Consensus 300 ~i~i~d~~~~~~ 311 (445)
T 2ovr_B 300 SIRVWDVETGNC 311 (445)
T ss_dssp CEEEEETTTCCE
T ss_pred eEEEEECCCCCE
Confidence 899999987653
No 20
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.02 E-value=7.3e-08 Score=89.95 Aligned_cols=43 Identities=28% Similarity=0.328 Sum_probs=38.9
Q ss_pred CCCCCCCChHHHHHhhccCCccchhhhhhhcHhHHhhccC-chh
Q 017349 24 QPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITD-PGF 66 (373)
Q Consensus 24 ~~~~~~LP~dl~~~il~rlp~~~l~~~~~v~k~W~~l~~~-~~~ 66 (373)
.+.+..||+|++.+||++|+.++|.++..|||+|+.++.+ +.+
T Consensus 12 ~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~ 55 (464)
T 3v7d_B 12 RDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSL 55 (464)
T ss_dssp CCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHH
T ss_pred cCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 4668889999999999999999999999999999999887 543
No 21
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.01 E-value=3.9e-08 Score=91.22 Aligned_cols=265 Identities=12% Similarity=0.078 Sum_probs=143.9
Q ss_pred CCCCCCCChH----HHHHhhccCCccchhhhhhhcHhHHhhccCchhhHhhhh---------------------------
Q 017349 24 QPLIPGLPDE----IGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALCKKS--------------------------- 72 (373)
Q Consensus 24 ~~~~~~LP~d----l~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~~~~~~~~--------------------------- 72 (373)
.+.+..||+| |+..||++|+..+|.++..|||+|+.++.++.+.+....
T Consensus 8 ~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 87 (435)
T 1p22_A 8 RDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKP 87 (435)
T ss_dssp CCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC----
T ss_pred cChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCC
Confidence 4567889999 999999999999999999999999988766543221000
Q ss_pred ------------------------cc-----------------CC---------CCEEEEEEecCCCCceeEEEeeCCCC
Q 017349 73 ------------------------LS-----------------LS---------LPYLFIFSFHKPTARIQWQALDPRSG 102 (373)
Q Consensus 73 ------------------------~~-----------------~~---------~~~l~~~gg~~~~~~~~~~~~d~~~~ 102 (373)
+. .. ++..++.|+. ...+.+||..+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~----dg~i~iwd~~~~ 163 (435)
T 1p22_A 88 PDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLR----DNTIKIWDKNTL 163 (435)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEES----SSCEEEEESSSC
T ss_pred CCCCCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeC----CCeEEEEeCCCC
Confidence 00 00 0111222221 224667777665
Q ss_pred CeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEE
Q 017349 103 RWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIM 182 (373)
Q Consensus 103 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy 182 (373)
+-... +.... ....+... ++.+++.|+.+ ..+.+||..+++-... +...........+++..+
T Consensus 164 ~~~~~--~~~h~----~~v~~l~~--~~~~l~sg~~d-------g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l 226 (435)
T 1p22_A 164 ECKRI--LTGHT----GSVLCLQY--DERVIITGSSD-------STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMM 226 (435)
T ss_dssp CEEEE--ECCCS----SCEEEEEC--CSSEEEEEETT-------SCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEE
T ss_pred eEEEE--EcCCC----CcEEEEEE--CCCEEEEEcCC-------CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEE
Confidence 54332 11000 12222222 67777777652 2688999888754321 111112222333455566
Q ss_pred EEcCCCCCCCCcCceEEEEeCCCCeEEec-cCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeeccc
Q 017349 183 AVGGTGANINETMTAVECYDPESDTWTTA-AKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD 261 (373)
Q Consensus 183 v~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~ 261 (373)
+.|+.+ ..+.+||..+..-... ..+........++..++..++.|+.+ ..+.+||..+++-...-.
T Consensus 227 ~s~s~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 227 VTCSKD-------RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD------RTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp EEEETT-------SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT------SEEEEEETTTCCEEEEEE
T ss_pred EEeeCC-------CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC------CeEEEEECCcCcEEEEEc
Confidence 666664 3588898877642111 11111111222333466666677655 578999998875322111
Q ss_pred CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEEEEEeCC
Q 017349 262 GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSG 331 (373)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG~ 331 (373)
.... .-.++..++.+++.|+. ...+..||..+++-... +... ......+..++..++.|+.
T Consensus 294 ~~~~--~v~~~~~~~~~l~~g~~-dg~i~iwd~~~~~~~~~--~~~h----~~~v~~~~~~~~~l~sg~~ 354 (435)
T 1p22_A 294 GHKR--GIACLQYRDRLVVSGSS-DNTIRLWDIECGACLRV--LEGH----EELVRCIRFDNKRIVSGAY 354 (435)
T ss_dssp CCSS--CEEEEEEETTEEEEEET-TSCEEEEETTTCCEEEE--ECCC----SSCEEEEECCSSEEEEEET
T ss_pred CCCC--cEEEEEeCCCEEEEEeC-CCeEEEEECCCCCEEEE--EeCC----cCcEEEEEecCCEEEEEeC
Confidence 1111 11234456777777765 66899999987643321 1111 1223334447777777764
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.81 E-value=3.4e-09 Score=66.86 Aligned_cols=45 Identities=20% Similarity=0.174 Sum_probs=39.4
Q ss_pred CCCCCCCCChHHHHHhhccCCccchhhhhhhcHhHHhhccCchhh
Q 017349 23 TQPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFA 67 (373)
Q Consensus 23 ~~~~~~~LP~dl~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~~~ 67 (373)
+...+..||+|++.+||.+||..++.+++.|||+|+.++.++.+.
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW 49 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHH
Confidence 356789999999999999999999999999999999999998875
No 23
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.71 E-value=4.1e-06 Score=70.24 Aligned_cols=192 Identities=12% Similarity=0.012 Sum_probs=119.7
Q ss_pred CceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceE
Q 017349 119 QAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAV 198 (373)
Q Consensus 119 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (373)
..|.......++.+|+..|.. ..+.+.++|+.+++=...-+++..-...+++..+++||+....+ +.+
T Consensus 20 ~~ftqGL~~~~~~LyestG~~-----g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-------~~v 87 (243)
T 3mbr_X 20 TAFTEGLFYLRGHLYESTGET-----GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-------HEG 87 (243)
T ss_dssp TCCEEEEEEETTEEEEEECCT-----TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-------SEE
T ss_pred ccccccEEEECCEEEEECCCC-----CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-------CEE
Confidence 445443333389999998863 34589999999997655445554455567788899999986543 679
Q ss_pred EEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCcee-eccc---CccCCcceEEEEE
Q 017349 199 ECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWN-LMSD---GMKEGWTGISIVL 274 (373)
Q Consensus 199 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~-~~~~---~~~~~~~~~~~~~ 274 (373)
++||+.+.+-. ..++.+....+.+.-+++||+.-| . +.+..+|+++.+-. .+.. +.+..........
T Consensus 88 ~v~D~~tl~~~--~ti~~~~~Gwglt~dg~~L~vSdg-s------~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~ 158 (243)
T 3mbr_X 88 FVYDLATLTPR--ARFRYPGEGWALTSDDSHLYMSDG-T------AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV 158 (243)
T ss_dssp EEEETTTTEEE--EEEECSSCCCEEEECSSCEEEECS-S------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEECCcCcEE--EEEeCCCCceEEeeCCCEEEEECC-C------CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe
Confidence 99999887532 233333344555555677888765 2 57999999987643 2221 1111222222345
Q ss_pred CCeEEEEeeCCCcceEEEeCCCCcee---eecCCCCCC-----cccccceEEEEe--CCEEEEEeCCc
Q 017349 275 EGKLFVISEHGDCPMKQYNPDDDTWR---YVGGDKFPC-----EVMHRPFAVNGV--EGKIYVVSSGL 332 (373)
Q Consensus 275 ~~~l~v~gg~~~~~~~~yd~~~~~W~---~~~~~~~~~-----~~~~~~~~~~~~--~~~l~i~GG~~ 332 (373)
+|+||+-- ...+.+.+.|+++++-. .+..+.... +......+++.. +++|||.|-..
T Consensus 159 ~G~lyanv-w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w 225 (243)
T 3mbr_X 159 NGELLANV-WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW 225 (243)
T ss_dssp TTEEEEEE-TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC
T ss_pred CCEEEEEE-CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC
Confidence 99999543 34679999999988543 333221100 011223555544 68999999864
No 24
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.59 E-value=2e-08 Score=86.43 Aligned_cols=47 Identities=19% Similarity=0.282 Sum_probs=43.3
Q ss_pred CCCCCCCChHHHHHhhccCCccchh-hhhhhcHhHHhhccCchhhHhh
Q 017349 24 QPLIPGLPDEIGELCLLHVPYPYQA-LVRSVSYSWNKAITDPGFALCK 70 (373)
Q Consensus 24 ~~~~~~LP~dl~~~il~rlp~~~l~-~~~~v~k~W~~l~~~~~~~~~~ 70 (373)
+..+..||+||+++||++||.++|. ++++|||+|+.|+.++.|.+.+
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~ 95 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLK 95 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHH
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHH
Confidence 5678899999999999999999999 9999999999999999986543
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.59 E-value=5.5e-05 Score=67.16 Aligned_cols=207 Identities=11% Similarity=-0.047 Sum_probs=121.0
Q ss_pred CceeEEEeeCCCCCeeeCC-----CCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCce-eccC
Q 017349 90 ARIQWQALDPRSGRWFVLP-----PMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQW-QLAS 163 (373)
Q Consensus 90 ~~~~~~~~d~~~~~W~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W-~~~~ 163 (373)
....+.++|+.++++...- ..+.. ....+.+.. ++++|+.... .+.+.++|+.+.+- .+++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg----~~~~~i~~~--~~~lyv~~~~-------~~~v~viD~~t~~~~~~i~ 81 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLG----DVAQSMVIR--DGIGWIVVNN-------SHVIFAIDINTFKEVGRIT 81 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCB----SCEEEEEEE--TTEEEEEEGG-------GTEEEEEETTTCCEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccC----ccceEEEEE--CCEEEEEEcC-------CCEEEEEECcccEEEEEcC
Confidence 3566889999998875421 11111 122344444 8999998643 34799999998875 3343
Q ss_pred CCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccc----cccccEEEECCEEEEEeC-cc
Q 017349 164 PMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMG----LARYDSAVMGSKMYVTEG-WT 237 (373)
Q Consensus 164 ~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----~~~~~~~~~~~~lyv~gG-~~ 237 (373)
.... ...++. -++++|+....+ ..+.++|+.+++-...-+.... ......+..++++|+..- ..
T Consensus 82 ~~~~---p~~i~~~~~g~lyv~~~~~-------~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~ 151 (328)
T 3dsm_A 82 GFTS---PRYIHFLSDEKAYVTQIWD-------YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQ 151 (328)
T ss_dssp CCSS---EEEEEEEETTEEEEEEBSC-------SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTC
T ss_pred CCCC---CcEEEEeCCCeEEEEECCC-------CeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCC
Confidence 3222 233444 678999986432 4699999999875422111110 022334457889999853 22
Q ss_pred CCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCC---------CcceEEEeCCCCceeeecCCCCC
Q 017349 238 WPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHG---------DCPMKQYNPDDDTWRYVGGDKFP 308 (373)
Q Consensus 238 ~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~---------~~~~~~yd~~~~~W~~~~~~~~~ 308 (373)
+.+.++|+++++....-. ....-......-+|++|+..... ...+.++|+++++....-.++..
T Consensus 152 ------~~v~viD~~t~~~~~~i~-~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g 224 (328)
T 3dsm_A 152 ------NRILKIDTETDKVVDELT-IGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG 224 (328)
T ss_dssp ------CEEEEEETTTTEEEEEEE-CSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT
T ss_pred ------CEEEEEECCCCeEEEEEE-cCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC
Confidence 579999999987643221 11111222233468888876432 25799999998876532222211
Q ss_pred CcccccceEEEEe--CCEEEEEeC
Q 017349 309 CEVMHRPFAVNGV--EGKIYVVSS 330 (373)
Q Consensus 309 ~~~~~~~~~~~~~--~~~l~i~GG 330 (373)
....+++.. ++.||+..+
T Consensus 225 ----~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 225 ----DWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp ----CCCEEEEECTTSCEEEEESS
T ss_pred ----CCceeEEEecCCCEEEEEcc
Confidence 234555554 577888765
No 26
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.47 E-value=1.8e-05 Score=66.97 Aligned_cols=192 Identities=9% Similarity=-0.018 Sum_probs=116.9
Q ss_pred CceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceE
Q 017349 119 QAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAV 198 (373)
Q Consensus 119 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (373)
..|+......++.+|+..|.. ..+.+.++|+.+++=...-+++..-...+++..+++||+....+ +.+
T Consensus 42 ~~ftqGL~~~~~~LyestG~~-----g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-------~~v 109 (262)
T 3nol_A 42 KAFTEGFFYRNGYFYESTGLN-----GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-------GLG 109 (262)
T ss_dssp TCEEEEEEEETTEEEEEEEET-----TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-------SEE
T ss_pred CcccceEEEECCEEEEECCCC-----CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-------CEE
Confidence 344444333389999998863 34589999999997554334443334456778899999986543 579
Q ss_pred EEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCcee-ecccC---ccCCcceEEEEE
Q 017349 199 ECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWN-LMSDG---MKEGWTGISIVL 274 (373)
Q Consensus 199 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~-~~~~~---~~~~~~~~~~~~ 274 (373)
.+||+++.+-. ..++.+..+.+.+.-+++||+.-| . +.+..+|+++.+-. .+... .+....+.....
T Consensus 110 ~v~D~~t~~~~--~ti~~~~eG~glt~dg~~L~~SdG-s------~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 110 FVWNIRNLRQV--RSFNYDGEGWGLTHNDQYLIMSDG-T------PVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp EEEETTTCCEE--EEEECSSCCCCEEECSSCEEECCS-S------SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEECccCcEE--EEEECCCCceEEecCCCEEEEECC-C------CeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 99999987642 223333344555555667887655 2 57999999987643 22221 111111122344
Q ss_pred CCeEEEEeeCCCcceEEEeCCCCceeeecCCC-CCC------cccccceEEEEe--CCEEEEEeCCc
Q 017349 275 EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDK-FPC------EVMHRPFAVNGV--EGKIYVVSSGL 332 (373)
Q Consensus 275 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~-~~~------~~~~~~~~~~~~--~~~l~i~GG~~ 332 (373)
+|+||+-- ...+.|.+.|+++++-...-.++ +.. +......+++.. +++|||.|-..
T Consensus 181 ~G~lyan~-w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 181 DGEIFANV-WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp TTEEEEEE-TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred CCEEEEEE-ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 99999643 34679999999988644322211 110 001223555554 58899999864
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.42 E-value=0.00032 Score=62.12 Aligned_cols=220 Identities=12% Similarity=-0.031 Sum_probs=124.1
Q ss_pred CCCCEEEEEEecCCCCceeEEEeeCCCCCe-eeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEe
Q 017349 75 LSLPYLFIFSFHKPTARIQWQALDPRSGRW-FVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYR 153 (373)
Q Consensus 75 ~~~~~l~~~gg~~~~~~~~~~~~d~~~~~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd 153 (373)
..++.+|+... ....+.++|+.+.+. ..++... ...+.+... ++++|+.... .+.+.++|
T Consensus 51 ~~~~~lyv~~~----~~~~v~viD~~t~~~~~~i~~~~-------~p~~i~~~~-~g~lyv~~~~-------~~~v~~iD 111 (328)
T 3dsm_A 51 IRDGIGWIVVN----NSHVIFAIDINTFKEVGRITGFT-------SPRYIHFLS-DEKAYVTQIW-------DYRIFIIN 111 (328)
T ss_dssp EETTEEEEEEG----GGTEEEEEETTTCCEEEEEECCS-------SEEEEEEEE-TTEEEEEEBS-------CSEEEEEE
T ss_pred EECCEEEEEEc----CCCEEEEEECcccEEEEEcCCCC-------CCcEEEEeC-CCeEEEEECC-------CCeEEEEE
Confidence 34678888753 235688999998876 3343222 223444422 7899998632 24799999
Q ss_pred CCCCceeccCCCCC----cceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEE-ECC
Q 017349 154 ATTNQWQLASPMLT----PRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAV-MGS 228 (373)
Q Consensus 154 ~~t~~W~~~~~~~~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~ 228 (373)
+.+++-...-+... ......++..++++|+..-. ....+.++|+.+++....-+ ........+. -+|
T Consensus 112 ~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~------~~~~v~viD~~t~~~~~~i~--~g~~p~~i~~~~dG 183 (328)
T 3dsm_A 112 PKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS------YQNRILKIDTETDKVVDELT--IGIQPTSLVMDKYN 183 (328)
T ss_dssp TTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT------TCCEEEEEETTTTEEEEEEE--CSSCBCCCEECTTS
T ss_pred CCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC------CCCEEEEEECCCCeEEEEEE--cCCCccceEEcCCC
Confidence 99986442111111 00223444578999998421 12479999999987543211 1111122333 368
Q ss_pred EEEEEeCccCCCc----cCCceEEEeCCCCceeecccCccCCcceEE-EEE--CCeEEEEeeCCCcceEEEeCCCCceee
Q 017349 229 KMYVTEGWTWPFM----FSPRGGVYDINKDTWNLMSDGMKEGWTGIS-IVL--EGKLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 229 ~lyv~gG~~~~~~----~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
++|+......... ....+.++|+++++....-. .+.+..... +.. ++.||+..+ .+++||+++++...
T Consensus 184 ~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~-~~~g~~p~~la~~~d~~~lyv~~~----~v~~~d~~t~~~~~ 258 (328)
T 3dsm_A 184 KMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK-FKLGDWPSEVQLNGTRDTLYWINN----DIWRMPVEADRVPV 258 (328)
T ss_dssp EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE-CCTTCCCEEEEECTTSCEEEEESS----SEEEEETTCSSCCS
T ss_pred CEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe-cCCCCCceeEEEecCCCEEEEEcc----EEEEEECCCCceee
Confidence 9888764221110 12579999999887653221 221111222 333 466777654 89999998876532
Q ss_pred ecCCCCCCcccccceEEEE--eCCEEEEEe
Q 017349 302 VGGDKFPCEVMHRPFAVNG--VEGKIYVVS 329 (373)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~--~~~~l~i~G 329 (373)
....+.. .....+++. .+++||+..
T Consensus 259 ~~~~~~~---~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 259 RPFLEFR---DTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp SCSBCCC---SSCEEEEEECTTTCCEEEEE
T ss_pred eeeecCC---CCceEEEEEcCCCCeEEEEc
Confidence 2211110 133455655 378999997
No 28
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.28 E-value=0.00029 Score=59.61 Aligned_cols=189 Identities=10% Similarity=-0.012 Sum_probs=115.0
Q ss_pred CceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceE
Q 017349 119 QAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAV 198 (373)
Q Consensus 119 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (373)
..|+......++.||+..|..+ .+.++|+.+++-...- ++..-...+++..+++||+....+ +.+
T Consensus 54 ~~ftqGL~~~~~~Ly~stG~~g-------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-------~~v 118 (268)
T 3nok_A 54 NAFTQGLVFHQGHFFESTGHQG-------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-------GLL 118 (268)
T ss_dssp TCCEEEEEEETTEEEEEETTTT-------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-------CEE
T ss_pred ccccceEEEECCEEEEEcCCCC-------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-------CEE
Confidence 3444443334899999988621 3899999998654322 443334456777899999986543 579
Q ss_pred EEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceee-ccc---CccCCcceEEEEE
Q 017349 199 ECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-MSD---GMKEGWTGISIVL 274 (373)
Q Consensus 199 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-~~~---~~~~~~~~~~~~~ 274 (373)
++||+++.+-. ..++.+....+.+.-+++||+.-| . +.+..+|+++.+-.. +.. +.+..........
T Consensus 119 ~V~D~~Tl~~~--~ti~~~~eGwGLt~Dg~~L~vSdG-s------~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~ 189 (268)
T 3nok_A 119 FTWSGMPPQRE--RTTRYSGEGWGLCYWNGKLVRSDG-G------TMLTFHEPDGFALVGAVQVKLRGQPVELINELECA 189 (268)
T ss_dssp EEEETTTTEEE--EEEECSSCCCCEEEETTEEEEECS-S------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred EEEECCcCcEE--EEEeCCCceeEEecCCCEEEEECC-C------CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe
Confidence 99999987643 222333344566666788998865 2 589999999876432 221 1111111222344
Q ss_pred CCeEEEEeeCCCcceEEEeCCCCcee---eecCCC--C---CCcccccceEEEEe--CCEEEEEeCCc
Q 017349 275 EGKLFVISEHGDCPMKQYNPDDDTWR---YVGGDK--F---PCEVMHRPFAVNGV--EGKIYVVSSGL 332 (373)
Q Consensus 275 ~~~l~v~gg~~~~~~~~yd~~~~~W~---~~~~~~--~---~~~~~~~~~~~~~~--~~~l~i~GG~~ 332 (373)
+|+||+- -...+.|.+.|+++++-. .+..+. . .........+++.. +++|||.|-..
T Consensus 190 dG~lyan-vw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~W 256 (268)
T 3nok_A 190 NGVIYAN-IWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLW 256 (268)
T ss_dssp TTEEEEE-ETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTC
T ss_pred CCEEEEE-ECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCC
Confidence 9999954 344679999999988543 332110 0 00011223555544 57899999864
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.12 E-value=0.0043 Score=55.70 Aligned_cols=232 Identities=13% Similarity=0.165 Sum_probs=129.5
Q ss_pred CCCCEEEEEEecCCCCceeEEEeeCCCCC--eeeCCCCCCC-CCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEE
Q 017349 75 LSLPYLFIFSFHKPTARIQWQALDPRSGR--WFVLPPMPCP-KAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIM 151 (373)
Q Consensus 75 ~~~~~l~~~gg~~~~~~~~~~~~d~~~~~--W~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~ 151 (373)
..++.+|+... ...+++||+.+.+ |..-...... ...............++.||+... ...++.
T Consensus 51 v~~~~v~~~~~-----~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------~g~l~a 117 (376)
T 3q7m_A 51 LADNVVYAADR-----AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--------KAQVYA 117 (376)
T ss_dssp EETTEEEEECT-----TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET--------TSEEEE
T ss_pred EECCEEEEEcC-----CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC--------CCEEEE
Confidence 34778887632 2368899987765 6543221100 000012222333333889998643 137999
Q ss_pred EeCCCCc--eeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCcc--ccccccEEE
Q 017349 152 YRATTNQ--WQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRM--GLARYDSAV 225 (373)
Q Consensus 152 yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~--~~~~~~~~~ 225 (373)
+|..+++ |+.-..-. .....+..++.+|+.... ..++.||+.+++ |+.-...+. .+.....+.
T Consensus 118 ~d~~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~~--------g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~ 186 (376)
T 3q7m_A 118 LNTSDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTSN--------GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT 186 (376)
T ss_dssp EETTTCCEEEEEECSSC---CCSCCEEETTEEEEECTT--------SEEEEEETTTCCEEEEEECCC-----CCCCCCEE
T ss_pred EECCCCCEEEEEeCCCc---eEcCCEEECCEEEEEcCC--------CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE
Confidence 9998874 76532211 122234557888775432 369999998875 876432221 112233455
Q ss_pred ECCEEEEEeCccCCCccCCceEEEeCCCCc--eeecccCccCC---------cceEEEEECCeEEEEeeCCCcceEEEeC
Q 017349 226 MGSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKEG---------WTGISIVLEGKLFVISEHGDCPMKQYNP 294 (373)
Q Consensus 226 ~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~---------~~~~~~~~~~~l~v~gg~~~~~~~~yd~ 294 (373)
.++.+|+. ..+ ..+.++|+.+++ |+.-.. .+.. .....++.++.+|+.+. ...+..+|+
T Consensus 187 ~~~~v~~g-~~~------g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~--~g~l~~~d~ 256 (376)
T 3q7m_A 187 AFGAAVVG-GDN------GRVSAVLMEQGQMIWQQRIS-QATGSTEIDRLSDVDTTPVVVNGVVFALAY--NGNLTALDL 256 (376)
T ss_dssp ETTEEEEC-CTT------TEEEEEETTTCCEEEEEECC-C-----------CCCCCCEEETTEEEEECT--TSCEEEEET
T ss_pred ECCEEEEE-cCC------CEEEEEECCCCcEEEEEecc-cCCCCcccccccccCCCcEEECCEEEEEec--CcEEEEEEC
Confidence 68887763 222 468999998774 765322 1111 11222567888888753 448999999
Q ss_pred CCC--ceeeecCCCCCCcccccceEEEEeCCEEEEEeCCceeeeeEEEEeecCCcccceEEe
Q 017349 295 DDD--TWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSGLNVAIGRVYEEQNGGISAEWKVM 354 (373)
Q Consensus 295 ~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~W~~~ 354 (373)
+++ .|+.- .+ .....+..++.||+.... +.++....+..+..|+.-
T Consensus 257 ~tG~~~w~~~----~~-----~~~~~~~~~~~l~~~~~~-----g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 257 RSGQIMWKRE----LG-----SVNDFIVDGNRIYLVDQN-----DRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp TTCCEEEEEC----CC-----CEEEEEEETTEEEEEETT-----CCEEEEETTTCCEEEEEC
T ss_pred CCCcEEeecc----CC-----CCCCceEECCEEEEEcCC-----CeEEEEECCCCcEEEeec
Confidence 876 46542 22 124456678999988642 234443345566778753
No 30
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.10 E-value=0.0046 Score=55.50 Aligned_cols=224 Identities=14% Similarity=0.107 Sum_probs=126.7
Q ss_pred CCCCEEEEEEecCCCCceeEEEeeCCCCC--eeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEE
Q 017349 75 LSLPYLFIFSFHKPTARIQWQALDPRSGR--WFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMY 152 (373)
Q Consensus 75 ~~~~~l~~~gg~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~y 152 (373)
..++.+|+... ...++++|+.+.+ |..-..-. .....++. ++.||+... ...++.+
T Consensus 101 ~~~~~v~v~~~-----~g~l~a~d~~tG~~~W~~~~~~~-------~~~~p~~~--~~~v~v~~~--------~g~l~~~ 158 (376)
T 3q7m_A 101 VSGGHVYIGSE-----KAQVYALNTSDGTVAWQTKVAGE-------ALSRPVVS--DGLVLIHTS--------NGQLQAL 158 (376)
T ss_dssp EETTEEEEEET-----TSEEEEEETTTCCEEEEEECSSC-------CCSCCEEE--TTEEEEECT--------TSEEEEE
T ss_pred EeCCEEEEEcC-----CCEEEEEECCCCCEEEEEeCCCc-------eEcCCEEE--CCEEEEEcC--------CCeEEEE
Confidence 34667777532 2468899998776 65432211 00111222 788887543 2279999
Q ss_pred eCCCCc--eeccCCCCC--cceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCcccc--------
Q 017349 153 RATTNQ--WQLASPMLT--PRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRMGL-------- 218 (373)
Q Consensus 153 d~~t~~--W~~~~~~~~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~-------- 218 (373)
|+.+++ |+.-...+. .+...+.+..++.+|+ |..+ ..+..||+.+++ |+.-...+...
T Consensus 159 d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~-g~~~-------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~ 230 (376)
T 3q7m_A 159 NEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVV-GGDN-------GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSD 230 (376)
T ss_dssp ETTTCCEEEEEECCC-----CCCCCCEEETTEEEE-CCTT-------TEEEEEETTTCCEEEEEECCC-----------C
T ss_pred ECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEE-EcCC-------CEEEEEECCCCcEEEEEecccCCCCcccccccc
Confidence 998885 775432221 1222344455777776 3222 358999998774 76543322111
Q ss_pred ccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCc--eeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCC
Q 017349 219 ARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 219 ~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~ 296 (373)
.....+..++.+|+.+. . ..+.++|+.+++ |+.-.. .....++.++.||+... ...+..||+++
T Consensus 231 ~~~~p~~~~~~v~~~~~-~------g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~l~~~~~--~g~l~~~d~~t 296 (376)
T 3q7m_A 231 VDTTPVVVNGVVFALAY-N------GNLTALDLRSGQIMWKRELG-----SVNDFIVDGNRIYLVDQ--NDRVMALTIDG 296 (376)
T ss_dssp CCCCCEEETTEEEEECT-T------SCEEEEETTTCCEEEEECCC-----CEEEEEEETTEEEEEET--TCCEEEEETTT
T ss_pred cCCCcEEECCEEEEEec-C------cEEEEEECCCCcEEeeccCC-----CCCCceEECCEEEEEcC--CCeEEEEECCC
Confidence 12334556888887653 2 468999998774 765321 11223567899998765 34899999987
Q ss_pred Cc--eeeecCCCCCCcccccceEEEEeCCEEEEEeCCceeeeeEEEEeecCCcccceEE
Q 017349 297 DT--WRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSGLNVAIGRVYEEQNGGISAEWKV 353 (373)
Q Consensus 297 ~~--W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~W~~ 353 (373)
++ |+.-. ++. ....+.+..++.||+.... +.++.+..+..+..|+.
T Consensus 297 G~~~w~~~~-~~~-----~~~~~~~~~~~~l~v~~~~-----g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 297 GVTLWTQSD-LLH-----RLLTSPVLYNGNLVVGDSE-----GYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp CCEEEEECT-TTT-----SCCCCCEEETTEEEEECTT-----SEEEEEETTTCCEEEEE
T ss_pred CcEEEeecc-cCC-----CcccCCEEECCEEEEEeCC-----CeEEEEECCCCcEEEEE
Confidence 74 65431 111 1223345568888876532 34555444556667774
No 31
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.00 E-value=0.0019 Score=55.05 Aligned_cols=190 Identities=12% Similarity=-0.078 Sum_probs=110.2
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEE
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVEC 200 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 200 (373)
+|.+.. .++.+|+..|.. ..+.+.++|+.+++-...-+++......+++..++++|+..-. .+.+.+
T Consensus 24 ~Gl~~~-~dg~Lyvstg~~-----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-------~~~v~v 90 (266)
T 2iwa_A 24 QGLVYA-ENDTLFESTGLY-----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-------KNIGFI 90 (266)
T ss_dssp EEEEEC-STTEEEEEECST-----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-------CSEEEE
T ss_pred ccEEEe-CCCeEEEECCCC-----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-------CCEEEE
Confidence 455544 248999987742 2458999999999754433333333445667778999998643 357999
Q ss_pred EeCCCCeEEeccCCccc-cccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCcee-ecccC---ccCCcceEEEEEC
Q 017349 201 YDPESDTWTTAAKLRMG-LARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWN-LMSDG---MKEGWTGISIVLE 275 (373)
Q Consensus 201 yd~~t~~W~~~~~~~~~-~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~-~~~~~---~~~~~~~~~~~~~ 275 (373)
||+.+.+= +..++.+ ....+.+.-++++|+.-| . +.+..+|+++.+-. .+... .+..........+
T Consensus 91 iD~~t~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g-s------~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~d 161 (266)
T 2iwa_A 91 YDRRTLSN--IKNFTHQMKDGWGLATDGKILYGSDG-T------SILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYIN 161 (266)
T ss_dssp EETTTTEE--EEEEECCSSSCCEEEECSSSEEEECS-S------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EECCCCcE--EEEEECCCCCeEEEEECCCEEEEECC-C------CeEEEEECCCCcEEEEEEECCCCcccccceeEEEEC
Confidence 99998753 2223322 222333333567887654 2 68999999887632 22211 1111112223348
Q ss_pred CeEEEEeeCCCcceEEEeCCCCceeeecCCC-C-------CCcccccceEEEEe--CCEEEEEeCCce
Q 017349 276 GKLFVISEHGDCPMKQYNPDDDTWRYVGGDK-F-------PCEVMHRPFAVNGV--EGKIYVVSSGLN 333 (373)
Q Consensus 276 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~-~-------~~~~~~~~~~~~~~--~~~l~i~GG~~~ 333 (373)
++||+--. ..+.+.+.|+++++-...-.++ . ..+......+++.. ++++||.|+..+
T Consensus 162 g~lyvn~~-~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 162 GEVWANIW-QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp TEEEEEET-TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred CEEEEecC-CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 99997643 3679999999887533221111 0 00001123565554 568999998643
No 32
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.92 E-value=0.0008 Score=60.68 Aligned_cols=188 Identities=14% Similarity=0.152 Sum_probs=99.7
Q ss_pred CEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC
Q 017349 78 PYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN 157 (373)
Q Consensus 78 ~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~ 157 (373)
+.+|+.++. ...+.++|..+++....-... . ...+.+....+..||+.++.+ ..+.+||..++
T Consensus 2 ~~l~vs~~~----d~~v~v~d~~~~~~~~~~~~~--~----~~~~~~~s~dg~~l~~~~~~d-------~~i~v~d~~~~ 64 (391)
T 1l0q_A 2 TFAYIANSE----SDNISVIDVTSNKVTATIPVG--S----NPMGAVISPDGTKVYVANAHS-------NDVSIIDTATN 64 (391)
T ss_dssp EEEEEEETT----TTEEEEEETTTTEEEEEEECS--S----SEEEEEECTTSSEEEEEEGGG-------TEEEEEETTTT
T ss_pred CEEEEEcCC----CCEEEEEECCCCeEEEEeecC--C----CcceEEECCCCCEEEEECCCC-------CeEEEEECCCC
Confidence 345665532 345888998887554322211 1 122333333344677776542 37999999888
Q ss_pred ceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CC-EEEEE
Q 017349 158 QWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GS-KMYVT 233 (373)
Q Consensus 158 ~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~-~lyv~ 233 (373)
+....-..+. ....++.. +..||+.+..+ ..+.+||..+++-...-. ........+.. ++ .+|+.
T Consensus 65 ~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~-------~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~ 133 (391)
T 1l0q_A 65 NVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS-------STLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVT 133 (391)
T ss_dssp EEEEEEECSS--SEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEE
T ss_pred eEEEEEECCC--CccceEECCCCCEEEEEECCC-------CEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEE
Confidence 6543322222 22223332 34566665432 469999999887543322 11111223332 44 47677
Q ss_pred eCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECC-eEEEEeeCCCcceEEEeCCCCceee
Q 017349 234 EGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEG-KLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 234 gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
++.+ ..+.+||+.+++....-. ........+..-++ .||+.++ ....+.+||+.+++...
T Consensus 134 ~~~~------~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~-~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 134 NNGD------KTVSVINTVTKAVINTVS-VGRSPKGIAVTPDGTKVYVANF-DSMSISVIDTVTNSVID 194 (391)
T ss_dssp ETTT------TEEEEEETTTTEEEEEEE-CCSSEEEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEE
T ss_pred eCCC------CEEEEEECCCCcEEEEEe-cCCCcceEEECCCCCEEEEEeC-CCCEEEEEECCCCeEEE
Confidence 6654 579999998887543322 11111111122244 4555544 35689999998775443
No 33
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.90 E-value=0.0056 Score=51.88 Aligned_cols=214 Identities=15% Similarity=0.061 Sum_probs=109.0
Q ss_pred CCEEEE-EEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC
Q 017349 77 LPYLFI-FSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT 155 (373)
Q Consensus 77 ~~~l~~-~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~ 155 (373)
++.+|+ .. .....+.+||+.+........... ..-.+.+... ++.+|+... ...+++||+.
T Consensus 34 ~g~l~v~~~----~~~~~i~~~~~~~~~~~~~~~~~~-----~~p~~i~~~~-~g~l~v~~~--------~~~i~~~d~~ 95 (270)
T 1rwi_B 34 AGNVYVTSE----GMYGRVVKLATGSTGTTVLPFNGL-----YQPQGLAVDG-AGTVYVTDF--------NNRVVTLAAG 95 (270)
T ss_dssp TCCEEEEEC----SSSCEEEEECC-----EECCCCSC-----CSCCCEEECT-TCCEEEEET--------TTEEEEECTT
T ss_pred CCCEEEEcc----CCCCcEEEecCCCcccceEeeCCc-----CCcceeEECC-CCCEEEEcC--------CCEEEEEeCC
Confidence 445776 42 223457788887766554432110 0223344333 677888754 1268999998
Q ss_pred CCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCEEEEE
Q 017349 156 TNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVT 233 (373)
Q Consensus 156 t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~ 233 (373)
++....+.... ......++.. ++++|+..... ..+.+|+..+........... ..-...+.. +|++|+.
T Consensus 96 ~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~-------~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 96 SNNQTVLPFDG-LNYPEGLAVDTQGAVYVADRGN-------NRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp CSCCEECCCCS-CSSEEEEEECTTCCEEEEEGGG-------TEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEE
T ss_pred CceEeeeecCC-cCCCcceEECCCCCEEEEECCC-------CEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEE
Confidence 87654433211 1122333333 67888875332 357888776655433221110 111223333 5788887
Q ss_pred eCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcc
Q 017349 234 EGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEV 311 (373)
Q Consensus 234 gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~ 311 (373)
.... ..+.+||+.+..-..... ... .....+.+ +|.||+.... ...+.+||+....-.... .. .
T Consensus 167 ~~~~------~~i~~~~~~~~~~~~~~~-~~~-~~p~~i~~d~~g~l~v~~~~-~~~v~~~~~~~~~~~~~~---~~--~ 232 (270)
T 1rwi_B 167 DTDN------NRVVKLEAESNNQVVLPF-TDI-TAPWGIAVDEAGTVYVTEHN-TNQVVKLLAGSTTSTVLP---FT--G 232 (270)
T ss_dssp EGGG------TEEEEECTTTCCEEECCC-SSC-CSEEEEEECTTCCEEEEETT-TSCEEEECTTCSCCEECC---CC--S
T ss_pred ECCC------CEEEEEecCCCceEeecc-cCC-CCceEEEECCCCCEEEEECC-CCcEEEEcCCCCcceeec---cC--C
Confidence 6543 578999998765433221 111 11122333 5688887643 558999999765433322 11 0
Q ss_pred cccceEEEE-eCCEEEEEeCC
Q 017349 312 MHRPFAVNG-VEGKIYVVSSG 331 (373)
Q Consensus 312 ~~~~~~~~~-~~~~l~i~GG~ 331 (373)
.....+++. -+|+||+....
T Consensus 233 ~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 233 LNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp CSCEEEEEECTTCCEEEEEGG
T ss_pred CCCceeEEECCCCCEEEEECC
Confidence 122344444 35788888763
No 34
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.89 E-value=0.001 Score=60.03 Aligned_cols=189 Identities=11% Similarity=0.062 Sum_probs=99.6
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT 155 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~ 155 (373)
.+..+|+.+.. ...+.++|..+++....-..+ . .-.+.+....++.||+.+.. ...+.+||+.
T Consensus 42 dg~~l~~~~~~----d~~i~v~d~~~~~~~~~~~~~--~----~v~~~~~spdg~~l~~~~~~-------~~~v~v~d~~ 104 (391)
T 1l0q_A 42 DGTKVYVANAH----SNDVSIIDTATNNVIATVPAG--S----SPQGVAVSPDGKQVYVTNMA-------SSTLSVIDTT 104 (391)
T ss_dssp TSSEEEEEEGG----GTEEEEEETTTTEEEEEEECS--S----SEEEEEECTTSSEEEEEETT-------TTEEEEEETT
T ss_pred CCCEEEEECCC----CCeEEEEECCCCeEEEEEECC--C----CccceEECCCCCEEEEEECC-------CCEEEEEECC
Confidence 35567776542 235888999887654432222 1 11223333324557666543 2379999999
Q ss_pred CCceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CC-EEE
Q 017349 156 TNQWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GS-KMY 231 (373)
Q Consensus 156 t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~-~ly 231 (373)
+++-...-.. ......++.. +..+|+.++.+ ..+.+||..+++....-... ......+.. ++ .||
T Consensus 105 ~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~ 173 (391)
T 1l0q_A 105 SNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD-------KTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVY 173 (391)
T ss_dssp TTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT-------TEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEE
T ss_pred CCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCC-------CEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEE
Confidence 8865433221 1222233332 34576776543 46999999988754432211 111222222 34 566
Q ss_pred EEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeC--CCcceEEEeCCCCce
Q 017349 232 VTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEH--GDCPMKQYNPDDDTW 299 (373)
Q Consensus 232 v~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~--~~~~~~~yd~~~~~W 299 (373)
+.++.+ ..+.+||+.+++-...-. ........+..-+++.+++++. ....+.+||+.+.+-
T Consensus 174 ~~~~~~------~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 174 VANFDS------MSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (391)
T ss_dssp EEETTT------TEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred EEeCCC------CEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeE
Confidence 666544 579999998876443221 1111111111224544444432 356899999987643
No 35
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.89 E-value=0.0091 Score=51.13 Aligned_cols=223 Identities=11% Similarity=0.107 Sum_probs=114.0
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.+|+.... ...+.+||+.......+............-.+.++...++.+|+.+.. ....+.+||+..
T Consensus 40 ~g~l~v~~~~----~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~------~~~~i~~~d~~g 109 (286)
T 1q7f_A 40 QNDIIVADTN----NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS------PTHQIQIYNQYG 109 (286)
T ss_dssp TCCEEEEEGG----GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG------GGCEEEEECTTS
T ss_pred CCCEEEEECC----CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC------CCCEEEEECCCC
Confidence 4457765432 335788998754444433211011011122344443358899998632 123689999655
Q ss_pred CceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEE
Q 017349 157 NQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVT 233 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~ 233 (373)
+.-..+.... ......++. -++++|+....+ ..+.+||+.......+... ..........+ +|++|+.
T Consensus 110 ~~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~-------~~i~~~~~~g~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 110 QFVRKFGATI-LQHPRGVTVDNKGRIIVVECKV-------MRVIIFDQNGNVLHKFGCS-KHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp CEEEEECTTT-CSCEEEEEECTTSCEEEEETTT-------TEEEEECTTSCEEEEEECT-TTCSSEEEEEECSSSEEEEE
T ss_pred cEEEEecCcc-CCCceEEEEeCCCCEEEEECCC-------CEEEEEcCCCCEEEEeCCC-CccCCcEEEEECCCCCEEEE
Confidence 4333332211 111223333 257888875432 4688999876554443211 11111222222 6889987
Q ss_pred eCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEE--ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcc
Q 017349 234 EGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIV--LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEV 311 (373)
Q Consensus 234 gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~ 311 (373)
.... ..+.+||+.......+... ........+. -+|+||+....+...+.+||++.+.-..+.. ...
T Consensus 181 ~~~~------~~i~~~~~~g~~~~~~~~~-g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~-~~~--- 249 (286)
T 1q7f_A 181 DNRA------HCVKVFNYEGQYLRQIGGE-GITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALES-KVK--- 249 (286)
T ss_dssp EGGG------TEEEEEETTCCEEEEESCT-TTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEE-SSC---
T ss_pred ECCC------CEEEEEcCCCCEEEEEccC-CccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcc-cCC---
Confidence 6543 5799999865544443321 1001112233 3678988875422389999987654444432 111
Q ss_pred cccceEEE-EeCCEEEEEe
Q 017349 312 MHRPFAVN-GVEGKIYVVS 329 (373)
Q Consensus 312 ~~~~~~~~-~~~~~l~i~G 329 (373)
.....+++ .-+++||+..
T Consensus 250 ~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 250 HAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp CSCEEEEEEETTTEEEEEE
T ss_pred CCcceeEEECCCCcEEEEC
Confidence 01223444 3478999885
No 36
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.80 E-value=0.0025 Score=53.37 Aligned_cols=141 Identities=13% Similarity=0.052 Sum_probs=90.8
Q ss_pred eeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEe
Q 017349 171 FFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYD 250 (373)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd 250 (373)
..++...++.+|+-.|.. ..+.+..+|+++++=..--+++...+..+.+..+++||+..... +.+++||
T Consensus 23 tqGL~~~~~~LyestG~~-----g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~------~~v~v~D 91 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGET-----GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN------HEGFVYD 91 (243)
T ss_dssp EEEEEEETTEEEEEECCT-----TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS------SEEEEEE
T ss_pred cccEEEECCEEEEECCCC-----CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC------CEEEEEE
Confidence 346777789999988864 24579999999998665556666556667788899999997654 7899999
Q ss_pred CCCCcee-ecccCccCCcceEE-EEECCeEEEEeeCCCcceEEEeCCCCceee-ecCCCCCCcccccceEEEEeCCEEEE
Q 017349 251 INKDTWN-LMSDGMKEGWTGIS-IVLEGKLFVISEHGDCPMKQYNPDDDTWRY-VGGDKFPCEVMHRPFAVNGVEGKIYV 327 (373)
Q Consensus 251 ~~~~~W~-~~~~~~~~~~~~~~-~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i 327 (373)
+++.+-. .++. ... +.+ +.-+++||+..| ...++.+|+++.+-.. +.....+ ........+...+|+||+
T Consensus 92 ~~tl~~~~ti~~-~~~---Gwglt~dg~~L~vSdg--s~~l~~iDp~t~~~~~~I~V~~~g-~~~~~lNeLe~~~G~lya 164 (243)
T 3mbr_X 92 LATLTPRARFRY-PGE---GWALTSDDSHLYMSDG--TAVIRKLDPDTLQQVGSIKVTAGG-RPLDNLNELEWVNGELLA 164 (243)
T ss_dssp TTTTEEEEEEEC-SSC---CCEEEECSSCEEEECS--SSEEEEECTTTCCEEEEEECEETT-EECCCEEEEEEETTEEEE
T ss_pred CCcCcEEEEEeC-CCC---ceEEeeCCCEEEEECC--CCeEEEEeCCCCeEEEEEEEccCC-cccccceeeEEeCCEEEE
Confidence 9887643 3332 122 223 333567888876 4589999999865432 2210111 001112234455888885
Q ss_pred Ee
Q 017349 328 VS 329 (373)
Q Consensus 328 ~G 329 (373)
--
T Consensus 165 nv 166 (243)
T 3mbr_X 165 NV 166 (243)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 37
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.75 E-value=0.019 Score=50.55 Aligned_cols=222 Identities=11% Similarity=-0.038 Sum_probs=111.9
Q ss_pred CCCEEEEEEecCC--CCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEe
Q 017349 76 SLPYLFIFSFHKP--TARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYR 153 (373)
Q Consensus 76 ~~~~l~~~gg~~~--~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd 153 (373)
.++.+|+...... .....+.++|+.+.+....-.... ...+.+....++.+|+.+.. ...+++||
T Consensus 51 dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~v~~~~-------~~~v~~~d 117 (353)
T 3vgz_A 51 QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL------KPFGATINNTTQTLWFGNTV-------NSAVTAID 117 (353)
T ss_dssp TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS------CCCSEEEETTTTEEEEEETT-------TTEEEEEE
T ss_pred CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC------CcceEEECCCCCEEEEEecC-------CCEEEEEe
Confidence 4567777653221 124568999998877544322221 11233444435668887653 23799999
Q ss_pred CCCCceeccCCCCC--------cceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccE
Q 017349 154 ATTNQWQLASPMLT--------PRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDS 223 (373)
Q Consensus 154 ~~t~~W~~~~~~~~--------~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~ 223 (373)
+.+++-...-+... +.....++.. ++.+|+.+... ...++++|+.+.+-...-+.. .......
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~~i~~~d~~~~~~~~~~~~~-~~~~~~~ 190 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK------ESVIWVVDGGNIKLKTAIQNT-GKMSTGL 190 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS------SCEEEEEETTTTEEEEEECCC-CTTCCCC
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC------CceEEEEcCCCCceEEEecCC-CCccceE
Confidence 98886432211111 1112333332 45677765221 246999999887643321211 1111223
Q ss_pred EEE-CC-EEEEEeCccCCCccCCceEEEeCCCCceeec-ccCc--cCCcceEEEEE-CC-eEEEEeeCCCcceEEEeCCC
Q 017349 224 AVM-GS-KMYVTEGWTWPFMFSPRGGVYDINKDTWNLM-SDGM--KEGWTGISIVL-EG-KLFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 224 ~~~-~~-~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~-~~~~--~~~~~~~~~~~-~~-~l~v~gg~~~~~~~~yd~~~ 296 (373)
+.. ++ .+|+... + ..+.+||+.+++-... .... +.......+.. ++ .+|+.+ .....+.+||+.+
T Consensus 191 ~~s~dg~~l~~~~~-~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 191 ALDSEGKRLYTTNA-D------GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITD-SKAAEVLVVDTRN 262 (353)
T ss_dssp EEETTTTEEEEECT-T------SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE-SSSSEEEEEETTT
T ss_pred EECCCCCEEEEEcC-C------CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe-CCCCEEEEEECCC
Confidence 333 44 4665543 2 5788999988764322 1111 11111111222 34 466654 3357899999987
Q ss_pred CceeeecCCCCCCcccccceEEEEeCCEEEEEeC
Q 017349 297 DTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 297 ~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
++....-..+.+ ........++.||+.+.
T Consensus 263 ~~~~~~~~~~~~-----~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 263 GNILAKVAAPES-----LAVLFNPARNEAYVTHR 291 (353)
T ss_dssp CCEEEEEECSSC-----CCEEEETTTTEEEEEET
T ss_pred CcEEEEEEcCCC-----ceEEECCCCCEEEEEEC
Confidence 765443322222 12222223445777765
No 38
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.64 E-value=0.015 Score=53.66 Aligned_cols=241 Identities=6% Similarity=-0.051 Sum_probs=117.6
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCC--CCCeeeC-CCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEE
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPR--SGRWFVL-PPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMY 152 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~--~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~y 152 (373)
.+..|++.++.+ ..+.+||.. +...... .....+ ....+..+..++..+++|+. ...++.|
T Consensus 113 d~~~l~~~~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~-----~~v~~~~~sp~~~~l~~~~~-------~g~v~~~ 176 (450)
T 2vdu_B 113 DESRLIACADSD----KSLLVFDVDKTSKNVLKLRKRFCFS-----KRPNAISIAEDDTTVIIADK-------FGDVYSI 176 (450)
T ss_dssp TSSEEEEEEGGG----TEEEEEEECSSSSSCEEEEEEEECS-----SCEEEEEECTTSSEEEEEET-------TSEEEEE
T ss_pred CCCEEEEEECCC----CeEEEEECcCCCCceeeeeecccCC-----CCceEEEEcCCCCEEEEEeC-------CCcEEEE
Confidence 355666666432 346777776 4433222 100100 12233344446666666654 2268899
Q ss_pred eCCCCceec--cCCCCC-cceeeeeeE-eC---CeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec-cCCccccccccEE
Q 017349 153 RATTNQWQL--ASPMLT-PRSFFASGN-VN---GKIMAVGGTGANINETMTAVECYDPESDTWTTA-AKLRMGLARYDSA 224 (373)
Q Consensus 153 d~~t~~W~~--~~~~~~-~r~~~~~~~-~~---~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~~~~~~~~ 224 (373)
+..+..... ...+.. ......++. -+ +++++.|+.+ ..+.+||..+...... ..-........+.
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~ 249 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-------EHIKISHYPQCFIVDKWLFGHKHFVSSICC 249 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-------SCEEEEEESCTTCEEEECCCCSSCEEEEEE
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-------CcEEEEECCCCceeeeeecCCCCceEEEEE
Confidence 887665432 111111 111122222 35 6677777664 3588898877653221 1001111111122
Q ss_pred EECCEEEEEeCccCCCccCCceEEEeCCCCceee-ccc-----Cc-----------------cCCcceEEEEE--CCeEE
Q 017349 225 VMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-MSD-----GM-----------------KEGWTGISIVL--EGKLF 279 (373)
Q Consensus 225 ~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-~~~-----~~-----------------~~~~~~~~~~~--~~~l~ 279 (373)
. ++++++.|+.+ ..+.+||..+++-.. +.. +. .....-..+.. +++.+
T Consensus 250 s-d~~~l~s~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 250 G-KDYLLLSAGGD------DKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp C-STTEEEEEESS------SEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred C-CCCEEEEEeCC------CeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 2 77777777765 578999998876322 110 00 00011111222 45555
Q ss_pred EEeeCCCcceEEEeC--C-CCceeeecCCCCCCcccccceEEEEeCCEEEEEeCCcee-----eeeEEEEeecCCcccce
Q 017349 280 VISEHGDCPMKQYNP--D-DDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSGLNV-----AIGRVYEEQNGGISAEW 351 (373)
Q Consensus 280 v~gg~~~~~~~~yd~--~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~-----~~~~~~~~~~d~~~~~W 351 (373)
++++.....+.+||. . .+++..+..++.. ....++....+.+++..+..+. ...++|. ++.+...|
T Consensus 323 ~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~----~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~--~~~~~~~~ 396 (450)
T 2vdu_B 323 AFFVEATKCIIILEMSEKQKGDLALKQIITFP----YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIE--YNLNENSF 396 (450)
T ss_dssp EEEETTCSEEEEEEECSSSTTCEEEEEEEECS----SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEE--EETTTTEE
T ss_pred EEEECCCCeEEEEEeccCCCCceeeccEeccC----CceEEEEecCCcEEEEEecccCCCCCCcceEEEE--EEcCCCeE
Confidence 555534668888887 3 3455555543333 2334555556777777765432 2245665 55555555
Q ss_pred E
Q 017349 352 K 352 (373)
Q Consensus 352 ~ 352 (373)
+
T Consensus 397 ~ 397 (450)
T 2vdu_B 397 V 397 (450)
T ss_dssp E
T ss_pred E
Confidence 4
No 39
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.56 E-value=0.0041 Score=56.80 Aligned_cols=180 Identities=13% Similarity=0.036 Sum_probs=96.8
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCC---Ccc
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPML---TPR 169 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~---~~r 169 (373)
.++.+|+.+.++..+..++... ...+.+... ++.+++.++.. ..+.+||+.+++........ .+.
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~----~~~~~~~s~-~~~~~~~~~~~-------~~i~~~d~~~g~~~~~~~~~~~~~~~ 169 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGF----QPKSVRFID-NTRLAIPLLED-------EGMDVLDINSGQTVRLSPPEKYKKKL 169 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSS----CBCCCEESS-SSEEEEEBTTS-------SSEEEEETTTCCEEEECCCHHHHTTC
T ss_pred EEEEECCCCCcceEEEEEcCCC----CceEEEEeC-CCeEEEEeCCC-------CeEEEEECCCCeEeeecCcccccccC
Confidence 5778888777666554444222 112233333 78888887642 25999999988765433221 111
Q ss_pred eee-eeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-C-CEEEEEeCccCCCccCCc
Q 017349 170 SFF-ASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-G-SKMYVTEGWTWPFMFSPR 245 (373)
Q Consensus 170 ~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~-~~lyv~gG~~~~~~~~~~ 245 (373)
... .++. -++++++.++.+ ..+.+||..+.+....-.... ..-...+.. + ..+|+.+..+ ..
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d-------~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~------~~ 235 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQA-------NAVHVFDLKTLAYKATVDLTG-KWSKILLYDPIRDLVYCSNWIS------ED 235 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGG-------TEEEEEETTTCCEEEEEECSS-SSEEEEEEETTTTEEEEEETTT------TE
T ss_pred CceeEEEEcCCCEEEEEECCC-------CEEEEEECCCceEEEEEcCCC-CCeeEEEEcCCCCEEEEEecCC------Cc
Confidence 111 2222 267888877654 468999998865432211111 111122333 3 4566666544 47
Q ss_pred eEEEeCCCCceeecccCccCCcceEEEEE--CCeEEEEeeC-------CCcceEEEeCCCCceee
Q 017349 246 GGVYDINKDTWNLMSDGMKEGWTGISIVL--EGKLFVISEH-------GDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 246 i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg~-------~~~~~~~yd~~~~~W~~ 301 (373)
+.+||+.+++....-. ... ....+.+ +++.+++++. ....+.+||+.+++-..
T Consensus 236 i~~~d~~~~~~~~~~~-~~~--~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~ 297 (433)
T 3bws_A 236 ISVIDRKTKLEIRKTD-KIG--LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID 297 (433)
T ss_dssp EEEEETTTTEEEEECC-CCS--EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE
T ss_pred EEEEECCCCcEEEEec-CCC--CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe
Confidence 9999998876533221 111 1122333 4544444442 24578899998775443
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.53 E-value=0.034 Score=47.51 Aligned_cols=213 Identities=9% Similarity=0.039 Sum_probs=112.2
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.+|+... ....+..||+. ..+....... .. ..-.+.+. ..++.+|+.... ...+++||+.
T Consensus 25 ~g~l~v~~~----~~~~v~~~d~~-~~~~~~~~~~-~~---~~~~~i~~-~~~g~l~v~~~~-------~~~i~~~~~~- 86 (299)
T 2z2n_A 25 KGKVWITQH----KANMISCINLD-GKITEYPLPT-PD---AKVMCLTI-SSDGEVWFTENA-------ANKIGRITKK- 86 (299)
T ss_dssp TSCEEEEET----TTTEEEEECTT-CCEEEEECSS-TT---CCEEEEEE-CTTSCEEEEETT-------TTEEEEECTT-
T ss_pred CCCEEEEec----CCCcEEEEcCC-CCeEEecCCc-cc---CceeeEEE-CCCCCEEEeCCC-------CCeEEEECCC-
Confidence 455666432 12458889988 7766543211 11 12233333 347788887532 2368999986
Q ss_pred CceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCEEEEEe
Q 017349 157 NQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTE 234 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~g 234 (373)
++.+.............++.. ++++|+..... ..+.+||+ +++................+.. +|++|+..
T Consensus 87 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-------~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 87 GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNG-------NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp SCEEEEECSSTTCCEEEEEECTTSCEEEEETTT-------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred CcEEEEeCCCcCCCceeeEECCCCCEEEEecCC-------ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 444433211112223334443 57888865332 35889998 6655543211111111222232 67888865
Q ss_pred CccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCccc
Q 017349 235 GWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVM 312 (373)
Q Consensus 235 G~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~ 312 (373)
... ..+.+||+ +++...+..+.... ....+.. +|+||+.... ...+.+||+ +++...+.. +.. .
T Consensus 159 ~~~------~~i~~~~~-~g~~~~~~~~~~~~-~~~~i~~~~~g~l~v~~~~-~~~i~~~~~-~g~~~~~~~-~~~---~ 224 (299)
T 2z2n_A 159 NQN------NAIGRITE-SGDITEFKIPTPAS-GPVGITKGNDDALWFVEII-GNKIGRITT-SGEITEFKI-PTP---N 224 (299)
T ss_dssp TTT------TEEEEECT-TCCEEEEECSSTTC-CEEEEEECTTSSEEEEETT-TTEEEEECT-TCCEEEEEC-SST---T
T ss_pred CCC------CEEEEEcC-CCcEEEeeCCCCCC-cceeEEECCCCCEEEEccC-CceEEEECC-CCcEEEEEC-CCC---C
Confidence 322 57899999 77776543211111 1112333 5788887532 458999999 777766531 211 1
Q ss_pred ccceEEEE-eCCEEEEEe
Q 017349 313 HRPFAVNG-VEGKIYVVS 329 (373)
Q Consensus 313 ~~~~~~~~-~~~~l~i~G 329 (373)
....+++. -+|+||+..
T Consensus 225 ~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 225 ARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp CCEEEEEECSTTCEEEEE
T ss_pred CCceeEEECCCCCEEEec
Confidence 22344444 357888875
No 41
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.52 E-value=0.055 Score=49.73 Aligned_cols=172 Identities=12% Similarity=0.071 Sum_probs=92.0
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCe
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDT 207 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 207 (373)
++..++.|+.+ ..+.+||..+.+-...-.... .....++. -++..++.|+.+ ..+.+||..+++
T Consensus 279 ~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~sg~~d-------g~i~vwd~~~~~ 343 (464)
T 3v7d_B 279 HGNIVVSGSYD-------NTLIVWDVAQMKCLYILSGHT-DRIYSTIYDHERKRCISASMD-------TTIRIWDLENGE 343 (464)
T ss_dssp ETTEEEEEETT-------SCEEEEETTTTEEEEEECCCS-SCEEEEEEETTTTEEEEEETT-------SCEEEEETTTTE
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEecCCC-CCEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCc
Confidence 45556666542 268899988765322211111 11122222 245666666664 358899998875
Q ss_pred EEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCc
Q 017349 208 WTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDC 287 (373)
Q Consensus 208 W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~ 287 (373)
-.. .+............++..++.|+.+ ..+.+||+.+..-..... ........+...++++++.|+ .+
T Consensus 344 ~~~--~~~~h~~~v~~~~~~~~~l~s~s~d------g~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--dg 412 (464)
T 3v7d_B 344 LMY--TLQGHTALVGLLRLSDKFLVSAAAD------GSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS--EN 412 (464)
T ss_dssp EEE--EECCCSSCEEEEEECSSEEEEEETT------SEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE--TT
T ss_pred EEE--EEeCCCCcEEEEEEcCCEEEEEeCC------CcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec--CC
Confidence 322 1222222223344567777777765 578999998765222111 112222233556788888877 45
Q ss_pred ceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEEEEEeC
Q 017349 288 PMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 288 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
.+.+||.++++-......+.. ....++...++.+++.++
T Consensus 413 ~i~iwd~~~g~~~~~~~~~~~----~~v~~v~~~~~~l~~~~~ 451 (464)
T 3v7d_B 413 QFNIYNLRSGKLVHANILKDA----DQIWSVNFKGKTLVAAVE 451 (464)
T ss_dssp EEEEEETTTCCEEESCTTTTC----SEEEEEEEETTEEEEEEE
T ss_pred eEEEEECCCCcEEehhhccCC----CcEEEEEecCCEEEEEEE
Confidence 899999988765432111222 223344444555655555
No 42
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.51 E-value=0.036 Score=47.35 Aligned_cols=213 Identities=8% Similarity=-0.050 Sum_probs=111.7
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.+|+... ....+..||+. .+...+. ++... ....+.+.. .++.+|+.... ...++++|+ +
T Consensus 67 ~g~l~v~~~----~~~~i~~~~~~-g~~~~~~-~~~~~---~~~~~i~~~-~~g~l~v~~~~-------~~~i~~~d~-~ 128 (299)
T 2z2n_A 67 DGEVWFTEN----AANKIGRITKK-GIIKEYT-LPNPD---SAPYGITEG-PNGDIWFTEMN-------GNRIGRITD-D 128 (299)
T ss_dssp TSCEEEEET----TTTEEEEECTT-SCEEEEE-CSSTT---CCEEEEEEC-TTSCEEEEETT-------TTEEEEECT-T
T ss_pred CCCEEEeCC----CCCeEEEECCC-CcEEEEe-CCCcC---CCceeeEEC-CCCCEEEEecC-------CceEEEECC-C
Confidence 455666532 12357888886 4454432 22111 122333333 36889887532 236899999 6
Q ss_pred CceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEE
Q 017349 157 NQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVT 233 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~ 233 (373)
++...............++.. ++++|+.... ...+.+||+ +++..... ++........... +|+||+.
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~ 199 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDNALWFTENQ-------NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFV 199 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSCEEEEETT-------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEE
T ss_pred CCEEEecCCCCCCCCceEEEcCCCCEEEEeCC-------CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEE
Confidence 655443211111222333333 5688886432 246889999 77766542 1111112222222 5788887
Q ss_pred eCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcc
Q 017349 234 EGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEV 311 (373)
Q Consensus 234 gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~ 311 (373)
.... ..+.+||+ ++++..+..+..... ...+.. +|+||+... ....+.+||+ +++...+.. +..
T Consensus 200 ~~~~------~~i~~~~~-~g~~~~~~~~~~~~~-~~~i~~~~~g~l~v~~~-~~~~i~~~d~-~g~~~~~~~-~~~--- 265 (299)
T 2z2n_A 200 EIIG------NKIGRITT-SGEITEFKIPTPNAR-PHAITAGAGIDLWFTEW-GANKIGRLTS-NNIIEEYPI-QIK--- 265 (299)
T ss_dssp ETTT------TEEEEECT-TCCEEEEECSSTTCC-EEEEEECSTTCEEEEET-TTTEEEEEET-TTEEEEEEC-SSS---
T ss_pred ccCC------ceEEEECC-CCcEEEEECCCCCCC-ceeEEECCCCCEEEecc-CCceEEEECC-CCceEEEeC-CCC---
Confidence 5432 57899999 777765432211111 122333 578888652 2458999999 455554431 111
Q ss_pred cccceEEEEeCCEEEEEeC
Q 017349 312 MHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 312 ~~~~~~~~~~~~~l~i~GG 330 (373)
.....+++..+++||+...
T Consensus 266 ~~~~~~i~~~~g~l~v~~~ 284 (299)
T 2z2n_A 266 SAEPHGICFDGETIWFAME 284 (299)
T ss_dssp SCCEEEEEECSSCEEEEET
T ss_pred CCccceEEecCCCEEEEec
Confidence 1223444446788888764
No 43
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.51 E-value=0.031 Score=51.02 Aligned_cols=230 Identities=10% Similarity=-0.017 Sum_probs=116.9
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
..++++|.....-..+..-. .......+..+++.+++++.. .....++++|..+++...+...+. ..
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~-------~~v~~~~~Spdg~~la~~s~~----~~~~~i~~~d~~tg~~~~l~~~~~--~~ 225 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP-------QPLMSPAWSPDGSKLAYVTFE----SGRSALVIQTLANGAVRQVASFPR--HN 225 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES-------SCEEEEEECTTSSEEEEEECT----TSSCEEEEEETTTCCEEEEECCSS--CE
T ss_pred ceEEEEcCCCCCCEEEeCCC-------CcceeeEEcCCCCEEEEEEec----CCCcEEEEEECCCCcEEEeecCCC--cc
Confidence 57888888765444332211 123334444466555555432 123489999999987765543321 12
Q ss_pred eeeeEe-CCe-EEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEE
Q 017349 172 FASGNV-NGK-IMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGV 248 (373)
Q Consensus 172 ~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~ 248 (373)
...+.. +++ |++.+..+ ....++++|..+++.+.+...... ....+.. +|+.+++++... ....++.
T Consensus 226 ~~~~~spdg~~la~~~~~~-----g~~~i~~~d~~~~~~~~l~~~~~~--~~~~~~spdg~~l~~~s~~~---g~~~i~~ 295 (415)
T 2hqs_A 226 GAPAFSPDGSKLAFALSKT-----GSLNLYVMDLASGQIRQVTDGRSN--NTEPTWFPDSQNLAFTSDQA---GRPQVYK 295 (415)
T ss_dssp EEEEECTTSSEEEEEECTT-----SSCEEEEEETTTCCEEECCCCSSC--EEEEEECTTSSEEEEEECTT---SSCEEEE
T ss_pred cCEEEcCCCCEEEEEEecC-----CCceEEEEECCCCCEEeCcCCCCc--ccceEECCCCCEEEEEECCC---CCcEEEE
Confidence 222222 444 55444332 134699999999887665432211 1112222 565444443211 1247889
Q ss_pred EeCCCCceeecccCccCCcceEEEE--ECCeEEEEeeCC--CcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCE
Q 017349 249 YDINKDTWNLMSDGMKEGWTGISIV--LEGKLFVISEHG--DCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGK 324 (373)
Q Consensus 249 yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~v~gg~~--~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (373)
+|..++.-..+.. . ... ...+. -+|+.+++++.. ...++.+|.++++...+.... ....-....+++
T Consensus 296 ~d~~~~~~~~l~~-~-~~~-~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~------~~~~~~~spdg~ 366 (415)
T 2hqs_A 296 VNINGGAPQRITW-E-GSQ-NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF------LDETPSLAPNGT 366 (415)
T ss_dssp EETTSSCCEECCC-S-SSE-EEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS------SCEEEEECTTSS
T ss_pred EECCCCCEEEEec-C-CCc-ccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC------CcCCeEEcCCCC
Confidence 9998877554432 1 111 11222 256655554432 358999999988876654211 111222334666
Q ss_pred EEEEeCCceeeeeEEEEeecCCcccceEEecC
Q 017349 325 IYVVSSGLNVAIGRVYEEQNGGISAEWKVMTA 356 (373)
Q Consensus 325 l~i~GG~~~~~~~~~~~~~~d~~~~~W~~~~~ 356 (373)
.+++++.. .....++.+ |.+...-+.++.
T Consensus 367 ~l~~~s~~-~~~~~l~~~--d~~g~~~~~l~~ 395 (415)
T 2hqs_A 367 MVIYSSSQ-GMGSVLNLV--STDGRFKARLPA 395 (415)
T ss_dssp EEEEEEEE-TTEEEEEEE--ETTSCCEEECCC
T ss_pred EEEEEEcC-CCccEEEEE--ECCCCcEEEeeC
Confidence 66666532 223356653 333444445543
No 44
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.50 E-value=0.0031 Score=53.25 Aligned_cols=112 Identities=13% Similarity=-0.019 Sum_probs=76.5
Q ss_pred eeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeC
Q 017349 172 FASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDI 251 (373)
Q Consensus 172 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~ 251 (373)
.++...++.+|+-.|.. ..+.+.++|++|++=..--+++...+..+.+..+++||+..... +.+++||+
T Consensus 46 qGL~~~~~~LyestG~~-----g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~------~~v~v~D~ 114 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLN-----GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN------GLGFVWNI 114 (262)
T ss_dssp EEEEEETTEEEEEEEET-----TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS------SEEEEEET
T ss_pred ceEEEECCEEEEECCCC-----CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC------CEEEEEEC
Confidence 45556688999988864 23578999999997654445555445556777899999997655 78999999
Q ss_pred CCCcee-ecccCccCCcceEEEEE-CCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 252 NKDTWN-LMSDGMKEGWTGISIVL-EGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 252 ~~~~W~-~~~~~~~~~~~~~~~~~-~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
++.+-. +++. .. .+.++.. +++||+..| ...++.+|+++.+-.
T Consensus 115 ~t~~~~~ti~~-~~---eG~glt~dg~~L~~SdG--s~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 115 RNLRQVRSFNY-DG---EGWGLTHNDQYLIMSDG--TPVLRFLDPESLTPV 159 (262)
T ss_dssp TTCCEEEEEEC-SS---CCCCEEECSSCEEECCS--SSEEEEECTTTCSEE
T ss_pred ccCcEEEEEEC-CC---CceEEecCCCEEEEECC--CCeEEEEcCCCCeEE
Confidence 887643 3332 12 2223333 566887766 458999999976533
No 45
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.48 E-value=0.042 Score=47.50 Aligned_cols=176 Identities=9% Similarity=0.117 Sum_probs=91.5
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee-
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF- 171 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~- 171 (373)
.+.++|..+.+....-.-. ...........++.+++.|+.+ ..+.+||..+++-... +......
T Consensus 46 ~i~iw~~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~~~--~~~~~~~v 110 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGH------KLGISDVAWSSDSNLLVSASDD-------KTLKIWDVSSGKCLKT--LKGHSNYV 110 (312)
T ss_dssp CEEEEETTTCCEEEEECCC------SSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTCCEEEE--EECCSSCE
T ss_pred eEEEEeCCCcccchhhccC------CCceEEEEEcCCCCEEEEECCC-------CEEEEEECCCCcEEEE--EcCCCCCE
Confidence 3677888777654431111 1223334444467777777652 2688999887753221 1111111
Q ss_pred eeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEE
Q 017349 172 FASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGV 248 (373)
Q Consensus 172 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~ 248 (373)
..+.. -++.+++.|+.+ ..+.+||..+++-... ++........+.. ++.+++.|+.+ ..+..
T Consensus 111 ~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~ 175 (312)
T 4ery_A 111 FCCNFNPQSNLIVSGSFD-------ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD------GLCRI 175 (312)
T ss_dssp EEEEECSSSSEEEEEETT-------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SCEEE
T ss_pred EEEEEcCCCCEEEEEeCC-------CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC------CcEEE
Confidence 11111 245666667664 3588999987753221 1111111112222 56777777765 57899
Q ss_pred EeCCCCceeec-ccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCce
Q 017349 249 YDINKDTWNLM-SDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 249 yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W 299 (373)
||..+++-... ..............-+++.++.|+. ...+..||..+.+-
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 176 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL-DNTLKLWDYSKGKC 226 (312)
T ss_dssp EETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET-TTEEEEEETTTTEE
T ss_pred EECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcC-CCeEEEEECCCCcE
Confidence 99987754321 1111111111112235666666664 56899999987653
No 46
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.47 E-value=0.041 Score=47.03 Aligned_cols=213 Identities=11% Similarity=0.073 Sum_probs=113.9
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.+|+... ....+.+||+. .+..... ++... ..-.+.+.. .++.+|+.... ...+++||+.
T Consensus 30 ~g~l~v~~~----~~~~v~~~~~~-~~~~~~~-~~~~~---~~~~~i~~~-~~g~l~v~~~~-------~~~v~~~d~~- 91 (300)
T 2qc5_A 30 DGKVWFTQH----KANKISSLDQS-GRIKEFE-VPTPD---AKVMCLIVS-SLGDIWFTENG-------ANKIGKLSKK- 91 (300)
T ss_dssp TSCEEEEET----TTTEEEEECTT-SCEEEEE-CSSTT---CCEEEEEEC-TTSCEEEEETT-------TTEEEEECTT-
T ss_pred CCCEEEEcC----CCCeEEEECCC-CceEEEE-CCCCC---CcceeEEEC-CCCCEEEEecC-------CCeEEEECCC-
Confidence 456777542 23458889988 6666532 22110 122333333 46788887532 2368999988
Q ss_pred CceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEE
Q 017349 157 NQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVT 233 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~ 233 (373)
++...............++.. ++++|+..... ..+.+||+. ++..... ++........... +++||+.
T Consensus 92 g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-------~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~ 162 (300)
T 2qc5_A 92 GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG-------DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFT 162 (300)
T ss_dssp SCEEEEECSSTTCCEEEEEECSTTCEEEEETTT-------TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEE
T ss_pred CCeEEecCCCCCCCCccceECCCCCEEEEccCC-------CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEE
Confidence 666543221112223344433 67888875322 358889987 5554332 2211112222222 5778887
Q ss_pred eCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcc
Q 017349 234 EGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEV 311 (373)
Q Consensus 234 gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~ 311 (373)
.... ..+.+||+ +++...+..+... .....+.. +|+||+.... ...+.+||+ ++++..... +..
T Consensus 163 ~~~~------~~i~~~~~-~g~~~~~~~~~~~-~~~~~i~~d~~g~l~v~~~~-~~~i~~~~~-~g~~~~~~~-~~~--- 228 (300)
T 2qc5_A 163 ENQN------NSIGRITN-TGKLEEYPLPTNA-AAPVGITSGNDGALWFVEIM-GNKIGRITT-TGEISEYDI-PTP--- 228 (300)
T ss_dssp ETTT------TEEEEECT-TCCEEEEECSSTT-CCEEEEEECTTSSEEEEETT-TTEEEEECT-TCCEEEEEC-SST---
T ss_pred ecCC------CeEEEECC-CCcEEEeeCCCCC-CCcceEEECCCCCEEEEccC-CCEEEEEcC-CCcEEEEEC-CCC---
Confidence 5432 46899999 6776654321111 11122333 5788887532 457999999 566665531 211
Q ss_pred cccceEEEEe-CCEEEEEeC
Q 017349 312 MHRPFAVNGV-EGKIYVVSS 330 (373)
Q Consensus 312 ~~~~~~~~~~-~~~l~i~GG 330 (373)
.....+++.. +++||+...
T Consensus 229 ~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 229 NARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp TCCEEEEEECSTTCEEEEET
T ss_pred CCCceEEEECCCCCEEEecc
Confidence 1223444433 578888773
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.46 E-value=0.018 Score=50.12 Aligned_cols=205 Identities=11% Similarity=0.061 Sum_probs=103.7
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
..+.+||..+.+......+.... ....+..+..++..++.|+.+ ..+.+||..+++....-.... ...
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~~~~~d-------g~v~~~d~~~~~~~~~~~~~~-~~i 186 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSA----PACYALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQFQGHT-DGA 186 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSS----SCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCS-SCE
T ss_pred CcEEEEECCCCCcceeeecccCC----CceEEEEECCCCCEEEEEeCC-------CcEEEEeCCCCceeeeeeccc-Cce
Confidence 35778888877643333332111 223333333366666666542 258899998875432211111 111
Q ss_pred eeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEE-ECCEEEEEeCccCCCccCCceEEE
Q 017349 172 FASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAV-MGSKMYVTEGWTWPFMFSPRGGVY 249 (373)
Q Consensus 172 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~~~~~~i~~y 249 (373)
..+... +++.++.++.+ ..+.+||..+.+-...-..+. .-...+. -+++++++|+.+ ..+..|
T Consensus 187 ~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~------~~i~~~ 251 (337)
T 1gxr_A 187 SCIDISNDGTKLWTGGLD-------NTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMES------SNVEVL 251 (337)
T ss_dssp EEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETT------SCEEEE
T ss_pred EEEEECCCCCEEEEEecC-------CcEEEEECCCCceEeeecCCC--ceEEEEECCCCCEEEEEcCC------CcEEEE
Confidence 222222 55666666654 468899998875432211111 1112222 256677777654 578999
Q ss_pred eCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEE-EeCCEEEEE
Q 017349 250 DINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVN-GVEGKIYVV 328 (373)
Q Consensus 250 d~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~ 328 (373)
|..+..-..+.. ...........-++++++.++. ...+..||..+++-.... ... ....++. ..+++.++.
T Consensus 252 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~~~~~~~~~~~~--~~~----~~v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 252 HVNKPDKYQLHL-HESCVLSLKFAYCGKWFVSTGK-DNLLNAWRTPYGASIFQS--KES----SSVLSCDISVDDKYIVT 323 (337)
T ss_dssp ETTSSCEEEECC-CSSCEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEEEE--ECS----SCEEEEEECTTSCEEEE
T ss_pred ECCCCCeEEEcC-CccceeEEEECCCCCEEEEecC-CCcEEEEECCCCeEEEEe--cCC----CcEEEEEECCCCCEEEE
Confidence 998775333221 1111111112225777777665 568999999877544322 112 1122232 335666666
Q ss_pred eCC
Q 017349 329 SSG 331 (373)
Q Consensus 329 GG~ 331 (373)
|+.
T Consensus 324 ~~~ 326 (337)
T 1gxr_A 324 GSG 326 (337)
T ss_dssp EET
T ss_pred ecC
Confidence 663
No 48
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.46 E-value=0.018 Score=50.34 Aligned_cols=242 Identities=10% Similarity=0.051 Sum_probs=111.6
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCC--CCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEe
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPR--SGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYR 153 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~--~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd 153 (373)
.+..||+.+... ..+.+||.. +.++..+..++... .....+....+..+|+.+.. ...+.+||
T Consensus 48 dg~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~~~~~~-------~~~i~~~d 112 (343)
T 1ri6_A 48 DKRYLYVGVRPE----FRVLAYRIAPDDGALTFAAESALPG----SLTHISTDHQGQFVFVGSYN-------AGNVSVTR 112 (343)
T ss_dssp TSSEEEEEETTT----TEEEEEEECTTTCCEEEEEEEECSS----CCSEEEECTTSSEEEEEETT-------TTEEEEEE
T ss_pred CCCEEEEeecCC----CeEEEEEecCCCCceeeccccccCC----CCcEEEEcCCCCEEEEEecC-------CCeEEEEE
Confidence 355676654321 345556554 77776554443211 11233333324456666432 22578888
Q ss_pred CCCCc-eeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCC-CeEEecc--CCcccc-ccc-cEEE
Q 017349 154 ATTNQ-WQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPES-DTWTTAA--KLRMGL-ARY-DSAV 225 (373)
Q Consensus 154 ~~t~~-W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~~~--~~~~~~-~~~-~~~~ 225 (373)
...+. ...+...........++.. +..+|+.+..+ ..+.+||..+ ++...+. ....+. ... ..+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp EETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG-------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE
T ss_pred CCCCccccccccccCCCCceEEEECCCCCEEEEecCCC-------CEEEEEEecCCCceeeecccccccCCCCCcceEEE
Confidence 74221 2222222211112223332 34576655232 3588999887 6554332 111111 111 1222
Q ss_pred E-CCE-EEEEeCccCCCccCCceEEEeCC--CCceeeccc--CccCC----cceEEEEE--CC-eEEEEeeCCCcceEEE
Q 017349 226 M-GSK-MYVTEGWTWPFMFSPRGGVYDIN--KDTWNLMSD--GMKEG----WTGISIVL--EG-KLFVISEHGDCPMKQY 292 (373)
Q Consensus 226 ~-~~~-lyv~gG~~~~~~~~~~i~~yd~~--~~~W~~~~~--~~~~~----~~~~~~~~--~~-~l~v~gg~~~~~~~~y 292 (373)
. +++ +|+.+..+ ..+.+||.. ++.++.... ..+.. .....+.+ ++ .||+.+ .....+.+|
T Consensus 186 ~pdg~~l~~~~~~~------~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~-~~~~~i~v~ 258 (343)
T 1ri6_A 186 HPNEQYAYCVNELN------SSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD-RTASLITVF 258 (343)
T ss_dssp CTTSSEEEEEETTT------TEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE-TTTTEEEEE
T ss_pred CCCCCEEEEEeCCC------CEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe-cCCCEEEEE
Confidence 2 454 77666443 578889884 455543221 11111 11112333 34 455554 335678888
Q ss_pred eCC--CCceeeecCCCCCCcccccceEEE-EeCCE-EEEEeCCceeeeeEEEEeecCCcccceEEe
Q 017349 293 NPD--DDTWRYVGGDKFPCEVMHRPFAVN-GVEGK-IYVVSSGLNVAIGRVYEEQNGGISAEWKVM 354 (373)
Q Consensus 293 d~~--~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~-l~i~GG~~~~~~~~~~~~~~d~~~~~W~~~ 354 (373)
|.. +++++.+...+.. .....++ ..+++ ||+.++. + +.+..+..|.++..++.+
T Consensus 259 d~~~~~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~-~---~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 259 SVSEDGSVLSKEGFQPTE----TQPRGFNVDHSGKYLIAAGQK-S---HHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp EECTTSCCEEEEEEEECS----SSCCCEEECTTSSEEEEECTT-T---CEEEEEEEETTTTEEEEE
T ss_pred EEcCCCCceEEeeeecCC----CccceEEECCCCCEEEEecCC-C---CeEEEEEEcCCCceeeEc
Confidence 887 5567666543332 1122222 23444 5555532 2 233333356666666654
No 49
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.46 E-value=0.031 Score=51.28 Aligned_cols=193 Identities=10% Similarity=0.059 Sum_probs=96.9
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeE
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTW 208 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 208 (373)
++..++.|+.+ ..+.+||..+.+-.. .+...........+++..++.|+.+ ..+.+||..+++-
T Consensus 248 ~~~~l~~~~~d-------g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 248 DGRRVVSGAYD-------FMVKVWDPETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLD-------TSIRVWDVETGNC 311 (445)
T ss_dssp CSSCEEEEETT-------SCEEEEEGGGTEEEE--EECCCSSCEEEEEECSSEEEEEETT-------SCEEEEETTTCCE
T ss_pred CCCEEEEEcCC-------CEEEEEECCCCcEeE--EecCCCCceEEEEECCCEEEEEeCC-------CeEEEEECCCCCE
Confidence 45555555442 257788876654221 1111111222233366666777664 3588999887753
Q ss_pred EeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCcee-ecccCccCCcceEEEEECCeEEEEeeCCCc
Q 017349 209 TTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWN-LMSDGMKEGWTGISIVLEGKLFVISEHGDC 287 (373)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~ 287 (373)
... +............++.+++.|+.+ ..+.+||..+++-. .+..+......-.++..++++++.|+. ..
T Consensus 312 ~~~--~~~~~~~v~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~-dg 382 (445)
T 2ovr_B 312 IHT--LTGHQSLTSGMELKDNILVSGNAD------STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSD-DG 382 (445)
T ss_dssp EEE--ECCCCSCEEEEEEETTEEEEEETT------SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEET-TS
T ss_pred EEE--EcCCcccEEEEEEeCCEEEEEeCC------CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeC-CC
Confidence 221 111111222333456666677655 57899999876532 222111111112235567787777775 56
Q ss_pred ceEEEeCCCCceee-ecCCCCCCcccccceEEEE-eCCEEEEEeCCceeeeeEEEEeecCCc
Q 017349 288 PMKQYNPDDDTWRY-VGGDKFPCEVMHRPFAVNG-VEGKIYVVSSGLNVAIGRVYEEQNGGI 347 (373)
Q Consensus 288 ~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~-~~~~l~i~GG~~~~~~~~~~~~~~d~~ 347 (373)
.+.+||..+++... +...... .......++.. .++.++++|+........++.+.|+.+
T Consensus 383 ~v~iwd~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 383 TVKLWDLKTGEFIRNLVTLESG-GSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEEETTTCCEEEEEEECTTG-GGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eEEEEECCCCceeeeeeccccC-CCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 89999998876543 2111111 11112233333 355666777654433334555446544
No 50
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.45 E-value=0.027 Score=49.94 Aligned_cols=183 Identities=13% Similarity=0.082 Sum_probs=96.5
Q ss_pred EEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee-eeeEe-C--CeEEEEcCCCCCCCCcCceEE
Q 017349 124 TSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF-ASGNV-N--GKIMAVGGTGANINETMTAVE 199 (373)
Q Consensus 124 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~-~~~~~-~--~~iyv~GG~~~~~~~~~~~~~ 199 (373)
..+..++..++.|+.+ ..+.+||...+++..+..+....... .+... . +.+++.|+.+ ..+.
T Consensus 17 ~~~s~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-------g~v~ 82 (379)
T 3jrp_A 17 AVLDYYGKRLATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVL 82 (379)
T ss_dssp EEECSSSSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SCEE
T ss_pred EEEcCCCCEEEEEECC-------CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-------CEEE
Confidence 3343466667776652 15788888766665554443222222 22222 2 5667777664 3588
Q ss_pred EEeCCCCeEEeccCCccccccccEEEE--C--CEEEEEeCccCCCccCCceEEEeCCCCceee-ccc-CccCCcceEEEE
Q 017349 200 CYDPESDTWTTAAKLRMGLARYDSAVM--G--SKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-MSD-GMKEGWTGISIV 273 (373)
Q Consensus 200 ~yd~~t~~W~~~~~~~~~~~~~~~~~~--~--~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-~~~-~~~~~~~~~~~~ 273 (373)
+||..+++|..+..+.........+.. + +.+++.|+.+ ..+.+||..+..-.. ... ....... ....
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~v~-~~~~ 155 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVN-SASW 155 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECCTTCEE-EEEE
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCCCCceE-EEEE
Confidence 999999988766544433222222222 3 6677777665 578999998764221 111 0111111 1111
Q ss_pred E--------------CCeEEEEeeCCCcceEEEeCCCC--ceeeecCCCCCCcccccceEEE-EeC---CEEEEEeCC
Q 017349 274 L--------------EGKLFVISEHGDCPMKQYNPDDD--TWRYVGGDKFPCEVMHRPFAVN-GVE---GKIYVVSSG 331 (373)
Q Consensus 274 ~--------------~~~l~v~gg~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~-~~~---~~l~i~GG~ 331 (373)
. ++.+++.|+. ...+..||..++ .+..+..+... . ....++. ..+ +.+++.|+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~h--~-~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQTYVLESTLEGH--S-DWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp CCCC----------CTTCEEEEEET-TSCEEEEEEETTTTEEEEEEEECCC--S-SCEEEEEECCCCSSSEEEEEEET
T ss_pred cCccccccccccCCCCCCEEEEEeC-CCeEEEEEecCCCcceeeEEEEecc--c-CcEeEEEECCCCCCCCeEEEEeC
Confidence 1 4677777765 567888887654 34444322211 0 1122232 234 677777764
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.45 E-value=0.013 Score=52.10 Aligned_cols=179 Identities=9% Similarity=0.133 Sum_probs=92.0
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccC--CEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQ--GKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS 170 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 170 (373)
.+.+||...+.+..+..+.... ....+.....+ +.+++.|+.+ ..+.+||..+++|..+..+.....
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~ 102 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHE----GPVWRVDWAHPKFGTILASCSYD-------GKVLIWKEENGRWSQIAVHAVHSA 102 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCS----SCEEEEEECCGGGCSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSS
T ss_pred cEEEEecCCCcceeeeEecCCC----CcEEEEEeCCCCCCCEEEEeccC-------CEEEEEEcCCCceeEeeeecCCCc
Confidence 3667777655555443333111 22223333223 6677777652 268899999988766554432222
Q ss_pred ee-eeeEe-C--CeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccc-ccEEEE--------------CCEEE
Q 017349 171 FF-ASGNV-N--GKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLAR-YDSAVM--------------GSKMY 231 (373)
Q Consensus 171 ~~-~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~--------------~~~ly 231 (373)
.. .+... + +.+++.|+.+ ..+.+||..+..-.....+...... .+.+.. ++.++
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETT-------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred ceEEEEeCCCCCCCEEEEecCC-------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 22 22222 2 5667777664 3688888877632111111111111 111221 46777
Q ss_pred EEeCccCCCccCCceEEEeCCCCc--eeecccCccCCcc-eEEEEE--C---CeEEEEeeCCCcceEEEeCCCC
Q 017349 232 VTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKEGWT-GISIVL--E---GKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 232 v~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~~-~~~~~~--~---~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
+.|+.+ ..+.+||..++. +..+.. ...... -.++.+ + +++++.++. ...+..||..+.
T Consensus 176 ~~~~~d------g~i~i~d~~~~~~~~~~~~~-~~~h~~~v~~~~~sp~~~~~~~l~s~~~-dg~i~iwd~~~~ 241 (379)
T 3jrp_A 176 VTGGAD------NLVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWSPTVLLRSYLASVSQ-DRTCIIWTQDNE 241 (379)
T ss_dssp EEEETT------SCEEEEEEETTTTEEEEEEE-ECCCSSCEEEEEECCCCSSSEEEEEEET-TSCEEEEEESST
T ss_pred EEEeCC------CeEEEEEecCCCcceeeEEE-EecccCcEeEEEECCCCCCCCeEEEEeC-CCEEEEEeCCCC
Confidence 777765 478899887654 443322 111111 112222 3 677777765 567888888765
No 52
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.43 E-value=0.054 Score=47.53 Aligned_cols=220 Identities=10% Similarity=0.026 Sum_probs=110.2
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCC---CC-CCceEEEEeccCCEEEEEcCccCCCCCCcceeEEE
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKA---VC-PQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMY 152 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~---~~-~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~y 152 (373)
+..+|+.... ...+.++|+.+.+-...-..+.... .. ....+.+....++.+|+.+.. ....++++
T Consensus 100 g~~l~v~~~~----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------~~~~i~~~ 169 (353)
T 3vgz_A 100 TQTLWFGNTV----NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG------KESVIWVV 169 (353)
T ss_dssp TTEEEEEETT----TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES------SSCEEEEE
T ss_pred CCEEEEEecC----CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC------CCceEEEE
Confidence 4567766532 2368899998877533222221100 00 012334444435678877622 12369999
Q ss_pred eCCCCceeccCCCCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcc--ccccc-cEEEE-
Q 017349 153 RATTNQWQLASPMLTPRSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRM--GLARY-DSAVM- 226 (373)
Q Consensus 153 d~~t~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~--~~~~~-~~~~~- 226 (373)
|+.+.+-...-+. .......++. -++.+|+... + ..+.+||+.+++-...-.... +.... ..+..
T Consensus 170 d~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~-~-------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 170 DGGNIKLKTAIQN-TGKMSTGLALDSEGKRLYTTNA-D-------GELITIDTADNKILSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp ETTTTEEEEEECC-CCTTCCCCEEETTTTEEEEECT-T-------SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET
T ss_pred cCCCCceEEEecC-CCCccceEEECCCCCEEEEEcC-C-------CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC
Confidence 9988754332111 1111222233 2455666543 2 368899998886432211111 11111 23333
Q ss_pred C-CEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCe-EEEEeeCCCcceEEEeCCCCceeeecC
Q 017349 227 G-SKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGK-LFVISEHGDCPMKQYNPDDDTWRYVGG 304 (373)
Q Consensus 227 ~-~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-l~v~gg~~~~~~~~yd~~~~~W~~~~~ 304 (373)
+ +.+|+..... ..+.+||+.+++....-. .+.+ ...+..-+++ +|+.+. ....+.+||..+.+....-
T Consensus 241 dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~-~~~~-~~~~~s~dg~~l~v~~~-~~~~v~~~d~~~~~~~~~~- 310 (353)
T 3vgz_A 241 ARQRAFITDSKA------AEVLVVDTRNGNILAKVA-APES-LAVLFNPARNEAYVTHR-QAGKVSVIDAKSYKVVKTF- 310 (353)
T ss_dssp TTTEEEEEESSS------SEEEEEETTTCCEEEEEE-CSSC-CCEEEETTTTEEEEEET-TTTEEEEEETTTTEEEEEE-
T ss_pred CCCEEEEEeCCC------CEEEEEECCCCcEEEEEE-cCCC-ceEEECCCCCEEEEEEC-CCCeEEEEECCCCeEEEEE-
Confidence 3 4577765433 579999998887543222 2222 2222233454 676654 3568999999877554332
Q ss_pred CCCCCcccccceEEEE-eCC-EEEEEeC
Q 017349 305 DKFPCEVMHRPFAVNG-VEG-KIYVVSS 330 (373)
Q Consensus 305 ~~~~~~~~~~~~~~~~-~~~-~l~i~GG 330 (373)
+.+ ....+++. .++ .||+.+.
T Consensus 311 -~~~----~~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 311 -DTP----THPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp -ECC----SEEEEEEECTTSCEEEEEEE
T ss_pred -ecC----CCCCeEEEcCCCCEEEEEEc
Confidence 233 22233332 344 4777654
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.43 E-value=0.016 Score=50.52 Aligned_cols=208 Identities=9% Similarity=0.080 Sum_probs=103.4
Q ss_pred eeEEEeeCCCCCeee-CCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce
Q 017349 92 IQWQALDPRSGRWFV-LPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS 170 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 170 (373)
..+.+||..+..... +..+.... ......+.....++..+++|+.+ ..+.+||..+++......+.....
T Consensus 72 g~i~iw~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~ 142 (337)
T 1gxr_A 72 GCVKVWDISHPGNKSPVSQLDCLN--RDNYIRSCKLLPDGCTLIVGGEA-------STLSIWDLAAPTPRIKAELTSSAP 142 (337)
T ss_dssp SEEEEEETTSTTCCSCSEEEECSC--TTSBEEEEEECTTSSEEEEEESS-------SEEEEEECCCC--EEEEEEECSSS
T ss_pred CeEEEEECCCCCceeeeecccccC--CCCcEEEEEEcCCCCEEEEEcCC-------CcEEEEECCCCCcceeeecccCCC
Confidence 357778877654211 11111000 01223344444466666666542 278999998887544333222211
Q ss_pred e-eeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCce
Q 017349 171 F-FASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRG 246 (373)
Q Consensus 171 ~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i 246 (373)
. ..+... +++.++.|+.+ ..+.+||..+++.... +............ ++..++.++.+ ..+
T Consensus 143 ~i~~~~~~~~~~~l~~~~~d-------g~v~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d------g~i 207 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQ--FQGHTDGASCIDISNDGTKLWTGGLD------NTV 207 (337)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SEE
T ss_pred ceEEEEECCCCCEEEEEeCC-------CcEEEEeCCCCceeee--eecccCceEEEEECCCCCEEEEEecC------CcE
Confidence 1 122222 55666666654 3588999988764332 1111111122222 56667777655 578
Q ss_pred EEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEE-EeCCEE
Q 017349 247 GVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVN-GVEGKI 325 (373)
Q Consensus 247 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~l 325 (373)
..||+.+++-...-. ...........-+++++++|+. ...+..||..+.+-..+.. .. .....+. ..++++
T Consensus 208 ~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~-~~~i~~~~~~~~~~~~~~~--~~----~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 208 RSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGME-SSNVEVLHVNKPDKYQLHL--HE----SCVLSLKFAYCGKW 279 (337)
T ss_dssp EEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEET-TSCEEEEETTSSCEEEECC--CS----SCEEEEEECTTSSE
T ss_pred EEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcC-CCcEEEEECCCCCeEEEcC--Cc----cceeEEEECCCCCE
Confidence 999998775332211 1111111112236677777764 5689999998765443321 11 1112222 335666
Q ss_pred EEEeCC
Q 017349 326 YVVSSG 331 (373)
Q Consensus 326 ~i~GG~ 331 (373)
++.|+.
T Consensus 280 l~~~~~ 285 (337)
T 1gxr_A 280 FVSTGK 285 (337)
T ss_dssp EEEEET
T ss_pred EEEecC
Confidence 666664
No 54
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.42 E-value=0.0084 Score=50.70 Aligned_cols=138 Identities=14% Similarity=0.006 Sum_probs=85.8
Q ss_pred eeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeC
Q 017349 172 FASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDI 251 (373)
Q Consensus 172 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~ 251 (373)
.++...++.||+..|.. ..+.++|++|++=..-- ++...+..+.+..+++||+..... +.+++||+
T Consensus 58 qGL~~~~~~Ly~stG~~-------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~------~~v~V~D~ 123 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ-------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE------GLLFTWSG 123 (268)
T ss_dssp EEEEEETTEEEEEETTT-------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS------CEEEEEET
T ss_pred ceEEEECCEEEEEcCCC-------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC------CEEEEEEC
Confidence 45666789999998875 22889999998743322 554445555777789999987654 78999999
Q ss_pred CCCcee-ecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceee-ecCCCCCCcccccceEEEEeCCEEEEEe
Q 017349 252 NKDTWN-LMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRY-VGGDKFPCEVMHRPFAVNGVEGKIYVVS 329 (373)
Q Consensus 252 ~~~~W~-~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~l~i~G 329 (373)
++.+-. +++. .+.++ + .+.-+++||+..| ...++.+|+++.+-.. +.....+ ........+...+|+||+--
T Consensus 124 ~Tl~~~~ti~~-~~eGw-G-Lt~Dg~~L~vSdG--s~~l~~iDp~T~~v~~~I~V~~~g-~~v~~lNeLe~~dG~lyanv 197 (268)
T 3nok_A 124 MPPQRERTTRY-SGEGW-G-LCYWNGKLVRSDG--GTMLTFHEPDGFALVGAVQVKLRG-QPVELINELECANGVIYANI 197 (268)
T ss_dssp TTTEEEEEEEC-SSCCC-C-EEEETTEEEEECS--SSEEEEECTTTCCEEEEEECEETT-EECCCEEEEEEETTEEEEEE
T ss_pred CcCcEEEEEeC-CCcee-E-EecCCCEEEEECC--CCEEEEEcCCCCeEEEEEEeCCCC-cccccccccEEeCCEEEEEE
Confidence 987643 3332 22222 2 2445778888876 5599999998865432 2211111 00111123444588888543
No 55
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.42 E-value=0.048 Score=46.67 Aligned_cols=236 Identities=9% Similarity=0.023 Sum_probs=120.7
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCC--eeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGR--WFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRA 154 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~ 154 (373)
++.+++.+. ....+.++|+++.+ |+.-..-. . ..+...+.. ++.+++.+. +.++.||+
T Consensus 4 ~~~~lv~~~----~~~~v~~~d~~tG~~~w~~~~~~~--~----~~~~~~~~p-dG~ilvs~~---------~~V~~~d~ 63 (276)
T 3no2_A 4 PQHLLVGGS----GWNKIAIINKDTKEIVWEYPLEKG--W----ECNSVAATK-AGEILFSYS---------KGAKMITR 63 (276)
T ss_dssp CCEEEEECT----TCSEEEEEETTTTEEEEEEECCTT--C----CCCEEEECT-TSCEEEECB---------SEEEEECT
T ss_pred CCcEEEeeC----CCCEEEEEECCCCeEEEEeCCCcc--C----CCcCeEECC-CCCEEEeCC---------CCEEEECC
Confidence 445565542 34567889987765 54432110 0 223444443 778888432 26899999
Q ss_pred CCC--ceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCe-EEec--cCCccc--cccccEEEE
Q 017349 155 TTN--QWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDT-WTTA--AKLRMG--LARYDSAVM 226 (373)
Q Consensus 155 ~t~--~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~--~~~~~~--~~~~~~~~~ 226 (373)
++ .|+.-.. .....+++.. -++++++....+ ...++.+|+..+. |+.- ...+.+ .........
T Consensus 64 -~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~ 134 (276)
T 3no2_A 64 -DGRELWNIAAP--AGCEMQTARILPDGNALVAWCGH------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNK 134 (276)
T ss_dssp -TSCEEEEEECC--TTCEEEEEEECTTSCEEEEEEST------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECT
T ss_pred -CCCEEEEEcCC--CCccccccEECCCCCEEEEecCC------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECC
Confidence 55 3654331 1112233333 356666654321 2357788885442 4422 111111 111223344
Q ss_pred CCEEEEEeCccCCCccCCceEEEeCCCCc--eeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCC--ceeee
Q 017349 227 GSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDD--TWRYV 302 (373)
Q Consensus 227 ~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~--~W~~~ 302 (373)
+|.+++....+ ..+.+||++ ++ |+.-.. ...+......+|.+++.+.. ...+..+|++++ .|+.-
T Consensus 135 ~G~~lv~~~~~------~~v~~~d~~-G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~-~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 135 KGNYLVPLFAT------SEVREIAPN-GQLLNSVKLS---GTPFSSAFLDNGDCLVACGD-AHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp TSCEEEEETTT------TEEEEECTT-SCEEEEEECS---SCCCEEEECTTSCEEEECBT-TSEEEEECTTTCCEEEEEE
T ss_pred CCCEEEEecCC------CEEEEECCC-CCEEEEEECC---CCccceeEcCCCCEEEEeCC-CCeEEEEeCcCCcEEEEec
Confidence 67777665433 579999997 54 654321 11122334447888887765 457999999965 45543
Q ss_pred cCCCCCCcccccceEEE-EeCCEEEEEe--CCce----eeeeEEEEeecCCcccceEEe
Q 017349 303 GGDKFPCEVMHRPFAVN-GVEGKIYVVS--SGLN----VAIGRVYEEQNGGISAEWKVM 354 (373)
Q Consensus 303 ~~~~~~~~~~~~~~~~~-~~~~~l~i~G--G~~~----~~~~~~~~~~~d~~~~~W~~~ 354 (373)
.. ..+........++. ..+|.+||.. |... .....+++... ..+..|+--
T Consensus 204 ~~-~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~-~g~~~W~~~ 260 (276)
T 3no2_A 204 AN-DIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDS-EGKVVWQLN 260 (276)
T ss_dssp GG-GSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECT-TSBEEEEEC
T ss_pred CC-CCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECC-CCCEEEEec
Confidence 21 11101111223443 4588999987 5321 02335555323 445577743
No 56
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.38 E-value=0.014 Score=49.23 Aligned_cols=174 Identities=12% Similarity=0.080 Sum_probs=89.5
Q ss_pred cCCEEEE-EcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCC
Q 017349 128 RQGKLFV-LGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPES 205 (373)
Q Consensus 128 ~~~~i~v-~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t 205 (373)
.++.+|+ .... ...+.+||+.+.......... .....+++.. ++++|+... + ..+.+||+.+
T Consensus 33 ~~g~l~v~~~~~-------~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~-~-------~~i~~~d~~~ 96 (270)
T 1rwi_B 33 SAGNVYVTSEGM-------YGRVVKLATGSTGTTVLPFNG-LYQPQGLAVDGAGTVYVTDF-N-------NRVVTLAAGS 96 (270)
T ss_dssp TTCCEEEEECSS-------SCEEEEECC-----EECCCCS-CCSCCCEEECTTCCEEEEET-T-------TEEEEECTTC
T ss_pred CCCCEEEEccCC-------CCcEEEecCCCcccceEeeCC-cCCcceeEECCCCCEEEEcC-C-------CEEEEEeCCC
Confidence 3678998 5332 237889998776554432211 1112233333 567888754 2 3688999988
Q ss_pred CeEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeC
Q 017349 206 DTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEH 284 (373)
Q Consensus 206 ~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~ 284 (373)
+....+..... ..-...++. +|++|+..... ..+.+||..+.............-.+.+..-+|+||+....
T Consensus 97 ~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 169 (270)
T 1rwi_B 97 NNQTVLPFDGL-NYPEGLAVDTQGAVYVADRGN------NRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTD 169 (270)
T ss_dssp SCCEECCCCSC-SSEEEEEECTTCCEEEEEGGG------TEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGG
T ss_pred ceEeeeecCCc-CCCcceEECCCCCEEEEECCC------CEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECC
Confidence 76544421110 111223332 67888875433 46888887766543322111011112222236788887643
Q ss_pred CCcceEEEeCCCCceeeecCCCCCCcccccceEEEEe-CCEEEEEeC
Q 017349 285 GDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGV-EGKIYVVSS 330 (373)
Q Consensus 285 ~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~l~i~GG 330 (373)
...+.+||+....-........ ....+++.. +|.||+...
T Consensus 170 -~~~i~~~~~~~~~~~~~~~~~~-----~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 170 -NNRVVKLEAESNNQVVLPFTDI-----TAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp -GTEEEEECTTTCCEEECCCSSC-----CSEEEEEECTTCCEEEEET
T ss_pred -CCEEEEEecCCCceEeecccCC-----CCceEEEECCCCCEEEEEC
Confidence 4589999998765433221111 223445443 468888874
No 57
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.36 E-value=0.027 Score=51.19 Aligned_cols=200 Identities=12% Similarity=0.010 Sum_probs=101.9
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.+++.++. ...+.++|+.+.+........... ..........+..++.+++.++.+ ..+.+||..+
T Consensus 133 ~~~~~~~~~~----~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~s~~~d-------~~v~~~d~~~ 200 (433)
T 3bws_A 133 NTRLAIPLLE----DEGMDVLDINSGQTVRLSPPEKYK-KKLGFVETISIPEHNELWVSQMQA-------NAVHVFDLKT 200 (433)
T ss_dssp SSEEEEEBTT----SSSEEEEETTTCCEEEECCCHHHH-TTCCEEEEEEEGGGTEEEEEEGGG-------TEEEEEETTT
T ss_pred CCeEEEEeCC----CCeEEEEECCCCeEeeecCccccc-ccCCceeEEEEcCCCEEEEEECCC-------CEEEEEECCC
Confidence 5566666532 234888999888766543321000 000122233445578888887652 3789999987
Q ss_pred CceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCEEEEE
Q 017349 157 NQWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVT 233 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~ 233 (373)
++....-... ......++.. +..+|+.++.+ ..+.+||+.+++....-.. ...-...+.. +++.+++
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~ 270 (433)
T 3bws_A 201 LAYKATVDLT-GKWSKILLYDPIRDLVYCSNWIS-------EDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYI 270 (433)
T ss_dssp CCEEEEEECS-SSSEEEEEEETTTTEEEEEETTT-------TEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEE
T ss_pred ceEEEEEcCC-CCCeeEEEEcCCCCEEEEEecCC-------CcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEE
Confidence 6543221111 1111222322 45676766543 3689999988865433221 1111222222 5544444
Q ss_pred eCccCCCc--cCCceEEEeCCCCceeecccCccCCcceEEEEECC-eEEEEeeCCCcceEEEeCCCCcee
Q 017349 234 EGWTWPFM--FSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEG-KLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 234 gG~~~~~~--~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
++...... ....+.+||+.+++-..... .+......+..-++ .+|+.++. ...+.+||..+++-.
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~-~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMC-CSKIEVYDLKEKKVQ 338 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETT-TTEEEEEETTTTEEE
T ss_pred EECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecC-CCEEEEEECCCCcEE
Confidence 44321111 12478899998876433221 11111111122234 57666543 668999999866443
No 58
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.35 E-value=0.034 Score=55.29 Aligned_cols=203 Identities=8% Similarity=0.059 Sum_probs=111.5
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCC---C-c
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPML---T-P 168 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~---~-~ 168 (373)
-++.||+.++++........+. ....+.....++.|++... ..+++||+.+++|+...... . .
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~~~----~~v~~i~~d~~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKNEL----LDVRVFYEDKNKKIWIGTH---------AGVFVIDLASKKVIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEECSSSCEEEECCSTTTCC----CCEEEEEECTTSEEEEEET---------TEEEEEESSSSSCCEEECTTTSSCSC
T ss_pred CEEEEcCCCCcEEEeccCCCCC----CeEEEEEECCCCCEEEEEC---------CceEEEeCCCCeEEecccCccccccc
Confidence 3678888888887764321111 1222222333678887532 36999999999887654322 0 1
Q ss_pred ceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccC---CccccccccEEEE--CCEEEEEeCccCCCcc
Q 017349 169 RSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAK---LRMGLARYDSAVM--GSKMYVTEGWTWPFMF 242 (373)
Q Consensus 169 r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~---~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~ 242 (373)
....++.. -++.|++.... ..+.+||+.+++++.... ++.. ....... +|.|++...
T Consensus 495 ~~i~~i~~d~~g~lWigt~~--------~Gl~~~~~~~~~~~~~~~~~~l~~~--~i~~i~~d~~g~lWi~T~------- 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFG--------GGVGIYTPDMQLVRKFNQYEGFCSN--TINQIYRSSKGQMWLATG------- 557 (781)
T ss_dssp SCEEEEEECTTCCEEEEESS--------SCEEEECTTCCEEEEECTTTTCSCS--CEEEEEECTTSCEEEEET-------
T ss_pred ceeEEEEEcCCCCEEEEEcC--------CCEEEEeCCCCeEEEccCCCCCCCC--eeEEEEECCCCCEEEEEC-------
Confidence 11122222 25677765321 238899999999887643 2211 1112222 577776543
Q ss_pred CCce-EEEeCCCCceeeccc--CccCCcceEEEE-ECCeEEEEeeCCCcceEEEeCCCCceeeecC-CCCCCcccccceE
Q 017349 243 SPRG-GVYDINKDTWNLMSD--GMKEGWTGISIV-LEGKLFVISEHGDCPMKQYNPDDDTWRYVGG-DKFPCEVMHRPFA 317 (373)
Q Consensus 243 ~~~i-~~yd~~~~~W~~~~~--~~~~~~~~~~~~-~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~~~~ 317 (373)
..+ .+||+++++++.... .++.......+. -+|+|++.+. ..+.+||++++++..... -.++... ....+
T Consensus 558 -~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~---~Gl~~~~~~~~~~~~~~~~dGl~~~~-f~~~~ 632 (781)
T 3v9f_A 558 -EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN---TGISCYITSKKCFYTYDHSNNIPQGS-FISGC 632 (781)
T ss_dssp -TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS---SCEEEEETTTTEEEEECGGGTCCSSC-EEEEE
T ss_pred -CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC---CceEEEECCCCceEEecccCCccccc-cccCc
Confidence 246 899999998876543 222222222222 2577887653 369999999998887653 1222111 11123
Q ss_pred EEE-eCCEEEEEeC
Q 017349 318 VNG-VEGKIYVVSS 330 (373)
Q Consensus 318 ~~~-~~~~l~i~GG 330 (373)
++. -+|+||+-|-
T Consensus 633 ~~~~~~G~l~~g~~ 646 (781)
T 3v9f_A 633 VTKDHNGLIYFGSI 646 (781)
T ss_dssp EEECTTSCEEEEET
T ss_pred eEECCCCEEEEECC
Confidence 333 3677766554
No 59
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.34 E-value=0.021 Score=49.99 Aligned_cols=154 Identities=10% Similarity=0.066 Sum_probs=80.4
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEE
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
+..+..++.+++.|+.+ ..+.+||..+++-...-...... ...++. -+++.++.|+.+ ..+.+|
T Consensus 85 ~~~~~~~~~~l~s~s~D-------~~i~lWd~~~~~~~~~~~~~~~~-~~~~~~spdg~~l~~g~~d-------g~v~i~ 149 (321)
T 3ow8_A 85 SVDISHTLPIAASSSLD-------AHIRLWDLENGKQIKSIDAGPVD-AWTLAFSPDSQYLATGTHV-------GKVNIF 149 (321)
T ss_dssp EEEECSSSSEEEEEETT-------SEEEEEETTTTEEEEEEECCTTC-CCCEEECTTSSEEEEECTT-------SEEEEE
T ss_pred EEEECCCCCEEEEEeCC-------CcEEEEECCCCCEEEEEeCCCcc-EEEEEECCCCCEEEEEcCC-------CcEEEE
Confidence 33444456677777652 26889998877532211111111 111222 256666676654 357888
Q ss_pred eCCCCeEEeccCCcccccc-ccEEE-ECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEE
Q 017349 202 DPESDTWTTAAKLRMGLAR-YDSAV-MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLF 279 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~~~~-~~~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~ 279 (373)
|..+++-... +...... .+.+. -++++++.|+.+ ..+.+||..+++-...-..........+..-+++++
T Consensus 150 ~~~~~~~~~~--~~~~~~~v~~~~~spdg~~lasg~~d------g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l 221 (321)
T 3ow8_A 150 GVESGKKEYS--LDTRGKFILSIAYSPDGKYLASGAID------GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL 221 (321)
T ss_dssp ETTTCSEEEE--EECSSSCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEE
T ss_pred EcCCCceeEE--ecCCCceEEEEEECCCCCEEEEEcCC------CeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEE
Confidence 8877653221 1111111 11222 267777777766 578999998875322111111111111122367777
Q ss_pred EEeeCCCcceEEEeCCCCcee
Q 017349 280 VISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 280 v~gg~~~~~~~~yd~~~~~W~ 300 (373)
+.|+. ...+.+||..+....
T Consensus 222 ~s~s~-dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 222 VTASD-DGYIKIYDVQHANLA 241 (321)
T ss_dssp EEECT-TSCEEEEETTTCCEE
T ss_pred EEEcC-CCeEEEEECCCccee
Confidence 77665 568999998876543
No 60
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.32 E-value=0.019 Score=52.63 Aligned_cols=144 Identities=10% Similarity=0.098 Sum_probs=77.1
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceecc-CCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLA-SPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT 207 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 207 (373)
++..++.|+.+ ..+.+||..+..-... ..+...........+++..++.|+.+ ..+.+||..+.+
T Consensus 222 ~~~~l~s~s~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-------g~i~vwd~~~~~ 287 (435)
T 1p22_A 222 NNGMMVTCSKD-------RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-------RTIKVWNTSTCE 287 (435)
T ss_dssp CTTEEEEEETT-------SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-------SEEEEEETTTCC
T ss_pred cCCEEEEeeCC-------CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-------CeEEEEECCcCc
Confidence 44466666542 2688899877643211 11111111222233356666666654 368899988875
Q ss_pred EEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCc
Q 017349 208 WTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDC 287 (373)
Q Consensus 208 W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~ 287 (373)
-.. .+........+...++.+++.|+.+ ..+.+||..+++-...-..... .-.++..+++.++.|+. ..
T Consensus 288 ~~~--~~~~~~~~v~~~~~~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~~~~l~sg~~-dg 356 (435)
T 1p22_A 288 FVR--TLNGHKRGIACLQYRDRLVVSGSSD------NTIRLWDIECGACLRVLEGHEE--LVRCIRFDNKRIVSGAY-DG 356 (435)
T ss_dssp EEE--EEECCSSCEEEEEEETTEEEEEETT------SCEEEEETTTCCEEEEECCCSS--CEEEEECCSSEEEEEET-TS
T ss_pred EEE--EEcCCCCcEEEEEeCCCEEEEEeCC------CeEEEEECCCCCEEEEEeCCcC--cEEEEEecCCEEEEEeC-CC
Confidence 322 1221112222334466777777765 5799999987653211110111 11224458888777775 56
Q ss_pred ceEEEeCCCC
Q 017349 288 PMKQYNPDDD 297 (373)
Q Consensus 288 ~~~~yd~~~~ 297 (373)
.+.+||..+.
T Consensus 357 ~i~vwd~~~~ 366 (435)
T 1p22_A 357 KIKVWDLVAA 366 (435)
T ss_dssp CEEEEEHHHH
T ss_pred cEEEEECCCC
Confidence 8889987543
No 61
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.29 E-value=0.036 Score=47.91 Aligned_cols=218 Identities=11% Similarity=0.051 Sum_probs=111.2
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+... ....+++||+.++...... .+ ......+...++.+++..+ ..+++||+.+
T Consensus 24 ~~~l~~~d~----~~~~i~~~d~~~~~~~~~~-~~-------~~~~~i~~~~dG~l~v~~~---------~~l~~~d~~~ 82 (297)
T 3g4e_A 24 SNSLLFVDI----PAKKVCRWDSFTKQVQRVT-MD-------APVSSVALRQSGGYVATIG---------TKFCALNWKE 82 (297)
T ss_dssp TTEEEEEET----TTTEEEEEETTTCCEEEEE-CS-------SCEEEEEEBTTSSEEEEET---------TEEEEEETTT
T ss_pred CCEEEEEEC----CCCEEEEEECCCCcEEEEe-CC-------CceEEEEECCCCCEEEEEC---------CeEEEEECCC
Confidence 466777643 2356889999987664432 22 1122333334667776531 2699999999
Q ss_pred CceeccCCCCC--c--ceeeeeeEeCCeEEEEcCCCCC----CCCcCceEEEEeCCCCeEEec-cCCccccccccEEEE-
Q 017349 157 NQWQLASPMLT--P--RSFFASGNVNGKIMAVGGTGAN----INETMTAVECYDPESDTWTTA-AKLRMGLARYDSAVM- 226 (373)
Q Consensus 157 ~~W~~~~~~~~--~--r~~~~~~~~~~~iyv~GG~~~~----~~~~~~~~~~yd~~t~~W~~~-~~~~~~~~~~~~~~~- 226 (373)
++++.+..... + +.....+.-++++|+-.-.... .......++++|+.. +...+ ..+..+ ...+..
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p---ngi~~sp 158 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS---NGLDWSL 158 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE---EEEEECT
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc---cceEEcC
Confidence 98876643321 1 2222222236777764211100 012335688888753 33322 111111 122332
Q ss_pred CC-EEEEEeCccCCCccCCceEEEeC--CCCceee---cccCcc-CCc-ceEEEEECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 227 GS-KMYVTEGWTWPFMFSPRGGVYDI--NKDTWNL---MSDGMK-EGW-TGISIVLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 227 ~~-~lyv~gG~~~~~~~~~~i~~yd~--~~~~W~~---~~~~~~-~~~-~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
++ .||+..... ..|++||. .++.... +..... ... .+.++--+|+||+.... ...+.+||+++++
T Consensus 159 dg~~lyv~~~~~------~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~-~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 159 DHKIFYYIDSLS------YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN-GGRVIRLDPVTGK 231 (297)
T ss_dssp TSCEEEEEEGGG------TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-TTEEEEECTTTCC
T ss_pred CCCEEEEecCCC------CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-CCEEEEEcCCCce
Confidence 44 588776543 57888876 4554421 111000 111 12223346889987543 4479999998776
Q ss_pred eeeecCCCCCCcccccceEEEEe---CCEEEEEeCC
Q 017349 299 WRYVGGDKFPCEVMHRPFAVNGV---EGKIYVVSSG 331 (373)
Q Consensus 299 W~~~~~~~~~~~~~~~~~~~~~~---~~~l~i~GG~ 331 (373)
....-.+|.. ...+++.. ++.|||....
T Consensus 232 ~~~~i~~p~~-----~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 232 RLQTVKLPVD-----KTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEEECSSS-----BEEEEEEESGGGCEEEEEEBC
T ss_pred EEEEEECCCC-----CceEEEEeCCCCCEEEEEcCC
Confidence 5443322322 22333332 2579998764
No 62
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.27 E-value=0.011 Score=52.69 Aligned_cols=207 Identities=9% Similarity=0.005 Sum_probs=96.5
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.++|..+++-.......... ......+..+..++..++.|+.+ ..+.+||..+++-...-..... ...
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~--h~~~V~~v~~spdg~~l~sgs~d-------g~v~iwd~~~~~~~~~~~~h~~-~v~ 185 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYE--HDDIVKTLSVFSDGTQAVSGGKD-------FSVKVWDLSQKAVLKSYNAHSS-EVN 185 (357)
T ss_dssp CEEEC--------CCCCEEECC--CSSCEEEEEECSSSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSS-CEE
T ss_pred EEEEeeccccceeEEEeeccCC--CCCCEEEEEECCCCCEEEEEeCC-------CeEEEEECCCCcEEEEEcCCCC-CEE
Confidence 4677887766433222211000 01123334444477777777652 2588999888754322111111 111
Q ss_pred eeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE---CCEEEEEeCccCCCccCCceE
Q 017349 173 ASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM---GSKMYVTEGWTWPFMFSPRGG 247 (373)
Q Consensus 173 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~ 247 (373)
.++.. ++.+++.++.+ ..+.+||..+.+-...............+.. ++.+++.|+.+ ..+.
T Consensus 186 ~v~~s~~~~~~~~s~~~d-------g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d------~~i~ 252 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGED-------GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET------GNVS 252 (357)
T ss_dssp EEEECTTCSSCEEEEETT-------SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS------SCEE
T ss_pred EEEEccCCCceeeeeccC-------CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc------ccee
Confidence 22222 33466666664 3478888877653322222111111122222 35677777665 5789
Q ss_pred EEeCCCCceeecccCccCCcceEEEEE--CC-eEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEE--eC
Q 017349 248 VYDINKDTWNLMSDGMKEGWTGISIVL--EG-KLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNG--VE 322 (373)
Q Consensus 248 ~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~ 322 (373)
+||+.+.+=...-. ...... .++.+ ++ ++++.|+. ...+.+||.++++-... +... ..-.+++. .+
T Consensus 253 ~wd~~~~~~~~~~~-~~~~~v-~~l~~sp~~~~~lasgs~-D~~i~iwd~~~~~~~~~--~~H~----~~V~~vafsP~d 323 (357)
T 4g56_B 253 LVNIKNPDSAQTSA-VHSQNI-TGLAYSYHSSPFLASISE-DCTVAVLDADFSEVFRD--LSHR----DFVTGVAWSPLD 323 (357)
T ss_dssp EEESSCGGGCEEEC-CCSSCE-EEEEECSSSSCCEEEEET-TSCEEEECTTSCEEEEE--CCCS----SCEEEEEECSSS
T ss_pred EEECCCCcEeEEEe-ccceeE-EEEEEcCCCCCEEEEEeC-CCEEEEEECCCCcEeEE--CCCC----CCEEEEEEeCCC
Confidence 99998764211111 111111 12222 44 55555554 56899999987754433 2222 12233332 36
Q ss_pred CEEEEEeCC
Q 017349 323 GKIYVVSSG 331 (373)
Q Consensus 323 ~~l~i~GG~ 331 (373)
+.+++.||.
T Consensus 324 ~~~l~s~s~ 332 (357)
T 4g56_B 324 HSKFTTVGW 332 (357)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEEcC
Confidence 777777774
No 63
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.24 E-value=0.083 Score=46.75 Aligned_cols=193 Identities=10% Similarity=0.050 Sum_probs=89.2
Q ss_pred ceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCc-c
Q 017349 91 RIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTP-R 169 (373)
Q Consensus 91 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-r 169 (373)
...++.+|+.+.+...+.... .. .-...+....+..||+.+... . ....-.+|.+|..+++.+.+...+.. .
T Consensus 28 ~i~~~~~d~~~g~~~~~~~~~-~~----~p~~l~~spdg~~l~~~~~~~-~-~~~~v~~~~~~~~~g~~~~~~~~~~~~~ 100 (361)
T 3scy_A 28 GIYTFRFNEETGESLPLSDAE-VA----NPSYLIPSADGKFVYSVNEFS-K-DQAAVSAFAFDKEKGTLHLLNTQKTMGA 100 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEEE-CS----CCCSEEECTTSSEEEEEECCS-S-TTCEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred CEEEEEEeCCCCCEEEeeccc-CC----CCceEEECCCCCEEEEEEccC-C-CCCcEEEEEEeCCCCcEEEeeEeccCCC
Confidence 345667788888876654431 11 111222223244577665421 0 01222445666666777666544322 2
Q ss_pred eeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe-EEecc-------CCccc-c---cc-ccEEEE-CCE-EEEEe
Q 017349 170 SFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT-WTTAA-------KLRMG-L---AR-YDSAVM-GSK-MYVTE 234 (373)
Q Consensus 170 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~-------~~~~~-~---~~-~~~~~~-~~~-lyv~g 234 (373)
....++.-+..+|+....+ ..+.+|+..++. ...+. .-+.+ + .. +.++.. +|+ ||+.+
T Consensus 101 ~p~~~~~dg~~l~~~~~~~-------~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 173 (361)
T 3scy_A 101 DPCYLTTNGKNIVTANYSG-------GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADD 173 (361)
T ss_dssp CEEEEEECSSEEEEEETTT-------TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEE
T ss_pred CcEEEEECCCEEEEEECCC-------CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEe
Confidence 2223333334466554322 457888876542 11111 00110 0 11 223332 565 77655
Q ss_pred CccCCCccCCceEEEeCCCCc-------eeec------ccCccCCcceEEEEECCe-EEEEeeCCCcceEEEeCCCCcee
Q 017349 235 GWTWPFMFSPRGGVYDINKDT-------WNLM------SDGMKEGWTGISIVLEGK-LFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 235 G~~~~~~~~~~i~~yd~~~~~-------W~~~------~~~~~~~~~~~~~~~~~~-l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
... ..+.+|+..... .... ..+........+..-+++ +|+.+ .....+.+||..++++.
T Consensus 174 ~~~------~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~-~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 174 LGT------DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN-EIGGTVIAFRYADGMLD 246 (361)
T ss_dssp TTT------TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTTCEEEEEEEETTEEE
T ss_pred CCC------CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc-CCCCeEEEEEecCCceE
Confidence 322 467778766443 2111 111111111111222555 66654 33568899998877776
Q ss_pred eecC
Q 017349 301 YVGG 304 (373)
Q Consensus 301 ~~~~ 304 (373)
.+..
T Consensus 247 ~~~~ 250 (361)
T 3scy_A 247 EIQT 250 (361)
T ss_dssp EEEE
T ss_pred EeEE
Confidence 5543
No 64
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.23 E-value=0.021 Score=50.60 Aligned_cols=181 Identities=12% Similarity=0.185 Sum_probs=90.6
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCC-Ccce
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPML-TPRS 170 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~ 170 (373)
..+.+||..+.++..+..+.... ....+..+..++..++.|+.+ ..+.+||..++++.....+. ....
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~ 98 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHN----GQVTGVDWAPDSNRIVTCGTD-------RNAYVWTLKGRTWKPTLVILRINRA 98 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCS----SCEEEEEEETTTTEEEEEETT-------SCEEEEEEETTEEEEEEECCCCSSC
T ss_pred CEEEEEeCCCCcEEeeeeecCCC----CcccEEEEeCCCCEEEEEcCC-------CeEEEEECCCCeeeeeEEeecCCCc
Confidence 45788898888655544443111 223333333366666776642 25888998888765443222 1112
Q ss_pred eeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCe-EEeccCCcccc-ccc-cEEEE-CCEEEEEeCccCCCccCCc
Q 017349 171 FFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDT-WTTAAKLRMGL-ARY-DSAVM-GSKMYVTEGWTWPFMFSPR 245 (373)
Q Consensus 171 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~-~~~-~~~~~-~~~lyv~gG~~~~~~~~~~ 245 (373)
...+... +++.++.|+.+ ..+.+||..+.. |.....+..+. ... ..+.. ++.+++.|+.+ ..
T Consensus 99 v~~~~~~~~~~~l~~~~~d-------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d------g~ 165 (372)
T 1k8k_C 99 ARCVRWAPNEKKFAVGSGS-------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD------FK 165 (372)
T ss_dssp EEEEEECTTSSEEEEEETT-------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT------SC
T ss_pred eeEEEECCCCCEEEEEeCC-------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC------CC
Confidence 2222222 45666666654 246677766553 33222221111 111 12222 56677777665 57
Q ss_pred eEEEeCCCCc---------ee-------ecccCccCC-cceEEEEE--CCeEEEEeeCCCcceEEEeCCCCc
Q 017349 246 GGVYDINKDT---------WN-------LMSDGMKEG-WTGISIVL--EGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 246 i~~yd~~~~~---------W~-------~~~~~~~~~-~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
+..||..... |. .+.. .... ..-.++.+ +++.++.|+. ...+..||..+.+
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFE-SSSSCGWVHGVCFSANGSRVAWVSH-DSTVCLADADKKM 235 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE-CCCCSSCEEEEEECSSSSEEEEEET-TTEEEEEEGGGTT
T ss_pred EEEEEcccccccccccccccccccchhhheEe-cCCCCCeEEEEEECCCCCEEEEEeC-CCEEEEEECCCCc
Confidence 8889964221 11 1111 1111 11112233 5666666664 5679999987664
No 65
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.19 E-value=0.059 Score=46.88 Aligned_cols=191 Identities=6% Similarity=0.008 Sum_probs=97.9
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT 155 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~ 155 (373)
..+.+|+.... ...+.+||+.+++.......+. .....+....++.+|+.+.. ...++++|+.
T Consensus 8 ~~~~~~v~~~~----~~~v~~~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~-------~~~i~~~d~~ 70 (331)
T 3u4y_A 8 TSNFGIVVEQH----LRRISFFSTDTLEILNQITLGY------DFVDTAITSDCSNVVVTSDF-------CQTLVQIETQ 70 (331)
T ss_dssp CCCEEEEEEGG----GTEEEEEETTTCCEEEEEECCC------CEEEEEECSSSCEEEEEEST-------TCEEEEEECS
T ss_pred CCCEEEEEecC----CCeEEEEeCcccceeeeEEccC------CcceEEEcCCCCEEEEEeCC-------CCeEEEEECC
Confidence 46677877542 3468899999988765544331 11233333324458877653 2379999998
Q ss_pred CCce-e-ccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCE-
Q 017349 156 TNQW-Q-LASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSK- 229 (373)
Q Consensus 156 t~~W-~-~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~- 229 (373)
+++. . .+.....+. ++++.. +..+| .+... .....+.+||..+++-... ++.....+..+.. +|+
T Consensus 71 ~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~----~~~~~i~v~d~~~~~~~~~--~~~~~~~~~~~~spdg~~ 141 (331)
T 3u4y_A 71 LEPPKVVAIQEGQSSM--ADVDITPDDQFAV-TVTGL----NHPFNMQSYSFLKNKFIST--IPIPYDAVGIAISPNGNG 141 (331)
T ss_dssp SSSCEEEEEEECSSCC--CCEEECTTSSEEE-ECCCS----SSSCEEEEEETTTTEEEEE--EECCTTEEEEEECTTSSC
T ss_pred CCceeEEecccCCCCc--cceEECCCCCEEE-EecCC----CCcccEEEEECCCCCeEEE--EECCCCccceEECCCCCE
Confidence 8864 2 222111121 112222 34566 43221 1123799999998875433 2222222233333 554
Q ss_pred EEEEeCccCCCccCCc-eEEEeCCCCc-eeec-ccCccCCcceEEEEE--CCe-EEEEeeCCCcceEEEeCCCCce
Q 017349 230 MYVTEGWTWPFMFSPR-GGVYDINKDT-WNLM-SDGMKEGWTGISIVL--EGK-LFVISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 230 lyv~gG~~~~~~~~~~-i~~yd~~~~~-W~~~-~~~~~~~~~~~~~~~--~~~-l~v~gg~~~~~~~~yd~~~~~W 299 (373)
+|+.+... .. +.+|+...+. .... ....+.......+.+ +++ +|+.+. ....+.+||+++.+.
T Consensus 142 l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 142 LILIDRSS------ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANL-IGNSIGILETQNPEN 210 (331)
T ss_dssp EEEEEETT------TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEET-TTTEEEEEECSSTTS
T ss_pred EEEEecCC------CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeC-CCCeEEEEECCCCcc
Confidence 77765433 35 7777765432 1111 110111111122222 555 666653 356899999987765
No 66
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.19 E-value=8.7e-05 Score=63.23 Aligned_cols=44 Identities=18% Similarity=0.226 Sum_probs=40.5
Q ss_pred CCCCCChHHHHHhhccCCccchhhhhhhcHhHHhhccCchhhHh
Q 017349 26 LIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGFALC 69 (373)
Q Consensus 26 ~~~~LP~dl~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~~~~~ 69 (373)
.+..||+||+..||+.|+.+++.++..|||+|+.+..++.+.+.
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~ 47 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRY 47 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHH
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 46789999999999999999999999999999999999987643
No 67
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.18 E-value=0.08 Score=50.18 Aligned_cols=271 Identities=10% Similarity=-0.045 Sum_probs=128.6
Q ss_pred CCCCC---CCCChHHHHHhhccCCcc----chhhhhhhcHhHHhhccCchhhHhhhhccCCCCEEEEEEecCCCCceeEE
Q 017349 23 TQPLI---PGLPDEIGELCLLHVPYP----YQALVRSVSYSWNKAITDPGFALCKKSLSLSLPYLFIFSFHKPTARIQWQ 95 (373)
Q Consensus 23 ~~~~~---~~LP~dl~~~il~rlp~~----~l~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~l~~~gg~~~~~~~~~~ 95 (373)
.|+.+ ..|.++=+..+.++|-.. .-.....+.+.|..+.........-.......+.+|+.+.. ...+.
T Consensus 87 ~Mp~~~~~~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~p~~~~~vs~~~----d~~V~ 162 (543)
T 1nir_A 87 GMPNWGSSGELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKKQLNDLDLPNLFSVTLRD----AGQIA 162 (543)
T ss_dssp SCCCSTTTTSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCSSCCSCCCGGGEEEEEEGG----GTEEE
T ss_pred CCCCcccccCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCcccccccCCCCEEEEEEcC----CCeEE
Confidence 46666 579988777776555321 12233334455544431110000000011125577776542 34578
Q ss_pred EeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeC--CCCceeccCCCCCcceeee
Q 017349 96 ALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRA--TTNQWQLASPMLTPRSFFA 173 (373)
Q Consensus 96 ~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~--~t~~W~~~~~~~~~r~~~~ 173 (373)
++|..+.+....-... . ..++++....++.+|+.+. . +.+.+||. .+.+ .+..++.......
T Consensus 163 v~D~~t~~~~~~i~~g--~----~~~~v~~spdg~~l~v~~~------d--~~V~v~D~~~~t~~--~~~~i~~g~~p~~ 226 (543)
T 1nir_A 163 LVDGDSKKIVKVIDTG--Y----AVHISRMSASGRYLLVIGR------D--ARIDMIDLWAKEPT--KVAEIKIGIEARS 226 (543)
T ss_dssp EEETTTCCEEEEEECS--T----TEEEEEECTTSCEEEEEET------T--SEEEEEETTSSSCE--EEEEEECCSEEEE
T ss_pred EEECCCceEEEEEecC--c----ccceEEECCCCCEEEEECC------C--CeEEEEECcCCCCc--EEEEEecCCCcce
Confidence 8999888654322211 1 2244444443556776643 1 47999999 5543 2233333333333
Q ss_pred eeEe-----CCe-EEEEcCCCCCCCCcCceEEEEeCCCCeEEe-ccCCc--c------ccccccEEEE---CCEEEEEeC
Q 017349 174 SGNV-----NGK-IMAVGGTGANINETMTAVECYDPESDTWTT-AAKLR--M------GLARYDSAVM---GSKMYVTEG 235 (373)
Q Consensus 174 ~~~~-----~~~-iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~--~------~~~~~~~~~~---~~~lyv~gG 235 (373)
++.. +++ +|+. +.. ...+.++|..+.+-.. ++... . +......+.. ++.+|+...
T Consensus 227 va~sp~~~~dg~~l~v~-~~~------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 227 VESSKFKGYEDRYTIAG-AYW------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp EEECCSTTCTTTEEEEE-EEE------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred EEeCCCcCCCCCEEEEE-Ecc------CCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 4433 444 5544 331 2468889988775332 22111 0 0001122222 345555443
Q ss_pred ccCCCccCCceEEEeCCCCceeeccc-CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeec---CCCCCCcc
Q 017349 236 WTWPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVG---GDKFPCEV 311 (373)
Q Consensus 236 ~~~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~---~~~~~~~~ 311 (373)
.+ ..+..+|..+.+-..+.. +.....+..+..-+++.+++++...+.+.++|.++++-...- ..|.+
T Consensus 300 ~~------g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~--- 370 (543)
T 1nir_A 300 ET------GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP--- 370 (543)
T ss_dssp TT------TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCC---
T ss_pred CC------CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCC---
Confidence 32 578899987754221111 111111122222356644444444568999999988654422 12333
Q ss_pred cccceEEEEe-CCEEEEEeC
Q 017349 312 MHRPFAVNGV-EGKIYVVSS 330 (373)
Q Consensus 312 ~~~~~~~~~~-~~~l~i~GG 330 (373)
.....++.- ++.+|+.+.
T Consensus 371 -g~g~~~~~p~~g~~~~s~~ 389 (543)
T 1nir_A 371 -GRGANFVHPKYGPVWSTSH 389 (543)
T ss_dssp -TTCEEEEETTTEEEEEEEB
T ss_pred -CCCcccCCCCCccEEEecc
Confidence 223333333 377887764
No 68
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.16 E-value=0.012 Score=52.26 Aligned_cols=181 Identities=7% Similarity=-0.001 Sum_probs=89.1
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce-e
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS-F 171 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~-~ 171 (373)
.+.++|..+++-.......... ......+..+..++..++.|+.++ .+.+||..+++-... +..... -
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~--H~~~V~~v~~spdg~~l~sgs~d~-------~i~iwd~~~~~~~~~--~~~h~~~V 172 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYE--HDDIVSTVSVLSSGTQAVSGSKDI-------CIKVWDLAQQVVLSS--YRAHAAQV 172 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEEC--CSSCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTEEEEE--ECCCSSCE
T ss_pred EEEEEeccCCCceeEeeccccC--CCCCEEEEEECCCCCEEEEEeCCC-------eEEEEECCCCcEEEE--EcCcCCce
Confidence 4777888776532221111000 001233344445777777777522 588999988753221 111111 1
Q ss_pred eeeeE-e-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccc-cEEEE--CCEEEEEeCccCCCccCCce
Q 017349 172 FASGN-V-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARY-DSAVM--GSKMYVTEGWTWPFMFSPRG 246 (373)
Q Consensus 172 ~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~-~~~~~--~~~lyv~gG~~~~~~~~~~i 246 (373)
..+.. . +..+++.|+.+ ..+.+||..+.+-...-......... +.+.. ++++++.|+.+ ..+
T Consensus 173 ~~~~~~~~~~~~l~s~s~D-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d------g~v 239 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSED-------NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN------GTV 239 (344)
T ss_dssp EEEEECSSCTTEEEEEETT-------SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT------SEE
T ss_pred EEEEecCCCCCceeeeccc-------cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC------CcE
Confidence 12222 1 34577777665 35889999877533221111111111 12222 45677777765 578
Q ss_pred EEEeCCCCcee-ecccCccCCcceEEEEE--CC-eEEEEeeCCCcceEEEeCCCCceee
Q 017349 247 GVYDINKDTWN-LMSDGMKEGWTGISIVL--EG-KLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 247 ~~yd~~~~~W~-~~~~~~~~~~~~~~~~~--~~-~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
.+||..+++=. .+.. ... .. .++.+ ++ ++++.|+. ...+.+||..+++-..
T Consensus 240 ~~wd~~~~~~~~~~~~-h~~-~v-~~v~fsp~g~~~lasgs~-D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 240 SLVDTKSTSCVLSSAV-HSQ-CV-TGLVFSPHSVPFLASLSE-DCSLAVLDSSLSELFR 294 (344)
T ss_dssp EEEESCC--CCEEEEC-CSS-CE-EEEEECSSSSCCEEEEET-TSCEEEECTTCCEEEE
T ss_pred EEEECCCCcEEEEEcC-CCC-CE-EEEEEccCCCeEEEEEeC-CCeEEEEECCCCcEEE
Confidence 89999876421 1111 111 11 12333 34 45555654 5689999998775443
No 69
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.15 E-value=0.052 Score=49.00 Aligned_cols=179 Identities=10% Similarity=0.049 Sum_probs=95.3
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.+||..+.+.......... ....+.....++..+++|+.+ ..+.+||..+++.... +.......
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~-----~~v~~v~~s~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~--~~~~~~~v 179 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDES-----TYVASVKWSHDGSFLSVGLGN-------GLVDIYDVESQTKLRT--MAGHQARV 179 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTT-----CCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEEEE--ECCCSSCE
T ss_pred eEEEeeCCCCcEeEeeecCCC-----CCEEEEEECCCCCEEEEECCC-------CeEEEEECcCCeEEEE--ecCCCCce
Confidence 488899988877655444311 223344444466677776652 2688999887754322 11112222
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEe
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYD 250 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd 250 (373)
....+++++++.|+.+ ..+.+||..+..-. +..+.........+.. ++.+++.|+.+ ..+.+||
T Consensus 180 ~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------~~v~iwd 245 (401)
T 4aez_A 180 GCLSWNRHVLSSGSRS-------GAIHHHDVRIANHQ-IGTLQGHSSEVCGLAWRSDGLQLASGGND------NVVQIWD 245 (401)
T ss_dssp EEEEEETTEEEEEETT-------SEEEEEETTSSSCE-EEEEECCSSCEEEEEECTTSSEEEEEETT------SCEEEEE
T ss_pred EEEEECCCEEEEEcCC-------CCEEEEecccCcce-eeEEcCCCCCeeEEEEcCCCCEEEEEeCC------CeEEEcc
Confidence 2333466677777664 46888988743211 1111111111112222 66777777765 5789999
Q ss_pred CCCCceeecccCccCCcceEEEEE--CCeEEEEee-CCCcceEEEeCCCCcee
Q 017349 251 INKDTWNLMSDGMKEGWTGISIVL--EGKLFVISE-HGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 251 ~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg-~~~~~~~~yd~~~~~W~ 300 (373)
..+..-...-........ ..+.. +..+++.|+ .....+..||..+++-.
T Consensus 246 ~~~~~~~~~~~~~~~~v~-~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 246 ARSSIPKFTKTNHNAAVK-AVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp TTCSSEEEEECCCSSCCC-EEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred CCCCCccEEecCCcceEE-EEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 987543221111111111 11222 456777764 33668999999876543
No 70
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.14 E-value=0.034 Score=47.26 Aligned_cols=142 Identities=11% Similarity=0.048 Sum_probs=84.5
Q ss_pred eeeeEeC-CeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEe
Q 017349 172 FASGNVN-GKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYD 250 (373)
Q Consensus 172 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd 250 (373)
++++... +.+|+..|.. ..+.+.++|+.+++=...-+++...+..+.+..+++||+..-.. +.+.+||
T Consensus 24 ~Gl~~~~dg~Lyvstg~~-----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~------~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY-----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK------NIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECST-----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC------SEEEEEE
T ss_pred ccEEEeCCCeEEEECCCC-----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC------CEEEEEE
Confidence 5566555 7999987642 13579999999997544333333334445666788999997544 6899999
Q ss_pred CCCCce-eecccCccCCcceEEEEE-CCeEEEEeeCCCcceEEEeCCCCcee-eecCCCCCCcccccceEEEEeCCEEEE
Q 017349 251 INKDTW-NLMSDGMKEGWTGISIVL-EGKLFVISEHGDCPMKQYNPDDDTWR-YVGGDKFPCEVMHRPFAVNGVEGKIYV 327 (373)
Q Consensus 251 ~~~~~W-~~~~~~~~~~~~~~~~~~-~~~l~v~gg~~~~~~~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~~~~~~l~i 327 (373)
+++.+= ..++.+.+. +..... ++++|+..| .+.+.++|+++.+-. .+..-..+.+ ......+...+++||+
T Consensus 93 ~~t~~v~~~i~~g~~~---g~glt~Dg~~l~vs~g--s~~l~viD~~t~~v~~~I~Vg~~~~p-~~~~nele~~dg~lyv 166 (266)
T 2iwa_A 93 RRTLSNIKNFTHQMKD---GWGLATDGKILYGSDG--TSILYEIDPHTFKLIKKHNVKYNGHR-VIRLNELEYINGEVWA 166 (266)
T ss_dssp TTTTEEEEEEECCSSS---CCEEEECSSSEEEECS--SSEEEEECTTTCCEEEEEECEETTEE-CCCEEEEEEETTEEEE
T ss_pred CCCCcEEEEEECCCCC---eEEEEECCCEEEEECC--CCeEEEEECCCCcEEEEEEECCCCcc-cccceeEEEECCEEEE
Confidence 987653 223222122 222333 567888765 569999999876433 2221001100 0122344444888887
Q ss_pred EeC
Q 017349 328 VSS 330 (373)
Q Consensus 328 ~GG 330 (373)
--.
T Consensus 167 n~~ 169 (266)
T 2iwa_A 167 NIW 169 (266)
T ss_dssp EET
T ss_pred ecC
Confidence 654
No 71
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.13 E-value=0.048 Score=49.06 Aligned_cols=152 Identities=9% Similarity=0.022 Sum_probs=75.6
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcc--------------eeeeeeEeCCeEEEEcCCC
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPR--------------SFFASGNVNGKIMAVGGTG 188 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r--------------~~~~~~~~~~~iyv~GG~~ 188 (373)
+.....++..++.++.+ ..+.+||..+++....-...... ....+....+..++.|+.+
T Consensus 154 ~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (425)
T 1r5m_A 154 SVKWNKDGTHIISMDVE-------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK 226 (425)
T ss_dssp EEEECTTSSEEEEEETT-------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG
T ss_pred EEEECCCCCEEEEEecC-------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC
Confidence 33333356556666542 25888998877543321111111 0222233334445666654
Q ss_pred CCCCCcCceEEEEeCCCCeEEeccCCcccccc-ccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCC
Q 017349 189 ANINETMTAVECYDPESDTWTTAAKLRMGLAR-YDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEG 266 (373)
Q Consensus 189 ~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~ 266 (373)
..+.+||..+.+-... +...... ...+.. ++++++.|+.+ ..+.+||..+++-...-......
T Consensus 227 -------g~i~~~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~ 291 (425)
T 1r5m_A 227 -------GAIFVYQITEKTPTGK--LIGHHGPISVLEFNDTNKLLLSASDD------GTLRIWHGGNGNSQNCFYGHSQS 291 (425)
T ss_dssp -------GCEEEEETTCSSCSEE--ECCCSSCEEEEEEETTTTEEEEEETT------SCEEEECSSSBSCSEEECCCSSC
T ss_pred -------CeEEEEEcCCCceeee--eccCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCccceEecCCCcc
Confidence 3588999887642111 1111111 122222 56666677655 57899998876532221111111
Q ss_pred cceEEEEE-CCeEEEEeeCCCcceEEEeCCCCce
Q 017349 267 WTGISIVL-EGKLFVISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 267 ~~~~~~~~-~~~l~v~gg~~~~~~~~yd~~~~~W 299 (373)
....... ++ +++.++. ...+.+||..+.+-
T Consensus 292 -i~~~~~~~~~-~l~~~~~-d~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 292 -IVSASWVGDD-KVISCSM-DGSVRLWSLKQNTL 322 (425)
T ss_dssp -EEEEEEETTT-EEEEEET-TSEEEEEETTTTEE
T ss_pred -EEEEEECCCC-EEEEEeC-CCcEEEEECCCCcE
Confidence 1122333 45 5555554 66899999977643
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.12 E-value=0.063 Score=47.40 Aligned_cols=186 Identities=10% Similarity=0.109 Sum_probs=91.3
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCc-eeccCCCCC--cc
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQ-WQLASPMLT--PR 169 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~--~r 169 (373)
.+.+||..+.++.....+... .....+..+..++..++.|+.+ ..+.+||..++. |........ ..
T Consensus 75 ~i~vwd~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d-------~~v~i~d~~~~~~~~~~~~~~~~~~~ 143 (372)
T 1k8k_C 75 NAYVWTLKGRTWKPTLVILRI----NRAARCVRWAPNEKKFAVGSGS-------RVISICYFEQENDWWVCKHIKKPIRS 143 (372)
T ss_dssp CEEEEEEETTEEEEEEECCCC----SSCEEEEEECTTSSEEEEEETT-------SSEEEEEEETTTTEEEEEEECTTCCS
T ss_pred eEEEEECCCCeeeeeEEeecC----CCceeEEEECCCCCEEEEEeCC-------CEEEEEEecCCCcceeeeeeecccCC
Confidence 477788877765544322211 1223334444466666666642 246677766553 322221111 11
Q ss_pred eeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCe---------E-------EeccCCccccccccEEEE--CCEE
Q 017349 170 SFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDT---------W-------TTAAKLRMGLARYDSAVM--GSKM 230 (373)
Q Consensus 170 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~---------W-------~~~~~~~~~~~~~~~~~~--~~~l 230 (373)
.-..+... +++.++.|+.+ ..+.+||..... | +.+..+.........+.+ ++.+
T Consensus 144 ~i~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 216 (372)
T 1k8k_C 144 TVLSLDWHPNSVLLAAGSCD-------FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR 216 (372)
T ss_dssp CEEEEEECTTSSEEEEEETT-------SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE
T ss_pred CeeEEEEcCCCCEEEEEcCC-------CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCE
Confidence 11222222 56667777654 357788854211 1 111111111111112222 5666
Q ss_pred EEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCC--CceeeecC
Q 017349 231 YVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDD--DTWRYVGG 304 (373)
Q Consensus 231 yv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~--~~W~~~~~ 304 (373)
++.|+.+ ..+.+||..+++-...-..........+..-++++++.| ....+..||... ++|..+..
T Consensus 217 l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~i~~~~~~~~~~~~~~~ 284 (372)
T 1k8k_C 217 VAWVSHD------STVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG--HDCFPVLFTYDSAAGKLSFGGR 284 (372)
T ss_dssp EEEEETT------TEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE--TTSSCEEEEEETTTTEEEECCC
T ss_pred EEEEeCC------CEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE--eCCeEEEEEccCcCceEEEeec
Confidence 6666655 578999998765322111111122222234477766666 356888888877 88877644
No 73
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.11 E-value=0.069 Score=46.67 Aligned_cols=175 Identities=14% Similarity=0.202 Sum_probs=90.2
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.++|..+.+-...-... +. .... .....++..++.|+.+ ..+.+||..+++-...-... .....
T Consensus 103 ~i~lWd~~~~~~~~~~~~~-~~----~~~~-~~~spdg~~l~~g~~d-------g~v~i~~~~~~~~~~~~~~~-~~~v~ 168 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAG-PV----DAWT-LAFSPDSQYLATGTHV-------GKVNIFGVESGKKEYSLDTR-GKFIL 168 (321)
T ss_dssp EEEEEETTTTEEEEEEECC-TT----CCCC-EEECTTSSEEEEECTT-------SEEEEEETTTCSEEEEEECS-SSCEE
T ss_pred cEEEEECCCCCEEEEEeCC-Cc----cEEE-EEECCCCCEEEEEcCC-------CcEEEEEcCCCceeEEecCC-CceEE
Confidence 4677888776432211111 00 1122 2333366777777652 26888888776432211111 11111
Q ss_pred eeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccc-cEEE-ECCEEEEEeCccCCCccCCceEEE
Q 017349 173 ASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARY-DSAV-MGSKMYVTEGWTWPFMFSPRGGVY 249 (373)
Q Consensus 173 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~-~~~~-~~~~lyv~gG~~~~~~~~~~i~~y 249 (373)
+++. -+++.++.|+.+ ..+.+||..+++-... +......- +.+. -++++++.|+.+ ..+.+|
T Consensus 169 ~~~~spdg~~lasg~~d-------g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~d------g~i~iw 233 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAID-------GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDD------GYIKIY 233 (321)
T ss_dssp EEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTT------SCEEEE
T ss_pred EEEECCCCCEEEEEcCC-------CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCC------CeEEEE
Confidence 2222 256777777664 3588999988753221 11111111 1222 267777788766 578999
Q ss_pred eCCCCceeecccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCce
Q 017349 250 DINKDTWNLMSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 250 d~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W 299 (373)
|..+..-...-..... .. ..+.+ +++.++.|+. ...+.+||..+.+-
T Consensus 234 d~~~~~~~~~~~~h~~-~v-~~~~~sp~~~~l~s~s~-D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 234 DVQHANLAGTLSGHAS-WV-LNVAFCPDDTHFVSSSS-DKSVKVWDVGTRTC 282 (321)
T ss_dssp ETTTCCEEEEECCCSS-CE-EEEEECTTSSEEEEEET-TSCEEEEETTTTEE
T ss_pred ECCCcceeEEEcCCCC-ce-EEEEECCCCCEEEEEeC-CCcEEEEeCCCCEE
Confidence 9987654322110111 11 11222 5677777665 56899999876643
No 74
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.11 E-value=0.091 Score=44.74 Aligned_cols=178 Identities=12% Similarity=0.094 Sum_probs=94.4
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCC----CcceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEE
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPML----TPRSFFASGN--VNGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~----~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
.++.+|+.... ...+.+||+..+....+.... .......++. -++++|+.+... ...+.+|
T Consensus 39 ~~g~l~v~~~~-------~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~------~~~i~~~ 105 (286)
T 1q7f_A 39 AQNDIIVADTN-------NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP------THQIQIY 105 (286)
T ss_dssp TTCCEEEEEGG-------GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG------GCEEEEE
T ss_pred CCCCEEEEECC-------CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC------CCEEEEE
Confidence 36788887543 236899998755433333211 1112234444 367899886421 2468899
Q ss_pred eCCCCeEEeccCCccccccccEEE-ECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEE--ECCeE
Q 017349 202 DPESDTWTTAAKLRMGLARYDSAV-MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIV--LEGKL 278 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l 278 (373)
|+....-+.+..... ......++ -+|++|+..... ..+.+||+.......+.... .......+. -+|++
T Consensus 106 d~~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 106 NQYGQFVRKFGATIL-QHPRGVTVDNKGRIIVVECKV------MRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQEI 177 (286)
T ss_dssp CTTSCEEEEECTTTC-SCEEEEEECTTSCEEEEETTT------TEEEEECTTSCEEEEEECTT-TCSSEEEEEECSSSEE
T ss_pred CCCCcEEEEecCccC-CCceEEEEeCCCCEEEEECCC------CEEEEEcCCCCEEEEeCCCC-ccCCcEEEEECCCCCE
Confidence 965544333322111 11122232 267888876543 57899998655444433211 111112233 35888
Q ss_pred EEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEE-eCCEEEEEeCC
Q 017349 279 FVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNG-VEGKIYVVSSG 331 (373)
Q Consensus 279 ~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~GG~ 331 (373)
|+.+.. ...+.+||++.+....+.... ......+++. -+|+||+....
T Consensus 178 ~v~~~~-~~~i~~~~~~g~~~~~~~~~g----~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 178 FISDNR-AHCVKVFNYEGQYLRQIGGEG----ITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp EEEEGG-GTEEEEEETTCCEEEEESCTT----TSCSEEEEEECTTCCEEEEECS
T ss_pred EEEECC-CCEEEEEcCCCCEEEEEccCC----ccCCCcEEEECCCCCEEEEeCC
Confidence 887643 558999998765444443211 0122344444 36788888754
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.08 E-value=0.046 Score=49.32 Aligned_cols=159 Identities=11% Similarity=0.171 Sum_probs=79.8
Q ss_pred EEeccCC-EEEEEcCccCCCCCCcceeEEEeCCCCceeccCC-CCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEE
Q 017349 124 TSLPRQG-KLFVLGGMRSDTETPMQSTIMYRATTNQWQLASP-MLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVEC 200 (373)
Q Consensus 124 ~~~~~~~-~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~-~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~ 200 (373)
.....++ .+++.|+.+ ..+.+||..+++....-. .........+... ++.+++.|+.+ ..+.+
T Consensus 137 ~~~~p~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~i 202 (402)
T 2aq5_A 137 VAWHPTAQNVLLSAGCD-------NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------KRVRV 202 (402)
T ss_dssp EEECSSBTTEEEEEETT-------SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------SEEEE
T ss_pred EEECcCCCCEEEEEcCC-------CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------CcEEE
Confidence 3333343 577776652 268999998875432210 1111112222222 56666666654 46899
Q ss_pred EeCCCCeEEecc-CCccccccccEEE-ECCEEEEEe---CccCCCccCCceEEEeCCCCce--eecccCccCCcceEEEE
Q 017349 201 YDPESDTWTTAA-KLRMGLARYDSAV-MGSKMYVTE---GWTWPFMFSPRGGVYDINKDTW--NLMSDGMKEGWTGISIV 273 (373)
Q Consensus 201 yd~~t~~W~~~~-~~~~~~~~~~~~~-~~~~lyv~g---G~~~~~~~~~~i~~yd~~~~~W--~~~~~~~~~~~~~~~~~ 273 (373)
||+.+++-...- ..........++. -++++++.| +.+ ..+.+||..+..- ..............+..
T Consensus 203 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 276 (402)
T 2aq5_A 203 IEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSE------RQVALWDTKHLEEPLSLQELDTSSGVLLPFFD 276 (402)
T ss_dssp EETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCC------EEEEEEETTBCSSCSEEEECCCCSSCEEEEEE
T ss_pred EeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCC------ceEEEEcCccccCCceEEeccCCCceeEEEEc
Confidence 999887643221 1111111112222 367777776 333 5789999987542 11111111111111122
Q ss_pred ECCeEE-EEeeCCCcceEEEeCCCCc--eeeec
Q 017349 274 LEGKLF-VISEHGDCPMKQYNPDDDT--WRYVG 303 (373)
Q Consensus 274 ~~~~l~-v~gg~~~~~~~~yd~~~~~--W~~~~ 303 (373)
-+++.+ +.|+ ....+..||..+++ ...+.
T Consensus 277 ~~~~~l~~~g~-~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 277 PDTNIVYLCGK-GDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp TTTTEEEEEET-TCSCEEEEEECSSTTCEEEEE
T ss_pred CCCCEEEEEEc-CCCeEEEEEecCCCcceEeec
Confidence 244444 4553 35688999988765 44444
No 76
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.01 E-value=0.098 Score=52.05 Aligned_cols=203 Identities=9% Similarity=0.107 Sum_probs=109.7
Q ss_pred EEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCC----CCcc
Q 017349 94 WQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPM----LTPR 169 (373)
Q Consensus 94 ~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~----~~~r 169 (373)
+..||+.++++..+.... +. .......+.....++.|++... ..+++||+.+++|+..... ..+.
T Consensus 429 l~~~d~~~~~~~~~~~~~-~~-l~~~~v~~i~~d~~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 497 (795)
T 4a2l_A 429 LSILHRNSGQVENFNQRN-SQ-LVNENVYAILPDGEGNLWLGTL---------SALVRFNPEQRSFTTIEKEKDGTPVVS 497 (795)
T ss_dssp EEEEETTTCCEEEECTTT-SC-CSCSCEEEEEECSSSCEEEEES---------SCEEEEETTTTEEEECCBCTTCCBCCC
T ss_pred eeEEeCCCCcEEEeecCC-CC-cCCCeeEEEEECCCCCEEEEec---------CceeEEeCCCCeEEEccccccccccCC
Confidence 678888888877764321 11 0111222222333677887532 2589999999999876532 1111
Q ss_pred e-eeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCC---c-cccccccEEEE--CCEEEEEeCccCCCc
Q 017349 170 S-FFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKL---R-MGLARYDSAVM--GSKMYVTEGWTWPFM 241 (373)
Q Consensus 170 ~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~---~-~~~~~~~~~~~--~~~lyv~gG~~~~~~ 241 (373)
. ..++.. -++.||+... . .+.+||+.++++ ..... . .+.....+... +|.|++...
T Consensus 498 ~~i~~i~~d~~g~lWigt~-~--------Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~------ 561 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE-E--------GLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR------ 561 (795)
T ss_dssp CCEEEEEECTTCCEEEEES-S--------CEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES------
T ss_pred ceEEEEEECCCCCEEEEeC-C--------ceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC------
Confidence 1 112222 2567887543 2 388999998888 43211 1 11111112222 577776432
Q ss_pred cCCceEEEeCCCCceeeccc--CccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecC-CCCCCcccccce
Q 017349 242 FSPRGGVYDINKDTWNLMSD--GMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGG-DKFPCEVMHRPF 316 (373)
Q Consensus 242 ~~~~i~~yd~~~~~W~~~~~--~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~~~ 316 (373)
..+.+||+.+++++.... .++..... ++.. +|+|++.+. ..+.+||++++++..... -.++... ....
T Consensus 562 --~Gl~~~d~~~~~~~~~~~~~gl~~~~i~-~i~~d~~g~lWi~t~---~Gl~~~~~~~~~~~~~~~~dGl~~~~-f~~~ 634 (795)
T 4a2l_A 562 --EGFYCFNEKDKQIKRYNTTNGLPNNVVY-GILEDSFGRLWLSTN---RGISCFNPETEKFRNFTESDGLQSNQ-FNTA 634 (795)
T ss_dssp --SCEEEEETTTTEEEEECGGGTCSCSCEE-EEEECTTSCEEEEET---TEEEEEETTTTEEEEECGGGTCSCSC-EEEE
T ss_pred --CCceeECCCCCcEEEeCCCCCCchhheE-EEEECCCCCEEEEcC---CceEEEcCCCCcEEEcCCcCCCcccc-CccC
Confidence 258999999998877543 22222222 2333 577887653 378999999998887643 1222111 1112
Q ss_pred EEEE-eCCEEEEEeC
Q 017349 317 AVNG-VEGKIYVVSS 330 (373)
Q Consensus 317 ~~~~-~~~~l~i~GG 330 (373)
+++. -+|+||+-|-
T Consensus 635 ~~~~~~~G~l~~g~~ 649 (795)
T 4a2l_A 635 SYCRTSVGQMYFGGI 649 (795)
T ss_dssp EEEECTTSCEEEEET
T ss_pred ceeECCCCeEEEecC
Confidence 3333 3567776554
No 77
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.00 E-value=0.13 Score=43.72 Aligned_cols=173 Identities=9% Similarity=0.022 Sum_probs=93.8
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
.++.||+.... ...+.+||+. ++..............+++.. ++.+|+..... ..+.+||+. +
T Consensus 29 ~~g~l~v~~~~-------~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-------~~v~~~d~~-g 92 (300)
T 2qc5_A 29 EDGKVWFTQHK-------ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGA-------NKIGKLSKK-G 92 (300)
T ss_dssp TTSCEEEEETT-------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTT-------TEEEEECTT-S
T ss_pred CCCCEEEEcCC-------CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCC-------CeEEEECCC-C
Confidence 37889987532 2378999988 666543221111222333332 57788865322 358899988 6
Q ss_pred eEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEE--ECCeEEEEee
Q 017349 207 TWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIV--LEGKLFVISE 283 (373)
Q Consensus 207 ~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~v~gg 283 (373)
+++..........-...+.. +|++|+..... ..+.+||++ ++......+... .....+. -+++||+...
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~~~~~~-~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYDLPNKG-SYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEECSSTT-CCEEEEEECTTSSEEEEET
T ss_pred CeEEecCCCCCCCCccceECCCCCEEEEccCC------CeEEEECCC-CCEEEccCCCCC-CCceeEEECCCCCEEEEec
Confidence 66544211111111223332 67888875432 478999997 666544321111 1112233 3577888653
Q ss_pred CCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEe-CCEEEEEeC
Q 017349 284 HGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGV-EGKIYVVSS 330 (373)
Q Consensus 284 ~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~l~i~GG 330 (373)
. ...+.+||+ +++...+.. +.. .....+++.. ++.||+...
T Consensus 165 ~-~~~i~~~~~-~g~~~~~~~-~~~---~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 165 Q-NNSIGRITN-TGKLEEYPL-PTN---AAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp T-TTEEEEECT-TCCEEEEEC-SST---TCCEEEEEECTTSSEEEEET
T ss_pred C-CCeEEEECC-CCcEEEeeC-CCC---CCCcceEEECCCCCEEEEcc
Confidence 2 457999999 666665532 211 1223444433 577888764
No 78
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.00 E-value=0.007 Score=54.07 Aligned_cols=211 Identities=12% Similarity=0.102 Sum_probs=97.8
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCc-eeccCCCCCccee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQ-WQLASPMLTPRSF 171 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~r~~ 171 (373)
.+.+||..++.|..+..+.... ....+..+..++..++.|+.+ ..+.+||..++. |.....+......
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~----~~v~~~~~s~~~~~l~s~s~d-------~~v~vwd~~~~~~~~~~~~~~~~~~~ 102 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHD----KIVTCVDWAPKSNRIVTCSQD-------RNAYVYEKRPDGTWKQTLVLLRLNRA 102 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCS----SCEEEEEECTTTCCEEEEETT-------SSEEEC------CCCCEEECCCCSSC
T ss_pred EEEEEEccCCceEEEEEEecCC----ceEEEEEEeCCCCEEEEEeCC-------CeEEEEEcCCCCceeeeeEecccCCc
Confidence 4667888888777766655211 233444444467777777652 258899988876 5544333221111
Q ss_pred -eeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCe-EEeccCCcc-ccccccEEEE--CCEEEEEeCccCCCccCCc
Q 017349 172 -FASGNV-NGKIMAVGGTGANINETMTAVECYDPESDT-WTTAAKLRM-GLARYDSAVM--GSKMYVTEGWTWPFMFSPR 245 (373)
Q Consensus 172 -~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~-~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~ 245 (373)
..+... ++++++.|+.+ ..+.+||..+++ |..+..+.. .......+.+ ++++++.|+.+ ..
T Consensus 103 v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------~~ 169 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGA-------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD------RK 169 (377)
T ss_dssp EEEEECCTTSSCCEEEESS-------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS------SC
T ss_pred eEEEEECCCCCEEEEEecC-------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC------CE
Confidence 222222 45666666654 347888887764 433333332 1111112222 56777777765 56
Q ss_pred eEEEeCCCCceeeccc---------------CccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCce--eeecCCC
Q 017349 246 GGVYDINKDTWNLMSD---------------GMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTW--RYVGGDK 306 (373)
Q Consensus 246 i~~yd~~~~~W~~~~~---------------~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W--~~~~~~~ 306 (373)
+..||..+........ .......-.++.+ ++++++.|+. ...+..||..+.+- ..+..+.
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~ 248 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH-DSSVTIAYPSAPEQPPRALITVK 248 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET-TTEEC-CEECSTTSCEEECCCEE
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC-CCcEEEEECCCCCCcceeeEeec
Confidence 8889986443221110 0100000111222 6666666664 56788888876643 1122111
Q ss_pred CCCcccccceEEEEeCCEEEEEeC
Q 017349 307 FPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
.. ...........++++++.|+
T Consensus 249 ~~--~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 249 LS--QLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp CS--SSCEEEEEEEETTEEEEEES
T ss_pred CC--CCceEEEEEcCCCCEEEEEc
Confidence 11 00111222345788777775
No 79
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.02 Score=56.74 Aligned_cols=179 Identities=9% Similarity=0.138 Sum_probs=93.1
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccC--CEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQ--GKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS 170 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 170 (373)
.+.+||...+++..+..+.... ....+.....+ +..++.|+.+ ..+.+||..+++|..+..+.....
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~----~~V~~l~~s~~~~~~~l~s~s~D-------g~I~vwd~~~~~~~~~~~~~~h~~ 100 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHE----GPVWRVDWAHPKFGTILASCSYD-------GKVLIWKEENGRWSQIAVHAVHSA 100 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCS----SCEEEEEECCTTSCSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSS
T ss_pred cEEEEecCCCCCccceeccCCc----CceEEEEecCCCCCCEEEEEeCC-------CeEEEEECCCCcccccccccCCCC
Confidence 4677887766665554443111 22333333233 6677777652 268899998888766554432222
Q ss_pred eeeeeEe--C--CeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccccc-EEEE--------------CCEEE
Q 017349 171 FFASGNV--N--GKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYD-SAVM--------------GSKMY 231 (373)
Q Consensus 171 ~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~-~~~~--------------~~~ly 231 (373)
....+.+ + +.+++.|+.+ ..+.+||..++.-.....+........ .... ++.++
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~d-------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l 173 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETT-------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCE
T ss_pred CeEEEEECCCCCCCEEEEEeCC-------CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEE
Confidence 2222222 2 6677777765 368888887763211111111111111 1111 35666
Q ss_pred EEeCccCCCccCCceEEEeCCCCc--eeecccCccCCcc-eEEEEE--C---CeEEEEeeCCCcceEEEeCCCC
Q 017349 232 VTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKEGWT-GISIVL--E---GKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 232 v~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~~-~~~~~~--~---~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
+.|+.+ ..+..||..++. +..... ...... -.++.+ + +++++.|+. ...+..||..+.
T Consensus 174 ~sgs~d------g~I~iwd~~~~~~~~~~~~~-~~~h~~~V~~l~~sp~~~~~~~l~s~s~-Dg~I~iwd~~~~ 239 (753)
T 3jro_A 174 VTGGAD------NLVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWSPTVLLRSYLASVSQ-DRTCIIWTQDNE 239 (753)
T ss_dssp EEEETT------SCEEEEEEETTTTEEEEEEE-ECCCSSCEEEEEECCCCSSSEEEEEEES-SSCEEEEEESSS
T ss_pred EEEECC------CeEEEEeccCCcccceeeee-ecCCCCcEEEEEeccCCCCCCEEEEEec-CCEEEEecCCCC
Confidence 777665 568888887653 333322 111111 112222 3 677777775 567888888765
No 80
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.97 E-value=0.015 Score=51.27 Aligned_cols=189 Identities=10% Similarity=0.054 Sum_probs=92.5
Q ss_pred ceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCC-cc
Q 017349 91 RIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLT-PR 169 (373)
Q Consensus 91 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~-~r 169 (373)
...++.+|..+.++..+....... .-... ++..+++||+.+... ....+++||..+++++.+..... ..
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~~~----~p~~~-a~spdg~l~~~~~~~-----~~~~v~~~~~~~g~~~~~~~~~~~~~ 86 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAATQ----NPTYL-ALSAKDCLYSVDKED-----DEGGIAAWQIDGQTAHKLNTVVAPGT 86 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEECS----CCCCE-EECTTCEEEEEEEET-----TEEEEEEEEEETTEEEEEEEEEEESC
T ss_pred CEEEEEEcCCCCeEEEeeeeeccC----CcceE-EEccCCeEEEEEecC-----CCceEEEEEecCCcEEEeeeeecCCC
Confidence 345677888888776543222110 11122 333477787765321 13478999998887766654321 11
Q ss_pred eeeeeeE-eCC-eEEEEcCCCCCCCCcCceEEEEeCC-CCeEEeccCCcc------ccc----cccEEEE-CCEEEEEeC
Q 017349 170 SFFASGN-VNG-KIMAVGGTGANINETMTAVECYDPE-SDTWTTAAKLRM------GLA----RYDSAVM-GSKMYVTEG 235 (373)
Q Consensus 170 ~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~yd~~-t~~W~~~~~~~~------~~~----~~~~~~~-~~~lyv~gG 235 (373)
....++. -++ .||+.+..+ ..+.+||.. +++.+.+..+.. ++. .+..+.. +|++|+.+.
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~-------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~ 159 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHK-------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL 159 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTT-------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET
T ss_pred CCEEEEECCCCCEEEEEeCCC-------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC
Confidence 1222332 244 566654322 357788874 334333322111 110 1112222 677777654
Q ss_pred ccCCCccCCceEEEeCC-CCceeeccc-CccCC--cceEEEEECCe-EEEEeeCCCcceEEEeCC--CCceeeec
Q 017349 236 WTWPFMFSPRGGVYDIN-KDTWNLMSD-GMKEG--WTGISIVLEGK-LFVISEHGDCPMKQYNPD--DDTWRYVG 303 (373)
Q Consensus 236 ~~~~~~~~~~i~~yd~~-~~~W~~~~~-~~~~~--~~~~~~~~~~~-l~v~gg~~~~~~~~yd~~--~~~W~~~~ 303 (373)
.. ..+.+||+. +++...+.. ..+.+ -...+..-+|+ +|+.+.. ...+.+|+.+ +++++.+.
T Consensus 160 ~~------~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~-~~~v~v~~~~~~~g~~~~~~ 227 (347)
T 3hfq_A 160 GS------DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL-SSQIASLKYDTQTGAFTQLG 227 (347)
T ss_dssp TT------TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-TTEEEEEEEETTTTEEEEEE
T ss_pred CC------CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC-CCEEEEEEecCCCCceEEee
Confidence 33 478899988 565554322 11111 11112222565 6665433 4456666554 56665443
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.95 E-value=0.11 Score=46.84 Aligned_cols=206 Identities=12% Similarity=0.029 Sum_probs=99.3
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.+||..+.+....-... .....+... ++.+++.|+.+ ..+.+||..+..-....-......-.
T Consensus 157 ~i~iwd~~~~~~~~~~~~~------~~~v~~~~~--~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~v~ 221 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMAGH------QARVGCLSW--NRHVLSSGSRS-------GAIHHHDVRIANHQIGTLQGHSSEVC 221 (401)
T ss_dssp CEEEEETTTCCEEEEECCC------SSCEEEEEE--ETTEEEEEETT-------SEEEEEETTSSSCEEEEEECCSSCEE
T ss_pred eEEEEECcCCeEEEEecCC------CCceEEEEE--CCCEEEEEcCC-------CCEEEEecccCcceeeEEcCCCCCee
Confidence 4677887766543321111 022223333 45566666642 26889998744311111001111112
Q ss_pred eeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccc-ccEEEE--CCEEEEEeC--ccCCCccCCce
Q 017349 173 ASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLAR-YDSAVM--GSKMYVTEG--WTWPFMFSPRG 246 (373)
Q Consensus 173 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~--~~~lyv~gG--~~~~~~~~~~i 246 (373)
.+... ++.+++.|+.+ ..+.+||..+..-... +...... .+.+.. +..+++.|+ .+ ..+
T Consensus 222 ~~~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~p~~~~ll~~~~gs~d------~~i 286 (401)
T 4aez_A 222 GLAWRSDGLQLASGGND-------NVVQIWDARSSIPKFT--KTNHNAAVKAVAWCPWQSNLLATGGGTMD------KQI 286 (401)
T ss_dssp EEEECTTSSEEEEEETT-------SCEEEEETTCSSEEEE--ECCCSSCCCEEEECTTSTTEEEEECCTTT------CEE
T ss_pred EEEEcCCCCEEEEEeCC-------CeEEEccCCCCCccEE--ecCCcceEEEEEECCCCCCEEEEecCCCC------CEE
Confidence 22222 56677777764 3588999887543211 1111111 122222 345777764 33 578
Q ss_pred EEEeCCCCceeecccCccCCcceEEEEECCeEEEE-eeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEE
Q 017349 247 GVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVI-SEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKI 325 (373)
Q Consensus 247 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~-gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l 325 (373)
..||..+++-...-. ...........-+++.+++ +|.....+.+||..+.....+..++.. ...........+++.
T Consensus 287 ~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h--~~~v~~~~~s~dg~~ 363 (401)
T 4aez_A 287 HFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAH--DTRVLYSALSPDGRI 363 (401)
T ss_dssp EEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECC--SSCCCEEEECTTSSE
T ss_pred EEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCC--CCCEEEEEECCCCCE
Confidence 999998775432211 1111111111224554444 454567899999888766655432211 111222233446777
Q ss_pred EEEeCC
Q 017349 326 YVVSSG 331 (373)
Q Consensus 326 ~i~GG~ 331 (373)
++.||.
T Consensus 364 l~s~~~ 369 (401)
T 4aez_A 364 LSTAAS 369 (401)
T ss_dssp EEEECT
T ss_pred EEEEeC
Confidence 777774
No 82
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.94 E-value=0.1 Score=47.42 Aligned_cols=187 Identities=9% Similarity=-0.041 Sum_probs=99.8
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCE-EEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGK-LFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS 170 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 170 (373)
..++++|..+.+...+...+ ..........+++ |++.+... ....++++|..+++...+..... .
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~-------~~~~~~~~spdg~~la~~~~~~-----g~~~i~~~d~~~~~~~~l~~~~~--~ 268 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP-------RHNGAPAFSPDGSKLAFALSKT-----GSLNLYVMDLASGQIRQVTDGRS--N 268 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS-------SCEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTTCCEEECCCCSS--C
T ss_pred cEEEEEECCCCcEEEeecCC-------CcccCEEEcCCCCEEEEEEecC-----CCceEEEEECCCCCEEeCcCCCC--c
Confidence 46788898888776554333 2233344444554 55454432 23479999999887765543221 1
Q ss_pred eeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEE-ECCEEEEEeCccCCCccCCceEE
Q 017349 171 FFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAV-MGSKMYVTEGWTWPFMFSPRGGV 248 (373)
Q Consensus 171 ~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~~~~~~i~~ 248 (373)
...... -+++.+++++.. . ....++.+|..+++-+.+.... ......+. -+|+.+++++... ....++.
T Consensus 269 ~~~~~~spdg~~l~~~s~~--~--g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~---g~~~i~~ 339 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQ--A--GRPQVYKVNINGGAPQRITWEG--SQNQDADVSSDGKFMVMVSSNG---GQQHIAK 339 (415)
T ss_dssp EEEEEECTTSSEEEEEECT--T--SSCEEEEEETTSSCCEECCCSS--SEEEEEEECTTSSEEEEEEECS---SCEEEEE
T ss_pred ccceEECCCCCEEEEEECC--C--CCcEEEEEECCCCCEEEEecCC--CcccCeEECCCCCEEEEEECcC---CceEEEE
Confidence 112222 245544443321 1 1346889999887755443211 11111222 2566555544321 1247899
Q ss_pred EeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCC--cceEEEeCCCCceeeec
Q 017349 249 YDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGD--CPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 249 yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~--~~~~~yd~~~~~W~~~~ 303 (373)
+|+.+++...+... . .....+..-+|+.+++++... ..++.+|.+.+....+.
T Consensus 340 ~d~~~~~~~~l~~~-~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 340 QDLATGGVQVLSST-F-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp EETTTCCEEECCCS-S-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred EECCCCCEEEecCC-C-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 99999887665432 1 111111223667666655432 37899998877666654
No 83
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.94 E-value=0.18 Score=44.22 Aligned_cols=155 Identities=11% Similarity=0.072 Sum_probs=79.6
Q ss_pred CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCce
Q 017349 178 NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTW 256 (373)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W 256 (373)
++++++.|+.+ ..+.+||..+++-..+........-.+++.. ++.+++.|+.+ ..+.+||..+++-
T Consensus 138 ~~~~l~s~s~d-------g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d------g~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWADNR-------GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD------GILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEETT-------CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT------SCEEEEESSCTTS
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCCCC
Confidence 45667767765 3588999988765333211111111222222 67788888766 5799999988764
Q ss_pred e--ecccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCcee-eecCCCCCCcccccceEE-EEeCCEEEEEeC
Q 017349 257 N--LMSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWR-YVGGDKFPCEVMHRPFAV-NGVEGKIYVVSS 330 (373)
Q Consensus 257 ~--~~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~-~~~~~~l~i~GG 330 (373)
. .+... ..... .++.+ +++.++.|+.+ .+..||..+.+-. .+...... .......++ ...+++.++.|+
T Consensus 205 ~~~~~~~~-h~~~v-~~l~fs~~g~~l~s~~~~--~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 205 ASSRFPVD-EEAKI-KEVKFADNGYWMVVECDQ--TVVCFDLRKDVGTLAYPTYTIP-EFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp CCEECCCC-TTSCE-EEEEECTTSSEEEEEESS--BEEEEETTSSTTCBSSCCCBC------CCEEEEECTTSSEEEEEE
T ss_pred CccEEecc-CCCCE-EEEEEeCCCCEEEEEeCC--eEEEEEcCCCCcceeecccccc-cccccceEEEECCCCCEEEEec
Confidence 3 22110 11111 11223 66777777743 8999998765321 12110001 000111123 233566666644
Q ss_pred CceeeeeEEEEeecCCcccceEE
Q 017349 331 GLNVAIGRVYEEQNGGISAEWKV 353 (373)
Q Consensus 331 ~~~~~~~~~~~~~~d~~~~~W~~ 353 (373)
..+ ....+|+ ++.....|+.
T Consensus 280 ~~d-~~i~v~~--~~~~~~~~~~ 299 (343)
T 3lrv_A 280 NES-NSLTIYK--FDKKTKNWTK 299 (343)
T ss_dssp TTT-TEEEEEE--ECTTTCSEEE
T ss_pred CCC-CcEEEEE--EcccccceEe
Confidence 311 2234554 7777788986
No 84
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.93 E-value=0.35 Score=47.91 Aligned_cols=225 Identities=12% Similarity=0.116 Sum_probs=115.8
Q ss_pred EEEeeCCCCCeeeCCCCCC---CCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCC---CCC
Q 017349 94 WQALDPRSGRWFVLPPMPC---PKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASP---MLT 167 (373)
Q Consensus 94 ~~~~d~~~~~W~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~---~~~ 167 (373)
+..|++.+..+......+. +.........+.....++.|++..- ...+++||+.+++++.... ++.
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~--------~~Gl~~~~~~~~~~~~~~~~~~~~~ 406 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTD--------GGGINVFENGKRVAIYNKENRELLS 406 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEB--------SSCEEEEETTEEEEECC-----CCC
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeC--------CCcEEEEECCCCeEEEccCCCCCCC
Confidence 6678888777766532210 0000111222222333578887531 1148899998887765521 111
Q ss_pred cceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccc-ccEEEE-CCEEEEEeCccCCCccCC
Q 017349 168 PRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLAR-YDSAVM-GSKMYVTEGWTWPFMFSP 244 (373)
Q Consensus 168 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~-~~~lyv~gG~~~~~~~~~ 244 (373)
..-.++... ++.|++ |... ..+.+||+.+++++.......+... .+.+.. +|.|++... .
T Consensus 407 -~~v~~i~~d~~g~lWi-gt~~-------~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--------~ 469 (781)
T 3v9f_A 407 -NSVLCSLKDSEGNLWF-GTYL-------GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--------A 469 (781)
T ss_dssp -SBEEEEEECTTSCEEE-EETT-------EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--------T
T ss_pred -cceEEEEECCCCCEEE-Eecc-------CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--------C
Confidence 112233333 567777 3221 3588999999999877532111111 112222 577776432 3
Q ss_pred ceEEEeCCCCceeecccCc----cCCcceEE-EEECCeEEEEeeCCCcceEEEeCCCCceeeecC-CCCCCcccccceEE
Q 017349 245 RGGVYDINKDTWNLMSDGM----KEGWTGIS-IVLEGKLFVISEHGDCPMKQYNPDDDTWRYVGG-DKFPCEVMHRPFAV 318 (373)
Q Consensus 245 ~i~~yd~~~~~W~~~~~~~----~~~~~~~~-~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~ 318 (373)
.+.+||+.+++|+...... ........ .--+|+|++... ...+.+||+++++++.... ..++ .....++
T Consensus 470 Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~~Gl~~~~~~~~~~~~~~~~~~l~---~~~i~~i 544 (781)
T 3v9f_A 470 GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF--GGGVGIYTPDMQLVRKFNQYEGFC---SNTINQI 544 (781)
T ss_dssp EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES--SSCEEEECTTCCEEEEECTTTTCS---CSCEEEE
T ss_pred ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc--CCCEEEEeCCCCeEEEccCCCCCC---CCeeEEE
Confidence 6899999999987664311 11111111 122577777542 2368999999998888753 1122 0122333
Q ss_pred EE-eCCEEEEEeCCceeeeeEEEEeecCCcccceEEec
Q 017349 319 NG-VEGKIYVVSSGLNVAIGRVYEEQNGGISAEWKVMT 355 (373)
Q Consensus 319 ~~-~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~W~~~~ 355 (373)
.. .+|.|++-... +-++. ||+.+.+++.+.
T Consensus 545 ~~d~~g~lWi~T~~-----Glv~~--~d~~~~~~~~~~ 575 (781)
T 3v9f_A 545 YRSSKGQMWLATGE-----GLVCF--PSARNFDYQVFQ 575 (781)
T ss_dssp EECTTSCEEEEETT-----EEEEE--SCTTTCCCEEEC
T ss_pred EECCCCCEEEEECC-----CceEE--ECCCCCcEEEcc
Confidence 33 35777775431 11133 565555555543
No 85
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.93 E-value=0.21 Score=44.93 Aligned_cols=203 Identities=13% Similarity=0.124 Sum_probs=114.7
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
..+..+|+.......+..-. ....+.+....++.||+..- ....++++++.....+.+...... ..
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~------~~~~gl~~d~~~~~ly~~D~-------~~~~I~r~~~~g~~~~~~~~~~~~-~p 161 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNL------ENAIALDFHHRRELVFWSDV-------TLDRILRANLNGSNVEEVVSTGLE-SP 161 (386)
T ss_dssp SCEEEECTTSCCCEEEECSC------SCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCCEEEEECSSCS-CC
T ss_pred ccceeeccCCCcEEEEecCC------CccEEEEEecCCCeEEEEeC-------CCCcEEEEecCCCCcEEEEeCCCC-Cc
Confidence 45788888877665543221 13345555545789998843 234799999988765544221111 11
Q ss_pred eeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc--CCccccccccEEEE--CCEEEEEeCccCCCccCCc
Q 017349 172 FASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAA--KLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPR 245 (373)
Q Consensus 172 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~ 245 (373)
.++++ .++.||+.-... ..++++++....-+.+. .+..| ...++. ++.||+.--.. ...
T Consensus 162 ~glavd~~~g~lY~~d~~~-------~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~-----~~~ 226 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGT-------SRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN-----TPR 226 (386)
T ss_dssp CCEEEETTTTEEEEEETTT-------TEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS-----SCE
T ss_pred cEEEEEeCCCeEEEEcCCC-------CeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC-----CCE
Confidence 23333 378999875432 46888887755433321 22222 223333 67899874211 257
Q ss_pred eEEEeCCCCceeecccCccCCcceEEEE--ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCC
Q 017349 246 GGVYDINKDTWNLMSDGMKEGWTGISIV--LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEG 323 (373)
Q Consensus 246 i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 323 (373)
|+++++....-+.+.. .........++ .+++||+.... ...|+++|++...-..+....+ ....+++..++
T Consensus 227 I~r~~~dG~~~~~~~~-~~~~~PnGlavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~~~~~-----~~P~giav~~~ 299 (386)
T 3v65_B 227 IEASSMDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAK-HHVIERANLDGSHRKAVISQGL-----PHPFAITVFED 299 (386)
T ss_dssp EEEEETTSCSCEEEEC-SSCSCEEEEEEEGGGTEEEEEETT-TTEEEEECTTSCSCEEEECSSC-----SSEEEEEEETT
T ss_pred EEEEeCCCCCcEEEEE-CCCCCeeeEEEeCCCCEEEEEECC-CCEEEEEeCCCCeeEEEEECCC-----CCceEEEEECC
Confidence 9999987543333221 11111112232 37899998653 5689999987543333322121 24578877899
Q ss_pred EEEEEeC
Q 017349 324 KIYVVSS 330 (373)
Q Consensus 324 ~l~i~GG 330 (373)
.||+..-
T Consensus 300 ~ly~td~ 306 (386)
T 3v65_B 300 SLYWTDW 306 (386)
T ss_dssp EEEEEET
T ss_pred EEEEeeC
Confidence 9999874
No 86
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.93 E-value=0.16 Score=46.09 Aligned_cols=134 Identities=7% Similarity=0.038 Sum_probs=69.3
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcc-ee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPR-SF 171 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r-~~ 171 (373)
.+.+||..+.+....-... .....+..+..++.+++.|+.++ .+.+||..+.+-. ..+.... .-
T Consensus 131 ~i~vwd~~~~~~~~~l~~h------~~~V~~v~~~~~~~~l~sgs~D~-------~i~iwd~~~~~~~--~~~~~h~~~V 195 (410)
T 1vyh_C 131 TIKVWDYETGDFERTLKGH------TDSVQDISFDHSGKLLASCSADM-------TIKLWDFQGFECI--RTMHGHDHNV 195 (410)
T ss_dssp CEEEEETTTCCCCEEECCC------SSCEEEEEECTTSSEEEEEETTS-------CCCEEETTSSCEE--ECCCCCSSCE
T ss_pred eEEEEECCCCcEEEEEecc------CCcEEEEEEcCCCCEEEEEeCCC-------eEEEEeCCCCcee--EEEcCCCCCE
Confidence 4677887776543221111 01223334444677777777632 5778888665422 1221111 11
Q ss_pred eeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEE--ECCEEEEEeCccCCCccCCceEE
Q 017349 172 FASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAV--MGSKMYVTEGWTWPFMFSPRGGV 248 (373)
Q Consensus 172 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~i~~ 248 (373)
.++... ++..++.|+.+ ..+.+||..++.-... +.........+. -++.+++.|+.+ ..+.+
T Consensus 196 ~~v~~~p~~~~l~s~s~D-------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D------~~v~v 260 (410)
T 1vyh_C 196 SSVSIMPNGDHIVSASRD-------KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSND------QTVRV 260 (410)
T ss_dssp EEEEECSSSSEEEEEETT-------SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETT------SCEEE
T ss_pred EEEEEeCCCCEEEEEeCC-------CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCC------CeEEE
Confidence 122222 45666667665 4688999988753221 111111111122 256777777766 57888
Q ss_pred EeCCCCce
Q 017349 249 YDINKDTW 256 (373)
Q Consensus 249 yd~~~~~W 256 (373)
||..++.-
T Consensus 261 wd~~~~~~ 268 (410)
T 1vyh_C 261 WVVATKEC 268 (410)
T ss_dssp EETTTCCE
T ss_pred EECCCCce
Confidence 88877654
No 87
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.90 E-value=0.18 Score=43.61 Aligned_cols=220 Identities=11% Similarity=0.041 Sum_probs=113.2
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+... ....+++||+... .......+ . .-.+.+.. .++++|+..... ....++++|+.+
T Consensus 42 ~g~lyv~d~----~~~~I~~~d~~g~-~~~~~~~~--~----~p~gia~~-~dG~l~vad~~~-----~~~~v~~~d~~~ 104 (306)
T 2p4o_A 42 DGTIFVTNH----EVGEIVSITPDGN-QQIHATVE--G----KVSGLAFT-SNGDLVATGWNA-----DSIPVVSLVKSD 104 (306)
T ss_dssp TSCEEEEET----TTTEEEEECTTCC-EEEEEECS--S----EEEEEEEC-TTSCEEEEEECT-----TSCEEEEEECTT
T ss_pred CCCEEEEeC----CCCeEEEECCCCc-eEEEEeCC--C----CceeEEEc-CCCcEEEEeccC-----CcceEEEEcCCC
Confidence 345777642 2345888998764 32222222 1 22344433 367788875321 112588999888
Q ss_pred CceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCe---EEeccC----Ccc-cccccc-EEEE
Q 017349 157 NQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDT---WTTAAK----LRM-GLARYD-SAVM 226 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~---W~~~~~----~~~-~~~~~~-~~~~ 226 (373)
++.+.+...+..+.....+. .++.+|+.... ...++++|+.++. |..-+. .+. ...... ...-
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~-------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~d 177 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPLSDTQYLTADSY-------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF 177 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEESSSSEEEEEETT-------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE
T ss_pred CeEEEEEeCCCccccCcccccCCCcEEEEECC-------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcC
Confidence 88766654443343333333 35567775321 2368999987652 221111 111 111111 2223
Q ss_pred CCEEEEEeCccCCCccCCceEEEeCCC-CceeecccCc-cCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeecC
Q 017349 227 GSKMYVTEGWTWPFMFSPRGGVYDINK-DTWNLMSDGM-KEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVGG 304 (373)
Q Consensus 227 ~~~lyv~gG~~~~~~~~~~i~~yd~~~-~~W~~~~~~~-~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~ 304 (373)
++.||+.--.. +.+.+||... ++........ ...-.+.++--+|+||+.... ...+.+||++ ++...+..
T Consensus 178 g~~lyv~d~~~------~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~-~~~V~~~~~~-G~~~~~~~ 249 (306)
T 2p4o_A 178 GNFLYVSNTEK------MLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHI-YNSVVRIAPD-RSTTIIAQ 249 (306)
T ss_dssp TTEEEEEETTT------TEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBT-TCCEEEECTT-CCEEEEEC
T ss_pred CCEEEEEeCCC------CEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCC-CCeEEEECCC-CCEEEEee
Confidence 45788875433 6899999875 3322111100 011122333347889887643 5689999986 44544433
Q ss_pred CCCCCcccccceEEEEe-----CCEEEEEeCC
Q 017349 305 DKFPCEVMHRPFAVNGV-----EGKIYVVSSG 331 (373)
Q Consensus 305 ~~~~~~~~~~~~~~~~~-----~~~l~i~GG~ 331 (373)
.+.+ .....+++.. ++.|||....
T Consensus 250 ~~~~---~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 250 AEQG---VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp GGGT---CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred cccc---cCCceEEEEecccCCCCEEEEECCC
Confidence 2322 1223444432 3689998764
No 88
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.88 E-value=0.026 Score=55.84 Aligned_cols=178 Identities=13% Similarity=0.077 Sum_probs=95.7
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee-eeeE-eC--CeEEEEcCCCCCCCCcCceEEEEeC
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF-ASGN-VN--GKIMAVGGTGANINETMTAVECYDP 203 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~-~~~~-~~--~~iyv~GG~~~~~~~~~~~~~~yd~ 203 (373)
.++..++.|+.+ ..+.+||...+++..+..+....... ++.. .+ +..++.|+.+ ..+.+||.
T Consensus 19 ~dg~~latg~~d-------g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-------g~I~vwd~ 84 (753)
T 3jro_A 19 YYGKRLATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVLIWKE 84 (753)
T ss_dssp SSSCCEEEEETT-------TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-------SCEEEEEE
T ss_pred CCCCeEEEEECC-------CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-------CeEEEEEC
Confidence 356666676652 26888888777766655443222222 2222 22 6677777765 35889999
Q ss_pred CCCeEEeccCCccccccccEEEE--C--CEEEEEeCccCCCccCCceEEEeCCCCceeeccc--CccCCcceEEEEE---
Q 017349 204 ESDTWTTAAKLRMGLARYDSAVM--G--SKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD--GMKEGWTGISIVL--- 274 (373)
Q Consensus 204 ~t~~W~~~~~~~~~~~~~~~~~~--~--~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~--~~~~~~~~~~~~~--- 274 (373)
.++.|..+..+.........+.. + +.+++.|+.+ ..+.+||..++.-..... ....... ++..
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~~~~v~--~l~~~p~ 156 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVN--SASWAPA 156 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECCSSCEE--EEEECCC
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecCCCceE--EEEecCc
Confidence 99988766544433322223332 3 6777777766 578999998763221111 0111111 1211
Q ss_pred ------------CCeEEEEeeCCCcceEEEeCCCC--ceeeecCCCCCCcccccceEEE-EeC---CEEEEEeCC
Q 017349 275 ------------EGKLFVISEHGDCPMKQYNPDDD--TWRYVGGDKFPCEVMHRPFAVN-GVE---GKIYVVSSG 331 (373)
Q Consensus 275 ------------~~~l~v~gg~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~-~~~---~~l~i~GG~ 331 (373)
++.+++.|+. ...+..||..++ .+..+..+... . ....++. ..+ +.+++.||.
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~~~~~~~~~~~~~~h--~-~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSDAQTYVLESTLEGH--S-DWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp C---------CGGGCCEEEEET-TSCEEEEEEETTTTEEEEEEEECCC--S-SCEEEEEECCCCSSSEEEEEEES
T ss_pred ccccccccccCCCCCEEEEEEC-CCeEEEEeccCCcccceeeeeecCC--C-CcEEEEEeccCCCCCCEEEEEec
Confidence 3566677665 567888887654 33433322211 0 1122232 234 678888774
No 89
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.87 E-value=0.12 Score=43.55 Aligned_cols=188 Identities=12% Similarity=0.039 Sum_probs=95.9
Q ss_pred CceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC-CceeccCCCCCc
Q 017349 90 ARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT-NQWQLASPMLTP 168 (373)
Q Consensus 90 ~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~ 168 (373)
....++++|+.+++...+.... ....+..+..+++.+++++. ..+++||..+ ++...+......
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~~--------~~i~~~d~~~~~~~~~~~~~~~~ 84 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTP-------ELFEAPNWSPDGKYLLLNSE--------GLLYRLSLAGDPSPEKVDTGFAT 84 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEES-------SCCEEEEECTTSSEEEEEET--------TEEEEEESSSCCSCEECCCTTCC
T ss_pred cceeEEEEeCCCCceeeeccCC-------cceEeeEECCCCCEEEEEcC--------CeEEEEeCCCCCCceEecccccc
Confidence 3456888998887766543322 22334444446666666531 2799999998 776655433221
Q ss_pred ceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCE-EEEEeCccCCCccCCc
Q 017349 169 RSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSK-MYVTEGWTWPFMFSPR 245 (373)
Q Consensus 169 r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~-lyv~gG~~~~~~~~~~ 245 (373)
.....+.. -+++.+++++.. ......++.+|..++.-+.+..... ....+.. +++ |++.++.+. ...
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~----~~~ 154 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKV---EFGKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ----VFD 154 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECT---TTSSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT----EEE
T ss_pred ccccceEECCCCCEEEEEEeC---CCCcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC----ceE
Confidence 11122222 255555555432 1134678888888777555543221 1112222 454 444444331 125
Q ss_pred eEEEeCCCCceeecccCccCCcceEEEEECCeEEEEee--CCCcceEEEeCCCCceeeec
Q 017349 246 GGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISE--HGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 246 i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg--~~~~~~~~yd~~~~~W~~~~ 303 (373)
++.+|..++....+.. ...........-+++.+++++ .+...++.++...+....+.
T Consensus 155 l~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 155 IYSMDIDSGVETRLTH-GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp EEEEETTTCCEEECCC-SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred EEEEECCCCcceEccc-CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 6667777776655543 111111111222555444433 22456777777666665554
No 90
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.86 E-value=0.084 Score=45.58 Aligned_cols=152 Identities=9% Similarity=0.103 Sum_probs=79.6
Q ss_pred EeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeC
Q 017349 125 SLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDP 203 (373)
Q Consensus 125 ~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~ 203 (373)
.+..++..++.|+.+ ..+.+||..+++....-... ...-..++. -++++++.|+.+ ..+.+||.
T Consensus 30 ~~s~~~~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~s~~~d-------~~i~vwd~ 94 (312)
T 4ery_A 30 KFSPNGEWLASSSAD-------KLIKIWGAYDGKFEKTISGH-KLGISDVAWSSDSNLLVSASDD-------KTLKIWDV 94 (312)
T ss_dssp EECTTSSEEEEEETT-------SCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETT-------SEEEEEET
T ss_pred EECCCCCEEEEeeCC-------CeEEEEeCCCcccchhhccC-CCceEEEEEcCCCCEEEEECCC-------CEEEEEEC
Confidence 333466666666652 15788888777654321111 111112222 256677777664 46889998
Q ss_pred CCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEE
Q 017349 204 ESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVI 281 (373)
Q Consensus 204 ~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~ 281 (373)
.+++-... +......-..+.+ ++.+++.|+.+ ..+.+||+.+++-...-.............-++++++.
T Consensus 95 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 95 SSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFD------ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp TTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCC------CcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 87753221 1111111111222 56677777765 57899999876532211101111111112225677777
Q ss_pred eeCCCcceEEEeCCCCcee
Q 017349 282 SEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 282 gg~~~~~~~~yd~~~~~W~ 300 (373)
|+. ...+..||..+++-.
T Consensus 167 ~~~-d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 167 SSY-DGLCRIWDTASGQCL 184 (312)
T ss_dssp EET-TSCEEEEETTTCCEE
T ss_pred EeC-CCcEEEEECCCCcee
Confidence 765 568999999876543
No 91
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.86 E-value=0.17 Score=45.96 Aligned_cols=183 Identities=11% Similarity=0.099 Sum_probs=95.4
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
..++++|..+++...+-.+.... ....+.....++..++.|+.++ .+.+||..+++-... +......
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~----~~V~sv~fspdg~~lasgs~Dg-------~v~iWd~~~~~~~~~--~~~h~~~ 191 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPG----EYISSVAWIKEGNYLAVGTSSA-------EVQLWDVQQQKRLRN--MTSHSAR 191 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTT----CCEEEEEECTTSSEEEEEETTS-------CEEEEETTTTEEEEE--ECCCSSC
T ss_pred CEEEEEECCCCCEEEEEEecCCC----CcEEEEEECCCCCEEEEEECCC-------eEEEEEcCCCcEEEE--EeCCCCc
Confidence 35888999998876654443111 2344555555778888877622 688999988753322 1111222
Q ss_pred eeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEE--EECCEEEEEeCccCCCccCCceEEE
Q 017349 172 FASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSA--VMGSKMYVTEGWTWPFMFSPRGGVY 249 (373)
Q Consensus 172 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~--~~~~~lyv~gG~~~~~~~~~~i~~y 249 (373)
......++.+.+.|+.+ ..+..+|..+..... ..+.......... ..++..++.++.+ ..+.++
T Consensus 192 v~~~s~~~~~l~sgs~d-------~~i~~~d~~~~~~~~-~~~~~h~~~~~~~~~~~~g~~l~s~~~D------~~v~i~ 257 (420)
T 4gga_A 192 VGSLSWNSYILSSGSRS-------GHIHHHDVRVAEHHV-ATLSGHSQEVCGLRWAPDGRHLASGGND------NLVNVW 257 (420)
T ss_dssp EEEEEEETTEEEEEETT-------SEEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETT------SCEEEE
T ss_pred eEEEeeCCCEEEEEeCC-------CceeEeeecccceee-EEecccccceeeeeecCCCCeeeeeecc------ccceEE
Confidence 23344567777777664 356777766543221 1111111111111 1256666666655 567888
Q ss_pred eCCCCc--eeecccC-ccCCcceEEEE--ECCeEEEE-eeCCCcceEEEeCCCCceee
Q 017349 250 DINKDT--WNLMSDG-MKEGWTGISIV--LEGKLFVI-SEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 250 d~~~~~--W~~~~~~-~~~~~~~~~~~--~~~~l~v~-gg~~~~~~~~yd~~~~~W~~ 301 (373)
|..++. +..+... .........+. .+..++.+ +|.....+..||..+++-..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 315 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce
Confidence 887654 2222110 11111111111 24455554 45445689999998775443
No 92
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=96.85 E-value=0.00042 Score=61.44 Aligned_cols=44 Identities=20% Similarity=0.205 Sum_probs=39.1
Q ss_pred CCCCCCCCChHHHHHhhccCCccchhhhhhhcHhHHhhccCchh
Q 017349 23 TQPLIPGLPDEIGELCLLHVPYPYQALVRSVSYSWNKAITDPGF 66 (373)
Q Consensus 23 ~~~~~~~LP~dl~~~il~rlp~~~l~~~~~v~k~W~~l~~~~~~ 66 (373)
+...|..||+|++.+||.+|+..++.+++.|||+|+.+..+|.+
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 35678999999999999999999999999999999999887754
No 93
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.82 E-value=0.032 Score=49.16 Aligned_cols=145 Identities=12% Similarity=0.026 Sum_probs=76.4
Q ss_pred ceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccccc-EE
Q 017349 147 QSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYD-SA 224 (373)
Q Consensus 147 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~-~~ 224 (373)
-.+|.+|..+++++.+...........++. -++++|+.+... ....+.+||..+++++.+..+........ .+
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~-----~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED-----DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET-----TEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC-----CCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 357788888888766543221221222222 267777775421 12468999998888877655333222222 33
Q ss_pred EE-CCE-EEEEeCccCCCccCCceEEEeCC-CCceeecccC-c----c----CCcceEEEEE--CCeEEEEeeCCCcceE
Q 017349 225 VM-GSK-MYVTEGWTWPFMFSPRGGVYDIN-KDTWNLMSDG-M----K----EGWTGISIVL--EGKLFVISEHGDCPMK 290 (373)
Q Consensus 225 ~~-~~~-lyv~gG~~~~~~~~~~i~~yd~~-~~~W~~~~~~-~----~----~~~~~~~~~~--~~~l~v~gg~~~~~~~ 290 (373)
+. +|+ ||+.+..+ ..+.+||+. ++..+.+... . + .......+.+ +|++|+.+. ....+.
T Consensus 93 ~spdg~~l~~~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~-~~~~v~ 165 (347)
T 3hfq_A 93 VDEARQLVYSANYHK------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL-GSDKVY 165 (347)
T ss_dssp EETTTTEEEEEETTT------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET-TTTEEE
T ss_pred ECCCCCEEEEEeCCC------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC-CCCEEE
Confidence 33 555 66655332 467888874 3344333210 0 0 0011112333 677666543 356889
Q ss_pred EEeCC-CCceeeec
Q 017349 291 QYNPD-DDTWRYVG 303 (373)
Q Consensus 291 ~yd~~-~~~W~~~~ 303 (373)
+||.. +++...+.
T Consensus 166 ~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 166 VYNVSDAGQLSEQS 179 (347)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEECCCCcEEEee
Confidence 99987 55555443
No 94
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.81 E-value=0.2 Score=43.42 Aligned_cols=198 Identities=11% Similarity=0.097 Sum_probs=96.0
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCe-eeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeC
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRW-FVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRA 154 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~ 154 (373)
.+..+|+.+.. ...++++|+.+.+. ......... ...+.+....++.+| .+... .....+.+||.
T Consensus 50 dg~~l~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~-~~~~~----~~~~~i~v~d~ 115 (331)
T 3u4y_A 50 DCSNVVVTSDF----CQTLVQIETQLEPPKVVAIQEGQS-----SMADVDITPDDQFAV-TVTGL----NHPFNMQSYSF 115 (331)
T ss_dssp SSCEEEEEEST----TCEEEEEECSSSSCEEEEEEECSS-----CCCCEEECTTSSEEE-ECCCS----SSSCEEEEEET
T ss_pred CCCEEEEEeCC----CCeEEEEECCCCceeEEecccCCC-----CccceEECCCCCEEE-EecCC----CCcccEEEEEC
Confidence 35567776532 23688999988764 222111101 112133333345566 43221 11227999999
Q ss_pred CCCceeccCCCCCcceeeeeeEe-CC-eEEEEcCCCCCCCCcCce-EEEEeCCCCe-EEec--cCCccccccccEEEE-C
Q 017349 155 TTNQWQLASPMLTPRSFFASGNV-NG-KIMAVGGTGANINETMTA-VECYDPESDT-WTTA--AKLRMGLARYDSAVM-G 227 (373)
Q Consensus 155 ~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~-~~~yd~~t~~-W~~~--~~~~~~~~~~~~~~~-~ 227 (373)
.+++.... ++.....+.++.. ++ .+|+.+..+ .. +.+|+...+. -... ..++........+.. +
T Consensus 116 ~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spd 186 (331)
T 3u4y_A 116 LKNKFIST--IPIPYDAVGIAISPNGNGLILIDRSS-------ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPD 186 (331)
T ss_dssp TTTEEEEE--EECCTTEEEEEECTTSSCEEEEEETT-------TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTT
T ss_pred CCCCeEEE--EECCCCccceEECCCCCEEEEEecCC-------CceEEEEEECCCCcEeecCCccccCCCCccceEECCC
Confidence 88865433 2222222333333 33 577765432 23 6666655432 1111 011111111222222 5
Q ss_pred CE-EEEEeCccCCCccCCceEEEeCCCCce-eeccc-CccCCcceEEEEECCe-EEEEeeCCCcceEEEeCCCCceeeec
Q 017349 228 SK-MYVTEGWTWPFMFSPRGGVYDINKDTW-NLMSD-GMKEGWTGISIVLEGK-LFVISEHGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 228 ~~-lyv~gG~~~~~~~~~~i~~yd~~~~~W-~~~~~-~~~~~~~~~~~~~~~~-l~v~gg~~~~~~~~yd~~~~~W~~~~ 303 (373)
|+ +|+.+... ..+.+||+.+++. +.+.. +........+..-+++ ||+... ....+.+||+++++.+.+.
T Consensus 187 g~~l~v~~~~~------~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-~~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 187 GNFAFVANLIG------NSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTE-STVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp SSEEEEEETTT------TEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECS-SEEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCC------CeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEc-CCCEEEEEECCCCceeeec
Confidence 54 77776443 5799999988775 11211 1111112222223566 666543 3567999999988775544
No 95
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.81 E-value=0.26 Score=44.36 Aligned_cols=175 Identities=9% Similarity=-0.024 Sum_probs=88.9
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.+||..+... ...+. . ...........++..++.|+.+ ..+.+||..+++-...-... ...-.
T Consensus 79 ~v~i~d~~~~~~--~~~~~-~----~~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~h-~~~v~ 143 (420)
T 3vl1_A 79 HDFLFNTIIRDG--SKMLK-R----ADYTAVDTAKLQMRRFILGTTE-------GDIKVLDSNFNLQREIDQAH-VSEIT 143 (420)
T ss_dssp EEEEEECCSEET--TTTSC-S----CCEEEEEEECSSSCEEEEEETT-------SCEEEECTTSCEEEEETTSS-SSCEE
T ss_pred cEEEEEecccce--eeEEe-c----CCceEEEEEecCCCEEEEEECC-------CCEEEEeCCCcceeeecccc-cCccE
Confidence 577788765432 11122 1 1222333444577778877652 26889998876543332111 11122
Q ss_pred eeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccc-ccEEEE-CCEEEEEeCccCCCccCCceEEE
Q 017349 173 ASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLAR-YDSAVM-GSKMYVTEGWTWPFMFSPRGGVY 249 (373)
Q Consensus 173 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~-~~~lyv~gG~~~~~~~~~~i~~y 249 (373)
.++.. ++++++.|+.+ ..+.+||..+.+-. ..+...... .+.+.. ++++++.|+.+ ..+.+|
T Consensus 144 ~~~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d------~~v~iw 208 (420)
T 3vl1_A 144 KLKFFPSGEALISSSQD-------MQLKIWSVKDGSNP--RTLIGHRATVTDIAIIDRGRNVLSASLD------GTIRLW 208 (420)
T ss_dssp EEEECTTSSEEEEEETT-------SEEEEEETTTCCCC--EEEECCSSCEEEEEEETTTTEEEEEETT------SCEEEE
T ss_pred EEEECCCCCEEEEEeCC-------CeEEEEeCCCCcCc--eEEcCCCCcEEEEEEcCCCCEEEEEcCC------CcEEEe
Confidence 22222 56666666664 36889998876421 111111111 112222 56666677665 568899
Q ss_pred eCCCCceee-cccC-ccCCcceEEE----------------------EECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 250 DINKDTWNL-MSDG-MKEGWTGISI----------------------VLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 250 d~~~~~W~~-~~~~-~~~~~~~~~~----------------------~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
|..+++-.. +... .........+ .-++++++.|+. ...+..||..+.+
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV-SGVITVHNVFSKE 280 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET-TSCEEEEETTTCC
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC-CCeEEEEECCCCc
Confidence 998775322 1110 0011101101 125667777665 6679999997764
No 96
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.80 E-value=0.46 Score=47.16 Aligned_cols=204 Identities=10% Similarity=0.137 Sum_probs=109.0
Q ss_pred EEEeeCCCCCeeeCCCCCCCC--CCCCCceEEEEeccCCE-EEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCC---
Q 017349 94 WQALDPRSGRWFVLPPMPCPK--AVCPQAFACTSLPRQGK-LFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLT--- 167 (373)
Q Consensus 94 ~~~~d~~~~~W~~~~~~~~~~--~~~~~~~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~--- 167 (373)
+..||+.++++......+... ........+.....++. |++.. . ...+++||+.+++++.......
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt-~-------~~Gl~~~d~~~~~~~~~~~~~~~l~ 450 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT-H-------AGGLSILHRNSGQVENFNQRNSQLV 450 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-T-------TTEEEEEETTTCCEEEECTTTSCCS
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-C-------cCceeEEeCCCCcEEEeecCCCCcC
Confidence 678899988887764321000 00011122222223566 77742 1 1258999999988776643110
Q ss_pred cceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCC--cccc--ccccEEEE--CCEEEEEeCccCCC
Q 017349 168 PRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKL--RMGL--ARYDSAVM--GSKMYVTEGWTWPF 240 (373)
Q Consensus 168 ~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~--~~~~--~~~~~~~~--~~~lyv~gG~~~~~ 240 (373)
.....++... ++.|++... ..+.+||+.+++|+..... +... ........ +|.|++...
T Consensus 451 ~~~v~~i~~d~~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~----- 516 (795)
T 4a2l_A 451 NENVYAILPDGEGNLWLGTL---------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE----- 516 (795)
T ss_dssp CSCEEEEEECSSSCEEEEES---------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-----
T ss_pred CCeeEEEEECCCCCEEEEec---------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-----
Confidence 1111222222 567777542 2488999999999877533 1111 11111222 577777543
Q ss_pred ccCCceEEEeCCCCceeeccc-----CccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecC-CCCCCccc
Q 017349 241 MFSPRGGVYDINKDTWNLMSD-----GMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGG-DKFPCEVM 312 (373)
Q Consensus 241 ~~~~~i~~yd~~~~~W~~~~~-----~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~ 312 (373)
..+.+||+.++.+ .+.. .++.... .++.. +|+|++... . .+.+||+++++++.... -.+|.
T Consensus 517 ---~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i-~~i~~d~~g~lWigT~--~-Gl~~~d~~~~~~~~~~~~~gl~~--- 585 (795)
T 4a2l_A 517 ---EGLSVFKQEGLDI-QKASILPVSNVTKLFT-NCIYEASNGIIWVGTR--E-GFYCFNEKDKQIKRYNTTNGLPN--- 585 (795)
T ss_dssp ---SCEEEEEEETTEE-EECCCSCSCGGGGSCE-EEEEECTTSCEEEEES--S-CEEEEETTTTEEEEECGGGTCSC---
T ss_pred ---CceEEEeCCCCeE-EEecCCCCCCCCCCee-EEEEECCCCCEEEEeC--C-CceeECCCCCcEEEeCCCCCCch---
Confidence 2589999998888 4321 1111111 12222 577777443 2 78999999998887643 12331
Q ss_pred ccceEEEEe-CCEEEEEeC
Q 017349 313 HRPFAVNGV-EGKIYVVSS 330 (373)
Q Consensus 313 ~~~~~~~~~-~~~l~i~GG 330 (373)
....+++.. +|+|++.+.
T Consensus 586 ~~i~~i~~d~~g~lWi~t~ 604 (795)
T 4a2l_A 586 NVVYGILEDSFGRLWLSTN 604 (795)
T ss_dssp SCEEEEEECTTSCEEEEET
T ss_pred hheEEEEECCCCCEEEEcC
Confidence 122334333 578888775
No 97
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.79 E-value=0.25 Score=43.60 Aligned_cols=246 Identities=12% Similarity=0.088 Sum_probs=110.9
Q ss_pred CCCEEEEEEecC-CCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeC
Q 017349 76 SLPYLFIFSFHK-PTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRA 154 (373)
Q Consensus 76 ~~~~l~~~gg~~-~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~ 154 (373)
.+..||+..... ......++.+|..+.+...+...+... ......+. .++.||+.... ...+.+|+.
T Consensus 60 dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~---~~p~~~~~--dg~~l~~~~~~-------~~~v~~~~~ 127 (361)
T 3scy_A 60 DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG---ADPCYLTT--NGKNIVTANYS-------GGSITVFPI 127 (361)
T ss_dssp TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS---SCEEEEEE--CSSEEEEEETT-------TTEEEEEEB
T ss_pred CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC---CCcEEEEE--CCCEEEEEECC-------CCEEEEEEe
Confidence 356677765431 123334455666666666554433111 01122222 36677776532 236888887
Q ss_pred CCCc-eeccCC-------CCC-----cceeeeeeEe-CC-eEEEEcCCCCCCCCcCceEEEEeCCCCe-------EEec-
Q 017349 155 TTNQ-WQLASP-------MLT-----PRSFFASGNV-NG-KIMAVGGTGANINETMTAVECYDPESDT-------WTTA- 211 (373)
Q Consensus 155 ~t~~-W~~~~~-------~~~-----~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~-------W~~~- 211 (373)
.++. ...+.. -+. ....+.++.. ++ .+|+.+..+ ..+.+|+...+. ....
T Consensus 128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-------~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGT-------DQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTT-------TEEEEEEECTTCCTTTCCCCEEEE
T ss_pred CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCC-------CEEEEEEEcCCCCcccccceeecc
Confidence 6542 222111 010 0111333332 44 477654322 357777665433 2111
Q ss_pred ----cCCccccccccEEEE-CCE-EEEEeCccCCCccCCceEEEeCCCCceeeccc--CccCCcce-EEEEE--CCe-EE
Q 017349 212 ----AKLRMGLARYDSAVM-GSK-MYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD--GMKEGWTG-ISIVL--EGK-LF 279 (373)
Q Consensus 212 ----~~~~~~~~~~~~~~~-~~~-lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~--~~~~~~~~-~~~~~--~~~-l~ 279 (373)
...+........+.. +|+ +|+.+... ..+.+||..+++.+.+.. ..+..... ..+.+ +|+ ||
T Consensus 201 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~------~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~ 274 (361)
T 3scy_A 201 TPEAFKVAPGSGPRHLIFNSDGKFAYLINEIG------GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLY 274 (361)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTT------CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEE
T ss_pred cccceecCCCCCCeEEEEcCCCCEEEEEcCCC------CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEE
Confidence 011111111122332 554 77665333 578999998887755432 11111111 12333 565 55
Q ss_pred EEeeCCCcceEEEeC--CCCceeeecCCCCCCcccccceEEE-EeCCE-EEEEeCCceeeeeEEEEeecCCcccceEEe
Q 017349 280 VISEHGDCPMKQYNP--DDDTWRYVGGDKFPCEVMHRPFAVN-GVEGK-IYVVSSGLNVAIGRVYEEQNGGISAEWKVM 354 (373)
Q Consensus 280 v~gg~~~~~~~~yd~--~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~-l~i~GG~~~~~~~~~~~~~~d~~~~~W~~~ 354 (373)
+........+.+|+. .+++++.+...+.. .....++ .-+++ ||+.+... ....++. .|.++.+-+.+
T Consensus 275 v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g----~~~~~~~~spdg~~l~~~~~~~--~~v~v~~--~d~~~g~~~~~ 345 (361)
T 3scy_A 275 ASNRLKADGVAIFKVDETNGTLTKVGYQLTG----IHPRNFIITPNGKYLLVACRDT--NVIQIFE--RDQATGLLTDI 345 (361)
T ss_dssp EEECSSSCEEEEEEECTTTCCEEEEEEEECS----SCCCEEEECTTSCEEEEEETTT--TEEEEEE--ECTTTCCEEEC
T ss_pred EECCCCCCEEEEEEEcCCCCcEEEeeEecCC----CCCceEEECCCCCEEEEEECCC--CCEEEEE--EECCCCcEeec
Confidence 544321446677665 46677766543321 1222333 33455 66555321 2233444 66655554433
No 98
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.79 E-value=0.17 Score=43.52 Aligned_cols=212 Identities=14% Similarity=0.187 Sum_probs=104.4
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccC-CEEEEEcCccCCCCCCcceeEEEeCCCCceecc-CCCCC--
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQ-GKLFVLGGMRSDTETPMQSTIMYRATTNQWQLA-SPMLT-- 167 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~-- 167 (373)
..+..||+.++++..+.. +........-.+.+. ..+ +.+|+.... ..+++||+. ++...+ .....
T Consensus 46 ~~i~~~d~~~g~~~~~~~-~~~~~~~~~~~~i~~-~~~~g~l~v~~~~--------~~l~~~d~~-g~~~~~~~~~~~~~ 114 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICK-PEVNGYGGIPAGCQC-DRDANQLFVADMR--------LGLLVVQTD-GTFEEIAKKDSEGR 114 (314)
T ss_dssp CEEEEECTTTCCEEEEEC-CEETTEECCEEEEEE-CSSSSEEEEEETT--------TEEEEEETT-SCEEECCSBCTTSC
T ss_pred CEEEEEeCCCCcEEEEEe-cccCCCCCCCceEEE-ecCCCcEEEEECC--------CCEEEEeCC-CCEEEEEeccCCCc
Confidence 358889998888866532 100000012233333 335 889987542 268999998 766554 32211
Q ss_pred c-ceeeeeeE-eCCeEEEEcCCCC--------CCCCcCceEEEEeCCCCeEEecc-CCccccccccEEEE-----CC-EE
Q 017349 168 P-RSFFASGN-VNGKIMAVGGTGA--------NINETMTAVECYDPESDTWTTAA-KLRMGLARYDSAVM-----GS-KM 230 (373)
Q Consensus 168 ~-r~~~~~~~-~~~~iyv~GG~~~--------~~~~~~~~~~~yd~~t~~W~~~~-~~~~~~~~~~~~~~-----~~-~l 230 (373)
+ .....++. -++++|+...... ........+++||+. ++.+.+. .+.. ....+.. ++ .|
T Consensus 115 ~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~~~i~~~~~~d~dg~~l 190 (314)
T 1pjx_A 115 RMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF---PNGIAVRHMNDGRPYQL 190 (314)
T ss_dssp BCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS---EEEEEEEECTTSCEEEE
T ss_pred cccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC---cceEEEecccCCCCCEE
Confidence 1 11222333 2578887653210 011123578899887 5554432 1111 1223333 34 47
Q ss_pred EEEeCccCCCccCCceEEEeCC-CCceeeccc--CccCC--cceEEEE--ECCeEEEEeeCCCcceEEEeCCCCcee-ee
Q 017349 231 YVTEGWTWPFMFSPRGGVYDIN-KDTWNLMSD--GMKEG--WTGISIV--LEGKLFVISEHGDCPMKQYNPDDDTWR-YV 302 (373)
Q Consensus 231 yv~gG~~~~~~~~~~i~~yd~~-~~~W~~~~~--~~~~~--~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~~~W~-~~ 302 (373)
|+..... ..+.+||+. +++...... ..+.. .....+. -+|+||+.... ...+.+||+++++.. .+
T Consensus 191 ~v~~~~~------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-~~~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 191 IVAETPT------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-SSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp EEEETTT------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-TTEEEEECTTCBSCSEEE
T ss_pred EEEECCC------CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-CCEEEEEcCCCCcEeEEE
Confidence 7765432 578899876 444322111 01111 1111222 36888887533 458999999855433 23
Q ss_pred cCCCCCCcccccceEEEE-eCCE-EEEEeCC
Q 017349 303 GGDKFPCEVMHRPFAVNG-VEGK-IYVVSSG 331 (373)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~-~~~~-l~i~GG~ 331 (373)
. .+. ....+++. -+++ ||+.+..
T Consensus 264 ~---~~~---~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 264 R---CPF---EKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp E---CSS---SCEEEEEECTTSSEEEEEETT
T ss_pred e---CCC---CCceeEEECCCCCEEEEEeCC
Confidence 2 220 12233333 3455 8877653
No 99
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.71 E-value=0.39 Score=46.35 Aligned_cols=247 Identities=12% Similarity=-0.012 Sum_probs=119.5
Q ss_pred ceeEEEeeCC--C-CCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCC---CCCCcceeEEEeCCC------Cc
Q 017349 91 RIQWQALDPR--S-GRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSD---TETPMQSTIMYRATT------NQ 158 (373)
Q Consensus 91 ~~~~~~~d~~--~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~---~~~~~~~~~~yd~~t------~~ 158 (373)
..+++.+|.. . .....+...+... ............+++.+++...... .......++++|..+ +.
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~--~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVG--GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCST--TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCC--CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 3458888876 3 5555555433110 0122334444446654444433100 012345899999988 65
Q ss_pred eeccC-CCCCcceeeeeeE-eCCeEEEEcCCCCCC-CCcCceEEEEeCC-CCeEEeccCCccc--cccccEEEE-CCEEE
Q 017349 159 WQLAS-PMLTPRSFFASGN-VNGKIMAVGGTGANI-NETMTAVECYDPE-SDTWTTAAKLRMG--LARYDSAVM-GSKMY 231 (373)
Q Consensus 159 W~~~~-~~~~~r~~~~~~~-~~~~iyv~GG~~~~~-~~~~~~~~~yd~~-t~~W~~~~~~~~~--~~~~~~~~~-~~~ly 231 (373)
.+.+. .-. ........ -+++..++...+... ......++++|.. ++.+.....+... ......+.. +|++|
T Consensus 179 ~~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~ 256 (662)
T 3azo_A 179 VRELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLI 256 (662)
T ss_dssp SEESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEE
T ss_pred eeEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEE
Confidence 55554 211 11112222 245544444332101 1123579999998 5633222222211 111122222 77877
Q ss_pred EEeCccCCCccCCceEEEeCCCCceeecccCccCC----c---ceEEEEE-CCeEEEEeeCCCcceEEEeCCCCceeeec
Q 017349 232 VTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEG----W---TGISIVL-EGKLFVISEHGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 232 v~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~----~---~~~~~~~-~~~l~v~gg~~~~~~~~yd~~~~~W~~~~ 303 (373)
+.+..++ ...++.+|+.+++++.+....... + ....+.. ++++++.+..+...++.+|.++++.+.+.
T Consensus 257 ~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 257 VATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAA 332 (662)
T ss_dssp EEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECC
T ss_pred EEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEec
Confidence 7765431 247999999888887764311100 0 0111222 67777766444457778898877766654
Q ss_pred CCCCCCcccccceEE-EEeCCEEEEEeCCceeeeeEEEEeecCCcccceEEe
Q 017349 304 GDKFPCEVMHRPFAV-NGVEGKIYVVSSGLNVAIGRVYEEQNGGISAEWKVM 354 (373)
Q Consensus 304 ~~~~~~~~~~~~~~~-~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~W~~~ 354 (373)
. +. .....+ ...++.++++.+..+ ...+++. +|.++.+.+.+
T Consensus 333 ~---~~---~~~~~~~s~~~~~~~~~~~~~~-~~~~i~~--~d~~~g~~~~l 375 (662)
T 3azo_A 333 G---PW---TEWAATLTVSGTRAVGVAASPR-TAYEVVE--LDTVTGRARTI 375 (662)
T ss_dssp S---SC---CEEEEEEEEETTEEEEEEEETT-EEEEEEE--EETTTCCEEEE
T ss_pred C---CC---CeEEEEEecCCCEEEEEEcCCC-CCCEEEE--EECCCCceEEe
Confidence 2 20 111233 345666766655322 2234444 34334444444
No 100
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.68 E-value=0.48 Score=46.35 Aligned_cols=213 Identities=9% Similarity=0.052 Sum_probs=106.0
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCC---------CCCcc
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDT---------ETPMQ 147 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~---------~~~~~ 147 (373)
+..|.+.....+.....++++|..+++..... ++ . ..+.....+.+++.++++...... .....
T Consensus 136 g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~--~----~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~ 208 (710)
T 2xdw_A 136 GEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LE--R----VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQ 208 (710)
T ss_dssp SSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EE--E----ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCC
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCccc-cc--C----cccceEEEEeCCCEEEEEEECCccccccccccccCCCC
Confidence 33444333333334457899999988776531 11 0 112223333355434343322110 01234
Q ss_pred eeEEEeCCCCcee--ccCCCC-CcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCC------C--eEEeccCCc
Q 017349 148 STIMYRATTNQWQ--LASPML-TPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPES------D--TWTTAAKLR 215 (373)
Q Consensus 148 ~~~~yd~~t~~W~--~~~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t------~--~W~~~~~~~ 215 (373)
.+++++..+++.. .+...+ .+........ -+++..++.... .....+.++++|..+ . .++.+..-.
T Consensus 209 ~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~--~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 209 KLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIRE--GCDPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC--SSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred EEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEc--cCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence 6899999887643 221111 1222222222 244433333321 111246789999876 4 576664322
Q ss_pred cccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCC---ceeecccCccCCcceEEEEE-CCeEEEEeeCC-CcceE
Q 017349 216 MGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKD---TWNLMSDGMKEGWTGISIVL-EGKLFVISEHG-DCPMK 290 (373)
Q Consensus 216 ~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~---~W~~~~~~~~~~~~~~~~~~-~~~l~v~gg~~-~~~~~ 290 (373)
.... .....-++.||+.+..+ .....++.+|+.+. .|+.+............... ++++++....+ ...++
T Consensus 287 ~~~~-~~~s~dg~~l~~~s~~~---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 287 EGEY-DYVTNEGTVFTFKTNRH---SPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp SSCE-EEEEEETTEEEEEECTT---CTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEE
T ss_pred CcEE-EEEeccCCEEEEEECCC---CCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEE
Confidence 2111 11222366788876543 22357899999876 48776542221122222445 77787776543 34688
Q ss_pred EEeCCCCc-eeee
Q 017349 291 QYNPDDDT-WRYV 302 (373)
Q Consensus 291 ~yd~~~~~-W~~~ 302 (373)
++|+.+++ ...+
T Consensus 363 ~~~~~~g~~~~~l 375 (710)
T 2xdw_A 363 LHDLATGALLKIF 375 (710)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCCEEEec
Confidence 99985554 3444
No 101
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.68 E-value=0.27 Score=42.98 Aligned_cols=184 Identities=10% Similarity=0.027 Sum_probs=88.7
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.+||..+.+-... +... .....+..+..++..++.++.+ ..+.+||..+++-...-.. .....
T Consensus 55 ~i~vwd~~~~~~~~~--~~~h----~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~--~~~v~ 119 (369)
T 3zwl_B 55 SASVWYSLNGERLGT--LDGH----TGTIWSIDVDCFTKYCVTGSAD-------YSIKLWDVSNGQCVATWKS--PVPVK 119 (369)
T ss_dssp CEEEEETTTCCEEEE--ECCC----SSCEEEEEECTTSSEEEEEETT-------TEEEEEETTTCCEEEEEEC--SSCEE
T ss_pred EEEEEeCCCchhhhh--hhhc----CCcEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCcEEEEeec--CCCeE
Confidence 477788777654332 2200 1223333444456666676652 2689999988764333221 11112
Q ss_pred eeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCe----EEeccCCc-----cccc--cccEEEE--CCEEEEEeCccC
Q 017349 173 ASGN-VNGKIMAVGGTGANINETMTAVECYDPESDT----WTTAAKLR-----MGLA--RYDSAVM--GSKMYVTEGWTW 238 (373)
Q Consensus 173 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~----W~~~~~~~-----~~~~--~~~~~~~--~~~lyv~gG~~~ 238 (373)
.+.. -+++.++.++.+ .......+.+||..+.. +......+ .... ....+.. +++++++|+.+
T Consensus 120 ~~~~~~~~~~l~~~~~~--~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d- 196 (369)
T 3zwl_B 120 RVEFSPCGNYFLAILDN--VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD- 196 (369)
T ss_dssp EEEECTTSSEEEEEECC--BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-
T ss_pred EEEEccCCCEEEEecCC--ccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-
Confidence 2222 245555555432 12223467777765542 22111111 0000 1112222 56666666655
Q ss_pred CCccCCceEEEeCCCC-cee-ecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceee
Q 017349 239 PFMFSPRGGVYDINKD-TWN-LMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 239 ~~~~~~~i~~yd~~~~-~W~-~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
..+.+||+.++ .-. .+.. ...........-++++++.++. ...+..||..+.+...
T Consensus 197 -----g~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 197 -----GKISKYDVSNNYEYVDSIDL-HEKSISDMQFSPDLTYFITSSR-DTNSFLVDVSTLQVLK 254 (369)
T ss_dssp -----SEEEEEETTTTTEEEEEEEC-CSSCEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEE
T ss_pred -----CEEEEEECCCCcEeEEEEec-CCCceeEEEECCCCCEEEEecC-CceEEEEECCCCceee
Confidence 57899999873 322 2211 1111111112226666676664 5689999998765443
No 102
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.67 E-value=0.28 Score=46.72 Aligned_cols=247 Identities=9% Similarity=-0.066 Sum_probs=116.1
Q ss_pred CCCCC---CCCChHHHHHhhccC---Cc-cchhhhhhhcHhHHhhccCchhhHhhhhccCC-CCEEEEEEecCCCCceeE
Q 017349 23 TQPLI---PGLPDEIGELCLLHV---PY-PYQALVRSVSYSWNKAITDPGFALCKKSLSLS-LPYLFIFSFHKPTARIQW 94 (373)
Q Consensus 23 ~~~~~---~~LP~dl~~~il~rl---p~-~~l~~~~~v~k~W~~l~~~~~~~~~~~~~~~~-~~~l~~~gg~~~~~~~~~ 94 (373)
.|+.+ ..|.++=+..+.++| +. ..-.....+.+.|..+....... ........ .+.+|+... ....+
T Consensus 105 ~Mp~~~~~~~Lsd~ei~~l~~yi~~~~~~~~~~~~~~i~~s~kv~~~~~~~P-~~~~~~~d~~~~~~V~~~----~~~~V 179 (567)
T 1qks_A 105 GMPNWGTSGELSAEQVDLMANYLLLDPAAPPEFGMKEMRESWKVHVAPEDRP-TQQMNDWDLENLFSVTLR----DAGQI 179 (567)
T ss_dssp CCTTTSCCCCCCHHHHHHHHHHHHSCCCCCCCCCHHHHHHHCEESSCGGGSC-SSCCSCCCGGGEEEEEET----TTTEE
T ss_pred CCCCccccCCCCHHHHHHHHHHHhhcccCCCccchhhhhccceeeccccccc-cccccccCCCceEEEEeC----CCCeE
Confidence 36666 468877666654443 21 11222233445554443111010 00111111 456776642 34578
Q ss_pred EEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeee
Q 017349 95 QALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFAS 174 (373)
Q Consensus 95 ~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~ 174 (373)
.++|+.+++-...-+.. . .-++.+....++++|+.+. ...+.++|+.+.+-+.+..++.......+
T Consensus 180 ~viD~~t~~v~~~i~~g--~----~p~~v~~SpDGr~lyv~~~--------dg~V~viD~~~~t~~~v~~i~~G~~P~~i 245 (567)
T 1qks_A 180 ALIDGSTYEIKTVLDTG--Y----AVHISRLSASGRYLFVIGR--------DGKVNMIDLWMKEPTTVAEIKIGSEARSI 245 (567)
T ss_dssp EEEETTTCCEEEEEECS--S----CEEEEEECTTSCEEEEEET--------TSEEEEEETTSSSCCEEEEEECCSEEEEE
T ss_pred EEEECCCCeEEEEEeCC--C----CccceEECCCCCEEEEEcC--------CCeEEEEECCCCCCcEeEEEecCCCCcee
Confidence 99999988654322222 1 2234444443567887642 13799999862222333333333333334
Q ss_pred eEe-----CC-eEEEEcCCCCCCCCcCceEEEEeCCCCeEEe-cc--CCc--------cccccccEEEECCEEEEEeCcc
Q 017349 175 GNV-----NG-KIMAVGGTGANINETMTAVECYDPESDTWTT-AA--KLR--------MGLARYDSAVMGSKMYVTEGWT 237 (373)
Q Consensus 175 ~~~-----~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~--~~~--------~~~~~~~~~~~~~~lyv~gG~~ 237 (373)
++. ++ .+|+..-. ...+.++|..|.+=.. ++ .++ .+|.....+..++..+++.-.
T Consensus 246 a~s~~~~pDGk~l~v~n~~-------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~- 317 (567)
T 1qks_A 246 ETSKMEGWEDKYAIAGAYW-------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK- 317 (567)
T ss_dssp EECCSTTCTTTEEEEEEEE-------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET-
T ss_pred EEccccCCCCCEEEEEEcc-------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec-
Confidence 443 44 56665332 3567888977765322 21 111 111111111112233333211
Q ss_pred CCCccCCceEEEeCCCCceeeccc-CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 238 WPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 238 ~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
....+...|..+.....+.. +.....+.....-+++.+++.....+.+.++|.++++-.
T Consensus 318 ----~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 318 ----ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 377 (567)
T ss_dssp ----TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred ----CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 12567788887665433322 111112222233356655544444678999999988644
No 103
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.67 E-value=0.14 Score=43.78 Aligned_cols=189 Identities=11% Similarity=0.046 Sum_probs=98.8
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCc--eeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQ--WQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
.+++++.+.. -..+.++|+.+++ |+.-..-. .........-++++++.+ . ..+..||+ ++
T Consensus 4 ~~~~lv~~~~-------~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~-~--------~~V~~~d~-~G 65 (276)
T 3no2_A 4 PQHLLVGGSG-------WNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY-S--------KGAKMITR-DG 65 (276)
T ss_dssp CCEEEEECTT-------CSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC-B--------SEEEEECT-TS
T ss_pred CCcEEEeeCC-------CCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC-C--------CCEEEECC-CC
Confidence 4677777654 2378899998874 66433211 122223333477888732 1 35899999 45
Q ss_pred --eEEeccCCccccccccEE-EECCEEEEEeCccCCCccCCceEEEeCCCC-ceeec-ccCc--c-CCcceEEEEECCeE
Q 017349 207 --TWTTAAKLRMGLARYDSA-VMGSKMYVTEGWTWPFMFSPRGGVYDINKD-TWNLM-SDGM--K-EGWTGISIVLEGKL 278 (373)
Q Consensus 207 --~W~~~~~~~~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~-~W~~~-~~~~--~-~~~~~~~~~~~~~l 278 (373)
.|+.-.. .....+++. ..+|++++..... ...++.+|++-. .|+.- .... + ..........+|.+
T Consensus 66 ~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~ 138 (276)
T 3no2_A 66 RELWNIAAP--AGCEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY 138 (276)
T ss_dssp CEEEEEECC--TTCEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCE
T ss_pred CEEEEEcCC--CCccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCE
Confidence 3764432 111112222 2377777664431 146788887433 24421 1110 0 11112234456777
Q ss_pred EEEeeCCCcceEEEeCCCC-ceeeecCCCCCCcccccceEEEEeCCEEEEEeCCceeeeeEEEEeecCCcccceEEe
Q 017349 279 FVISEHGDCPMKQYNPDDD-TWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSGLNVAIGRVYEEQNGGISAEWKVM 354 (373)
Q Consensus 279 ~v~gg~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~W~~~ 354 (373)
++... ....+..||++.+ .|+.-.. ..| .......+|.++|++... ..++....+..+..|+.-
T Consensus 139 lv~~~-~~~~v~~~d~~G~~~w~~~~~-~~~------~~~~~~~~g~~~v~~~~~----~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 139 LVPLF-ATSEVREIAPNGQLLNSVKLS-GTP------FSSAFLDNGDCLVACGDA----HCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEEET-TTTEEEEECTTSCEEEEEECS-SCC------CEEEECTTSCEEEECBTT----SEEEEECTTTCCEEEEEE
T ss_pred EEEec-CCCEEEEECCCCCEEEEEECC-CCc------cceeEcCCCCEEEEeCCC----CeEEEEeCcCCcEEEEec
Confidence 76553 3568999999833 4554321 112 123344577888877642 245554455567778854
No 104
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.66 E-value=0.15 Score=50.52 Aligned_cols=177 Identities=7% Similarity=0.035 Sum_probs=89.9
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
..+.+||..+......-... . ....+.....++..+++|+.+ ..+.+||..+++....-... ...-
T Consensus 35 g~v~iwd~~~~~~~~~~~~~--~----~~v~~~~~s~~~~~l~~~~~d-------g~i~vw~~~~~~~~~~~~~~-~~~v 100 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQVT--E----TPVRAGKFIARKNWIIVGSDD-------FRIRVFNYNTGEKVVDFEAH-PDYI 100 (814)
T ss_dssp SEEEEEETTTTEEEEEEECC--S----SCEEEEEEEGGGTEEEEEETT-------SEEEEEETTTCCEEEEEECC-SSCE
T ss_pred CEEEEEECCCCceEEEEecC--C----CcEEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCcEEEEEecC-CCCE
Confidence 35778888776543321111 1 223333444466666676642 27899999887653321111 1111
Q ss_pred eeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCC-eEEeccCCcccccc-ccEEEE--CCEEEEEeCccCCCccCCce
Q 017349 172 FASGN-VNGKIMAVGGTGANINETMTAVECYDPESD-TWTTAAKLRMGLAR-YDSAVM--GSKMYVTEGWTWPFMFSPRG 246 (373)
Q Consensus 172 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~~~-~~~~~~--~~~lyv~gG~~~~~~~~~~i 246 (373)
..++. -++..++.|+.+ ..+.+||..++ ..... +...... ..++.. ++.+++.|+.+ ..+
T Consensus 101 ~~~~~s~~~~~l~~~~~d-------g~i~vw~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~~~d------g~v 165 (814)
T 3mkq_A 101 RSIAVHPTKPYVLSGSDD-------LTVKLWNWENNWALEQT--FEGHEHFVMCVAFNPKDPSTFASGCLD------RTV 165 (814)
T ss_dssp EEEEECSSSSEEEEEETT-------SEEEEEEGGGTSEEEEE--EECCSSCEEEEEEETTEEEEEEEEETT------SEE
T ss_pred EEEEEeCCCCEEEEEcCC-------CEEEEEECCCCceEEEE--EcCCCCcEEEEEEEcCCCCEEEEEeCC------CeE
Confidence 12222 245555566553 35888998776 32221 1111111 122333 45677777665 578
Q ss_pred EEEeCCCCceeecccCcc-CCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCc
Q 017349 247 GVYDINKDTWNLMSDGMK-EGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 247 ~~yd~~~~~W~~~~~~~~-~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
.+||..++.-...-.... .........- ++.+++.|+. ...+..||..+++
T Consensus 166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD-DLTIKIWDYQTKS 219 (814)
T ss_dssp EEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT-TSEEEEEETTTTE
T ss_pred EEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC-CCEEEEEECCCCc
Confidence 999987654322111111 1111111222 6677777665 5689999987764
No 105
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.62 E-value=0.2 Score=47.47 Aligned_cols=202 Identities=12% Similarity=0.050 Sum_probs=100.4
Q ss_pred CCCEEEEEEecCCCCceeEEEeeC--CCCCeeeCCCCCCCCCCCCCceEEEEec----cCCEEEEEcCccCCCCCCccee
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDP--RSGRWFVLPPMPCPKAVCPQAFACTSLP----RQGKLFVLGGMRSDTETPMQST 149 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~v~GG~~~~~~~~~~~~ 149 (373)
.+..||+.+.. ..+.+||+ .+.+- +..++... .-.+.+... .++.+|+..-. .+.+
T Consensus 189 dg~~l~v~~~d-----~~V~v~D~~~~t~~~--~~~i~~g~----~p~~va~sp~~~~dg~~l~v~~~~-------~~~v 250 (543)
T 1nir_A 189 SGRYLLVIGRD-----ARIDMIDLWAKEPTK--VAEIKIGI----EARSVESSKFKGYEDRYTIAGAYW-------PPQF 250 (543)
T ss_dssp TSCEEEEEETT-----SEEEEEETTSSSCEE--EEEEECCS----EEEEEEECCSTTCTTTEEEEEEEE-------SSEE
T ss_pred CCCEEEEECCC-----CeEEEEECcCCCCcE--EEEEecCC----CcceEEeCCCcCCCCCEEEEEEcc-------CCeE
Confidence 35567765431 56888998 55432 22333111 123333322 25566665322 2368
Q ss_pred EEEeCCCCceec-cCC--C--------CCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccc
Q 017349 150 IMYRATTNQWQL-ASP--M--------LTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMG 217 (373)
Q Consensus 150 ~~yd~~t~~W~~-~~~--~--------~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 217 (373)
.++|..+.+-.+ ++. + +.+|.......- +..+|+.... ...+.++|..+.+-..+..++..
T Consensus 251 ~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-------~g~i~vvd~~~~~~l~~~~i~~~ 323 (543)
T 1nir_A 251 AIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-------TGKVLLVNYKDIDNLTVTSIGAA 323 (543)
T ss_dssp EEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT-------TTEEEEEECTTSSSCEEEEEECC
T ss_pred EEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC-------CCeEEEEEecCCCcceeEEeccC
Confidence 889988765322 221 1 111222222222 3445544322 24688888876532111122223
Q ss_pred cccccEEEE-CCE-EEEEeCccCCCccCCceEEEeCCCCceeec-cc-CccCCcceEEEEE--CCeEEEEeeCCCcceEE
Q 017349 218 LARYDSAVM-GSK-MYVTEGWTWPFMFSPRGGVYDINKDTWNLM-SD-GMKEGWTGISIVL--EGKLFVISEHGDCPMKQ 291 (373)
Q Consensus 218 ~~~~~~~~~-~~~-lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~-~~-~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~ 291 (373)
..-+..+.. +|+ +|+.+..+ +.+.++|..+++-... .. ..|-+..+..... ++.+|+.+..+...+.+
T Consensus 324 ~~~~~~~~spdg~~l~va~~~~------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v 397 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANNS------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISL 397 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGGG------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEE
T ss_pred cCccCceECCCCCEEEEEecCC------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEE
Confidence 333333333 565 55554333 5788999998864332 21 1111112222333 47788876544568889
Q ss_pred EeCCCC-----ceeeecCCCCC
Q 017349 292 YNPDDD-----TWRYVGGDKFP 308 (373)
Q Consensus 292 yd~~~~-----~W~~~~~~~~~ 308 (373)
||.++. .|+.+..++.+
T Consensus 398 ~d~~~~~~~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 398 IGTDPKNHPQYAWKKVAELQGQ 419 (543)
T ss_dssp EECCTTTCTTTBTSEEEEEECS
T ss_pred EEeCCCCCchhcCeEEEEEEcC
Confidence 988762 38887765543
No 106
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.62 E-value=0.31 Score=42.37 Aligned_cols=203 Identities=13% Similarity=0.020 Sum_probs=103.7
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+.+.. ...+++||+.+.+...+...+ .. .-.+. ....++++|+...... .....+++||+.+
T Consensus 55 ~g~l~~~~~~----~~~i~~~d~~~~~~~~~~~~~-~~----~~~~i-~~~~dg~l~v~~~~~~---~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 55 QGQLFLLDVF----EGNIFKINPETKEIKRPFVSH-KA----NPAAI-KIHKDGRLFVCYLGDF---KSTGGIFAATENG 121 (333)
T ss_dssp TSCEEEEETT----TCEEEEECTTTCCEEEEEECS-SS----SEEEE-EECTTSCEEEEECTTS---SSCCEEEEECTTS
T ss_pred CCCEEEEECC----CCEEEEEeCCCCcEEEEeeCC-CC----CcceE-EECCCCcEEEEeCCCC---CCCceEEEEeCCC
Confidence 4557776532 246889999988876653211 11 12233 3334778888754311 1124799999988
Q ss_pred Cceec-cCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CC-EEEE
Q 017349 157 NQWQL-ASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GS-KMYV 232 (373)
Q Consensus 157 ~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~-~lyv 232 (373)
+..+. +...........++. -++++|+..... ........++++|+.+++.+.+..- .......+.. ++ .||+
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v 198 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG-YSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWV 198 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCC-BTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEE
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEeccc-cccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEE
Confidence 87653 222111111222222 257888764321 0112245789999888766554210 0011122222 45 4777
Q ss_pred EeCccCCCccCCceEEEeCCCC--ceeeccc----CccCCcceEEEE--ECCeEEEEeeCCCcceEEEeCCCCceeee
Q 017349 233 TEGWTWPFMFSPRGGVYDINKD--TWNLMSD----GMKEGWTGISIV--LEGKLFVISEHGDCPMKQYNPDDDTWRYV 302 (373)
Q Consensus 233 ~gG~~~~~~~~~~i~~yd~~~~--~W~~~~~----~~~~~~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~~~W~~~ 302 (373)
..... ..+.+||..++ ....+.. ..........+. -+|+||+.... ...+.+||++.+.-..+
T Consensus 199 ~~~~~------~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-~~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 199 TETTA------NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-QGRVLVFNKRGYPIGQI 269 (333)
T ss_dssp EEGGG------TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-TTEEEEECTTSCEEEEE
T ss_pred EeCCC------CeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-CCEEEEECCCCCEEEEE
Confidence 65433 57899998642 2322110 011111111223 36788887643 45799999965544444
No 107
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.60 E-value=0.14 Score=45.53 Aligned_cols=144 Identities=13% Similarity=-0.027 Sum_probs=77.8
Q ss_pred EEEEEcCccCCCCCCcceeEEEeCCCCceeccCCC-CCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCe
Q 017349 131 KLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPM-LTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDT 207 (373)
Q Consensus 131 ~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 207 (373)
.+++.|+.+ ..+.+||..+.+....-.. .....-..+... ++.+++.|+.+ ..+.+||..++.
T Consensus 87 ~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~ 152 (383)
T 3ei3_B 87 TTVAVGSKG-------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-------GATTLRDFSGSV 152 (383)
T ss_dssp TEEEEEEBT-------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-------TEEEEEETTSCE
T ss_pred CEEEEEcCC-------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-------CEEEEEECCCCc
Confidence 566666652 2688999988776544332 122222233333 34666666654 468899998876
Q ss_pred EEeccCCcccccc-ccEEE-ECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCe-EEEEeeC
Q 017349 208 WTTAAKLRMGLAR-YDSAV-MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGK-LFVISEH 284 (373)
Q Consensus 208 W~~~~~~~~~~~~-~~~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-l~v~gg~ 284 (373)
...+......... ...+. -++++++.|+.+ ..+..||+....-..+.. ........+..-+++ +++.|+.
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKL-HKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEEC-SSSCEEEEEECSSCTTEEEEEET
T ss_pred eEEEeccCCCCCCeEEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEecc-CCCcEEEEEECCCCCCEEEEEeC
Confidence 6555332211111 12222 266777777665 578999985443333221 111111111122444 6777665
Q ss_pred CCcceEEEeCCC
Q 017349 285 GDCPMKQYNPDD 296 (373)
Q Consensus 285 ~~~~~~~yd~~~ 296 (373)
...+..||..+
T Consensus 226 -d~~i~iwd~~~ 236 (383)
T 3ei3_B 226 -DATVKLWDLRN 236 (383)
T ss_dssp -TSEEEEEEGGG
T ss_pred -CCEEEEEeCCC
Confidence 56889999876
No 108
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.099 Score=45.88 Aligned_cols=181 Identities=10% Similarity=0.063 Sum_probs=85.6
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCce----eccCCCCC-
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQW----QLASPMLT- 167 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W----~~~~~~~~- 167 (373)
.+.+||..+.+.......+ ....+.....++..++.++.... .....+.+||..+..- ......+.
T Consensus 97 ~i~iwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~~~~--~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWKSP-------VPVKRVEFSPCGNYFLAILDNVM--KNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp EEEEEETTTCCEEEEEECS-------SCEEEEEECTTSSEEEEEECCBT--TBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred eEEEEECCCCcEEEEeecC-------CCeEEEEEccCCCEEEEecCCcc--CCCCEEEEEEecCCccceeecccccceee
Confidence 4778888877654432222 22333334445666655543200 1223677787665531 11111010
Q ss_pred ----cc---eeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCC-CeEEeccCCccccccccEEEE--CCEEEEEeCc
Q 017349 168 ----PR---SFFASGN-VNGKIMAVGGTGANINETMTAVECYDPES-DTWTTAAKLRMGLARYDSAVM--GSKMYVTEGW 236 (373)
Q Consensus 168 ----~r---~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~ 236 (373)
.. ....++. -+++.++.|+.+ ..+.+||..+ ..-... +.........+.+ ++.+++.++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWSTKGKYIIAGHKD-------GKISKYDVSNNYEYVDS--IDLHEKSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp EEECCTTCCCEEEEEECGGGCEEEEEETT-------SEEEEEETTTTTEEEEE--EECCSSCEEEEEECTTSSEEEEEET
T ss_pred eccCCcCccceeEEEEcCCCCEEEEEcCC-------CEEEEEECCCCcEeEEE--EecCCCceeEEEECCCCCEEEEecC
Confidence 00 1111111 245566666654 3688999987 332211 1111111112222 6666667765
Q ss_pred cCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCC-------------cceEEEeCCCCc
Q 017349 237 TWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGD-------------CPMKQYNPDDDT 298 (373)
Q Consensus 237 ~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~-------------~~~~~yd~~~~~ 298 (373)
+ ..+.+||..+.+-...-. ........+..-+++.+++|+... ..+..||..+.+
T Consensus 239 d------~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 306 (369)
T 3zwl_B 239 D------TNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE 306 (369)
T ss_dssp T------SEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC
T ss_pred C------ceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc
Confidence 5 578999998876433211 111111222223555666655431 167788876653
No 109
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.56 E-value=0.31 Score=41.76 Aligned_cols=111 Identities=13% Similarity=0.157 Sum_probs=60.9
Q ss_pred EEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCc-ceeeeeeEe---CCeEEEEcCCCCCCCCcCceEE
Q 017349 124 TSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTP-RSFFASGNV---NGKIMAVGGTGANINETMTAVE 199 (373)
Q Consensus 124 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~ 199 (373)
..+..+++.++.|+.++ .+.+||..++..+.+..+... ..-.++... ++.+++.|+.+ ..+.
T Consensus 15 ~~~s~~g~~las~s~D~-------~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-------~~v~ 80 (297)
T 2pm7_B 15 AVMDYYGKRMATCSSDK-------TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVM 80 (297)
T ss_dssp EEECTTSSEEEEEETTS-------CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-------TEEE
T ss_pred EEECCCCCEEEEEeCCC-------EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-------CEEE
Confidence 33444677777777522 578888776543333222211 111222222 25677777765 4688
Q ss_pred EEeCCCCeEEeccCCccccccccEEEE--C--CEEEEEeCccCCCccCCceEEEeCCCC
Q 017349 200 CYDPESDTWTTAAKLRMGLARYDSAVM--G--SKMYVTEGWTWPFMFSPRGGVYDINKD 254 (373)
Q Consensus 200 ~yd~~t~~W~~~~~~~~~~~~~~~~~~--~--~~lyv~gG~~~~~~~~~~i~~yd~~~~ 254 (373)
++|..++.|..+..+.........+.. + +.+++.|+.+ ..+.+||..++
T Consensus 81 iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~~~ 133 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFKEN 133 (297)
T ss_dssp EEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBCSS
T ss_pred EEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEecCC
Confidence 999988877655433222111222222 2 5667777665 57888888765
No 110
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.54 E-value=0.38 Score=42.57 Aligned_cols=204 Identities=13% Similarity=0.122 Sum_probs=116.0
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
..+..+++.......+..-. ....+.+....++.||+..- ....++++++.....+.+...... ..
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~------~~~~~l~~d~~~~~ly~~D~-------~~~~I~r~~~~g~~~~~~~~~~~~-~p 118 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNL------ENAIALDFHHRRELVFWSDV-------TLDRILRANLNGSNVEEVVSTGLE-SP 118 (349)
T ss_dssp SCEEEECTTSCCEEEEECSC------SCEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEECSSCS-CC
T ss_pred cceEEEeCCCCeeEEeecCC------CceEEEEEeccccEEEEEec-------cCCceEEEecCCCCceEEEeCCCC-Cc
Confidence 34778888877766543211 12345555545789998843 234799999987765443221111 11
Q ss_pred eeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc--CCccccccccEEEE--CCEEEEEeCccCCCccCCc
Q 017349 172 FASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAA--KLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPR 245 (373)
Q Consensus 172 ~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~ 245 (373)
.++++ .++.||+.-.. ...++++++....-+.+. .+..| ...++. ++.||+.--.. ...
T Consensus 119 ~glavd~~~g~ly~~d~~-------~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~-----~~~ 183 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN-----TPR 183 (349)
T ss_dssp CEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS-----SCE
T ss_pred cEEEEecCCCeEEEEcCC-------CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC-----CCE
Confidence 23333 47899987543 246888988765433332 22222 223343 67899874221 257
Q ss_pred eEEEeCCCCceeecccCccCCcceEEEE--ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCC
Q 017349 246 GGVYDINKDTWNLMSDGMKEGWTGISIV--LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEG 323 (373)
Q Consensus 246 i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 323 (373)
|+++++....-+.+.. .....-...++ .+++||+.... ...|+++|++...-..+..... ....+++..++
T Consensus 184 I~r~~~dG~~~~~~~~-~~~~~PnGla~d~~~~~lY~aD~~-~~~I~~~~~dG~~~~~~~~~~~-----~~P~giav~~~ 256 (349)
T 3v64_C 184 IEASSMDGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAK-HHVIERANLDGSHRKAVISQGL-----PHPFAITVFED 256 (349)
T ss_dssp EEEEETTSCSCEESCC-SSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEECSSC-----SSEEEEEEETT
T ss_pred EEEEeCCCCCcEEEEE-CCCCCcceEEEeCCCCEEEEEECC-CCEEEEEeCCCCceEEEEeCCC-----CCceEEEEECC
Confidence 9999987544333321 11111122233 37889998643 5689999987543333322121 24577877899
Q ss_pred EEEEEeCC
Q 017349 324 KIYVVSSG 331 (373)
Q Consensus 324 ~l~i~GG~ 331 (373)
.||+..-.
T Consensus 257 ~ly~td~~ 264 (349)
T 3v64_C 257 SLYWTDWH 264 (349)
T ss_dssp EEEEEETT
T ss_pred EEEEecCC
Confidence 99998754
No 111
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.50 E-value=0.046 Score=48.29 Aligned_cols=157 Identities=13% Similarity=0.220 Sum_probs=85.8
Q ss_pred EeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCC--CcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEE
Q 017349 125 SLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPML--TPRSFFASGN-VNGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 125 ~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~--~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
....++.+++.||.++ .+.+||..++.|.....+. ....-..++. -+++.++.|+.+ ..+.++
T Consensus 23 ~~sp~g~~las~~~D~-------~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-------~~v~iw 88 (345)
T 3fm0_A 23 AWNPAGTLLASCGGDR-------RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-------ATTCIW 88 (345)
T ss_dssp EECTTSSCEEEEETTS-------CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-------SCEEEE
T ss_pred EECCCCCEEEEEcCCC-------eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-------CcEEEE
Confidence 3344677777777522 5788888888765332211 1111222222 256677777765 347788
Q ss_pred eCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCc-eeecccCccCCcceE-EEEE--C
Q 017349 202 DPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDT-WNLMSDGMKEGWTGI-SIVL--E 275 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~-W~~~~~~~~~~~~~~-~~~~--~ 275 (373)
|..++.++.+..+......-..+.. ++++++.|+.+ ..+.+||..++. +..+.. ........ .+.. +
T Consensus 89 ~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD------KSVWVWEVDEEDEYECVSV-LNSHTQDVKHVVWHPS 161 (345)
T ss_dssp EECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT------SCEEEEEECTTSCEEEEEE-ECCCCSCEEEEEECSS
T ss_pred EccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC------CeEEEEECCCCCCeEEEEE-ecCcCCCeEEEEECCC
Confidence 8877766554433322222222222 67777777766 578899987653 332221 11111111 1222 5
Q ss_pred CeEEEEeeCCCcceEEEeCCCCceeeec
Q 017349 276 GKLFVISEHGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 276 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~ 303 (373)
+++++.|+. ...+..||..++.|..+.
T Consensus 162 ~~~l~s~s~-d~~i~~w~~~~~~~~~~~ 188 (345)
T 3fm0_A 162 QELLASASY-DDTVKLYREEEDDWVCCA 188 (345)
T ss_dssp SSCEEEEET-TSCEEEEEEETTEEEEEE
T ss_pred CCEEEEEeC-CCcEEEEEecCCCEEEEE
Confidence 666666665 567889998888877544
No 112
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.49 E-value=0.35 Score=41.43 Aligned_cols=193 Identities=14% Similarity=0.235 Sum_probs=91.4
Q ss_pred CEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe--C--CeEEEEcCCCCCCCCcCceEEEEeCCC
Q 017349 130 GKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV--N--GKIMAVGGTGANINETMTAVECYDPES 205 (373)
Q Consensus 130 ~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~~yd~~t 205 (373)
+.+++.|+.+ ..+.+||..+++|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+
T Consensus 67 g~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-------~~v~~wd~~~ 132 (297)
T 2pm7_B 67 GTILASCSYD-------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-------GKVSVVEFKE 132 (297)
T ss_dssp CSEEEEEETT-------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SEEEEEEBCS
T ss_pred CCEEEEEcCC-------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-------CcEEEEEecC
Confidence 5677777652 2688999988877655433211111122222 1 4566666654 3577788766
Q ss_pred Ce-EEeccCCccccccccEEEE---------------CCEEEEEeCccCCCccCCceEEEeCCCCc--eeecccCccCCc
Q 017349 206 DT-WTTAAKLRMGLARYDSAVM---------------GSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKEGW 267 (373)
Q Consensus 206 ~~-W~~~~~~~~~~~~~~~~~~---------------~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~ 267 (373)
+. +... .+.........+.. ++++++.|+.+ ..+..||..++. |..... +....
T Consensus 133 ~~~~~~~-~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D------~~v~lwd~~~~~~~~~~~~~-l~~H~ 204 (297)
T 2pm7_B 133 NGTTSPI-IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQTYVLEST-LEGHS 204 (297)
T ss_dssp SSCBCCE-EEECCSSCEEEEEECCCC------------CCEEEEEETT------SCEEEEEEETTTTEEEEEEE-ECCCS
T ss_pred CCceeee-eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCC------CcEEEEEEcCCCceEEEEEE-ecCCC
Confidence 52 2110 00000000001111 24567777766 568888876643 543322 11111
Q ss_pred ce-EEEEE--C---CeEEEEeeCCCcceEEEeCCCC--ceeeecC--CCCCCcccccceEE-EEeCCEEEEEeCCceeee
Q 017349 268 TG-ISIVL--E---GKLFVISEHGDCPMKQYNPDDD--TWRYVGG--DKFPCEVMHRPFAV-NGVEGKIYVVSSGLNVAI 336 (373)
Q Consensus 268 ~~-~~~~~--~---~~l~v~gg~~~~~~~~yd~~~~--~W~~~~~--~~~~~~~~~~~~~~-~~~~~~l~i~GG~~~~~~ 336 (373)
.. .++.+ + +.+++.|+. ...+..||..+. .|..... ...+ ....++ ...++++++.||... .
T Consensus 205 ~~V~~v~~sp~~~~~~~las~s~-D~~v~iWd~~~~~~~~~~~~~~~~~~~----~~v~~~~~s~~g~~las~~~D~--~ 277 (297)
T 2pm7_B 205 DWVRDVAWSPTVLLRSYMASVSQ-DRTCIIWTQDNEQGPWKKTLLKEEKFP----DVLWRASWSLSGNVLALSGGDN--K 277 (297)
T ss_dssp SCEEEEEECCCCSSSEEEEEEET-TSCEEEEEESSTTSCCEEEESSSSCCS----SCEEEEEECSSSCCEEEEETTS--C
T ss_pred CceEEEEECCCCCCceEEEEEEC-CCcEEEEEeCCCCCccceeeeecccCC----CcEEEEEECCCCCEEEEEcCCC--c
Confidence 11 11333 2 356666654 567888887653 4543211 1111 112222 234677777776422 2
Q ss_pred eEEEEeecCCcccceEEe
Q 017349 337 GRVYEEQNGGISAEWKVM 354 (373)
Q Consensus 337 ~~~~~~~~d~~~~~W~~~ 354 (373)
..+++ .+. ...|+.+
T Consensus 278 v~lw~--~~~-~g~w~~~ 292 (297)
T 2pm7_B 278 VTLWK--ENL-EGKWEPA 292 (297)
T ss_dssp EEEEE--ECT-TSCEEEC
T ss_pred EEEEE--ECC-CCcEEec
Confidence 34444 222 2467754
No 113
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.48 E-value=0.37 Score=41.69 Aligned_cols=194 Identities=12% Similarity=0.089 Sum_probs=89.6
Q ss_pred CEEEEEEecCCCCceeEEEeeCC-CCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC-
Q 017349 78 PYLFIFSFHKPTARIQWQALDPR-SGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT- 155 (373)
Q Consensus 78 ~~l~~~gg~~~~~~~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~- 155 (373)
..+|+.++. ...+.+||.. +.+...+..++... .....+....++.||+.+.. ...+.+|+..
T Consensus 5 ~~l~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~~~~-------~~~v~~~~~~~ 69 (343)
T 1ri6_A 5 QTVYIASPE----SQQIHVWNLNHEGALTLTQVVDVPG----QVQPMVVSPDKRYLYVGVRP-------EFRVLAYRIAP 69 (343)
T ss_dssp EEEEEEEGG----GTEEEEEEECTTSCEEEEEEEECSS----CCCCEEECTTSSEEEEEETT-------TTEEEEEEECT
T ss_pred EEEEEeCCC----CCeEEEEEECCCCcEEEeeeEecCC----CCceEEECCCCCEEEEeecC-------CCeEEEEEecC
Confidence 455655332 2346677764 34444332222111 11223333324456665432 1367777665
Q ss_pred -CCceeccCCCCCcceeeeeeEe-CC-eEEEEcCCCCCCCCcCceEEEEeCCCCe-EEeccCCccccccccEEEE-CC-E
Q 017349 156 -TNQWQLASPMLTPRSFFASGNV-NG-KIMAVGGTGANINETMTAVECYDPESDT-WTTAAKLRMGLARYDSAVM-GS-K 229 (373)
Q Consensus 156 -t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~~~~~~~~~-~~-~ 229 (373)
+++++.+..++.......++.. ++ .+|+.+..+ ..+.+||...+. .+.+...+........+.. ++ .
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 142 (343)
T 1ri6_A 70 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA-------GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRT 142 (343)
T ss_dssp TTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT-------TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSE
T ss_pred CCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC-------CeEEEEECCCCccccccccccCCCCceEEEECCCCCE
Confidence 7777765544322222223332 34 466654322 357888874322 2222222222122223333 44 4
Q ss_pred EEEEeCccCCCccCCceEEEeCCC-Cceeecc--c-CccCCcceEEEEE--CCe-EEEEeeCCCcceEEEeCC--CCcee
Q 017349 230 MYVTEGWTWPFMFSPRGGVYDINK-DTWNLMS--D-GMKEGWTGISIVL--EGK-LFVISEHGDCPMKQYNPD--DDTWR 300 (373)
Q Consensus 230 lyv~gG~~~~~~~~~~i~~yd~~~-~~W~~~~--~-~~~~~~~~~~~~~--~~~-l~v~gg~~~~~~~~yd~~--~~~W~ 300 (373)
||+.+..+ ..+.+||+.+ ++...+. . ..+.......+.+ +++ +|+.+. ....+.+||.. ++++.
T Consensus 143 l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~-~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 143 LWVPALKQ------DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE-LNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp EEEEEGGG------TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET-TTTEEEEEESSCTTSCCE
T ss_pred EEEecCCC------CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC-CCCEEEEEEecCCCCcEE
Confidence 66655333 4789999987 6665332 1 1111111112223 454 666553 35678888884 45554
No 114
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.48 E-value=0.32 Score=48.05 Aligned_cols=183 Identities=6% Similarity=-0.040 Sum_probs=93.2
Q ss_pred EEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC------Ccee------c
Q 017349 94 WQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT------NQWQ------L 161 (373)
Q Consensus 94 ~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t------~~W~------~ 161 (373)
+..||+.++++..................+.....++.|++..- ..-+++||+.+ ..+. .
T Consensus 394 L~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~--------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 465 (758)
T 3ott_A 394 INRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTC--------LGGIFVVDKHKLMQSTSGQYIAEQNYSV 465 (758)
T ss_dssp EEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEES--------SSCEEEEEHHHHHHCCSSEEECSEEECG
T ss_pred HhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEEC--------CCceEEEccccccccCCcceeccccccc
Confidence 67899998888765321100000001112222233678888421 11477887653 1121 0
Q ss_pred cCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccc-cccccEEEE--CCEEEEEeCcc
Q 017349 162 ASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMG-LARYDSAVM--GSKMYVTEGWT 237 (373)
Q Consensus 162 ~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-~~~~~~~~~--~~~lyv~gG~~ 237 (373)
...++... ..++.. -++.|++++|.. ..+.+||+.+++++....-... .....+... +|.|++...
T Consensus 466 ~~~l~~~~-i~~i~~d~~g~lWi~~~t~-------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~-- 535 (758)
T 3ott_A 466 HNGLSGMF-INQIIPDNEGNVWVLLYNN-------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFH-- 535 (758)
T ss_dssp GGTCSCSC-EEEEEECTTSCEEEEETTC-------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEET--
T ss_pred ccccccce-eeeEEEcCCCCEEEEccCC-------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEec--
Confidence 11121111 112222 257899866653 2488999999998876321111 111112222 577876432
Q ss_pred CCCccCCceEEEeCCCCceeeccc-CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeec
Q 017349 238 WPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 238 ~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~ 303 (373)
..+.+||+.+++++.+.. .++.......+.-+|+|++... ..+.+||+++.+.....
T Consensus 536 ------~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~~g~lWi~t~---~Gl~~~~~~~~~~~~~~ 593 (758)
T 3ott_A 536 ------GGVMRINPKDESQQSISFGSFSNNEILSMTCVKNSIWVSTT---NGLWIIDRKTMDARQQN 593 (758)
T ss_dssp ------TEEEEECC--CCCCBCCCCC---CCEEEEEEETTEEEEEES---SCEEEEETTTCCEEEC-
T ss_pred ------CceEEEecCCCceEEecccCCCccceEEEEECCCCEEEECC---CCeEEEcCCCceeEEec
Confidence 358999999998876532 1222222222344788887653 37899999998877643
No 115
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.47 E-value=0.39 Score=41.88 Aligned_cols=214 Identities=9% Similarity=0.042 Sum_probs=112.2
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC--ceeccCCCC---
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN--QWQLASPML--- 166 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~~--- 166 (373)
..+.++|+.+.+........ ....-.+.++. .++.||+.... ...+.+||+..+ .-..+....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~----~~~~p~gia~d-~~g~l~v~d~~-------~~~v~~~~~~g~~~~~~~~~~~~~~g 136 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKN----LFYLPHGLSID-TDGNYWVTDVA-------LHQVFKLDPHSKEGPLLILGRSMQPG 136 (329)
T ss_dssp CCEEEECTTTCCEEEEECTT----TCSSEEEEEEC-TTSCEEEEETT-------TTEEEEECTTCSSCCSEEESBTTBCC
T ss_pred CcEEEEECCCCeEEeccCCC----ccCCceEEEEC-CCCCEEEEECC-------CCEEEEEeCCCCeEEEEEecccCCCC
Confidence 35888999877764322111 01122444444 36779988643 237999998765 222232110
Q ss_pred ---Cc-ceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCC-------ccccccc-cEEEE-C-CEE
Q 017349 167 ---TP-RSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKL-------RMGLARY-DSAVM-G-SKM 230 (373)
Q Consensus 167 ---~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-------~~~~~~~-~~~~~-~-~~l 230 (373)
.. .....+++. ++.||+..+.. ...+.+||+....-..+... +.....+ ..++. + +.|
T Consensus 137 ~~~~~~~~P~~ia~~~~~g~lyv~d~~~------~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 137 SDQNHFCQPTDVAVEPSTGAVFVSDGYC------NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp CSTTCCSSEEEEEECTTTCCEEEEECSS------CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred CCccccCCCcEEEEeCCCCeEEEEeCCC------CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 01 122334443 68999987531 24688999655543333211 1111222 23333 4 899
Q ss_pred EEEeCccCCCccCCceEEEeCCCCceeec-ccCccCCcceEEEEECCeEEEEeeC------CCcceEEEeCCCCceeeec
Q 017349 231 YVTEGWTWPFMFSPRGGVYDINKDTWNLM-SDGMKEGWTGISIVLEGKLFVISEH------GDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 231 yv~gG~~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~l~v~gg~------~~~~~~~yd~~~~~W~~~~ 303 (373)
|+..... ..|.+||+.+++.... ..+.........+...+.+|...|. ....+.++|..+++....-
T Consensus 211 ~v~d~~~------~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 211 CVADREN------GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp EEEETTT------TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred EEEECCC------CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 9987554 6899999987766432 2111111111112233555555442 1458899998877665442
Q ss_pred CCCCCCcccccceEEEE-eCCEEEEEeCC
Q 017349 304 GDKFPCEVMHRPFAVNG-VEGKIYVVSSG 331 (373)
Q Consensus 304 ~~~~~~~~~~~~~~~~~-~~~~l~i~GG~ 331 (373)
. +.+ .......+++. -+|.|||....
T Consensus 285 ~-~~~-~~~~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 285 K-PVR-KHFDMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp C-CSS-SCCSSEEEEEECTTSEEEEEESS
T ss_pred c-CCC-CccCCeeEEEECCCCCEEEEECC
Confidence 1 111 11133455554 36789998864
No 116
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.47 E-value=0.17 Score=42.66 Aligned_cols=188 Identities=11% Similarity=-0.021 Sum_probs=93.5
Q ss_pred eEEEeeCCC-CCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 93 QWQALDPRS-GRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 93 ~~~~~d~~~-~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
.++++|..+ .+...+...... .......+..+++.+++++... .....++.+|..++..+.+..... .
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~---~ 131 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFAT-----ICNNDHGISPDGALYAISDKVE---FGKSAIYLLPSTGGTPRLMTKNLP---S 131 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCC-----CBCSCCEECTTSSEEEEEECTT---TSSCEEEEEETTCCCCEECCSSSS---E
T ss_pred eEEEEeCCCCCCceEecccccc-----ccccceEECCCCCEEEEEEeCC---CCcceEEEEECCCCceEEeecCCC---c
Confidence 688899988 776665433211 1111222333555555554321 134589999988877555543321 2
Q ss_pred eeeeEe-CC-eEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEE-ECCE-EEEEeCccCCCccCCceE
Q 017349 172 FASGNV-NG-KIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAV-MGSK-MYVTEGWTWPFMFSPRGG 247 (373)
Q Consensus 172 ~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~~~-lyv~gG~~~~~~~~~~i~ 247 (373)
..+... ++ .|++.++.+ ....++.+|..+...+.+...+... ..... -+++ |++.+..+ ....++
T Consensus 132 ~~~~~spdg~~l~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~----~~~~i~ 200 (297)
T 2ojh_A 132 YWHGWSPDGKSFTYCGIRD-----QVFDIYSMDIDSGVETRLTHGEGRN--DGPDYSPDGRWIYFNSSRT----GQMQIW 200 (297)
T ss_dssp EEEEECTTSSEEEEEEEET-----TEEEEEEEETTTCCEEECCCSSSCE--EEEEECTTSSEEEEEECTT----SSCEEE
T ss_pred cceEECCCCCEEEEEECCC-----CceEEEEEECCCCcceEcccCCCcc--ccceECCCCCEEEEEecCC----CCccEE
Confidence 222222 34 455444433 1235677778777766654332211 11222 2555 44444322 124677
Q ss_pred EEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCC----------CcceEEEeCCCCceeeec
Q 017349 248 VYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHG----------DCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 248 ~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~----------~~~~~~yd~~~~~W~~~~ 303 (373)
.++...+....+.. ...........-+++.+++++.. ...+++||.++++...+.
T Consensus 201 ~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 201 RVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp EEETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred EECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 77777766655543 11111111112255544444331 246999999888776554
No 117
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.42 E-value=0.42 Score=41.68 Aligned_cols=216 Identities=12% Similarity=0.032 Sum_probs=107.8
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.+|+.+.. ...++.||+.++....+. .+ ..........++.+++... ..+++||+.+
T Consensus 60 ~~~l~~~d~~----~~~i~~~d~~~~~~~~~~-~~-------~~v~~i~~~~dg~l~v~~~---------~gl~~~d~~~ 118 (326)
T 2ghs_A 60 SGTAWWFNIL----ERELHELHLASGRKTVHA-LP-------FMGSALAKISDSKQLIASD---------DGLFLRDTAT 118 (326)
T ss_dssp TTEEEEEEGG----GTEEEEEETTTTEEEEEE-CS-------SCEEEEEEEETTEEEEEET---------TEEEEEETTT
T ss_pred CCEEEEEECC----CCEEEEEECCCCcEEEEE-CC-------CcceEEEEeCCCeEEEEEC---------CCEEEEECCC
Confidence 4677776543 346889999887655432 22 1122222333788887642 2599999999
Q ss_pred CceeccCCCCC----cceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CC-EE
Q 017349 157 NQWQLASPMLT----PRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GS-KM 230 (373)
Q Consensus 157 ~~W~~~~~~~~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~-~l 230 (373)
++.+.+..... .+.......-++++|+..... ........+++|| +++.+.+.. ........+.. ++ .+
T Consensus 119 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~-~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 119 GVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGR-KAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTG 193 (326)
T ss_dssp CCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEET-TCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEE
T ss_pred CcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCC-cCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEE
Confidence 88776543321 122222222357777643111 0122345788888 566554421 00011122222 45 57
Q ss_pred EEEeCccCCCccCCceEEEeCC--CC-ceee---cccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeee
Q 017349 231 YVTEGWTWPFMFSPRGGVYDIN--KD-TWNL---MSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYV 302 (373)
Q Consensus 231 yv~gG~~~~~~~~~~i~~yd~~--~~-~W~~---~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~ 302 (373)
|+..... ..+++||.. ++ .... +............+.+ +|.||+.... ...+.+||++.+.-..+
T Consensus 194 yv~~~~~------~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~-~~~v~~~d~~g~~~~~i 266 (326)
T 2ghs_A 194 YFVDTKV------NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG-EGAVDRYDTDGNHIARY 266 (326)
T ss_dssp EEEETTT------CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET-TTEEEEECTTCCEEEEE
T ss_pred EEEECCC------CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC-CCEEEEECCCCCEEEEE
Confidence 7765332 578999975 54 3211 1110001111112333 6788886532 34799999965443444
Q ss_pred cCCCCCCcccccceEEEEe---CCEEEEEeCC
Q 017349 303 GGDKFPCEVMHRPFAVNGV---EGKIYVVSSG 331 (373)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~---~~~l~i~GG~ 331 (373)
. .+. ....+++.. ++.|||....
T Consensus 267 ~---~~~---~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 267 E---VPG---KQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp E---CSC---SBEEEEEEESTTSCEEEEEEBC
T ss_pred E---CCC---CCcEEEEEecCCCCEEEEEecC
Confidence 3 331 122333332 2568877654
No 118
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.41 E-value=0.54 Score=45.87 Aligned_cols=201 Identities=14% Similarity=0.090 Sum_probs=102.2
Q ss_pred CCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCC------CCCcceeEEEeCCCCcee-
Q 017349 88 PTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDT------ETPMQSTIMYRATTNQWQ- 160 (373)
Q Consensus 88 ~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~------~~~~~~~~~yd~~t~~W~- 160 (373)
.....+++++|..+++......++ . ..+.......+++.++++...... ......+++++..+..-.
T Consensus 143 G~~~~~i~v~dl~tg~~~~~~~~~--~----~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~ 216 (695)
T 2bkl_A 143 AADEAVLHVIDVDSGEWSKVDVIE--G----GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKD 216 (695)
T ss_dssp TCSCCEEEEEETTTCCBCSSCCBS--C----CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGC
T ss_pred CCceEEEEEEECCCCCCcCCcccC--c----ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhc
Confidence 334467899999988764111222 1 111233344466655555432110 012446999999887632
Q ss_pred -ccCCCCC-cceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCcc
Q 017349 161 -LASPMLT-PRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWT 237 (373)
Q Consensus 161 -~~~~~~~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~ 237 (373)
.+...+. +....+... -+++..++...+ .. ....++.+|..+..++.+..-.... ...+..+|.+|+....+
T Consensus 217 ~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~--~~-~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~ 291 (695)
T 2bkl_A 217 TVVHERTGDPTTFLQSDLSRDGKYLFVYILR--GW-SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEG 291 (695)
T ss_dssp EEEECCCCCTTCEEEEEECTTSCCEEEEEEE--TT-TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTT
T ss_pred eEEEecCCCCEEEEEEEECCCCCEEEEEEeC--CC-CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCC
Confidence 2222221 122222222 244444443332 11 2456788887777787764322211 12223566666654322
Q ss_pred CCCccCCceEEEeCCCCc---eeecccCccCCcceEEEEECCeEEEEeeCC-CcceEEEeCCCCceeee
Q 017349 238 WPFMFSPRGGVYDINKDT---WNLMSDGMKEGWTGISIVLEGKLFVISEHG-DCPMKQYNPDDDTWRYV 302 (373)
Q Consensus 238 ~~~~~~~~i~~yd~~~~~---W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~-~~~~~~yd~~~~~W~~~ 302 (373)
.....++.+|+.+.. |+.+-...+..........+++|++....+ ...++.+|+..+.-..+
T Consensus 292 ---~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 292 ---APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp ---CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred ---CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 223578999997765 877653222222222234488888876543 45788888764433333
No 119
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.38 E-value=0.89 Score=45.04 Aligned_cols=203 Identities=12% Similarity=0.096 Sum_probs=111.1
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC----ceec-cC-CCC
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN----QWQL-AS-PML 166 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~----~W~~-~~-~~~ 166 (373)
.+..++.....+..+.... ....+.++...++.||+.-.. ...++++++... .... +. .+.
T Consensus 405 ~Ir~i~l~~~~~~~l~~~~------~~~~gl~~d~~~~~lY~sD~~-------~~~I~~~~l~g~~~~~~~~~vi~~~l~ 471 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPNL------RNVVALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDIQ 471 (791)
T ss_dssp SEEEECTTSCCCEEEECSC------SSEEEEEEETTTTEEEEEETT-------TTEEEEEEC--------CEEEECSSCS
T ss_pred ceeEeeccCCcceeeecCC------CceEEEeecccCCeeEEeecc-------ceeEEEEeccCCCCCcceeEEEecCCC
Confidence 4566676666665543211 133555555557899998542 346888887652 2222 22 121
Q ss_pred CcceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc--CCccccccccEEEE--CCEEEEEeCccCCC
Q 017349 167 TPRSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAA--KLRMGLARYDSAVM--GSKMYVTEGWTWPF 240 (373)
Q Consensus 167 ~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~--~~~lyv~gG~~~~~ 240 (373)
. ..++++ .+++||+.-.. ...++++++....-+.+. .+..| .+.++. ++.||+.--.
T Consensus 472 ~---P~GLAvD~~~~~LY~tD~~-------~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g---- 534 (791)
T 3m0c_C 472 A---PDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG---- 534 (791)
T ss_dssp C---CCEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----
T ss_pred C---cceeeeeecCCcEEEEecC-------CCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecCC----
Confidence 1 223444 46799997543 347899998876554442 22222 123342 5889987421
Q ss_pred ccCCceEEEeCCCCceeecccCccCCcc-eEEEE-ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEE
Q 017349 241 MFSPRGGVYDINKDTWNLMSDGMKEGWT-GISIV-LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAV 318 (373)
Q Consensus 241 ~~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~-~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 318 (373)
....|+++++....-+.+.. ....+- +.++- .+++||+.... ...|+++|++...-..+.... ......+++
T Consensus 535 -~~~~I~~~~~dG~~~~~lv~-~~l~~P~GLavD~~~~~LYwaD~~-~~~I~~~d~dG~~~~~v~~~~---~~l~~P~gl 608 (791)
T 3m0c_C 535 -TPAKIKKGGLNGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDE---KRLAHPFSL 608 (791)
T ss_dssp -SSCEEEEEETTSCCEEEEEC-SSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEEECT---TTTSSEEEE
T ss_pred -CCCeEEEEecCCCceEEEEe-CCCCCceEEEEecCCCeEEEEeCC-CCcEEEEecCCCceEEEecCC---CccCCCCEE
Confidence 11578999886544333221 111111 12222 37899998643 668999999765444443211 111345788
Q ss_pred EEeCCEEEEEeCC
Q 017349 319 NGVEGKIYVVSSG 331 (373)
Q Consensus 319 ~~~~~~l~i~GG~ 331 (373)
+..+++||+.--.
T Consensus 609 av~~~~lYwtD~~ 621 (791)
T 3m0c_C 609 AVFEDKVFWTDII 621 (791)
T ss_dssp EEETTEEEEEETT
T ss_pred EEeCCEEEEEECC
Confidence 8889999998753
No 120
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.36 E-value=0.5 Score=45.60 Aligned_cols=194 Identities=11% Similarity=-0.035 Sum_probs=105.2
Q ss_pred ceeEEEeeCCC------CCeeeCC-CCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCC-CCcceeEEEeCC-CCc---
Q 017349 91 RIQWQALDPRS------GRWFVLP-PMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTE-TPMQSTIMYRAT-TNQ--- 158 (373)
Q Consensus 91 ~~~~~~~d~~~------~~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~-~~~~~~~~yd~~-t~~--- 158 (373)
..+++.+|..+ .....+. .-. .......++.+++.+++........ -....++++|.. +++
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~ 232 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAH-------RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFAD 232 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCS-------SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCC-------CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccc
Confidence 35788899887 5555553 211 1112223344665444443321110 123589999998 563
Q ss_pred eeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccc-------cccEEEE-CCE
Q 017349 159 WQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLA-------RYDSAVM-GSK 229 (373)
Q Consensus 159 W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~-------~~~~~~~-~~~ 229 (373)
.+.+..-. ......... -++++|+.+..+ + ...++.+|+.+++++.+........ ....+.. +++
T Consensus 233 ~~~l~~~~-~~~~~~~~~spdg~l~~~~~~~--~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 233 TRTLLGGP-EEAIAQAEWAPDGSLIVATDRT--G---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp EEEEEEET-TBCEEEEEECTTSCEEEEECTT--S---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC
T ss_pred cEEeCCCC-CceEcceEECCCCeEEEEECCC--C---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE
Confidence 33332211 111222222 267777766543 1 3479999998999988754322211 1123333 677
Q ss_pred EEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEE-EEECCeEEEEeeCC--CcceEEEeCCCCceeeecC
Q 017349 230 MYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGIS-IVLEGKLFVISEHG--DCPMKQYNPDDDTWRYVGG 304 (373)
Q Consensus 230 lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~l~v~gg~~--~~~~~~yd~~~~~W~~~~~ 304 (373)
+++.+.. ....++.+|..++..+.+... ....... ..-++.++++.+.. ...++.+|..+++.+.+..
T Consensus 307 ~~~~~~~-----~~~~l~~~d~~~~~~~~l~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~ 377 (662)
T 3azo_A 307 IAVVHGK-----GAAVLGILDPESGELVDAAGP--WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGA 377 (662)
T ss_dssp EEEEEBS-----SSCEEEEEETTTTEEEECCSS--CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEES
T ss_pred EEEEEEc-----CccEEEEEECCCCcEEEecCC--CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeec
Confidence 7766643 235788889988887766532 2222222 33466666665432 3478888998888777743
No 121
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.32 E-value=0.49 Score=41.40 Aligned_cols=176 Identities=12% Similarity=0.189 Sum_probs=88.0
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCce--eccCCCCCcc-
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQW--QLASPMLTPR- 169 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W--~~~~~~~~~r- 169 (373)
.+.++|..+..-...-+.. . ....+.....++..++.||.+ ..+.+||..+..- +....+....
T Consensus 78 ~v~iWd~~~~~~~~~~~~~--~----~~v~~~~~s~~~~~l~s~~~d-------~~v~iw~~~~~~~~~~~~~~~~~h~~ 144 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLR--S----SWVMTCAYAPSGNYVACGGLD-------NICSIYNLKTREGNVRVSRELAGHTG 144 (340)
T ss_dssp EEEEEETTTCCEEEEEECS--S----SCEEEEEECTTSSEEEEEETT-------CEEEEEETTTCSBSCEEEEEEECCSS
T ss_pred cEEEEECCCCCcceEeecC--C----ccEEEEEECCCCCEEEEEeCC-------CeEEEEECccCCCcceeEEEecCCCc
Confidence 4777887766533221111 1 223333444467777777752 2688888876531 1111111111
Q ss_pred eeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCce
Q 017349 170 SFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRG 246 (373)
Q Consensus 170 ~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i 246 (373)
....+.. -+++ ++.|+.+ ..+.+||..+++-... +.........+.+ ++.+++.|+.+ ..+
T Consensus 145 ~v~~~~~~~~~~-l~s~s~d-------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d------~~v 208 (340)
T 1got_B 145 YLSCCRFLDDNQ-IVTSSGD-------TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD------ASA 208 (340)
T ss_dssp CEEEEEEEETTE-EEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SCE
T ss_pred cEEEEEECCCCc-EEEEECC-------CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC------CcE
Confidence 1111222 2455 4444443 3588999988764322 1111111112222 66777778766 578
Q ss_pred EEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 247 GVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 247 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
..||..++.-...-..........+..-++++++.|+. ...+..||..+++
T Consensus 209 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-d~~v~iwd~~~~~ 259 (340)
T 1got_B 209 KLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD-DATCRLFDLRADQ 259 (340)
T ss_dssp EEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEETTTTE
T ss_pred EEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC-CCcEEEEECCCCc
Confidence 99999876532211101111111112226777777765 5689999987764
No 122
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.31 E-value=0.13 Score=44.87 Aligned_cols=156 Identities=13% Similarity=0.072 Sum_probs=83.0
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
.++.||+.+.. ...+++||+.+++.+.+.... .....+++. -++++|+..... ......+.+||+.++
T Consensus 54 ~~g~l~~~~~~-------~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~---~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 54 RQGQLFLLDVF-------EGNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGD---FKSTGGIFAATENGD 122 (333)
T ss_dssp TTSCEEEEETT-------TCEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTT---SSSCCEEEEECTTSC
T ss_pred CCCCEEEEECC-------CCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCC---CCCCceEEEEeCCCC
Confidence 47788887653 237999999998876543211 122233333 267788765331 112246899999888
Q ss_pred eEEec-cCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCe-EEEEee
Q 017349 207 TWTTA-AKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGK-LFVISE 283 (373)
Q Consensus 207 ~W~~~-~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-l~v~gg 283 (373)
..+.+ ........-...+.. +|++|+.............++++|+.+++...+...... ..+.+..-+++ ||+...
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISV-ANGIALSTDEKVLWVTET 201 (333)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESS-EEEEEECTTSSEEEEEEG
T ss_pred EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCc-ccceEECCCCCEEEEEeC
Confidence 76532 221111111122222 678887654211112235789999987776554321111 11111122454 777653
Q ss_pred CCCcceEEEeCCC
Q 017349 284 HGDCPMKQYNPDD 296 (373)
Q Consensus 284 ~~~~~~~~yd~~~ 296 (373)
. ...+++||..+
T Consensus 202 ~-~~~i~~~d~~~ 213 (333)
T 2dg1_A 202 T-ANRLHRIALED 213 (333)
T ss_dssp G-GTEEEEEEECT
T ss_pred C-CCeEEEEEecC
Confidence 2 45889999854
No 123
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.39 Score=41.85 Aligned_cols=179 Identities=7% Similarity=0.115 Sum_probs=84.0
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC-----ceeccCCCCC
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN-----QWQLASPMLT 167 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~-----~W~~~~~~~~ 167 (373)
.+.+||..++.+..+..+.... ......+.....++.+++.|+.++ .+.+||.... .+..+..+..
T Consensus 35 ~i~lw~~~~~~~~~~~~~~~~~--h~~~v~~v~~sp~~~~las~s~D~-------~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 35 KIKLVSVKYDDFTLIDVLDETA--HKKAIRSVAWRPHTSLLAAGSFDS-------TVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp CEEEEECSSSCCEEEEEECTTC--CCSCEEEEEECTTSSEEEEEETTS-------CEEEEEC-------CCCEEEEEEC-
T ss_pred EEEEEEecCCCeEEEEEEecCC--ccCCEEEEEECCCCCEEEEEeCCC-------cEEEEEcccCcCccccceeEEEEcC
Confidence 3677888766544332221110 012233344444677777777521 5777776432 1222211211
Q ss_pred cce-eeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCC--CeEEeccCCccccccccEEEE--CCEEEEEeCccCCCc
Q 017349 168 PRS-FFASGNV-NGKIMAVGGTGANINETMTAVECYDPES--DTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFM 241 (373)
Q Consensus 168 ~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t--~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~ 241 (373)
... -..++.. +++.++.|+.+ ..+.+||... ..++.+..+.........+.. ++.+++.|+.+
T Consensus 106 h~~~V~~v~~sp~g~~las~s~D-------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D---- 174 (330)
T 2hes_X 106 HENEVKGVAWSNDGYYLATCSRD-------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD---- 174 (330)
T ss_dssp ---CEEEEEECTTSCEEEEEETT-------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT----
T ss_pred CCCcEEEEEECCCCCEEEEEeCC-------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC----
Confidence 111 1122222 46666667664 3578888743 234433322222111122222 56777777766
Q ss_pred cCCceEEEeCCCCceeecccCccCCcce-EEEEE--C--CeEEEEeeCCCcceEEEeCC
Q 017349 242 FSPRGGVYDINKDTWNLMSDGMKEGWTG-ISIVL--E--GKLFVISEHGDCPMKQYNPD 295 (373)
Q Consensus 242 ~~~~i~~yd~~~~~W~~~~~~~~~~~~~-~~~~~--~--~~l~v~gg~~~~~~~~yd~~ 295 (373)
..+.+||..++.|+.+.. +...... .++.+ + +..++.|+. ...+..||..
T Consensus 175 --~~i~iW~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~s~-D~~v~iw~~~ 229 (330)
T 2hes_X 175 --DTVRIWKDYDDDWECVAV-LNGHEGTVWSSDFDKTEGVFRLCSGSD-DSTVRVWKYM 229 (330)
T ss_dssp --SCEEEEEEETTEEEEEEE-ECCCSSCEEEEEECCSSSSCEEEEEET-TSCEEEEEEE
T ss_pred --CeEEEEECCCCCeeEEEE-ccCCCCcEEEEEecCCCCeeEEEEEeC-CCeEEEEEec
Confidence 578889988877765543 1111111 11222 2 344555554 4567777664
No 124
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.28 E-value=0.16 Score=44.09 Aligned_cols=194 Identities=13% Similarity=0.237 Sum_probs=93.2
Q ss_pred CEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee-eeeeEe-C--CeEEEEcCCCCCCCCcCceEEEEeCCC
Q 017349 130 GKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF-FASGNV-N--GKIMAVGGTGANINETMTAVECYDPES 205 (373)
Q Consensus 130 ~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~-~~~~~~-~--~~iyv~GG~~~~~~~~~~~~~~yd~~t 205 (373)
+.+++.|+.+ ..+.+||..++.|..+..+...... .+++.. + +.+++.|+.+ ..+.++|..+
T Consensus 71 ~~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-------~~i~lwd~~~ 136 (316)
T 3bg1_A 71 GNILASCSYD-------RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-------GAISLLTYTG 136 (316)
T ss_dssp SSCEEEEETT-------SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-------SCEEEEEECS
T ss_pred CCEEEEEECC-------CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-------CCEEEEecCC
Confidence 5677777652 2688999988777554333211111 122222 2 5566777665 3477788776
Q ss_pred C-eEEeccCCccccccccEEEE-------------------CCEEEEEeCccCCCccCCceEEEeCCC-CceeecccCcc
Q 017349 206 D-TWTTAAKLRMGLARYDSAVM-------------------GSKMYVTEGWTWPFMFSPRGGVYDINK-DTWNLMSDGMK 264 (373)
Q Consensus 206 ~-~W~~~~~~~~~~~~~~~~~~-------------------~~~lyv~gG~~~~~~~~~~i~~yd~~~-~~W~~~~~~~~ 264 (373)
. .|.....+.........+.. .+++++.|+.+ ..+.+||..+ +.|..+.. +.
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~~~~~~~~~-l~ 209 (316)
T 3bg1_A 137 EGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD------NLIKLWKEEEDGQWKEEQK-LE 209 (316)
T ss_dssp SSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTT------SBCCEEEECTTSCEEEEEC-CB
T ss_pred CCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCC------CeEEEEEeCCCCccceeee-cc
Confidence 5 46543222211111111111 13456666655 5677888864 45655433 21
Q ss_pred CCcceE-EEEE--C----CeEEEEeeCCCcceEEEeCCC---Cceee--ecCCCCCCcccccceEE-EEeCCEEEEEeCC
Q 017349 265 EGWTGI-SIVL--E----GKLFVISEHGDCPMKQYNPDD---DTWRY--VGGDKFPCEVMHRPFAV-NGVEGKIYVVSSG 331 (373)
Q Consensus 265 ~~~~~~-~~~~--~----~~l~v~gg~~~~~~~~yd~~~---~~W~~--~~~~~~~~~~~~~~~~~-~~~~~~l~i~GG~ 331 (373)
...... ++.+ + +++++.|+. ...+..||..+ +.|.. +.. .. ..-.++ ...++++++.||.
T Consensus 210 ~h~~~V~~v~~sp~~~~~~~~las~s~-D~~v~iw~~~~~~~~~~~~~~~~~--~~----~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 210 AHSDWVRDVAWAPSIGLPTSTIASCSQ-DGRVFIWTCDDASSNTWSPKLLHK--FN----DVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp CCSSCEEEEECCCCSSCSCCEEEEEET-TCEEEEEECSSTTCCCCBCCEEEE--CS----SCEEEEEECTTTCCEEEEES
T ss_pred cCCCceEEEEecCCCCCCCceEEEEcC-CCeEEEEEccCccccchhhhhhhc--CC----CcEEEEEEcCCCCEEEEEcC
Confidence 111111 1222 2 256666664 56788888765 33431 211 11 111222 2345777777764
Q ss_pred ceeeeeEEEEeecCCcccceEEecC
Q 017349 332 LNVAIGRVYEEQNGGISAEWKVMTA 356 (373)
Q Consensus 332 ~~~~~~~~~~~~~d~~~~~W~~~~~ 356 (373)
. ....+++ .+. ...|..+..
T Consensus 283 D--~~v~lw~--~~~-~g~~~~~~~ 302 (316)
T 3bg1_A 283 D--NKVTLWK--ESV-DGQWVCISD 302 (316)
T ss_dssp S--SCEEEEE--ECT-TSCEEEEEE
T ss_pred C--CeEEEEE--ECC-CCcEEEeee
Confidence 2 2233444 332 246876644
No 125
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.28 E-value=0.094 Score=46.55 Aligned_cols=187 Identities=7% Similarity=0.020 Sum_probs=83.9
Q ss_pred eEEEeeCCCCC-eeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCc-eeccCCCCC--c
Q 017349 93 QWQALDPRSGR-WFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQ-WQLASPMLT--P 168 (373)
Q Consensus 93 ~~~~~d~~~~~-W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~--~ 168 (373)
.+.+||..+.. |.....+... .....+.....++..++.|+.+ ..+.+||..+++ |.....+.. .
T Consensus 78 ~v~vwd~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~h~ 146 (377)
T 3dwl_C 78 NAYVYEKRPDGTWKQTLVLLRL----NRAATFVRWSPNEDKFAVGSGA-------RVISVCYFEQENDWWVSKHLKRPLR 146 (377)
T ss_dssp SEEEC------CCCCEEECCCC----SSCEEEEECCTTSSCCEEEESS-------SCEEECCC-----CCCCEEECSSCC
T ss_pred eEEEEEcCCCCceeeeeEeccc----CCceEEEEECCCCCEEEEEecC-------CeEEEEEECCcccceeeeEeecccC
Confidence 47778887766 4333222211 1223334444466667776652 257888887764 433333322 1
Q ss_pred ceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEE----------------eccCCccccccccEEEE--CCE
Q 017349 169 RSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWT----------------TAAKLRMGLARYDSAVM--GSK 229 (373)
Q Consensus 169 r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~----------------~~~~~~~~~~~~~~~~~--~~~ 229 (373)
..-..++.. ++++++.|+.+ ..+.+||..+.... .+..+ ........+.+ +++
T Consensus 147 ~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~ 218 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGCAD-------RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGN 218 (377)
T ss_dssp SCEEEEEECTTSSEEEEEESS-------SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSS
T ss_pred CCeEEEEEcCCCCEEEEEeCC-------CEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCC
Confidence 112222222 56677777664 34778887543311 11122 11111112222 667
Q ss_pred EEEEeCccCCCccCCceEEEeCCCCce--eeccc--CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeecCC
Q 017349 230 MYVTEGWTWPFMFSPRGGVYDINKDTW--NLMSD--GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVGGD 305 (373)
Q Consensus 230 lyv~gG~~~~~~~~~~i~~yd~~~~~W--~~~~~--~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~ 305 (373)
+++.|+.+ ..+.+||..++.- ..+.. .........+..-++++++.|+. ..+.+|+.....|.....+
T Consensus 219 ~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (377)
T 3dwl_C 219 ALAYAGHD------SSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYN--YSPILLQGNESGWAHTRDL 290 (377)
T ss_dssp CEEEEETT------TEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESS--SSEEEECCCC---CCSBCC
T ss_pred EEEEEeCC------CcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcC--CcEEEEEeCCCceEEEeee
Confidence 66667655 4688888877653 11111 11111222223457887777654 3666888877777766654
Q ss_pred C
Q 017349 306 K 306 (373)
Q Consensus 306 ~ 306 (373)
.
T Consensus 291 ~ 291 (377)
T 3dwl_C 291 D 291 (377)
T ss_dssp C
T ss_pred c
Confidence 4
No 126
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.27 E-value=0.52 Score=41.21 Aligned_cols=151 Identities=15% Similarity=0.201 Sum_probs=75.7
Q ss_pred eccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCC
Q 017349 126 LPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPE 204 (373)
Q Consensus 126 ~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~ 204 (373)
...++.+++.|+.+ ..+.+||..+..-...-+.... ....++. -+++.++.||.+ ..+.+||..
T Consensus 63 ~s~d~~~l~s~s~D-------g~v~iWd~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d-------~~v~iw~~~ 127 (340)
T 1got_B 63 WGTDSRLLLSASQD-------GKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNYVACGGLD-------NICSIYNLK 127 (340)
T ss_dssp ECTTSSEEEEEETT-------TEEEEEETTTCCEEEEEECSSS-CEEEEEECTTSSEEEEEETT-------CEEEEEETT
T ss_pred ECCCCCEEEEEeCC-------CcEEEEECCCCCcceEeecCCc-cEEEEEECCCCCEEEEEeCC-------CeEEEEECc
Confidence 33466677777652 2688889877653221111111 1112222 256667777765 457888887
Q ss_pred CCe--EEeccCCccccccc-cEE-EECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEE
Q 017349 205 SDT--WTTAAKLRMGLARY-DSA-VMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFV 280 (373)
Q Consensus 205 t~~--W~~~~~~~~~~~~~-~~~-~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v 280 (373)
+.. .+....+....... .+. .-++.+ +.|+.+ ..+..||+.+++-...-..........+..-++++++
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l-~s~s~d------~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 200 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDDNQI-VTSSGD------TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFV 200 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEETTEE-EEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred cCCCcceeEEEecCCCccEEEEEECCCCcE-EEEECC------CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEE
Confidence 653 12111111111111 112 225554 445444 5789999988764322111111111111222567777
Q ss_pred EeeCCCcceEEEeCCCCce
Q 017349 281 ISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 281 ~gg~~~~~~~~yd~~~~~W 299 (373)
.|+. ...+..||..+..-
T Consensus 201 sg~~-d~~v~~wd~~~~~~ 218 (340)
T 1got_B 201 SGAC-DASAKLWDVREGMC 218 (340)
T ss_dssp EEET-TSCEEEEETTTCSE
T ss_pred EEeC-CCcEEEEECCCCee
Confidence 7765 66899999877643
No 127
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.26 E-value=0.25 Score=48.87 Aligned_cols=150 Identities=8% Similarity=0.014 Sum_probs=76.7
Q ss_pred EEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEe
Q 017349 124 TSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYD 202 (373)
Q Consensus 124 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd 202 (373)
..+..++..+++|+.+ ..+.+||..+++....-...... -..+.. -+++.++.|+.+ ..+.+||
T Consensus 19 i~~sp~~~~la~~~~~-------g~v~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~d-------g~i~vw~ 83 (814)
T 3mkq_A 19 IDFHPTEPWVLTTLYS-------GRVEIWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDD-------FRIRVFN 83 (814)
T ss_dssp EEECSSSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETT-------SEEEEEE
T ss_pred EEECCCCCEEEEEeCC-------CEEEEEECCCCceEEEEecCCCc-EEEEEEeCCCCEEEEEeCC-------CeEEEEE
Confidence 3344456666666542 26889998877543221111111 112222 255666666654 4689999
Q ss_pred CCCCeEEeccCCccccccc-cEEEE-CCEEEEEeCccCCCccCCceEEEeCCCC-ceeecccCccCCcceEEEEE--CCe
Q 017349 203 PESDTWTTAAKLRMGLARY-DSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKD-TWNLMSDGMKEGWTGISIVL--EGK 277 (373)
Q Consensus 203 ~~t~~W~~~~~~~~~~~~~-~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~~~~~~~~--~~~ 277 (373)
..+++.... +....... ..+.. ++..++.|+.+ ..+.+||..++ .....-... .......+.. ++.
T Consensus 84 ~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 84 YNTGEKVVD--FEAHPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQTFEGH-EHFVMCVAFNPKDPS 154 (814)
T ss_dssp TTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEEEECC-SSCEEEEEEETTEEE
T ss_pred CCCCcEEEE--EecCCCCEEEEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEEEcCC-CCcEEEEEEEcCCCC
Confidence 988765332 11111111 12222 56566666654 57889998776 222211111 1111111222 456
Q ss_pred EEEEeeCCCcceEEEeCCCCc
Q 017349 278 LFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 278 l~v~gg~~~~~~~~yd~~~~~ 298 (373)
+++.|+. ...+..||..+..
T Consensus 155 ~l~~~~~-dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 155 TFASGCL-DRTVKVWSLGQST 174 (814)
T ss_dssp EEEEEET-TSEEEEEETTCSS
T ss_pred EEEEEeC-CCeEEEEECCCCc
Confidence 6666665 5689999986553
No 128
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.25 E-value=0.47 Score=40.44 Aligned_cols=157 Identities=11% Similarity=0.064 Sum_probs=83.1
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEE
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
.+....++.+|+++.. ...+++||+.++ .+.... +. ....+++. -++++|+.... ...+.+|
T Consensus 33 ~~~d~~g~~l~~~~~~-------~~~i~~~~~~~~-~~~~~~-~~-~~~~~l~~~~dg~l~v~~~~-------~~~i~~~ 95 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVR-------QNRTWAWSDDGQ-LSPEMH-PS-HHQNGHCLNKQGHLIACSHG-------LRRLERQ 95 (296)
T ss_dssp EEEEGGGTEEEEEEGG-------GTEEEEEETTSC-EEEEES-SC-SSEEEEEECTTCCEEEEETT-------TTEEEEE
T ss_pred CeEeCCCCEEEEEeCC-------CCEEEEEECCCC-eEEEEC-CC-CCcceeeECCCCcEEEEecC-------CCeEEEE
Confidence 3333324458887654 237999999988 544432 11 11223333 36778876532 1468999
Q ss_pred eCCCCeEEeccCCccc-c-cc-ccEEE-ECCEEEEE----eCcc------C-CCccCCceEEEeCCCCceeecccCccCC
Q 017349 202 DPESDTWTTAAKLRMG-L-AR-YDSAV-MGSKMYVT----EGWT------W-PFMFSPRGGVYDINKDTWNLMSDGMKEG 266 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~-~-~~-~~~~~-~~~~lyv~----gG~~------~-~~~~~~~i~~yd~~~~~W~~~~~~~~~~ 266 (373)
|+.+++.+.+...... . .. ...++ -+|++|+. |... . .......++.||+. ++.+.+......
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~- 173 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK- 173 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS-
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC-
Confidence 9988887765322111 1 11 12222 37889886 3210 0 01112478899987 555544321111
Q ss_pred cceEEEEECCeEEEEeeCCCcceEEEeCC-CCce
Q 017349 267 WTGISIVLEGKLFVISEHGDCPMKQYNPD-DDTW 299 (373)
Q Consensus 267 ~~~~~~~~~~~l~v~gg~~~~~~~~yd~~-~~~W 299 (373)
-.+.+..-+++++ +.......+++||+. +++.
T Consensus 174 ~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 174 PNGLAFLPSGNLL-VSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp EEEEEECTTSCEE-EEETTTTEEEEEEECSSSCE
T ss_pred CccEEECCCCCEE-EEeCCCCeEEEEEECCCCcC
Confidence 1111122367777 545446789999986 4555
No 129
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.24 E-value=0.25 Score=44.72 Aligned_cols=153 Identities=10% Similarity=0.090 Sum_probs=80.5
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEE
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
+..+..++.+++.|+.++ .+.+||..+++-...-.... ..-..++. -++++++.|+.+ ..+.+|
T Consensus 113 ~~~~~p~~~~l~s~s~Dg-------~i~vwd~~~~~~~~~l~~h~-~~V~~v~~~~~~~~l~sgs~D-------~~i~iw 177 (410)
T 1vyh_C 113 RVIFHPVFSVMVSASEDA-------TIKVWDYETGDFERTLKGHT-DSVQDISFDHSGKLLASCSAD-------MTIKLW 177 (410)
T ss_dssp EEEECSSSSEEEEEESSS-------CEEEEETTTCCCCEEECCCS-SCEEEEEECTTSSEEEEEETT-------SCCCEE
T ss_pred EEEEcCCCCEEEEEeCCC-------eEEEEECCCCcEEEEEeccC-CcEEEEEEcCCCCEEEEEeCC-------CeEEEE
Confidence 344444667777777522 68899988875432211111 11112222 256777777765 346778
Q ss_pred eCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEE-EEECCeE
Q 017349 202 DPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGIS-IVLEGKL 278 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~l 278 (373)
|..+.+-. ..+......-.++.+ ++..++.|+.+ ..+..||..++.-...-... ....... ..-++++
T Consensus 178 d~~~~~~~--~~~~~h~~~V~~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~g~~ 248 (410)
T 1vyh_C 178 DFQGFECI--RTMHGHDHNVSSVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKTFTGH-REWVRMVRPNQDGTL 248 (410)
T ss_dssp ETTSSCEE--ECCCCCSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEEECC-SSCEEEEEECTTSSE
T ss_pred eCCCCcee--EEEcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEeCC-CccEEEEEECCCCCE
Confidence 88765432 222221111122222 56667777766 57899999887532211101 1111111 1225677
Q ss_pred EEEeeCCCcceEEEeCCCCcee
Q 017349 279 FVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 279 ~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
++.|+. ...+..||..+....
T Consensus 249 l~s~s~-D~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 249 IASCSN-DQTVRVWVVATKECK 269 (410)
T ss_dssp EEEEET-TSCEEEEETTTCCEE
T ss_pred EEEEcC-CCeEEEEECCCCcee
Confidence 777765 568888998776543
No 130
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.24 E-value=0.44 Score=40.04 Aligned_cols=207 Identities=10% Similarity=-0.025 Sum_probs=108.4
Q ss_pred eEEEeeCCCCCeeeCCC---CCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcc
Q 017349 93 QWQALDPRSGRWFVLPP---MPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPR 169 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r 169 (373)
.++++|........+.. +..+. ..-++.+....++.||+.... ...++++|+..+.-..+..... .
T Consensus 11 ~I~~~~~~g~~~~~~~~~~~~~~~~---~~~~gi~~d~~~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~~~~~-~ 79 (267)
T 1npe_A 11 KIERLPLERNTMKKTEAKAFLHIPA---KVIIGLAFDCVDKVVYWTDIS-------EPSIGRASLHGGEPTTIIRQDL-G 79 (267)
T ss_dssp EEEEEEESSSCBCGGGCEEEEEEEE---EEEEEEEEETTTTEEEEEETT-------TTEEEEEESSSCCCEEEECTTC-C
T ss_pred eEEEEEecCcccccccceeeecCCC---CcEEEEEEecCCCEEEEEECC-------CCEEEEEecCCCCcEEEEECCC-C
Confidence 57778776654322111 11000 122455554447899988532 3479999998764333211111 1
Q ss_pred eeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCc
Q 017349 170 SFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPR 245 (373)
Q Consensus 170 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~ 245 (373)
..+.++.. +++||+.... ...+.++++....-+.+...... .....++. ++.||+..... ....
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~g~~~~~~~~~~~~-~P~~i~vd~~~g~lyv~~~~~----~~~~ 147 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQ-------LDRIEVAKMDGTQRRVLFDTGLV-NPRGIVTDPVRGNLYWTDWNR----DNPK 147 (267)
T ss_dssp CEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCS-SEEEEEEETTTTEEEEEECCS----SSCE
T ss_pred CccEEEEEecCCeEEEEECC-------CCEEEEEEcCCCCEEEEEECCCC-CccEEEEeeCCCEEEEEECCC----CCcE
Confidence 22344443 5789987543 24688898875443333211111 11223333 68899875321 1257
Q ss_pred eEEEeCCCCceeecccCccCCcceEEEEE---CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEeC
Q 017349 246 GGVYDINKDTWNLMSDGMKEGWTGISIVL---EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVE 322 (373)
Q Consensus 246 i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 322 (373)
++++++....-+.+.. .... ......+ +++||+.... ...+.++|++...-..+.. .. ....+++..+
T Consensus 148 I~~~~~dg~~~~~~~~-~~~~-~P~gia~d~~~~~lyv~d~~-~~~I~~~~~~g~~~~~~~~--~~----~~P~gi~~d~ 218 (267)
T 1npe_A 148 IETSHMDGTNRRILAQ-DNLG-LPNGLTFDAFSSQLCWVDAG-THRAECLNPAQPGRRKVLE--GL----QYPFAVTSYG 218 (267)
T ss_dssp EEEEETTSCCCEEEEC-TTCS-CEEEEEEETTTTEEEEEETT-TTEEEEEETTEEEEEEEEE--CC----CSEEEEEEET
T ss_pred EEEEecCCCCcEEEEE-CCCC-CCcEEEEcCCCCEEEEEECC-CCEEEEEecCCCceEEEec--CC----CCceEEEEeC
Confidence 8888886543332221 1111 1122222 5789988643 5689999997643332221 11 2336677778
Q ss_pred CEEEEEeCC
Q 017349 323 GKIYVVSSG 331 (373)
Q Consensus 323 ~~l~i~GG~ 331 (373)
+.||+....
T Consensus 219 ~~lyva~~~ 227 (267)
T 1npe_A 219 KNLYYTDWK 227 (267)
T ss_dssp TEEEEEETT
T ss_pred CEEEEEECC
Confidence 999998653
No 131
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.22 E-value=0.13 Score=45.41 Aligned_cols=177 Identities=8% Similarity=0.204 Sum_probs=90.5
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee-
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF- 171 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~- 171 (373)
.+.++|..++.|.....+.... .....+.....++..++.|+.++ .+.+||..++.+..+..+......
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~~h---~~~v~~~~~sp~g~~l~s~s~D~-------~v~iw~~~~~~~~~~~~~~~h~~~v 108 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSEGH---QRTVRKVAWSPCGNYLASASFDA-------TTCIWKKNQDDFECVTTLEGHENEV 108 (345)
T ss_dssp CEEEEEEETTEEEEEEEECSSC---SSCEEEEEECTTSSEEEEEETTS-------CEEEEEECCC-EEEEEEECCCSSCE
T ss_pred eEEEEEcCCCcceeeeeecccc---CCcEEEEEECCCCCEEEEEECCC-------cEEEEEccCCCeEEEEEccCCCCCc
Confidence 3667887777664322221010 12233444444677777777532 577788777765444333211111
Q ss_pred eeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCe-EEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceE
Q 017349 172 FASGNV-NGKIMAVGGTGANINETMTAVECYDPESDT-WTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGG 247 (373)
Q Consensus 172 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~ 247 (373)
.+++.. ++++++.|+.+ ..+.+||..+.. ++.+..+.........+.. ++.+++.|+.+ ..+.
T Consensus 109 ~~v~~sp~~~~l~s~s~D-------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d------~~i~ 175 (345)
T 3fm0_A 109 KSVAWAPSGNLLATCSRD-------KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYD------DTVK 175 (345)
T ss_dssp EEEEECTTSSEEEEEETT-------SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETT------SCEE
T ss_pred eEEEEeCCCCEEEEEECC-------CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCC------CcEE
Confidence 222222 56677777765 357888876643 3333222221111112222 56677777766 5788
Q ss_pred EEeCCCCceeecccCccCCcce-EEEEE--CCeEEEEeeCCCcceEEEeC
Q 017349 248 VYDINKDTWNLMSDGMKEGWTG-ISIVL--EGKLFVISEHGDCPMKQYNP 294 (373)
Q Consensus 248 ~yd~~~~~W~~~~~~~~~~~~~-~~~~~--~~~l~v~gg~~~~~~~~yd~ 294 (373)
.||..++.|..... ....... .++.+ +++.++.|+. ...+.+||.
T Consensus 176 ~w~~~~~~~~~~~~-~~~h~~~v~~l~~sp~g~~l~s~s~-D~~v~iW~~ 223 (345)
T 3fm0_A 176 LYREEEDDWVCCAT-LEGHESTVWSLAFDPSGQRLASCSD-DRTVRIWRQ 223 (345)
T ss_dssp EEEEETTEEEEEEE-ECCCSSCEEEEEECTTSSEEEEEET-TSCEEEEEE
T ss_pred EEEecCCCEEEEEE-ecCCCCceEEEEECCCCCEEEEEeC-CCeEEEecc
Confidence 99998888865432 1111111 11222 5667777665 456666663
No 132
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.22 E-value=0.62 Score=41.54 Aligned_cols=156 Identities=13% Similarity=0.076 Sum_probs=78.1
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEE
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVE 199 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~ 199 (373)
..+..+..++.+++.|+.+ ..+.+||........+... ...-..+... +++.++.++.+ ..+.
T Consensus 111 v~~~~~s~~~~~l~~~~~d-------g~i~i~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-------~~i~ 174 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVEN-------GELRLWNKTGALLNVLNFH--RAPIVSVKWNKDGTHIISMDVE-------NVTI 174 (425)
T ss_dssp EEEEEECTTSSEEEEEETT-------SCEEEEETTSCEEEEECCC--CSCEEEEEECTTSSEEEEEETT-------CCEE
T ss_pred eEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCeeeeccCC--CccEEEEEECCCCCEEEEEecC-------CeEE
Confidence 3444454567777777652 2588888433333333211 1111222222 45555566553 3588
Q ss_pred EEeCCCCeEEeccCCcccc--------------ccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccC
Q 017349 200 CYDPESDTWTTAAKLRMGL--------------ARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKE 265 (373)
Q Consensus 200 ~yd~~t~~W~~~~~~~~~~--------------~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~ 265 (373)
+||..+++-...-..+... .........+..+++|+.+ ..+.+||..+++-...-.....
T Consensus 175 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------g~i~~~d~~~~~~~~~~~~~~~ 248 (425)
T 1r5m_A 175 LWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK------GAIFVYQITEKTPTGKLIGHHG 248 (425)
T ss_dssp EEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG------GCEEEEETTCSSCSEEECCCSS
T ss_pred EEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC------CeEEEEEcCCCceeeeeccCCC
Confidence 8998887643322111111 0222333333445666655 5799999987643221111111
Q ss_pred CcceEEEEECCeEEEEeeCCCcceEEEeCCCCce
Q 017349 266 GWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 266 ~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W 299 (373)
.....+..-++++++.++. ...+..||..+.+-
T Consensus 249 ~i~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~ 281 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASD-DGTLRIWHGGNGNS 281 (425)
T ss_dssp CEEEEEEETTTTEEEEEET-TSCEEEECSSSBSC
T ss_pred ceEEEEECCCCCEEEEEcC-CCEEEEEECCCCcc
Confidence 1112222236666666664 56899999876543
No 133
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.21 E-value=0.77 Score=44.64 Aligned_cols=150 Identities=10% Similarity=-0.013 Sum_probs=78.1
Q ss_pred cceeEEEeCCCCceeccCCCCCc-ceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCC-eEEeccCCcccc----
Q 017349 146 MQSTIMYRATTNQWQLASPMLTP-RSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESD-TWTTAAKLRMGL---- 218 (373)
Q Consensus 146 ~~~~~~yd~~t~~W~~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~---- 218 (373)
...++++|..+++-..+...... .....+.. -+++.++++..+ .......+.++|..++ ..+.+.......
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN--RAQNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC--TTSCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC--CCCCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 45799999998876554422111 22122222 255544444333 2334467999999998 666553211111
Q ss_pred ccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CC-eEEEEeeCC---CcceE
Q 017349 219 ARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EG-KLFVISEHG---DCPMK 290 (373)
Q Consensus 219 ~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~l~v~gg~~---~~~~~ 290 (373)
.......- +|++++.+..+ ....++.+|...+..+.+... ... ....+.+ ++ .||+.+..+ ...++
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~----g~~~l~~~~~~~~~~~~l~~~-~~~-v~~~~~~spdg~~l~~~~~~~~~~~~~l~ 385 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRD----GWNHLYLYDTTGRLIRQVTKG-EWE-VTNFAGFDPKGTRLYFESTEASPLERHFY 385 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTT----SSCEEEEEETTSCEEEECCCS-SSC-EEEEEEECTTSSEEEEEESSSCTTCBEEE
T ss_pred cCCceeecCCCCEEEEEEccC----CccEEEEEECCCCEEEecCCC-CeE-EEeeeEEcCCCCEEEEEecCCCCceEEEE
Confidence 01112233 77866655443 125678888766666665431 111 1111222 34 466555432 24788
Q ss_pred EEeCCCCceeeec
Q 017349 291 QYNPDDDTWRYVG 303 (373)
Q Consensus 291 ~yd~~~~~W~~~~ 303 (373)
.+|.++++.+.+.
T Consensus 386 ~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 386 CIDIKGGKTKDLT 398 (706)
T ss_dssp EEETTCCCCEESC
T ss_pred EEEcCCCCceecc
Confidence 8898887766554
No 134
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.20 E-value=0.65 Score=41.58 Aligned_cols=150 Identities=9% Similarity=0.039 Sum_probs=79.4
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceec-----cCCCCC-cceeeeeeEe-CC-eEEEEcCCCCCCCCcCceEEE
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQL-----ASPMLT-PRSFFASGNV-NG-KIMAVGGTGANINETMTAVEC 200 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~-----~~~~~~-~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~ 200 (373)
++.+++.|+.+ ..+.+||..++.... +..+.. ...-..+... ++ .+++.|+.+ ..+.+
T Consensus 93 ~~~~l~s~s~d-------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-------g~i~i 158 (402)
T 2aq5_A 93 NDNVIASGSED-------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-------NVILV 158 (402)
T ss_dssp CTTEEEEEETT-------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-------SCEEE
T ss_pred CCCEEEEEeCC-------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-------CEEEE
Confidence 56677777652 268899988875422 111111 1111122222 33 567777664 35889
Q ss_pred EeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecc-cCccCC-cceEEEEECC
Q 017349 201 YDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMS-DGMKEG-WTGISIVLEG 276 (373)
Q Consensus 201 yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~-~~~~~~-~~~~~~~~~~ 276 (373)
||..+++....-...........+.. ++.+++.|+.+ ..+.+||+.+++-...- ...... .......-++
T Consensus 159 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 159 WDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG 232 (402)
T ss_dssp EETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT
T ss_pred EECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC
Confidence 99998865332110111111112222 67777777665 57999999887643221 111111 1222223367
Q ss_pred eEEEEee--CCCcceEEEeCCCCc
Q 017349 277 KLFVISE--HGDCPMKQYNPDDDT 298 (373)
Q Consensus 277 ~l~v~gg--~~~~~~~~yd~~~~~ 298 (373)
++++.|. .....+.+||..+..
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCS
T ss_pred cEEEEeccCCCCceEEEEcCcccc
Confidence 7777762 236789999987643
No 135
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.20 E-value=1 Score=43.87 Aligned_cols=244 Identities=10% Similarity=0.020 Sum_probs=122.6
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT 155 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~ 155 (373)
.+.++|++..........+++.+.....|..+..................++.+++.+++..... + .....++++|..
T Consensus 78 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~-G-~~~~~i~v~dl~ 155 (695)
T 2bkl_A 78 RNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN-A-ADEAVLHVIDVD 155 (695)
T ss_dssp ETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET-T-CSCCEEEEEETT
T ss_pred ECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC-C-CceEEEEEEECC
Confidence 36778777655444455677888777777776443211000011234445555776665533211 1 123489999999
Q ss_pred CCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCC------CCcCceEEEEeCCCCeE--EeccCCccc-cccccEEE
Q 017349 156 TNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANI------NETMTAVECYDPESDTW--TTAAKLRMG-LARYDSAV 225 (373)
Q Consensus 156 t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~------~~~~~~~~~yd~~t~~W--~~~~~~~~~-~~~~~~~~ 225 (373)
+++......++.... ...+. -+++.++++..+... ......+++++..++.- +.+-..+.. ........
T Consensus 156 tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 156 SGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp TCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 998652112221111 12222 255555555443100 02345688888887753 222222211 11112222
Q ss_pred -ECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCC--CcceEEEeCCCCc---e
Q 017349 226 -MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHG--DCPMKQYNPDDDT---W 299 (373)
Q Consensus 226 -~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~--~~~~~~yd~~~~~---W 299 (373)
-+|+..++...... ....++.+|..++.|+.+..... ... ..+..+|.+|+....+ ...++++|.++.. |
T Consensus 235 SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~~-~~~-~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 235 SRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVKGVG-AKY-EVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASW 310 (695)
T ss_dssp CTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEECSS-CCE-EEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred CCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeecCCC-ceE-EEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCC
Confidence 25664444433211 23477888887778887754222 111 1233566666654422 4689999987654 8
Q ss_pred eeecCCCCCCcccccceEEEEeCCEEEEEeC
Q 017349 300 RYVGGDKFPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
+.+.. +.+ . ....++...+++|++...
T Consensus 311 ~~l~~-~~~-~--~~l~~~~~~~~~lv~~~~ 337 (695)
T 2bkl_A 311 KEIVP-EDS-S--ASLLSVSIVGGHLSLEYL 337 (695)
T ss_dssp EEEEC-CCS-S--CEEEEEEEETTEEEEEEE
T ss_pred eEEec-CCC-C--CeEEEEEEECCEEEEEEE
Confidence 87753 111 1 111233344788877764
No 136
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.19 E-value=0.34 Score=43.09 Aligned_cols=145 Identities=10% Similarity=0.076 Sum_probs=73.3
Q ss_pred EEEEEcCccCCCCCCcceeEEEeCCCCc------eeccCCCCCc---ceeeeeeEe-----CCeE-EEEcCCCCCCCCcC
Q 017349 131 KLFVLGGMRSDTETPMQSTIMYRATTNQ------WQLASPMLTP---RSFFASGNV-----NGKI-MAVGGTGANINETM 195 (373)
Q Consensus 131 ~i~v~GG~~~~~~~~~~~~~~yd~~t~~------W~~~~~~~~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~ 195 (373)
.+++.|+.+ ..+.+||..++. +..+...+.. ..-..+... ++.. ++.|+.+
T Consensus 82 ~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d------- 147 (397)
T 1sq9_A 82 CLVATTSFS-------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK------- 147 (397)
T ss_dssp EEEEEEETT-------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------
T ss_pred cEEEEEcCC-------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------
Confidence 777777652 258888887775 5555433211 222223333 4555 6666654
Q ss_pred ceEEEEeCCC------Ce---EEeccCCc-------cccc-cccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCcee
Q 017349 196 TAVECYDPES------DT---WTTAAKLR-------MGLA-RYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWN 257 (373)
Q Consensus 196 ~~~~~yd~~t------~~---W~~~~~~~-------~~~~-~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~ 257 (373)
..+.+||..+ .. |.....+. .... -..++.. ++ +++.|+.+ ..+.+||+.+++-.
T Consensus 148 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d------g~i~i~d~~~~~~~ 220 (397)
T 1sq9_A 148 GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN------GTVQISELSTLRPL 220 (397)
T ss_dssp SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT------SEEEEEETTTTEEE
T ss_pred CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC------CcEEEEECCCCcee
Confidence 3477787766 22 11110111 0111 1122222 56 66666655 57999999876533
Q ss_pred ecccCc--c---CCcceEEEEE--CCeEEEEeeCCC---cceEEEeCCCCc
Q 017349 258 LMSDGM--K---EGWTGISIVL--EGKLFVISEHGD---CPMKQYNPDDDT 298 (373)
Q Consensus 258 ~~~~~~--~---~~~~~~~~~~--~~~l~v~gg~~~---~~~~~yd~~~~~ 298 (373)
..-... . .... .++.+ ++++++.|+. . ..+..||..+.+
T Consensus 221 ~~~~~~~~h~~~~~~i-~~i~~~~~~~~l~~~~~-d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 221 YNFESQHSMINNSNSI-RSVKFSPQGSLLAIAHD-SNSFGCITLYETEFGE 269 (397)
T ss_dssp EEEECCC---CCCCCE-EEEEECSSTTEEEEEEE-ETTEEEEEEEETTTCC
T ss_pred EEEeccccccccCCcc-ceEEECCCCCEEEEEec-CCCCceEEEEECCCCc
Confidence 221110 0 1111 12222 5677777664 3 689999987664
No 137
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.18 E-value=0.38 Score=42.67 Aligned_cols=184 Identities=8% Similarity=0.020 Sum_probs=94.8
Q ss_pred EEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEecc-CCEEEEEcCccCCCCCCcceeEEEeCCCC
Q 017349 79 YLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPR-QGKLFVLGGMRSDTETPMQSTIMYRATTN 157 (373)
Q Consensus 79 ~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~t~ 157 (373)
.+++.|+.+ ..+.+||..+.+........... ....+..... ++.+++.|+.+ ..+.+||..++
T Consensus 87 ~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~h~----~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKG----GDIILWDYDVQNKTSFIQGMGPG----DAITGMKFNQFNTNQLFVSSIR-------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBT----SCEEEEETTSTTCEEEECCCSTT----CBEEEEEEETTEEEEEEEEETT-------TEEEEEETTSC
T ss_pred CEEEEEcCC----CeEEEEeCCCcccceeeecCCcC----CceeEEEeCCCCCCEEEEEeCC-------CEEEEEECCCC
Confidence 445555432 34778998877765543331011 2223333333 45677776542 26889998876
Q ss_pred ceeccCCCCCc-ceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCE-EEE
Q 017349 158 QWQLASPMLTP-RSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSK-MYV 232 (373)
Q Consensus 158 ~W~~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~-lyv 232 (373)
....+...... .....++. -++++++.|+.+ ..+.+||.....-..+.. .......+.+ ++. +++
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-------GRLLLLGLDGHEIFKEKL---HKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETT-------SEEEEEETTSCEEEEEEC---SSSCEEEEEECSSCTTEEE
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCC-------CCEEEEECCCCEEEEecc---CCCcEEEEEECCCCCCEEE
Confidence 55544322211 11122222 256666677654 468899985443333321 1111112222 454 777
Q ss_pred EeCccCCCccCCceEEEeCCCCc----eeecccCccCCcceEEEEE---CCeEEEEeeCCCcceEEEeCCCC
Q 017349 233 TEGWTWPFMFSPRGGVYDINKDT----WNLMSDGMKEGWTGISIVL---EGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 233 ~gG~~~~~~~~~~i~~yd~~~~~----W~~~~~~~~~~~~~~~~~~---~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
.|+.+ ..+.+||+.+.. ...... ..... .++.+ ++++++.++. ...+..||..+.
T Consensus 222 s~~~d------~~i~iwd~~~~~~~~~~~~~~~-~~~~v--~~~~~s~~~~~~l~~~~~-d~~i~iwd~~~~ 283 (383)
T 3ei3_B 222 TSSVD------ATVKLWDLRNIKDKNSYIAEMP-HEKPV--NAAYFNPTDSTKLLTTDQ-RNEIRVYSSYDW 283 (383)
T ss_dssp EEETT------SEEEEEEGGGCCSTTCEEEEEE-CSSCE--EEEEECTTTSCEEEEEES-SSEEEEEETTBT
T ss_pred EEeCC------CEEEEEeCCCCCcccceEEEec-CCCce--EEEEEcCCCCCEEEEEcC-CCcEEEEECCCC
Confidence 77765 578999998732 221111 11111 12222 5677777765 568899998754
No 138
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.67 Score=41.37 Aligned_cols=182 Identities=8% Similarity=0.036 Sum_probs=88.9
Q ss_pred ceeEEEeeCCCCCee-eCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC--ceeccCCCCC
Q 017349 91 RIQWQALDPRSGRWF-VLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN--QWQLASPMLT 167 (373)
Q Consensus 91 ~~~~~~~d~~~~~W~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~ 167 (373)
...+.+||..+..-. .+..+.. .....+.....++.+++.|+.+ ..+.+||..+. ....+..+..
T Consensus 44 d~~v~iw~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~d-------g~v~vw~~~~~~~~~~~~~~~~~ 111 (416)
T 2pm9_A 44 DSSLELWSLLAADSEKPIASLQV-----DSKFNDLDWSHNNKIIAGALDN-------GSLELYSTNEANNAINSMARFSN 111 (416)
T ss_dssp CCCCEEEESSSGGGCSCSCCCCC-----SSCEEEEEECSSSSCEEEEESS-------SCEEEECCSSTTSCCCEEEECCC
T ss_pred CCeEEEEEccCCCCCcEEEEEec-----CCceEEEEECCCCCeEEEEccC-------CeEEEeecccccccccchhhccC
Confidence 345777888765422 2222221 1233444444567777776652 25888888762 1112221211
Q ss_pred c-ceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCe------EE-eccCCccccccc-cEEEE-C-CEEEEEe
Q 017349 168 P-RSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDT------WT-TAAKLRMGLARY-DSAVM-G-SKMYVTE 234 (373)
Q Consensus 168 ~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~------W~-~~~~~~~~~~~~-~~~~~-~-~~lyv~g 234 (373)
. ..-..+... ++.+++.|+.+ ..+.+||..+.. -. .+.......... +.+.. + +.+++.|
T Consensus 112 h~~~v~~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 184 (416)
T 2pm9_A 112 HSSSVKTVKFNAKQDNVLASGGNN-------GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASA 184 (416)
T ss_dssp SSSCCCEEEECSSSTTBEEEECSS-------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEE
T ss_pred CccceEEEEEcCCCCCEEEEEcCC-------CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEE
Confidence 1 111222222 26677777664 348888887764 11 111111111111 22222 3 5677777
Q ss_pred CccCCCccCCceEEEeCCCCceeecccCcc-C---CcceEEEEE--CC-eEEEEeeCCC--cceEEEeCCCC
Q 017349 235 GWTWPFMFSPRGGVYDINKDTWNLMSDGMK-E---GWTGISIVL--EG-KLFVISEHGD--CPMKQYNPDDD 297 (373)
Q Consensus 235 G~~~~~~~~~~i~~yd~~~~~W~~~~~~~~-~---~~~~~~~~~--~~-~l~v~gg~~~--~~~~~yd~~~~ 297 (373)
+.+ ..+.+||+.+++-...-.... . ...-.++.+ ++ .+++.++.+. ..+..||..+.
T Consensus 185 ~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 185 GSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp SSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred cCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 765 579999998876432211110 0 111112222 23 5777766531 28899998764
No 139
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.36 Score=42.07 Aligned_cols=160 Identities=11% Similarity=0.055 Sum_probs=81.6
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC--CceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceE
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT--NQWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAV 198 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t--~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 198 (373)
+.....++..++.|+.+ ..+.+||... ..++.+..+.........+.+ ++.+++.|+.+ ..+
T Consensus 112 ~v~~sp~g~~las~s~D-------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-------~~i 177 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRD-------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-------DTV 177 (330)
T ss_dssp EEEECTTSCEEEEEETT-------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-------SCE
T ss_pred EEEECCCCCEEEEEeCC-------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-------CeE
Confidence 34444467777777652 2578888743 234333222211111112222 46667777765 357
Q ss_pred EEEeCCCCeEEeccCCccccccccEEEE--C--CEEEEEeCccCCCccCCceEEEeCCCC------ceeecccCc--cCC
Q 017349 199 ECYDPESDTWTTAAKLRMGLARYDSAVM--G--SKMYVTEGWTWPFMFSPRGGVYDINKD------TWNLMSDGM--KEG 266 (373)
Q Consensus 199 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~--~~lyv~gG~~~~~~~~~~i~~yd~~~~------~W~~~~~~~--~~~ 266 (373)
.++|..++.|+.+..+......-..+.+ + +..++.|+.+ ..+.+||..++ .|....... ...
T Consensus 178 ~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D------~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~ 251 (330)
T 2hes_X 178 RIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD------STVRVWKYMGDDEDDQQEWVCEAILPDVHKR 251 (330)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT------SCEEEEEEEEECTTSCEEEEEEEECCSCCSS
T ss_pred EEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC------CeEEEEEecCCCccccceeEEeeeccccccc
Confidence 7888888777665444332221112222 2 3455566655 46777776543 344332211 111
Q ss_pred cceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeec
Q 017349 267 WTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 267 ~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~ 303 (373)
.....+...+.+++.||. ...+.+||..++.|..+.
T Consensus 252 ~v~~v~~s~~~~l~s~~~-dg~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 252 QVYNVAWGFNGLIASVGA-DGVLAVYEEVDGEWKVFA 287 (330)
T ss_dssp CEEEEEECTTSCEEEEET-TSCEEEEEEETTEEEEEE
T ss_pred ceEEEEEcCCCEEEEEeC-CCEEEEEEcCCCceEEEe
Confidence 111112224445555554 568889998888886654
No 140
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.06 E-value=0.79 Score=41.38 Aligned_cols=205 Identities=11% Similarity=0.074 Sum_probs=113.4
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCc----eeccCCCCC
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQ----WQLASPMLT 167 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~----W~~~~~~~~ 167 (373)
.++..+|+....+..+..-. ....+.+....++.||+.--. ...++++++.... ...+....
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~------~~~~~l~~d~~~~~lywsD~~-------~~~I~~~~~~g~~~~~~~~~~~~~~- 157 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNL------RNVVALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRD- 157 (400)
T ss_dssp TEEEEECTTSCSCEEEECSC------SCEEEEEEETTTTEEEEEETT-------TTEEEEEEC------CCCEEEECSS-
T ss_pred ceeEEEccCCcceeEecccc------CcceEEeeeeccCceEEEecC-------CCeEEEEEcccCCCCCcceEEEeCC-
Confidence 56788888887776653211 134556665557999998432 3478889886521 22221111
Q ss_pred cceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc--CCccccccccEEEE--CCEEEEEeCccCCCc
Q 017349 168 PRSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAA--KLRMGLARYDSAVM--GSKMYVTEGWTWPFM 241 (373)
Q Consensus 168 ~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~ 241 (373)
.....++++ .+++||+.-... ..++++++....-+.+. .+..| ...++. ++.||+.--.
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~-------~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~----- 222 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVL-------GTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----- 222 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTT-------TEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECS-----
T ss_pred CCCcccEEEEecCCceEEEECCC-------CeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCC-----
Confidence 112233444 378999985432 46889998876544442 22222 123332 6889987421
Q ss_pred cCCceEEEeCCCCceeecccCccCCc-ceEEEE-ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEE
Q 017349 242 FSPRGGVYDINKDTWNLMSDGMKEGW-TGISIV-LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVN 319 (373)
Q Consensus 242 ~~~~i~~yd~~~~~W~~~~~~~~~~~-~~~~~~-~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 319 (373)
....|+++++....=+.+.. ..... .+.++- .+++||+.... ...|+++|++...-..+...+ ......++++
T Consensus 223 ~~~~I~~~~~dG~~~~~~~~-~~l~~P~glavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~~~~---~~l~~P~gl~ 297 (400)
T 3p5b_L 223 TPAKIKKGGLNGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDE---KRLAHPFSLA 297 (400)
T ss_dssp SSCCEEEEETTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCCCEEEEECS---STTSSEEEEE
T ss_pred CCCEEEEEeCCCCccEEEEE-CCCCceEEEEEEeCCCEEEEEECC-CCEEEEEeCCCCccEEEEeCC---CCCCCCEEEE
Confidence 12578999886543222211 11111 122222 36889998653 678999998765444443211 1113457888
Q ss_pred EeCCEEEEEeC
Q 017349 320 GVEGKIYVVSS 330 (373)
Q Consensus 320 ~~~~~l~i~GG 330 (373)
..++.||+.--
T Consensus 298 v~~~~lywtd~ 308 (400)
T 3p5b_L 298 VFEDKVFWTDI 308 (400)
T ss_dssp EETTEEEEEES
T ss_pred EeCCEEEEecC
Confidence 88999998873
No 141
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.02 E-value=0.68 Score=40.24 Aligned_cols=202 Identities=10% Similarity=0.069 Sum_probs=110.7
Q ss_pred eeEEEeeCCCCCeeeCC-CCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC----Cceecc-C-C
Q 017349 92 IQWQALDPRSGRWFVLP-PMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT----NQWQLA-S-P 164 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t----~~W~~~-~-~ 164 (373)
..+..+|+.+.....+. .+. ...+.+....++.||+.... ...++++++.. ..-..+ + .
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~-------~p~g~~~d~~~~~ly~~D~~-------~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLR-------NVVALDTEVASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCS-------SEEEEEEETTTTEEEEEETT-------TTEEEEEEC--------CEEEECSS
T ss_pred CeEEEEECCCcceEehhcCCC-------ceEEEEEEeCCCEEEEEECC-------CCcEEEEECCCCCCCcccEEEEeCC
Confidence 45788898887765542 222 33555555447899998542 34799999876 222222 1 1
Q ss_pred CCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc--CCccccccccEEEE--CCEEEEEeCccC
Q 017349 165 MLTPRSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAA--KLRMGLARYDSAVM--GSKMYVTEGWTW 238 (373)
Q Consensus 165 ~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~--~~~lyv~gG~~~ 238 (373)
+.. ..++++ .+++||+.-.. ...++++|+....-+.+. .+..| ...++. ++.||+.....
T Consensus 76 ~~~---p~glavd~~~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~- 141 (316)
T 1ijq_A 76 IQA---PDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT- 141 (316)
T ss_dssp CSC---CCEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS-
T ss_pred CCC---cCEEEEeecCCeEEEEECC-------CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC-
Confidence 111 234444 47899987433 246889998765433332 22222 223343 68899875211
Q ss_pred CCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccce
Q 017349 239 PFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPF 316 (373)
Q Consensus 239 ~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 316 (373)
...|+++++....-+.+.. .........++- +++||+.... ...|+++|.+...-+.+.... .......
T Consensus 142 ----~~~I~~~~~dG~~~~~~~~-~~~~~P~gla~d~~~~~lY~~D~~-~~~I~~~d~dg~~~~~~~~~~---~~~~~P~ 212 (316)
T 1ijq_A 142 ----PAKIKKGGLNGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDE---KRLAHPF 212 (316)
T ss_dssp ----SCEEEEEETTSCCEEEEEC-SSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEEECT---TTTSSEE
T ss_pred ----CCeEEEEcCCCCCeEEEEE-CCCCCceEEEEeccCCEEEEEECC-CCeEEEEecCCCceEEEeecC---CccCCcE
Confidence 2578999886443222221 111111122332 6889998653 668999999754433432211 0113447
Q ss_pred EEEEeCCEEEEEeC
Q 017349 317 AVNGVEGKIYVVSS 330 (373)
Q Consensus 317 ~~~~~~~~l~i~GG 330 (373)
+++..++.||+.--
T Consensus 213 giav~~~~ly~~d~ 226 (316)
T 1ijq_A 213 SLAVFEDKVFWTDI 226 (316)
T ss_dssp EEEEETTEEEEEET
T ss_pred EEEEECCEEEEEEC
Confidence 77778888988774
No 142
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.00 E-value=0.78 Score=40.69 Aligned_cols=108 Identities=10% Similarity=0.066 Sum_probs=54.8
Q ss_pred CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCC-ccc---cccccEEEE--CCEEEEEeCccCCCccCCceEEEeC
Q 017349 178 NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKL-RMG---LARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDI 251 (373)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~---~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~ 251 (373)
++ +++.|+.+ ..+.+||..+.+-...-.. ... ......+.+ ++++++.|+.++ ....+.+||.
T Consensus 197 ~~-~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~---~~g~i~i~d~ 265 (397)
T 1sq9_A 197 RG-LIATGFNN-------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN---SFGCITLYET 265 (397)
T ss_dssp TS-EEEEECTT-------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET---TEEEEEEEET
T ss_pred Cc-eEEEEeCC-------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC---CCceEEEEEC
Confidence 45 66666654 4688999988754322111 001 111112222 566666665430 0136889999
Q ss_pred CCCcee-ecccCc-----------cCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCc
Q 017349 252 NKDTWN-LMSDGM-----------KEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 252 ~~~~W~-~~~~~~-----------~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
.+++-. .+..+. ..... .++.+ ++++++.|+. ...+.+||..+.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 266 EFGERIGSLSVPTHSSQASLGEFAHSSWV-MSLSFNDSGETLCSAGW-DGKLRFWDVKTKE 324 (397)
T ss_dssp TTCCEEEEECBC--------CCBSBSSCE-EEEEECSSSSEEEEEET-TSEEEEEETTTTE
T ss_pred CCCcccceeccCcccccccccccccCCcE-EEEEECCCCCEEEEEeC-CCeEEEEEcCCCc
Confidence 876422 111100 11111 12233 5677777664 5689999997664
No 143
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=95.99 E-value=0.8 Score=40.76 Aligned_cols=182 Identities=10% Similarity=0.105 Sum_probs=89.8
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCc--eeccCCCCCcce
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQ--WQLASPMLTPRS 170 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r~ 170 (373)
.+.+||..+..-...-....+......-...+....++.+++.|+.++ .+.+||..... -..+.. ....
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-------~v~~wd~~~~~~~~~~~~~--h~~~ 251 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-------TVRLWDLRITSRAVRTYHG--HEGD 251 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-------CEEEEETTTTCCCCEEECC--CSSC
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-------eEEEEECCCCCcceEEECC--cCCC
Confidence 477889888765433221111101111122222233677888887632 68888976331 111110 0111
Q ss_pred eeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCC-cc----ccccccEEE--ECCEEEEEeCccCCCcc
Q 017349 171 FFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKL-RM----GLARYDSAV--MGSKMYVTEGWTWPFMF 242 (373)
Q Consensus 171 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~----~~~~~~~~~--~~~~lyv~gG~~~~~~~ 242 (373)
-.+++.. +++.++.|+.+ ..+.+||..++.-...-.. +. .......+. .+|++++.|+.+
T Consensus 252 v~~v~~~p~~~~l~s~s~D-------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----- 319 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDD-------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN----- 319 (380)
T ss_dssp CCEEEECTTSSEEEEECSS-------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----
T ss_pred eEEEEEecCCCeEEEEcCC-------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----
Confidence 1122222 56677777765 3588999988754322111 11 011112222 367777777665
Q ss_pred CCceEEEeCCCCceee-cccC--ccCCc-ceEEEEECCeEEEEeeCCCcceEEEeCCCC
Q 017349 243 SPRGGVYDINKDTWNL-MSDG--MKEGW-TGISIVLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 243 ~~~i~~yd~~~~~W~~-~~~~--~~~~~-~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
..+.+||..+++-.. +... ..... ...+..-+++.++.|+. ...+.+|+....
T Consensus 320 -g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~-D~~i~iW~~~~~ 376 (380)
T 3iz6_a 320 -GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW-DKNLKIWAFSGH 376 (380)
T ss_dssp -SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT-TSCEEEEECCSS
T ss_pred -CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC-CCCEEEEecCCC
Confidence 579999987765432 2110 01111 11112236777777765 567778877543
No 144
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.98 E-value=0.33 Score=46.09 Aligned_cols=157 Identities=12% Similarity=0.103 Sum_probs=79.1
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe-CCe-EEEEcCCCCCCCCcCceE
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NGK-IMAVGGTGANINETMTAV 198 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~ 198 (373)
..+..+..++..++.++... .....++.||... .-..+.. ....-..+... ++. +++.|+.+ ..+
T Consensus 119 v~~~~~s~~~~~l~~~~~~~---~~~~~v~~~d~~~-~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d-------~~v 185 (615)
T 1pgu_A 119 ISDISWDFEGRRLCVVGEGR---DNFGVFISWDSGN-SLGEVSG--HSQRINACHLKQSRPMRSMTVGDD-------GSV 185 (615)
T ss_dssp EEEEEECTTSSEEEEEECCS---SCSEEEEETTTCC-EEEECCS--CSSCEEEEEECSSSSCEEEEEETT-------TEE
T ss_pred EEEEEEeCCCCEEEEeccCC---CCccEEEEEECCC-cceeeec--CCccEEEEEECCCCCcEEEEEeCC-------CcE
Confidence 33444444666666665421 1234677777221 1111111 11111122222 333 66666654 468
Q ss_pred EEEeCCCCeEEeccCCccccc---cc-cEEEE-C-CEEEEEeCccCCCccCCceEEEeCCCCceeecc-c---CccCCcc
Q 017349 199 ECYDPESDTWTTAAKLRMGLA---RY-DSAVM-G-SKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMS-D---GMKEGWT 268 (373)
Q Consensus 199 ~~yd~~t~~W~~~~~~~~~~~---~~-~~~~~-~-~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~-~---~~~~~~~ 268 (373)
.+||..+.+-... +..... .. ..+.. + +++++.|+.+ ..+.+||..+++-...- . .......
T Consensus 186 ~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~~~v~ 257 (615)
T 1pgu_A 186 VFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSD------RKISCFDGKSGEFLKYIEDDQEPVQGGIF 257 (615)
T ss_dssp EEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETT------CCEEEEETTTCCEEEECCBTTBCCCSCEE
T ss_pred EEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCC------CeEEEEECCCCCEeEEecccccccCCceE
Confidence 8898877653222 221111 11 22222 5 6777777765 57999999887643221 1 1112222
Q ss_pred eEEEEECCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 269 GISIVLEGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 269 ~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
..... +++.++.++. ...+..||..+.+-.
T Consensus 258 ~~~~~-~~~~l~~~~~-d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 258 ALSWL-DSQKFATVGA-DATIRVWDVTTSKCV 287 (615)
T ss_dssp EEEES-SSSEEEEEET-TSEEEEEETTTTEEE
T ss_pred EEEEc-CCCEEEEEcC-CCcEEEEECCCCcEE
Confidence 22223 7777777775 568999999876543
No 145
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.97 E-value=0.24 Score=43.92 Aligned_cols=172 Identities=8% Similarity=0.010 Sum_probs=85.5
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEecc-CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPR-QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
.+.++|..+++.... +.... ....+..+.. ++.+++.++.+ ..+.+||..+.+-...-........
T Consensus 162 ~v~iwd~~~~~~~~~--~~~h~----~~v~~v~~s~~~~~~~~s~~~d-------g~v~~wd~~~~~~~~~~~~~~~~~~ 228 (357)
T 4g56_B 162 SVKVWDLSQKAVLKS--YNAHS----SEVNCVAACPGKDTIFLSCGED-------GRILLWDTRKPKPATRIDFCASDTI 228 (357)
T ss_dssp CEEEEETTTTEEEEE--ECCCS----SCEEEEEECTTCSSCEEEEETT-------SCEEECCTTSSSCBCBCCCTTCCSC
T ss_pred eEEEEECCCCcEEEE--EcCCC----CCEEEEEEccCCCceeeeeccC-------CceEEEECCCCceeeeeeecccccc
Confidence 367788877654332 22100 1222222322 33567776652 2588899877654332222212222
Q ss_pred e-eeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccc-cEEEE-CC-EEEEEeCccCCCccCCc
Q 017349 172 F-ASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARY-DSAVM-GS-KMYVTEGWTWPFMFSPR 245 (373)
Q Consensus 172 ~-~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~-~~~~~-~~-~lyv~gG~~~~~~~~~~ 245 (373)
. +++.. ++++++.|+.+ ..+.+||..+.+-. ..+....... ..+.. ++ ++++.|+.+ ..
T Consensus 229 v~~v~~sp~~~~~la~g~~d-------~~i~~wd~~~~~~~--~~~~~~~~~v~~l~~sp~~~~~lasgs~D------~~ 293 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDET-------GNVSLVNIKNPDSA--QTSAVHSQNITGLAYSYHSSPFLASISED------CT 293 (357)
T ss_dssp EEEEEECTTSTTEEEEEESS-------SCEEEEESSCGGGC--EEECCCSSCEEEEEECSSSSCCEEEEETT------SC
T ss_pred ccchhhhhcccceEEEeecc-------cceeEEECCCCcEe--EEEeccceeEEEEEEcCCCCCEEEEEeCC------CE
Confidence 2 22222 45677777664 34888998765421 1111111111 12222 34 566666655 57
Q ss_pred eEEEeCCCCceeecccCccCCcceEEEE---ECCeEEEEeeCCCcceEEEeCCC
Q 017349 246 GGVYDINKDTWNLMSDGMKEGWTGISIV---LEGKLFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 246 i~~yd~~~~~W~~~~~~~~~~~~~~~~~---~~~~l~v~gg~~~~~~~~yd~~~ 296 (373)
+.+||..+++-...-. . ..... ++. .++++++.||. ...+.+||...
T Consensus 294 i~iwd~~~~~~~~~~~-H-~~~V~-~vafsP~d~~~l~s~s~-Dg~v~iW~~~~ 343 (357)
T 4g56_B 294 VAVLDADFSEVFRDLS-H-RDFVT-GVAWSPLDHSKFTTVGW-DHKVLHHHLPS 343 (357)
T ss_dssp EEEECTTSCEEEEECC-C-SSCEE-EEEECSSSTTEEEEEET-TSCEEEEECC-
T ss_pred EEEEECCCCcEeEECC-C-CCCEE-EEEEeCCCCCEEEEEcC-CCeEEEEECCC
Confidence 8999998876432211 1 11111 233 25777777775 56788888754
No 146
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.97 E-value=0.66 Score=39.59 Aligned_cols=208 Identities=9% Similarity=0.006 Sum_probs=98.9
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.++|..+.+....-.+.... ....+.....++..++.|+.+ ..+.+||..+++-...-.... ...
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~----~~V~~v~~~~~~~~l~sgs~D-------g~v~iw~~~~~~~~~~~~~h~--~~~ 112 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPG----EYISSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKRLRNMTSHS--ARV 112 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTT----CCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECCS--SCE
T ss_pred EEEEEECCCCCEEEEEEecCCC----CeEEEEEECCCCCEEEEEECC-------CcEEEeecCCceeEEEecCcc--ceE
Confidence 5888999988765543333111 223444455577777887762 268899998875432211111 112
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccccc--EEEECCEEEEEeCccCCCccCCceEEEe
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYD--SAVMGSKMYVTEGWTWPFMFSPRGGVYD 250 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~--~~~~~~~lyv~gG~~~~~~~~~~i~~yd 250 (373)
......+.+.+.|+.+ ..+..++..+...... .+........ ....+++.++.++.+ ..+.+||
T Consensus 113 ~~~~~~~~~l~s~~~~-------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd 178 (318)
T 4ggc_A 113 GSLSWNSYILSSGSRS-------GHIHHHDVRVAEHHVA-TLSGHSQEVCGLRWAPDGRHLASGGND------NLVNVWP 178 (318)
T ss_dssp EEEEEETTEEEEEETT-------SEEEEEETTSSSCEEE-EEECCSSCEEEEEECTTSSEEEEEETT------SCEEEEE
T ss_pred EEeecCCCEEEEEecC-------CceEeeecCCCceeEE-EEcCccCceEEEEEcCCCCEEEEEecC------cceeEEE
Confidence 2233445555555543 2344555444432211 1111111111 122256666666665 5788999
Q ss_pred CCCCceee--ccc-CccCCcceEEEE--ECCeE-EEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCE
Q 017349 251 INKDTWNL--MSD-GMKEGWTGISIV--LEGKL-FVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGK 324 (373)
Q Consensus 251 ~~~~~W~~--~~~-~~~~~~~~~~~~--~~~~l-~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (373)
..+++-.. ... ............ .++.+ .+.+|.....+..+|.....-........+ .........++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~----v~~~~~~~~~~~ 254 (318)
T 4ggc_A 179 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ----VCSILWSPHYKE 254 (318)
T ss_dssp SSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSC----EEEEEEETTTTE
T ss_pred CCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceee----eeeeeecccccc
Confidence 98764221 111 011111111111 13344 444555466788889877655443321211 222222334555
Q ss_pred EEEEeCC
Q 017349 325 IYVVSSG 331 (373)
Q Consensus 325 l~i~GG~ 331 (373)
+++.+|.
T Consensus 255 ~~~~sg~ 261 (318)
T 4ggc_A 255 LISGHGF 261 (318)
T ss_dssp EEEEECT
T ss_pred eEEEEEc
Confidence 6666554
No 147
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.96 E-value=0.84 Score=40.73 Aligned_cols=149 Identities=10% Similarity=0.113 Sum_probs=76.1
Q ss_pred CEEEEEcCccCCCCCCcceeEEEeCCCCc------ee-ccCCCC-CcceeeeeeEe-C-CeEEEEcCCCCCCCCcCceEE
Q 017349 130 GKLFVLGGMRSDTETPMQSTIMYRATTNQ------WQ-LASPML-TPRSFFASGNV-N-GKIMAVGGTGANINETMTAVE 199 (373)
Q Consensus 130 ~~i~v~GG~~~~~~~~~~~~~~yd~~t~~------W~-~~~~~~-~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~ 199 (373)
+.+++.|+.+ ..+.+||..+.. -. .+.... .......+... + +.+++.|+.+ ..+.
T Consensus 126 ~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~v~ 191 (416)
T 2pm9_A 126 DNVLASGGNN-------GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-------NFAS 191 (416)
T ss_dssp TTBEEEECSS-------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-------SCEE
T ss_pred CCEEEEEcCC-------CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-------CCEE
Confidence 6677777652 258889988765 11 111111 11111222222 2 5677777764 3588
Q ss_pred EEeCCCCeEEeccCCccc----ccc-ccEEEE-CC-EEEEEeCccCCCccCCceEEEeCCCCce--eecccCccCCcceE
Q 017349 200 CYDPESDTWTTAAKLRMG----LAR-YDSAVM-GS-KMYVTEGWTWPFMFSPRGGVYDINKDTW--NLMSDGMKEGWTGI 270 (373)
Q Consensus 200 ~yd~~t~~W~~~~~~~~~----~~~-~~~~~~-~~-~lyv~gG~~~~~~~~~~i~~yd~~~~~W--~~~~~~~~~~~~~~ 270 (373)
+||..+.+-...-..+.. ... ...+.. ++ .+++.++.++ ....+.+||..+..- ..+...... . -.
T Consensus 192 iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~~~~i~~~d~~~~~~~~~~~~~~~~~-~-v~ 266 (416)
T 2pm9_A 192 IWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD---NDPSILIWDLRNANTPLQTLNQGHQK-G-IL 266 (416)
T ss_dssp EEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS---SSCCCCEEETTSTTSCSBCCCSCCSS-C-EE
T ss_pred EEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC---CCceEEEEeCCCCCCCcEEeecCccC-c-ee
Confidence 999988765333222211 111 122222 33 4666666541 112688999987531 111100111 1 11
Q ss_pred EEEE---CCeEEEEeeCCCcceEEEeCCCCc
Q 017349 271 SIVL---EGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 271 ~~~~---~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
++.+ ++++++.|+. ...+..||..+.+
T Consensus 267 ~~~~s~~~~~~l~s~~~-dg~v~~wd~~~~~ 296 (416)
T 2pm9_A 267 SLDWCHQDEHLLLSSGR-DNTVLLWNPESAE 296 (416)
T ss_dssp EEEECSSCSSCEEEEES-SSEEEEECSSSCC
T ss_pred EEEeCCCCCCeEEEEeC-CCCEEEeeCCCCc
Confidence 2333 6777777765 5689999987764
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.94 E-value=0.34 Score=47.21 Aligned_cols=108 Identities=7% Similarity=-0.021 Sum_probs=55.9
Q ss_pred CceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCC-ceeecccCccCCc----
Q 017349 195 MTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKD-TWNLMSDGMKEGW---- 267 (373)
Q Consensus 195 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~-~W~~~~~~~~~~~---- 267 (373)
...++++|..+++-+.+............+.. +|+..+++..+ .......+..+|+.++ ..+.+........
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVN-RAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEEC-TTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeC-CCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 35789999998876555422111111112222 66544443332 1122347899999988 6655432111111
Q ss_pred ceEEEEE--CCeEEEEeeCC-CcceEEEeCCCCceeeec
Q 017349 268 TGISIVL--EGKLFVISEHG-DCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 268 ~~~~~~~--~~~l~v~gg~~-~~~~~~yd~~~~~W~~~~ 303 (373)
......- +|++++.+..+ ...++.+|...+....+.
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC
T ss_pred CCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC
Confidence 1112222 77766555432 456788887666666654
No 149
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.94 E-value=0.24 Score=45.19 Aligned_cols=189 Identities=9% Similarity=-0.002 Sum_probs=92.1
Q ss_pred CEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC
Q 017349 78 PYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN 157 (373)
Q Consensus 78 ~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~ 157 (373)
+.+++.|+.+ ..+.++|..+..-..+-.+. .. ...-.+.+....++.+++.|+.+ + .+.+||..++
T Consensus 132 ~~~lasGs~d----g~i~lWd~~~~~~~~~~~~~-gH--~~~V~~l~f~p~~~~~l~s~s~D--~-----~v~iwd~~~~ 197 (435)
T 4e54_B 132 PSTVAVGSKG----GDIMLWNFGIKDKPTFIKGI-GA--GGSITGLKFNPLNTNQFYASSME--G-----TTRLQDFKGN 197 (435)
T ss_dssp TTCEEEEETT----SCEEEECSSCCSCCEEECCC-SS--SCCCCEEEECSSCTTEEEEECSS--S-----CEEEEETTSC
T ss_pred CCEEEEEeCC----CEEEEEECCCCCceeEEEcc-CC--CCCEEEEEEeCCCCCEEEEEeCC--C-----EEEEeeccCC
Confidence 3455555432 23777888766543322221 00 00112222222356677777653 2 5888998877
Q ss_pred ceeccCCCCCcce-eeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--C-CEEEE
Q 017349 158 QWQLASPMLTPRS-FFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--G-SKMYV 232 (373)
Q Consensus 158 ~W~~~~~~~~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~-~~lyv 232 (373)
....+........ ..++.. -++++++.|+.+ ..+.++|..+.. +..+......-..+.+ + ..+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-------g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNV-------GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSS-------SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCC-------CcEeeeccCcce---eEEEecccceEEeeeecCCCceEEE
Confidence 6544332221111 112222 256777777765 358888886543 2222221111122222 3 34666
Q ss_pred EeCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEE--ECCeEEEEeeCCCcceEEEeCCCC
Q 017349 233 TEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIV--LEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 233 ~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~--~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
.|+.+ ..+.+||+.+..-...-.......... ++. -+++.++.|+. ...+.+||..+.
T Consensus 268 s~s~d------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~-D~~i~iwd~~~~ 328 (435)
T 4e54_B 268 TASVD------QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ-KSEIRVYSASQW 328 (435)
T ss_dssp EEETT------SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES-SSCEEEEESSSS
T ss_pred EecCc------ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcC-CCEEEEEECCCC
Confidence 67665 467889987654322110011111111 111 25666666665 567889998654
No 150
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.94 E-value=0.73 Score=39.94 Aligned_cols=219 Identities=11% Similarity=0.065 Sum_probs=112.1
Q ss_pred ceeEEEeeCCCCCeeeCCCCCCCC--------------CCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 91 RIQWQALDPRSGRWFVLPPMPCPK--------------AVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 91 ~~~~~~~d~~~~~W~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
...++.||+.+..+..+....... .....-++.+....++.|||.... ..+.++|+.+
T Consensus 39 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~--------~~i~~~d~~~ 110 (322)
T 2fp8_A 39 DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY--------YHLSVVGSEG 110 (322)
T ss_dssp TSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT--------TEEEEECTTC
T ss_pred CCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC--------CCEEEEeCCC
Confidence 346888999887765442111000 000122444443226899997432 2488999887
Q ss_pred CceeccCCCCCc---ceeeeeeE-e-CCeEEEEcCCCCCC----------CCcCceEEEEeCCCCeEEecc-CCcccccc
Q 017349 157 NQWQLASPMLTP---RSFFASGN-V-NGKIMAVGGTGANI----------NETMTAVECYDPESDTWTTAA-KLRMGLAR 220 (373)
Q Consensus 157 ~~W~~~~~~~~~---r~~~~~~~-~-~~~iyv~GG~~~~~----------~~~~~~~~~yd~~t~~W~~~~-~~~~~~~~ 220 (373)
+..+.+...... .....++. - ++.||+........ ......+++||+.+++.+.+. .+.. .
T Consensus 111 g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~---p 187 (322)
T 2fp8_A 111 GHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHV---P 187 (322)
T ss_dssp EECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESC---C
T ss_pred CEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCcc---C
Confidence 765554322111 11122333 3 57898864221000 012356899999888765442 1111 1
Q ss_pred ccEEEE-CC-EEEEEeCccCCCccCCceEEEeCCCC---ceeecccCccCCcceEEEEECCeEEEEeeC--------C-C
Q 017349 221 YDSAVM-GS-KMYVTEGWTWPFMFSPRGGVYDINKD---TWNLMSDGMKEGWTGISIVLEGKLFVISEH--------G-D 286 (373)
Q Consensus 221 ~~~~~~-~~-~lyv~gG~~~~~~~~~~i~~yd~~~~---~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~--------~-~ 286 (373)
...+.. ++ .||+.-... ..|.+||+... ..+.+.. .+. -.+.++--+|+||+.... . .
T Consensus 188 ~gia~~~dg~~lyv~d~~~------~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~ 259 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLS------HQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVD 259 (322)
T ss_dssp CEEEECTTSSEEEEEEGGG------TEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEE
T ss_pred cceEECCCCCEEEEEeCCC------CeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCcccccccCCCc
Confidence 123333 44 488774332 57999998753 3333322 211 122223336789987543 1 3
Q ss_pred cceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEEEEEeC
Q 017349 287 CPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 287 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
..+.+||++.+.-..+.. +.. .......+++..+++|||.+.
T Consensus 260 ~~v~~~d~~G~~~~~~~~-~~g-~~~~~~~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 260 PKGIKFDEFGNILEVIPL-PPP-FAGEHFEQIQEHDGLLYIGTL 301 (322)
T ss_dssp EEEEEECTTSCEEEEEEC-CTT-TTTSCCCEEEEETTEEEEECS
T ss_pred cEEEEECCCCCEEEEEEC-CCC-CccccceEEEEeCCEEEEeec
Confidence 478999997554444442 211 001234455567899998764
No 151
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.91 E-value=0.89 Score=40.69 Aligned_cols=205 Identities=6% Similarity=-0.029 Sum_probs=101.7
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCC-Cccee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPML-TPRSF 171 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~ 171 (373)
.+.+||..+..-...-.-. .....+.....++.+++.|+.+ ..+.+||..+.+-.. .+. ....-
T Consensus 120 ~i~iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~~~--~~~~h~~~v 184 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAH------VSEITKLKFFPSGEALISSSQD-------MQLKIWSVKDGSNPR--TLIGHRATV 184 (420)
T ss_dssp CEEEECTTSCEEEEETTSS------SSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTCCCCE--EEECCSSCE
T ss_pred CEEEEeCCCcceeeecccc------cCccEEEEECCCCCEEEEEeCC-------CeEEEEeCCCCcCce--EEcCCCCcE
Confidence 4777887766543331111 1223333444466666776652 268999987764221 111 11111
Q ss_pred eeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec-cCCcccccc-ccE----------------------EEE
Q 017349 172 FASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTA-AKLRMGLAR-YDS----------------------AVM 226 (373)
Q Consensus 172 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~~~~-~~~----------------------~~~ 226 (373)
..++.. +++.++.|+.+ ..+.+||..+++-... .....+... ... ..-
T Consensus 185 ~~~~~~~~~~~l~s~~~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 185 TDIAIIDRGRNVLSASLD-------GTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp EEEEEETTTTEEEEEETT-------SCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred EEEEEcCCCCEEEEEcCC-------CcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 222222 55666666654 3588899887753222 111000000 000 112
Q ss_pred CCEEEEEeCccCCCccCCceEEEeCCCCceee-cccCccCCcceEEEEECCe-EEEEeeCCCcceEEEeCCCCce--eee
Q 017349 227 GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-MSDGMKEGWTGISIVLEGK-LFVISEHGDCPMKQYNPDDDTW--RYV 302 (373)
Q Consensus 227 ~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~-l~v~gg~~~~~~~~yd~~~~~W--~~~ 302 (373)
++++++.|+.+ ..+.+||+.++.-.. +...........+..-++. +++.|+. ...+.+||..+.+- ..+
T Consensus 258 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~-dg~i~vwd~~~~~~~~~~~ 330 (420)
T 3vl1_A 258 YGKYVIAGHVS------GVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE-NGMLAQWDLRSPECPVGEF 330 (420)
T ss_dssp TTEEEEEEETT------SCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET-TSEEEEEETTCTTSCSEEE
T ss_pred CCCEEEEEcCC------CeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC-CCeEEEEEcCCCcCchhhh
Confidence 56777777665 568999998765322 1111111111111122454 6666665 56899999987532 233
Q ss_pred cCCCCCCcccccceEEEEeCCEEEEEeCC
Q 017349 303 GGDKFPCEVMHRPFAVNGVEGKIYVVSSG 331 (373)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~l~i~GG~ 331 (373)
.. ... .....+...++++++.|+.
T Consensus 331 ~~-~~~----~~v~~~~~~~~~~l~s~~~ 354 (420)
T 3vl1_A 331 LI-NEG----TPINNVYFAAGALFVSSGF 354 (420)
T ss_dssp EE-STT----SCEEEEEEETTEEEEEETT
T ss_pred hc-cCC----CCceEEEeCCCCEEEEecC
Confidence 21 011 2223445567888888874
No 152
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.88 E-value=0.81 Score=39.96 Aligned_cols=215 Identities=10% Similarity=0.141 Sum_probs=110.1
Q ss_pred CCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCC-CCcc-eeeeeeEe
Q 017349 100 RSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPM-LTPR-SFFASGNV 177 (373)
Q Consensus 100 ~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~r-~~~~~~~~ 177 (373)
...+|+.+. .+.. ..+........+.+|++|.. ..+++-+-.-.+|+.+... +.+. ....+...
T Consensus 23 ~g~~W~~~~-~~~~-----~~~~~v~~~~~~~~~~~G~~--------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~ 88 (327)
T 2xbg_A 23 DYNPWEAIQ-LPTT-----ATILDMSFIDRHHGWLVGVN--------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQ 88 (327)
T ss_dssp SSCCEEEEE-CSCS-----SCEEEEEESSSSCEEEEETT--------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEE
T ss_pred CCCCceEee-cCCC-----CcEEEEEECCCCcEEEEcCC--------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEec
Confidence 346788775 2311 22333333335678886532 1355554445689987532 2222 23344445
Q ss_pred CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCc-cccccccEE-EECCEEEEEeCccCCCccCCceEEEeCCCCc
Q 017349 178 NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLR-MGLARYDSA-VMGSKMYVTEGWTWPFMFSPRGGVYDINKDT 255 (373)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~~~~~~~~-~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~ 255 (373)
.+.+|++|... .+++-+=.-.+|+.+.... .+-.....+ .-++++|+.+.. ..+++-+-.-.+
T Consensus 89 ~~~~~~~g~~g--------~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-------g~v~~S~DgG~t 153 (327)
T 2xbg_A 89 GNEGWIVGEPP--------IMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV-------GAIYRTKDSGKN 153 (327)
T ss_dssp TTEEEEEEETT--------EEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT-------CCEEEESSTTSS
T ss_pred CCeEEEEECCC--------eEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC-------ccEEEEcCCCCC
Confidence 67888875221 2333222246899886321 111112233 346888887642 235554444568
Q ss_pred eeecccCccCCcceEEEEECCeEEEEeeCCCcceEEE-eCCCCceeeecCCCCCCcccccceEEE-EeCCEEEEEeCCce
Q 017349 256 WNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQY-NPDDDTWRYVGGDKFPCEVMHRPFAVN-GVEGKIYVVSSGLN 333 (373)
Q Consensus 256 W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~y-d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i~GG~~~ 333 (373)
|+.+..+.+.........-+++++++|.. ..+++- |....+|+.+.. +.+ .....++ ..++.+|+++...
T Consensus 154 W~~~~~~~~~~~~~~~~~~~~~~~~~g~~--G~~~~S~d~gG~tW~~~~~-~~~----~~~~~~~~~~~g~~~~~~~~G- 225 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSPSGEYVAVSSR--GSFYSTWEPGQTAWEPHNR-TTS----RRLHNMGFTPDGRLWMIVNGG- 225 (327)
T ss_dssp EEEEECSCCCCEEEEEECTTSCEEEEETT--SSEEEEECTTCSSCEEEEC-CSS----SCEEEEEECTTSCEEEEETTT-
T ss_pred CEEeecCCCcceEEEEEcCCCcEEEEECC--CcEEEEeCCCCCceeECCC-CCC----CccceeEECCCCCEEEEeCCc-
Confidence 99886544333322222225677766643 355554 333578999863 222 2333333 3467888887531
Q ss_pred eeeeEEEEeec-CCcccceEEecCC
Q 017349 334 VAIGRVYEEQN-GGISAEWKVMTAP 357 (373)
Q Consensus 334 ~~~~~~~~~~~-d~~~~~W~~~~~p 357 (373)
.++. . +.....|+.+..|
T Consensus 226 ----~~~~--s~~D~G~tW~~~~~~ 244 (327)
T 2xbg_A 226 ----KIAF--SDPDNSENWGELLSP 244 (327)
T ss_dssp ----EEEE--EETTEEEEECCCBCT
T ss_pred ----eEEE--ecCCCCCeeEeccCC
Confidence 2332 2 2345678877655
No 153
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.87 E-value=0.94 Score=40.64 Aligned_cols=176 Identities=9% Similarity=-0.054 Sum_probs=94.7
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccC--CCCCcc
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLAS--PMLTPR 169 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r 169 (373)
..++++++.......+..... ..-.+.++...++.||+.-.. ...++++++....-+.+. .+..|
T Consensus 138 ~~I~r~~~~g~~~~~~~~~~~-----~~p~glavd~~~g~lY~~d~~-------~~~I~~~~~dg~~~~~l~~~~l~~P- 204 (386)
T 3v65_B 138 DRILRANLNGSNVEEVVSTGL-----ESPGGLAVDWVHDKLYWTDSG-------TSRIEVANLDGAHRKVLLWQSLEKP- 204 (386)
T ss_dssp TEEEEEETTSCCEEEEECSSC-----SCCCCEEEETTTTEEEEEETT-------TTEEEECBTTSCSCEEEECSSCSCE-
T ss_pred CcEEEEecCCCCcEEEEeCCC-----CCccEEEEEeCCCeEEEEcCC-------CCeEEEEeCCCCceEEeecCCCCCC-
Confidence 346667776655444322110 012345555457899987432 337888888755433322 12222
Q ss_pred eeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccc-cEEE--ECCEEEEEeCccCCCccCC
Q 017349 170 SFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARY-DSAV--MGSKMYVTEGWTWPFMFSP 244 (373)
Q Consensus 170 ~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~-~~~~--~~~~lyv~gG~~~~~~~~~ 244 (373)
.++++. ++.||+..-. ....++++++....-+.+..- ....+ +.++ .+++||+.-... .
T Consensus 205 --~giavdp~~g~ly~td~~------~~~~I~r~~~dG~~~~~~~~~--~~~~PnGlavd~~~~~lY~aD~~~------~ 268 (386)
T 3v65_B 205 --RAIALHPMEGTIYWTDWG------NTPRIEASSMDGSGRRIIADT--HLFWPNGLTIDYAGRRMYWVDAKH------H 268 (386)
T ss_dssp --EEEEEETTTTEEEEEECS------SSCEEEEEETTSCSCEEEECS--SCSCEEEEEEEGGGTEEEEEETTT------T
T ss_pred --cEEEEEcCCCeEEEeccC------CCCEEEEEeCCCCCcEEEEEC--CCCCeeeEEEeCCCCEEEEEECCC------C
Confidence 233443 6788887321 135799999876543333211 11112 2333 268999985433 6
Q ss_pred ceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 245 RGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 245 ~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
.|+++|+....-+.+.. .....-...++.++.||+..- ....|.++|..+++
T Consensus 269 ~I~~~d~dG~~~~~~~~-~~~~~P~giav~~~~ly~td~-~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 269 VIERANLDGSHRKAVIS-QGLPHPFAITVFEDSLYWTDW-HTKSINSANKFTGK 320 (386)
T ss_dssp EEEEECTTSCSCEEEEC-SSCSSEEEEEEETTEEEEEET-TTTEEEEEETTTCC
T ss_pred EEEEEeCCCCeeEEEEE-CCCCCceEEEEECCEEEEeeC-CCCeEEEEECCCCc
Confidence 89999986433222211 111111223458999999864 36689999965443
No 154
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.87 E-value=0.93 Score=40.54 Aligned_cols=177 Identities=13% Similarity=0.133 Sum_probs=84.1
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.+||..+.+.... +. .. .....+.....++..++.|+.+ ..+.+||..+++....-... ....
T Consensus 146 ~i~iwd~~~~~~~~~--~~-~h---~~~v~~~~~~p~~~~l~s~s~d-------~~v~iwd~~~~~~~~~~~~~--~~v~ 210 (393)
T 1erj_A 146 LIRIWDIENRKIVMI--LQ-GH---EQDIYSLDYFPSGDKLVSGSGD-------RTVRIWDLRTGQCSLTLSIE--DGVT 210 (393)
T ss_dssp CEEEEETTTTEEEEE--EC-CC---SSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECS--SCEE
T ss_pred eEEEEECCCCcEEEE--Ec-cC---CCCEEEEEEcCCCCEEEEecCC-------CcEEEEECCCCeeEEEEEcC--CCcE
Confidence 477788877654322 11 00 0122233333356566666542 26889999887543221111 1112
Q ss_pred eeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEe-ccCCc---cc-cccccEEEE--CCEEEEEeCccCCCccC
Q 017349 173 ASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTT-AAKLR---MG-LARYDSAVM--GSKMYVTEGWTWPFMFS 243 (373)
Q Consensus 173 ~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~---~~-~~~~~~~~~--~~~lyv~gG~~~~~~~~ 243 (373)
.++.. ++++++.|+.+ ..+.+||..++.-.. +.... .. ...-..+.+ ++++++.|+.+
T Consensus 211 ~~~~~~~~~~~l~~~s~d-------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d------ 277 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLD-------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD------ 277 (393)
T ss_dssp EEEECSTTCCEEEEEETT-------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT------
T ss_pred EEEEECCCCCEEEEEcCC-------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC------
Confidence 22222 56777777765 358899988775322 21111 11 111112222 66777777766
Q ss_pred CceEEEeCCCCceeeccc-C--------ccCCc-ceEEEEE--CCeEEEEeeCCCcceEEEeCCCCc
Q 017349 244 PRGGVYDINKDTWNLMSD-G--------MKEGW-TGISIVL--EGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 244 ~~i~~yd~~~~~W~~~~~-~--------~~~~~-~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
..+.+||..+..-..... + ..... .-.++.. +++.++.|+. ...+..||..+.+
T Consensus 278 ~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~-D~~v~iwd~~~~~ 343 (393)
T 1erj_A 278 RSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK-DRGVLFWDKKSGN 343 (393)
T ss_dssp SEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEET-TSEEEEEETTTCC
T ss_pred CEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC-CCeEEEEECCCCe
Confidence 578889887543211000 0 00000 0011222 4555566654 5678999988764
No 155
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.85 E-value=0.61 Score=41.34 Aligned_cols=197 Identities=9% Similarity=-0.028 Sum_probs=98.0
Q ss_pred ceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEecc-CCE-EEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCc
Q 017349 91 RIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPR-QGK-LFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTP 168 (373)
Q Consensus 91 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~-i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 168 (373)
...++.+|..+.+...+...+ .......... ++. |++... . ........++++|..++.++.+.. ..+
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~-------~~~~~~~~sp~dg~~l~~~~~-~-~~~~~~~~l~~~d~~~~~~~~l~~-~~~ 236 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT-------AWLGHPIYRPFDDSTVGFCHE-G-PHDLVDARMWLVNEDGSNVRKIKE-HAE 236 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES-------SCEEEEEEETTEEEEEEEEEC-S-CSSSCSCCCEEEETTSCCCEESSC-CCT
T ss_pred cceEEEEECCCCcEEeeccCC-------cccccceECCCCCCEEEEEec-C-CCCCCCceEEEEECCCCceeEeec-cCC
Confidence 456888999888776654222 2233333333 343 444432 1 111122579999998887776654 211
Q ss_pred c-eeeeeeEe-CCe-EEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCEEEEEeCccCC-----
Q 017349 169 R-SFFASGNV-NGK-IMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWP----- 239 (373)
Q Consensus 169 r-~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~----- 239 (373)
. ........ +++ |+... .. .......++++|..+++.+.+..++.. . ....- +|+++++++...+
T Consensus 237 ~~~~~~~~~spdg~~l~~~~-~~--~~~~~~~l~~~d~~~g~~~~l~~~~~~--~-~~~s~~dg~~l~~~~~~~p~~~~~ 310 (396)
T 3c5m_A 237 GESCTHEFWIPDGSAMAYVS-YF--KGQTDRVIYKANPETLENEEVMVMPPC--S-HLMSNFDGSLMVGDGCDAPVDVAD 310 (396)
T ss_dssp TEEEEEEEECTTSSCEEEEE-EE--TTTCCEEEEEECTTTCCEEEEEECCSE--E-EEEECSSSSEEEEEECCC------
T ss_pred CccccceEECCCCCEEEEEe-cC--CCCccceEEEEECCCCCeEEeeeCCCC--C-CCccCCCCceEEEecCCcceeecc
Confidence 1 11122222 444 44443 22 112224599999998887766544321 1 22233 6776666442110
Q ss_pred -----CccCCceEEEeCCCCceeecccCccC----------CcceEEEEECCe-EEEEeeC-CCcceEEEeCCCCceeee
Q 017349 240 -----FMFSPRGGVYDINKDTWNLMSDGMKE----------GWTGISIVLEGK-LFVISEH-GDCPMKQYNPDDDTWRYV 302 (373)
Q Consensus 240 -----~~~~~~i~~yd~~~~~W~~~~~~~~~----------~~~~~~~~~~~~-l~v~gg~-~~~~~~~yd~~~~~W~~~ 302 (373)
......++.+|+.++..+.+...... ........-+++ |+..... +...++.+|..++.++.+
T Consensus 311 ~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 311 ADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp ----CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC---
T ss_pred ccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccccc
Confidence 11235799999998876655431110 011111222454 4444332 245688888888877765
Q ss_pred c
Q 017349 303 G 303 (373)
Q Consensus 303 ~ 303 (373)
.
T Consensus 391 ~ 391 (396)
T 3c5m_A 391 H 391 (396)
T ss_dssp -
T ss_pred c
Confidence 4
No 156
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.82 E-value=0.85 Score=39.80 Aligned_cols=179 Identities=10% Similarity=0.095 Sum_probs=85.5
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCe
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDT 207 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 207 (373)
++..++.|+.+ ..+.+||..+++-..............++. -++.+++.|+.+ ..+.+||..+.+
T Consensus 138 ~~~~l~s~s~d-------g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-------g~i~iwd~~~~~ 203 (343)
T 3lrv_A 138 NTEYFIWADNR-------GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-------GILDVYNLSSPD 203 (343)
T ss_dssp -CCEEEEEETT-------CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-------SCEEEEESSCTT
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-------CEEEEEECCCCC
Confidence 56677777652 268899988876533322221111222222 257777777765 358899998775
Q ss_pred EEeccCCcc-ccccccE-EEE-CCEEEEEeCccCCCccCCceEEEeCCCCcee-ecccC--ccCCcceEEEEE--CCeEE
Q 017349 208 WTTAAKLRM-GLARYDS-AVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWN-LMSDG--MKEGWTGISIVL--EGKLF 279 (373)
Q Consensus 208 W~~~~~~~~-~~~~~~~-~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~-~~~~~--~~~~~~~~~~~~--~~~l~ 279 (373)
-.. ..+.. ....-.. +.. ++..++.|+ + ..+.+||+.+..=. .+... ........++.+ +++.+
T Consensus 204 ~~~-~~~~~~h~~~v~~l~fs~~g~~l~s~~-~------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 275 (343)
T 3lrv_A 204 QAS-SRFPVDEEAKIKEVKFADNGYWMVVEC-D------QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNM 275 (343)
T ss_dssp SCC-EECCCCTTSCEEEEEECTTSSEEEEEE-S------SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEE
T ss_pred CCc-cEEeccCCCCEEEEEEeCCCCEEEEEe-C------CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEE
Confidence 320 11111 1111112 222 566666665 3 37899999876421 11110 001111112333 56777
Q ss_pred EEeeCCCcceEEEeC--CCCceeeecC--CCCCCc-ccccceEEEEeCCEEEEEe
Q 017349 280 VISEHGDCPMKQYNP--DDDTWRYVGG--DKFPCE-VMHRPFAVNGVEGKIYVVS 329 (373)
Q Consensus 280 v~gg~~~~~~~~yd~--~~~~W~~~~~--~~~~~~-~~~~~~~~~~~~~~l~i~G 329 (373)
+.++.+...+.+|+. ..+.|...+. .....+ .......++..++.+.++-
T Consensus 276 ~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 276 IAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp EEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred EEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEEE
Confidence 765432335555554 6678987111 112210 0123344455667666554
No 157
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.82 E-value=0.9 Score=40.02 Aligned_cols=134 Identities=12% Similarity=0.144 Sum_probs=69.2
Q ss_pred eeEEEeCCCCceeccCCCCCcceeeeeeE--e-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEE
Q 017349 148 STIMYRATTNQWQLASPMLTPRSFFASGN--V-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSA 224 (373)
Q Consensus 148 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~ 224 (373)
.+.+||..+++-...-.-.... ...+.. . ++..++.|+.+ ..+.+||..+++.... +........++
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~g~~l~sgs~D-------g~v~~wd~~~~~~~~~--~~~h~~~v~~v 246 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHGAD-VLCLDLAPSETGNTFVSGGCD-------KKAMVWDMRSGQCVQA--FETHESDVNSV 246 (354)
T ss_dssp EEEEEETTTCCEEEEEECCSSC-EEEEEECCCSSCCEEEEEETT-------SCEEEEETTTCCEEEE--ECCCSSCEEEE
T ss_pred cEEEEeCCCCeEEEEEcCCCCC-eEEEEEEeCCCCCEEEEEeCC-------CeEEEEECCCCcEEEE--ecCCCCCeEEE
Confidence 6888898877532211101111 111111 1 34677777765 3588999988764332 11111111122
Q ss_pred EE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEE--ECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 225 VM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIV--LEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 225 ~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
.+ ++.+++.|+.+ ..+..||+.++.-...-..........++. .++++++.|+. ...+.+||..+++
T Consensus 247 ~~~p~~~~l~s~s~D------~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~-d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 247 RYYPSGDAFASGSDD------ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN-DYTINVWDVLKGS 317 (354)
T ss_dssp EECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET-TSCEEEEETTTCS
T ss_pred EEeCCCCEEEEEeCC------CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC-CCcEEEEECCCCc
Confidence 22 56777777766 578899998764322111011111111222 35777777664 6689999986654
No 158
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.82 E-value=0.85 Score=39.70 Aligned_cols=169 Identities=12% Similarity=0.091 Sum_probs=87.2
Q ss_pred ceeEEEeCCCCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCC--eEEeccCC------ccc
Q 017349 147 QSTIMYRATTNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESD--TWTTAAKL------RMG 217 (373)
Q Consensus 147 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~------~~~ 217 (373)
..++++|+.+++.........-.....+++. ++++|+....+ ..+.+||+... .-..+... ...
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~-------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~ 141 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL-------HQVFKLDPHSKEGPLLILGRSMQPGSDQNH 141 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT-------TEEEEECTTCSSCCSEEESBTTBCCCSTTC
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCC-------CEEEEEeCCCCeEEEEEecccCCCCCCccc
Confidence 3689999988765432111111122333333 67799876542 46889998765 22222211 111
Q ss_pred ccccc-EEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCc------cCCc-ceEEEEE--C-CeEEEEeeC
Q 017349 218 LARYD-SAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGM------KEGW-TGISIVL--E-GKLFVISEH 284 (373)
Q Consensus 218 ~~~~~-~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~------~~~~-~~~~~~~--~-~~l~v~gg~ 284 (373)
...+. .++. ++.||+..++. ...|.+||.....-..+...- +... ....+.+ + +.||+....
T Consensus 142 ~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 142 FCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp CSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred cCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 11222 3333 58899987521 157999996544333332100 0111 1122333 4 889988754
Q ss_pred CCcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEEEEEeCC
Q 017349 285 GDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSG 331 (373)
Q Consensus 285 ~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG~ 331 (373)
...+.+||+++++....-..+.. .....+++...+.+|+..|.
T Consensus 217 -~~~I~~~~~~~G~~~~~~~~~~~---~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 217 -NGRIQCFKTDTKEFVREIKHASF---GRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp -TTEEEEEETTTCCEEEEECCTTT---TTCEEEEEEETTEEEEEECC
T ss_pred -CCEEEEEECCCCcEEEEEecccc---CCCcceeeecCCEEEEeCCC
Confidence 66899999986665543211111 12233444444777777664
No 159
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.81 E-value=0.28 Score=42.92 Aligned_cols=190 Identities=6% Similarity=0.014 Sum_probs=92.4
Q ss_pred CEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEecc-CCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 78 PYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPR-QGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 78 ~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
+.+++.|+.+ ..+.+||..+.+-... +... .....+..... ++.+++.|+.+ ..+.+||..+
T Consensus 85 ~~~l~~~~~d----g~i~v~d~~~~~~~~~--~~~~----~~~i~~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR----GIIRIINPITMQCIKH--YVGH----GNAINELKFHPRDPNLLLSVSKD-------HALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT----CEEEEECTTTCCEEEE--EESC----CSCEEEEEECSSCTTEEEEEETT-------SCEEEEETTT
T ss_pred CCEEEEecCC----CEEEEEEchhceEeee--ecCC----CCcEEEEEECCCCCCEEEEEeCC-------CeEEEEEeec
Confidence 3455555432 3577889877654322 1100 02233333333 56677777652 2689999987
Q ss_pred Cceecc-CCCCCc-ceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec-cC-------------------
Q 017349 157 NQWQLA-SPMLTP-RSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTA-AK------------------- 213 (373)
Q Consensus 157 ~~W~~~-~~~~~~-r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~------------------- 213 (373)
++-... ..+... ..-..+... ++..++.|+.+ ..+.+||..+.+-... ..
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-------HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIH 220 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-------SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCC-------CCEEEEECCCCccccccceeEEecCCCCcccccceeec
Confidence 754332 111111 112222222 45666666654 3588898876532110 00
Q ss_pred ---C---ccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCce--eec----------cc--CccCCcceEEEE
Q 017349 214 ---L---RMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTW--NLM----------SD--GMKEGWTGISIV 273 (373)
Q Consensus 214 ---~---~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W--~~~----------~~--~~~~~~~~~~~~ 273 (373)
+ ......-..+...+.+++.++.+ ..+.+||..+..= ..+ .. .........+..
T Consensus 221 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 221 FPDFSTRDIHRNYVDCVRWLGDLILSKSCE------NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp CCSEEECSSCSSCCCEEEEETTEEEEECSS------SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred cCccccccCCcceEEEEEEcCCEEEEEecC------CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence 0 00111111222235666666655 5788888866431 111 00 000011111223
Q ss_pred EC--CeEEEEeeCCCcceEEEeCCCCc
Q 017349 274 LE--GKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 274 ~~--~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
-+ +++++.|+. ...+.+||..+++
T Consensus 295 ~~~~~~~l~~~~~-dg~i~vwd~~~~~ 320 (366)
T 3k26_A 295 MDFWQKMLALGNQ-VGKLYVWDLEVED 320 (366)
T ss_dssp ECTTSSEEEEECT-TSCEEEEECCSSS
T ss_pred CCCCCcEEEEEec-CCcEEEEECCCCC
Confidence 35 777777765 5689999998764
No 160
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.81 E-value=0.82 Score=39.49 Aligned_cols=206 Identities=9% Similarity=0.005 Sum_probs=97.1
Q ss_pred eEEEeeC-CCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCc-------eeccCC
Q 017349 93 QWQALDP-RSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQ-------WQLASP 164 (373)
Q Consensus 93 ~~~~~d~-~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~-------W~~~~~ 164 (373)
.+.+||. .+.....+...+.. ....+..+.. +..++.|+.+ ..+.+||..+.. .+.+..
T Consensus 80 ~i~~wd~~~~~~~~~~~~~~~~-----~~v~~l~~~~-~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~ 146 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTNNEAN-----LGICRICKYG-DDKLIAASWD-------GLIEVIDPRNYGDGVIAVKNLNSNN 146 (342)
T ss_dssp CEEEECSSSSSSEEECBSCCCC-----SCEEEEEEET-TTEEEEEETT-------SEEEEECHHHHTTBCEEEEESCSSS
T ss_pred eEEEEEeccCCceEeccccCCC-----CceEEEEeCC-CCEEEEEcCC-------CeEEEEcccccccccccccCCeeeE
Confidence 4788998 87776555431111 2222333322 5555555542 268888876400 122222
Q ss_pred CCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCC-Ce--EEeccCCccccccccEEEE--CCEEEEEeCccCC
Q 017349 165 MLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPES-DT--WTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWP 239 (373)
Q Consensus 165 ~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t-~~--W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~ 239 (373)
+........+....+. ++.|+.+ ..+.+||..+ .. ...... +....-...+.. ++.+++.|+.+
T Consensus 147 ~~~~~~v~~~~~~~~~-l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d-- 215 (342)
T 1yfq_A 147 TKVKNKIFTMDTNSSR-LIVGMNN-------SQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSID-- 215 (342)
T ss_dssp SSSCCCEEEEEECSSE-EEEEEST-------TEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETT--
T ss_pred EeeCCceEEEEecCCc-EEEEeCC-------CeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecC--
Confidence 2222223334444455 4455443 3688999887 33 221111 111111122333 46677777655
Q ss_pred CccCCceEEEeCCCC------c-eeecccCcc--C----CcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecC
Q 017349 240 FMFSPRGGVYDINKD------T-WNLMSDGMK--E----GWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGG 304 (373)
Q Consensus 240 ~~~~~~i~~yd~~~~------~-W~~~~~~~~--~----~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~ 304 (373)
..+.+||.... . -..+..... . ...-.++.+ ++++++.|+. ...+.+||..+++-...
T Consensus 216 ----g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~~~~~-- 288 (342)
T 1yfq_A 216 ----GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS-DGIISCWNLQTRKKIKN-- 288 (342)
T ss_dssp ----SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET-TSCEEEEETTTTEEEEE--
T ss_pred ----CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC-CceEEEEcCccHhHhhh--
Confidence 45677666544 1 111111000 0 001112233 5666666664 56899999987654322
Q ss_pred CCCCCcccccceEEEEeCCEEEEEeCCc
Q 017349 305 DKFPCEVMHRPFAVNGVEGKIYVVSSGL 332 (373)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~i~GG~~ 332 (373)
+... ....-.++. .++++++.|+..
T Consensus 289 ~~~~--h~~~v~~~~-~~~~~l~s~s~D 313 (342)
T 1yfq_A 289 FAKF--NEDSVVKIA-CSDNILCLATSD 313 (342)
T ss_dssp CCCC--SSSEEEEEE-ECSSEEEEEEEC
T ss_pred hhcc--cCCCceEec-CCCCeEEEEecC
Confidence 1111 002223444 788888888743
No 161
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.80 E-value=0.39 Score=50.22 Aligned_cols=178 Identities=8% Similarity=0.055 Sum_probs=89.7
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.+||..+.+......-. . ....+..+..++..++.|+.+ ..+.+||..++....+... .....
T Consensus 984 ~i~i~d~~~~~~~~~~~~h-~-----~~v~~l~~s~dg~~l~s~~~d-------g~i~vwd~~~~~~~~~~~~--~~~v~ 1048 (1249)
T 3sfz_A 984 AIKIIELPNNRVFSSGVGH-K-----KAVRHIQFTADGKTLISSSED-------SVIQVWNWQTGDYVFLQAH--QETVK 1048 (1249)
T ss_dssp CCEEEETTTTSCEEECCCC-S-----SCCCCEEECSSSSCEEEECSS-------SBEEEEETTTTEEECCBCC--SSCEE
T ss_pred CEEEEEcCCCceeeecccC-C-----CceEEEEECCCCCEEEEEcCC-------CEEEEEECCCCceEEEecC--CCcEE
Confidence 3567777665543321111 0 112223333466777777652 2689999988876544322 12222
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCC
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDIN 252 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~ 252 (373)
.+....+..++.++.+ ..+.+||..+++-...-..........+..-++++++.|+.+ ..+.+||..
T Consensus 1049 ~~~~~~~~~l~~~~~d-------g~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d------~~v~iwd~~ 1115 (1249)
T 3sfz_A 1049 DFRLLQDSRLLSWSFD-------GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSAD------KTAKIWSFD 1115 (1249)
T ss_dssp EEEECSSSEEEEEESS-------SEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCS------SCCCEECSS
T ss_pred EEEEcCCCcEEEEECC-------CcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCC------CcEEEEECC
Confidence 2333333344555554 358899988775322111111111111222366777777765 468888887
Q ss_pred CCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCce
Q 017349 253 KDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 253 ~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W 299 (373)
++.-...-..........+..-++++++.|+. ...+..||..+++-
T Consensus 1116 ~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~-dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1116 LLSPLHELKGHNGCVRCSAFSLDGILLATGDD-NGEIRIWNVSDGQL 1161 (1249)
T ss_dssp SSSCSBCCCCCSSCEEEEEECSSSSEEEEEET-TSCCCEEESSSSCC
T ss_pred CcceeeeeccCCCcEEEEEECCCCCEEEEEeC-CCEEEEEECCCCce
Confidence 76522111101111111112236777777775 55788999876543
No 162
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.80 E-value=0.0032 Score=60.37 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=29.2
Q ss_pred CCCCCCCChHHHHHhhccCC-ccchhhhhhhcHhHHhh
Q 017349 24 QPLIPGLPDEIGELCLLHVP-YPYQALVRSVSYSWNKA 60 (373)
Q Consensus 24 ~~~~~~LP~dl~~~il~rlp-~~~l~~~~~v~k~W~~l 60 (373)
...|..||+|++.+||.+|| .+++.+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 35688999999999999999 89999999999999988
No 163
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.79 E-value=0.79 Score=39.17 Aligned_cols=191 Identities=9% Similarity=0.088 Sum_probs=95.0
Q ss_pred CEEEEEEecCCCCceeEEEeeCCCCCeeeC-CCCCCCCCCCCCceEEEEeccCCEEEEEcCccC--------CCCCCcce
Q 017349 78 PYLFIFSFHKPTARIQWQALDPRSGRWFVL-PPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRS--------DTETPMQS 148 (373)
Q Consensus 78 ~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~--------~~~~~~~~ 148 (373)
+.||+.... ..+.+||+. ++...+ ....... ....-.+.+. ..++.+|+...... ........
T Consensus 83 g~l~v~~~~-----~~l~~~d~~-g~~~~~~~~~~~~~-~~~~~~~i~~-d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~ 154 (314)
T 1pjx_A 83 NQLFVADMR-----LGLLVVQTD-GTFEEIAKKDSEGR-RMQGCNDCAF-DYEGNLWITAPAGEVAPADYTRSMQEKFGS 154 (314)
T ss_dssp SEEEEEETT-----TEEEEEETT-SCEEECCSBCTTSC-BCBCCCEEEE-CTTSCEEEEECBCBCTTSCCCBTTSSSCEE
T ss_pred CcEEEEECC-----CCEEEEeCC-CCEEEEEeccCCCc-cccCCcCEEE-CCCCCEEEEecCcccccccccccccCCCCe
Confidence 677776431 258889998 777655 3322111 0011223333 33778888754310 00112357
Q ss_pred eEEEeCCCCceeccC-CCCCcceeeeeeEe-----CC-eEEEEcCCCCCCCCcCceEEEEeCC-CCeEEe---ccCCccc
Q 017349 149 TIMYRATTNQWQLAS-PMLTPRSFFASGNV-----NG-KIMAVGGTGANINETMTAVECYDPE-SDTWTT---AAKLRMG 217 (373)
Q Consensus 149 ~~~yd~~t~~W~~~~-~~~~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~~~yd~~-t~~W~~---~~~~~~~ 217 (373)
++++|+. ++...+. .+..+ ..++.. ++ .+|+.... ...+.+||+. +++... ...++..
T Consensus 155 l~~~~~~-g~~~~~~~~~~~~---~~i~~~~~~d~dg~~l~v~~~~-------~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 155 IYCFTTD-GQMIQVDTAFQFP---NGIAVRHMNDGRPYQLIVAETP-------TKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp EEEECTT-SCEEEEEEEESSE---EEEEEEECTTSCEEEEEEEETT-------TTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred EEEECCC-CCEEEeccCCCCc---ceEEEecccCCCCCEEEEEECC-------CCeEEEEECCCCCccccceEEEECCCC
Confidence 9999987 5544332 11111 223333 33 57776432 2468888876 444321 1122211
Q ss_pred c-ccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCcee-ecccCccCCcceEEEEE--CCe-EEEEeeCCCcceE
Q 017349 218 L-ARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWN-LMSDGMKEGWTGISIVL--EGK-LFVISEHGDCPMK 290 (373)
Q Consensus 218 ~-~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~-~~~~~~~~~~~~~~~~~--~~~-l~v~gg~~~~~~~ 290 (373)
. ........ +|.+|+..... ..+.+||+++++.. .+.. +... ..++.+ +++ ||+.+. ....++
T Consensus 224 ~~~~p~~i~~d~~G~l~v~~~~~------~~i~~~d~~~g~~~~~~~~--~~~~-~~~i~~~~dg~~l~v~~~-~~~~l~ 293 (314)
T 1pjx_A 224 HEGGADGMDFDEDNNLLVANWGS------SHIEVFGPDGGQPKMRIRC--PFEK-PSNLHFKPQTKTIFVTEH-ENNAVW 293 (314)
T ss_dssp SSCEEEEEEEBTTCCEEEEEETT------TEEEEECTTCBSCSEEEEC--SSSC-EEEEEECTTSSEEEEEET-TTTEEE
T ss_pred CCCCCCceEECCCCCEEEEEcCC------CEEEEEcCCCCcEeEEEeC--CCCC-ceeEEECCCCCEEEEEeC-CCCeEE
Confidence 1 11222222 67888875322 47899999866532 2221 1111 122333 555 776653 356899
Q ss_pred EEeCCCC
Q 017349 291 QYNPDDD 297 (373)
Q Consensus 291 ~yd~~~~ 297 (373)
+|+++..
T Consensus 294 ~~~~~~~ 300 (314)
T 1pjx_A 294 KFEWQRN 300 (314)
T ss_dssp EEECSSC
T ss_pred EEeCCCC
Confidence 9998754
No 164
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.78 E-value=0.31 Score=42.19 Aligned_cols=115 Identities=14% Similarity=0.231 Sum_probs=58.1
Q ss_pred eEEEEcCCCCCCCCcCceEEEEeCCC-CeEEeccCCccccccccEEEE--C----CEEEEEeCccCCCccCCceEEEeCC
Q 017349 180 KIMAVGGTGANINETMTAVECYDPES-DTWTTAAKLRMGLARYDSAVM--G----SKMYVTEGWTWPFMFSPRGGVYDIN 252 (373)
Q Consensus 180 ~iyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~~~~~~~~~~--~----~~lyv~gG~~~~~~~~~~i~~yd~~ 252 (373)
++++.|+.+ ..+.++|..+ +.|+.+..+......-..+.. + +.+++.|+.+ ..+.+||..
T Consensus 180 ~~l~sgs~D-------~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D------~~v~iw~~~ 246 (316)
T 3bg1_A 180 KRFASGGCD-------NLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD------GRVFIWTCD 246 (316)
T ss_dssp CBEECCBTT-------SBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT------CEEEEEECS
T ss_pred ceEEEecCC-------CeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC------CeEEEEEcc
Confidence 455556554 3466777763 457665544432221122222 2 2566677765 578888887
Q ss_pred C---Cceeeccc-CccCCcceEEEEECCeEEEEeeCCCcceEEEeCC-CCceeeecCCCCC
Q 017349 253 K---DTWNLMSD-GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPD-DDTWRYVGGDKFP 308 (373)
Q Consensus 253 ~---~~W~~~~~-~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~-~~~W~~~~~~~~~ 308 (373)
+ +.|..... .........+..-++++++.|+. ...+..|+.. .+.|..+..+..+
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~-D~~v~lw~~~~~g~~~~~~~~~~~ 306 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG-DNKVTLWKESVDGQWVCISDVNKG 306 (316)
T ss_dssp STTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES-SSCEEEEEECTTSCEEEEEECC--
T ss_pred CccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC-CCeEEEEEECCCCcEEEeeeccCC
Confidence 6 34432110 01111111111225667776665 4567777764 4689888755433
No 165
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.78 E-value=1.7 Score=42.76 Aligned_cols=198 Identities=10% Similarity=0.011 Sum_probs=99.5
Q ss_pred CceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCC-------CCCCcceeEEEeCCCCcee--
Q 017349 90 ARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSD-------TETPMQSTIMYRATTNQWQ-- 160 (373)
Q Consensus 90 ~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~-------~~~~~~~~~~yd~~t~~W~-- 160 (373)
....++++|..+++.... .++ . ..+.....+.++.|+... .... .......+++++..+..-.
T Consensus 187 e~~~i~v~dl~tg~~~~~-~~~--~----~~~~~~~wspD~~l~~~~-~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~ 258 (741)
T 1yr2_A 187 DWRTVKFVGVADGKPLAD-ELK--W----VKFSGLAWLGNDALLYSR-FAEPKEGQAFQALNYNQTVWLHRLGTPQSADQ 258 (741)
T ss_dssp SEEEEEEEETTTCCEEEE-EEE--E----EESCCCEESTTSEEEEEE-CCCC--------CCCCCEEEEEETTSCGGGCE
T ss_pred ceEEEEEEECCCCCCCCc-cCC--C----ceeccEEEECCCEEEEEE-ecCcccccccccCCCCCEEEEEECCCCchhCE
Confidence 345788999998887543 111 0 111122233344444432 2111 0012346888998776532
Q ss_pred ccCCCC-Ccceeeeee-EeCCeEEEEcCCCCCCCCcCceEEEEeCCCC--e-EEeccCCccccccccEEEECCEEEEEeC
Q 017349 161 LASPML-TPRSFFASG-NVNGKIMAVGGTGANINETMTAVECYDPESD--T-WTTAAKLRMGLARYDSAVMGSKMYVTEG 235 (373)
Q Consensus 161 ~~~~~~-~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~--~-W~~~~~~~~~~~~~~~~~~~~~lyv~gG 235 (373)
.+...+ .+....... .-+++..++.... .....+.++++|..+. . |+.+..-...... .....++.||+...
T Consensus 259 lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~--~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~dg~~l~~~s~ 335 (741)
T 1yr2_A 259 PVFATPELPKRGHGASVSSDGRWVVITSSE--GTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD-FVDGVGDQLWFVSG 335 (741)
T ss_dssp EEECCTTCTTCEEEEEECTTSCEEEEEEEC--TTCSCCEEEEEEEETTEECCCEEEECSSSSCEE-EEEEETTEEEEEEC
T ss_pred EEeccCCCCeEEEEEEECCCCCEEEEEEEc--cCCCcceEEEEECCCCCCcccEEecCCCCceEE-EEeccCCEEEEEEC
Confidence 121111 112222222 2245444443332 2123568999999877 6 7777532222211 12234667777754
Q ss_pred ccCCCccCCceEEEeCCC--CceeecccCccCCcceEEEEECCeEEEEeeCC-CcceEEEeCCCCceeee
Q 017349 236 WTWPFMFSPRGGVYDINK--DTWNLMSDGMKEGWTGISIVLEGKLFVISEHG-DCPMKQYNPDDDTWRYV 302 (373)
Q Consensus 236 ~~~~~~~~~~i~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~-~~~~~~yd~~~~~W~~~ 302 (373)
.. .....++.+|..+ ..|+.+-... ..........+++|++....+ ...++.+|...+.-..+
T Consensus 336 ~~---~~~~~l~~~d~~~~~~~~~~l~~~~-~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 336 DG---APLKKIVRVDLSGSTPRFDTVVPES-KDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp TT---CTTCEEEEEECSSSSCEEEEEECCC-SSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEEC
T ss_pred CC---CCCCEEEEEeCCCCccccEEEecCC-CCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeec
Confidence 32 2235799999988 5788765322 111222234488888776543 45788888765433333
No 166
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.74 E-value=0.91 Score=39.48 Aligned_cols=202 Identities=9% Similarity=0.025 Sum_probs=96.9
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEe--ccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSL--PRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS 170 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 170 (373)
.+.+||..+.+...+.... ....+... ..++.+++.|+.+ ..+.+||..+++-... +..+..
T Consensus 109 ~v~iwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~--~~~~~~ 172 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHD-------APVKTIHWIKAPNYSCVMTGSWD-------KTLKFWDTRSSNPMMV--LQLPER 172 (368)
T ss_dssp EEEEEETTTTEEEEEEECS-------SCEEEEEEEECSSCEEEEEEETT-------SEEEEECSSCSSCSEE--EECSSC
T ss_pred cEEEEEcCCCCceeecccc-------CceEEEEEEeCCCCCEEEEccCC-------CcEEEEECCCCcEEEE--EecCCC
Confidence 5778888877655432211 22223332 3467777777652 2689999887643221 111222
Q ss_pred eeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCccccccccEEEECC----EEEEEeCccCCCccCC
Q 017349 171 FFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRMGLARYDSAVMGS----KMYVTEGWTWPFMFSP 244 (373)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~----~lyv~gG~~~~~~~~~ 244 (373)
..........+++.++. ..+.+||..... +..+...............+. ..++.|+.+ .
T Consensus 173 ~~~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------g 238 (368)
T 3mmy_A 173 CYCADVIYPMAVVATAE--------RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE------G 238 (368)
T ss_dssp EEEEEEETTEEEEEEGG--------GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT------S
T ss_pred ceEEEecCCeeEEEeCC--------CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC------C
Confidence 23333345544444332 247788876653 333332221111111222222 235556554 5
Q ss_pred ceEEEeCCCCce-eecccCccCCc-------------ceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCC
Q 017349 245 RGGVYDINKDTW-NLMSDGMKEGW-------------TGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFP 308 (373)
Q Consensus 245 ~i~~yd~~~~~W-~~~~~~~~~~~-------------~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~ 308 (373)
.+.+||..+..- ..+.. ..... .-.++.+ ++++++.|+. ...+..||..+.+-.. .+...
T Consensus 239 ~i~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-dg~i~iwd~~~~~~~~--~~~~~ 314 (368)
T 3mmy_A 239 RVAIHYINPPNPAKDNFT-FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGS-DGRFSFWDKDARTKLK--TSEQL 314 (368)
T ss_dssp EEEEEESSCSCHHHHSEE-EECSEEC----CCCEEECCEEEEEECTTTCCEEEEET-TSCEEEEETTTTEEEE--ECCCC
T ss_pred cEEEEecCCCCcccccee-eeeeecccccccccccccceEEEEEecCCCEEEEEcc-CCeEEEEECCCCcEEE--EecCC
Confidence 788888876632 11100 00000 0111222 5666666665 5689999998654332 22211
Q ss_pred CcccccceEE-EEeCCEEEEEeCC
Q 017349 309 CEVMHRPFAV-NGVEGKIYVVSSG 331 (373)
Q Consensus 309 ~~~~~~~~~~-~~~~~~l~i~GG~ 331 (373)
. ....++ ...+++.++.|+.
T Consensus 315 --~-~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 315 --D-QPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp --S-SCEEEEEECTTSSCEEEEEC
T ss_pred --C-CCceEEEECCCCCeEEEEec
Confidence 0 112222 2346777777764
No 167
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.71 E-value=0.16 Score=46.31 Aligned_cols=146 Identities=9% Similarity=-0.043 Sum_probs=78.5
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCC-CCcceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPM-LTPRSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPES 205 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t 205 (373)
++.+++.|+.++ .+.+||..++.-..+-.+ .....-.++.. .++.+++.|+.+ ..+.++|..+
T Consensus 131 ~~~~lasGs~dg-------~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-------~~v~iwd~~~ 196 (435)
T 4e54_B 131 HPSTVAVGSKGG-------DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-------GTTRLQDFKG 196 (435)
T ss_dssp CTTCEEEEETTS-------CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-------SCEEEEETTS
T ss_pred CCCEEEEEeCCC-------EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-------CEEEEeeccC
Confidence 456777776532 588888877754332222 11222223333 245666667665 3588899988
Q ss_pred CeEEeccCCcccc-ccccEEE-ECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--C-CeEEE
Q 017349 206 DTWTTAAKLRMGL-ARYDSAV-MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--E-GKLFV 280 (373)
Q Consensus 206 ~~W~~~~~~~~~~-~~~~~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~-~~l~v 280 (373)
+..+.+....... ...+... -++.+++.|+.+ ..+..||.....-..+.. . .... .++.+ + +.+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~~~~~~~-h-~~~v-~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 197 NILRVFASSDTINIWFCSLDVSASSRMVVTGDNV------GNVILLNMDGKELWNLRM-H-KKKV-THVALNPCCDWFLA 267 (435)
T ss_dssp CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS------SBEEEEESSSCBCCCSBC-C-SSCE-EEEEECTTCSSEEE
T ss_pred CceeEEeccCCCCccEEEEEECCCCCEEEEEeCC------CcEeeeccCcceeEEEec-c-cceE-EeeeecCCCceEEE
Confidence 8765543222211 1122333 367788888766 578899987654322211 1 1111 12333 3 34666
Q ss_pred EeeCCCcceEEEeCCCCc
Q 017349 281 ISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 281 ~gg~~~~~~~~yd~~~~~ 298 (373)
.|+. ...+.+||..+.+
T Consensus 268 s~s~-d~~v~iwd~~~~~ 284 (435)
T 4e54_B 268 TASV-DQTVKIWDLRQVR 284 (435)
T ss_dssp EEET-TSBCCEEETTTCC
T ss_pred EecC-cceeeEEeccccc
Confidence 6664 5678889886543
No 168
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.70 E-value=0.52 Score=41.59 Aligned_cols=155 Identities=13% Similarity=0.103 Sum_probs=75.4
Q ss_pred eccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCC
Q 017349 126 LPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPES 205 (373)
Q Consensus 126 ~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t 205 (373)
...++..++.|+.+ + .+.+||..+..-...-..+..........-++..++.||.+ ..+.+|+...
T Consensus 72 ~s~d~~~l~s~s~D--g-----~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d-------~~i~v~~~~~ 137 (354)
T 2pbi_B 72 WCKDKRRIVSSSQD--G-----KVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD-------NKCSVYPLTF 137 (354)
T ss_dssp ECTTSSEEEEEETT--S-----EEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT-------SEEEEEECCC
T ss_pred ECCCCCEEEEEeCC--C-----eEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC-------CCEEEEEEec
Confidence 33356667777652 2 68888877765433222221111111112256777778775 3567777654
Q ss_pred CeEEecc----CCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CCe
Q 017349 206 DTWTTAA----KLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGK 277 (373)
Q Consensus 206 ~~W~~~~----~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~ 277 (373)
+.-.... .+.........+.. ++..++.|+.+ ..+..||+.+++-...-.............. +++
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D------~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD------GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT------SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred cccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC------CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 3211110 01111111112222 44455555554 5788999988764321110111111111111 356
Q ss_pred EEEEeeCCCcceEEEeCCCCceee
Q 017349 278 LFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 278 l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
+++.|+. ...+..||..+++...
T Consensus 212 ~l~sgs~-Dg~v~~wd~~~~~~~~ 234 (354)
T 2pbi_B 212 TFVSGGC-DKKAMVWDMRSGQCVQ 234 (354)
T ss_dssp EEEEEET-TSCEEEEETTTCCEEE
T ss_pred EEEEEeC-CCeEEEEECCCCcEEE
Confidence 7777765 5689999998776543
No 169
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.70 E-value=0.53 Score=42.57 Aligned_cols=134 Identities=14% Similarity=0.198 Sum_probs=73.8
Q ss_pred eeEEEeCCCCceeccCCCCCcceee-eeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEE
Q 017349 148 STIMYRATTNQWQLASPMLTPRSFF-ASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAV 225 (373)
Q Consensus 148 ~~~~yd~~t~~W~~~~~~~~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~ 225 (373)
.+++||..+++-.++-.+....... +++.. +++.++.|+.+ ..+.+||..+++-... +........+..
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-------g~v~iWd~~~~~~~~~--~~~h~~~v~~~s 196 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKRLRN--MTSHSARVGSLS 196 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEE--ECCCSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-------CeEEEEEcCCCcEEEE--EeCCCCceEEEe
Confidence 7999999998766554443322222 22222 56777777765 3588999988764222 222222233445
Q ss_pred ECCEEEEEeCccCCCccCCceEEEeCCCCceeeccc-CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCC
Q 017349 226 MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 226 ~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
.++.+.+.|+.+ ..+..+|........... ............-+++.++.++. .+.+.++|..++
T Consensus 197 ~~~~~l~sgs~d------~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~-D~~v~i~~~~~~ 262 (420)
T 4gga_A 197 WNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN-DNLVNVWPSAPG 262 (420)
T ss_dssp EETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET-TSCEEEEESSCC
T ss_pred eCCCEEEEEeCC------CceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeec-cccceEEeeccc
Confidence 577777777765 567788876654322111 01111111112235666666654 557777877654
No 170
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.68 E-value=0.49 Score=41.17 Aligned_cols=190 Identities=8% Similarity=0.066 Sum_probs=94.7
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccC---CEEEEEcCccCCCCCCcceeEEEe
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQ---GKLFVLGGMRSDTETPMQSTIMYR 153 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~v~GG~~~~~~~~~~~~~~yd 153 (373)
+..+++.|+. ......+.+||..+++.......... ....+.....+ +.+++.|+.+ ..+.+||
T Consensus 30 ~~~l~~~~s~-~~~d~~v~iw~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd 96 (357)
T 3i2n_A 30 SAKFVTMGNF-ARGTGVIQLYEIQHGDLKLLREIEKA-----KPIKCGTFGATSLQQRYLATGDFG-------GNLHIWN 96 (357)
T ss_dssp SSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEES-----SCEEEEECTTCCTTTCCEEEEETT-------SCEEEEC
T ss_pred CceEEEecCc-cCCCcEEEEEeCCCCcccceeeeccc-----CcEEEEEEcCCCCCCceEEEecCC-------CeEEEEe
Confidence 4456655532 11245578888888776544322211 12333333333 4677776652 2688899
Q ss_pred CCCCc--eeccCCCCCcceeeeee-------EeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCccc--ccc
Q 017349 154 ATTNQ--WQLASPMLTPRSFFASG-------NVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRMG--LAR 220 (373)
Q Consensus 154 ~~t~~--W~~~~~~~~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--~~~ 220 (373)
..+++ -..+.... ..-..+. .-++..++.|+.+ ..+.+||..+.. ...+...... ..-
T Consensus 97 ~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~s~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 97 LEAPEMPVYSVKGHK--EIINAIDGIGGLGIGEGAPEIVTGSRD-------GTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp TTSCSSCSEEECCCS--SCEEEEEEESGGGCC-CCCEEEEEETT-------SCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred CCCCCccEEEEEecc--cceEEEeeccccccCCCccEEEEEeCC-------CeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 88765 11121111 1111111 1245566666654 358889988764 2333221111 111
Q ss_pred ccEE-----EECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE----CCeEEEEeeCCCcceEE
Q 017349 221 YDSA-----VMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL----EGKLFVISEHGDCPMKQ 291 (373)
Q Consensus 221 ~~~~-----~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~----~~~l~v~gg~~~~~~~~ 291 (373)
.+.+ .-++.+++.|+.+ ..+..||..+.+-..... ..... ...... ++..++.|+. ...+..
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~-~~~~v-~~~~~~~~~~~~~~l~~~~~-dg~i~i 238 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCAGYDN------GDIKLFDLRNMALRWETN-IKNGV-CSLEFDRKDISMNKLVATSL-EGKFHV 238 (357)
T ss_dssp EEEEEECCCC-CCCEEEEEETT------SEEEEEETTTTEEEEEEE-CSSCE-EEEEESCSSSSCCEEEEEES-TTEEEE
T ss_pred EEEEEEeccCCCCCEEEEEccC------CeEEEEECccCceeeecC-CCCce-EEEEcCCCCCCCCEEEEECC-CCeEEE
Confidence 1122 1367777777655 578999998876422211 11111 111222 5666666664 567888
Q ss_pred EeCCCC
Q 017349 292 YNPDDD 297 (373)
Q Consensus 292 yd~~~~ 297 (373)
||..+.
T Consensus 239 ~d~~~~ 244 (357)
T 3i2n_A 239 FDMRTQ 244 (357)
T ss_dssp EEEEEE
T ss_pred EeCcCC
Confidence 887643
No 171
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.60 E-value=1.3 Score=43.16 Aligned_cols=104 Identities=5% Similarity=-0.056 Sum_probs=52.4
Q ss_pred eEEEEeCCC-CeEEeccCCc-c-ccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCc----ce
Q 017349 197 AVECYDPES-DTWTTAAKLR-M-GLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGW----TG 269 (373)
Q Consensus 197 ~~~~yd~~t-~~W~~~~~~~-~-~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~----~~ 269 (373)
.++++|..+ ++-+.+.... . ......+. -+|+..+++..+. ......++.+|+.+++...+.......+ ..
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~-~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~ 341 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSR-DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNS 341 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEET-TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecc-cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCc
Confidence 788889888 7654443211 1 11111223 4555444433221 1223578999999887765432111111 11
Q ss_pred EEEEECCeEEEEeeCC-CcceEEEeCCCCceeeec
Q 017349 270 ISIVLEGKLFVISEHG-DCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 270 ~~~~~~~~l~v~gg~~-~~~~~~yd~~~~~W~~~~ 303 (373)
.+..-+|++++.++.+ ...++.+|...+ ...+.
T Consensus 342 ~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 342 LRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred eEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 2223367766665443 357888887655 55543
No 172
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.57 E-value=0.98 Score=38.69 Aligned_cols=175 Identities=7% Similarity=0.037 Sum_probs=84.7
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCC-Cccee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPML-TPRSF 171 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~ 171 (373)
.+.++|..+..-... +.... ....+..+..++..++.|+.+ ..+.+||..+++-... +. ....-
T Consensus 36 ~v~lWd~~~~~~~~~--~~~~~----~~v~~~~~~~~~~~l~s~s~d-------~~i~vwd~~~~~~~~~--~~~h~~~v 100 (304)
T 2ynn_A 36 RVELWNYETQVEVRS--IQVTE----TPVRAGKFIARKNWIIVGSDD-------FRIRVFNYNTGEKVVD--FEAHPDYI 100 (304)
T ss_dssp EEEEEETTTTEEEEE--EECCS----SCEEEEEEEGGGTEEEEEETT-------SEEEEEETTTCCEEEE--EECCSSCE
T ss_pred cEEEEECCCCceeEE--eeccC----CcEEEEEEeCCCCEEEEECCC-------CEEEEEECCCCcEEEE--EeCCCCcE
Confidence 477788877643221 11111 122333333366666676652 2688999887753211 11 11111
Q ss_pred eeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccc-ccEEEE--CCEEEEEeCccCCCccCCceE
Q 017349 172 FASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLAR-YDSAVM--GSKMYVTEGWTWPFMFSPRGG 247 (373)
Q Consensus 172 ~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~-~~~~~~--~~~lyv~gG~~~~~~~~~~i~ 247 (373)
..++.. ++.+++.|+.+ ..+.+||..++. .....+...... .+.+.. ++.+++.|+.+ ..+.
T Consensus 101 ~~~~~~~~~~~l~sgs~D-------~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D------~~v~ 166 (304)
T 2ynn_A 101 RSIAVHPTKPYVLSGSDD-------LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD------RTVK 166 (304)
T ss_dssp EEEEECSSSSEEEEEETT-------SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETT------SEEE
T ss_pred EEEEEcCCCCEEEEECCC-------CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCC------CeEE
Confidence 222222 45666666664 357788876652 111111111111 112222 45677777766 5788
Q ss_pred EEeCCCCceeecccCccCCcceEEEEE----CCeEEEEeeCCCcceEEEeCCCCc
Q 017349 248 VYDINKDTWNLMSDGMKEGWTGISIVL----EGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 248 ~yd~~~~~W~~~~~~~~~~~~~~~~~~----~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
+||..+..=...-........ ..+.+ ++.+++.|+. ...+..||..+.+
T Consensus 167 iwd~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~l~s~s~-D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 167 VWSLGQSTPNFTLTTGQERGV-NYVDYYPLPDKPYMITASD-DLTIKIWDYQTKS 219 (304)
T ss_dssp EEETTCSSCSEEEECCCTTCE-EEEEECCSTTCCEEEEEET-TSEEEEEETTTTE
T ss_pred EEECCCCCccceeccCCcCcE-EEEEEEEcCCCCEEEEEcC-CCeEEEEeCCCCc
Confidence 999865432111000011111 11222 4556666654 6789999998764
No 173
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.57 E-value=0.88 Score=38.14 Aligned_cols=191 Identities=6% Similarity=-0.067 Sum_probs=103.9
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+... ....+.+||+....-..+.... ...-.+.++...++.||+.... .+.+.++|+..
T Consensus 47 ~~~ly~~d~----~~~~I~~~~~~g~~~~~~~~~~-----~~~p~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~g 110 (267)
T 1npe_A 47 DKVVYWTDI----SEPSIGRASLHGGEPTTIIRQD-----LGSPEGIALDHLGRTIFWTDSQ-------LDRIEVAKMDG 110 (267)
T ss_dssp TTEEEEEET----TTTEEEEEESSSCCCEEEECTT-----CCCEEEEEEETTTTEEEEEETT-------TTEEEEEETTS
T ss_pred CCEEEEEEC----CCCEEEEEecCCCCcEEEEECC-----CCCccEEEEEecCCeEEEEECC-------CCEEEEEEcCC
Confidence 567887642 3456888998766433332111 0123455554446899998542 34789999875
Q ss_pred CceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccccc-EEEE--CCEEE
Q 017349 157 NQWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYD-SAVM--GSKMY 231 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~-~~~~--~~~ly 231 (373)
..-+.+......+ ...++.. +++||+..... ....++++++....-+.+.... ...+. .++. ++.||
T Consensus 111 ~~~~~~~~~~~~~-P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~dg~~~~~~~~~~--~~~P~gia~d~~~~~ly 182 (267)
T 1npe_A 111 TQRRVLFDTGLVN-PRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMDGTNRRILAQDN--LGLPNGLTFDAFSSQLC 182 (267)
T ss_dssp CSCEEEECSSCSS-EEEEEEETTTTEEEEEECCS-----SSCEEEEEETTSCCCEEEECTT--CSCEEEEEEETTTTEEE
T ss_pred CCEEEEEECCCCC-ccEEEEeeCCCEEEEEECCC-----CCcEEEEEecCCCCcEEEEECC--CCCCcEEEEcCCCCEEE
Confidence 5433322111111 2233443 68899875321 1346888887654333332111 11222 3333 46899
Q ss_pred EEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 232 VTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 232 v~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
+.-... +.|.++|+....-..+......+ .+. +.-++.||+.... ...+.++|+++++-.
T Consensus 183 v~d~~~------~~I~~~~~~g~~~~~~~~~~~~P-~gi-~~d~~~lyva~~~-~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 183 WVDAGT------HRAECLNPAQPGRRKVLEGLQYP-FAV-TSYGKNLYYTDWK-TNSVIAMDLAISKEM 242 (267)
T ss_dssp EEETTT------TEEEEEETTEEEEEEEEECCCSE-EEE-EEETTEEEEEETT-TTEEEEEETTTTEEE
T ss_pred EEECCC------CEEEEEecCCCceEEEecCCCCc-eEE-EEeCCEEEEEECC-CCeEEEEeCCCCCce
Confidence 886443 68999999764322221111111 122 4458899997643 568999999876544
No 174
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=95.56 E-value=0.48 Score=41.37 Aligned_cols=104 Identities=13% Similarity=0.057 Sum_probs=57.8
Q ss_pred CEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCC-CcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 130 GKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPML-TPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 130 ~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
+.+++.|+.+ ..+.+||..+++-... +. ....-..+... ++.+++.|+.+ ..+.+||..++
T Consensus 85 ~~~l~~~~~d-------g~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~ 148 (366)
T 3k26_A 85 HPLLAVAGSR-------GIIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKD-------HALRLWNIQTD 148 (366)
T ss_dssp CEEEEEEETT-------CEEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETT-------SCEEEEETTTT
T ss_pred CCEEEEecCC-------CEEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCC-------CeEEEEEeecC
Confidence 5677777752 2688999887643221 11 11111222222 56677777764 35889999887
Q ss_pred eEEec-cCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCc
Q 017349 207 TWTTA-AKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDT 255 (373)
Q Consensus 207 ~W~~~-~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~ 255 (373)
+-... ..+.........+.. ++..++.|+.+ ..+.+||..+++
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~ 194 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD------HSLKLWRINSKR 194 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETT------SCEEEEESCSHH
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCC------CCEEEEECCCCc
Confidence 64332 211222121222222 56667777665 578999998764
No 175
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.56 E-value=1.7 Score=41.33 Aligned_cols=115 Identities=10% Similarity=0.163 Sum_probs=69.1
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeC-CCC--ceeccCCCCCc--------ceeeeeeEeCCeEEEEcCCCCCCCCcCce
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRA-TTN--QWQLASPMLTP--------RSFFASGNVNGKIMAVGGTGANINETMTA 197 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~-~t~--~W~~~~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 197 (373)
++.||+.... ...++.+|. .++ .|+.-...... ....+.+..+++||+.... ..
T Consensus 62 ~g~vyv~~~~-------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d--------g~ 126 (571)
T 2ad6_A 62 GDMMYVHSAF-------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN--------GH 126 (571)
T ss_dssp TTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT--------SE
T ss_pred CCEEEEEeCC-------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC--------CE
Confidence 8999998542 236999999 777 48764332111 1123456678899886432 35
Q ss_pred EEEEeCCCCe--EEec-cCCccc-cccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCc--eeec
Q 017349 198 VECYDPESDT--WTTA-AKLRMG-LARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLM 259 (373)
Q Consensus 198 ~~~yd~~t~~--W~~~-~~~~~~-~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~ 259 (373)
++.+|..|++ |+.- ...+.. ....+.++.++++|+..+.. .......+++||.++++ |+.-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~-~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGA-ELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCG-GGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCC-ccCCCCEEEEEECCCCcEEEEEc
Confidence 8999998874 8753 221111 11223455689988765321 11112579999998875 8643
No 176
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.51 E-value=0.51 Score=43.33 Aligned_cols=171 Identities=14% Similarity=0.132 Sum_probs=91.7
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe-
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT- 207 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~- 207 (373)
++++|+|-|. ..|+||..+++.....-...+. .-++....+++|++-|.. .+.||+.+++
T Consensus 158 ~~~~yfFkG~---------~yw~yd~~~~~~~~~~w~gi~~-iDAA~~~~g~~YfFkG~~---------y~rfd~~~~~v 218 (460)
T 1qhu_A 158 DEGILFFQGN---------RKWFWDLTTGTKKERSWPAVGN-CTSALRWLGRYYCFQGNQ---------FLRFNPVSGEV 218 (460)
T ss_dssp SSEEEEEETT---------EEEEEETTTTEEEEECCTTSCC-CSEEEEETTEEEEEETTE---------EEEECTTTCCC
T ss_pred CCeEEEEecc---------cEEEEecccceeecccCCCCCc-cchheeeCCceEEEECCE---------EEEEcCccCcc
Confidence 6788888764 6899999877543211011122 234444578999998864 7788876543
Q ss_pred -----------EEeccCCc------------------cccccccEEE--ECCEEEEEeCccCCCccCCceEEEeCCCCce
Q 017349 208 -----------WTTAAKLR------------------MGLARYDSAV--MGSKMYVTEGWTWPFMFSPRGGVYDINKDTW 256 (373)
Q Consensus 208 -----------W~~~~~~~------------------~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W 256 (373)
|.-++... .+....-++. .+|++|++-|. ..+++|.....+
T Consensus 219 ~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~--------~yWR~~~~~~~~ 290 (460)
T 1qhu_A 219 PPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS--------HYWRLDTNRDGW 290 (460)
T ss_dssp CTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT--------EEEECTTGGGCC
T ss_pred cCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC--------EEEEEecCCCCc
Confidence 21111100 0011122333 36899999773 456666554333
Q ss_pred ee--ccc---CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeecC--------CCCCCc--ccccceEEEE-
Q 017349 257 NL--MSD---GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVGG--------DKFPCE--VMHRPFAVNG- 320 (373)
Q Consensus 257 ~~--~~~---~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~--------~~~~~~--~~~~~~~~~~- 320 (373)
.. +.. .+|.. ..++...++++|++-|. .+|+|+..++ .+.+.. +.+|.. ...-.+++..
T Consensus 291 ~p~~Is~~WpglP~~-IDAAf~~~~~~yfFkG~---~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~~~ 365 (460)
T 1qhu_A 291 HSWPIAHQWPQGPST-VDAAFSWEDKLYLIQDT---KVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCP 365 (460)
T ss_dssp CCEEGGGTCTTSCSS-CSEEEEETTEEEEEETT---EEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCT
T ss_pred CccchhhhccCCCCC-CcEEEEECCeEEEEeCC---EEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEEeC
Confidence 21 111 12222 33444568999999765 7899986531 222211 334421 1123344432
Q ss_pred eCCEEEEEeCC
Q 017349 321 VEGKIYVVSSG 331 (373)
Q Consensus 321 ~~~~l~i~GG~ 331 (373)
.++++|+|-|.
T Consensus 366 ~~~ktyfFkG~ 376 (460)
T 1qhu_A 366 GSSRLHIMAGR 376 (460)
T ss_dssp TCCEEEEEETT
T ss_pred CCCEEEEEECC
Confidence 46899999884
No 177
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.49 E-value=2.2 Score=42.25 Aligned_cols=152 Identities=9% Similarity=-0.044 Sum_probs=87.9
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccC--CCCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCc
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLAS--PMLTPRSFFASGN--VNGKIMAVGGTGANINETMT 196 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 196 (373)
.+.++...++.||+.-.. ...++++++....-+.+. .+..| .++++ .++.||+.--. ...
T Consensus 474 ~GLAvD~~~~~LY~tD~~-------~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g------~~~ 537 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG------TPA 537 (791)
T ss_dssp CEEEEETTTTEEEEEETT-------TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS------SSC
T ss_pred ceeeeeecCCcEEEEecC-------CCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecCC------CCC
Confidence 466666558899998432 347999998866544442 22222 24444 36889987411 124
Q ss_pred eEEEEeCCCCeEEeccCCcccccccc-EEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeeccc-CccCCcceEEE
Q 017349 197 AVECYDPESDTWTTAAKLRMGLARYD-SAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGISI 272 (373)
Q Consensus 197 ~~~~yd~~t~~W~~~~~~~~~~~~~~-~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~ 272 (373)
.++++++....-+.+.. .....+. .++- +++||+.-... ..|+++|+....=+.+.. ......-...+
T Consensus 538 ~I~~~~~dG~~~~~lv~--~~l~~P~GLavD~~~~~LYwaD~~~------~~I~~~d~dG~~~~~v~~~~~~l~~P~gla 609 (791)
T 3m0c_C 538 KIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKL------HSISSIDVNGGNRKTILEDEKRLAHPFSLA 609 (791)
T ss_dssp EEEEEETTSCCEEEEEC--SSCSCEEEEEEETTTTEEEEEETTT------TEEEEEETTSCSCEEEEECTTTTSSEEEEE
T ss_pred eEEEEecCCCceEEEEe--CCCCCceEEEEecCCCeEEEEeCCC------CcEEEEecCCCceEEEecCCCccCCCCEEE
Confidence 68899887654443321 1112222 3333 68999985432 689999986543322221 11111111225
Q ss_pred EECCeEEEEeeCCCcceEEEeCCCC
Q 017349 273 VLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 273 ~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
+.+++||+.... ...|+++|..++
T Consensus 610 v~~~~lYwtD~~-~~~I~~~dk~tG 633 (791)
T 3m0c_C 610 VFEDKVFWTDII-NEAIFSANRLTG 633 (791)
T ss_dssp EETTEEEEEETT-TTEEEEEETTTC
T ss_pred EeCCEEEEEECC-CCEEEEEeCCCC
Confidence 689999998743 678888886554
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.43 E-value=1.1 Score=38.19 Aligned_cols=195 Identities=12% Similarity=0.062 Sum_probs=100.7
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+.+.. ...++.||+.+. ...+.... . ...+.+ +..++.+|+.... ...+++||+.+
T Consensus 39 g~~l~~~~~~----~~~i~~~~~~~~-~~~~~~~~-~-----~~~~l~-~~~dg~l~v~~~~-------~~~i~~~d~~~ 99 (296)
T 3e5z_A 39 RSAVIFSDVR----QNRTWAWSDDGQ-LSPEMHPS-H-----HQNGHC-LNKQGHLIACSHG-------LRRLERQREPG 99 (296)
T ss_dssp GTEEEEEEGG----GTEEEEEETTSC-EEEEESSC-S-----SEEEEE-ECTTCCEEEEETT-------TTEEEEECSTT
T ss_pred CCEEEEEeCC----CCEEEEEECCCC-eEEEECCC-C-----Ccceee-ECCCCcEEEEecC-------CCeEEEEcCCC
Confidence 3446666532 335888999887 55543211 1 123333 3347788876432 23799999988
Q ss_pred CceeccCCCCCc----ceeeeeeEeCCeEEEE----cCCC------CCCCCcCceEEEEeCCCCeEEecc-CCccccccc
Q 017349 157 NQWQLASPMLTP----RSFFASGNVNGKIMAV----GGTG------ANINETMTAVECYDPESDTWTTAA-KLRMGLARY 221 (373)
Q Consensus 157 ~~W~~~~~~~~~----r~~~~~~~~~~~iyv~----GG~~------~~~~~~~~~~~~yd~~t~~W~~~~-~~~~~~~~~ 221 (373)
++.+.+...... +....+..-++++|+. |... .........++.||+. ++.+.+. .+..+ .
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~ 175 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP---N 175 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE---E
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC---c
Confidence 887655322111 1111222236788886 3210 0011123478899887 5544432 11111 1
Q ss_pred cEEEE-CCEEEEEeCccCCCccCCceEEEeCC-CCce-eeccc-CccCC-cceEEEEECCeEEEEeeCCCcceEEEeCCC
Q 017349 222 DSAVM-GSKMYVTEGWTWPFMFSPRGGVYDIN-KDTW-NLMSD-GMKEG-WTGISIVLEGKLFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 222 ~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~-~~~W-~~~~~-~~~~~-~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~ 296 (373)
..+.. ++++++..... ..+++||+. +++. ..... ..... -.+.+.--+|+||+.. ...+.+||++.
T Consensus 176 gi~~s~dg~~lv~~~~~------~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~---~~~v~~~~~~g 246 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGD------NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA---GDGVHVLTPDG 246 (296)
T ss_dssp EEEECTTSCEEEEETTT------TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE---TTEEEEECTTS
T ss_pred cEEECCCCCEEEEeCCC------CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc---CCeEEEECCCC
Confidence 22222 56666444332 578999986 4554 11111 01111 1122233478898877 34899999986
Q ss_pred Cceeeec
Q 017349 297 DTWRYVG 303 (373)
Q Consensus 297 ~~W~~~~ 303 (373)
+....+.
T Consensus 247 ~~~~~~~ 253 (296)
T 3e5z_A 247 DELGRVL 253 (296)
T ss_dssp CEEEEEE
T ss_pred CEEEEEE
Confidence 5544443
No 179
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.43 E-value=2 Score=41.35 Aligned_cols=202 Identities=10% Similarity=0.047 Sum_probs=117.0
Q ss_pred ceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce
Q 017349 91 RIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS 170 (373)
Q Consensus 91 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 170 (373)
..++...|+.+..-....+++. .....+.+....++.||+..-. ...++++++.....+.+-.... ..
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~----~~~~~~l~~d~~~~~lywtD~~-------~~~I~r~~~~g~~~~~v~~~g~-~~ 81 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTG----VKEASALDFDVTDNRIYWTDIS-------LKTISRAFMNGSALEHVVEFGL-DY 81 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCS----CSCEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSC-SC
T ss_pred CCcEEEEECCCCCcceEEEcCC----CCceEEEEEECCCCEEEEEECC-------CCeEEEEECCCCCcEEEEeCCC-CC
Confidence 3457788887665444333331 1244566666668999998532 3478999987765554422211 11
Q ss_pred eeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec--cCCccccccccEEEE--CCEEEEEe-CccCCCccC
Q 017349 171 FFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTA--AKLRMGLARYDSAVM--GSKMYVTE-GWTWPFMFS 243 (373)
Q Consensus 171 ~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~~--~~~lyv~g-G~~~~~~~~ 243 (373)
..++++ .+++||+.-.. ...++++++....=+.+ ..+..| ...++. +|.||+.- |. .
T Consensus 82 P~GlAvD~~~~~LY~tD~~-------~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g~------~ 145 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTG-------TNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWGG------K 145 (628)
T ss_dssp CCEEEEETTTTEEEEEETT-------TTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEECSS------S
T ss_pred cceEEEEeCCCEEEEEECC-------CCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCCC------C
Confidence 224444 47899997443 25789998876542332 223222 233443 68999874 21 2
Q ss_pred CceEEEeCCCCceeecccCccCCcceEEEEE---CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEE
Q 017349 244 PRGGVYDINKDTWNLMSDGMKEGWTGISIVL---EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNG 320 (373)
Q Consensus 244 ~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 320 (373)
..|++.++....-+.+..... ....+.+ +++||+.... ...|+++|++...=+.+.. .. ...++++.
T Consensus 146 ~~I~r~~~dG~~~~~l~~~~~---~P~GlalD~~~~~LY~aD~~-~~~I~~~d~dG~~~~v~~~-~l-----~~P~glav 215 (628)
T 4a0p_A 146 PKIDRAAMDGSERTTLVPNVG---RANGLTIDYAKRRLYWTDLD-TNLIESSNMLGLNREVIAD-DL-----PHPFGLTQ 215 (628)
T ss_dssp CEEEEEETTSCSCEEEECSCS---SEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEEE-CC-----SCEEEEEE
T ss_pred CEEEEEeCCCCceEEEECCCC---CcceEEEccccCEEEEEECC-CCEEEEEcCCCCceEEeec-cC-----CCceEEEE
Confidence 588999887655444332111 1122222 6889998653 6689999987543333321 11 34478888
Q ss_pred eCCEEEEEeC
Q 017349 321 VEGKIYVVSS 330 (373)
Q Consensus 321 ~~~~l~i~GG 330 (373)
.+++||+.--
T Consensus 216 ~~~~ly~tD~ 225 (628)
T 4a0p_A 216 YQDYIYWTDW 225 (628)
T ss_dssp ETTEEEEEET
T ss_pred ECCEEEEecC
Confidence 8899998864
No 180
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.43 E-value=0.42 Score=42.50 Aligned_cols=152 Identities=9% Similarity=0.135 Sum_probs=77.0
Q ss_pred EEEecc-CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCC-----------C-CcceeeeeeEe--CCeEEEEcCC
Q 017349 123 CTSLPR-QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPM-----------L-TPRSFFASGNV--NGKIMAVGGT 187 (373)
Q Consensus 123 ~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-----------~-~~r~~~~~~~~--~~~iyv~GG~ 187 (373)
+..+.. ++.+++.|+.+ ..+.+||..+......... . ....-..+... ++.+++.++.
T Consensus 48 ~~~~s~~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 48 TLDIEPVEGRYMLSGGSD-------GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp EEEECTTTCCEEEEEETT-------SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred EEEEecCCCCEEEEEcCC-------CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 333433 56667776652 2588888887754332110 0 11111222222 4456666665
Q ss_pred CCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE----CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCc
Q 017349 188 GANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM----GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGM 263 (373)
Q Consensus 188 ~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~----~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~ 263 (373)
+ ..+.+||..+..-...-..+... ...... ++.+++.|+.+ ..+.+||+.++.-...-...
T Consensus 121 d-------~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------~~v~~~d~~~~~~~~~~~~~ 185 (408)
T 4a11_B 121 D-------KTLKVWDTNTLQTADVFNFEETV--YSHHMSPVSTKHCLVAVGTRG------PKVQLCDLKSGSCSHILQGH 185 (408)
T ss_dssp T-------SEEEEEETTTTEEEEEEECSSCE--EEEEECSSCSSCCEEEEEESS------SSEEEEESSSSCCCEEECCC
T ss_pred C-------CeEEEeeCCCCccceeccCCCce--eeeEeecCCCCCcEEEEEcCC------CeEEEEeCCCcceeeeecCC
Confidence 4 46889999887654332222211 111111 34466677655 57899999876532211111
Q ss_pred cCCcceEEEEECCe-EEEEeeCCCcceEEEeCCCC
Q 017349 264 KEGWTGISIVLEGK-LFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 264 ~~~~~~~~~~~~~~-l~v~gg~~~~~~~~yd~~~~ 297 (373)
..........-+++ +++.|+. ...+..||..+.
T Consensus 186 ~~~v~~~~~~~~~~~ll~~~~~-dg~i~i~d~~~~ 219 (408)
T 4a11_B 186 RQEILAVSWSPRYDYILATASA-DSRVKLWDVRRA 219 (408)
T ss_dssp CSCEEEEEECSSCTTEEEEEET-TSCEEEEETTCS
T ss_pred CCcEEEEEECCCCCcEEEEEcC-CCcEEEEECCCC
Confidence 11111111111344 6767665 568889998654
No 181
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.42 E-value=0.88 Score=43.30 Aligned_cols=116 Identities=9% Similarity=0.118 Sum_probs=71.3
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeC-CCCe--EEeccCCccc--------cccccEEEECCEEEEEeCccCCCc
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDP-ESDT--WTTAAKLRMG--------LARYDSAVMGSKMYVTEGWTWPFM 241 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~--------~~~~~~~~~~~~lyv~gG~~~~~~ 241 (373)
+.++.+++||+....+ ..++.+|. .+++ |+.-...+.. ......++.+++||+....
T Consensus 57 ~P~v~~g~vyv~~~~~-------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d----- 124 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFP-------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN----- 124 (571)
T ss_dssp CCEEETTEEEEECSTT-------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-----
T ss_pred ccEEECCEEEEEeCCC-------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC-----
Confidence 3456799999986521 35899999 7764 9875432211 1112345678999887542
Q ss_pred cCCceEEEeCCCCc--eeecccCccC--CcceEEEEECCeEEEEeeCC----CcceEEEeCCCC--ceeee
Q 017349 242 FSPRGGVYDINKDT--WNLMSDGMKE--GWTGISIVLEGKLFVISEHG----DCPMKQYNPDDD--TWRYV 302 (373)
Q Consensus 242 ~~~~i~~yd~~~~~--W~~~~~~~~~--~~~~~~~~~~~~l~v~gg~~----~~~~~~yd~~~~--~W~~~ 302 (373)
..++++|.++++ |+.-...... ......++.++++|+..+.. ...+..||.+++ .|+.-
T Consensus 125 --g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 125 --GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp --SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred --CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 479999998874 8753211111 11222256789888764321 358999999876 57653
No 182
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.41 E-value=0.49 Score=42.02 Aligned_cols=147 Identities=13% Similarity=0.131 Sum_probs=73.9
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
++.+++.|+.+ ..+.+||..+++-...-..+.+......... ++.+++.|+.+ ..+.+||..+.
T Consensus 111 ~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~d~~~~ 176 (408)
T 4a11_B 111 DTGMFTSSSFD-------KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-------PKVQLCDLKSG 176 (408)
T ss_dssp CTTCEEEEETT-------SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-------SSEEEEESSSS
T ss_pred CCcEEEEEeCC-------CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-------CeEEEEeCCCc
Confidence 55566666542 2688999988764433322222221111111 34466666654 35888998776
Q ss_pred eEEeccCCcccccccc-EEEE-CCE-EEEEeCccCCCccCCceEEEeCCCCc--eeeccc-----------CccCCcceE
Q 017349 207 TWTTAAKLRMGLARYD-SAVM-GSK-MYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSD-----------GMKEGWTGI 270 (373)
Q Consensus 207 ~W~~~~~~~~~~~~~~-~~~~-~~~-lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~-----------~~~~~~~~~ 270 (373)
.-.. .+........ .+.. ++. +++.|+.+ ..+..||..+.. ...+.. .........
T Consensus 177 ~~~~--~~~~~~~~v~~~~~~~~~~~ll~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 248 (408)
T 4a11_B 177 SCSH--ILQGHRQEILAVSWSPRYDYILATASAD------SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKV 248 (408)
T ss_dssp CCCE--EECCCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCE
T ss_pred ceee--eecCCCCcEEEEEECCCCCcEEEEEcCC------CcEEEEECCCCCcccccccccccccceeeccccccccCce
Confidence 4221 1111111111 2222 343 67777665 568899987653 111110 001111111
Q ss_pred -EEEE--CCeEEEEeeCCCcceEEEeCCCCc
Q 017349 271 -SIVL--EGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 271 -~~~~--~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
.+.+ +++.++.|+. ...+..||..+.+
T Consensus 249 ~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~ 278 (408)
T 4a11_B 249 NGLCFTSDGLHLLTVGT-DNRMRLWNSSNGE 278 (408)
T ss_dssp EEEEECTTSSEEEEEET-TSCEEEEETTTCC
T ss_pred eEEEEcCCCCEEEEecC-CCeEEEEECCCCc
Confidence 1223 5666666665 5678999987654
No 183
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.41 E-value=0.35 Score=42.05 Aligned_cols=155 Identities=12% Similarity=0.048 Sum_probs=78.6
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe-CC-eEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NG-KIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
++.+|+.++. ...++++|+.+++....-..+.......++.. ++ .+|+.+..+ ..+.+||+.++
T Consensus 10 ~~~~~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-------~~i~~~d~~t~ 75 (349)
T 1jmx_B 10 GHEYMIVTNY-------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-------GDIYGIDLDTC 75 (349)
T ss_dssp TCEEEEEEET-------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-------TEEEEEETTTT
T ss_pred CCEEEEEeCC-------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-------CcEEEEeCCCC
Confidence 6788888764 23799999998865432222210012233332 34 577765432 46899999988
Q ss_pred eEEeccCCcc-----ccccccEEEE-CCE-EEEEeCc--cCCC---ccCCceEEEeCCCCceeec-cc-CccCCcceEEE
Q 017349 207 TWTTAAKLRM-----GLARYDSAVM-GSK-MYVTEGW--TWPF---MFSPRGGVYDINKDTWNLM-SD-GMKEGWTGISI 272 (373)
Q Consensus 207 ~W~~~~~~~~-----~~~~~~~~~~-~~~-lyv~gG~--~~~~---~~~~~i~~yd~~~~~W~~~-~~-~~~~~~~~~~~ 272 (373)
+-...-..+. ...-...+.. +|+ +|+.... .... .....+.+||+.+++-... .. ..+......+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA 155 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEE
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeE
Confidence 7543222211 1111233333 554 5554421 0000 0125799999987543221 11 11122222223
Q ss_pred EECCeEEEEeeCCCcceEEEeCCCCceee
Q 017349 273 VLEGKLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 273 ~~~~~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
.-++++|+.++ .+.+||+.+++-..
T Consensus 156 s~dg~l~~~~~----~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 156 ADDGSLYVAGP----DIYKMDVKTGKYTV 180 (349)
T ss_dssp CTTSCEEEESS----SEEEECTTTCCEEE
T ss_pred CCCCcEEEccC----cEEEEeCCCCceec
Confidence 33677777432 59999998775443
No 184
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.39 E-value=1.1 Score=38.26 Aligned_cols=148 Identities=6% Similarity=-0.016 Sum_probs=75.0
Q ss_pred EeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCC
Q 017349 125 SLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPE 204 (373)
Q Consensus 125 ~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~ 204 (373)
.+..++..++.|+.+ ..+.+||..++.-...-.............-++++++.|+.+ ..+.+||..
T Consensus 20 ~fsp~~~~l~s~~~d-------g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-------~~i~vwd~~ 85 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYS-------GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-------FRIRVFNYN 85 (304)
T ss_dssp EECSSSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-------SEEEEEETT
T ss_pred EECCCCCEEEEEcCC-------CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-------CEEEEEECC
Confidence 333466677777652 268889988765322111111111111122255666666664 468899988
Q ss_pred CCeEEeccCCccccccc-cEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCc-ceEEEEE---CCeE
Q 017349 205 SDTWTTAAKLRMGLARY-DSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGW-TGISIVL---EGKL 278 (373)
Q Consensus 205 t~~W~~~~~~~~~~~~~-~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~-~~~~~~~---~~~l 278 (373)
+++-.. .+......- +.+.. ++.+++.|+.+ ..+..||..++. ..... ..... .-.++.+ ++.+
T Consensus 86 ~~~~~~--~~~~h~~~v~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~~-~~~~~-~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 86 TGEKVV--DFEAHPDYIRSIAVHPTKPYVLSGSDD------LTVKLWNWENNW-ALEQT-FEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp TCCEEE--EEECCSSCEEEEEECSSSSEEEEEETT------SCEEEEEGGGTT-EEEEE-ECCCCSCEEEEEECTTCTTE
T ss_pred CCcEEE--EEeCCCCcEEEEEEcCCCCEEEEECCC------CeEEEEECCCCc-chhhh-hcccCCcEEEEEECCCCCCE
Confidence 775321 111111111 12222 56677777766 578899987652 11111 11111 1112333 4567
Q ss_pred EEEeeCCCcceEEEeCCCC
Q 017349 279 FVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 279 ~v~gg~~~~~~~~yd~~~~ 297 (373)
++.|+. ...+..||..+.
T Consensus 156 l~sgs~-D~~v~iwd~~~~ 173 (304)
T 2ynn_A 156 FASGCL-DRTVKVWSLGQS 173 (304)
T ss_dssp EEEEET-TSEEEEEETTCS
T ss_pred EEEEeC-CCeEEEEECCCC
Confidence 777765 567888988654
No 185
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.37 E-value=0.51 Score=46.19 Aligned_cols=204 Identities=11% Similarity=0.084 Sum_probs=105.4
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC----ceeccCCCCCc
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN----QWQLASPMLTP 168 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~----~W~~~~~~~~~ 168 (373)
.+.++++.+.....+.... ....+.+....++.||+.-. ....++++++.+. .-..+-... .
T Consensus 387 ~I~~id~~~~~~~~~~~~~------~~p~gla~d~~~~~Ly~sD~-------~~~~I~~~~~~g~~~~~~~~~~i~~~-~ 452 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNL------RNVVALDTEVASNRIYWSDL-------SQRMICSTQLDRAHGVSSYDTVISRD-I 452 (699)
T ss_dssp C-CEECTTSCCEECCSCCC------TTCCCCEEETTTTEEEECCT-------TTTSBEEEESCCCCC-CCCCCBCCSC-C
T ss_pred ceEEEeCCCCcceeeeccC------cceEEEccccccCeEEEEec-------CCCeEEEEecCCCCCCcceEEEEeCC-C
Confidence 4667777777665543222 12234444444789998732 2347889998751 111111100 0
Q ss_pred ceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccC--CccccccccEEE--ECCEEEEEeCccCCCcc
Q 017349 169 RSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAK--LRMGLARYDSAV--MGSKMYVTEGWTWPFMF 242 (373)
Q Consensus 169 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~~~~~~~~~--~~~~lyv~gG~~~~~~~ 242 (373)
....++++ .+++||+.-.. ...++++++....-+.+.. +..| ..+++ .++.||+.--. .
T Consensus 453 ~~P~glavD~~~g~LY~tD~~-------~~~I~v~d~dg~~~~~l~~~~~~~P---~giavDp~~g~ly~td~~-----~ 517 (699)
T 1n7d_A 453 QAPDGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFREQGSKP---RAIVVDPVHGFMYWTDWG-----T 517 (699)
T ss_dssp --CCCEECCCSSSBCEECCTT-------TSCEEEEBSSSCCEEEECCCSSCCC---CCEECCSSSSCCEECCCS-----S
T ss_pred CCcceEEEEeeCCcEEEEecc-------CCeEEEEecCCCceEEEEeCCCCCc---ceEEEccCCCcEEEcccC-----C
Confidence 11122333 46788886322 2458899988765444321 2222 12333 25778876411 1
Q ss_pred CCceEEEeCCCCceeeccc-CccCCcceEEEE-ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEE
Q 017349 243 SPRGGVYDINKDTWNLMSD-GMKEGWTGISIV-LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNG 320 (373)
Q Consensus 243 ~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~-~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 320 (373)
...|+++++....-+.+.. .+..+ .+.++- .+++||+.... ...|+++|+....-+.+...+ .......+++.
T Consensus 518 ~~~I~~~~~dG~~~~~l~~~~l~~P-nGlavd~~~~~LY~aD~~-~~~I~~~d~dG~~~~~~~~~~---~~~~~P~glav 592 (699)
T 1n7d_A 518 PAKIKKGGLNGVDIYSLVTENIQWP-NGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDE---KRLAHPFSLAV 592 (699)
T ss_dssp SCCEEBCCSSSCCCCEESCSSCSSC-CCEEECTTTCCEEEEETT-TTEEEEECSSSSCCEEECCCS---SSCSSCCCCEE
T ss_pred CCeEEEEeCCCCCeeEEEeCCCCCc-cEEEEeccCCEEEEEecC-CCeEEEEccCCCceEEEEecC---CcCCCceEeEE
Confidence 2568888875443332211 11111 112222 25889998743 668999998754444443211 11134467777
Q ss_pred eCCEEEEEeC
Q 017349 321 VEGKIYVVSS 330 (373)
Q Consensus 321 ~~~~l~i~GG 330 (373)
.++.||+.-.
T Consensus 593 d~~~lywtd~ 602 (699)
T 1n7d_A 593 FEDKVFWTDI 602 (699)
T ss_dssp ETTEEEEECS
T ss_pred ECCEEEEEeC
Confidence 7889998874
No 186
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.35 E-value=0.24 Score=51.76 Aligned_cols=174 Identities=7% Similarity=0.027 Sum_probs=86.6
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
.+.+||..+.....+.... ..........++.++ .++.+ ..+.+||..+++-...-.........
T Consensus 1026 ~i~vwd~~~~~~~~~~~~~-------~~v~~~~~~~~~~l~-~~~~d-------g~v~vwd~~~~~~~~~~~~~~~~v~~ 1090 (1249)
T 3sfz_A 1026 VIQVWNWQTGDYVFLQAHQ-------ETVKDFRLLQDSRLL-SWSFD-------GTVKVWNVITGRIERDFTCHQGTVLS 1090 (1249)
T ss_dssp BEEEEETTTTEEECCBCCS-------SCEEEEEECSSSEEE-EEESS-------SEEEEEETTTTCCCEEEECCSSCCCC
T ss_pred EEEEEECCCCceEEEecCC-------CcEEEEEEcCCCcEE-EEECC-------CcEEEEECCCCceeEEEcccCCcEEE
Confidence 4778888877655432211 223333343355554 44431 26889998877533211111111111
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEE--ECCEEEEEeCccCCCccCCceEEEe
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAV--MGSKMYVTEGWTWPFMFSPRGGVYD 250 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~~~~~~i~~yd 250 (373)
....-+++.++.|+.+ ..+.+||..+.+ .+..+........++. -++++++.|+.+ ..+.+||
T Consensus 1091 ~~~s~d~~~l~s~s~d-------~~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~d------g~i~vwd 1155 (1249)
T 3sfz_A 1091 CAISSDATKFSSTSAD-------KTAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDN------GEIRIWN 1155 (1249)
T ss_dssp EEECSSSSSCEEECCS-------SCCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETT------SCCCEEE
T ss_pred EEECCCCCEEEEEcCC-------CcEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCC------CEEEEEE
Confidence 1122355666666654 246788876654 2222222111111222 267777777765 4688999
Q ss_pred CCCCceeecccC---------ccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCce
Q 017349 251 INKDTWNLMSDG---------MKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 251 ~~~~~W~~~~~~---------~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W 299 (373)
..+++-...-.+ ........+..-++++++.++ +.+..||..+++-
T Consensus 1156 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~---g~v~vwd~~~g~~ 1210 (1249)
T 3sfz_A 1156 VSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG---GYLKWWNVATGDS 1210 (1249)
T ss_dssp SSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES---SSEEEBCSSSCBC
T ss_pred CCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC---CeEEEEECCCCce
Confidence 987764322100 001111111223566666655 3899999877644
No 187
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.33 E-value=2 Score=40.61 Aligned_cols=181 Identities=9% Similarity=0.074 Sum_probs=86.3
Q ss_pred eEEEeeCCCC----Ce-eeCCCCCCCCCCCCCc-eEEEEecc--CCEEEEEcCccCCCCCCcceeEEEeCCCC------c
Q 017349 93 QWQALDPRSG----RW-FVLPPMPCPKAVCPQA-FACTSLPR--QGKLFVLGGMRSDTETPMQSTIMYRATTN------Q 158 (373)
Q Consensus 93 ~~~~~d~~~~----~W-~~~~~~~~~~~~~~~~-~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~t~------~ 158 (373)
.+.+||..+. +- ..+..- ... ..+..+.. ++..++.|+.+ ..+.+||..++ .
T Consensus 40 ~v~v~~~~~~~~~~~~~~~~~~h-------~~~~v~~~~~sp~~~~~~l~s~~~d-------g~v~vw~~~~~~~~~~~~ 105 (615)
T 1pgu_A 40 SAFVRCLDDGDSKVPPVVQFTGH-------GSSVVTTVKFSPIKGSQYLCSGDES-------GKVIVWGWTFDKESNSVE 105 (615)
T ss_dssp EEEEEECCSSCCSSCSEEEECTT-------TTSCEEEEEECSSTTCCEEEEEETT-------SEEEEEEEEEEGGGTEEE
T ss_pred eEEEEECCCCCCccccceEEecC-------CCceEEEEEECcCCCCCEEEEecCC-------CEEEEEeCCCCccccccc
Confidence 5778888765 22 222111 123 44555555 67777777652 26788887644 2
Q ss_pred eeccCCCCCc-ceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCE-EEEE
Q 017349 159 WQLASPMLTP-RSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSK-MYVT 233 (373)
Q Consensus 159 W~~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~-lyv~ 233 (373)
...+..+... ..-..++. -+++.++.++.+ ......+..+|... .-..+ .........+.+ ++. +++.
T Consensus 106 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~---~~~~~~v~~~d~~~-~~~~~---~~~~~~v~~~~~~~~~~~~l~~ 178 (615)
T 1pgu_A 106 VNVKSEFQVLAGPISDISWDFEGRRLCVVGEG---RDNFGVFISWDSGN-SLGEV---SGHSQRINACHLKQSRPMRSMT 178 (615)
T ss_dssp EEEEEEEECCSSCEEEEEECTTSSEEEEEECC---SSCSEEEEETTTCC-EEEEC---CSCSSCEEEEEECSSSSCEEEE
T ss_pred ccccchhhcccccEEEEEEeCCCCEEEEeccC---CCCccEEEEEECCC-cceee---ecCCccEEEEEECCCCCcEEEE
Confidence 2222222211 11122222 245556666543 11234567776221 11222 111111112222 443 6666
Q ss_pred eCccCCCccCCceEEEeCCCCceeecccCccC-CcceEEEEE--C-CeEEEEeeCCCcceEEEeCCCCceee
Q 017349 234 EGWTWPFMFSPRGGVYDINKDTWNLMSDGMKE-GWTGISIVL--E-GKLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 234 gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~-~~~~~~~~~--~-~~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
|+.+ ..+.+||..+.+-...-..... ...-.++.+ + +++++.|+. ...+.+||..+.+...
T Consensus 179 ~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~~~~ 243 (615)
T 1pgu_A 179 VGDD------GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS-DRKISCFDGKSGEFLK 243 (615)
T ss_dssp EETT------TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET-TCCEEEEETTTCCEEE
T ss_pred EeCC------CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC-CCeEEEEECCCCCEeE
Confidence 6655 5788999877653321111111 001112222 4 677777765 5689999988765443
No 188
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=95.32 E-value=0.82 Score=39.69 Aligned_cols=151 Identities=12% Similarity=0.114 Sum_probs=76.7
Q ss_pred CEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe-C---CeEEEEcCCCCCCCCcCceEEEEeCCC
Q 017349 130 GKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV-N---GKIMAVGGTGANINETMTAVECYDPES 205 (373)
Q Consensus 130 ~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~---~~iyv~GG~~~~~~~~~~~~~~yd~~t 205 (373)
..+++.|+.. ..-..+.+||..+++............-..+... + +.+++.|+.+ ..+.+||..+
T Consensus 31 ~~l~~~~s~~----~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~ 99 (357)
T 3i2n_A 31 AKFVTMGNFA----RGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-------GNLHIWNLEA 99 (357)
T ss_dssp SEEEEEEC------CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-------SCEEEECTTS
T ss_pred ceEEEecCcc----CCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-------CeEEEEeCCC
Confidence 3666666541 1123788999888775543322222222222222 2 4666666654 3588888877
Q ss_pred Ce--EEeccCCccccccccEE-------EECCEEEEEeCccCCCccCCceEEEeCCCCc--eeecccCccC-CcceEEEE
Q 017349 206 DT--WTTAAKLRMGLARYDSA-------VMGSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKE-GWTGISIV 273 (373)
Q Consensus 206 ~~--W~~~~~~~~~~~~~~~~-------~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~-~~~~~~~~ 273 (373)
.. -..+....... .... .-++.+++.|+.+ ..+.+||+.++. ...+...... ...-.++.
T Consensus 100 ~~~~~~~~~~~~~~v--~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 100 PEMPVYSVKGHKEII--NAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp CSSCSEEECCCSSCE--EEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred CCccEEEEEecccce--EEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 64 11221111100 0111 1256666777665 578999998765 2332221111 11111122
Q ss_pred ------ECCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 274 ------LEGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 274 ------~~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
-++++++.|+. ...+..||..+.+-.
T Consensus 172 ~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYD-NGDIKLFDLRNMALR 203 (357)
T ss_dssp EECCCC-CCCEEEEEET-TSEEEEEETTTTEEE
T ss_pred EEeccCCCCCEEEEEcc-CCeEEEEECccCcee
Confidence 36777777765 568999999877543
No 189
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.32 E-value=1.5 Score=42.89 Aligned_cols=119 Identities=7% Similarity=-0.089 Sum_probs=60.9
Q ss_pred CCCEEEEEEe-cCCCCceeEEEeeCCCCCeeeCCCCCCCC----------C----CCC----CceEEEEeccCCEEEEEc
Q 017349 76 SLPYLFIFSF-HKPTARIQWQALDPRSGRWFVLPPMPCPK----------A----VCP----QAFACTSLPRQGKLFVLG 136 (373)
Q Consensus 76 ~~~~l~~~gg-~~~~~~~~~~~~d~~~~~W~~~~~~~~~~----------~----~~~----~~~~~~~~~~~~~i~v~G 136 (373)
.+..|++.+. ........++.+|..+.+...+....... . ..+ .......++.+++.++++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 3455555543 22233457899999988776553322000 0 000 001222334466555544
Q ss_pred CccCCCCCCcceeEEEeCCCC---ceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc
Q 017349 137 GMRSDTETPMQSTIMYRATTN---QWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAA 212 (373)
Q Consensus 137 G~~~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 212 (373)
.. ..++++|..++ .-+.+.... ......+. -+++.++++.. ..++++|..+++.+.+.
T Consensus 127 ~~--------~~i~~~d~~~~~~~~~~~l~~~~--~~~~~~~~SPDG~~la~~~~--------~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 127 LG--------GELYLYDLKQEGKAAVRQLTHGE--GFATDAKLSPKGGFVSFIRG--------RNLWVIDLASGRQMQLT 188 (741)
T ss_dssp ET--------TEEEEEESSSCSTTSCCBCCCSS--SCEEEEEECTTSSEEEEEET--------TEEEEEETTTTEEEECC
T ss_pred eC--------CcEEEEECCCCCcceEEEcccCC--cccccccCCCCCCEEEEEeC--------CcEEEEecCCCCEEEec
Confidence 32 47999999887 544443321 11112222 25554444422 26999999988877664
No 190
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.31 E-value=2.1 Score=40.91 Aligned_cols=115 Identities=15% Similarity=0.252 Sum_probs=67.5
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeC-CCC--ceeccCCCCCc--------ceeeeeeE--eCCe----EEEEcCCCCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRA-TTN--QWQLASPMLTP--------RSFFASGN--VNGK----IMAVGGTGANI 191 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~-~t~--~W~~~~~~~~~--------r~~~~~~~--~~~~----iyv~GG~~~~~ 191 (373)
++.||+.... ...++.+|. .++ .|+.-...... ....+.+. .+++ ||+....
T Consensus 62 ~g~vyv~~~~-------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d---- 130 (599)
T 1w6s_A 62 DGKMYIHTSF-------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD---- 130 (599)
T ss_dssp TTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT----
T ss_pred CCEEEEEeCC-------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC----
Confidence 8999998642 236899999 777 48764432211 11223445 5677 8875432
Q ss_pred CCcCceEEEEeCCCCe--EEec-cCCccc-cccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCc--eeec
Q 017349 192 NETMTAVECYDPESDT--WTTA-AKLRMG-LARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLM 259 (373)
Q Consensus 192 ~~~~~~~~~yd~~t~~--W~~~-~~~~~~-~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~ 259 (373)
..++.+|..|++ |+.- ...... ....+.++.+++||+..+.. .......+.+||.++++ |+.-
T Consensus 131 ----g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~-e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 131 ----GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGA-ELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp ----SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCG-GGTCCCEEEEEETTTCCEEEEEE
T ss_pred ----CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccc-ccCCCCeEEEEECCCCcEEEEEc
Confidence 358999998885 8753 221111 11223456789888654311 11123579999999875 8653
No 191
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.28 E-value=2.4 Score=41.27 Aligned_cols=120 Identities=18% Similarity=0.236 Sum_probs=67.2
Q ss_pred CCCCEEEEEEecCCCCceeEEEeeCCCCC--eeeCCCCCCCCC--CC--CCceEEEEeccCCEEEEEcCccCCCCCCcce
Q 017349 75 LSLPYLFIFSFHKPTARIQWQALDPRSGR--WFVLPPMPCPKA--VC--PQAFACTSLPRQGKLFVLGGMRSDTETPMQS 148 (373)
Q Consensus 75 ~~~~~l~~~gg~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~--~~--~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 148 (373)
..++.+|+... ...++.+|..+.+ |+.-...+.... .+ ....+.++. ++.||+... ...
T Consensus 75 v~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~--~~~v~v~~~--------dg~ 139 (677)
T 1kb0_A 75 VVDGIMYVSAS-----WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAW--------DGR 139 (677)
T ss_dssp EETTEEEEECG-----GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECT--------TSE
T ss_pred EECCEEEEECC-----CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE--CCEEEEEcC--------CCE
Confidence 34778888643 3468899987765 766543321000 00 011233344 888888632 137
Q ss_pred eEEEeCCCCc--eeccCC--CCC-cceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEec
Q 017349 149 TIMYRATTNQ--WQLASP--MLT-PRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTA 211 (373)
Q Consensus 149 ~~~yd~~t~~--W~~~~~--~~~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~ 211 (373)
++.+|..|++ |+.-.. ... .....+.++.++++|+..+.. .......++.||..|++ |+.-
T Consensus 140 l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~--~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGA--EYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCT--TTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccc--ccCCCCEEEEEECCCCcEEEEec
Confidence 9999998884 765322 111 112223345688887754321 11224579999999875 8653
No 192
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.25 E-value=1.8 Score=39.74 Aligned_cols=127 Identities=13% Similarity=0.112 Sum_probs=73.2
Q ss_pred CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec--cCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCc
Q 017349 178 NGKIMAVGGTGANINETMTAVECYDPESDTWTTA--AKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDT 255 (373)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~ 255 (373)
++++|++.|.. .++||..+++...- +.+|. --++...+|++|+|-| +..++||..+.+
T Consensus 158 ~~~~yfFkG~~---------yw~yd~~~~~~~~~~w~gi~~---iDAA~~~~g~~YfFkG--------~~y~rfd~~~~~ 217 (460)
T 1qhu_A 158 DEGILFFQGNR---------KWFWDLTTGTKKERSWPAVGN---CTSALRWLGRYYCFQG--------NQFLRFNPVSGE 217 (460)
T ss_dssp SSEEEEEETTE---------EEEEETTTTEEEEECCTTSCC---CSEEEEETTEEEEEET--------TEEEEECTTTCC
T ss_pred CCeEEEEeccc---------EEEEecccceeecccCCCCCc---cchheeeCCceEEEEC--------CEEEEEcCccCc
Confidence 67889887753 78999988765431 22332 2345556899999988 357888876543
Q ss_pred ------------eeecccC-------------------ccCCcceEEEE-ECCeEEEEeeCCCcceEEEeCCCCceee--
Q 017349 256 ------------WNLMSDG-------------------MKEGWTGISIV-LEGKLFVISEHGDCPMKQYNPDDDTWRY-- 301 (373)
Q Consensus 256 ------------W~~~~~~-------------------~~~~~~~~~~~-~~~~l~v~gg~~~~~~~~yd~~~~~W~~-- 301 (373)
|.-++.. .+.....+... .+|++|.+-|. ..|++|...+.+..
T Consensus 218 v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg~---~yWR~~~~~~~~~p~~ 294 (460)
T 1qhu_A 218 VPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSGS---HYWRLDTNRDGWHSWP 294 (460)
T ss_dssp CCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEETT---EEEECTTGGGCCCCEE
T ss_pred ccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeCC---EEEEEecCCCCcCccc
Confidence 2221110 00111222233 47899999875 78999876543321
Q ss_pred ecC--CCCCCcccccceEEEEeCCEEEEEeCC
Q 017349 302 VGG--DKFPCEVMHRPFAVNGVEGKIYVVSSG 331 (373)
Q Consensus 302 ~~~--~~~~~~~~~~~~~~~~~~~~l~i~GG~ 331 (373)
+.. ..+| ..--++...++++|+|=|.
T Consensus 295 Is~~WpglP----~~IDAAf~~~~~~yfFkG~ 322 (460)
T 1qhu_A 295 IAHQWPQGP----STVDAAFSWEDKLYLIQDT 322 (460)
T ss_dssp GGGTCTTSC----SSCSEEEEETTEEEEEETT
T ss_pred hhhhccCCC----CCCcEEEEECCeEEEEeCC
Confidence 111 1223 2234444557899999875
No 193
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.25 E-value=0.84 Score=44.45 Aligned_cols=114 Identities=20% Similarity=0.323 Sum_probs=71.6
Q ss_pred eeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCccc--------cccccEEEECCEEEEEeCccCCCccC
Q 017349 174 SGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRMG--------LARYDSAVMGSKMYVTEGWTWPFMFS 243 (373)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--------~~~~~~~~~~~~lyv~gG~~~~~~~~ 243 (373)
.++.+++||+.... ..++.+|..|++ |+.-...+.. ......++.+++||+....
T Consensus 73 P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d------- 137 (677)
T 1kb0_A 73 PVVVDGIMYVSASW--------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD------- 137 (677)
T ss_dssp CEEETTEEEEECGG--------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT-------
T ss_pred CEEECCEEEEECCC--------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC-------
Confidence 45578999988643 358999999875 8875433211 1122345678899876432
Q ss_pred CceEEEeCCCCc--eeeccc-CccC--CcceEEEEECCeEEEEeeCC----CcceEEEeCCCC--ceeee
Q 017349 244 PRGGVYDINKDT--WNLMSD-GMKE--GWTGISIVLEGKLFVISEHG----DCPMKQYNPDDD--TWRYV 302 (373)
Q Consensus 244 ~~i~~yd~~~~~--W~~~~~-~~~~--~~~~~~~~~~~~l~v~gg~~----~~~~~~yd~~~~--~W~~~ 302 (373)
..++++|.++++ |+.-.. .... ......++.++++|+..+.. ...+..||.+++ .|+.-
T Consensus 138 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 138 GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 479999998875 875321 1111 11222266788888865321 357999999876 47754
No 194
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.23 E-value=0.72 Score=40.61 Aligned_cols=143 Identities=8% Similarity=0.014 Sum_probs=71.5
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce-eeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS-FFASGNV--NGKIMAVGGTGANINETMTAVECYDPES 205 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~-~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t 205 (373)
+..+++.|+.+ ..+.+||..+.+-...-....... ..+++.. ++++++.|+.+ ..+.+||..+
T Consensus 181 ~~~~l~s~s~D-------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-------g~v~~wd~~~ 246 (344)
T 4gqb_B 181 KDSVFLSCSED-------NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-------GTVSLVDTKS 246 (344)
T ss_dssp CTTEEEEEETT-------SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-------SEEEEEESCC
T ss_pred CCCceeeeccc-------cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC-------CcEEEEECCC
Confidence 34577777652 258899988775432211111111 1122222 56777777765 3588899887
Q ss_pred CeEEeccCCccccccccEEEE--CC-EEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE---CCeEE
Q 017349 206 DTWTTAAKLRMGLARYDSAVM--GS-KMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL---EGKLF 279 (373)
Q Consensus 206 ~~W~~~~~~~~~~~~~~~~~~--~~-~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~l~ 279 (373)
++- +..+......-..+.+ ++ ++++.|+.+ ..+.+||..+++-..+.. . ..... ++.+ +..++
T Consensus 247 ~~~--~~~~~~h~~~v~~v~fsp~g~~~lasgs~D------~~i~vwd~~~~~~~~~~~-H-~~~V~-~v~~sp~~~~ll 315 (344)
T 4gqb_B 247 TSC--VLSSAVHSQCVTGLVFSPHSVPFLASLSED------CSLAVLDSSLSELFRSQA-H-RDFVR-DATWSPLNHSLL 315 (344)
T ss_dssp --C--CEEEECCSSCEEEEEECSSSSCCEEEEETT------SCEEEECTTCCEEEEECC-C-SSCEE-EEEECSSSTTEE
T ss_pred CcE--EEEEcCCCCCEEEEEEccCCCeEEEEEeCC------CeEEEEECCCCcEEEEcC-C-CCCEE-EEEEeCCCCeEE
Confidence 642 2122221111112222 34 566667665 578999998875332211 1 11111 1333 34566
Q ss_pred EEeeCCCcceEEEeCCCC
Q 017349 280 VISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 280 v~gg~~~~~~~~yd~~~~ 297 (373)
+.||. ...+..|+..++
T Consensus 316 as~s~-D~~v~~w~v~~~ 332 (344)
T 4gqb_B 316 TTVGW-DHQVVHHVVPTE 332 (344)
T ss_dssp EEEET-TSCEEEEECCC-
T ss_pred EEEcC-CCeEEEEECCCC
Confidence 66665 457777777653
No 195
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.20 E-value=1.8 Score=39.41 Aligned_cols=156 Identities=9% Similarity=-0.026 Sum_probs=79.0
Q ss_pred EEEeccCC-EEEEEcCccCCCCCCcceeEEEeCC--CCceecc-CCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCce
Q 017349 123 CTSLPRQG-KLFVLGGMRSDTETPMQSTIMYRAT--TNQWQLA-SPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTA 197 (373)
Q Consensus 123 ~~~~~~~~-~i~v~GG~~~~~~~~~~~~~~yd~~--t~~W~~~-~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~ 197 (373)
+..+..++ .|++.|+.+ ..+.+||.. ++..... .....+.....++.. +++.++.|+.+ ..
T Consensus 107 ~~~~s~d~~~l~~~~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-------g~ 172 (450)
T 2vdu_B 107 NLRLTSDESRLIACADSD-------KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF-------GD 172 (450)
T ss_dssp EEEECTTSSEEEEEEGGG-------TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-------SE
T ss_pred EEEEcCCCCEEEEEECCC-------CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC-------Cc
Confidence 33343345 445777652 268888877 4432221 110111111122222 45566666543 35
Q ss_pred EEEEeCCCCeEEe--ccCCccccccc-cEE-EEC---CEEEEEeCccCCCccCCceEEEeCCCCceeec-ccCccCCcce
Q 017349 198 VECYDPESDTWTT--AAKLRMGLARY-DSA-VMG---SKMYVTEGWTWPFMFSPRGGVYDINKDTWNLM-SDGMKEGWTG 269 (373)
Q Consensus 198 ~~~yd~~t~~W~~--~~~~~~~~~~~-~~~-~~~---~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~-~~~~~~~~~~ 269 (373)
++.++..+..... +..+....... ..+ .-+ +++++.|+.+ ..+.+||+.++.-... ..........
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD------EHIKISHYPQCFIVDKWLFGHKHFVSS 246 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT------SCEEEEEESCTTCEEEECCCCSSCEEE
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC------CcEEEEECCCCceeeeeecCCCCceEE
Confidence 7888876654321 11222111111 122 236 7777777765 5789999987754321 1111111222
Q ss_pred EEEEECCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 270 ISIVLEGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 270 ~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
.+.. ++++++.|+. ...+.+||..+++..
T Consensus 247 ~~~s-d~~~l~s~~~-d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 247 ICCG-KDYLLLSAGG-DDKIFAWDWKTGKNL 275 (450)
T ss_dssp EEEC-STTEEEEEES-SSEEEEEETTTCCEE
T ss_pred EEEC-CCCEEEEEeC-CCeEEEEECCCCcEe
Confidence 2233 7877777775 568999999877543
No 196
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.16 E-value=1.3 Score=37.56 Aligned_cols=175 Identities=9% Similarity=0.042 Sum_probs=81.2
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCc-eeccCCCCCccee
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQ-WQLASPMLTPRSF 171 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~r~~ 171 (373)
.+.+||..+.......... . ....+.....++..++.|+.++ .+.+||..... ...+..+......
T Consensus 40 ~v~vw~~~~~~~~~~~~~~--~----~~v~~~~~~~~~~~l~~~~~dg-------~i~~~~~~~~~~~~~~~~~~~~~~~ 106 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYTG--Q----GFLNSVCYDSEKELLLFGGKDT-------MINGVPLFATSGEDPLYTLIGHQGN 106 (313)
T ss_dssp EEEEEEESSSEEEEEEEEC--S----SCEEEEEEETTTTEEEEEETTS-------CEEEEETTCCTTSCC-CEECCCSSC
T ss_pred cEEEEECCCCEEEEEeecC--C----ccEEEEEECCCCCEEEEecCCC-------eEEEEEeeecCCCCcccchhhcccC
Confidence 4677887665433221111 1 2233333444677777776521 46777765542 2222222222222
Q ss_pred eeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEe
Q 017349 172 FASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYD 250 (373)
Q Consensus 172 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd 250 (373)
.....+++..++.|+.+ ..+.+||......... ....+ ........ ++..++.++.+ ..+..||
T Consensus 107 i~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~~~~~-~~~~~-v~~~~~~~~~~~~l~~~~~d------~~i~i~d 171 (313)
T 3odt_A 107 VCSLSFQDGVVISGSWD-------KTAKVWKEGSLVYNLQ-AHNAS-VWDAKVVSFSENKFLTASAD------KTIKLWQ 171 (313)
T ss_dssp EEEEEEETTEEEEEETT-------SEEEEEETTEEEEEEE-CCSSC-EEEEEEEETTTTEEEEEETT------SCEEEEE
T ss_pred EEEEEecCCEEEEEeCC-------CCEEEEcCCcEEEecc-cCCCc-eeEEEEccCCCCEEEEEECC------CCEEEEe
Confidence 22233355666666654 3577888222221111 11111 11111122 56666677655 5788888
Q ss_pred CCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 251 INKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 251 ~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
..+..- .+..............-+++ ++.|+. ...+..||..+.+
T Consensus 172 ~~~~~~-~~~~~~~~~i~~~~~~~~~~-~~~~~~-dg~i~i~d~~~~~ 216 (313)
T 3odt_A 172 NDKVIK-TFSGIHNDVVRHLAVVDDGH-FISCSN-DGLIKLVDMHTGD 216 (313)
T ss_dssp TTEEEE-EECSSCSSCEEEEEEEETTE-EEEEET-TSEEEEEETTTCC
T ss_pred cCceEE-EEeccCcccEEEEEEcCCCe-EEEccC-CCeEEEEECCchh
Confidence 433222 11111222222222445677 555554 5689999987654
No 197
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.12 E-value=1.2 Score=38.22 Aligned_cols=198 Identities=15% Similarity=0.205 Sum_probs=96.4
Q ss_pred CCEEEEEEecCCCCceeEEEeeCC-CCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPR-SGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT 155 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~ 155 (373)
++.+|+.. ....++.||+. ...|......+ . ........++.||+... ...+++||+.
T Consensus 107 ~~~l~v~t-----~~~~l~~~d~~g~~~~~~~~~~~-------~-~~~~~~~~~g~l~vgt~--------~~~l~~~d~~ 165 (330)
T 3hxj_A 107 EDILYVTS-----MDGHLYAINTDGTEKWRFKTKKA-------I-YATPIVSEDGTIYVGSN--------DNYLYAINPD 165 (330)
T ss_dssp TTEEEEEC-----TTSEEEEECTTSCEEEEEECSSC-------C-CSCCEECTTSCEEEECT--------TSEEEEECTT
T ss_pred CCEEEEEe-----cCCEEEEEcCCCCEEEEEcCCCc-------e-eeeeEEcCCCEEEEEcC--------CCEEEEECCC
Confidence 66676642 12357888887 33355432211 0 11112222677777432 1368899988
Q ss_pred CC-ceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCC-eEEeccCCccccccccEEEE-CCEEE
Q 017349 156 TN-QWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESD-TWTTAAKLRMGLARYDSAVM-GSKMY 231 (373)
Q Consensus 156 t~-~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~~~~~~~~~-~~~ly 231 (373)
.. .|..... ... ..+.+. -++.||+.. ..++.||.... .|+..... .. ..+.+.. +|.||
T Consensus 166 g~~~~~~~~~--~~~-~~~~~~d~~g~l~v~t----------~~l~~~d~~g~~~~~~~~~~--~~-~~~~~~~~~g~l~ 229 (330)
T 3hxj_A 166 GTEKWRFKTN--DAI-TSAASIGKDGTIYFGS----------DKVYAINPDGTEKWNFYAGY--WT-VTRPAISEDGTIY 229 (330)
T ss_dssp SCEEEEEECS--SCC-CSCCEECTTCCEEEES----------SSEEEECTTSCEEEEECCSS--CC-CSCCEECTTSCEE
T ss_pred CCEeEEEecC--CCc-eeeeEEcCCCEEEEEe----------CEEEEECCCCcEEEEEccCC--cc-eeceEECCCCeEE
Confidence 22 3544321 111 122233 367777754 24888884322 46654221 11 1222333 55787
Q ss_pred EEeCccCCCccCCceEEEeCCCCc-eeecccCccCCcceEEEEE-CCeEEEEeeCCCcceEEEeCCCC-ceeeecCCCCC
Q 017349 232 VTEGWTWPFMFSPRGGVYDINKDT-WNLMSDGMKEGWTGISIVL-EGKLFVISEHGDCPMKQYNPDDD-TWRYVGGDKFP 308 (373)
Q Consensus 232 v~gG~~~~~~~~~~i~~yd~~~~~-W~~~~~~~~~~~~~~~~~~-~~~l~v~gg~~~~~~~~yd~~~~-~W~~~~~~~~~ 308 (373)
+... . ..+++||..... |..... .......+.- +++||+... ...+.+||++.+ .|..- ++..
T Consensus 230 v~t~-~------~gl~~~~~~g~~~~~~~~~---~~~~~~~~~~~~g~l~v~t~--~ggl~~~d~~g~~~~~~~--~~~~ 295 (330)
T 3hxj_A 230 VTSL-D------GHLYAINPDGTEKWRFKTG---KRIESSPVIGNTDTIYFGSY--DGHLYAINPDGTEKWNFE--TGSW 295 (330)
T ss_dssp EEET-T------TEEEEECTTSCEEEEEECS---SCCCSCCEECTTSCEEEECT--TCEEEEECTTSCEEEEEE--CSSC
T ss_pred EEcC-C------CeEEEECCCCCEeEEeeCC---CCccccceEcCCCeEEEecC--CCCEEEECCCCcEEEEEE--cCCc
Confidence 7542 1 468888875444 543221 1111112333 678887543 347899997533 35432 1211
Q ss_pred CcccccceEEEE-eCCEEEEEeC
Q 017349 309 CEVMHRPFAVNG-VEGKIYVVSS 330 (373)
Q Consensus 309 ~~~~~~~~~~~~-~~~~l~i~GG 330 (373)
...+++. .+++||+-+.
T Consensus 296 -----~~~~~~~d~~g~l~~gt~ 313 (330)
T 3hxj_A 296 -----IIATPVIDENGTIYFGTR 313 (330)
T ss_dssp -----CCSCCEECTTCCEEEECT
T ss_pred -----cccceEEcCCCEEEEEcC
Confidence 2233334 6788887543
No 198
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.08 E-value=0.89 Score=39.39 Aligned_cols=199 Identities=11% Similarity=0.016 Sum_probs=98.7
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEecc-CCEEEEEcCccCCC----------CCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPR-QGKLFVLGGMRSDT----------ETP 145 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~GG~~~~~----------~~~ 145 (373)
++.||+.... ..+..||+.+.....+....... ........ .+.. ++.||+........ ...
T Consensus 91 ~g~l~v~d~~-----~~i~~~d~~~g~~~~~~~~~~~~-~~~~p~~i-~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 91 NNQLYIVDCY-----YHLSVVGSEGGHATQLATSVDGV-PFKWLYAV-TVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp TTEEEEEETT-----TEEEEECTTCEECEEEESEETTE-ECSCEEEE-EECTTTCCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred CCcEEEEECC-----CCEEEEeCCCCEEEEecccCCCC-cccccceE-EEecCCCEEEEECCcccccccccceehcccCC
Confidence 5678876321 23778898876554443211010 00111233 3344 67899874321000 012
Q ss_pred cceeEEEeCCCCceeccC-CCCCcceeeeeeEe-C-CeEEEEcCCCCCCCCcCceEEEEeCCCC---eEEeccCCccccc
Q 017349 146 MQSTIMYRATTNQWQLAS-PMLTPRSFFASGNV-N-GKIMAVGGTGANINETMTAVECYDPESD---TWTTAAKLRMGLA 219 (373)
Q Consensus 146 ~~~~~~yd~~t~~W~~~~-~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~~~ 219 (373)
...+++||+.+++.+.+. .+.. ...++.. + +.||+.-.. ...+.+|+..+. ..+.+..++.
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~~~~---p~gia~~~dg~~lyv~d~~-------~~~I~~~~~~~~~~~~~~~~~~~~g--- 230 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKELHV---PGGAEVSADSSFVLVAEFL-------SHQIVKYWLEGPKKGTAEVLVKIPN--- 230 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEEESC---CCEEEECTTSSEEEEEEGG-------GTEEEEEESSSTTTTCEEEEEECSS---
T ss_pred CceEEEEeCCCCEEEEeccCCcc---CcceEECCCCCEEEEEeCC-------CCeEEEEECCCCcCCccceEEeCCC---
Confidence 357999999887655432 1111 1223332 3 358876332 246888988752 3433332221
Q ss_pred cccEEEE--CCEEEEEeCccCCC----ccCCceEEEeCCCCceeecccCcc--CCcceEEEEECCeEEEEeeCCCcceEE
Q 017349 220 RYDSAVM--GSKMYVTEGWTWPF----MFSPRGGVYDINKDTWNLMSDGMK--EGWTGISIVLEGKLFVISEHGDCPMKQ 291 (373)
Q Consensus 220 ~~~~~~~--~~~lyv~gG~~~~~----~~~~~i~~yd~~~~~W~~~~~~~~--~~~~~~~~~~~~~l~v~gg~~~~~~~~ 291 (373)
+....+ +|.||+........ .....+.+||+....-..+..+.. ......++..+++||+.+.. ...+.+
T Consensus 231 -P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~-~~~i~~ 308 (322)
T 2fp8_A 231 -PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF-HGSVGI 308 (322)
T ss_dssp -EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS-CSEEEE
T ss_pred -CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC-CCceEE
Confidence 222233 57888875331000 012468899986544444443211 11222234568899987543 668899
Q ss_pred EeCCCC
Q 017349 292 YNPDDD 297 (373)
Q Consensus 292 yd~~~~ 297 (373)
|+++.+
T Consensus 309 ~~~~~~ 314 (322)
T 2fp8_A 309 LVYDKK 314 (322)
T ss_dssp EEC---
T ss_pred Eecccc
Confidence 987644
No 199
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.08 E-value=1.5 Score=37.97 Aligned_cols=186 Identities=7% Similarity=-0.046 Sum_probs=100.9
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCC----CCeeeC-C-CCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeE
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRS----GRWFVL-P-PMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTI 150 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~----~~W~~~-~-~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~ 150 (373)
++.||+... ....++++|+.. .....+ . .+. .-.+.++...++.||+.-.. .+.+.
T Consensus 41 ~~~ly~~D~----~~~~I~~~~~~g~~~~~~~~~~~~~~~~-------~p~glavd~~~~~ly~~d~~-------~~~I~ 102 (316)
T 1ijq_A 41 SNRIYWSDL----SQRMICSTQLDRAHGVSSYDTVISRDIQ-------APDGLAVDWIHSNIYWTDSV-------LGTVS 102 (316)
T ss_dssp TTEEEEEET----TTTEEEEEEC--------CEEEECSSCS-------CCCEEEEETTTTEEEEEETT-------TTEEE
T ss_pred CCEEEEEEC----CCCcEEEEECCCCCCCcccEEEEeCCCC-------CcCEEEEeecCCeEEEEECC-------CCEEE
Confidence 567887643 244688888875 222222 1 122 22455554448899998432 34788
Q ss_pred EEeCCCCceeccC--CCCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccc-cEEE
Q 017349 151 MYRATTNQWQLAS--PMLTPRSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARY-DSAV 225 (373)
Q Consensus 151 ~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~-~~~~ 225 (373)
++|+....-+.+. .+..| ..+++ .++.||+..-. ....++++++....-+.+..- ....+ +.++
T Consensus 103 ~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~------~~~~I~~~~~dG~~~~~~~~~--~~~~P~gla~ 171 (316)
T 1ijq_A 103 VADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG------TPAKIKKGGLNGVDIYSLVTE--NIQWPNGITL 171 (316)
T ss_dssp EEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS------SSCEEEEEETTSCCEEEEECS--SCSCEEEEEE
T ss_pred EEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC------CCCeEEEEcCCCCCeEEEEEC--CCCCceEEEE
Confidence 9998765433322 22222 23344 36889987421 124689998875543333211 11122 2333
Q ss_pred E--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCc-cCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 226 M--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGM-KEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 226 ~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
- +++||+.-... ..|+++|+....-+.+.... ....-...++.++.||+... ....|.++|+.+++
T Consensus 172 d~~~~~lY~~D~~~------~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~-~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 172 DLLSGRLYWVDSKL------HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI-INEAIFSANRLTGS 240 (316)
T ss_dssp ETTTTEEEEEETTT------TEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEET-TTTEEEEEETTTCC
T ss_pred eccCCEEEEEECCC------CeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEEC-CCCeEEEEeCCCCc
Confidence 3 67899885433 68999998753322222111 11111122557899999873 36789999986654
No 200
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=95.08 E-value=1.1 Score=38.75 Aligned_cols=145 Identities=10% Similarity=0.046 Sum_probs=71.2
Q ss_pred CCE-EEEEcCccCCCCCCcceeEEEeC-CCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 129 QGK-LFVLGGMRSDTETPMQSTIMYRA-TTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 129 ~~~-i~v~GG~~~~~~~~~~~~~~yd~-~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
++. .++.|+.+ ..+.+||. .++....+........-..+....+.+++.++.+ ..+.+||..+.
T Consensus 67 ~~~~~l~~~~~d-------g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-------~~i~iwd~~~~ 132 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-------GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-------GLIEVIDPRNY 132 (342)
T ss_dssp SSSEEEEEEETT-------SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-------SEEEEECHHHH
T ss_pred CCCcEEEEEcCC-------CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-------CeEEEEccccc
Confidence 566 66666642 26899999 8876655543111122222332325556666654 35788887640
Q ss_pred ---e----EEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCC-Cc--eeecccCccCCcceEEEEE--
Q 017349 207 ---T----WTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINK-DT--WNLMSDGMKEGWTGISIVL-- 274 (373)
Q Consensus 207 ---~----W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~-~~--W~~~~~~~~~~~~~~~~~~-- 274 (373)
. .+.+..+.....-.+.....+. +++|+.+ ..+..||..+ .. ............ ......
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~i-~~i~~~~~ 204 (342)
T 1yfq_A 133 GDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNN------SQVQWFRLPLCEDDNGTIEESGLKYQI-RDVALLPK 204 (342)
T ss_dssp TTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEEEEST------TEEEEEESSCCTTCCCEEEECSCSSCE-EEEEECSG
T ss_pred ccccccccCCeeeEEeeCCceEEEEecCCc-EEEEeCC------CeEEEEECCccccccceeeecCCCCce-eEEEECCC
Confidence 0 2222222222122223333444 4455444 5789999987 43 222222112111 111222
Q ss_pred CCeEEEEeeCCCcceEEEeCCC
Q 017349 275 EGKLFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 275 ~~~l~v~gg~~~~~~~~yd~~~ 296 (373)
+++++++|+. ...+..||...
T Consensus 205 ~~~~l~~~~~-dg~i~i~~~~~ 225 (342)
T 1yfq_A 205 EQEGYACSSI-DGRVAVEFFDD 225 (342)
T ss_dssp GGCEEEEEET-TSEEEEEECCT
T ss_pred CCCEEEEEec-CCcEEEEEEcC
Confidence 5677777765 45666665543
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.07 E-value=0.87 Score=38.94 Aligned_cols=174 Identities=10% Similarity=0.008 Sum_probs=88.0
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCe
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDT 207 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 207 (373)
++.+|++.-. ...+++||+.++....... + ....+++. -++++|+..+ ..+.+||+.+++
T Consensus 24 ~~~l~~~d~~-------~~~i~~~d~~~~~~~~~~~-~--~~~~~i~~~~dG~l~v~~~---------~~l~~~d~~~g~ 84 (297)
T 3g4e_A 24 SNSLLFVDIP-------AKKVCRWDSFTKQVQRVTM-D--APVSSVALRQSGGYVATIG---------TKFCALNWKEQS 84 (297)
T ss_dssp TTEEEEEETT-------TTEEEEEETTTCCEEEEEC-S--SCEEEEEEBTTSSEEEEET---------TEEEEEETTTTE
T ss_pred CCEEEEEECC-------CCEEEEEECCCCcEEEEeC-C--CceEEEEECCCCCEEEEEC---------CeEEEEECCCCc
Confidence 5788887543 3479999999886543321 1 11222333 2566666531 358999999998
Q ss_pred EEeccCCccc--cccccEEE--ECCEEEEEeCccCC-----CccCCceEEEeCCCCceeecccCccCCcceEEEEE--CC
Q 017349 208 WTTAAKLRMG--LARYDSAV--MGSKMYVTEGWTWP-----FMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EG 276 (373)
Q Consensus 208 W~~~~~~~~~--~~~~~~~~--~~~~lyv~gG~~~~-----~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~ 276 (373)
++.+...... ........ -+|++|+..-.... ......++++|+. ++...+..... .. ....+ ++
T Consensus 85 ~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~--~p-ngi~~spdg 160 (297)
T 3g4e_A 85 AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVD--IS-NGLDWSLDH 160 (297)
T ss_dssp EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEES--BE-EEEEECTTS
T ss_pred EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccc--cc-cceEEcCCC
Confidence 8776543221 11112222 26888874321100 0122468888875 33333221111 11 12222 44
Q ss_pred -eEEEEeeCCCcceEEEeC--CCCceee---ecCCCCCCcccccceEEEE-eCCEEEEEe
Q 017349 277 -KLFVISEHGDCPMKQYNP--DDDTWRY---VGGDKFPCEVMHRPFAVNG-VEGKIYVVS 329 (373)
Q Consensus 277 -~l~v~gg~~~~~~~~yd~--~~~~W~~---~~~~~~~~~~~~~~~~~~~-~~~~l~i~G 329 (373)
.||+.... ...+++||. .++.... +..++.. .....+++. -+|+||+..
T Consensus 161 ~~lyv~~~~-~~~i~~~~~d~~~G~~~~~~~~~~~~~~---~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 161 KIFYYIDSL-SYSVDAFDYDLQTGQISNRRSVYKLEKE---EQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp CEEEEEEGG-GTEEEEEEECTTTCCEEEEEEEEECCGG---GCEEEEEEEBTTSCEEEEE
T ss_pred CEEEEecCC-CCcEEEEeccCCCCcccCcEEEEECCCC---CCCCCeeEECCCCCEEEEE
Confidence 57777643 457888875 4554432 1111110 012244443 467888875
No 202
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.06 E-value=1.6 Score=38.47 Aligned_cols=154 Identities=9% Similarity=-0.091 Sum_probs=74.2
Q ss_pred cceeEEEeCCCCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEE
Q 017349 146 MQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSA 224 (373)
Q Consensus 146 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~ 224 (373)
...++++|+.+++-+.+.... ....+....- +++.+++.... ........++.+|..+...+.+............+
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~-~~~~~~~~sp~dg~~l~~~~~~-~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQEN-QWLGHPIYRPYDDSTVAFCHEG-PHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEF 244 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEES-SCEEEEEEETTEEEEEEEEECS-CTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEE
T ss_pred cceEEEEECCCCceEEeecCC-ccccccEECCCCCCEEEEEEec-CCCCCcceEEEEeCCCCceEEeeeCCCCcccccce
Confidence 358999999988765553222 1122222222 34433332222 12223457999999887766664422111111112
Q ss_pred EE-CCE-EEEEeCccCCCccCCceEEEeCCCCceeecccCccCC------cceEEEEECC-eEEEEe-------eCCCcc
Q 017349 225 VM-GSK-MYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEG------WTGISIVLEG-KLFVIS-------EHGDCP 288 (373)
Q Consensus 225 ~~-~~~-lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~------~~~~~~~~~~-~l~v~g-------g~~~~~ 288 (373)
.. +|+ |+...... ......++++|+.+++-+.+.. .+.. ..+....-+| .|++.. +.....
T Consensus 245 ~spdg~~l~~~~~~~--~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 321 (388)
T 3pe7_A 245 WVPDGSALVYVSYLK--GSPDRFIYSADPETLENRQLTS-MPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPF 321 (388)
T ss_dssp ECTTSSCEEEEEEET--TCCCEEEEEECTTTCCEEEEEE-ECCEEEEEECTTSSEEEEEECCC------------CCCCE
T ss_pred ECCCCCEEEEEecCC--CCCcceEEEEecCCCceEEEEc-CCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCE
Confidence 22 555 54443221 1111249999999987655533 1110 0011122233 333321 022458
Q ss_pred eEEEeCCCCceeeecC
Q 017349 289 MKQYNPDDDTWRYVGG 304 (373)
Q Consensus 289 ~~~yd~~~~~W~~~~~ 304 (373)
++++|+++++-..+..
T Consensus 322 i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 322 LYVFNMKNGTQHRVAR 337 (388)
T ss_dssp EEEEETTTTEEEEEEE
T ss_pred EEEEeccCCceEEecc
Confidence 9999999887776653
No 203
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.98 E-value=0.83 Score=39.27 Aligned_cols=118 Identities=16% Similarity=0.141 Sum_probs=56.6
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccC--CCCC--CcceeEE
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRS--DTET--PMQSTIM 151 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~--~~~~--~~~~~~~ 151 (373)
.+..+|+... ....+.++|+.+.+-...-..+.+........+.+....++.+|+...... .... ....+++
T Consensus 44 dg~~l~v~~~----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v 119 (337)
T 1pby_B 44 GGRIAYATVN----KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119 (337)
T ss_dssp TSSEEEEEET----TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred CCCEEEEEeC----CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEE
Confidence 3457777653 234588899988765432222210000001122333332447777642100 0000 1357999
Q ss_pred EeCCCCceeccCCCCCcceeeeeeEe-C-CeEEEEcCCCCCCCCcCceEEEEeCCCCeEE
Q 017349 152 YRATTNQWQLASPMLTPRSFFASGNV-N-GKIMAVGGTGANINETMTAVECYDPESDTWT 209 (373)
Q Consensus 152 yd~~t~~W~~~~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 209 (373)
||..+.+....-.. ......++.. + ..+|+.+ ..+.++|..+++-.
T Consensus 120 ~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~----------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 120 YDAETLSRRKAFEA--PRQITMLAWARDGSKLYGLG----------RDLHVMDPEAGTLV 167 (337)
T ss_dssp EETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEES----------SSEEEEETTTTEEE
T ss_pred EECCCCcEEEEEeC--CCCcceeEECCCCCEEEEeC----------CeEEEEECCCCcEe
Confidence 99988764432111 1112222222 3 4466662 24889999887643
No 204
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.96 E-value=1.5 Score=37.17 Aligned_cols=106 Identities=8% Similarity=0.104 Sum_probs=52.1
Q ss_pred CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCcee
Q 017349 178 NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWN 257 (373)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~ 257 (373)
++..++.++.+ ..+.+||..... ..+..............-++. ++.|+.+ ..+.+||..+++-.
T Consensus 154 ~~~~l~~~~~d-------~~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~d------g~i~i~d~~~~~~~ 218 (313)
T 3odt_A 154 SENKFLTASAD-------KTIKLWQNDKVI-KTFSGIHNDVVRHLAVVDDGH-FISCSND------GLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTEEEEEETT-------SCEEEEETTEEE-EEECSSCSSCEEEEEEEETTE-EEEEETT------SEEEEEETTTCCEE
T ss_pred CCCEEEEEECC-------CCEEEEecCceE-EEEeccCcccEEEEEEcCCCe-EEEccCC------CeEEEEECCchhhh
Confidence 56666666654 347788833221 222111111111222233667 5566554 57899999876532
Q ss_pred ecccCccCCcceEEEEE-CCeEEEEeeCCCcceEEEeCCCCceee
Q 017349 258 LMSDGMKEGWTGISIVL-EGKLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 258 ~~~~~~~~~~~~~~~~~-~~~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
..-........ ..+.. +++ ++.|+. ...+..||..+.+...
T Consensus 219 ~~~~~~~~~i~-~~~~~~~~~-l~~~~~-dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 219 RTYEGHESFVY-CIKLLPNGD-IVSCGE-DRTVRIWSKENGSLKQ 260 (313)
T ss_dssp EEEECCSSCEE-EEEECTTSC-EEEEET-TSEEEEECTTTCCEEE
T ss_pred hhhhcCCceEE-EEEEecCCC-EEEEec-CCEEEEEECCCCceeE
Confidence 21111111111 11222 454 444443 6689999998776443
No 205
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.93 E-value=0.86 Score=44.54 Aligned_cols=154 Identities=9% Similarity=-0.048 Sum_probs=82.8
Q ss_pred EEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCC--CCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCce
Q 017349 122 ACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASP--MLTPRSFFASGN--VNGKIMAVGGTGANINETMTA 197 (373)
Q Consensus 122 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 197 (373)
+.++...++.||+.-. ....++++++....-+.+.. +..|+ ++++ .++.||+..-. ....
T Consensus 457 glavD~~~g~LY~tD~-------~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~------~~~~ 520 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDS-------VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG------TPAK 520 (699)
T ss_dssp CEECCCSSSBCEECCT-------TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS------SSCC
T ss_pred eEEEEeeCCcEEEEec-------cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC------CCCe
Confidence 4444334788998632 23468999987765444322 22222 2233 36778875311 1245
Q ss_pred EEEEeCCCCeEEeccCCccccccc-cEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeeccc-CccCCcceEEEE
Q 017349 198 VECYDPESDTWTTAAKLRMGLARY-DSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGISIV 273 (373)
Q Consensus 198 ~~~yd~~t~~W~~~~~~~~~~~~~-~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~ 273 (373)
++++++....-+.+..- ....+ ++++- +++||+.-... ..|+++|+....-+.+.. ......-...++
T Consensus 521 I~~~~~dG~~~~~l~~~--~l~~PnGlavd~~~~~LY~aD~~~------~~I~~~d~dG~~~~~~~~~~~~~~~P~glav 592 (699)
T 1n7d_A 521 IKKGGLNGVDIYSLVTE--NIQWPNGITLDLLSGRLYWVDSKL------HSISSIDVNGGNRKTILEDEKRLAHPFSLAV 592 (699)
T ss_dssp EEBCCSSSCCCCEESCS--SCSSCCCEEECTTTCCEEEEETTT------TEEEEECSSSSCCEEECCCSSSCSSCCCCEE
T ss_pred EEEEeCCCCCeeEEEeC--CCCCccEEEEeccCCEEEEEecCC------CeEEEEccCCCceEEEEecCCcCCCceEeEE
Confidence 77777764433322111 11122 23332 57899886433 679999987543333221 111111112255
Q ss_pred ECCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 274 LEGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 274 ~~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
.++.||+... ....|.++|+.+++-.
T Consensus 593 d~~~lywtd~-~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 593 FEDKVFWTDI-INEAIFSANRLTGSDV 618 (699)
T ss_dssp ETTEEEEECS-TTTCEEEEETTTEEEE
T ss_pred ECCEEEEEeC-CCCeEEEEEccCCCce
Confidence 7889999873 3678999998765433
No 206
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=94.91 E-value=1.2 Score=36.02 Aligned_cols=140 Identities=11% Similarity=0.093 Sum_probs=77.7
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCcee--cc----CCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEE
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQ--LA----SPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVEC 200 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~--~~----~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 200 (373)
++.+|+|-|. .+|+++.....+. .+ +.+|. .--++... ++++|+|-|.. .++
T Consensus 33 ~g~~y~Fkg~---------~~wr~~~~~~~~~p~~I~~~wp~Lp~--~iDAa~~~~~~~~iyfFkG~~---------~w~ 92 (207)
T 1pex_A 33 RGETMIFKDR---------FFWRLHPQQVDAELFLTKSFWPELPN--RIDAAYEHPSHDLIFIFRGRK---------FWA 92 (207)
T ss_dssp TTEEEEEETT---------EEEEECSSSSCCEEEEHHHHCTTSCS--SCCEEEEETTTTEEEEEETTE---------EEE
T ss_pred CCcEEEEECC---------EEEEEeCCCcCCCceehhHhccCCCC--CccEEEEeccCCcEEEEccCE---------EEE
Confidence 8999999764 5777775443221 11 12221 12222223 58999997753 677
Q ss_pred EeCCCCe--E-EeccC--CccccccccEEEE---CCEEEEEeCccCCCccCCceEEEeCCCCceee-----ccc---Ccc
Q 017349 201 YDPESDT--W-TTAAK--LRMGLARYDSAVM---GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-----MSD---GMK 264 (373)
Q Consensus 201 yd~~t~~--W-~~~~~--~~~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-----~~~---~~~ 264 (373)
|+..+-. + +.+.. +|.....--+|+. ++++|+|-| +..++||..+++=.. +.. .++
T Consensus 93 ~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip 164 (207)
T 1pex_A 93 LNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG 164 (207)
T ss_dssp ESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEEETTTTEECSSCCCBHHHHSTTSC
T ss_pred EeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEEeCcCccccCCCCccHHHcCCCCC
Confidence 7643211 1 22322 2321122234443 489999987 468999987653211 100 112
Q ss_pred CCcceEEEEECCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 265 EGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 265 ~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
. ...++...+|++|.+-|. ..++||..+++-.
T Consensus 165 ~-~iDaAf~~~g~~YfFkg~---~y~rf~~~~~~v~ 196 (207)
T 1pex_A 165 D-KVDAVYEKNGYIYFFNGP---IQFEYSIWSNRIV 196 (207)
T ss_dssp S-CCSEEEEETTEEEEEETT---EEEEEETTTTEEE
T ss_pred C-CccEEEEcCCcEEEEECC---EEEEEeCCccEEe
Confidence 2 233445569999999775 8999998776543
No 207
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.90 E-value=1.9 Score=38.07 Aligned_cols=187 Identities=10% Similarity=-0.039 Sum_probs=103.2
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+.. .....++++++.......+..... ..-.+.++...++.||+.-.. .+.++++++..
T Consensus 84 ~~~ly~~D----~~~~~I~r~~~~g~~~~~~~~~~~-----~~p~glavd~~~g~ly~~d~~-------~~~I~~~~~dG 147 (349)
T 3v64_C 84 RELVFWSD----VTLDRILRANLNGSNVEEVVSTGL-----ESPGGLAVDWVHDKLYWTDSG-------TSRIEVANLDG 147 (349)
T ss_dssp TTEEEEEE----TTTTEEEEEETTSCSCEEEECSSC-----SCCCEEEEETTTTEEEEEETT-------TTEEEEEETTS
T ss_pred ccEEEEEe----ccCCceEEEecCCCCceEEEeCCC-----CCccEEEEecCCCeEEEEcCC-------CCeEEEEcCCC
Confidence 56666653 223457788877665444322110 022455665458999998532 34789999876
Q ss_pred CceeccC--CCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccc-cEEEE--CCE
Q 017349 157 NQWQLAS--PMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARY-DSAVM--GSK 229 (373)
Q Consensus 157 ~~W~~~~--~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~-~~~~~--~~~ 229 (373)
..-+.+. .+..| .++++. ++.||+..-. ....++++++....-+.+.. .....+ +.++- +++
T Consensus 148 ~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~------~~~~I~r~~~dG~~~~~~~~--~~~~~PnGla~d~~~~~ 216 (349)
T 3v64_C 148 AHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWG------NTPRIEASSMDGSGRRIIAD--THLFWPNGLTIDYAGRR 216 (349)
T ss_dssp CSCEEEECTTCSCE---EEEEEETTTTEEEEEECS------SSCEEEEEETTSCSCEESCC--SSCSCEEEEEEETTTTE
T ss_pred CceEEEEeCCCCCc---ceEEEecCcCeEEEeccC------CCCEEEEEeCCCCCcEEEEE--CCCCCcceEEEeCCCCE
Confidence 5433332 22222 233443 6888887422 13579999987654444321 111122 23332 688
Q ss_pred EEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 230 MYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 230 lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
||+.-... ..|+++|+....-+.+.. .....-...++.++.||+.... ...|.++|..+++
T Consensus 217 lY~aD~~~------~~I~~~~~dG~~~~~~~~-~~~~~P~giav~~~~ly~td~~-~~~V~~~~~~~G~ 277 (349)
T 3v64_C 217 MYWVDAKH------HVIERANLDGSHRKAVIS-QGLPHPFAITVFEDSLYWTDWH-TKSINSANKFTGK 277 (349)
T ss_dssp EEEEETTT------TEEEEEETTSCSCEEEEC-SSCSSEEEEEEETTEEEEEETT-TTEEEEEETTTCC
T ss_pred EEEEECCC------CEEEEEeCCCCceEEEEe-CCCCCceEEEEECCEEEEecCC-CCeEEEEEccCCC
Confidence 99985432 689999986533222211 1111112224589999998643 6689999965543
No 208
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.89 E-value=0.65 Score=41.14 Aligned_cols=197 Identities=10% Similarity=0.008 Sum_probs=93.6
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEecc-CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPR-QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS 170 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 170 (373)
..++.+|+.+.+-..+..-+ .......+.. +++.+++.... ........++.+|..+...+.+........
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~-------~~~~~~~~sp~dg~~l~~~~~~-~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQEN-------QWLGHPIYRPYDDSTVAFCHEG-PHDLVDARMWLINEDGTNMRKVKTHAEGES 239 (388)
T ss_dssp EEEEEEETTTCCEEEEEEES-------SCEEEEEEETTEEEEEEEEECS-CTTTSSCSEEEEETTSCCCEESCCCCTTEE
T ss_pred ceEEEEECCCCceEEeecCC-------ccccccEECCCCCCEEEEEEec-CCCCCcceEEEEeCCCCceEEeeeCCCCcc
Confidence 56888998888766553222 2233344444 45443332221 111234589999998877666644321111
Q ss_pred eeeeeE-eCCe-EEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccc-----ccccEEEECCE-EEEEeCcc--CCC
Q 017349 171 FFASGN-VNGK-IMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGL-----ARYDSAVMGSK-MYVTEGWT--WPF 240 (373)
Q Consensus 171 ~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~-----~~~~~~~~~~~-lyv~gG~~--~~~ 240 (373)
...... -+++ |+...... ......++++|+.+++-+.+..++... .......-+|+ |++..... ...
T Consensus 240 ~~~~~~spdg~~l~~~~~~~---~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 316 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLK---GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKI 316 (388)
T ss_dssp EEEEEECTTSSCEEEEEEET---TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------
T ss_pred cccceECCCCCEEEEEecCC---CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeecccccc
Confidence 112222 2444 54443221 112235999999998876665443310 00112223333 33221000 000
Q ss_pred ccCCceEEEeCCCCceeecccCccC----------CcceEEEEECCe-EEEEeeC-CCcceEEEeCCCCce
Q 017349 241 MFSPRGGVYDINKDTWNLMSDGMKE----------GWTGISIVLEGK-LFVISEH-GDCPMKQYNPDDDTW 299 (373)
Q Consensus 241 ~~~~~i~~yd~~~~~W~~~~~~~~~----------~~~~~~~~~~~~-l~v~gg~-~~~~~~~yd~~~~~W 299 (373)
.....++++|+.+++-+.+...... .....+..-+|+ |+..... +...++.+|+....|
T Consensus 317 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 317 ENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPESVW 387 (388)
T ss_dssp CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGGGG
T ss_pred CCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChhcc
Confidence 1225799999998877665432110 011112223555 4444322 245788888877666
No 209
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.89 E-value=1.7 Score=38.62 Aligned_cols=166 Identities=11% Similarity=0.062 Sum_probs=83.5
Q ss_pred eeEEEeCCCCceeccC--CCCCcce--eeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCccccc
Q 017349 148 STIMYRATTNQWQLAS--PMLTPRS--FFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRMGLA 219 (373)
Q Consensus 148 ~~~~yd~~t~~W~~~~--~~~~~r~--~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~ 219 (373)
.+.+||..+++-...- ..+.... ...+.. .++.+++.|+.+ ..+.+||..... -+.+ .....
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-------~~v~~wd~~~~~~~~~~~---~~h~~ 250 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-------TTVRLWDLRITSRAVRTY---HGHEG 250 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-------SCEEEEETTTTCCCCEEE---CCCSS
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-------CeEEEEECCCCCcceEEE---CCcCC
Confidence 5788898887543221 1111111 111222 256778888775 358888876331 1111 11111
Q ss_pred cccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeec-ccCc---c--CC-cceEEEEECCeEEEEeeCCCcceE
Q 017349 220 RYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLM-SDGM---K--EG-WTGISIVLEGKLFVISEHGDCPMK 290 (373)
Q Consensus 220 ~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~-~~~~---~--~~-~~~~~~~~~~~l~v~gg~~~~~~~ 290 (373)
.-..+.+ ++..++.|+.+ ..+.+||+.++.-... .... . .+ ....+..-++++++.|+. ...+.
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-dg~i~ 323 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDD------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS-NGDCY 323 (380)
T ss_dssp CCCEEEECTTSSEEEEECSS------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-TSCEE
T ss_pred CeEEEEEecCCCeEEEEcCC------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC-CCCEE
Confidence 1112222 67777788776 5789999988753221 1100 0 01 111122336777777654 67899
Q ss_pred EEeCCCCcee-eecCCCCCCcccccceEEEEeCCEEEEEeCC
Q 017349 291 QYNPDDDTWR-YVGGDKFPCEVMHRPFAVNGVEGKIYVVSSG 331 (373)
Q Consensus 291 ~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG~ 331 (373)
+||..+.+-. .+..+... +...-.......+++.++.|+.
T Consensus 324 vwd~~~~~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 324 VWDTLLAEMVLNLGTLQNS-HEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp EEETTTCCEEEEECCSCSS-CCCCCCEEEECSSSSEEEEECT
T ss_pred EEECCCCceEEEEecccCC-CCCceEEEEECCCCCEEEEeeC
Confidence 9998766543 22221111 1112222234457788888874
No 210
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.85 E-value=2.6 Score=39.51 Aligned_cols=177 Identities=10% Similarity=0.135 Sum_probs=83.8
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEE
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
+..+..++..++.|+.+ ..+.+||.....-..+.... ..-.+++. -+++.++.|+.+ ..+.+|
T Consensus 349 ~~~~s~~g~~l~~~~~d-------g~v~~~~~~~~~~~~~~~~~--~~v~~~~~s~dg~~l~~~~~d-------~~v~~~ 412 (577)
T 2ymu_A 349 GVAFSPDGQTIASASDD-------KTVKLWNRNGQLLQTLTGHS--SSVRGVAFSPDGQTIASASDD-------KTVKLW 412 (577)
T ss_dssp EEEECTTSSEEEEEETT-------SEEEEEETTCCEEEEEECCS--SCEEEEEECTTSSCEEEEETT-------SEEEEE
T ss_pred EEEECCCCCEEEEEeCC-------CEEEEEcCCCCEEEEecCCC--CCeEEEEECCCCCEEEEEeCC-------CEEEEE
Confidence 33444466777776542 25778886443332222111 11111222 255666666654 357788
Q ss_pred eCCCCeEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEE
Q 017349 202 DPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFV 280 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v 280 (373)
|.....-+.+.....+ -.+.+.. ++++++.++.+ ..+..||.....-..+.. ........+..-++++++
T Consensus 413 ~~~~~~~~~~~~~~~~--v~~~~~s~d~~~l~~~~~d------~~v~~w~~~~~~~~~~~~-~~~~v~~~~~spd~~~la 483 (577)
T 2ymu_A 413 NRNGQLLQTLTGHSSS--VWGVAFSPDDQTIASASDD------KTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIA 483 (577)
T ss_dssp CTTCCEEEEEECCSSC--EEEEEECTTSSEEEEEETT------SEEEEEETTSCEEEEEEC-CSSCEEEEEECTTSCEEE
T ss_pred eCCCCEEEEecCCCCC--eEEEEECCCCCEEEEEcCC------CEEEEEECCCCEEEEEcC-CCCCEEEEEEcCCCCEEE
Confidence 8544433322211111 0112222 56677777655 468888875544333321 111111111223677777
Q ss_pred EeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEE-EEeCCEEEEEeCC
Q 017349 281 ISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAV-NGVEGKIYVVSSG 331 (373)
Q Consensus 281 ~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~GG~ 331 (373)
.++. ...+..||...+.-..+.. .. ..-.++ ...++++++.|+.
T Consensus 484 s~~~-d~~i~iw~~~~~~~~~~~~--h~----~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 484 SASD-DKTVKLWNRNGQLLQTLTG--HS----SSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp EEET-TSEEEEEETTSCEEEEEEC--CS----SCEEEEEECTTSSCEEEEET
T ss_pred EEeC-CCEEEEEcCCCCEEEEEeC--CC----CCEEEEEEcCCCCEEEEEEC
Confidence 7765 5678889875443333321 11 111222 2346666666663
No 211
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=94.72 E-value=1.3 Score=39.40 Aligned_cols=122 Identities=10% Similarity=0.009 Sum_probs=69.2
Q ss_pred cCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEE-EeCC-----CCe-EEeccC-CccccccccEEEECCEEEEE
Q 017349 162 ASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVEC-YDPE-----SDT-WTTAAK-LRMGLARYDSAVMGSKMYVT 233 (373)
Q Consensus 162 ~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~-yd~~-----t~~-W~~~~~-~~~~~~~~~~~~~~~~lyv~ 233 (373)
++..+..-.-|+.+.+++.-|++|-.. ++....++-. |-+. ... =+.++. .....+-++.-.++|.||+.
T Consensus 277 L~~i~~vTe~HSFa~i~~~~fa~GyHn--GDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvLyLt 354 (670)
T 3ju4_A 277 LGLIPSVTEVHSFATIDNNGFAMGYHQ--GDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLI 354 (670)
T ss_dssp CCSCTTCSEEEEEEECSSSCEEEEEEE--CSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEEEEE
T ss_pred cccccceeeeeeeeEecCCceEEEecc--CCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCEEEEE
Confidence 455565566788888888888888665 3333333332 2111 111 223321 11111223344569999998
Q ss_pred eCccCCCccCCceEEEeCCCCceeecccCccCCcceE-EEEECCeEEEEeeCC
Q 017349 234 EGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI-SIVLEGKLFVISEHG 285 (373)
Q Consensus 234 gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~~~l~v~gg~~ 285 (373)
.-...+...-..+.+-+..-..|..+.-|..-..... .+..++.||++|...
T Consensus 355 TRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 355 TRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp EEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECS
T ss_pred ecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccc
Confidence 6433233444566777777788998875432222222 277899999998643
No 212
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.67 E-value=1.2 Score=39.32 Aligned_cols=149 Identities=7% Similarity=-0.120 Sum_probs=78.9
Q ss_pred cceeEEEeCCCCceeccCCCCCcceeeeeeEe--CC-eEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccc-
Q 017349 146 MQSTIMYRATTNQWQLASPMLTPRSFFASGNV--NG-KIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARY- 221 (373)
Q Consensus 146 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~- 221 (373)
...++++|..+++.+.+... .......... ++ +|+.... . ........++.+|..+..++.+.. ..+....
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~-~-~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~ 241 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHE-G-PHDLVDARMWLVNEDGSNVRKIKE-HAEGESCT 241 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEEC-S-CSSSCSCCCEEEETTSCCCEESSC-CCTTEEEE
T ss_pred cceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEec-C-CCCCCCceEEEEECCCCceeEeec-cCCCcccc
Confidence 45789999998877665421 1111122222 23 3544432 1 122223578999998888777654 1111111
Q ss_pred cEEEE-CCE-EEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE-CCeEEEEeeC--------------
Q 017349 222 DSAVM-GSK-MYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL-EGKLFVISEH-------------- 284 (373)
Q Consensus 222 ~~~~~-~~~-lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~l~v~gg~-------------- 284 (373)
..+.. +|+ |++..... ......++++|+.+++.+.+.. .+. . .....- +|+++++++.
T Consensus 242 ~~~~spdg~~l~~~~~~~--~~~~~~l~~~d~~~g~~~~l~~-~~~-~-~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFK--GQTDRVIYKANPETLENEEVMV-MPP-C-SHLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp EEEECTTSSCEEEEEEET--TTCCEEEEEECTTTCCEEEEEE-CCS-E-EEEEECSSSSEEEEEECCC----------CC
T ss_pred ceEECCCCCEEEEEecCC--CCccceEEEEECCCCCeEEeee-CCC-C-CCCccCCCCceEEEecCCcceeecccccccc
Confidence 12222 555 44443221 1111349999999887766543 211 1 122333 7777766432
Q ss_pred -CCcceEEEeCCCCceeeecC
Q 017349 285 -GDCPMKQYNPDDDTWRYVGG 304 (373)
Q Consensus 285 -~~~~~~~yd~~~~~W~~~~~ 304 (373)
....++.+|+.+++...+..
T Consensus 317 ~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 317 ENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp CCCCEEEEEETTTTBCCEEEE
T ss_pred CCCCcEEEEecccCceEEccC
Confidence 23579999998887766653
No 213
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=94.66 E-value=1.9 Score=37.03 Aligned_cols=155 Identities=10% Similarity=0.111 Sum_probs=76.3
Q ss_pred EEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEE
Q 017349 122 ACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 122 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
.+..+..++..++.|+.+ ..+..++.........................+..++.|+.+ ..+.++
T Consensus 90 ~~~~~s~dg~~l~s~~~d-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-------~~~~~~ 155 (340)
T 4aow_A 90 SDVVISSDGQFALSGSWD-------GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-------KTIKLW 155 (340)
T ss_dssp EEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-------SCEEEE
T ss_pred EEEEECCCCCEEEEEccc-------ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-------CeEEEE
Confidence 344444567777777652 157788877765443322222222222222244555556554 246677
Q ss_pred eCCCCeEEeccCCccccccccEEEE----CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCe
Q 017349 202 DPESDTWTTAAKLRMGLARYDSAVM----GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGK 277 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~~~~~~~~~~----~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 277 (373)
|.....-..... .........+.+ .+.+++.++.+ ..+..||..+.+-...-..........+..-+++
T Consensus 156 d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~s~~~d------~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~ 228 (340)
T 4aow_A 156 NTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGWD------KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 228 (340)
T ss_dssp CTTSCEEEEECS-SSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred EeCCCceEEEEe-ccccCcccceEEccCCCCcEEEEEcCC------CEEEEEECCCCceeeEecCCCCcEEEEEECCCCC
Confidence 776553222211 111111111111 23455666655 5688999988764332211111111111222577
Q ss_pred EEEEeeCCCcceEEEeCCCCc
Q 017349 278 LFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 278 l~v~gg~~~~~~~~yd~~~~~ 298 (373)
+++.|+. ...+..||..+.+
T Consensus 229 ~l~s~s~-Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 229 LCASGGK-DGQAMLWDLNEGK 248 (340)
T ss_dssp EEEEEET-TCEEEEEETTTTE
T ss_pred EEEEEeC-CCeEEEEEeccCc
Confidence 7777775 5688899987653
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.62 E-value=3.6 Score=40.03 Aligned_cols=198 Identities=13% Similarity=0.093 Sum_probs=99.2
Q ss_pred CceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCC-----CCCCcceeEEEeCCCCcee--cc
Q 017349 90 ARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSD-----TETPMQSTIMYRATTNQWQ--LA 162 (373)
Q Consensus 90 ~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~-----~~~~~~~~~~yd~~t~~W~--~~ 162 (373)
...+++++|..+++.... .++ . ..+.......+..||........ .......+++++..+..=. .+
T Consensus 153 ~~~~i~v~dl~tg~~~~~-~~~--~----~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v 225 (693)
T 3iuj_A 153 DWREIHLMDVESKQPLET-PLK--D----VKFSGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLV 225 (693)
T ss_dssp CEEEEEEEETTTCSEEEE-EEE--E----EESCCCEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEE
T ss_pred ceEEEEEEECCCCCCCcc-ccC--C----ceeccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEE
Confidence 346788999999886553 111 0 10111122214455554322100 0022457899988776532 22
Q ss_pred CCCCC--cceeeeee-EeCCeEEEEcCCCCCCCCcCceEEEEeCCCC--eEEeccCCccccccccEEEECCEEEEEeCcc
Q 017349 163 SPMLT--PRSFFASG-NVNGKIMAVGGTGANINETMTAVECYDPESD--TWTTAAKLRMGLARYDSAVMGSKMYVTEGWT 237 (373)
Q Consensus 163 ~~~~~--~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~ 237 (373)
...+. +....+.. .-+++..++.... ....+.++++|..+. .|+.+..-...... .....++.||+....+
T Consensus 226 ~~~~~~~~~~~~~~~~SpDg~~l~~~~~~---~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~ 301 (693)
T 3iuj_A 226 FGAIPAQHHRYVGATVTEDDRFLLISAAN---STSGNRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRD 301 (693)
T ss_dssp ESCSGGGCCSEEEEEECTTSCEEEEEEES---SSSCCEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTT
T ss_pred EecCCCCCeEEEEEEEcCCCCEEEEEEcc---CCCCcEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCC
Confidence 22221 22122222 2245433332221 112368999998765 67766432221111 1234478898887543
Q ss_pred CCCccCCceEEEeCCCC---ceeecccCccCCcceEEEEECCeEEEEeeCC-CcceEEEeCCCCceeeec
Q 017349 238 WPFMFSPRGGVYDINKD---TWNLMSDGMKEGWTGISIVLEGKLFVISEHG-DCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 238 ~~~~~~~~i~~yd~~~~---~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~-~~~~~~yd~~~~~W~~~~ 303 (373)
.....++.+|+.+. .|+.+...... .. .....++.|++....+ ...++++|.+.+....+.
T Consensus 302 ---~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 302 ---APNRRLVTVDAANPGPAHWRDLIPERQQ-VL-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp ---CTTCEEEEEETTSCCGGGCEEEECCCSS-CE-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEEC
T ss_pred ---CCCCEEEEEeCCCCCccccEEEecCCCC-EE-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEee
Confidence 22357899998764 48765431222 22 2244567776654332 347889998866555553
No 215
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=94.62 E-value=1.1 Score=36.87 Aligned_cols=140 Identities=9% Similarity=0.020 Sum_probs=76.7
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEeC---------------CCCceeccCCCCCcceee-eeeE-eCCeEEEEcCCCCC
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYRA---------------TTNQWQLASPMLTPRSFF-ASGN-VNGKIMAVGGTGAN 190 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd~---------------~t~~W~~~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~ 190 (373)
.++.+|+|-|. .+|+++. .+..|..+|..+...... ++.. .++++|+|-|..
T Consensus 12 ~~ge~~fFk~~---------~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg~~-- 80 (225)
T 3oyo_A 12 SEYEVYFFAKN---------KYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSGNH-- 80 (225)
T ss_dssp STTEEEEEETT---------EEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEETTE--
T ss_pred CCCEEEEEECC---------EEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcCCE--
Confidence 37999999764 4666661 223455554322211222 2222 579999998753
Q ss_pred CCCcCceEEEEeCCCC--eEEec----------cCCccc--cccccEEEE---CCEEEEEeCccCCCccCCceEEEeCCC
Q 017349 191 INETMTAVECYDPESD--TWTTA----------AKLRMG--LARYDSAVM---GSKMYVTEGWTWPFMFSPRGGVYDINK 253 (373)
Q Consensus 191 ~~~~~~~~~~yd~~t~--~W~~~----------~~~~~~--~~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~~yd~~~ 253 (373)
.++||..++ .-+.. +.+|.. ...--++.. ++++|+|-| +..++||..+
T Consensus 81 -------~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG--------~~yw~~d~~~ 145 (225)
T 3oyo_A 81 -------SAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG--------NKYVRIAYDS 145 (225)
T ss_dssp -------EEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET--------TEEEEEETTT
T ss_pred -------EEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC--------CeEEEEECCC
Confidence 788865332 11111 122221 002224433 689999987 4588999766
Q ss_pred CceeecccC----cc-------CCcceEEEE--ECCeEEEEeeCCCcceEEEeCCC
Q 017349 254 DTWNLMSDG----MK-------EGWTGISIV--LEGKLFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 254 ~~W~~~~~~----~~-------~~~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~ 296 (373)
++-..-+.+ .+ .....++.. .++++|.+-|. ..|+||..+
T Consensus 146 ~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~---~ywr~d~~~ 198 (225)
T 3oyo_A 146 KQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ---NYVRIDFTP 198 (225)
T ss_dssp TEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT---EEEEEECCT
T ss_pred CeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC---EEEEEeCCc
Confidence 654321110 11 112223333 37999999876 899999983
No 216
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=94.60 E-value=0.55 Score=42.08 Aligned_cols=151 Identities=13% Similarity=0.169 Sum_probs=78.3
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEE
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
+..+..++..++.|+.+ ..+.+||..+++-...-.- ....-.++... ++..++.|+.+ ..+.+|
T Consensus 128 ~v~~s~dg~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d-------~~v~iw 192 (393)
T 1erj_A 128 SVCFSPDGKFLATGAED-------RLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD-------RTVRIW 192 (393)
T ss_dssp EEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT-------SEEEEE
T ss_pred EEEECCCCCEEEEEcCC-------CeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC-------CcEEEE
Confidence 34444577777777652 2688999887754322111 11111222222 45555666654 468899
Q ss_pred eCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceee-cccCc---cCCcce-EEEEE
Q 017349 202 DPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-MSDGM---KEGWTG-ISIVL 274 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-~~~~~---~~~~~~-~~~~~ 274 (373)
|..+++....-.... .....+.. ++++++.|+.+ ..+.+||..++.-.. +.... ...... .++.+
T Consensus 193 d~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~s~d------~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 264 (393)
T 1erj_A 193 DLRTGQCSLTLSIED--GVTTVAVSPGDGKYIAAGSLD------RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF 264 (393)
T ss_dssp ETTTTEEEEEEECSS--CEEEEEECSTTCCEEEEEETT------SCEEEEETTTCCEEEEEC------CCCSSCEEEEEE
T ss_pred ECCCCeeEEEEEcCC--CcEEEEEECCCCCEEEEEcCC------CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEE
Confidence 998876543211111 11122222 57777788766 578999998775322 11100 011111 11222
Q ss_pred --CCeEEEEeeCCCcceEEEeCCCC
Q 017349 275 --EGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 275 --~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
++++++.|+. ...+..||..+.
T Consensus 265 ~~~g~~l~s~s~-d~~v~~wd~~~~ 288 (393)
T 1erj_A 265 TRDGQSVVSGSL-DRSVKLWNLQNA 288 (393)
T ss_dssp CTTSSEEEEEET-TSEEEEEEC---
T ss_pred CCCCCEEEEEeC-CCEEEEEECCCC
Confidence 5677777765 567888888653
No 217
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.58 E-value=1.8 Score=40.62 Aligned_cols=177 Identities=10% Similarity=0.136 Sum_probs=84.7
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEE
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
+..+..+++.++.|+.+ ..+.+||.....-..+.... ..-..++. -+++.++.++.+ ..+.+|
T Consensus 390 ~~~~s~dg~~l~~~~~d-------~~v~~~~~~~~~~~~~~~~~--~~v~~~~~s~d~~~l~~~~~d-------~~v~~w 453 (577)
T 2ymu_A 390 GVAFSPDGQTIASASDD-------KTVKLWNRNGQLLQTLTGHS--SSVWGVAFSPDDQTIASASDD-------KTVKLW 453 (577)
T ss_dssp EEEECTTSSCEEEEETT-------SEEEEECTTCCEEEEEECCS--SCEEEEEECTTSSEEEEEETT-------SEEEEE
T ss_pred EEEECCCCCEEEEEeCC-------CEEEEEeCCCCEEEEecCCC--CCeEEEEECCCCCEEEEEcCC-------CEEEEE
Confidence 34444466666666542 25778885433222221111 11112222 256666666654 357888
Q ss_pred eCCCCeEEeccCCccccccccEEE-ECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEE
Q 017349 202 DPESDTWTTAAKLRMGLARYDSAV-MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFV 280 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v 280 (373)
|.....-..+.....+ -.+++. -++++++.++.+ ..+.+||.....-..+.. ........+..-++++++
T Consensus 454 ~~~~~~~~~~~~~~~~--v~~~~~spd~~~las~~~d------~~i~iw~~~~~~~~~~~~-h~~~v~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 454 NRNGQLLQTLTGHSSS--VRGVAFSPDGQTIASASDD------KTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIA 524 (577)
T ss_dssp ETTSCEEEEEECCSSC--EEEEEECTTSCEEEEEETT------SEEEEEETTSCEEEEEEC-CSSCEEEEEECTTSSCEE
T ss_pred ECCCCEEEEEcCCCCC--EEEEEEcCCCCEEEEEeCC------CEEEEEcCCCCEEEEEeC-CCCCEEEEEEcCCCCEEE
Confidence 8765544333221111 111222 267777777665 568888864433222221 111111111223677777
Q ss_pred EeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEE-EEeCCEEEEEeCC
Q 017349 281 ISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAV-NGVEGKIYVVSSG 331 (373)
Q Consensus 281 ~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~~l~i~GG~ 331 (373)
.++. ...+..||...+....+.. .. ..-.++ ...+++.++.||.
T Consensus 525 s~~~-dg~v~lwd~~~~~~~~~~~--h~----~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 525 SASD-DKTVKLWNRNGQLLQTLTG--HS----SSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp EEET-TSEEEEECTTSCEEEEEEC--CS----SCEEEEEECTTSSCEEEEET
T ss_pred EEEC-cCEEEEEeCCCCEEEEEcC--CC----CCEEEEEEcCCCCEEEEEeC
Confidence 7665 5578899975544444331 11 111223 3346776677664
No 218
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.58 E-value=3.6 Score=39.89 Aligned_cols=118 Identities=20% Similarity=0.216 Sum_probs=66.3
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCC--eeeCCCCCCCCC--C-C-CCceEEEEeccCCEEEEEcCccCCCCCCccee
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGR--WFVLPPMPCPKA--V-C-PQAFACTSLPRQGKLFVLGGMRSDTETPMQST 149 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~--~-~-~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~ 149 (373)
.++.+|+... ...++.+|..+.+ |+.-...+.... . + ....+.++. +++||+... ...+
T Consensus 65 ~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~--------dg~l 129 (668)
T 1kv9_A 65 HDGVIYTSMS-----WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGTL--------DGRL 129 (668)
T ss_dssp ETTEEEEEEG-----GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEECT--------TSEE
T ss_pred ECCEEEEECC-----CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CCEEEEEcC--------CCEE
Confidence 4788888653 3468889987765 776443321000 0 0 011223334 788887642 1379
Q ss_pred EEEeCCCCc--eeccCCCCC--cceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEe
Q 017349 150 IMYRATTNQ--WQLASPMLT--PRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTT 210 (373)
Q Consensus 150 ~~yd~~t~~--W~~~~~~~~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~ 210 (373)
+.+|..|++ |+.-..-+. .....+.++.++++|+..+.. .......++.||..|++ |+.
T Consensus 130 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~--~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGA--EYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCT--TTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCC--CcCCCCEEEEEECCCCcEEEEe
Confidence 999998884 875432111 112223445688887743221 11234579999999875 875
No 219
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.49 E-value=2.2 Score=38.53 Aligned_cols=101 Identities=6% Similarity=0.017 Sum_probs=51.3
Q ss_pred EEEEcCCCCCCCCcCceEEEEeCCCCe---EEe--ccCCcccccc-ccEEEE--CCEEEEEeCccCCCccCCceEEEeCC
Q 017349 181 IMAVGGTGANINETMTAVECYDPESDT---WTT--AAKLRMGLAR-YDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDIN 252 (373)
Q Consensus 181 iyv~GG~~~~~~~~~~~~~~yd~~t~~---W~~--~~~~~~~~~~-~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~ 252 (373)
+++.|+.+ ..+.+||..+.. +.. ...+...... ...+.. ++.+++.++.+ ..+.+||+.
T Consensus 196 ~l~s~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d------g~i~i~d~~ 262 (430)
T 2xyi_A 196 YLLSASDD-------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD------QKLMIWDTR 262 (430)
T ss_dssp EEEEECTT-------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT------SEEEEEETT
T ss_pred eEEEEeCC-------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC------CeEEEEECC
Confidence 66667654 358889887732 211 1111111111 112222 45677777655 579999998
Q ss_pred CCc-eeecccCccCCcce-EEEEE--CC-eEEEEeeCCCcceEEEeCCC
Q 017349 253 KDT-WNLMSDGMKEGWTG-ISIVL--EG-KLFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 253 ~~~-W~~~~~~~~~~~~~-~~~~~--~~-~l~v~gg~~~~~~~~yd~~~ 296 (373)
+.. ...+.. ....... .++.+ ++ .+++.|+. ...+.+||..+
T Consensus 263 ~~~~~~~~~~-~~~~~~~v~~i~~~p~~~~~l~tg~~-dg~v~vwd~~~ 309 (430)
T 2xyi_A 263 NNNTSKPSHT-VDAHTAEVNCLSFNPYSEFILATGSA-DKTVALWDLRN 309 (430)
T ss_dssp CSCSSSCSEE-EECCSSCEEEEEECSSCTTEEEEEET-TSEEEEEETTC
T ss_pred CCCCCcceeE-eecCCCCeEEEEeCCCCCCEEEEEeC-CCeEEEEeCCC
Confidence 763 111111 1111111 12233 23 47777775 56799999875
No 220
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.41 E-value=2.3 Score=36.98 Aligned_cols=213 Identities=10% Similarity=0.160 Sum_probs=107.3
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCC-CCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMP-CPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT 155 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~ 155 (373)
++.+|+.|.. ..++.-+-.-.+|..+.... .+. ..+..+.. .++.+|+.+.. + .+++-+-.
T Consensus 89 ~~~~~~~g~~-----g~i~~S~DgG~tW~~~~~~~~~~~----~~~~i~~~-~~~~~~~~~~~---g-----~v~~S~Dg 150 (327)
T 2xbg_A 89 GNEGWIVGEP-----PIMLHTTDGGQSWSQIPLDPKLPG----SPRLIKAL-GNGSAEMITNV---G-----AIYRTKDS 150 (327)
T ss_dssp TTEEEEEEET-----TEEEEESSTTSSCEECCCCTTCSS----CEEEEEEE-ETTEEEEEETT---C-----CEEEESST
T ss_pred CCeEEEEECC-----CeEEEECCCCCCceECccccCCCC----CeEEEEEE-CCCCEEEEeCC---c-----cEEEEcCC
Confidence 4567766532 12433333357899986432 111 12333333 26788887642 1 35555545
Q ss_pred CCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEE-eCCCCeEEeccCCccccccccEEE-ECCEEEE
Q 017349 156 TNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECY-DPESDTWTTAAKLRMGLARYDSAV-MGSKMYV 232 (373)
Q Consensus 156 t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~y-d~~t~~W~~~~~~~~~~~~~~~~~-~~~~lyv 232 (373)
-.+|+.+.... +...+.++.. ++.+|++|... .++.- |..-.+|+.+... .+...+.++. -++.+|+
T Consensus 151 G~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~~G--------~~~~S~d~gG~tW~~~~~~-~~~~~~~~~~~~~g~~~~ 220 (327)
T 2xbg_A 151 GKNWQALVQEA-IGVMRNLNRSPSGEYVAVSSRG--------SFYSTWEPGQTAWEPHNRT-TSRRLHNMGFTPDGRLWM 220 (327)
T ss_dssp TSSEEEEECSC-CCCEEEEEECTTSCEEEEETTS--------SEEEEECTTCSSCEEEECC-SSSCEEEEEECTTSCEEE
T ss_pred CCCCEEeecCC-CcceEEEEEcCCCcEEEEECCC--------cEEEEeCCCCCceeECCCC-CCCccceeEECCCCCEEE
Confidence 66899876432 2233344333 46666665321 13333 2235789887432 2222233333 2678887
Q ss_pred EeCccCCCccCCceEEEeCC-CCceeecccC-ccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecCC-CC
Q 017349 233 TEGWTWPFMFSPRGGVYDIN-KDTWNLMSDG-MKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGGD-KF 307 (373)
Q Consensus 233 ~gG~~~~~~~~~~i~~yd~~-~~~W~~~~~~-~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~-~~ 307 (373)
++... .++..+.. -.+|+.+..+ ++.......+.. ++.+|++|+.+ .+++-.-...+|+.+... +.
T Consensus 221 ~~~~G-------~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g--~i~~S~DgG~tW~~~~~~~~~ 291 (327)
T 2xbg_A 221 IVNGG-------KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG--ALLCSQDGGQTWQQDVDVKKV 291 (327)
T ss_dssp EETTT-------EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT--CEEEESSTTSSCEECGGGTTS
T ss_pred EeCCc-------eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC--eEEEeCCCCcccEEcCccCCC
Confidence 76421 34444322 5579987653 222221122333 67888887643 454433334689988631 22
Q ss_pred CCcccccceEEEE-eCCEEEEEeC
Q 017349 308 PCEVMHRPFAVNG-VEGKIYVVSS 330 (373)
Q Consensus 308 ~~~~~~~~~~~~~-~~~~l~i~GG 330 (373)
+ ...+.++. -+++++++|.
T Consensus 292 ~----~~~~~v~~~~~~~~~~~G~ 311 (327)
T 2xbg_A 292 P----SNFYKILFFSPDQGFILGQ 311 (327)
T ss_dssp S----SCCCEEEEEETTEEEEECS
T ss_pred C----CCeEEEEEECCCceEEEcC
Confidence 3 12233433 4667776665
No 221
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.36 E-value=4 Score=39.53 Aligned_cols=155 Identities=7% Similarity=0.097 Sum_probs=78.3
Q ss_pred EEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEE
Q 017349 122 ACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVEC 200 (373)
Q Consensus 122 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 200 (373)
.+..+..++.+++.|+.+ ..+.+||..+++-...-.- ....-.+++. -+++.++.|+.+ ..+.+
T Consensus 434 ~~v~~s~~g~~l~sgs~D-------g~v~vwd~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~D-------~~i~i 498 (694)
T 3dm0_A 434 EDVVLSSDGQFALSGSWD-------GELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNRQIVSASRD-------RTIKL 498 (694)
T ss_dssp EEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSSCEEEEETT-------SCEEE
T ss_pred EEEEECCCCCEEEEEeCC-------CcEEEEECCCCcceeEEeC-CCCCEEEEEEeCCCCEEEEEeCC-------CEEEE
Confidence 344445577777777752 2689999887743221100 1111112222 245556666654 35778
Q ss_pred EeCCCCeEEeccC-CccccccccEEEE--CC--EEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEEC
Q 017349 201 YDPESDTWTTAAK-LRMGLARYDSAVM--GS--KMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLE 275 (373)
Q Consensus 201 yd~~t~~W~~~~~-~~~~~~~~~~~~~--~~--~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 275 (373)
+|.....-..+.. .........++.+ ++ .+++.|+.+ ..+.+||+.+++-...-..........+..-+
T Consensus 499 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 572 (694)
T 3dm0_A 499 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD 572 (694)
T ss_dssp ECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred EECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCC
Confidence 8876553222221 1111111122222 22 355666655 57899999876543221111111111112226
Q ss_pred CeEEEEeeCCCcceEEEeCCCCc
Q 017349 276 GKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 276 ~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
+++++.|+. ...+..||..+.+
T Consensus 573 g~~l~sg~~-Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 573 GSLCASGGK-DGVVLLWDLAEGK 594 (694)
T ss_dssp SSEEEEEET-TSBCEEEETTTTE
T ss_pred CCEEEEEeC-CCeEEEEECCCCc
Confidence 777777765 5689999997764
No 222
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.33 E-value=2.6 Score=37.21 Aligned_cols=181 Identities=7% Similarity=-0.026 Sum_probs=90.7
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
..+.++|+.+.+........ .......+..++++++.++. +.+.+++..++..............
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~-------~~V~~v~fspdg~~l~s~s~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETR-------GEVKDLHFSTDGKVVAYITG--------SSLEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp CEEEEEETTTTEEEEEEECS-------SCCCEEEECTTSSEEEEECS--------SCEEEEETTTCCEEEEECCCCTTEE
T ss_pred CEEEEeECCCCcEEEEeCCC-------CceEEEEEccCCceEEeccc--------eeEEEEEeccCcceeeeecCCCCCC
Confidence 34777888876544322111 11223334446777766542 1467788777754332222111111
Q ss_pred e-eee-EeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc--CCccccccccEE-E-ECCEEEEEeCccCCCccCCc
Q 017349 172 F-ASG-NVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAA--KLRMGLARYDSA-V-MGSKMYVTEGWTWPFMFSPR 245 (373)
Q Consensus 172 ~-~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~-~-~~~~lyv~gG~~~~~~~~~~ 245 (373)
. ++. .-+++.++.++.+ . .....+..+|.......... .+......-.++ + -+|++++.|+.+ ..
T Consensus 222 v~~v~fspdg~~l~~~s~d--~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D------~~ 292 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLK--K-GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND------NS 292 (365)
T ss_dssp EEEEEEEETTEEEEEEEES--S-SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT------SC
T ss_pred EEEEEEcCCCCEEEEEecC--C-cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC------CE
Confidence 1 222 2367777776654 1 11224566676666544322 111111111122 2 278888888876 57
Q ss_pred eEEEeCCCCcee-ecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCC
Q 017349 246 GGVYDINKDTWN-LMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 246 i~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
|.+||..+++-. .+.......-...+..-++++++.|+. ...+.+||+..+
T Consensus 293 V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~-D~tvrvw~ip~~ 344 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSA-ANTIHIIKLPLN 344 (365)
T ss_dssp EEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEET-TSEEEEEECCTT
T ss_pred EEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeC-CCeEEEEEcCCC
Confidence 999999886532 111101111111111226777777665 668888887543
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.22 E-value=3 Score=37.60 Aligned_cols=224 Identities=7% Similarity=-0.004 Sum_probs=117.8
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+... ....+.++|+.++.-..+.... . ..+ .+....++.||+..... ...++++|+.+
T Consensus 141 ~g~lyv~d~----~~~~I~~id~~~g~~~~~~~~~-~-----~~~-ia~~~~g~~l~~~d~~~------~~~I~~~d~~~ 203 (409)
T 3hrp_A 141 NNTVLAYQR----DDPRVRLISVDDNKVTTVHPGF-K-----GGK-PAVTKDKQRVYSIGWEG------THTVYVYMKAS 203 (409)
T ss_dssp TTEEEEEET----TTTEEEEEETTTTEEEEEEETC-C-----BCB-CEECTTSSEEEEEBSST------TCEEEEEEGGG
T ss_pred CCCEEEEec----CCCcEEEEECCCCEEEEeeccC-C-----CCc-eeEecCCCcEEEEecCC------CceEEEEEcCC
Confidence 456777643 2346888999887665543322 1 112 33333355677764321 11789999876
Q ss_pred Cce-eccCCCC--CcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc---CCcccccc-c-cEEEE
Q 017349 157 NQW-QLASPML--TPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAA---KLRMGLAR-Y-DSAVM 226 (373)
Q Consensus 157 ~~W-~~~~~~~--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~---~~~~~~~~-~-~~~~~ 226 (373)
+.- ..+.... .....+.+++. ++.||+... ...+++||+.+.....+. ........ . ..++.
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~--------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS--------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT--------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC--------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEe
Confidence 532 2331111 11222334433 688998432 236999999887654442 11111122 1 44444
Q ss_pred --CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccC-----------CcceEEEEE--CCeEEEEeeCCCcceEE
Q 017349 227 --GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKE-----------GWTGISIVL--EGKLFVISEHGDCPMKQ 291 (373)
Q Consensus 227 --~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~-----------~~~~~~~~~--~~~l~v~gg~~~~~~~~ 291 (373)
++.||+..... +.|.+||.....-......... ......+++ +|+||+........|.+
T Consensus 276 p~~g~lyv~d~~~------~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 276 FVDSNFYMSDQNL------SSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp TTTTEEEEEETTT------TEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred CCCCEEEEEeCCC------CEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 58899885433 5789998865422111111000 011112333 57899886513678999
Q ss_pred EeCCCCceeeecCCCCC---------CcccccceEEEEe-CCEEEEEeCC
Q 017349 292 YNPDDDTWRYVGGDKFP---------CEVMHRPFAVNGV-EGKIYVVSSG 331 (373)
Q Consensus 292 yd~~~~~W~~~~~~~~~---------~~~~~~~~~~~~~-~~~l~i~GG~ 331 (373)
+|+.++....+...+.. ........+++.. ++.|||....
T Consensus 350 ~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 350 LDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW 399 (409)
T ss_dssp EETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST
T ss_pred EECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC
Confidence 99767766655432100 0112345666654 4889988754
No 224
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.22 E-value=4.4 Score=39.44 Aligned_cols=245 Identities=10% Similarity=-0.028 Sum_probs=118.9
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT 155 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~ 155 (373)
.+.++|++-.........+++.+.....+..+-....-............++.+++.++++.... + .....++++|..
T Consensus 82 dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~-G-~~~~~i~v~d~~ 159 (710)
T 2xdw_A 82 KGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS-G-SDWVTIKFMKVD 159 (710)
T ss_dssp ETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET-T-CSCEEEEEEETT
T ss_pred ECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC-C-CceEEEEEEECC
Confidence 36677776554444444677787776777654222100000001234445555666555543211 1 122379999999
Q ss_pred CCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCC---------CCCcCceEEEEeCCCCeEE--eccCCcc-cccccc
Q 017349 156 TNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGAN---------INETMTAVECYDPESDTWT--TAAKLRM-GLARYD 222 (373)
Q Consensus 156 t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~---------~~~~~~~~~~yd~~t~~W~--~~~~~~~-~~~~~~ 222 (373)
+++...... .... ....+.. +++.++++..+.. .......+++++..+++-+ .+-..+. +.....
T Consensus 160 tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~ 237 (710)
T 2xdw_A 160 GAKELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGG 237 (710)
T ss_dssp TTEEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred CCCCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEE
Confidence 998765321 1111 1122222 4443334333210 0022456888888877632 2211111 111122
Q ss_pred EEE-ECCEEEEEeCccCCCccCCceEEEeCCC------C--ceeecccCccCCcceEEEEECCeEEEEeeCC--CcceEE
Q 017349 223 SAV-MGSKMYVTEGWTWPFMFSPRGGVYDINK------D--TWNLMSDGMKEGWTGISIVLEGKLFVISEHG--DCPMKQ 291 (373)
Q Consensus 223 ~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~------~--~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~--~~~~~~ 291 (373)
... -+|+..++...... ...+.++.+|..+ + .++.+..... ........-++.||+.+..+ ...+++
T Consensus 238 ~~~SpDg~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~ 315 (710)
T 2xdw_A 238 AELSDDGRYVLLSIREGC-DPVNRLWYCDLQQESNGITGILKWVKLIDNFE-GEYDYVTNEGTVFTFKTNRHSPNYRLIN 315 (710)
T ss_dssp EEECTTSCEEEEEEECSS-SSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-SCEEEEEEETTEEEEEECTTCTTCEEEE
T ss_pred EEEcCCCCEEEEEEEccC-CCccEEEEEECcccccccCCccceEEeeCCCC-cEEEEEeccCCEEEEEECCCCCCCEEEE
Confidence 222 25654444432211 1136889999976 4 5776654221 11222233467788876543 457999
Q ss_pred EeCCCC---ceeeecCCCCCCcccccceEEEEe-CCEEEEEeC
Q 017349 292 YNPDDD---TWRYVGGDKFPCEVMHRPFAVNGV-EGKIYVVSS 330 (373)
Q Consensus 292 yd~~~~---~W~~~~~~~~~~~~~~~~~~~~~~-~~~l~i~GG 330 (373)
+|..+. .|+.+.. ..+ . ....++... +++|++...
T Consensus 316 ~d~~~~~~~~~~~l~~-~~~-~--~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVP-EHE-K--DVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp EETTSCCGGGCEEEEC-CCS-S--CEEEEEEEETTTEEEEEEE
T ss_pred EeCCCCCcccceeccC-CCC-C--CeEEEEEEEcCCEEEEEEE
Confidence 998775 5888753 111 0 111233334 667776654
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.13 E-value=4.6 Score=39.32 Aligned_cols=114 Identities=20% Similarity=0.296 Sum_probs=70.9
Q ss_pred eeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCcccc--------ccccEEEECCEEEEEeCccCCCccC
Q 017349 174 SGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRMGL--------ARYDSAVMGSKMYVTEGWTWPFMFS 243 (373)
Q Consensus 174 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~--------~~~~~~~~~~~lyv~gG~~~~~~~~ 243 (373)
.++.+++||+.... ..++.+|..|++ |+.-...+... ...+.++.+++||+....
T Consensus 66 P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d------- 130 (689)
T 1yiq_A 66 PIVVDGVMYTTGPF--------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD------- 130 (689)
T ss_dssp CEEETTEEEEECGG--------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT-------
T ss_pred CEEECCEEEEEcCC--------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC-------
Confidence 34679999987643 358999998875 98654332210 112345678898876532
Q ss_pred CceEEEeCCCCc--eeeccc-CccC--CcceEEEEECCeEEEEeeCC----CcceEEEeCCCCc--eeee
Q 017349 244 PRGGVYDINKDT--WNLMSD-GMKE--GWTGISIVLEGKLFVISEHG----DCPMKQYNPDDDT--WRYV 302 (373)
Q Consensus 244 ~~i~~yd~~~~~--W~~~~~-~~~~--~~~~~~~~~~~~l~v~gg~~----~~~~~~yd~~~~~--W~~~ 302 (373)
..++++|.++++ |+.-.. .... ......++.++++|+-.+.. ...+..||.++++ |+.-
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 131 GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 478999998875 875432 1111 11122267799988743321 3579999998874 8754
No 226
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.06 E-value=3.2 Score=37.31 Aligned_cols=152 Identities=9% Similarity=-0.054 Sum_probs=86.8
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccC--CCCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCc
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLAS--PMLTPRSFFASGN--VNGKIMAVGGTGANINETMT 196 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 196 (373)
.+.++...++.||+.-.. ...++++|+....-+.+. .+..| .++++ .++.||+.--. ...
T Consensus 162 ~glavD~~~~~lY~~d~~-------~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~------~~~ 225 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG------TPA 225 (400)
T ss_dssp EEEEEETTTTEEEEEETT-------TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECS------SSC
T ss_pred ccEEEEecCCceEEEECC-------CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCC------CCC
Confidence 466666558999998533 347889998876544432 22222 23444 36889987421 124
Q ss_pred eEEEEeCCCCeEEeccCCccccccc-cEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeeccc-CccCCcceEEE
Q 017349 197 AVECYDPESDTWTTAAKLRMGLARY-DSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGISI 272 (373)
Q Consensus 197 ~~~~yd~~t~~W~~~~~~~~~~~~~-~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~ 272 (373)
.++++++....=+.+.. .....+ +.++- +++||+.-... ..|+++|+....-+.+.. ......-...+
T Consensus 226 ~I~~~~~dG~~~~~~~~--~~l~~P~glavd~~~~~lY~aD~~~------~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~ 297 (400)
T 3p5b_L 226 KIKKGGLNGVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKL------HSISSIDVNGGNRKTILEDEKRLAHPFSLA 297 (400)
T ss_dssp CEEEEETTSCSCEEEEC--SSCSCEEEEEEETTTTEEEEEETTT------TEEEEEETTSCCCEEEEECSSTTSSEEEEE
T ss_pred EEEEEeCCCCccEEEEE--CCCCceEEEEEEeCCCEEEEEECCC------CEEEEEeCCCCccEEEEeCCCCCCCCEEEE
Confidence 68888887543333211 111122 23333 68899985432 689999987543333322 11111112235
Q ss_pred EECCeEEEEeeCCCcceEEEeCCCC
Q 017349 273 VLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 273 ~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
+.++.||+..- ....|+++|..++
T Consensus 298 v~~~~lywtd~-~~~~V~~~~~~~G 321 (400)
T 3p5b_L 298 VFEDKVFWTDI-INEAIFSANRLTG 321 (400)
T ss_dssp EETTEEEEEES-SSCSEEEEESSSC
T ss_pred EeCCEEEEecC-CCCeEEEEEcCCC
Confidence 68999999873 3678999996555
No 227
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.03 E-value=2.8 Score=36.42 Aligned_cols=201 Identities=15% Similarity=0.128 Sum_probs=107.9
Q ss_pred ceeEEEeeCCCCC--eee-CCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCce---eccCC
Q 017349 91 RIQWQALDPRSGR--WFV-LPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQW---QLASP 164 (373)
Q Consensus 91 ~~~~~~~d~~~~~--W~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W---~~~~~ 164 (373)
..++..+|+.... ... +..+. ...+.+....++.||...- ....++++++....- .....
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~-------~~~~ld~d~~~~~lyw~D~-------~~~~I~r~~~~g~~~~~~~~~~~ 77 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLE-------DAAAVDFVFSHGLIYWSDV-------SEEAIKRTEFNKTESVQNVVVSG 77 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEE-------EEEEEEEEGGGTEEEEEET-------TTTEEEEEETTSSSCCCEEEEEC
T ss_pred cCeEEEEECCCCceEEEEEecCCC-------ccEEEEEEeCCCEEEEEEC-------CCCcEEEEEccCCCceEEEEcCC
Confidence 4567788887653 111 11111 2234444444689999843 234789999876631 11111
Q ss_pred CCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec--cCCccccccccEEEE--CCEEEEEeCccC
Q 017349 165 MLTPRSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTA--AKLRMGLARYDSAVM--GSKMYVTEGWTW 238 (373)
Q Consensus 165 ~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~~--~~~lyv~gG~~~ 238 (373)
+. ...++++ .++.||+.-.. ...++++++....-+.+ ..+..| ...++. ++.||+.--.
T Consensus 78 l~---~p~glavd~~~g~ly~~d~~-------~~~I~~~~~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~-- 142 (318)
T 3sov_A 78 LL---SPDGLACDWLGEKLYWTDSE-------TNRIEVSNLDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG-- 142 (318)
T ss_dssp CS---CCCEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS--
T ss_pred CC---CccEEEEEcCCCeEEEEECC-------CCEEEEEECCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC--
Confidence 11 1223343 47899987433 24688998876543333 222222 123332 5889987521
Q ss_pred CCccCCceEEEeCCCCceeecccCccCCcc-eEEEE-ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccce
Q 017349 239 PFMFSPRGGVYDINKDTWNLMSDGMKEGWT-GISIV-LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPF 316 (373)
Q Consensus 239 ~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~-~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 316 (373)
....|+++++....=+.+.. ...... +.++- .+++||+.... ...|+++|++...-+.+.... .....
T Consensus 143 ---~~~~I~r~~~dG~~~~~~~~-~~l~~Pnglavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~~~~-----~~~P~ 212 (318)
T 3sov_A 143 ---EVPKIERAGMDGSSRFIIIN-SEIYWPNGLTLDYEEQKLYWADAK-LNFIHKSNLDGTNRQAVVKGS-----LPHPF 212 (318)
T ss_dssp ---SSCEEEEEETTSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEECSC-----CSCEE
T ss_pred ---CCCEEEEEEcCCCCeEEEEE-CCCCCccEEEEeccCCEEEEEECC-CCEEEEEcCCCCceEEEecCC-----CCCce
Confidence 12579999986432222211 111111 22222 27889998653 678999998754444443211 13447
Q ss_pred EEEEeCCEEEEEeC
Q 017349 317 AVNGVEGKIYVVSS 330 (373)
Q Consensus 317 ~~~~~~~~l~i~GG 330 (373)
+++..++.||+.--
T Consensus 213 glav~~~~lywtd~ 226 (318)
T 3sov_A 213 ALTLFEDILYWTDW 226 (318)
T ss_dssp EEEEETTEEEEEET
T ss_pred EEEEeCCEEEEEec
Confidence 88878888888753
No 228
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=93.99 E-value=4.3 Score=38.48 Aligned_cols=203 Identities=12% Similarity=0.038 Sum_probs=102.2
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCC--CCCeeeCCCCCCCCCCCCCceEEEEe----ccCCEEEEEcCccCCCCCCccee
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPR--SGRWFVLPPMPCPKAVCPQAFACTSL----PRQGKLFVLGGMRSDTETPMQST 149 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~--~~~W~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~v~GG~~~~~~~~~~~~ 149 (373)
.+.++|+.+. ...+.+||+. +.+ .+..++... ...+.+.. ..+.++|+..-. .+.+
T Consensus 207 DGr~lyv~~~-----dg~V~viD~~~~t~~--~v~~i~~G~----~P~~ia~s~~~~pDGk~l~v~n~~-------~~~v 268 (567)
T 1qks_A 207 SGRYLFVIGR-----DGKVNMIDLWMKEPT--TVAEIKIGS----EARSIETSKMEGWEDKYAIAGAYW-------PPQY 268 (567)
T ss_dssp TSCEEEEEET-----TSEEEEEETTSSSCC--EEEEEECCS----EEEEEEECCSTTCTTTEEEEEEEE-------TTEE
T ss_pred CCCEEEEEcC-----CCeEEEEECCCCCCc--EeEEEecCC----CCceeEEccccCCCCCEEEEEEcc-------CCeE
Confidence 4667777542 2368899986 443 333333211 11233332 125577776432 3478
Q ss_pred EEEeCCCCceec-cC--CC--------CCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccc
Q 017349 150 IMYRATTNQWQL-AS--PM--------LTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGL 218 (373)
Q Consensus 150 ~~yd~~t~~W~~-~~--~~--------~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~ 218 (373)
.++|..+.+=.+ ++ .+ +.+|........++..+++.-. ....+.+.|..+.....+..++..+
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~------~~g~v~~vd~~~~~~~~v~~i~~~~ 342 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK------ETGKILLVDYTDLNNLKTTEISAER 342 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET------TTTEEEEEETTCSSEEEEEEEECCS
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec------CCCeEEEEecCCCccceeeeeeccc
Confidence 889977764322 11 11 1223222222223333333211 1345777887766554444444444
Q ss_pred ccccEEEE-CCE-EEEEeCccCCCccCCceEEEeCCCCceeec-cc--CccCCcceEEEEE--CCeEEEEeeCCCcceEE
Q 017349 219 ARYDSAVM-GSK-MYVTEGWTWPFMFSPRGGVYDINKDTWNLM-SD--GMKEGWTGISIVL--EGKLFVISEHGDCPMKQ 291 (373)
Q Consensus 219 ~~~~~~~~-~~~-lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~-~~--~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~ 291 (373)
.-|..... +++ +|+..... +.+.++|.++++=... +. ..+-+..+..... ++.+|+.+..+...+.+
T Consensus 343 ~~~d~~~~pdgr~~~va~~~s------n~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsv 416 (567)
T 1qks_A 343 FLHDGGLDGSHRYFITAANAR------NKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVAL 416 (567)
T ss_dssp SEEEEEECTTSCEEEEEEGGG------TEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEE
T ss_pred cccCceECCCCCEEEEEeCCC------CeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEE
Confidence 44444333 555 44444332 6799999998863221 11 0121112322333 36788776444558889
Q ss_pred EeCCCC-----ceeeecCCCCC
Q 017349 292 YNPDDD-----TWRYVGGDKFP 308 (373)
Q Consensus 292 yd~~~~-----~W~~~~~~~~~ 308 (373)
+|..+. .|+.+..++..
T Consensus 417 id~~~~~~~~~~~kvv~~i~~~ 438 (567)
T 1qks_A 417 IGTDPEGHPDNAWKILDSFPAL 438 (567)
T ss_dssp EECCTTTCTTTBTSEEEEEECS
T ss_pred ecCCCCCCccccCEEEEEEecC
Confidence 987663 39888765543
No 229
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.90 E-value=3.2 Score=36.64 Aligned_cols=207 Identities=9% Similarity=0.032 Sum_probs=95.4
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEE
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
++.+..++++.++++... -..+.+||+.+.+-..... ....-..++. -++++++.++.+ .+.++
T Consensus 138 ~v~fSpDg~~la~as~~~-----d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~~--------~~~~~ 202 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKV-----PAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITGS--------SLEVI 202 (365)
T ss_dssp EEEECTTSSCEEEEESCS-----SCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEEEECSS--------CEEEE
T ss_pred EEEEcCCCCEEEEEECCC-----CCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEEeccce--------eEEEE
Confidence 344445666554432211 2368899998876543221 1111122222 256666655432 46777
Q ss_pred eCCCCeEEeccCCcccc--ccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeeccc-CccCCcceE-EE--EEC
Q 017349 202 DPESDTWTTAAKLRMGL--ARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGI-SI--VLE 275 (373)
Q Consensus 202 d~~t~~W~~~~~~~~~~--~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~-~~--~~~ 275 (373)
+..++............ ....+..-+++.++.++.+.. ....+..+|........... ......... ++ .-+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spd 280 (365)
T 4h5i_A 203 STVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG--KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMK 280 (365)
T ss_dssp ETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS--CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTT
T ss_pred EeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc--ceeEEeecccccceecceeeeeecCCCCCeEeEEECCC
Confidence 77776543322111111 111222347887777765421 11245667776665543321 111111111 12 237
Q ss_pred CeEEEEeeCCCcceEEEeCCCCceee-ecCCCCCCcccccceEE-EEeCCEEEEEeCCceeeeeEEEEe--ecCCcccce
Q 017349 276 GKLFVISEHGDCPMKQYNPDDDTWRY-VGGDKFPCEVMHRPFAV-NGVEGKIYVVSSGLNVAIGRVYEE--QNGGISAEW 351 (373)
Q Consensus 276 ~~l~v~gg~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~-~~~~~~l~i~GG~~~~~~~~~~~~--~~d~~~~~W 351 (373)
|++++.|+. ...+.+||..+.+-.. +.. ... ..-.++ ...++++++.|+... ...|++. .|...+..|
T Consensus 281 g~~lasgs~-D~~V~iwd~~~~~~~~~~~~-gH~----~~V~~v~fSpdg~~laS~S~D~--tvrvw~ip~~~~~~~s~~ 352 (365)
T 4h5i_A 281 GELAVLASN-DNSIALVKLKDLSMSKIFKQ-AHS----FAITEVTISPDSTYVASVSAAN--TIHIIKLPLNYANYTSMK 352 (365)
T ss_dssp SCEEEEEET-TSCEEEEETTTTEEEEEETT-SSS----SCEEEEEECTTSCEEEEEETTS--EEEEEECCTTTTC-----
T ss_pred CCceEEEcC-CCEEEEEECCCCcEEEEecC-ccc----CCEEEEEECCCCCEEEEEeCCC--eEEEEEcCCCCcCccCcc
Confidence 888888776 5689999998764322 211 111 112233 345788777776422 2345552 233444455
Q ss_pred EEe
Q 017349 352 KVM 354 (373)
Q Consensus 352 ~~~ 354 (373)
+.+
T Consensus 353 ~~l 355 (365)
T 4h5i_A 353 QKI 355 (365)
T ss_dssp ---
T ss_pred ccc
Confidence 443
No 230
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.90 E-value=2.3 Score=40.59 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=69.7
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeC-CCCe--EEeccCCcccc--------ccccEEE--ECCE----EEEEeC
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDP-ESDT--WTTAAKLRMGL--------ARYDSAV--MGSK----MYVTEG 235 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~~--------~~~~~~~--~~~~----lyv~gG 235 (373)
+.++.+++||+....+ ..++.+|. .+++ |+.-...+... .....++ .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~~-------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSFP-------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp CCEEETTEEEEECSTT-------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred ccEEECCEEEEEeCCC-------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 3456799999986521 35899999 7774 98754332210 1122344 5677 887543
Q ss_pred ccCCCccCCceEEEeCCCCc--eeecccCccC--CcceEEEEECCeEEEEeeC----CCcceEEEeCCCC--ceeee
Q 017349 236 WTWPFMFSPRGGVYDINKDT--WNLMSDGMKE--GWTGISIVLEGKLFVISEH----GDCPMKQYNPDDD--TWRYV 302 (373)
Q Consensus 236 ~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~--~~~~~~~~~~~~l~v~gg~----~~~~~~~yd~~~~--~W~~~ 302 (373)
. ..++++|.++++ |+.-...... ......++.++++|+-.+. ....+..||.+++ .|+.-
T Consensus 130 d-------g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 D-------GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp T-------SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred C-------CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 2 479999998875 8753211111 1122226678988875421 1458999999876 47754
No 231
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=93.90 E-value=0.021 Score=54.70 Aligned_cols=35 Identities=14% Similarity=0.074 Sum_probs=32.1
Q ss_pred CCCCCChHHHHHhhccC-CccchhhhhhhcHhHHhh
Q 017349 26 LIPGLPDEIGELCLLHV-PYPYQALVRSVSYSWNKA 60 (373)
Q Consensus 26 ~~~~LP~dl~~~il~rl-p~~~l~~~~~v~k~W~~l 60 (373)
....||||++.+||.+| |.++..++..|||+|+.+
T Consensus 12 ~~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 12 SCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred ccCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 34579999999999999 899999999999999987
No 232
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.85 E-value=0.73 Score=44.81 Aligned_cols=115 Identities=20% Similarity=0.251 Sum_probs=71.0
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCcccc--------ccccEEEECCEEEEEeCccCCCcc
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRMGL--------ARYDSAVMGSKMYVTEGWTWPFMF 242 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~--------~~~~~~~~~~~lyv~gG~~~~~~~ 242 (373)
+-++.+++||+.... ..++.+|..|++ |+.-...+... .....++.+++||+....
T Consensus 61 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------ 126 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW--------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD------ 126 (668)
T ss_dssp CCEEETTEEEEEEGG--------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT------
T ss_pred CCEEECCEEEEECCC--------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC------
Confidence 345679999987643 358999998875 98754332211 112345678888876432
Q ss_pred CCceEEEeCCCCc--eeecccCcc-CC-cceEEEEECCeEEEEeeCC----CcceEEEeCCCC--ceeee
Q 017349 243 SPRGGVYDINKDT--WNLMSDGMK-EG-WTGISIVLEGKLFVISEHG----DCPMKQYNPDDD--TWRYV 302 (373)
Q Consensus 243 ~~~i~~yd~~~~~--W~~~~~~~~-~~-~~~~~~~~~~~l~v~gg~~----~~~~~~yd~~~~--~W~~~ 302 (373)
..++++|.++++ |+.-..... .. .....++.++++|+..+.. ...+..||.+++ .|+.-
T Consensus 127 -g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 -GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp -SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred -CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 479999998875 875432111 11 1122266789888753321 357999999876 47753
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=93.83 E-value=0.16 Score=45.45 Aligned_cols=139 Identities=12% Similarity=0.082 Sum_probs=58.9
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCC--ceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTN--QWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
++.||+.+. + ..++.+|..++ .|+.-. . ....+.+..++++|+.++.+ ..++.+|..++
T Consensus 9 ~~~v~~gs~---d-----g~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~d-------g~l~a~d~~tG 69 (369)
T 2hz6_A 9 ETLLFVSTL---D-----GSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPND-------GSLYTLGSKNN 69 (369)
T ss_dssp TTEEEEEET---T-----SEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTT-------CCEEEC-----
T ss_pred CCEEEEEcC---C-----CEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCC-------CEEEEEECCCC
Confidence 677777543 1 26899998887 476533 1 11122334567788776543 34888998765
Q ss_pred --eEEeccCCccccccccEEE-ECCEEEEEeCccCCCccCCceEEEeCCCCc--eeecccCccCCcceEEEEECCeEEEE
Q 017349 207 --TWTTAAKLRMGLARYDSAV-MGSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKEGWTGISIVLEGKLFVI 281 (373)
Q Consensus 207 --~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~l~v~ 281 (373)
.|+.-...+... ..+.+. .++.||+ |+.+ ..++++|.++++ |+.-... .. ..+..++.||+.
T Consensus 70 ~~~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~d------g~v~a~D~~tG~~~w~~~~~~-~~----~~~p~~~~v~~~ 136 (369)
T 2hz6_A 70 EGLTKLPFTIPELV-QASPCRSSDGILYM-GKKQ------DIWYVIDLLTGEKQQTLSSAF-AD----SLSPSTSLLYLG 136 (369)
T ss_dssp CCSEECSCCHHHHH-TTCSCC-----CCC-CEEE------EEEEEECCC---------------------------EEEE
T ss_pred ceeeeeeccCcccc-ccCceEecCCEEEE-EeCC------CEEEEEECCCCcEEEEecCCC-cc----cccccCCEEEEE
Confidence 465422221111 111122 4566654 3332 468999998775 7543211 00 011245556654
Q ss_pred eeCCCcceEEEeCCCCc--eee
Q 017349 282 SEHGDCPMKQYNPDDDT--WRY 301 (373)
Q Consensus 282 gg~~~~~~~~yd~~~~~--W~~ 301 (373)
+. ...+..+|+++++ |+.
T Consensus 137 ~~--dg~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 137 RT--EYTITMYDTKTRELRWNA 156 (369)
T ss_dssp EE--EEEEECCCSSSSSCCCEE
T ss_pred ec--CCEEEEEECCCCCEEEeE
Confidence 32 3478889987653 774
No 234
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=93.57 E-value=3.2 Score=35.65 Aligned_cols=152 Identities=9% Similarity=0.081 Sum_probs=76.5
Q ss_pred EEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceec-cCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEE
Q 017349 122 ACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQL-ASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVE 199 (373)
Q Consensus 122 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~ 199 (373)
.+..+..++..++.|+.+ ..+.+||..+++-.. +.. ....-.++.. -++.+++.|+.+ ..+.
T Consensus 69 ~~~~~s~dg~~l~s~s~D-------~~v~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~s~D-------~~i~ 132 (319)
T 3frx_A 69 QDCTLTADGAYALSASWD-------KTLRLWDVATGETYQRFVG--HKSDVMSVDIDKKASMIISGSRD-------KTIK 132 (319)
T ss_dssp EEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSCEEEEEETT-------SCEE
T ss_pred EEEEECCCCCEEEEEeCC-------CEEEEEECCCCCeeEEEcc--CCCcEEEEEEcCCCCEEEEEeCC-------CeEE
Confidence 334444467777777652 268899998875321 111 0111112222 245666777665 3577
Q ss_pred EEeCCCCeEEeccCCccccccccEEEE-------CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEE
Q 017349 200 CYDPESDTWTTAAKLRMGLARYDSAVM-------GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISI 272 (373)
Q Consensus 200 ~yd~~t~~W~~~~~~~~~~~~~~~~~~-------~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~ 272 (373)
+||.....-..+..-... -...... ++.+++.|+.+ ..+..||+.+.+-...-..........+.
T Consensus 133 vwd~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 204 (319)
T 3frx_A 133 VWTIKGQCLATLLGHNDW--VSQVRVVPNEKADDDSVTIISAGND------KMVKAWNLNQFQIEADFIGHNSNINTLTA 204 (319)
T ss_dssp EEETTSCEEEEECCCSSC--EEEEEECCC------CCEEEEEETT------SCEEEEETTTTEEEEEECCCCSCEEEEEE
T ss_pred EEECCCCeEEEEeccCCc--EEEEEEccCCCCCCCccEEEEEeCC------CEEEEEECCcchhheeecCCCCcEEEEEE
Confidence 888865543332211100 0011111 23355666655 57889998776532211111111111112
Q ss_pred EECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 273 VLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 273 ~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
.-++++++.|+. ...+..||..+.+
T Consensus 205 sp~g~~l~s~~~-dg~i~iwd~~~~~ 229 (319)
T 3frx_A 205 SPDGTLIASAGK-DGEIMLWNLAAKK 229 (319)
T ss_dssp CTTSSEEEEEET-TCEEEEEETTTTE
T ss_pred cCCCCEEEEEeC-CCeEEEEECCCCc
Confidence 226777777765 5689999988764
No 235
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.55 E-value=6.1 Score=38.79 Aligned_cols=147 Identities=12% Similarity=0.098 Sum_probs=82.1
Q ss_pred ccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 127 PRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 127 ~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
..++.|++... ..+++||+.++++....... ......+...++.|++... ..+.+||+.++
T Consensus 71 d~~g~lWigT~---------~Gl~~yd~~~~~f~~~~~~~-~~~i~~i~~~~g~lWigt~---------~Gl~~~~~~~~ 131 (758)
T 3ott_A 71 IDNTYLYMGTD---------NGILVYNYRADRYEQPETDF-PTDVRTMALQGDTLWLGAL---------NGLYTYQLQSR 131 (758)
T ss_dssp ETTTEEEEEET---------TEEEEEETTTTEECCCSCCC-CSCEEEEEEETTEEEEEET---------TEEEEEETTTC
T ss_pred cCCCcEEEEeC---------CCeEEEeCCCCEEECcccCC-CceEEEEEecCCcEEEEcC---------CcceeEeCCCC
Confidence 34788888532 25899999998876521111 1111223335778887421 25889999998
Q ss_pred eEEeccCCcccc--ccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCC---cceEEEEE--C-C
Q 017349 207 TWTTAAKLRMGL--ARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEG---WTGISIVL--E-G 276 (373)
Q Consensus 207 ~W~~~~~~~~~~--~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~---~~~~~~~~--~-~ 276 (373)
+.+......... ........ +|.|++... ..+.+||+.+++++.+..+.... ..-.+... + +
T Consensus 132 ~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~ 203 (758)
T 3ott_A 132 KLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTY--------NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQ 203 (758)
T ss_dssp CEEEECHHHHCCSCSCEEEEEECTTCCEEEEET--------TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTT
T ss_pred eEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeC--------CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCC
Confidence 887663211111 11111222 677877431 35889999998887654321111 11112222 2 3
Q ss_pred eEEEEeeCCCcceEEEeCCCCceeeec
Q 017349 277 KLFVISEHGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 277 ~l~v~gg~~~~~~~~yd~~~~~W~~~~ 303 (373)
.|+|-. . ..+.+||+.++++....
T Consensus 204 ~lWigt-~--~Gl~~~~~~~~~~~~~~ 227 (758)
T 3ott_A 204 CVWIGT-E--GYLFQYFPSTGQIKQTE 227 (758)
T ss_dssp EEEEEE-E--EEEEEEETTTTEEEEEE
T ss_pred EEEEEE-C--CCCeEEcCCCCeEEecc
Confidence 466632 2 36889999988887654
No 236
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.52 E-value=3.4 Score=35.81 Aligned_cols=185 Identities=6% Similarity=-0.061 Sum_probs=101.1
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCC---eeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEe
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGR---WFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYR 153 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~---W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd 153 (373)
++.||+.- .....++++++.... +.....+. .-.+.++...++.||+.-.. ...+++++
T Consensus 46 ~~~lyw~D----~~~~~I~r~~~~g~~~~~~~~~~~l~-------~p~glavd~~~g~ly~~d~~-------~~~I~~~~ 107 (318)
T 3sov_A 46 HGLIYWSD----VSEEAIKRTEFNKTESVQNVVVSGLL-------SPDGLACDWLGEKLYWTDSE-------TNRIEVSN 107 (318)
T ss_dssp GTEEEEEE----TTTTEEEEEETTSSSCCCEEEEECCS-------CCCEEEEETTTTEEEEEETT-------TTEEEEEE
T ss_pred CCEEEEEE----CCCCcEEEEEccCCCceEEEEcCCCC-------CccEEEEEcCCCeEEEEECC-------CCEEEEEE
Confidence 45677653 223457778776542 22222222 22355555458999997432 34788999
Q ss_pred CCCCceecc--CCCCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc--CCccccccccEEEE-
Q 017349 154 ATTNQWQLA--SPMLTPRSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAA--KLRMGLARYDSAVM- 226 (373)
Q Consensus 154 ~~t~~W~~~--~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~- 226 (373)
+....-+.+ ..+..| .++++ .++.||+.--. ....++++++....-+.+. .+..| .+.++-
T Consensus 108 ~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~------~~~~I~r~~~dG~~~~~~~~~~l~~P---nglavd~ 175 (318)
T 3sov_A 108 LDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG------EVPKIERAGMDGSSRFIIINSEIYWP---NGLTLDY 175 (318)
T ss_dssp TTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS------SSCEEEEEETTSCSCEEEECSSCSCE---EEEEEET
T ss_pred CCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC------CCCEEEEEEcCCCCeEEEEECCCCCc---cEEEEec
Confidence 876543333 222222 23333 36788887411 1356889988754323221 12111 223333
Q ss_pred -CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCce
Q 017349 227 -GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 227 -~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W 299 (373)
+++||+.-... ..|+++|+....-+.+.. .....-...++.++.+|+.. .....|.++|+.+++-
T Consensus 176 ~~~~lY~aD~~~------~~I~~~d~dG~~~~~~~~-~~~~~P~glav~~~~lywtd-~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 176 EEQKLYWADAKL------NFIHKSNLDGTNRQAVVK-GSLPHPFALTLFEDILYWTD-WSTHSILACNKYTGEG 241 (318)
T ss_dssp TTTEEEEEETTT------TEEEEEETTSCSCEEEEC-SCCSCEEEEEEETTEEEEEE-TTTTEEEEEETTTCCS
T ss_pred cCCEEEEEECCC------CEEEEEcCCCCceEEEec-CCCCCceEEEEeCCEEEEEe-cCCCeEEEEECCCCCc
Confidence 68899985432 689999986433222221 11111122356789999984 3467899999966544
No 237
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.48 E-value=3 Score=36.09 Aligned_cols=143 Identities=9% Similarity=-0.009 Sum_probs=76.2
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeee-EeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASG-NVNGKIMAVGGTGANINETMTAVECYDPESDT 207 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 207 (373)
++.+|+++.. ...+++||+.+++.+... .+ ....+++ .-++++++... ..+++||+.+++
T Consensus 60 ~~~l~~~d~~-------~~~i~~~d~~~~~~~~~~-~~--~~v~~i~~~~dg~l~v~~~---------~gl~~~d~~~g~ 120 (326)
T 2ghs_A 60 SGTAWWFNIL-------ERELHELHLASGRKTVHA-LP--FMGSALAKISDSKQLIASD---------DGLFLRDTATGV 120 (326)
T ss_dssp TTEEEEEEGG-------GTEEEEEETTTTEEEEEE-CS--SCEEEEEEEETTEEEEEET---------TEEEEEETTTCC
T ss_pred CCEEEEEECC-------CCEEEEEECCCCcEEEEE-CC--CcceEEEEeCCCeEEEEEC---------CCEEEEECCCCc
Confidence 4788887543 237999999988655432 12 1122222 24678777541 248999999998
Q ss_pred EEeccCCcccc--ccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEE-ECC-eEEEE
Q 017349 208 WTTAAKLRMGL--ARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIV-LEG-KLFVI 281 (373)
Q Consensus 208 W~~~~~~~~~~--~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~-~l~v~ 281 (373)
.+.+...+... ........ +|++|+.............+++|| +++.+.+.... ......+. -++ .||+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~--~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI--SIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE--SSEEEEEECTTSCEEEEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC--cccCCeEEcCCCCEEEEE
Confidence 87664332211 11112222 678876432111111234688888 46655442211 11111122 245 47776
Q ss_pred eeCCCcceEEEeCC
Q 017349 282 SEHGDCPMKQYNPD 295 (373)
Q Consensus 282 gg~~~~~~~~yd~~ 295 (373)
.. ....+++||.+
T Consensus 197 ~~-~~~~I~~~d~~ 209 (326)
T 2ghs_A 197 DT-KVNRLMRVPLD 209 (326)
T ss_dssp ET-TTCEEEEEEBC
T ss_pred EC-CCCEEEEEEcc
Confidence 43 35689999975
No 238
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.46 E-value=3.3 Score=35.37 Aligned_cols=200 Identities=14% Similarity=0.013 Sum_probs=98.7
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+.+. ....++.||+ +.....+.... . ...+.+ ...++++|+.... ...+.+||+.
T Consensus 56 g~~l~~~d~----~~~~i~~~~~-~g~~~~~~~~~-~-----~~~gl~-~d~dG~l~v~~~~-------~~~v~~~~~~- 115 (305)
T 3dr2_A 56 QRTLVWSDL----VGRRVLGWRE-DGTVDVLLDAT-A-----FTNGNA-VDAQQRLVHCEHG-------RRAITRSDAD- 115 (305)
T ss_dssp GTEEEEEET----TTTEEEEEET-TSCEEEEEESC-S-----CEEEEE-ECTTSCEEEEETT-------TTEEEEECTT-
T ss_pred CCEEEEEEC----CCCEEEEEeC-CCCEEEEeCCC-C-----ccceee-ECCCCCEEEEECC-------CCEEEEECCC-
Confidence 455666643 2345778888 44444332111 0 123333 3336788876421 2368899986
Q ss_pred CceeccCCCCCc-ce--eeeeeE-eCCeEEEE----cCCC------CCCCCcCceEEEEeCCCCeEEeccCCcccccccc
Q 017349 157 NQWQLASPMLTP-RS--FFASGN-VNGKIMAV----GGTG------ANINETMTAVECYDPESDTWTTAAKLRMGLARYD 222 (373)
Q Consensus 157 ~~W~~~~~~~~~-r~--~~~~~~-~~~~iyv~----GG~~------~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 222 (373)
++.+.+...... +. ...++. -++++|+. |-.. .........+++||+.+++.+.+. .... ...
T Consensus 116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~-p~g 192 (305)
T 3dr2_A 116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH-PNG 192 (305)
T ss_dssp SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS-EEE
T ss_pred CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC-Ccc
Confidence 655554322111 11 112222 36788885 3211 001112357999999888877654 1111 112
Q ss_pred EEEE-CC-EEEEEeCccCCCccCCceEEEeCCCCceeeccc--CccCC-cceEEEEECCeEEEEeeCCCcceEEEeCCCC
Q 017349 223 SAVM-GS-KMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD--GMKEG-WTGISIVLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 223 ~~~~-~~-~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~--~~~~~-~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
.+.. ++ .||+..... .......+++||...+....... ..... -.+.++--+|+||+..+ ..+.+||++.+
T Consensus 193 l~~spdg~~lyv~~~~~-~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~---~gv~~~~~~g~ 268 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPE-QGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG---TGVCVFDSDGQ 268 (305)
T ss_dssp EEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS---SEEEEECTTSC
T ss_pred eEEcCCCCEEEEEecCC-cCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC---CcEEEECCCCC
Confidence 2332 45 477765321 01112578999987654221111 01111 12223334688887653 26999999766
Q ss_pred ceeeec
Q 017349 298 TWRYVG 303 (373)
Q Consensus 298 ~W~~~~ 303 (373)
....+.
T Consensus 269 ~~~~~~ 274 (305)
T 3dr2_A 269 LLGHIP 274 (305)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 555554
No 239
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=93.34 E-value=2 Score=35.35 Aligned_cols=141 Identities=8% Similarity=0.056 Sum_probs=75.8
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEeC---------------CCCceeccCCCCC--cceeeeeeEeCCeEEEEcCCCCC
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYRA---------------TTNQWQLASPMLT--PRSFFASGNVNGKIMAVGGTGAN 190 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd~---------------~t~~W~~~~~~~~--~r~~~~~~~~~~~iyv~GG~~~~ 190 (373)
.++.+|+|-|. .+|+++. .+..|..++.... .....+.-..++++|+|-|..
T Consensus 14 ~~ge~yfFkg~---------~~wr~~~~~~~~~~~~~~~P~~I~~~W~~Lp~~~f~p~~iDaaf~~~~g~~~fFKg~~-- 82 (227)
T 3lp9_A 14 KNNEAYFFIND---------KYVLLDYAPGSSRDKVLYGPTPVRDGFKSLNQTIFGSYGIDCSFDTENNEAFIFYENF-- 82 (227)
T ss_dssp STTEEEEEETT---------EEEEEECCTTSSCCEEEEEEEEHHHHSGGGTTSHHHHHCCSEEEECSTTEEEEEETTE--
T ss_pred CCCeEEEEECC---------EEEEEeCCCCCccccccCCceEHhhcCCcCCcccCCCCCceEEEECCCCEEEEEeCCE--
Confidence 47999999664 4566554 2234666643211 112222223689999998753
Q ss_pred CCCcCceEEEEe--CCCCeEE------ec----cCCccc--cccccEEEE---CCEEEEEeCccCCCccCCceEEEeCCC
Q 017349 191 INETMTAVECYD--PESDTWT------TA----AKLRMG--LARYDSAVM---GSKMYVTEGWTWPFMFSPRGGVYDINK 253 (373)
Q Consensus 191 ~~~~~~~~~~yd--~~t~~W~------~~----~~~~~~--~~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~~yd~~~ 253 (373)
.++|+ +.+..-. .+ +.||.. ...--+|.. ++++|+|-| +..++||..+
T Consensus 83 -------~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG--------~~yw~~d~~~ 147 (227)
T 3lp9_A 83 -------CALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG--------DQYARIDYGS 147 (227)
T ss_dssp -------EEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET--------TEEEEEETTT
T ss_pred -------EEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC--------CEEEEEeCCC
Confidence 77777 3211111 11 123210 111223333 689999987 4688999875
Q ss_pred Cceee-ccc----CccC-------CcceEEEE--ECCeEEEEeeCCCcceEEEeCCCC
Q 017349 254 DTWNL-MSD----GMKE-------GWTGISIV--LEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 254 ~~W~~-~~~----~~~~-------~~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
++-.. .+. ..+. ....++.. .++++|.+-|. ..|+||..++
T Consensus 148 ~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~---~Ywr~d~~~~ 202 (227)
T 3lp9_A 148 NSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD---HYARVKVTPX 202 (227)
T ss_dssp TEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT---EEEEEECCSS
T ss_pred ccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC---EEEEEECCcc
Confidence 54221 111 0111 12223333 35899999875 8999998776
No 240
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=93.20 E-value=2.7 Score=33.62 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=78.0
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCC-----------ceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTN-----------QWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETM 195 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~-----------~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 195 (373)
++++|+|-|. .+|+++.... .|..+ |. .--++... ++++|++-|..
T Consensus 16 ~g~~yfFkg~---------~~Wr~~~~~~~~~~~p~~Is~~w~gl---P~--~IDAa~~~~~~~~~yfFkG~~------- 74 (195)
T 1itv_A 16 GNQLYLFKDG---------KYWRFSEGRGSRPQGPFLIADKWPAL---PR--KLDSVFEEPLSKKLFFFSGRQ------- 74 (195)
T ss_dssp TTEEEEEETT---------EEEEECCSSSCCCEEEEEHHHHCTTS---CS--SCSEEEECTTTCCEEEEETTE-------
T ss_pred CCEEEEEECC---------EEEEEECCccccCCCcEEhhhccCCC---CC--CccEEEEECCCCeEEEEeCCE-------
Confidence 8999999774 5788876542 13322 22 11222222 68899998753
Q ss_pred ceEEEEeCCCCeE-EeccC--CccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceee-----ccc---C
Q 017349 196 TAVECYDPESDTW-TTAAK--LRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-----MSD---G 262 (373)
Q Consensus 196 ~~~~~yd~~t~~W-~~~~~--~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-----~~~---~ 262 (373)
.++|+..+..- +.+.. +|......-+|+. ++++|+|-| +..++||..+++=.. +.. .
T Consensus 75 --yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~~~~~~~gyPr~i~~~w~G 144 (195)
T 1itv_A 75 --VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVKAQMVDPRSASEVDRMFPG 144 (195)
T ss_dssp --EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETTTTEECGGGCEEHHHHSTT
T ss_pred --EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCCcccccCCCccChhhcCCC
Confidence 67776542111 11222 2221112234443 689999977 457899987654221 110 1
Q ss_pred ccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 263 MKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 263 ~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
.+. ...++...+|.+|.+-|. ..++||..+..-.
T Consensus 145 vp~-~idaa~~~~g~~Yffkg~---~y~~~~~~~~~v~ 178 (195)
T 1itv_A 145 VPL-DTHDVFQFREKAYFCQDR---FYWRVSSRSELNQ 178 (195)
T ss_dssp SCS-SCSEEEEETTEEEEEETT---EEEEEECCTTCCE
T ss_pred CCC-CCCEEEEeCCeEEEEeCC---EEEEEECCccEEe
Confidence 121 233445568999999876 8899998776533
No 241
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.16 E-value=4.7 Score=36.33 Aligned_cols=187 Identities=12% Similarity=0.166 Sum_probs=96.7
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEE
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVEC 200 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 200 (373)
++.++. .++.||+.... ...+.++|+.++.-..+.... .....+...-++.+|+..... ...+++
T Consensus 134 ~~la~d-~~g~lyv~d~~-------~~~I~~id~~~g~~~~~~~~~-~~~~ia~~~~g~~l~~~d~~~------~~~I~~ 198 (409)
T 3hrp_A 134 WGIAAV-GNNTVLAYQRD-------DPRVRLISVDDNKVTTVHPGF-KGGKPAVTKDKQRVYSIGWEG------THTVYV 198 (409)
T ss_dssp EEEEEC-STTEEEEEETT-------TTEEEEEETTTTEEEEEEETC-CBCBCEECTTSSEEEEEBSST------TCEEEE
T ss_pred eEEEEe-CCCCEEEEecC-------CCcEEEEECCCCEEEEeeccC-CCCceeEecCCCcEEEEecCC------CceEEE
Confidence 344433 47889998642 237999999988655443221 111111122245677765432 116889
Q ss_pred EeCCCCe-EEeccCCcc--ccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeeccc---CccCCcc---e
Q 017349 201 YDPESDT-WTTAAKLRM--GLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD---GMKEGWT---G 269 (373)
Q Consensus 201 yd~~t~~-W~~~~~~~~--~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~---~~~~~~~---~ 269 (373)
+|+.++. .+.+..... ....+..++. ++.||+... . ..+++||+.++....+.. ....... +
T Consensus 199 ~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~------~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 199 YMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-N------KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp EEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-T------CEEEEEETTTCCEEEEEECCCCSCCCCSSCCE
T ss_pred EEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-C------CcEEEEECCCCCEEEEecccccCCCCCCcccc
Confidence 9887653 233311111 1122333433 688998432 2 479999998876554411 0111111 2
Q ss_pred EEEEE-CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCC--------cccccceEEEEe-CCEEEEEeC
Q 017349 270 ISIVL-EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPC--------EVMHRPFAVNGV-EGKIYVVSS 330 (373)
Q Consensus 270 ~~~~~-~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~--------~~~~~~~~~~~~-~~~l~i~GG 330 (373)
.++.- ++.||+.... ...|++||++...-...+....+. .......+++.. +++||+...
T Consensus 272 ia~~p~~g~lyv~d~~-~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQN-LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp EEEETTTTEEEEEETT-TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred EEEeCCCCEEEEEeCC-CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 22222 5889988643 668999998765222222110000 001233455443 577998865
No 242
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.14 E-value=3.5 Score=39.22 Aligned_cols=114 Identities=16% Similarity=0.197 Sum_probs=67.9
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCcccc------ccccEEEECCEEEEEeCccCCCccCC
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRMGL------ARYDSAVMGSKMYVTEGWTWPFMFSP 244 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~------~~~~~~~~~~~lyv~gG~~~~~~~~~ 244 (373)
+.++.++++|+....+ .++.+|..|++ |+.-...+... ...+.++.+++||+.... .
T Consensus 63 ~P~v~~g~vyv~~~~~--------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d-------g 127 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS--------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD-------A 127 (582)
T ss_dssp CCEEETTEEEEEETTT--------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT-------T
T ss_pred ccEEECCEEEEEcCCC--------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC-------C
Confidence 3456799999986532 38999998875 98654332211 112345678999876432 4
Q ss_pred ceEEEeCCCCc--eeecccCccC--CcceEEEEECC------eEEEEeeC----CCcceEEEeCCCC--ceee
Q 017349 245 RGGVYDINKDT--WNLMSDGMKE--GWTGISIVLEG------KLFVISEH----GDCPMKQYNPDDD--TWRY 301 (373)
Q Consensus 245 ~i~~yd~~~~~--W~~~~~~~~~--~~~~~~~~~~~------~l~v~gg~----~~~~~~~yd~~~~--~W~~ 301 (373)
.++++|.++++ |+.-...... ......++.++ .+|+-... ....+..||.+++ .|+.
T Consensus 128 ~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 128 SVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 79999998885 8753221111 11112255566 66553211 1457999999876 4864
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.10 E-value=6.9 Score=38.06 Aligned_cols=118 Identities=24% Similarity=0.236 Sum_probs=66.3
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCC--eeeCCCCCCCCC--C-C-CCceEEEEeccCCEEEEEcCccCCCCCCccee
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGR--WFVLPPMPCPKA--V-C-PQAFACTSLPRQGKLFVLGGMRSDTETPMQST 149 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~--W~~~~~~~~~~~--~-~-~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~ 149 (373)
.++.+|+... ...++.+|..+.+ |+.-...+.... . + ....+.++. ++.||+... -..+
T Consensus 69 ~~g~vyv~~~-----~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~v~v~~~--------dg~l 133 (689)
T 1yiq_A 69 VDGVMYTTGP-----FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW--KGKVYVGVL--------DGRL 133 (689)
T ss_dssp ETTEEEEECG-----GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECT--------TSEE
T ss_pred ECCEEEEEcC-----CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE--CCEEEEEcc--------CCEE
Confidence 4778888643 3458899987765 776433321000 0 0 011223334 888888642 1268
Q ss_pred EEEeCCCCc--eeccCC-CCC--cceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEe
Q 017349 150 IMYRATTNQ--WQLASP-MLT--PRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTT 210 (373)
Q Consensus 150 ~~yd~~t~~--W~~~~~-~~~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~ 210 (373)
+.+|..|++ |+.-.. -+. .....+.++.++++|+-.+.. .......++.||..|++ |+.
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~--~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGA--EFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCT--TTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCC--ccCCCCEEEEEECCCCcEEEEe
Confidence 999998884 875432 111 112223455688887743221 11134579999999886 875
No 244
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=92.96 E-value=1.7 Score=39.31 Aligned_cols=141 Identities=6% Similarity=0.060 Sum_probs=69.4
Q ss_pred EEEEcCccCCCCCCcceeEEEeCCCCc---eec--cCCCC-CcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeC
Q 017349 132 LFVLGGMRSDTETPMQSTIMYRATTNQ---WQL--ASPML-TPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDP 203 (373)
Q Consensus 132 i~v~GG~~~~~~~~~~~~~~yd~~t~~---W~~--~~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~ 203 (373)
+++.|+.+ ..+.+||..+.. +.. ...+. ....-..++.. ++.+++.++.+ ..+.+||.
T Consensus 196 ~l~s~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-------g~i~i~d~ 261 (430)
T 2xyi_A 196 YLLSASDD-------HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-------QKLMIWDT 261 (430)
T ss_dssp EEEEECTT-------SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-------SEEEEEET
T ss_pred eEEEEeCC-------CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-------CeEEEEEC
Confidence 66676652 268889987732 211 11111 11112222322 45677776654 46889998
Q ss_pred CCCe-EEeccCCccccccccEEEE--CC-EEEEEeCccCCCccCCceEEEeCCCCc--eeecccCccCCcceEEEEE--C
Q 017349 204 ESDT-WTTAAKLRMGLARYDSAVM--GS-KMYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKEGWTGISIVL--E 275 (373)
Q Consensus 204 ~t~~-W~~~~~~~~~~~~~~~~~~--~~-~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~~~~~~~~~--~ 275 (373)
.+.. .+.+..+.........+.. ++ .+++.|+.+ ..+.+||..+.. -..+.. ... .. .++.+ +
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d------g~v~vwd~~~~~~~~~~~~~-h~~-~v-~~i~~sp~ 332 (430)
T 2xyi_A 262 RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD------KTVALWDLRNLKLKLHSFES-HKD-EI-FQVQWSPH 332 (430)
T ss_dssp TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCTTSCSEEEEC-CSS-CE-EEEEECSS
T ss_pred CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC------CeEEEEeCCCCCCCeEEeec-CCC-CE-EEEEECCC
Confidence 8753 1111111111111122222 34 378788766 578999997632 111111 111 11 11222 3
Q ss_pred C-eEEEEeeCCCcceEEEeCCC
Q 017349 276 G-KLFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 276 ~-~l~v~gg~~~~~~~~yd~~~ 296 (373)
+ .+++.|+. ...+.+||...
T Consensus 333 ~~~~l~s~~~-d~~i~iwd~~~ 353 (430)
T 2xyi_A 333 NETILASSGT-DRRLHVWDLSK 353 (430)
T ss_dssp CTTEEEEEET-TSCCEEEEGGG
T ss_pred CCCEEEEEeC-CCcEEEEeCCC
Confidence 3 56777765 56888888865
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.83 E-value=4.1 Score=34.82 Aligned_cols=146 Identities=13% Similarity=0.116 Sum_probs=78.7
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCCe
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESDT 207 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 207 (373)
++.||+.... ...++++|+..+. ...-.. +...++++.. ++++|+..... ....+..||+.+++
T Consensus 42 ~g~lyv~d~~-------~~~I~~~d~~g~~-~~~~~~--~~~p~gia~~~dG~l~vad~~~-----~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 42 DGTIFVTNHE-------VGEIVSITPDGNQ-QIHATV--EGKVSGLAFTSNGDLVATGWNA-----DSIPVVSLVKSDGT 106 (306)
T ss_dssp TSCEEEEETT-------TTEEEEECTTCCE-EEEEEC--SSEEEEEEECTTSCEEEEEECT-----TSCEEEEEECTTSC
T ss_pred CCCEEEEeCC-------CCeEEEECCCCce-EEEEeC--CCCceeEEEcCCCcEEEEeccC-----CcceEEEEcCCCCe
Confidence 6778887422 3378999987653 221111 1223344443 57788875321 11247889988888
Q ss_pred EEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCc---eeecc-----cCccC-CcceEEEEECCe
Q 017349 208 WTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDT---WNLMS-----DGMKE-GWTGISIVLEGK 277 (373)
Q Consensus 208 W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~---W~~~~-----~~~~~-~~~~~~~~~~~~ 277 (373)
.+.+...+..+.....+.. ++.+|+.... ...++++|+.++. |..-+ .+... ........-++.
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ 180 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQYLTADSY------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNF 180 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETT------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTE
T ss_pred EEEEEeCCCccccCcccccCCCcEEEEECC------CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCE
Confidence 7766555443333333322 4567775422 2478999987642 21111 00111 111111333567
Q ss_pred EEEEeeCCCcceEEEeCCC
Q 017349 278 LFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 278 l~v~gg~~~~~~~~yd~~~ 296 (373)
||+.... ...+++||.+.
T Consensus 181 lyv~d~~-~~~I~~~~~~~ 198 (306)
T 2p4o_A 181 LYVSNTE-KMLLLRIPVDS 198 (306)
T ss_dssp EEEEETT-TTEEEEEEBCT
T ss_pred EEEEeCC-CCEEEEEEeCC
Confidence 8887643 66899999875
No 246
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.83 E-value=4.3 Score=35.02 Aligned_cols=105 Identities=10% Similarity=0.147 Sum_probs=58.6
Q ss_pred CeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCce
Q 017349 179 GKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTW 256 (373)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W 256 (373)
+.+++.|+.+ ..+.+||..++.......+......-..+.. ++++++.|+.+ ..+.+||..++.-
T Consensus 54 g~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~ 120 (368)
T 3mmy_A 54 GNFLIAGSWA-------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD------KTAKMWDLSSNQA 120 (368)
T ss_dssp SEEEEEEETT-------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEE
T ss_pred ceEEEEECCC-------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC------CcEEEEEcCCCCc
Confidence 4777777764 3588888887433221112211111112222 56666677665 5789999998875
Q ss_pred eecccCccCCcceEEE--EECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 257 NLMSDGMKEGWTGISI--VLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 257 ~~~~~~~~~~~~~~~~--~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
..... .......... .-++++++.|+. ...+..||..+++
T Consensus 121 ~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~-dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 121 IQIAQ-HDAPVKTIHWIKAPNYSCVMTGSW-DKTLKFWDTRSSN 162 (368)
T ss_dssp EEEEE-CSSCEEEEEEEECSSCEEEEEEET-TSEEEEECSSCSS
T ss_pred eeecc-ccCceEEEEEEeCCCCCEEEEccC-CCcEEEEECCCCc
Confidence 54322 1111111112 235677777765 5689999987764
No 247
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.83 E-value=4 Score=34.71 Aligned_cols=63 Identities=16% Similarity=0.074 Sum_probs=33.5
Q ss_pred CeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccccc-EEEE-CC----EEEEEeCccCCCccCCceEEEeCC
Q 017349 179 GKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYD-SAVM-GS----KMYVTEGWTWPFMFSPRGGVYDIN 252 (373)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~-~~~~-~~----~lyv~gG~~~~~~~~~~i~~yd~~ 252 (373)
+.+++.|+.+ ..+..++...+....+..+........ ++.. ++ .+++.|+.+ ..+.+||..
T Consensus 182 ~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d------g~i~iwd~~ 248 (351)
T 3f3f_A 182 PEKLAVSALE-------QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD------GRIRIFKIT 248 (351)
T ss_dssp CCEEEEEETT-------EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT------SCEEEEEEE
T ss_pred CcEEEEecCC-------CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC------CeEEEEeCC
Confidence 5666666654 234555556665544433333222212 2222 33 677777765 467888876
Q ss_pred CC
Q 017349 253 KD 254 (373)
Q Consensus 253 ~~ 254 (373)
++
T Consensus 249 ~~ 250 (351)
T 3f3f_A 249 EK 250 (351)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 248
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.76 E-value=3.9 Score=34.56 Aligned_cols=135 Identities=14% Similarity=0.165 Sum_probs=70.2
Q ss_pred eeEEEeCCCCceeccCCCCCcce-eeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEE
Q 017349 148 STIMYRATTNQWQLASPMLTPRS-FFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAV 225 (373)
Q Consensus 148 ~~~~yd~~t~~W~~~~~~~~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~ 225 (373)
.+.+||..+++-.++-.+..... -.+++. -+++.++.|+.+ ..+.++|..+++-... +...........
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-------g~v~iw~~~~~~~~~~--~~~h~~~~~~~~ 116 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKRLRN--MTSHSARVGSLS 116 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEE--EECCSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-------CcEEEeecCCceeEEE--ecCccceEEEee
Confidence 69999999987655433322222 222222 256777777765 4688999988864322 111112222334
Q ss_pred ECCEEEEEeCccCCCccCCceEEEeCCCCceeeccc-CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 226 MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 226 ~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
.++.+.+.|+.. ..+..++..+........ .............+++.++.++. ...+.+||..+++
T Consensus 117 ~~~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-d~~i~iwd~~~~~ 183 (318)
T 4ggc_A 117 WNSYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN-DNLVNVWPSAPGE 183 (318)
T ss_dssp EETTEEEEEETT------SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET-TSCEEEEESSCBT
T ss_pred cCCCEEEEEecC------CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEec-CcceeEEECCCCc
Confidence 455666666544 345556655544322111 01111111112335666666654 5678889987643
No 249
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.63 E-value=4.4 Score=34.62 Aligned_cols=104 Identities=11% Similarity=0.101 Sum_probs=53.1
Q ss_pred CeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCcee
Q 017349 179 GKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWN 257 (373)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~ 257 (373)
+.+++.++.+ ..+.+||..+.+-...-..... .-.+++.. ++++++.|+.+ ..+.+||..+..-.
T Consensus 185 ~~~~~s~~~d-------~~i~i~d~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~D------g~i~iwd~~~~~~~ 250 (340)
T 4aow_A 185 NPIIVSCGWD-------KLVKVWNLANCKLKTNHIGHTG-YLNTVTVSPDGSLCASGGKD------GQAMLWDLNEGKHL 250 (340)
T ss_dssp SCEEEEEETT-------SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETT------CEEEEEETTTTEEE
T ss_pred CcEEEEEcCC-------CEEEEEECCCCceeeEecCCCC-cEEEEEECCCCCEEEEEeCC------CeEEEEEeccCcee
Confidence 3455555554 3478899888764332111111 01112222 67777777766 57889998876432
Q ss_pred ecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCce
Q 017349 258 LMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTW 299 (373)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W 299 (373)
..-. . ...........+..++.++. ...+.+||.++..-
T Consensus 251 ~~~~-~-~~~v~~~~~~~~~~~~~~~~-d~~i~iwd~~~~~~ 289 (340)
T 4aow_A 251 YTLD-G-GDIINALCFSPNRYWLCAAT-GPSIKIWDLEGKII 289 (340)
T ss_dssp EEEE-C-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEE
T ss_pred eeec-C-CceEEeeecCCCCceeeccC-CCEEEEEECCCCeE
Confidence 2111 1 11111112233444445544 45788899876643
No 250
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.54 E-value=7 Score=36.77 Aligned_cols=132 Identities=10% Similarity=0.033 Sum_probs=69.0
Q ss_pred eEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEE-EC
Q 017349 149 TIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAV-MG 227 (373)
Q Consensus 149 ~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~-~~ 227 (373)
+.+||..+++-+++...+. ......-+++..++++.+ .. ....++++|..+++.+.+..-.... ...+. -+
T Consensus 134 ~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~--~~-~~~~i~~~d~~~g~~~~l~~~~~~~--~~~~~SpD 205 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFF--GG-GRVSLFTSNLSSGGLRVFDSGEGSF--SSASISPG 205 (582)
T ss_dssp EEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEE--ET-TEEEEEEEETTTCCCEEECCSSCEE--EEEEECTT
T ss_pred ceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEc--CC-CCeEEEEEcCCCCCceEeecCCCcc--ccceECCC
Confidence 4478988887666543332 212222355555544432 11 1245999999999888764322211 12222 26
Q ss_pred CEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEE--------EEECCeEEEEeeCCCcceEEEeC
Q 017349 228 SKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGIS--------IVLEGKLFVISEHGDCPMKQYNP 294 (373)
Q Consensus 228 ~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~--------~~~~~~l~v~gg~~~~~~~~yd~ 294 (373)
|+.++.+..+ ....++++|.++++.+.+.. ......... ..-+|++++.+.. ...+..|+.
T Consensus 206 G~~l~~~~~~----~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~~~~~~~-~g~~~l~~~ 274 (582)
T 3o4h_A 206 MKVTAGLETA----REARLVTVDPRDGSVEDLEL-PSKDFSSYRPTAITWLGYLPDGRLAVVARR-EGRSAVFID 274 (582)
T ss_dssp SCEEEEEECS----SCEEEEEECTTTCCEEECCC-SCSHHHHHCCSEEEEEEECTTSCEEEEEEE-TTEEEEEET
T ss_pred CCEEEEccCC----CeeEEEEEcCCCCcEEEccC-CCcChhhhhhccccceeEcCCCcEEEEEEc-CCcEEEEEE
Confidence 6654443322 12478999999888763322 111000011 2236677776654 446777777
No 251
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=92.48 E-value=4.5 Score=36.32 Aligned_cols=149 Identities=9% Similarity=0.031 Sum_probs=76.8
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceecc-CCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLA-SPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
++.+++.|+.+ ..+.+||..+.+-... ...+....-.+++.. +++.++.|+.+ ..+.+||..++
T Consensus 181 ~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~ 246 (437)
T 3gre_A 181 EKSLLVALTNL-------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-------GIIDIWDIRFN 246 (437)
T ss_dssp SCEEEEEEETT-------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-------SCEEEEETTTT
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-------CeEEEEEcCCc
Confidence 57777777652 2789999988753222 111111112222222 56677777664 35889999887
Q ss_pred eEEeccCCccccccccEEEE-----CCEEEEEeCccCCCccCCceEEEeCCCCceee-ccc-----------Cc------
Q 017349 207 TWTTAAKLRMGLARYDSAVM-----GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-MSD-----------GM------ 263 (373)
Q Consensus 207 ~W~~~~~~~~~~~~~~~~~~-----~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-~~~-----------~~------ 263 (373)
+....-.++....-...+.. ++.+++.|+.+ ..+.+||..+++-.. +.. +.
T Consensus 247 ~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (437)
T 3gre_A 247 VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEE 320 (437)
T ss_dssp EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT------EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGG
T ss_pred cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC------CcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccc
Confidence 54322111111000111111 35566666655 468889987665211 100 00
Q ss_pred -------cCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCc
Q 017349 264 -------KEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 264 -------~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
........+..++++++.|+. ...+..||..+.+
T Consensus 321 ~~~~~~~~~~~v~~l~~~~~~~l~s~~~-d~~i~~wd~~~~~ 361 (437)
T 3gre_A 321 LNFCGIRSLNALSTISVSNDKILLTDEA-TSSIVMFSLNELS 361 (437)
T ss_dssp CCCCCCCSGGGGCCEEEETTEEEEEEGG-GTEEEEEETTCGG
T ss_pred ceecccccCCceEEEEECCceEEEecCC-CCeEEEEECCCcc
Confidence 000111123347777777775 5689999988764
No 252
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=92.37 E-value=3.5 Score=32.92 Aligned_cols=134 Identities=16% Similarity=0.156 Sum_probs=73.5
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCC----------ceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceE
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTN----------QWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAV 198 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~----------~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 198 (373)
++++|+|-|. .+|+++...- .|.. +|. ....+....++++|++-|.. .
T Consensus 15 ~g~~~fFkg~---------~~w~~~~~~~~~gyP~~I~~~w~g---lP~-~iDAa~~~~~g~~yfFkg~~---------y 72 (196)
T 3c7x_A 15 RGEMFVFKER---------WFWRVRNNQVMDGYPMPIGQFWRG---LPA-SINTAYERKDGKFVFFKGDK---------H 72 (196)
T ss_dssp TTEEEEEETT---------EEEEEETTEECTTCSEEHHHHSTT---CCS-SCCEEEECTTSCEEEEETTE---------E
T ss_pred CCEEEEEECC---------EEEEEECCccCCCCceEhhHhccC---CCC-CccEEEEeCCCcEEEecCCE---------E
Confidence 8999999774 5777764321 1222 222 22222222468899997753 7
Q ss_pred EEEeCCCCeE---EeccC----CccccccccEEE-E--CCEEEEEeCccCCCccCCceEEEeCCCCceee-----ccc--
Q 017349 199 ECYDPESDTW---TTAAK----LRMGLARYDSAV-M--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-----MSD-- 261 (373)
Q Consensus 199 ~~yd~~t~~W---~~~~~----~~~~~~~~~~~~-~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-----~~~-- 261 (373)
++|+..+... +.+.. +|.. .--+|. . ++++|++-| +..++||..+++-.. +..
T Consensus 73 w~~~~~~~~~gyPk~I~~~~~glP~~--~IDAA~~~~~~g~~yfFkG--------~~yw~yd~~~~~v~~gyPk~i~~~~ 142 (196)
T 3c7x_A 73 WVFDEASLEPGYPKHIKELGRGLPTD--KIDAALFWMPNGKTYFFRG--------NKYYRFNEELRAVDSEYPKNIKVWE 142 (196)
T ss_dssp EEEETTEECTTCSEEGGGTCBSCCSS--CCSEEEEETTTTEEEEEET--------TEEEEEETTTTEECTTCSEEGGGSB
T ss_pred EEEeCCcccCCCCeEhhhcCCCCCCC--cccEEEEEccCCEEEEEEC--------CEEEEEeCCcccccCCCCccHHHCC
Confidence 7887542110 12222 3321 222333 2 689999977 457899987754321 111
Q ss_pred CccCCcceEEEEE-CC-eEEEEeeCCCcceEEEeCCCCc
Q 017349 262 GMKEGWTGISIVL-EG-KLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 262 ~~~~~~~~~~~~~-~~-~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
.++.. ..++... ++ ++|.+-|. ..++||..+++
T Consensus 143 gip~~-idaAf~~~~~~~~YfFkg~---~y~r~d~~~~~ 177 (196)
T 3c7x_A 143 GIPES-PRGSFMGSDEVFTYFYKGN---KYWKFNNQKLK 177 (196)
T ss_dssp TCCSS-CSEEEECTTSSEEEEEETT---EEEEEETTTTE
T ss_pred CcCCC-cceeEEecCCCEEEEEECC---EEEEEECCcce
Confidence 11111 2223333 44 89999876 88999987753
No 253
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.34 E-value=5.1 Score=34.71 Aligned_cols=62 Identities=16% Similarity=0.101 Sum_probs=31.7
Q ss_pred CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCc
Q 017349 227 GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 227 ~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
++++++.|+.+ ..+.+||+.+..-....... .... ..+.+ ++.++..|. ...+..||..+.+
T Consensus 224 ~g~~l~sgs~d------g~v~iwd~~~~~~~~~~~~~-~~~v-~~v~~sp~~~~la~~~--d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 224 NGKYIATGGKD------KKLLIWDILNLTYPQREFDA-GSTI-NQIAFNPKLQWVAVGT--DQGVKIFNLMTQS 287 (343)
T ss_dssp TSSEEEEEETT------CEEEEEESSCCSSCSEEEEC-SSCE-EEEEECSSSCEEEEEE--SSCEEEEESSSCC
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcccceeecC-CCcE-EEEEECCCCCEEEEEC--CCCEEEEEeCCCC
Confidence 67777777766 57889998433211100001 1111 12222 455544443 3468888886653
No 254
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=92.32 E-value=7.9 Score=36.82 Aligned_cols=159 Identities=9% Similarity=0.097 Sum_probs=84.2
Q ss_pred EEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccC-C--C---CCcceeeeeeEe-CCeEEEEcCCCCCCCCc
Q 017349 122 ACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLAS-P--M---LTPRSFFASGNV-NGKIMAVGGTGANINET 194 (373)
Q Consensus 122 ~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~-~--~---~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~ 194 (373)
.+..+..++.+++.|+.++ .+.+||..+++-...- . + .....-.+++.. +++.++.|+.+
T Consensus 194 ~~v~fspdg~~las~s~D~-------~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D------ 260 (611)
T 1nr0_A 194 HSVRYNPDGSLFASTGGDG-------TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD------ 260 (611)
T ss_dssp EEEEECTTSSEEEEEETTS-------CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT------
T ss_pred EEEEECCCCCEEEEEECCC-------cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC------
Confidence 3444455788888877632 6888998777543211 1 0 111111222222 56677777765
Q ss_pred CceEEEEeCCCCeEEeccCCccc-cccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEE
Q 017349 195 MTAVECYDPESDTWTTAAKLRMG-LARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIV 273 (373)
Q Consensus 195 ~~~~~~yd~~t~~W~~~~~~~~~-~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~ 273 (373)
..+.++|..+.+....-..... ......+..++..++.++.+ ..+..||+.++.-...-..........+..
T Consensus 261 -~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d------~~i~~~~~~~~~~~~~~~gh~~~v~~l~~s 333 (611)
T 1nr0_A 261 -KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN------GFINFVNPELGSIDQVRYGHNKAITALSSS 333 (611)
T ss_dssp -SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT------CCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred -CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCC------CcEEEEeCCCCCcceEEcCCCCCEEEEEEe
Confidence 4688999988876432211111 11112333466666666554 467888887765222111111111111112
Q ss_pred ECCeEEEEeeCCCcceEEEeCCCCceee
Q 017349 274 LEGKLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 274 ~~~~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
-+++.++.|+. ...+..||..+++...
T Consensus 334 pdg~~l~s~s~-D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 334 ADGKTLFSADA-EGHINSWDISTGISNR 360 (611)
T ss_dssp TTSSEEEEEET-TSCEEEEETTTCCEEE
T ss_pred CCCCEEEEEeC-CCcEEEEECCCCceee
Confidence 25676666665 5689999998776544
No 255
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=92.31 E-value=4.8 Score=34.35 Aligned_cols=138 Identities=16% Similarity=0.324 Sum_probs=70.7
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCC-CCceeccCCCCCcceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRAT-TNQWQLASPMLTPRSFFASGNV-NGKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~-t~~W~~~~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
++.||+... ...+++||+. ...|+.....+ ...+.+.. ++.+|+.. .+ ..++.||+...
T Consensus 107 ~~~l~v~t~--------~~~l~~~d~~g~~~~~~~~~~~---~~~~~~~~~~g~l~vgt-~~-------~~l~~~d~~g~ 167 (330)
T 3hxj_A 107 EDILYVTSM--------DGHLYAINTDGTEKWRFKTKKA---IYATPIVSEDGTIYVGS-ND-------NYLYAINPDGT 167 (330)
T ss_dssp TTEEEEECT--------TSEEEEECTTSCEEEEEECSSC---CCSCCEECTTSCEEEEC-TT-------SEEEEECTTSC
T ss_pred CCEEEEEec--------CCEEEEEcCCCCEEEEEcCCCc---eeeeeEEcCCCEEEEEc-CC-------CEEEEECCCCC
Confidence 788887532 1268999988 22465432211 11222333 66777643 21 35889998822
Q ss_pred -eEEeccCCccccccccEEE-ECCEEEEEeCccCCCccCCceEEEeCCC-CceeecccCccCCcceEEEEECCeEEEEee
Q 017349 207 -TWTTAAKLRMGLARYDSAV-MGSKMYVTEGWTWPFMFSPRGGVYDINK-DTWNLMSDGMKEGWTGISIVLEGKLFVISE 283 (373)
Q Consensus 207 -~W~~~~~~~~~~~~~~~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg 283 (373)
.|+.-.. .... .+.+. .++.||+.. ..+++||... ..|+.... . .........-+|.||+...
T Consensus 168 ~~~~~~~~--~~~~-~~~~~d~~g~l~v~t---------~~l~~~d~~g~~~~~~~~~-~-~~~~~~~~~~~g~l~v~t~ 233 (330)
T 3hxj_A 168 EKWRFKTN--DAIT-SAASIGKDGTIYFGS---------DKVYAINPDGTEKWNFYAG-Y-WTVTRPAISEDGTIYVTSL 233 (330)
T ss_dssp EEEEEECS--SCCC-SCCEECTTCCEEEES---------SSEEEECTTSCEEEEECCS-S-CCCSCCEECTTSCEEEEET
T ss_pred EeEEEecC--CCce-eeeEEcCCCEEEEEe---------CEEEEECCCCcEEEEEccC-C-cceeceEECCCCeEEEEcC
Confidence 2654321 1111 22233 367777654 3688999432 24654322 1 1111111222457777543
Q ss_pred CCCcceEEEeCCCCc-eee
Q 017349 284 HGDCPMKQYNPDDDT-WRY 301 (373)
Q Consensus 284 ~~~~~~~~yd~~~~~-W~~ 301 (373)
...+.+||+..+. |..
T Consensus 234 --~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 234 --DGHLYAINPDGTEKWRF 250 (330)
T ss_dssp --TTEEEEECTTSCEEEEE
T ss_pred --CCeEEEECCCCCEeEEe
Confidence 3478888875543 443
No 256
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=92.09 E-value=3.5 Score=32.93 Aligned_cols=132 Identities=13% Similarity=0.111 Sum_probs=71.2
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCC--eE--Eec----cCCccccccccEEEE---CCEEEEEeCccCCCc
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESD--TW--TTA----AKLRMGLARYDSAVM---GSKMYVTEGWTWPFM 241 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~--~W--~~~----~~~~~~~~~~~~~~~---~~~lyv~gG~~~~~~ 241 (373)
+++..++++|++-|.. .++++.... .. ..+ +.+|.. --|+.. ++++|+|-|
T Consensus 11 Ai~~~~g~~yfFkg~~---------~Wr~~~~~~~~~~~p~~Is~~w~glP~~---IDAa~~~~~~~~~yfFkG------ 72 (195)
T 1itv_A 11 AIAEIGNQLYLFKDGK---------YWRFSEGRGSRPQGPFLIADKWPALPRK---LDSVFEEPLSKKLFFFSG------ 72 (195)
T ss_dssp EEEEETTEEEEEETTE---------EEEECCSSSCCCEEEEEHHHHCTTSCSS---CSEEEECTTTCCEEEEET------
T ss_pred EEEEeCCEEEEEECCE---------EEEEECCccccCCCcEEhhhccCCCCCC---ccEEEEECCCCeEEEEeC------
Confidence 4555789999997753 666765442 11 111 233432 223332 688999987
Q ss_pred cCCceEEEeCCCCce-eeccc-CccC--CcceEEEE-ECCeEEEEeeCCCcceEEEeCCCCceee-----ecC--CCCCC
Q 017349 242 FSPRGGVYDINKDTW-NLMSD-GMKE--GWTGISIV-LEGKLFVISEHGDCPMKQYNPDDDTWRY-----VGG--DKFPC 309 (373)
Q Consensus 242 ~~~~i~~yd~~~~~W-~~~~~-~~~~--~~~~~~~~-~~~~l~v~gg~~~~~~~~yd~~~~~W~~-----~~~--~~~~~ 309 (373)
+..++|+..+..- +.+.. .++. ....++.. .++++|++-|. ..|+||..+++-.. +.. ..+|
T Consensus 73 --~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~---~ywr~d~~~~~~~~gyPr~i~~~w~Gvp- 146 (195)
T 1itv_A 73 --RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR---RLWRFDVKAQMVDPRSASEVDRMFPGVP- 146 (195)
T ss_dssp --TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT---EEEEEETTTTEECGGGCEEHHHHSTTSC-
T ss_pred --CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC---EEEEEeCCcccccCCCccChhhcCCCCC-
Confidence 3567777542111 01111 1111 12223322 36899999775 88999987653211 110 1223
Q ss_pred cccccceEEEEeCCEEEEEeCC
Q 017349 310 EVMHRPFAVNGVEGKIYVVSSG 331 (373)
Q Consensus 310 ~~~~~~~~~~~~~~~l~i~GG~ 331 (373)
...-++...++.+|++-|.
T Consensus 147 ---~~idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 147 ---LDTHDVFQFREKAYFCQDR 165 (195)
T ss_dssp ---SSCSEEEEETTEEEEEETT
T ss_pred ---CCCCEEEEeCCeEEEEeCC
Confidence 2334555667999999985
No 257
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.95 E-value=1.5 Score=41.59 Aligned_cols=176 Identities=13% Similarity=0.040 Sum_probs=91.0
Q ss_pred EEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeee
Q 017349 95 QALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFAS 174 (373)
Q Consensus 95 ~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~ 174 (373)
.+||..+.+...+...+ . ...+ ...+|+.+++++... .....++++|..+++.+.+..-.. .....
T Consensus 135 ~l~d~~~g~~~~l~~~~-------~-~~~~-~spDG~~la~~~~~~---~~~~~i~~~d~~~g~~~~l~~~~~--~~~~~ 200 (582)
T 3o4h_A 135 ALYALDGGGLRELARLP-------G-FGFV-SDIRGDLIAGLGFFG---GGRVSLFTSNLSSGGLRVFDSGEG--SFSSA 200 (582)
T ss_dssp EEEEEETTEEEEEEEES-------S-CEEE-EEEETTEEEEEEEEE---TTEEEEEEEETTTCCCEEECCSSC--EEEEE
T ss_pred eEEEccCCcEEEeecCC-------C-ceEE-ECCCCCEEEEEEEcC---CCCeEEEEEcCCCCCceEeecCCC--ccccc
Confidence 36788777666554333 1 2222 222555555544321 122469999999998887643321 11222
Q ss_pred eE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccccccc-------EEEECCEEEEEeCccCCCccCCce
Q 017349 175 GN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYD-------SAVMGSKMYVTEGWTWPFMFSPRG 246 (373)
Q Consensus 175 ~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~-------~~~~~~~lyv~gG~~~~~~~~~~i 246 (373)
+. -+++.++.+..+ ....++++|..+++.+.+........... ...-+|++++.+..+ ..+
T Consensus 201 ~~SpDG~~l~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~------g~~ 269 (582)
T 3o4h_A 201 SISPGMKVTAGLETA-----REARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE------GRS 269 (582)
T ss_dssp EECTTSCEEEEEECS-----SCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET------TEE
T ss_pred eECCCCCEEEEccCC-----CeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcC------CcE
Confidence 22 245544433222 23579999999988773332211111111 022367777776554 356
Q ss_pred EEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCC--CcceEEEeCCCCceeee
Q 017349 247 GVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHG--DCPMKQYNPDDDTWRYV 302 (373)
Q Consensus 247 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~--~~~~~~yd~~~~~W~~~ 302 (373)
.+|+. ++.... +.......+.. ++++++.++.. ...++.+|... +.+.+
T Consensus 270 ~l~~~--g~~~~~---~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 270 AVFID--GERVEA---PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp EEEET--TEEECC---CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred EEEEE--CCeecc---CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 77777 444331 11111122234 88888776543 34677888765 44443
No 258
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=91.93 E-value=0.19 Score=44.86 Aligned_cols=106 Identities=6% Similarity=-0.065 Sum_probs=45.2
Q ss_pred eEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--EEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCC
Q 017349 175 GNVNGKIMAVGGTGANINETMTAVECYDPESDT--WTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDIN 252 (373)
Q Consensus 175 ~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~ 252 (373)
++.++.+|+.+. + ..++.+|..+++ |+.-. .+ .....++.++++|+.+..+ ..++++|.+
T Consensus 6 ~v~~~~v~~gs~-d-------g~v~a~d~~tG~~~W~~~~---~~-~~s~p~~~~g~~~v~~s~d------g~l~a~d~~ 67 (369)
T 2hz6_A 6 TLPETLLFVSTL-D-------GSLHAVSKRTGSIKWTLKE---DP-VLQVPTHVEEPAFLPDPND------GSLYTLGSK 67 (369)
T ss_dssp --CTTEEEEEET-T-------SEEEEEETTTCCEEEEEEC---CC-SCCCC-----CCEEECTTT------CCEEEC---
T ss_pred eeeCCEEEEEcC-C-------CEEEEEECCCCCEEEEecC---CC-ceecceEcCCCEEEEeCCC------CEEEEEECC
Confidence 345667776533 2 258999988874 86543 11 1123344577788876544 468999987
Q ss_pred CC--ceeecccCccCCcceEEEE-ECCeEEEEeeCCCcceEEEeCCCC--ceee
Q 017349 253 KD--TWNLMSDGMKEGWTGISIV-LEGKLFVISEHGDCPMKQYNPDDD--TWRY 301 (373)
Q Consensus 253 ~~--~W~~~~~~~~~~~~~~~~~-~~~~l~v~gg~~~~~~~~yd~~~~--~W~~ 301 (373)
++ .|+.-.. .+.......++ .++.||+-+. ...+..+|++++ .|+.
T Consensus 68 tG~~~w~~~~~-~~~~~~~sp~~~~~~~v~~g~~--dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 68 NNEGLTKLPFT-IPELVQASPCRSSDGILYMGKK--QDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp --CCSEECSCC-HHHHHTTCSCC-----CCCCEE--EEEEEEECCC--------
T ss_pred CCceeeeeecc-CccccccCceEecCCEEEEEeC--CCEEEEEECCCCcEEEEe
Confidence 65 4653211 11100111122 4566654322 347899998865 4554
No 259
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=91.75 E-value=7.7 Score=35.48 Aligned_cols=138 Identities=10% Similarity=0.119 Sum_probs=76.2
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCC---------CCceeccCCCCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCce
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRAT---------TNQWQLASPMLTPRSFFASGN--VNGKIMAVGGTGANINETMTA 197 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~---------t~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 197 (373)
++.+|+|-|. .+|+++.. +..|..+|. ..-++.. .++++|+|-|..
T Consensus 272 ~ge~y~Fkg~---------~~wr~~~~~~~~~p~~I~~~Wp~LP~-----~iDAa~~~~~~g~~~fFKg~~--------- 328 (450)
T 1su3_A 272 RGEVMFFKDR---------FYMRTNPFYPEVELNFISVFWPQLPN-----GLEAAYEFADRDEVRFFKGNK--------- 328 (450)
T ss_dssp TTEEEEEETT---------EEEECCTTSSSCEEEEGGGTCTTSCS-----SCCEEEEEGGGTEEEEEETTE---------
T ss_pred CCeEEEEeCC---------EEEEEcCCCCcccceehhHhccCCCC-----CeeEEEEEcCCCeEEEEeCCE---------
Confidence 8999999774 45555543 334444432 1112222 268999997753
Q ss_pred EEEEeCCCC--eE-Eecc---CCccccccccEE-EE--CCEEEEEeCccCCCccCCceEEEeCCCCceee-----ccc--
Q 017349 198 VECYDPESD--TW-TTAA---KLRMGLARYDSA-VM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-----MSD-- 261 (373)
Q Consensus 198 ~~~yd~~t~--~W-~~~~---~~~~~~~~~~~~-~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-----~~~-- 261 (373)
.++|+..+- .+ +.+. .+|.....--++ .. ++++|+|-| +..++||..+++-.. +..
T Consensus 329 ~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG--------~~yw~yd~~~~~~~~gYPk~I~~~f 400 (450)
T 1su3_A 329 YWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA--------NKYWRYDEYKRSMDPGYPKMIAHDF 400 (450)
T ss_dssp EEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTEECSSCSEEHHHHS
T ss_pred EEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC--------CEEEEEeCCCccccCCCCcchhhcC
Confidence 667764321 01 1111 122211122233 33 689999977 468999986543221 110
Q ss_pred -CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceee
Q 017349 262 -GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 262 -~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
..+. ...+++..++++|.+-|. ..|+||..+++-..
T Consensus 401 pgip~-~iDAA~~~~g~~YFFkg~---~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 401 PGIGH-KVDAVFMKDGFFYFFHGT---RQYKFDPKTKRILT 437 (450)
T ss_dssp TTSCS-CCSEEEEETTEEEEEETT---EEEEEETTTTEEEE
T ss_pred CCCCC-CccEEEEcCCeEEEEeCC---EEEEEECCcceEec
Confidence 1111 233445578999999876 88999988765443
No 260
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.68 E-value=6.9 Score=34.82 Aligned_cols=188 Identities=13% Similarity=0.155 Sum_probs=98.2
Q ss_pred eeEEEeCCC--CceeccCCCCCcceeeeeeEe---CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCC---cccc-
Q 017349 148 STIMYRATT--NQWQLASPMLTPRSFFASGNV---NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKL---RMGL- 218 (373)
Q Consensus 148 ~~~~yd~~t--~~W~~~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~---~~~~- 218 (373)
-+++++... .+|+...........++++.. .+.||+.+... . .-..+++.+-...+|+.+... +...
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g--~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~ 107 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG--H--LGPTVFRSDDGGGNWTEATRPPAFNKAPE 107 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC------CCEEEEEESSTTSCCEECSBCCCCCCCC-
T ss_pred ceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC--C--CCccEEEeCCCCCCceECCccccCCCccc
Confidence 477777655 689876422222333444443 46788765321 0 112466776677889988532 2111
Q ss_pred -----c--c-ccEEEE----CCEEEEEeCccCCCccCCceEEEeCCCCceeecccC--ccC--------------CcceE
Q 017349 219 -----A--R-YDSAVM----GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDG--MKE--------------GWTGI 270 (373)
Q Consensus 219 -----~--~-~~~~~~----~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~--~~~--------------~~~~~ 270 (373)
. . .+.++. .+.||+.+.. ..+++.+....+|+.+... .+. ...-.
T Consensus 108 ~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~-------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~ 180 (394)
T 3b7f_A 108 GETGRVVDHVFWLTPGHASEPGTWYAGTSP-------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH 180 (394)
T ss_dssp ---CCCCCEEEEEEECCTTSTTCEEEEEET-------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE
T ss_pred ccccccccceeEEEeCCCCCCCEEEEEecC-------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCcee
Confidence 0 1 112222 4677765421 3678888888899987531 011 11112
Q ss_pred EEEE----CCeEEEEeeCCCcceEEEeCCCCceeeecCCC----CCCcc---cccceEEEEe-C--CEEEEEeCCceeee
Q 017349 271 SIVL----EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDK----FPCEV---MHRPFAVNGV-E--GKIYVVSSGLNVAI 336 (373)
Q Consensus 271 ~~~~----~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~----~~~~~---~~~~~~~~~~-~--~~l~i~GG~~~~~~ 336 (373)
.+.+ .+.||+.... ..+++.+-..++|+.+.... +|... ....+.++.. . +.||+..+.
T Consensus 181 ~i~~d~~~~~~l~vg~~~--ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~----- 253 (394)
T 3b7f_A 181 SILVDPRDPKHLYIGMSS--GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHC----- 253 (394)
T ss_dssp EEEECTTCTTCEEEEEET--BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETT-----
T ss_pred EEEECCCCCCEEEEEECC--CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCC-----
Confidence 2333 3568876543 25888877778999875311 11000 0112344333 2 667775432
Q ss_pred eEEEEeecCCcccceEEecC
Q 017349 337 GRVYEEQNGGISAEWKVMTA 356 (373)
Q Consensus 337 ~~~~~~~~d~~~~~W~~~~~ 356 (373)
.++. .+.....|+.+..
T Consensus 254 -gl~~--s~D~G~tW~~~~~ 270 (394)
T 3b7f_A 254 -GIYR--MDRREGVWKRIGD 270 (394)
T ss_dssp -EEEE--EETTTTEEECGGG
T ss_pred -eEEE--eCCCCCcceECCC
Confidence 2444 4566678887753
No 261
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=91.56 E-value=7 Score=34.64 Aligned_cols=138 Identities=9% Similarity=0.035 Sum_probs=76.9
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCC---------ceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCce
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTN---------QWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTA 197 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~---------~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 197 (373)
++++|+|-|. .+|+++.... .|..+| .... ++... ++++|+|-|..
T Consensus 190 ~g~~~fFkg~---------~~Wr~~~~~~~~~p~~I~~~wpgLP----~~iD-Aa~~~~~~g~~~fFkg~~--------- 246 (365)
T 3ba0_A 190 GNKIFFFKDR---------FFWLKVSERPKTSVNLISSLWPTLP----SGIE-AAYEIEARNQVFLFKDDK--------- 246 (365)
T ss_dssp TTEEEEEETT---------EEEECCSSCCCCCEEEHHHHCSSCC----SSCC-EEEEEGGGTEEEEEETTE---------
T ss_pred CCeEEEEeCC---------EEEEEcCCCccCCccchhhhccCCC----CCcc-EEEEecCCCEEEEEeCCE---------
Confidence 8999999764 4677665432 233333 1112 22233 78999997753
Q ss_pred EEEEeCCCCe--E-EeccC--CccccccccEEE-E--CCEEEEEeCccCCCccCCceEEEeCCCCceee-----ccc---
Q 017349 198 VECYDPESDT--W-TTAAK--LRMGLARYDSAV-M--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-----MSD--- 261 (373)
Q Consensus 198 ~~~yd~~t~~--W-~~~~~--~~~~~~~~~~~~-~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-----~~~--- 261 (373)
.++|+..... + +.+.. +|.....--+++ . ++++|+|-| +..++||..+++-.. +..
T Consensus 247 yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~yd~~~~~v~~gyPk~I~~~f~ 318 (365)
T 3ba0_A 247 YWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRYDERRQMMDPGYPKLITKNFQ 318 (365)
T ss_dssp EEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEEETTTTEECSSCCCCHHHHST
T ss_pred EEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEeCCcceecCCCCcchhhcCC
Confidence 6666543211 1 22332 232111222333 3 589999977 468899987654321 100
Q ss_pred CccCCcceEEEEE-CCeEEEEeeCCCcceEEEeCCCCceee
Q 017349 262 GMKEGWTGISIVL-EGKLFVISEHGDCPMKQYNPDDDTWRY 301 (373)
Q Consensus 262 ~~~~~~~~~~~~~-~~~l~v~gg~~~~~~~~yd~~~~~W~~ 301 (373)
..+. ...++... ++++|.+-|. ..|+||..+++-..
T Consensus 319 g~p~-~iDaA~~~~~g~~YfFkg~---~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 319 GIGP-KIDAVFYSKNKYYYFFQGS---NQFEYDFLLQRITK 355 (365)
T ss_dssp TCCS-SCSEEEEETTTEEEEEETT---EEEEEETTTTEEEE
T ss_pred CCCC-ccceeeEecCCcEEEEeCC---EEEEEECCccEEec
Confidence 1111 22333445 8999999775 89999998775544
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=91.50 E-value=7.9 Score=35.12 Aligned_cols=224 Identities=6% Similarity=-0.005 Sum_probs=113.1
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+.-.. ..+.+||+.++....+.... ..-.+.++...++.||+...... .....++.++...
T Consensus 149 ~g~Lyv~d~~-----~~I~~id~~~~~v~~~~~~~------~~P~~ia~d~~G~~lyvad~~~~---~~~~~v~~~~~~g 214 (430)
T 3tc9_A 149 HNHLYLVGEQ-----HPTRLIDFEKEYVSTVYSGL------SKVRTICWTHEADSMIITNDQNN---NDRPNNYILTRES 214 (430)
T ss_dssp EEEEEEEEBT-----EEEEEEETTTTEEEEEECCC------SCEEEEEECTTSSEEEEEECCSC---TTSEEEEEEEGGG
T ss_pred CCeEEEEeCC-----CcEEEEECCCCEEEEEecCC------CCcceEEEeCCCCEEEEEeCCCC---cccceEEEEeCCC
Confidence 3567766432 67889999988777664321 12344454443456999864321 1223466676543
Q ss_pred CceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CCE-EEE
Q 017349 157 NQWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GSK-MYV 232 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~-lyv 232 (373)
.+.....+..-...+.+++. ++.||+.--. ...+++||+.+..-..+...+........++. +|+ ||+
T Consensus 215 -~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~-------~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv 286 (430)
T 3tc9_A 215 -GFKVITELTKGQNCNGAETHPINGELYFNSWN-------AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYI 286 (430)
T ss_dssp -TSCSEEEEEECSSCCCEEECTTTCCEEEEETT-------TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred -ceeeeeeeccCCCceEEEEeCCCCEEEEEECC-------CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEE
Confidence 33311111111222334443 6788887432 24699999987765333222211111123332 455 888
Q ss_pred EeCccCCCccCCceEEEeCCC--Cceee---cccC-cc----------CCc-ceE-EEEE----------CCeEEEEeeC
Q 017349 233 TEGWTWPFMFSPRGGVYDINK--DTWNL---MSDG-MK----------EGW-TGI-SIVL----------EGKLFVISEH 284 (373)
Q Consensus 233 ~gG~~~~~~~~~~i~~yd~~~--~~W~~---~~~~-~~----------~~~-~~~-~~~~----------~~~l~v~gg~ 284 (373)
.-... +.|.++|... +.... +... -. ... ... .+.. ++.||+....
T Consensus 287 ~d~~~------~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~ 360 (430)
T 3tc9_A 287 VVVNQ------HYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE 360 (430)
T ss_dssp EETTT------TEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG
T ss_pred EECCC------CEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC
Confidence 75433 5677766542 33211 1100 00 001 111 2322 3689988643
Q ss_pred CCcceEEEeCCCCceeeecCCC---C--------C-CcccccceEEEEe--CCEEEEEeC
Q 017349 285 GDCPMKQYNPDDDTWRYVGGDK---F--------P-CEVMHRPFAVNGV--EGKIYVVSS 330 (373)
Q Consensus 285 ~~~~~~~yd~~~~~W~~~~~~~---~--------~-~~~~~~~~~~~~~--~~~l~i~GG 330 (373)
...|.++|++ +....+...+ . + ........+++.. ++.|||.--
T Consensus 361 -n~~I~~i~~~-G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 418 (430)
T 3tc9_A 361 -NHCIRILTPQ-GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR 418 (430)
T ss_dssp -GTEEEEECTT-SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred -CcEEEEECCC-CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC
Confidence 5589999964 4555554221 0 0 0112345677765 588999864
No 263
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.48 E-value=7.3 Score=34.68 Aligned_cols=233 Identities=13% Similarity=0.150 Sum_probs=117.8
Q ss_pred EEEeeCCC--CCeeeCCCCCCCCCCCCCceEEEEecc--CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCC---C
Q 017349 94 WQALDPRS--GRWFVLPPMPCPKAVCPQAFACTSLPR--QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPM---L 166 (373)
Q Consensus 94 ~~~~d~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~---~ 166 (373)
+++++... .+|..+.+.. .. .......+.. .+.||+.+... ..-..+++.+....+|+.+... +
T Consensus 33 l~~~~~~~~g~~W~~~~~~~-~~----~~v~~i~~dp~~~~~l~~g~~~g----~~g~gl~~s~D~G~tW~~~~~~~~~~ 103 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVF-LG----HTIHHIVQDPREPERMLMAARTG----HLGPTVFRSDDGGGNWTEATRPPAFN 103 (394)
T ss_dssp EEEEEECTTSCSEEEEEEES-TT----SEEEEEEECSSSTTCEEEEEEC------CCEEEEEESSTTSCCEECSBCCCCC
T ss_pred eEEEECCCCCCCceECCccC-CC----CceEEEEECCCCCCeEEEEecCC----CCCccEEEeCCCCCCceECCccccCC
Confidence 56676554 7898763211 11 1222222222 46788765321 0112578888788899987632 1
Q ss_pred Cc--c-------eeeeeeEe----CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCC---ccc-------------
Q 017349 167 TP--R-------SFFASGNV----NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKL---RMG------------- 217 (373)
Q Consensus 167 ~~--r-------~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~---~~~------------- 217 (373)
.. + ...+++.. .+.||+.+.. ..+++.+-...+|+.+..+ |..
T Consensus 104 ~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~--------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~ 175 (394)
T 3b7f_A 104 KAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP--------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPD 175 (394)
T ss_dssp CCC----CCCCCEEEEEEECCTTSTTCEEEEEET--------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CC
T ss_pred CcccccccccccceeEEEeCCCCCCCEEEEEecC--------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCC
Confidence 11 1 11223332 4677765421 2477777777899987532 210
Q ss_pred -cccccEEEE---CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccC----------CcceEEEEEC----CeEE
Q 017349 218 -LARYDSAVM---GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKE----------GWTGISIVLE----GKLF 279 (373)
Q Consensus 218 -~~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~----------~~~~~~~~~~----~~l~ 279 (373)
...+..++. .+.||+.... ..+++.+....+|+.+...... ......+..+ +.||
T Consensus 176 ~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~ 248 (394)
T 3b7f_A 176 GPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILY 248 (394)
T ss_dssp CCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEE
T ss_pred CCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEE
Confidence 011222222 3567775432 2477787778899887532111 1112223332 5666
Q ss_pred EEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEE---eCCEEEEEeCCce--------eeeeEEEEeecCCcc
Q 017349 280 VISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNG---VEGKIYVVSSGLN--------VAIGRVYEEQNGGIS 348 (373)
Q Consensus 280 v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~GG~~~--------~~~~~~~~~~~d~~~ 348 (373)
+.. . ..+++.+-...+|+.+.. .++.......+.++. -.+.||+...... .....+|. -....
T Consensus 249 vg~-~--~gl~~s~D~G~tW~~~~~-~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~--S~DgG 322 (394)
T 3b7f_A 249 QQN-H--CGIYRMDRREGVWKRIGD-AMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYV--TRDAG 322 (394)
T ss_dssp EEE-T--TEEEEEETTTTEEECGGG-GSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEE--ESSTT
T ss_pred EEc-C--CeEEEeCCCCCcceECCC-CCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEE--ECCCC
Confidence 643 2 368888888889999863 233100012233433 2467888642100 01123443 34445
Q ss_pred cceEEecC
Q 017349 349 AEWKVMTA 356 (373)
Q Consensus 349 ~~W~~~~~ 356 (373)
..|+.+..
T Consensus 323 ~tW~~~~~ 330 (394)
T 3b7f_A 323 ESWQRQDR 330 (394)
T ss_dssp SCCEEECB
T ss_pred CCceECCC
Confidence 78998753
No 264
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.48 E-value=6 Score=33.67 Aligned_cols=128 Identities=9% Similarity=0.028 Sum_probs=65.0
Q ss_pred cceeEEEeCCCCceeccCCCCCcceeeeeeEe-CC-eEEEEcCCCCCCCCcCceEEEEeCCCCeEEe---ccCCcccccc
Q 017349 146 MQSTIMYRATTNQWQLASPMLTPRSFFASGNV-NG-KIMAVGGTGANINETMTAVECYDPESDTWTT---AAKLRMGLAR 220 (373)
Q Consensus 146 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~---~~~~~~~~~~ 220 (373)
...+++||+.+++.+.+..+ .. ..+++.. ++ .||+..... .......+++||...+.... ....+.. ..
T Consensus 168 ~~~v~~~d~~~g~~~~~~~~--~~-p~gl~~spdg~~lyv~~~~~--~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~-~p 241 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMADL--DH-PNGLAFSPDEQTLYVSQTPE--QGHGSVEITAFAWRDGALHDRRHFASVPDG-LP 241 (305)
T ss_dssp CEEEEEECSSSCCCEEEEEE--SS-EEEEEECTTSSEEEEEECCC-----CCCEEEEEEEETTEEEEEEEEECCSSS-CC
T ss_pred CCeEEEEcCCCCcEEEEecC--CC-CcceEEcCCCCEEEEEecCC--cCCCCCEEEEEEecCCCccCCeEEEECCCC-CC
Confidence 45799999988887765411 11 1223332 33 588764321 11113568899887654211 1111111 11
Q ss_pred ccEEE-ECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--C-CeEEEEeeCCCcceEEEeC
Q 017349 221 YDSAV-MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--E-GKLFVISEHGDCPMKQYNP 294 (373)
Q Consensus 221 ~~~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~-~~l~v~gg~~~~~~~~yd~ 294 (373)
...++ -+|+||+..+ ..+.+||++......+..+ ... ..+++ + +.||+... ..+++++.
T Consensus 242 dgi~~d~~G~lwv~~~--------~gv~~~~~~g~~~~~~~~~--~~~--~~~~f~~d~~~L~it~~---~~l~~~~~ 304 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSSG--------TGVCVFDSDGQLLGHIPTP--GTA--SNCTFDQAQQRLFITGG---PCLWMLPL 304 (305)
T ss_dssp CSEEECTTSCEEECCS--------SEEEEECTTSCEEEEEECS--SCC--CEEEECTTSCEEEEEET---TEEEEEEC
T ss_pred CeEEECCCCCEEEecC--------CcEEEECCCCCEEEEEECC--Cce--eEEEEeCCCCEEEEEcC---CeEEEEEC
Confidence 12222 3677877542 3589999976655555432 221 12333 3 45776543 26666654
No 265
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=91.06 E-value=2.8 Score=35.80 Aligned_cols=141 Identities=10% Similarity=0.036 Sum_probs=68.4
Q ss_pred eeEEEeCCCCceeccCCCCCcc-eeeeeeE-eCC-eEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcc----cccc
Q 017349 148 STIMYRATTNQWQLASPMLTPR-SFFASGN-VNG-KIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRM----GLAR 220 (373)
Q Consensus 148 ~~~~yd~~t~~W~~~~~~~~~r-~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~----~~~~ 220 (373)
.+.++|+.+++-...-.++... ....++. -++ .+|+.+..+ ..+.++|+.+++-...-..+. ....
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-------ESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp EEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-------TEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-------CeEEEEECCCCCeEeeEEcCCcccccccc
Confidence 7889998887543322222110 1122332 234 677765432 468999998876432211111 0011
Q ss_pred ccEEEE-CC-EEEEEeCcc--CCCc---cCCceEEEeCCCCceeecccCccCCcceEEEEECCe-EEEEeeCCCcceEEE
Q 017349 221 YDSAVM-GS-KMYVTEGWT--WPFM---FSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGK-LFVISEHGDCPMKQY 292 (373)
Q Consensus 221 ~~~~~~-~~-~lyv~gG~~--~~~~---~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-l~v~gg~~~~~~~~y 292 (373)
...+.. +| .+|+..... .... ....+.+||+.+++....-. ........+..-+++ ||+.+ ..+.+|
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~----~~i~~~ 159 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLG----RDLHVM 159 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEES----SSEEEE
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe-CCCCcceeEECCCCCEEEEeC----CeEEEE
Confidence 223333 45 566653110 0000 12679999998876543211 111112222222454 55552 378888
Q ss_pred eCCCCcee
Q 017349 293 NPDDDTWR 300 (373)
Q Consensus 293 d~~~~~W~ 300 (373)
|..+++-.
T Consensus 160 d~~~~~~~ 167 (337)
T 1pby_B 160 DPEAGTLV 167 (337)
T ss_dssp ETTTTEEE
T ss_pred ECCCCcEe
Confidence 88776543
No 266
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=90.99 E-value=1.2 Score=38.54 Aligned_cols=67 Identities=13% Similarity=0.033 Sum_probs=40.1
Q ss_pred CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE-CC-EEEEEeCccCCCccCCceEEEeCCCCc
Q 017349 178 NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM-GS-KMYVTEGWTWPFMFSPRGGVYDINKDT 255 (373)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~-~lyv~gG~~~~~~~~~~i~~yd~~~~~ 255 (373)
++++|+.++.+ ..+.++|+.+++....-..+........+.. ++ .+|+.+... ..+.+||+.+++
T Consensus 10 ~~~~~v~~~~~-------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~------~~i~~~d~~t~~ 76 (349)
T 1jmx_B 10 GHEYMIVTNYP-------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY------GDIYGIDLDTCK 76 (349)
T ss_dssp TCEEEEEEETT-------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT------TEEEEEETTTTE
T ss_pred CCEEEEEeCCC-------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC------CcEEEEeCCCCc
Confidence 56777776653 4689999998875433222221012223333 45 477776433 579999998876
Q ss_pred ee
Q 017349 256 WN 257 (373)
Q Consensus 256 W~ 257 (373)
-.
T Consensus 77 ~~ 78 (349)
T 1jmx_B 77 NT 78 (349)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 267
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=90.95 E-value=11 Score=36.53 Aligned_cols=151 Identities=6% Similarity=0.027 Sum_probs=73.7
Q ss_pred EEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCC-CCcceeeeeeEe--CC--eEEEEcCCCCCCCCcCceE
Q 017349 124 TSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPM-LTPRSFFASGNV--NG--KIMAVGGTGANINETMTAV 198 (373)
Q Consensus 124 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~~~~ 198 (373)
.....++..++.|+.+ ..+.+||.....-..+... ...+.....+.+ ++ .+++.|+.+ ..+
T Consensus 478 ~~~s~~~~~l~s~s~D-------~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-------~~v 543 (694)
T 3dm0_A 478 VAFSLDNRQIVSASRD-------RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD-------KTV 543 (694)
T ss_dssp EEECTTSSCEEEEETT-------SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT-------SCE
T ss_pred EEEeCCCCEEEEEeCC-------CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC-------CeE
Confidence 3333466666666652 2577788655432222111 111111222222 22 355556554 358
Q ss_pred EEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE-C
Q 017349 199 ECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL-E 275 (373)
Q Consensus 199 ~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~ 275 (373)
.+||..+.+-... +.........+.+ ++++++.|+.+ ..+.+||..+++-...-. . .......+.. +
T Consensus 544 ~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D------g~i~iwd~~~~~~~~~~~-~-~~~v~~~~~sp~ 613 (694)
T 3dm0_A 544 KVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD------GVVLLWDLAEGKKLYSLE-A-NSVIHALCFSPN 613 (694)
T ss_dssp EEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SBCEEEETTTTEEEECCB-C-SSCEEEEEECSS
T ss_pred EEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCceEEEec-C-CCcEEEEEEcCC
Confidence 8899887654322 1111111112222 67788788766 578999998775321111 1 1111111222 4
Q ss_pred CeEEEEeeCCCcceEEEeCCCCcee
Q 017349 276 GKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 276 ~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
+.+++.+. ...+.+||..+++-.
T Consensus 614 ~~~l~~~~--~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 614 RYWLCAAT--EHGIKIWDLESKSIV 636 (694)
T ss_dssp SSEEEEEE--TTEEEEEETTTTEEE
T ss_pred CcEEEEEc--CCCEEEEECCCCCCh
Confidence 44544444 346899998876543
No 268
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=90.74 E-value=12 Score=35.65 Aligned_cols=145 Identities=8% Similarity=0.067 Sum_probs=76.0
Q ss_pred EEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCc-ceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeE
Q 017349 131 KLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTP-RSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTW 208 (373)
Q Consensus 131 ~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 208 (373)
..++.|+.+ ..+.+||..+.+... .+... ..-.+++. -++++++.|+.+ ..+.+||..+++-
T Consensus 161 ~~l~s~s~D-------~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D-------~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 161 FRIISGSDD-------NTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGD-------GTIVLYNGVDGTK 224 (611)
T ss_dssp CEEEEEETT-------SCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCE
T ss_pred eEEEEEeCC-------CeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECC-------CcEEEEECCCCcE
Confidence 356666652 257788876543322 12211 11122222 256777777765 3588899887754
Q ss_pred Ee-ccCCcc---ccc-cc-cEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceeeccc-CccCCcceEEEEECCeEEE
Q 017349 209 TT-AAKLRM---GLA-RY-DSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD-GMKEGWTGISIVLEGKLFV 280 (373)
Q Consensus 209 ~~-~~~~~~---~~~-~~-~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~l~v 280 (373)
.. +..... ... .- +++.. +++.++.|+.+ ..+.+||..+++....-. ..........+..++..++
T Consensus 225 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D------~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 298 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD------KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALV 298 (611)
T ss_dssp EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEE
T ss_pred eeeeccccccccccCCCEEEEEECCCCCEEEEEeCC------CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEE
Confidence 32 211000 111 11 12222 67777777766 578999998876543211 1111111223445666666
Q ss_pred EeeCCCcceEEEeCCCCc
Q 017349 281 ISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 281 ~gg~~~~~~~~yd~~~~~ 298 (373)
.++. ...+..||+.+.+
T Consensus 299 s~s~-d~~i~~~~~~~~~ 315 (611)
T 1nr0_A 299 SISA-NGFINFVNPELGS 315 (611)
T ss_dssp EEET-TCCEEEEETTTTE
T ss_pred EEeC-CCcEEEEeCCCCC
Confidence 6654 5678888887664
No 269
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=90.24 E-value=6.5 Score=31.99 Aligned_cols=140 Identities=17% Similarity=0.219 Sum_probs=76.6
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC---------ceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCC
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN---------QWQLASPMLTPRSFFASGNVNGKIMAVGGTGANI 191 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~---------~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~ 191 (373)
+.+++...++.+|+|-|. .+|+++.... .|..++. .--++...++++|+|-|..
T Consensus 20 ~DAi~~~~~g~~yfFkg~---------~~Wr~~~~~~~~~p~~Is~~wpgLP~-----~IDAA~~~~~~~yfFkG~~--- 82 (219)
T 1hxn_A 20 LSAMVSDNHGATYVFSGS---------HYWRLDTNRDGWHSWPIAHQWPQGPS-----TVDAAFSWEDKLYLIQDTK--- 82 (219)
T ss_dssp CCEEEECTTSCEEEEETT---------EEEESSSSSCTTCCEEGGGTCTTSCS-----SCSEEEEETTEEEEEETTE---
T ss_pred EeEEEECCCCcEEEEeCC---------EEEEEcCCCCCCCceEhhhhccCCCC-----CccEEEEECCcEEEecCCE---
Confidence 444443348899999774 4666664332 2333321 2223333589999997753
Q ss_pred CCcCceEEEEeCCCC-e----E-Eecc---CCccc--cccccEEEE---CCEEEEEeCccCCCccCCceEEEeCCCC---
Q 017349 192 NETMTAVECYDPESD-T----W-TTAA---KLRMG--LARYDSAVM---GSKMYVTEGWTWPFMFSPRGGVYDINKD--- 254 (373)
Q Consensus 192 ~~~~~~~~~yd~~t~-~----W-~~~~---~~~~~--~~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~~yd~~~~--- 254 (373)
.++|+..++ + + +.+. .+|.. ...--+|+. ++++|+|-| +..++||..+.
T Consensus 83 ------yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~d~~~~P~~ 148 (219)
T 1hxn_A 83 ------VYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG--------RRLWWLDLKSGAQA 148 (219)
T ss_dssp ------EEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET--------TEEEEEEGGGGGGC
T ss_pred ------EEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC--------CEEEEEeCCCCceE
Confidence 888886542 1 1 1121 12222 112234432 589999987 45789997653
Q ss_pred ceeecccCccCCcceEEEE------------ECCeEEEEeeCCCcceEEEeCCC
Q 017349 255 TWNLMSDGMKEGWTGISIV------------LEGKLFVISEHGDCPMKQYNPDD 296 (373)
Q Consensus 255 ~W~~~~~~~~~~~~~~~~~------------~~~~l~v~gg~~~~~~~~yd~~~ 296 (373)
.|...+. ++. ...++.. .++.+|.+-|. ..++||..+
T Consensus 149 i~~~~~g-~p~-~vdAa~~~~~~~~~~~~~~~~~~~YFFkg~---~y~r~~~~~ 197 (219)
T 1hxn_A 149 TWTELPW-PHE-KVDGALCMEKPLGPNSCSTSGPNLYLIHGP---NLYCYRHVD 197 (219)
T ss_dssp CCEEECC-SCS-CCSEEEEESSCSSSCCSCSSSCEEEEEETT---EEEEESSHH
T ss_pred hhhcCCC-CCC-CcCEEEEccccccccceeccCCeEEEEECC---EEEEEeCCc
Confidence 2332221 122 2223333 34679999875 788888754
No 270
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=89.79 E-value=6.8 Score=31.55 Aligned_cols=133 Identities=13% Similarity=0.101 Sum_probs=70.2
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEE--ec----cCCccccccccEEEE--CCEEEEEeCccCCCccCC
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWT--TA----AKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSP 244 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~--~~----~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~ 244 (373)
+++...+++|+|-|.. +++++.....+. .+ +.+|.. --++... ++++|+|-|.
T Consensus 28 Ai~~~~g~~y~Fkg~~---------~wr~~~~~~~~~p~~I~~~wp~Lp~~--iDAa~~~~~~~~iyfFkG~-------- 88 (207)
T 1pex_A 28 AITSLRGETMIFKDRF---------FWRLHPQQVDAELFLTKSFWPELPNR--IDAAYEHPSHDLIFIFRGR-------- 88 (207)
T ss_dssp EEEEETTEEEEEETTE---------EEEECSSSSCCEEEEHHHHCTTSCSS--CCEEEEETTTTEEEEEETT--------
T ss_pred EEEeCCCcEEEEECCE---------EEEEeCCCcCCCceehhHhccCCCCC--ccEEEEeccCCcEEEEccC--------
Confidence 4455789999997753 566655443221 11 233321 1122223 5899999773
Q ss_pred ceEEEeCCCCce---eeccc-CccC--CcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceee-----ecC--CCCCC
Q 017349 245 RGGVYDINKDTW---NLMSD-GMKE--GWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRY-----VGG--DKFPC 309 (373)
Q Consensus 245 ~i~~yd~~~~~W---~~~~~-~~~~--~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~-----~~~--~~~~~ 309 (373)
..++|+..+-.- ..+.. .+|. ....+++.. ++++|++-|. ..|+||..+++-.. +.. ..+|
T Consensus 89 ~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~---~ywr~d~~~~~~d~gyPr~i~~~~~Gip- 164 (207)
T 1pex_A 89 KFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN---QVWRYDDTNHIMDKDYPRLIEEDFPGIG- 164 (207)
T ss_dssp EEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT---EEEEEETTTTEECSSCCCBHHHHSTTSC-
T ss_pred EEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC---EEEEEeCcCccccCCCCccHHHcCCCCC-
Confidence 467776432111 11111 1121 122333333 4899999875 88999987653210 000 1122
Q ss_pred cccccceEEEEeCCEEEEEeCC
Q 017349 310 EVMHRPFAVNGVEGKIYVVSSG 331 (373)
Q Consensus 310 ~~~~~~~~~~~~~~~l~i~GG~ 331 (373)
...-+++..++++|++-|.
T Consensus 165 ---~~iDaAf~~~g~~YfFkg~ 183 (207)
T 1pex_A 165 ---DKVDAVYEKNGYIYFFNGP 183 (207)
T ss_dssp ---SCCSEEEEETTEEEEEETT
T ss_pred ---CCccEEEEcCCcEEEEECC
Confidence 2233444579999999885
No 271
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=89.77 E-value=9 Score=32.91 Aligned_cols=201 Identities=7% Similarity=-0.036 Sum_probs=95.2
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCE-EEEEcCccC--------------
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGK-LFVLGGMRS-------------- 140 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~v~GG~~~-------------- 140 (373)
.+..|++...........++.+|..+.+...+...+ . ........+++ |++......
T Consensus 69 Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-------~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (347)
T 2gop_A 69 DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-------N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAW 140 (347)
T ss_dssp TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-------E-EEEEEECTTSSEEEEEEECCCC---------CCCC
T ss_pred CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-------C-ccceeECCCCCEEEEEEccCCCcCCcEEEccccee
Confidence 345566554433234556888898887665553333 1 23333333554 444321100
Q ss_pred -CC----CCCcceeEEEeCCCCce-eccCCCCCcceeeeeeEeCCeEEEEcCCCCCCC-C--c-CceEEEEeCCCCeEEe
Q 017349 141 -DT----ETPMQSTIMYRATTNQW-QLASPMLTPRSFFASGNVNGKIMAVGGTGANIN-E--T-MTAVECYDPESDTWTT 210 (373)
Q Consensus 141 -~~----~~~~~~~~~yd~~t~~W-~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~-~--~-~~~~~~yd~~t~~W~~ 210 (373)
++ ......++++|..+++. +.+.. + .........+.+++.+..+ .. . . ...++.+| +++++.
T Consensus 141 ~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~~~~--~~~~~~~~~~~l~~~d--~~~~~~ 212 (347)
T 2gop_A 141 FDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNVPHR--EIIPQYFKFWDIYIWE--DGKEEK 212 (347)
T ss_dssp ---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEEECC--CSSCCSSCCEEEEEEE--TTEEEE
T ss_pred ecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEEecc--cccccccccccEEEeC--CCceEE
Confidence 00 01135789999998876 55543 2 2222233322255544332 11 1 2 45788888 777766
Q ss_pred ccCCccccccccEEEECCE-EEEEeCccC-CCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCC-Cc
Q 017349 211 AAKLRMGLARYDSAVMGSK-MYVTEGWTW-PFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHG-DC 287 (373)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~-lyv~gG~~~-~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~-~~ 287 (373)
+..- .......-+|+ |++.+.... .......++.+| +++++.+............+..++ +|+.+..+ ..
T Consensus 213 l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg-~~~~~~~~~~~ 285 (347)
T 2gop_A 213 MFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGK-VYFTLFEEGSV 285 (347)
T ss_dssp EEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTE-EEEEEEETTEE
T ss_pred eccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCc-EEEEEecCCcE
Confidence 6432 11122244665 444432221 111235788899 666665543111111111222244 76665543 34
Q ss_pred ceEEEeCCCCceeee
Q 017349 288 PMKQYNPDDDTWRYV 302 (373)
Q Consensus 288 ~~~~yd~~~~~W~~~ 302 (373)
.++ ++ +++...+
T Consensus 286 ~l~-~~--~g~~~~~ 297 (347)
T 2gop_A 286 NLY-IW--DGEIKPI 297 (347)
T ss_dssp EEE-EE--SSSEEEE
T ss_pred EEE-Ec--CCceEEE
Confidence 566 66 3444444
No 272
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=89.62 E-value=10 Score=33.40 Aligned_cols=191 Identities=12% Similarity=0.057 Sum_probs=94.5
Q ss_pred ceeEEEeeCCC--CCeeeCCCCCC-CCCCCCCceEEEEecc-CC--EEEEEcCccCCCCCCcceeEEEeCCCCceeccCC
Q 017349 91 RIQWQALDPRS--GRWFVLPPMPC-PKAVCPQAFACTSLPR-QG--KLFVLGGMRSDTETPMQSTIMYRATTNQWQLASP 164 (373)
Q Consensus 91 ~~~~~~~d~~~--~~W~~~~~~~~-~~~~~~~~~~~~~~~~-~~--~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~ 164 (373)
...+++||+.+ .+-..+..... ......+-||..+... ++ +||++.... ......++.+|+.++....+..
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~---~~s~ielf~~d~~~~~~~~~~~ 158 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG---SSSTVEVFKFQEEEKSLLHLKT 158 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST---TCCEEEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC---CCCeEEEEEEECCCCEEEEEec
Confidence 45688999873 34444432210 1101124566665431 23 688885431 1234467778887776555433
Q ss_pred C---CCcceeeeeeEeCCeEEEEcCCCCCC----------CCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CC-
Q 017349 165 M---LTPRSFFASGNVNGKIMAVGGTGANI----------NETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GS- 228 (373)
Q Consensus 165 ~---~~~r~~~~~~~~~~~iyv~GG~~~~~----------~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~- 228 (373)
. +..+.+-..+.-++.+|+-+-..... ......+++||+. +.+.+. .....+..... ++
T Consensus 159 ~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~---~~l~~pNGia~spDg~ 233 (355)
T 3sre_A 159 IRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVA---EGFDFANGINISPDGK 233 (355)
T ss_dssp ECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEE---EEESSEEEEEECTTSS
T ss_pred cccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEee---cCCcccCcceECCCCC
Confidence 2 23344445555678888753211000 1234578889884 333321 11122223333 44
Q ss_pred EEEEEeCccCCCccCCceEEEeCCC-Cceeeccc-CccCCcceEEEEE-CCeEEEEeeCCCcceEEEeCC
Q 017349 229 KMYVTEGWTWPFMFSPRGGVYDINK-DTWNLMSD-GMKEGWTGISIVL-EGKLFVISEHGDCPMKQYNPD 295 (373)
Q Consensus 229 ~lyv~gG~~~~~~~~~~i~~yd~~~-~~W~~~~~-~~~~~~~~~~~~~-~~~l~v~gg~~~~~~~~yd~~ 295 (373)
.+|+.-... ..+++||... ++...... ..+..-.+.++-- +|+||+....+...+.+||++
T Consensus 234 ~lYvadt~~------~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 234 YVYIAELLA------HKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEEEGGG------TEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEEEEeCCC------CeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 688775332 6799999864 33322111 1111112222334 489999654333455566665
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=89.58 E-value=12 Score=34.00 Aligned_cols=223 Identities=11% Similarity=0.074 Sum_probs=111.9
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++.||+.-.. ..++++|+.++....+.... ..-.+.++.. ++.||+...... .....++.++...
T Consensus 152 ~g~Lyv~D~~-----~~I~~id~~~g~v~~~~~~~------~~P~giavd~-dG~lyVad~~~~---~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 152 YDDLYWVGQR-----DAFRHVDFVNQYVDIKTTNI------GQCADVNFTL-NGDMVVVDDQSS---DTNTGIYLFTRAS 216 (433)
T ss_dssp TCEEEEECBT-----SCEEEEETTTTEEEEECCCC------SCEEEEEECT-TCCEEEEECCSC---TTSEEEEEECGGG
T ss_pred CCEEEEEeCC-----CCEEEEECCCCEEEEeecCC------CCccEEEECC-CCCEEEEcCCCC---cccceEEEEECCC
Confidence 3678876322 66899999888877764421 1234444444 555998854211 1123466666543
Q ss_pred CceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCeE-EeccCCccccccccEEEE-CC-EEE
Q 017349 157 NQWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDTW-TTAAKLRMGLARYDSAVM-GS-KMY 231 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~-~~-~ly 231 (373)
. +.....++.......+++. ++.||+.-.. ...+++||+.+..- +.+............++. ++ .||
T Consensus 217 ~-~~~~~~~~~~~~P~giavd~~~G~lyv~d~~-------~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LY 288 (433)
T 4hw6_A 217 G-FTERLSLCNARGAKTCAVHPQNGKIYYTRYH-------HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAY 288 (433)
T ss_dssp T-TCCEEEEEECSSBCCCEECTTTCCEEECBTT-------CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEE
T ss_pred C-eeccccccccCCCCEEEEeCCCCeEEEEECC-------CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEE
Confidence 2 2211111111112233332 5788876432 24699999987654 222111111111123332 44 488
Q ss_pred EEeCccCCCccCCceEEEeCC--CCceee---c-ccCc----c------CCc-ceEE-EE----------ECCeEEEEee
Q 017349 232 VTEGWTWPFMFSPRGGVYDIN--KDTWNL---M-SDGM----K------EGW-TGIS-IV----------LEGKLFVISE 283 (373)
Q Consensus 232 v~gG~~~~~~~~~~i~~yd~~--~~~W~~---~-~~~~----~------~~~-~~~~-~~----------~~~~l~v~gg 283 (373)
+.--.. +.|.++|.. ++.... + ...- . ... .... ++ -++.||+...
T Consensus 289 vad~~~------~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~ 362 (433)
T 4hw6_A 289 IIYNGK------HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR 362 (433)
T ss_dssp EEETTT------TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET
T ss_pred EEeCCC------CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC
Confidence 875432 578887654 333221 1 1000 0 001 1112 22 3567998864
Q ss_pred CCCcceEEEeCCCCceeeecCCCC-----------C-CcccccceEEEEe--CCEEEEEeC
Q 017349 284 HGDCPMKQYNPDDDTWRYVGGDKF-----------P-CEVMHRPFAVNGV--EGKIYVVSS 330 (373)
Q Consensus 284 ~~~~~~~~yd~~~~~W~~~~~~~~-----------~-~~~~~~~~~~~~~--~~~l~i~GG 330 (373)
. ...|.++++. +....+...+. + ........+++.. ++.|||.--
T Consensus 363 ~-n~~I~~~~~~-G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 363 D-SHTVRVLTPE-GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp T-TTEEEEECTT-SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred C-CCEEEEECCC-CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 3 6689999974 45555442211 0 0123446777766 789999864
No 274
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=89.46 E-value=17 Score=35.55 Aligned_cols=240 Identities=8% Similarity=-0.076 Sum_probs=117.5
Q ss_pred CCEEEEEEecCCCCceeEEEeeCC---CCCeeeCCCCCC-CCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEE
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPR---SGRWFVLPPMPC-PKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMY 152 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~---~~~W~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~y 152 (373)
+.++|++..........+++.+.. ...+..+-.... .. ..........++.+++.++++.... + .....++++
T Consensus 118 G~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~-~~~~~~~~~~~SPDG~~la~~~~~~-G-~e~~~i~v~ 194 (741)
T 1yr2_A 118 GASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAK-DGATALDAWAASDDGRLLAYSVQDG-G-SDWRTVKFV 194 (741)
T ss_dssp TTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC-----EEEEEEEECTTSSEEEEEEEET-T-CSEEEEEEE
T ss_pred CCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhcc-CCCEEEEeEEECCCCCEEEEEEcCC-C-CceEEEEEE
Confidence 667777665444444567777766 566766532220 00 0001234445555666555543321 1 123479999
Q ss_pred eCCCCceeccCCCCCccee-eeeeEe-CCeEEEEcCCCCC-------CCCcCceEEEEeCCCCeE--EeccCCcc-cccc
Q 017349 153 RATTNQWQLASPMLTPRSF-FASGNV-NGKIMAVGGTGAN-------INETMTAVECYDPESDTW--TTAAKLRM-GLAR 220 (373)
Q Consensus 153 d~~t~~W~~~~~~~~~r~~-~~~~~~-~~~iyv~GG~~~~-------~~~~~~~~~~yd~~t~~W--~~~~~~~~-~~~~ 220 (373)
|..+++..... . .... ...+.. +..|+. +..+.. .......+++++..++.- +.+-..+. +...
T Consensus 195 dl~tg~~~~~~-~--~~~~~~~~~wspD~~l~~-~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 195 GVADGKPLADE-L--KWVKFSGLAWLGNDALLY-SRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp ETTTCCEEEEE-E--EEEESCCCEESTTSEEEE-EECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred ECCCCCCCCcc-C--CCceeccEEEECCCEEEE-EEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 99999875431 1 1111 122222 333433 332200 011244678888776542 12211111 1111
Q ss_pred ccEEE-ECCEEEEEeCccCCCccCCceEEEeCCCC--c-eeecccCccCCcceEEEEECCeEEEEeeCC--CcceEEEeC
Q 017349 221 YDSAV-MGSKMYVTEGWTWPFMFSPRGGVYDINKD--T-WNLMSDGMKEGWTGISIVLEGKLFVISEHG--DCPMKQYNP 294 (373)
Q Consensus 221 ~~~~~-~~~~lyv~gG~~~~~~~~~~i~~yd~~~~--~-W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~--~~~~~~yd~ 294 (373)
..... -+|+..++...... ...+.++.+|..++ . |+.+..... ........-++.||+....+ ...++++|.
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~-~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGT-DPVNTVHVARVTNGKIGPVTALIPDLK-AQWDFVDGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEEEECTTSCEEEEEEECTT-CSCCEEEEEEEETTEECCCEEEECSSS-SCEEEEEEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEccC-CCcceEEEEECCCCCCcccEEecCCCC-ceEEEEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 22222 26654444332211 12468999999887 6 877754222 22222234577788776432 457999998
Q ss_pred CC--CceeeecCCCCCCcccccceEEEEeCCEEEEEeC
Q 017349 295 DD--DTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 295 ~~--~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
++ ..|+.+.. .. .. ....+...+++|++...
T Consensus 349 ~~~~~~~~~l~~--~~-~~--~l~~~~~~~~~lv~~~~ 381 (741)
T 1yr2_A 349 SGSTPRFDTVVP--ES-KD--NLESVGIAGNRLFASYI 381 (741)
T ss_dssp SSSSCEEEEEEC--CC-SS--EEEEEEEEBTEEEEEEE
T ss_pred CCCccccEEEec--CC-CC--eEEEEEEECCEEEEEEE
Confidence 87 57888752 22 11 11233344777776654
No 275
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=89.28 E-value=10 Score=32.89 Aligned_cols=54 Identities=13% Similarity=0.200 Sum_probs=34.8
Q ss_pred ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEE-eCCEEEEEeCCc
Q 017349 274 LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNG-VEGKIYVVSSGL 332 (373)
Q Consensus 274 ~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~l~i~GG~~ 332 (373)
-+|+||+.... ...|.+||+++++...+...+ ......+++. -+++|||.....
T Consensus 257 ~~G~l~va~~~-~~~V~~~d~~~G~~~~~~~~~----~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 257 KDHNIYVGDLA-HSAIGVITSADRAYKLLVTDE----KLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp TTCCEEEEEGG-GTEEEEEETTTTEEEEEEECG----GGSCEEEEEECTTSCEEEEECCG
T ss_pred CCCCEEEEccC-CCeEEEEECCCCCEEEEEECC----ceecCCeeEECCCCcEEEEeCcc
Confidence 46889987643 568999999666676665322 1123345544 468899998754
No 276
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=89.23 E-value=13 Score=33.97 Aligned_cols=218 Identities=11% Similarity=-0.007 Sum_probs=101.9
Q ss_pred ccCCCCEEEEEEecC---CCCceeEEEeeCCC--CCe---eeCCCCCCCCCCCCCceEE--E-E------e--ccCCEEE
Q 017349 73 LSLSLPYLFIFSFHK---PTARIQWQALDPRS--GRW---FVLPPMPCPKAVCPQAFAC--T-S------L--PRQGKLF 133 (373)
Q Consensus 73 ~~~~~~~l~~~gg~~---~~~~~~~~~~d~~~--~~W---~~~~~~~~~~~~~~~~~~~--~-~------~--~~~~~i~ 133 (373)
.+..+..+|+..... ......+...|... .+. ...-+||... .-.|+++- + + . ..++++|
T Consensus 21 ~~~~e~~~y~~~~~~~~~~~~~d~la~vDvdp~s~ty~~vi~~~~~p~~g-de~HH~gwn~css~~~~~~~~~~~r~~l~ 99 (462)
T 2ece_A 21 KAPPEDLAYVACLYTGTGINRADFIAVVDVNPKSETYSKIVHKVELPYIN-DELHHFGWNACSSALCPNGKPNIERRFLI 99 (462)
T ss_dssp TSCCCSEEEEEEECTTTTCCCCCEEEEEECCTTSTTTTSEEEEEECSSSC-CCBCCCEESCCGGGGSTTCCTTCCSCEEE
T ss_pred cCCcceEEEEEeeccCCCCCCCCeEEEEECCCCCCCcceEEEEEECCCCC-CcccccchhhhhhhcccccCCCccCCEEE
Confidence 356688999988753 22344566676554 333 2222344211 11233332 0 0 0 1156677
Q ss_pred EEcCccCCCCCCcceeEEEeCCCCc----eeccC---CC--CCcc-eeeeeeE-eCCeEEEEc-CCCCCCCCcCceEEEE
Q 017349 134 VLGGMRSDTETPMQSTIMYRATTNQ----WQLAS---PM--LTPR-SFFASGN-VNGKIMAVG-GTGANINETMTAVECY 201 (373)
Q Consensus 134 v~GG~~~~~~~~~~~~~~yd~~t~~----W~~~~---~~--~~~r-~~~~~~~-~~~~iyv~G-G~~~~~~~~~~~~~~y 201 (373)
+-|.. .+.++++|..++. -.+.- .+ .... ..|.+.. -++ ||+-. |.. .......+.++
T Consensus 100 v~~l~-------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~--~g~~~g~v~vl 169 (462)
T 2ece_A 100 VPGLR-------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNE--EGEGPGGILML 169 (462)
T ss_dssp EEBTT-------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEET--TSCSCCEEEEE
T ss_pred EccCC-------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCc--CCCCCCeEEEE
Confidence 66553 3589999998772 22111 01 0111 2233333 345 77631 211 22335789999
Q ss_pred eCCCCeEEe-cc--CCccccccccEEEE-CCEEEEEeC----------ccCCC---ccCCceEEEeCCCCceeeccc-Cc
Q 017349 202 DPESDTWTT-AA--KLRMGLARYDSAVM-GSKMYVTEG----------WTWPF---MFSPRGGVYDINKDTWNLMSD-GM 263 (373)
Q Consensus 202 d~~t~~W~~-~~--~~~~~~~~~~~~~~-~~~lyv~gG----------~~~~~---~~~~~i~~yd~~~~~W~~~~~-~~ 263 (373)
|.+|.+-.. ++ ..+. ...+..... ++++++... ..... ...+.+.+||..+++ .+.. ..
T Consensus 170 D~~T~~v~~~~~~~~~~~-~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--~~~tI~v 246 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQ-YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--RIHSLTL 246 (462)
T ss_dssp CTTTCCEEEECCSBCTTC-CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--EEEEEES
T ss_pred ECCCCeEEEEEccCCCCc-cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--EeeEEec
Confidence 999875322 21 1111 111112222 444444432 11111 345789999998763 2222 12
Q ss_pred cCCcceEE-EEE-----CCeEEEEeeC----CCcceEEEeCCCCceeeecC
Q 017349 264 KEGWTGIS-IVL-----EGKLFVISEH----GDCPMKQYNPDDDTWRYVGG 304 (373)
Q Consensus 264 ~~~~~~~~-~~~-----~~~l~v~gg~----~~~~~~~yd~~~~~W~~~~~ 304 (373)
........ +.+ +..+|+.... ....+++|..+.++|+.+..
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~v 297 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKV 297 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEE
Confidence 11111111 222 3456766540 25566665555577876653
No 277
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=89.22 E-value=13 Score=33.81 Aligned_cols=119 Identities=12% Similarity=-0.014 Sum_probs=64.9
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCC--CCCCcceeEEEe
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSD--TETPMQSTIMYR 153 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~--~~~~~~~~~~yd 153 (373)
....+|+...........+.++|+.+++-.. .++... .. +.+....++.+|+.--.... .....+.+.++|
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~--~I~vG~----~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILG--MTDGGF----LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEE--EEEECS----SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEE--EEECCC----CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEE
Confidence 3567888764321111689999999886543 333222 22 55555546678887421000 001245799999
Q ss_pred CCCCceec-cCCCC-Cc-----ceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeE
Q 017349 154 ATTNQWQL-ASPML-TP-----RSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTW 208 (373)
Q Consensus 154 ~~t~~W~~-~~~~~-~~-----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 208 (373)
+.+++-.. ++ ++ .. ...+.+++ -+.++|+..-. ..+.+.++|..+++=
T Consensus 156 ~~t~~vv~~I~-v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~------~~~~VsVID~~t~kv 212 (426)
T 3c75_H 156 PVTFLPIADIE-LPDAPRFLVGTYQWMNALTPDNKNLLFYQFS------PAPAVGVVDLEGKTF 212 (426)
T ss_dssp TTTCCEEEEEE-ETTCCCCCBSCCGGGSEECTTSSEEEEEECS------SSCEEEEEETTTTEE
T ss_pred CCCCcEEEEEE-CCCccccccCCCcceEEEcCCCCEEEEEecC------CCCeEEEEECCCCeE
Confidence 99986432 21 11 11 11223333 35578876321 135688999998864
No 278
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=89.22 E-value=16 Score=34.99 Aligned_cols=181 Identities=14% Similarity=0.120 Sum_probs=100.8
Q ss_pred CceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCc
Q 017349 119 QAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN--VNGKIMAVGGTGANINETMT 196 (373)
Q Consensus 119 ~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~ 196 (373)
...+.+....++.||+.-- ....++++++.....+.+-.-... ...++++ .++.||+.-.. ..
T Consensus 350 ~~~~ld~d~~~~~ly~sD~-------~~~~I~r~~~~g~~~~~v~~~~~~-~p~GlAvD~~~~~lY~tD~~-------~~ 414 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDD-------EVRAIRRSFIDGSGSQFVVTAQIA-HPDGIAVDWVARNLYWTDTG-------TD 414 (619)
T ss_dssp SEEEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTTEEEEEETT-------TT
T ss_pred ccEEEEEEcCCCeEEEEeC-------CCCeEEEEEcCCCccEEEEECCCC-CcCceEEecccCcEEEEeCC-------CC
Confidence 3455555555799999742 244789999887665554322111 1224444 47899997432 34
Q ss_pred eEEEEeCCCCeEEecc--CCccccccccEEEE--CCEEEEEe-CccCCCccCCceEEEeCCCCceeecccCccCCcc-eE
Q 017349 197 AVECYDPESDTWTTAA--KLRMGLARYDSAVM--GSKMYVTE-GWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWT-GI 270 (373)
Q Consensus 197 ~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~--~~~lyv~g-G~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~ 270 (373)
.+++.++....-+.+. .+..| .+.++. +|.||+.- |. ...|++.++.-..=+.+.. -...+- +.
T Consensus 415 ~I~v~~~~G~~~~~l~~~~l~~P---~~iavdp~~G~ly~tD~g~------~~~I~r~~~dG~~~~~l~~-~~l~~P~Gl 484 (619)
T 3s94_A 415 RIEVTRLNGTMRKILISEDLEEP---RAIVLDPMVGYMYWTDWGE------IPKIERAALDGSDRVVLVN-TSLGWPNGL 484 (619)
T ss_dssp EEEEEETTSCSCEEEECTTCCSE---EEEEEETTTTEEEEEECSS------SCEEEEEETTSCSCEEEEC-SSCSCEEEE
T ss_pred cEEEEeCCCCeEEEEEECCCCCe---eeEEEEcCCCcEEEecCCC------CCEEEEEccCCCccEEEEe-CCCCCCeee
Confidence 6888888765433332 22222 123343 58999874 22 2568888775332222211 011111 22
Q ss_pred EEE-ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEEEEEeC
Q 017349 271 SIV-LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 271 ~~~-~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
++- .+++||+.... ...|+++|++...=+.+....+ ...++++..++.||+.--
T Consensus 485 alD~~~~~LY~aD~~-~~~I~~~~~dG~~~~~~~~~~l-----~~P~glav~~~~ly~tD~ 539 (619)
T 3s94_A 485 ALDYDEGKIYWGDAK-TDKIEVMNTDGTGRRVLVEDKI-----PHIFGFTLLGDYVYWTDW 539 (619)
T ss_dssp EEETTTTEEEEEETT-TTEEEEEESSSCCCEEEEECCC-----CSSCCEEEETTEEEEECT
T ss_pred EEcccCCEEEEEECC-CCEEEEEecCCCceEEEeccCC-----CCcEEEEEECCEEEEeec
Confidence 222 26899998643 5689999986543333321111 234778888899998864
No 279
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=89.07 E-value=10 Score=32.68 Aligned_cols=149 Identities=9% Similarity=0.097 Sum_probs=69.8
Q ss_pred EEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEe
Q 017349 124 TSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYD 202 (373)
Q Consensus 124 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd 202 (373)
..+..++.+++.|+.+ ..+.+||..+++....-.- ....-.+++. -+++.++.||.+ ..+.+||
T Consensus 82 ~~~~~~~~~l~s~s~D-------~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~s~~~d-------~~i~~wd 146 (343)
T 2xzm_R 82 LALSQENCFAISSSWD-------KTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNRQILSAGAE-------REIKLWN 146 (343)
T ss_dssp EEECSSTTEEEEEETT-------SEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTTEEEEEETT-------SCEEEEE
T ss_pred EEECCCCCEEEEEcCC-------CcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCCEEEEEcCC-------CEEEEEe
Confidence 3344466666777652 2688999887753221100 1111112222 245666666654 3577888
Q ss_pred CCCCeEEeccCCccccccccEEEE--C----------CEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceE
Q 017349 203 PESDTWTTAAKLRMGLARYDSAVM--G----------SKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGI 270 (373)
Q Consensus 203 ~~t~~W~~~~~~~~~~~~~~~~~~--~----------~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~ 270 (373)
.....-...............+.. + +.+++.|+.+ ..+.+||.....-..+.. ........
T Consensus 147 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~-h~~~v~~~ 219 (343)
T 2xzm_R 147 ILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD------GRLKVWNTNFQIRYTFKA-HESNVNHL 219 (343)
T ss_dssp SSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT------SEEEEEETTTEEEEEEEC-CSSCEEEE
T ss_pred ccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC------CEEEEEcCCCceeEEEcC-ccccceEE
Confidence 764433222211111111111111 1 1455666655 568888843221111111 11111111
Q ss_pred EEEECCeEEEEeeCCCcceEEEeCC
Q 017349 271 SIVLEGKLFVISEHGDCPMKQYNPD 295 (373)
Q Consensus 271 ~~~~~~~l~v~gg~~~~~~~~yd~~ 295 (373)
+..-+++.++.|+. ...+..||..
T Consensus 220 ~~s~~g~~l~sgs~-dg~v~iwd~~ 243 (343)
T 2xzm_R 220 SISPNGKYIATGGK-DKKLLIWDIL 243 (343)
T ss_dssp EECTTSSEEEEEET-TCEEEEEESS
T ss_pred EECCCCCEEEEEcC-CCeEEEEECC
Confidence 12226777777765 5678899984
No 280
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=88.93 E-value=10 Score=32.39 Aligned_cols=173 Identities=5% Similarity=0.038 Sum_probs=81.3
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCccee
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSF 171 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~ 171 (373)
..+.++|..+++-... +... .....+..+..++.+++.|+.++ .+.+||.....-..+..- ....
T Consensus 87 ~~v~~wd~~~~~~~~~--~~~h----~~~v~~~~~~~~~~~l~s~s~D~-------~i~vwd~~~~~~~~~~~h--~~~v 151 (319)
T 3frx_A 87 KTLRLWDVATGETYQR--FVGH----KSDVMSVDIDKKASMIISGSRDK-------TIKVWTIKGQCLATLLGH--NDWV 151 (319)
T ss_dssp SEEEEEETTTTEEEEE--EECC----SSCEEEEEECTTSCEEEEEETTS-------CEEEEETTSCEEEEECCC--SSCE
T ss_pred CEEEEEECCCCCeeEE--EccC----CCcEEEEEEcCCCCEEEEEeCCC-------eEEEEECCCCeEEEEecc--CCcE
Confidence 3477888877653221 1100 02233333444677777777522 577888765432222111 1111
Q ss_pred eeeeEe-------CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCcc
Q 017349 172 FASGNV-------NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMF 242 (373)
Q Consensus 172 ~~~~~~-------~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~ 242 (373)
..+... ++..++.|+.+ ..+.+||..+.+-... +......-..+.+ ++++++.|+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d-------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~d----- 217 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGND-------KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKD----- 217 (319)
T ss_dssp EEEEECCC------CCEEEEEETT-------SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETT-----
T ss_pred EEEEEccCCCCCCCccEEEEEeCC-------CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCC-----
Confidence 111111 23355556554 3578888877653221 1111111112222 67777777766
Q ss_pred CCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCC
Q 017349 243 SPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 243 ~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
..+.+||..+.+=...-. ........+..-++.+++.+... .+.+|+.+..
T Consensus 218 -g~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~la~~~~~--~i~v~~~~~~ 268 (319)
T 3frx_A 218 -GEIMLWNLAAKKAMYTLS-AQDEVFSLAFSPNRYWLAAATAT--GIKVFSLDPQ 268 (319)
T ss_dssp -CEEEEEETTTTEEEEEEE-CCSCEEEEEECSSSSEEEEEETT--EEEEEEETTE
T ss_pred -CeEEEEECCCCcEEEEec-CCCcEEEEEEcCCCCEEEEEcCC--CcEEEEeCcC
Confidence 578999998765211111 11111111122255555555433 5666766543
No 281
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=88.52 E-value=8.9 Score=31.19 Aligned_cols=128 Identities=13% Similarity=0.144 Sum_probs=66.9
Q ss_pred eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeE--Eec----cCCccccccccEEEECCEEEEEeCccCCCccCCceEEEe
Q 017349 177 VNGKIMAVGGTGANINETMTAVECYDPESDTW--TTA----AKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYD 250 (373)
Q Consensus 177 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W--~~~----~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd 250 (373)
.++++|+|-|.. .++++...... ..+ +.+|.. --++...++++|+|-| +..++|+
T Consensus 27 ~~g~~yfFkg~~---------~Wr~~~~~~~~~p~~Is~~wpgLP~~--IDAA~~~~~~~yfFkG--------~~yw~~~ 87 (219)
T 1hxn_A 27 NHGATYVFSGSH---------YWRLDTNRDGWHSWPIAHQWPQGPST--VDAAFSWEDKLYLIQD--------TKVYVFL 87 (219)
T ss_dssp TTSCEEEEETTE---------EEESSSSSCTTCCEEGGGTCTTSCSS--CSEEEEETTEEEEEET--------TEEEEEE
T ss_pred CCCcEEEEeCCE---------EEEEcCCCCCCCceEhhhhccCCCCC--ccEEEEECCcEEEecC--------CEEEEEe
Confidence 478899997753 45554332211 111 123321 2234445899999977 4588888
Q ss_pred CCCC-ce-----eeccc--CccCC----cceEEEEE--CCeEEEEeeCCCcceEEEeCCCC---ceeeecCCCCCCcccc
Q 017349 251 INKD-TW-----NLMSD--GMKEG----WTGISIVL--EGKLFVISEHGDCPMKQYNPDDD---TWRYVGGDKFPCEVMH 313 (373)
Q Consensus 251 ~~~~-~W-----~~~~~--~~~~~----~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~---~W~~~~~~~~~~~~~~ 313 (373)
..++ += +.+.. .++.. ...++... ++++|++-|. ..|+||..+. .|...+.+ | . .
T Consensus 88 ~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~---~ywr~d~~~~P~~i~~~~~g~--p-~--~ 159 (219)
T 1hxn_A 88 TKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR---RLWWLDLKSGAQATWTELPWP--H-E--K 159 (219)
T ss_dssp CSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT---EEEEEEGGGGGGCCCEEECCS--C-S--C
T ss_pred CCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC---EEEEEeCCCCceEhhhcCCCC--C-C--C
Confidence 6532 10 01110 12222 12333332 6899999876 7899997542 34443322 2 0 2
Q ss_pred cceEEEE-----------eCCEEEEEeCC
Q 017349 314 RPFAVNG-----------VEGKIYVVSSG 331 (373)
Q Consensus 314 ~~~~~~~-----------~~~~l~i~GG~ 331 (373)
..+++.. .++.+|++-|.
T Consensus 160 vdAa~~~~~~~~~~~~~~~~~~~YFFkg~ 188 (219)
T 1hxn_A 160 VDGALCMEKPLGPNSCSTSGPNLYLIHGP 188 (219)
T ss_dssp CSEEEEESSCSSSCCSCSSSCEEEEEETT
T ss_pred cCEEEEccccccccceeccCCeEEEEECC
Confidence 2233331 35679999885
No 282
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=88.38 E-value=11 Score=31.95 Aligned_cols=113 Identities=15% Similarity=0.194 Sum_probs=58.7
Q ss_pred EEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC--ceeccCCCCCccee-eeeeEe---CCeEEEEcCCCCCCCCcCc
Q 017349 123 CTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN--QWQLASPMLTPRSF-FASGNV---NGKIMAVGGTGANINETMT 196 (373)
Q Consensus 123 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~ 196 (373)
+..+..++.+++.|+.+ ..+.+||..++ .++.+..+...... ..+... ++.+++.|+.+ .
T Consensus 16 ~~~~~~~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-------g 81 (351)
T 3f3f_A 16 DVVYDFYGRHVATCSSD-------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-------K 81 (351)
T ss_dssp EEEECSSSSEEEEEETT-------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-------S
T ss_pred EEEEcCCCCEEEEeeCC-------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-------C
Confidence 33444466667776652 25777777654 34333322212222 222322 36677777765 3
Q ss_pred eEEEEeCCCC-------eEEeccCCccccccccEEEE--C--CEEEEEeCccCCCccCCceEEEeCCCCc
Q 017349 197 AVECYDPESD-------TWTTAAKLRMGLARYDSAVM--G--SKMYVTEGWTWPFMFSPRGGVYDINKDT 255 (373)
Q Consensus 197 ~~~~yd~~t~-------~W~~~~~~~~~~~~~~~~~~--~--~~lyv~gG~~~~~~~~~~i~~yd~~~~~ 255 (373)
.+.+||..++ .|+.+..+.........+.. + +.+++.|+.+ ..+.+||+.+.+
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d------g~v~iwd~~~~~ 145 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND------GILRLYDALEPS 145 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT------CEEEEEECSSTT
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC------CcEEEecCCChH
Confidence 5778887764 23433332222222222222 3 6677777665 578999987664
No 283
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=87.87 E-value=5.9 Score=40.58 Aligned_cols=100 Identities=9% Similarity=-0.050 Sum_probs=56.2
Q ss_pred ceEE-EEeCCCCeEEeccCCccccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEE
Q 017349 196 TAVE-CYDPESDTWTTAAKLRMGLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIV 273 (373)
Q Consensus 196 ~~~~-~yd~~t~~W~~~~~~~~~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~ 273 (373)
..++ +||..++.-+.+. .........+.. +|+.++++... ..+.++|+.+++-..+...........+..
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~SpDG~~la~~~~~------~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDRNGKFAVVANDR------FEIMTVDLETGKPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--CCCCSEEEEEECTTSSEEEEEETT------SEEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred CceEEEEECCCCCceEec--CCccceeeeEECCCCCEEEEECCC------CeEEEEECCCCceEEeccCCCCCccceEEC
Confidence 4678 8898887766554 111111122222 66666666543 479999999887665532121111222223
Q ss_pred ECCeEEEEeeCC---------CcceEEEeCCCCceeeec
Q 017349 274 LEGKLFVISEHG---------DCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 274 ~~~~l~v~gg~~---------~~~~~~yd~~~~~W~~~~ 303 (373)
-+|+.+++++.. ...+++||..+++...+.
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 366655554432 258999999887754443
No 284
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=87.84 E-value=20 Score=34.52 Aligned_cols=62 Identities=8% Similarity=-0.174 Sum_probs=32.5
Q ss_pred ceEEEEeCCCCeE-EeccCCccc---ccccc-EE-EECCEEEEEeCccCCCccCCceEEEeCCCCceeec
Q 017349 196 TAVECYDPESDTW-TTAAKLRMG---LARYD-SA-VMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLM 259 (373)
Q Consensus 196 ~~~~~yd~~t~~W-~~~~~~~~~---~~~~~-~~-~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~ 259 (373)
..++++|..+++- +.+...... ..... .+ .-+|+++++.... ......++.+|+.+++...+
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~--~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNR--AQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEET--TSCEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcC--CCCeEEEEEEeCCCCcceEE
Confidence 3788899888763 444321110 11111 11 2277766554322 11224688999988876543
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=87.41 E-value=5.8 Score=37.72 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=46.9
Q ss_pred cEEEECCEEEEEeCccCCCccCCceEEEeCCCCc--eeecccCccCC------cceEEEEECCeEEEEeeCCCcceEEEe
Q 017349 222 DSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSDGMKEG------WTGISIVLEGKLFVISEHGDCPMKQYN 293 (373)
Q Consensus 222 ~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~~~~~~------~~~~~~~~~~~l~v~gg~~~~~~~~yd 293 (373)
+.++.+++||+..... .++++|.++++ |+.-....... .....++.+++||+... ...+..+|
T Consensus 63 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--dg~l~AlD 133 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS-------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--DASVVALN 133 (582)
T ss_dssp CCEEETTEEEEEETTT-------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--TTEEEEEE
T ss_pred ccEEECCEEEEEcCCC-------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--CCEEEEEE
Confidence 3467799999987643 49999998875 87643211110 01122567899988643 34899999
Q ss_pred CCCC--ceeee
Q 017349 294 PDDD--TWRYV 302 (373)
Q Consensus 294 ~~~~--~W~~~ 302 (373)
.+++ .|+.-
T Consensus 134 ~~TG~~~W~~~ 144 (582)
T 1flg_A 134 KNTGKVVWKKK 144 (582)
T ss_dssp SSSCCEEEEEE
T ss_pred CCCCCEEeeec
Confidence 9877 48753
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=87.30 E-value=21 Score=34.18 Aligned_cols=184 Identities=8% Similarity=-0.043 Sum_probs=105.3
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT 155 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~ 155 (373)
.++.||+... ....++++++.......+..... ..-.+.++...++.||+.-.. ...++++++.
T Consensus 47 ~~~~lywtD~----~~~~I~r~~~~g~~~~~v~~~g~-----~~P~GlAvD~~~~~LY~tD~~-------~~~I~v~~~d 110 (628)
T 4a0p_A 47 TDNRIYWTDI----SLKTISRAFMNGSALEHVVEFGL-----DYPEGMAVDWLGKNLYWADTG-------TNRIEVSKLD 110 (628)
T ss_dssp TTTEEEEEET----TTTEEEEEETTSCSCEEEECSSC-----SCCCEEEEETTTTEEEEEETT-------TTEEEEEETT
T ss_pred CCCEEEEEEC----CCCeEEEEECCCCCcEEEEeCCC-----CCcceEEEEeCCCEEEEEECC-------CCEEEEEecC
Confidence 3567777642 23457788877655544432221 123466665558999998432 3479999987
Q ss_pred CCceecc--CCCCCcceeeeeeEe--CCeEEEEc-CCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE---C
Q 017349 156 TNQWQLA--SPMLTPRSFFASGNV--NGKIMAVG-GTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM---G 227 (373)
Q Consensus 156 t~~W~~~--~~~~~~r~~~~~~~~--~~~iyv~G-G~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~---~ 227 (373)
...-+.+ ..+..| .++++. ++.||+.- |. ...+++.++....-+.+.. ....+....+ +
T Consensus 111 G~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~g~-------~~~I~r~~~dG~~~~~l~~---~~~~P~GlalD~~~ 177 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSP---RALALDPAEGFMYWTEWGG-------KPKIDRAAMDGSERTTLVP---NVGRANGLTIDYAK 177 (628)
T ss_dssp STTCEEEECSSCCCE---EEEEEETTTTEEEEEECSS-------SCEEEEEETTSCSCEEEEC---SCSSEEEEEEETTT
T ss_pred CCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCCCC-------CCEEEEEeCCCCceEEEEC---CCCCcceEEEcccc
Confidence 6543332 223233 244443 68999874 21 3578888887665444321 1122333333 5
Q ss_pred CEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCC
Q 017349 228 SKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 228 ~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
++||+.-... +.|+++|+....=+.+....+. -...++.+++||+..-. ...|+++|..++
T Consensus 178 ~~LY~aD~~~------~~I~~~d~dG~~~~v~~~~l~~--P~glav~~~~ly~tD~~-~~~I~~~dk~tg 238 (628)
T 4a0p_A 178 RRLYWTDLDT------NLIESSNMLGLNREVIADDLPH--PFGLTQYQDYIYWTDWS-RRSIERANKTSG 238 (628)
T ss_dssp TEEEEEETTT------TEEEEEETTSCSCEEEEECCSC--EEEEEEETTEEEEEETT-TTEEEEEETTTC
T ss_pred CEEEEEECCC------CEEEEEcCCCCceEEeeccCCC--ceEEEEECCEEEEecCC-CCEEEEEECCCC
Confidence 8899985433 6799999865332332221211 11236678999998643 567888886544
No 287
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=86.49 E-value=17 Score=32.33 Aligned_cols=150 Identities=13% Similarity=0.066 Sum_probs=77.4
Q ss_pred CEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC
Q 017349 78 PYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN 157 (373)
Q Consensus 78 ~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~ 157 (373)
+.+++.++. ...+.+||..+.+-...-..+ +. .....+..+..++..++.|+.+ ..+.+||..++
T Consensus 182 ~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~-~h---~~~v~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~ 246 (437)
T 3gre_A 182 KSLLVALTN----LSRVIIFDIRTLERLQIIENS-PR---HGAVSSICIDEECCVLILGTTR-------GIIDIWDIRFN 246 (437)
T ss_dssp CEEEEEEET----TSEEEEEETTTCCEEEEEECC-GG---GCCEEEEEECTTSCEEEEEETT-------SCEEEEETTTT
T ss_pred CCEEEEEeC----CCeEEEEeCCCCeeeEEEccC-CC---CCceEEEEECCCCCEEEEEcCC-------CeEEEEEcCCc
Confidence 444444443 235788998876543321111 00 0223334444467777777652 26899999876
Q ss_pred ceeccCCCCCcceeeeeeE-----eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec-cC----C------cc-----
Q 017349 158 QWQLASPMLTPRSFFASGN-----VNGKIMAVGGTGANINETMTAVECYDPESDTWTTA-AK----L------RM----- 216 (373)
Q Consensus 158 ~W~~~~~~~~~r~~~~~~~-----~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~----~------~~----- 216 (373)
+....-.......-..++. -++++++.|+.+ ..+.+||..+++-... .. . |.
T Consensus 247 ~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (437)
T 3gre_A 247 VLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLE 319 (437)
T ss_dssp EEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-------EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGG
T ss_pred cEEEEEecCCCCceEEEEeccccCCCccEEEEEcCC-------CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccc
Confidence 5432111111111112211 134456666554 4688899887753221 10 0 00
Q ss_pred ---------ccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCc
Q 017349 217 ---------GLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDT 255 (373)
Q Consensus 217 ---------~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~ 255 (373)
...-.+.+..++.+++.|+.+ ..+.+||+.+++
T Consensus 320 ~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d------~~i~~wd~~~~~ 361 (437)
T 3gre_A 320 ELNFCGIRSLNALSTISVSNDKILLTDEAT------SSIVMFSLNELS 361 (437)
T ss_dssp GCCCCCCCSGGGGCCEEEETTEEEEEEGGG------TEEEEEETTCGG
T ss_pred cceecccccCCceEEEEECCceEEEecCCC------CeEEEEECCCcc
Confidence 001122344478888888876 579999998775
No 288
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.38 E-value=6.9 Score=35.50 Aligned_cols=143 Identities=10% Similarity=0.106 Sum_probs=76.0
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eC-CeEEEEcCCCCCCCCcCceEEEEeCCCC
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VN-GKIMAVGGTGANINETMTAVECYDPESD 206 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~~~yd~~t~ 206 (373)
++.||+.-- . ..+.++|+.+++.+.+.. ...+ ...+++ -+ +.||+..... ......+..++...
T Consensus 149 ~g~Lyv~d~-------~-~~I~~id~~~~~v~~~~~-~~~~-P~~ia~d~~G~~lyvad~~~---~~~~~~v~~~~~~g- 214 (430)
T 3tc9_A 149 HNHLYLVGE-------Q-HPTRLIDFEKEYVSTVYS-GLSK-VRTICWTHEADSMIITNDQN---NNDRPNNYILTRES- 214 (430)
T ss_dssp EEEEEEEEB-------T-EEEEEEETTTTEEEEEEC-CCSC-EEEEEECTTSSEEEEEECCS---CTTSEEEEEEEGGG-
T ss_pred CCeEEEEeC-------C-CcEEEEECCCCEEEEEec-CCCC-cceEEEeCCCCEEEEEeCCC---CcccceEEEEeCCC-
Confidence 588998732 1 589999999988776543 1112 222332 23 4589886432 12223466666543
Q ss_pred eEE---eccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcc-eEEEEECCe-EE
Q 017349 207 TWT---TAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWT-GISIVLEGK-LF 279 (373)
Q Consensus 207 ~W~---~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~-l~ 279 (373)
.+. .++.+. ..+.+++. ++.||+.--.. ..+++||+.+..-..+........- +.++--+++ ||
T Consensus 215 ~~~~~~~l~~~~---~p~giavdp~~g~lyv~d~~~------~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 215 GFKVITELTKGQ---NCNGAETHPINGELYFNSWNA------GQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp TSCSEEEEEECS---SCCCEEECTTTCCEEEEETTT------TEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred ceeeeeeeccCC---CceEEEEeCCCCEEEEEECCC------CEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 232 222222 22334443 57898875332 5799999987765333221111111 222222455 88
Q ss_pred EEeeCCCcceEEEeCC
Q 017349 280 VISEHGDCPMKQYNPD 295 (373)
Q Consensus 280 v~gg~~~~~~~~yd~~ 295 (373)
+.... ...+++++.+
T Consensus 286 v~d~~-~~~I~~~~~d 300 (430)
T 3tc9_A 286 IVVVN-QHYILRSDYD 300 (430)
T ss_dssp EEETT-TTEEEEEEEE
T ss_pred EEECC-CCEEEEEeCC
Confidence 88643 5678887654
No 289
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=85.81 E-value=13 Score=30.31 Aligned_cols=107 Identities=9% Similarity=0.082 Sum_probs=60.2
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCC----ceec--------cCCCCCc---ceeeeeeE--eCCeEEE
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTN----QWQL--------ASPMLTP---RSFFASGN--VNGKIMA 183 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~----~W~~--------~~~~~~~---r~~~~~~~--~~~~iyv 183 (373)
+.++....++++|+|-|. .+|+||..++ .... .+.+|.. ..--++.. .++++|+
T Consensus 62 iDAa~~~~~g~~~fFkg~---------~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yf 132 (225)
T 3oyo_A 62 IDCSFHTEASEAYVFSGN---------HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYL 132 (225)
T ss_dssp CSEEEECSTTEEEEEETT---------EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEE
T ss_pred EeEEEEcCCCeEEEEcCC---------EEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEE
Confidence 334433248999999774 6888876432 1110 1122210 01122222 3689999
Q ss_pred EcCCCCCCCCcCceEEEEeCCCCeEEe----cc-CCccc-----cccccEEEE---CCEEEEEeCccCCCccCCceEEEe
Q 017349 184 VGGTGANINETMTAVECYDPESDTWTT----AA-KLRMG-----LARYDSAVM---GSKMYVTEGWTWPFMFSPRGGVYD 250 (373)
Q Consensus 184 ~GG~~~~~~~~~~~~~~yd~~t~~W~~----~~-~~~~~-----~~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~~yd 250 (373)
+-|.. .++||..+++... +. .+|.- ....-+|.. ++++|++-| +..++||
T Consensus 133 FkG~~---------yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--------~~ywr~d 195 (225)
T 3oyo_A 133 FKGNK---------YVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--------QNYVRID 195 (225)
T ss_dssp EETTE---------EEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--------TEEEEEE
T ss_pred EeCCe---------EEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--------CEEEEEe
Confidence 98764 8899977766543 11 12221 112224443 789999987 4588999
Q ss_pred CCC
Q 017349 251 INK 253 (373)
Q Consensus 251 ~~~ 253 (373)
..+
T Consensus 196 ~~~ 198 (225)
T 3oyo_A 196 FTP 198 (225)
T ss_dssp CCT
T ss_pred CCc
Confidence 983
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=85.65 E-value=26 Score=33.53 Aligned_cols=206 Identities=14% Similarity=0.042 Sum_probs=103.9
Q ss_pred ceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCc-eeccCCCCCcc
Q 017349 91 RIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQ-WQLASPMLTPR 169 (373)
Q Consensus 91 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~r 169 (373)
..++.+.|.....-......+ ......+.+....++.||+.-- ..+.++++++.... +..+-.-.. .
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~----~~~~~~~ld~~~~~~~ly~sD~-------~~~~I~r~~~~g~~~~~~v~~~~~-~ 84 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVG----GLEDAAAVDFVFSHGLIYWSDV-------SEEAIKRTEFNKTESVQNVVVSGL-L 84 (619)
T ss_dssp SSBEEEECCC---------CB----CCSCEEEEEEETTTTEEEEEET-------TTTEEEEEEC-----CEEEECSSC-S
T ss_pred cccEEEEeCCCCcceEEEEEc----CCCceEEEEEEeCCCEEEEEEC-------CCCeEEEEEccCCCceEEEEeCCC-C
Confidence 455777777654211111111 1113456666656899998732 23478888887653 222211111 2
Q ss_pred eeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec--cCCccccccccEEE--ECCEEEEEeCccCCCccC
Q 017349 170 SFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTWTTA--AKLRMGLARYDSAV--MGSKMYVTEGWTWPFMFS 243 (373)
Q Consensus 170 ~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~--~~~~lyv~gG~~~~~~~~ 243 (373)
...++++ .+++||+.... ...++++++....=+.+ ..+..|+ ..++ .+|.||+.--. ..
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~-------~~~I~v~~~dG~~~~~l~~~~l~~P~---~Iavdp~~g~ly~tD~g-----~~ 149 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSE-------TNRIEVSNLDGSLRKVLFWQELDQPR---AIALDPSSGFMYWTDWG-----EV 149 (619)
T ss_dssp CEEEEEEETTTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSCCC---CEEEETTTTEEEEEECS-----SS
T ss_pred CcCeEEEEecCCEEEEEeCC-------CCEEEEEECCCCCEEEEEeCCCCCCc---eEEEecCCCeEEEeccC-----CC
Confidence 2334444 37889997533 35788999876543333 2333332 3444 26889987511 12
Q ss_pred CceEEEeCCCCceeecccCccCCcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEe
Q 017349 244 PRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGV 321 (373)
Q Consensus 244 ~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 321 (373)
..|++.++....-+.+.. .....-...++- +++||+.... ...|+++|++...=..+.... ....++++..
T Consensus 150 ~~I~r~~~dG~~~~~l~~-~~~~~P~Glald~~~~~LY~aD~~-~~~I~~~~~dG~~~~~~~~~~-----~~~P~gi~~~ 222 (619)
T 3s94_A 150 PKIERAGMDGSSRFIIIN-SEIYWPNGLTLDYEEQKLYWADAK-LNFIHKSNLDGTNRQAVVKGS-----LPHPFALTLF 222 (619)
T ss_dssp CEEEEEETTSCSCEEEEC-SSCSSEEEEEEETTTTEEEEEETT-TCCEEEESSSCCEEC--------------CCCEEES
T ss_pred CEEEEEECCCCceEEEEe-CCCCCCcEEEEEccCCEEEEEeCC-CCeEEEecCCCCccEEEEeCC-----CCCceEEEEe
Confidence 578888886543333321 111111111222 6899999654 678999999764333332111 1234677777
Q ss_pred CCEEEEEeC
Q 017349 322 EGKIYVVSS 330 (373)
Q Consensus 322 ~~~l~i~GG 330 (373)
++.||+.--
T Consensus 223 ~~~ly~td~ 231 (619)
T 3s94_A 223 EDILYWTDW 231 (619)
T ss_dssp SSEEEEECT
T ss_pred CCEEEEecC
Confidence 888888764
No 291
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=84.73 E-value=14 Score=29.87 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=73.6
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCc-e--ecc----CCCCCcceeeeeeE--eCCeEEEEcCCCCCCCCcCceEE
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQ-W--QLA----SPMLTPRSFFASGN--VNGKIMAVGGTGANINETMTAVE 199 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~-W--~~~----~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~ 199 (373)
++++|+|-|. .+|+++..... . ..+ +.+|. ... ++.. .++++|+|-|.. .+
T Consensus 40 ~g~~~fFkg~---------~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~ID-AA~~~~~~~k~yfFkG~~---------yW 99 (218)
T 1gen_A 40 RGEIFFFKDR---------FIWRTVTPRDKPMGPLLVATFWPELPE-KID-AVYEAPQEEKAVFFAGNE---------YW 99 (218)
T ss_dssp TTEEEEEETT---------EEEEESSTTSCCEEEEEGGGTCTTSCS-CCS-EEEEETTTTEEEEEETTE---------EE
T ss_pred CCcEEEEECC---------EEEEEeCCCCccCCCEEHHHhcCCCCC-Ccc-EEEEECCCCEEEEEeCCE---------EE
Confidence 8999999774 46666654321 1 011 12221 222 2222 268999997753 78
Q ss_pred EEeCCCCe--E-EeccC--CccccccccEEEE---CCEEEEEeCccCCCccCCceEEEeCCCCceeec-----cc---Cc
Q 017349 200 CYDPESDT--W-TTAAK--LRMGLARYDSAVM---GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLM-----SD---GM 263 (373)
Q Consensus 200 ~yd~~t~~--W-~~~~~--~~~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~-----~~---~~ 263 (373)
+||..+.. + +.+.. +|.....--+|.. ++++|+|-| +..++||..+++-..- .. ..
T Consensus 100 ~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG--------~~ywr~d~~~~~v~~gyPr~i~~~w~g~ 171 (218)
T 1gen_A 100 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKKMDPGFPKLIADAWNAI 171 (218)
T ss_dssp EEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET--------TEEEEEETTTTEECSSCCEEHHHHSSSC
T ss_pred EEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC--------CEEEEEECccccccCCCCcchhhccCCC
Confidence 88853110 0 11222 2221112233433 689999977 4588999877643211 10 11
Q ss_pred cCCcceEEEEEC--CeEEEEeeCCCcceEEEeCCCCc
Q 017349 264 KEGWTGISIVLE--GKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 264 ~~~~~~~~~~~~--~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
+. ...++...+ |++|.+-|. ..++||..+..
T Consensus 172 p~-~idaAf~~~~~g~~YfFkg~---~y~~~~~~~~~ 204 (218)
T 1gen_A 172 PD-NLDAVVDLQGGGHSYFFKGA---YYLKLENQSLK 204 (218)
T ss_dssp CS-SCSEEEECTTTCEEEEEETT---EEEEEETTEEE
T ss_pred CC-CCCEEEEEcCCCcEEEEECC---EEEEEECCcee
Confidence 11 122333444 899999775 88999986554
No 292
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=84.02 E-value=21 Score=31.10 Aligned_cols=168 Identities=11% Similarity=0.080 Sum_probs=73.3
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCC-CCceeccCCCC--C-cceeeeeeEe-CC-eEEEEcCCCCCCCCc
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRAT-TNQWQLASPML--T-PRSFFASGNV-NG-KIMAVGGTGANINET 194 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~-t~~W~~~~~~~--~-~r~~~~~~~~-~~-~iyv~GG~~~~~~~~ 194 (373)
++.+....+..+|+... ..+.+++||.. +++...+.... . ......++.. ++ .+|+....+
T Consensus 148 ~~~~~spdG~~l~~~~~-------~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~------ 214 (365)
T 1jof_A 148 HGMVFDPTETYLYSADL-------TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG------ 214 (365)
T ss_dssp EEEEECTTSSEEEEEET-------TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT------
T ss_pred eEEEECCCCCEEEEEcC-------CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC------
Confidence 34443332345776531 12378899987 66654433221 1 1111222222 34 566664322
Q ss_pred CceEEEE--eCCCCeEE----eccCCcccc---c-------cccEEE-E--CCE-EEEEeCccCCCccCCceEEEeCC-C
Q 017349 195 MTAVECY--DPESDTWT----TAAKLRMGL---A-------RYDSAV-M--GSK-MYVTEGWTWPFMFSPRGGVYDIN-K 253 (373)
Q Consensus 195 ~~~~~~y--d~~t~~W~----~~~~~~~~~---~-------~~~~~~-~--~~~-lyv~gG~~~~~~~~~~i~~yd~~-~ 253 (373)
..+.+| |..+++.. .+..+|... . ....+. + +|+ ||+.. ..........+.+|+.. +
T Consensus 215 -~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~-~~~~~~~~~~i~v~~~~~~ 292 (365)
T 1jof_A 215 -NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS-RANKFELQGYIAGFKLRDC 292 (365)
T ss_dssp -TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE-EESSTTSCCEEEEEEECTT
T ss_pred -CeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC-CCCCCCCCCeEEEEEECCC
Confidence 234554 55566543 344444321 1 122233 3 554 66543 22111111268888875 5
Q ss_pred Cceeeccc--C-ccCCcceEEEEE---CCeEEEEeeCCCcceEEEeCCCCceeeec
Q 017349 254 DTWNLMSD--G-MKEGWTGISIVL---EGKLFVISEHGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 254 ~~W~~~~~--~-~~~~~~~~~~~~---~~~l~v~gg~~~~~~~~yd~~~~~W~~~~ 303 (373)
++.+.+.. + ....-...+..- +|+.+++++...+.+.+|+.+.+.-+.++
T Consensus 293 g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l~~~~ 348 (365)
T 1jof_A 293 GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFLHRVA 348 (365)
T ss_dssp SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEEEEEE
T ss_pred CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhCceee
Confidence 65543211 0 111111222223 44444444433467778877655444333
No 293
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=83.95 E-value=5.7 Score=32.55 Aligned_cols=101 Identities=8% Similarity=0.047 Sum_probs=57.8
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEe--CCC-------------CceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCC
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYR--ATT-------------NQWQLASPMLTPRSFFASGNV--NGKIMAVGGTGAN 190 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd--~~t-------------~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~ 190 (373)
.++++|+|-|. .+|+|+ +.+ ..|..++....+..--++... ++++|+|-|..
T Consensus 71 ~~g~~~fFKg~---------~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG~~-- 139 (227)
T 3lp9_A 71 ENNEAFIFYEN---------FCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKGDQ-- 139 (227)
T ss_dssp STTEEEEEETT---------EEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEETTE--
T ss_pred CCCEEEEEeCC---------EEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEECCE--
Confidence 48999999774 688888 321 124434321102122223332 68999998764
Q ss_pred CCCcCceEEEEeCCCCeEEe-----cc-CCcccc-----ccccEEEE---CCEEEEEeCccCCCccCCceEEEeCCCC
Q 017349 191 INETMTAVECYDPESDTWTT-----AA-KLRMGL-----ARYDSAVM---GSKMYVTEGWTWPFMFSPRGGVYDINKD 254 (373)
Q Consensus 191 ~~~~~~~~~~yd~~t~~W~~-----~~-~~~~~~-----~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~~yd~~~~ 254 (373)
.++||..+++-.. +. .+|... ..--+|+. ++++|++-| +..++||..++
T Consensus 140 -------yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg--------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 140 -------YARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD--------DHYARVKVTPX 202 (227)
T ss_dssp -------EEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET--------TEEEEEECCSS
T ss_pred -------EEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC--------CEEEEEECCcc
Confidence 8899987664221 11 122111 12224443 589999987 45789998776
No 294
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=83.77 E-value=41 Score=34.31 Aligned_cols=98 Identities=6% Similarity=-0.050 Sum_probs=53.1
Q ss_pred eEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceE-EEeCCCCceeecccCccCCcceEEEEEC
Q 017349 197 AVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGG-VYDINKDTWNLMSDGMKEGWTGISIVLE 275 (373)
Q Consensus 197 ~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~-~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 275 (373)
.+++++..+..-..+...+.......+.. +|+.+++++.. ..++ .||..++.-..+.. ........+..-+
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~------~~l~~~~d~~~~~~~~l~~-~~~~~~~~~~SpD 389 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTRE------GDFLGIYDYRTGKAEKFEE-NLGNVFAMGVDRN 389 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETT------EEEEEEEETTTCCEEECCC-CCCSEEEEEECTT
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECC------CceEEEEECCCCCceEecC-CccceeeeEECCC
Confidence 57788877776555433222111111222 55544444322 4688 89998876655441 1111111112236
Q ss_pred CeEEEEeeCCCcceEEEeCCCCceeeec
Q 017349 276 GKLFVISEHGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 276 ~~l~v~gg~~~~~~~~yd~~~~~W~~~~ 303 (373)
|+.++++.. ...+++||.++++-..+.
T Consensus 390 G~~la~~~~-~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 390 GKFAVVAND-RFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp SSEEEEEET-TSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECC-CCeEEEEECCCCceEEec
Confidence 676666654 458999999988766654
No 295
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=83.04 E-value=35 Score=32.96 Aligned_cols=263 Identities=8% Similarity=-0.014 Sum_probs=121.2
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATT 156 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t 156 (373)
++++|.+-........-+++ ......|..+-....-........+...++.+++.++++-.. .+ .....++++|..+
T Consensus 88 g~~~y~~~~~~~~~~~~~~r-~~~~~~~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~-~G-~~~~~i~v~dl~t 164 (693)
T 3iuj_A 88 GRYHYFFKNDGLQNQNVLWR-QQEGKPAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSL-AG-SDWREIHLMDVES 164 (693)
T ss_dssp TTEEEEEEECSSCSSCEEEE-ECTTSCCEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEEC-SS-CCEEEEEEEETTT
T ss_pred CCEEEEEEEcCCCceeEEEE-eCCCCCcEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEec-CC-CceEEEEEEECCC
Confidence 56777665433222222333 223344554422211000001234444556677655553211 11 2235899999999
Q ss_pred CceeccCCCCCcceeeeeeEeCCe-EEEEcCCCCC-----CCCcCceEEEEeCCCCeE--EeccCCcc--ccccccEE-E
Q 017349 157 NQWQLASPMLTPRSFFASGNVNGK-IMAVGGTGAN-----INETMTAVECYDPESDTW--TTAAKLRM--GLARYDSA-V 225 (373)
Q Consensus 157 ~~W~~~~~~~~~r~~~~~~~~~~~-iyv~GG~~~~-----~~~~~~~~~~yd~~t~~W--~~~~~~~~--~~~~~~~~-~ 225 (373)
++..... ++..+.....-. +++ ||........ .......+++++..+..= +.+-..+. +....... .
T Consensus 165 g~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~S 242 (693)
T 3iuj_A 165 KQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVT 242 (693)
T ss_dssp CSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEEC
T ss_pred CCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEc
Confidence 9865431 111111112223 544 4443322100 012345688888776542 12211111 11112222 2
Q ss_pred ECCEEEEEeCccCCCccCCceEEEeCCCC--ceeecccCccCCcceEEEEECCeEEEEeeCC--CcceEEEeCCCC---c
Q 017349 226 MGSKMYVTEGWTWPFMFSPRGGVYDINKD--TWNLMSDGMKEGWTGISIVLEGKLFVISEHG--DCPMKQYNPDDD---T 298 (373)
Q Consensus 226 ~~~~lyv~gG~~~~~~~~~~i~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~--~~~~~~yd~~~~---~ 298 (373)
-+|+..++.... ....+.++.+|..+. .|+.+.... ..........+++||+....+ ...++.+|+.+. .
T Consensus 243 pDg~~l~~~~~~--~~~~~~i~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~ 319 (693)
T 3iuj_A 243 EDDRFLLISAAN--STSGNRLYVKDLSQENAPLLTVQGDL-DADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH 319 (693)
T ss_dssp TTSCEEEEEEES--SSSCCEEEEEETTSTTCCCEEEECSS-SSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG
T ss_pred CCCCEEEEEEcc--CCCCcEEEEEECCCCCCceEEEeCCC-CceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc
Confidence 256644443221 112258899998776 677765422 222222234588899887543 467899998763 4
Q ss_pred eeeecCCCCCCcccccceEEEEeCCEEEEEeCCceeeeeEEEEeecCCcccceEEecCC
Q 017349 299 WRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSSGLNVAIGRVYEEQNGGISAEWKVMTAP 357 (373)
Q Consensus 299 W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG~~~~~~~~~~~~~~d~~~~~W~~~~~p 357 (373)
|+.+. +.. .. .. ++...++.|++..- ......++. +|.+....+.++.|
T Consensus 320 ~~~l~--~~~-~~--~~-~~s~~g~~lv~~~~--~~g~~~l~~--~d~~g~~~~~l~~p 368 (693)
T 3iuj_A 320 WRDLI--PER-QQ--VL-TVHSGSGYLFAEYM--VDATARVEQ--FDYEGKRVREVALP 368 (693)
T ss_dssp CEEEE--CCC-SS--CE-EEEEETTEEEEEEE--ETTEEEEEE--ECTTSCEEEEECCS
T ss_pred cEEEe--cCC-CC--EE-EEEEECCEEEEEEE--ECCeeEEEE--EECCCCeeEEeecC
Confidence 88765 333 11 11 55555666655442 122234444 33333334455444
No 296
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=82.45 E-value=22 Score=30.31 Aligned_cols=184 Identities=8% Similarity=-0.025 Sum_probs=90.9
Q ss_pred ceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcce
Q 017349 91 RIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRS 170 (373)
Q Consensus 91 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~ 170 (373)
...++.+|..+..-..+ . . ......+.+++.+++...... .....++++|..+++.+.+...+.
T Consensus 42 ~~~l~~~d~~~~~~~~l---~-------~-~~~~~~SpDg~~la~~~~~~~--~~~~~l~~~~~~~g~~~~l~~~~~--- 105 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI---E-------N-ATMPRISPDGKKIAFMRANEE--KKVSEIWVADLETLSSKKILEAKN--- 105 (347)
T ss_dssp EEEEEEEETTTCCEEEE---E-------S-CEEEEECTTSSEEEEEEEETT--TTEEEEEEEETTTTEEEEEEEESE---
T ss_pred cceEEEEeCCCCceEEc---c-------c-CCCeEECCCCCEEEEEEeccC--CCcceEEEEECCCCceEEEEcCCC---
Confidence 45678889888766555 1 1 122233335543333322110 124479999998887666544332
Q ss_pred eeeeeEe-CCe-EEEEcCCCCC---------------C----CCcCceEEEEeCCCCeE-EeccCCccccccccEEEE-C
Q 017349 171 FFASGNV-NGK-IMAVGGTGAN---------------I----NETMTAVECYDPESDTW-TTAAKLRMGLARYDSAVM-G 227 (373)
Q Consensus 171 ~~~~~~~-~~~-iyv~GG~~~~---------------~----~~~~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~-~ 227 (373)
....... +++ |++....... + ......++++|..+++. +.+.. + .....+.. +
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spd 181 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRD 181 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETT
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCC
Confidence 2222222 444 4444311000 0 01135689999999887 65544 3 22233333 4
Q ss_pred CEEEEEeCccCCCc--c-CCceEEEeCCCCceeecccCccCCcceEEEEECCe-EEEEeeCC------CcceEEEeCCCC
Q 017349 228 SKMYVTEGWTWPFM--F-SPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGK-LFVISEHG------DCPMKQYNPDDD 297 (373)
Q Consensus 228 ~~lyv~gG~~~~~~--~-~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-l~v~gg~~------~~~~~~yd~~~~ 297 (373)
| +++.+....... . ...++.+| +++++.+... .... ...-+|+ |+..+... ...++.+| ++
T Consensus 182 g-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~~~~-~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~ 252 (347)
T 2gop_A 182 K-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK---VSFY-AVDSDGERILLYGKPEKKYMSEHNKLYIYD--GK 252 (347)
T ss_dssp E-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE---ESEE-EEEECSSCEEEEECCSSSCCCSSCEEEEEC--SS
T ss_pred e-EEEEEecccccccccccccEEEeC--CCceEEeccC---ccee-eECCCCCEEEEEEccccCCccccceEEEEC--CC
Confidence 5 555553321111 1 34678888 6677665432 1111 1234565 44443221 34788888 56
Q ss_pred ceeeec
Q 017349 298 TWRYVG 303 (373)
Q Consensus 298 ~W~~~~ 303 (373)
++..+.
T Consensus 253 ~~~~l~ 258 (347)
T 2gop_A 253 EVMGIL 258 (347)
T ss_dssp CEEESS
T ss_pred ceEecc
Confidence 666554
No 297
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=82.40 E-value=24 Score=30.61 Aligned_cols=64 Identities=11% Similarity=0.119 Sum_probs=36.8
Q ss_pred CCEEEEEeCccCCCccCCc-eEEEeCCCCceee-cccC-ccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCC
Q 017349 227 GSKMYVTEGWTWPFMFSPR-GGVYDINKDTWNL-MSDG-MKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 227 ~~~lyv~gG~~~~~~~~~~-i~~yd~~~~~W~~-~~~~-~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
++++++.|+.+ .. +.+||..+++-.. +... ........+..-++++++.|+. ...+.+||....
T Consensus 206 ~g~~l~s~s~d------~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~-d~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQD------GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD-KWTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETT------CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET-TCEEEEEESSCC
T ss_pred CCCEEEEEeCC------CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC-CCEEEEEEccCC
Confidence 67777777766 56 8999998765321 1100 1111111112226777777765 567888888654
No 298
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=81.92 E-value=30 Score=31.52 Aligned_cols=129 Identities=14% Similarity=0.130 Sum_probs=68.1
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCC---------eEEeccCCccccccccEEE---ECCEEEEEeCccCCC
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESD---------TWTTAAKLRMGLARYDSAV---MGSKMYVTEGWTWPF 240 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~---------~W~~~~~~~~~~~~~~~~~---~~~~lyv~gG~~~~~ 240 (373)
+++...+++|+|-|.. .++++.... .|.. +|.. --++. .++++|+|-|.
T Consensus 267 Ai~~~~ge~y~Fkg~~---------~wr~~~~~~~~~p~~I~~~Wp~---LP~~---iDAa~~~~~~g~~~fFKg~---- 327 (450)
T 1su3_A 267 AITTIRGEVMFFKDRF---------YMRTNPFYPEVELNFISVFWPQ---LPNG---LEAAYEFADRDEVRFFKGN---- 327 (450)
T ss_dssp EEEEETTEEEEEETTE---------EEECCTTSSSCEEEEGGGTCTT---SCSS---CCEEEEEGGGTEEEEEETT----
T ss_pred eEEecCCeEEEEeCCE---------EEEEcCCCCcccceehhHhccC---CCCC---eeEEEEEcCCCeEEEEeCC----
Confidence 4556789999998753 444444332 3332 2321 22332 26899999773
Q ss_pred ccCCceEEEeCCCCc--e-eecc--cCccC--CcceEEEEE--CCeEEEEeeCCCcceEEEeCCCCceee-----ecC--
Q 017349 241 MFSPRGGVYDINKDT--W-NLMS--DGMKE--GWTGISIVL--EGKLFVISEHGDCPMKQYNPDDDTWRY-----VGG-- 304 (373)
Q Consensus 241 ~~~~~i~~yd~~~~~--W-~~~~--~~~~~--~~~~~~~~~--~~~l~v~gg~~~~~~~~yd~~~~~W~~-----~~~-- 304 (373)
.+++|+..+-. + ..+. ...|. ....++... ++++|++-|. ..|+||..+++-.. +..
T Consensus 328 ----~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~---~yw~yd~~~~~~~~gYPk~I~~~f 400 (450)
T 1su3_A 328 ----KYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN---KYWRYDEYKRSMDPGYPKMIAHDF 400 (450)
T ss_dssp ----EEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT---EEEEEETTTTEECSSCSEEHHHHS
T ss_pred ----EEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC---EEEEEeCCCccccCCCCcchhhcC
Confidence 46677643210 1 1111 00111 122333333 6899999875 89999986542211 110
Q ss_pred CCCCCcccccceEEEEeCCEEEEEeCC
Q 017349 305 DKFPCEVMHRPFAVNGVEGKIYVVSSG 331 (373)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~l~i~GG~ 331 (373)
..+| ...-+++..++++|+|-|.
T Consensus 401 pgip----~~iDAA~~~~g~~YFFkg~ 423 (450)
T 1su3_A 401 PGIG----HKVDAVFMKDGFFYFFHGT 423 (450)
T ss_dssp TTSC----SCCSEEEEETTEEEEEETT
T ss_pred CCCC----CCccEEEEcCCeEEEEeCC
Confidence 0122 2233444578999999884
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=81.63 E-value=26 Score=30.49 Aligned_cols=139 Identities=14% Similarity=0.130 Sum_probs=69.0
Q ss_pred EeccCCEEEEEcCccCCCCCCcceeEEEeCCCCc---eeccCCCCCcceee-eeeEe--CCeEEEEcCCCCCCCCcCceE
Q 017349 125 SLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQ---WQLASPMLTPRSFF-ASGNV--NGKIMAVGGTGANINETMTAV 198 (373)
Q Consensus 125 ~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~~~~ 198 (373)
++..+|.+||.+... ...++++++.... |-.-.+....+... +++.. ++.|++..+ . ..+
T Consensus 143 avD~~GnaYVt~s~~------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-------g~L 208 (334)
T 2p9w_A 143 AQDRDGNSYVAFALG------MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P-------RAL 208 (334)
T ss_dssp EECTTSCEEEEEEES------SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S-------SSE
T ss_pred EECCCCCEEEeCCCC------CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C-------CeE
Confidence 333489999976541 1479999998652 43222222234333 34444 446666654 3 358
Q ss_pred EEEeCCCCeEEeccCC--c--ccccccc---EEEECCEEEEEeCccCCCccCCceEEEeCCCCceeeccc----Cc--cC
Q 017349 199 ECYDPESDTWTTAAKL--R--MGLARYD---SAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD----GM--KE 265 (373)
Q Consensus 199 ~~yd~~t~~W~~~~~~--~--~~~~~~~---~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~----~~--~~ 265 (373)
+.||..+-....++.. . ....... ..-.+|++.++.... +....+-...+ |+.... +. ..
T Consensus 209 ~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~------~~~~~l~S~Dg-W~sa~~~g~~~~~~~~ 281 (334)
T 2p9w_A 209 TAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA------PYAISFRSWDN-WKSANIKKTKRSELQN 281 (334)
T ss_dssp EEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET------TEEEEEECSST-TSEEEEEEEECGGGGS
T ss_pred EEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCC------CCEEEEECCCC-cceeEEeeeecCcccc
Confidence 8999874322011100 0 0001111 223688885554322 23455555455 976532 11 11
Q ss_pred CcceEEEE----ECCeEEEEeeC
Q 017349 266 GWTGISIV----LEGKLFVISEH 284 (373)
Q Consensus 266 ~~~~~~~~----~~~~l~v~gg~ 284 (373)
......++ .+++||++.+.
T Consensus 282 ~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 282 SGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp SCEEEEEEEEETTEEEEEEEECC
T ss_pred CceeEEEEeccccCCeEEEEeee
Confidence 11212233 67999999753
No 300
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=80.91 E-value=44 Score=32.69 Aligned_cols=140 Identities=10% Similarity=-0.025 Sum_probs=70.5
Q ss_pred ceeEEEeCCCCcee--ccCCCCCcceeeeeeE-eCC-eEEEEcCCCCCCCCcCceEEEEeCCCC--eE--EeccCCcccc
Q 017349 147 QSTIMYRATTNQWQ--LASPMLTPRSFFASGN-VNG-KIMAVGGTGANINETMTAVECYDPESD--TW--TTAAKLRMGL 218 (373)
Q Consensus 147 ~~~~~yd~~t~~W~--~~~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~yd~~t~--~W--~~~~~~~~~~ 218 (373)
..+++.+..+..-. .+-.-+.......... -++ .|++..... ..++++++|..+. .+ +.+.+-....
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-----~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 321 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP-----ETAEVHLLDLRKGNAHNTLEIVRPREKGV 321 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECS-----SCEEEEEEESSSCTTCCCEEESSCCCTTC
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCC-----CCceEEEEECCCCCCCceeEEeecCCCCc
Confidence 47888888776422 1111111222222222 244 444443221 2467899998875 46 5553211111
Q ss_pred ccccEE-EECCEEEEEeCccCCCccCCceEEEeCCC-Cceee-cccCccCCcceEEEEECCeEEEEeeCC-CcceEEEeC
Q 017349 219 ARYDSA-VMGSKMYVTEGWTWPFMFSPRGGVYDINK-DTWNL-MSDGMKEGWTGISIVLEGKLFVISEHG-DCPMKQYNP 294 (373)
Q Consensus 219 ~~~~~~-~~~~~lyv~gG~~~~~~~~~~i~~yd~~~-~~W~~-~~~~~~~~~~~~~~~~~~~l~v~gg~~-~~~~~~yd~ 294 (373)
..+.. ..++.||+....+ ......++.+|..+ +.|+. +-..............++.|++....+ ...++++|+
T Consensus 322 -~~s~~~~~g~~l~~~t~~~--~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 322 -RYDVQMHGTSHLVILTNEG--GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp -CEEEEEETTTEEEEEECTT--TCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred -eEEEeeeeCCEEEEEeCCC--CCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 11121 2267788876543 12235789999886 68876 432111111122234477777765443 457888886
No 301
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=79.65 E-value=18 Score=31.45 Aligned_cols=145 Identities=12% Similarity=0.145 Sum_probs=63.7
Q ss_pred eEEEeCCCCceeccCCCCCc--ceeeeeeE-eCC-eEEEEcCCCCCCCCcCceEEEEeCC-CCeEEeccCCcc-cccccc
Q 017349 149 TIMYRATTNQWQLASPMLTP--RSFFASGN-VNG-KIMAVGGTGANINETMTAVECYDPE-SDTWTTAAKLRM-GLARYD 222 (373)
Q Consensus 149 ~~~yd~~t~~W~~~~~~~~~--r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~yd~~-t~~W~~~~~~~~-~~~~~~ 222 (373)
++.+|+.+++.+.+...+.. .....++. -++ .||+.. . . .+.+||.. +++-..+...+. ....+.
T Consensus 18 ~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~-~---~-----~v~~~~~~~~g~~~~~~~~~~~g~~~~~ 88 (365)
T 1jof_A 18 TVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAA-M---K-----KWSSFAVKSPTEIVHEASHPIGGHPRAN 88 (365)
T ss_dssp EEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEE-B---T-----EEEEEEEEETTEEEEEEEEECCSSGGGG
T ss_pred EEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEc-c---c-----eEEEEEECCCCCEEEeeEeecCCCCccE
Confidence 44567788877665432211 11222322 244 466543 2 1 57888876 665443322111 111112
Q ss_pred EEEECCE-EEEEeCccCC---Cc-----cCCceEEEeCCC-Cceee-cccC-ccCCcceEEEEE--CCe-EEEEeeCCCc
Q 017349 223 SAVMGSK-MYVTEGWTWP---FM-----FSPRGGVYDINK-DTWNL-MSDG-MKEGWTGISIVL--EGK-LFVISEHGDC 287 (373)
Q Consensus 223 ~~~~~~~-lyv~gG~~~~---~~-----~~~~i~~yd~~~-~~W~~-~~~~-~~~~~~~~~~~~--~~~-l~v~gg~~~~ 287 (373)
+..-+|+ +|++....+. .. ....+.+|++.. ++... +... .........+.+ +|+ ||+. ..+..
T Consensus 89 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~-~~~~~ 167 (365)
T 1jof_A 89 DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA-DLTAN 167 (365)
T ss_dssp CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE-ETTTT
T ss_pred EECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE-cCCCC
Confidence 2223566 3543321000 00 124577888763 44322 1110 011112222333 555 5544 33356
Q ss_pred ceEEEeCC-CCceeeec
Q 017349 288 PMKQYNPD-DDTWRYVG 303 (373)
Q Consensus 288 ~~~~yd~~-~~~W~~~~ 303 (373)
.+.+||.+ +++...+.
T Consensus 168 ~v~~~~~~~~g~~~~~~ 184 (365)
T 1jof_A 168 KLWTHRKLASGEVELVG 184 (365)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred EEEEEEECCCCCEEEee
Confidence 89999987 67665443
No 302
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=79.46 E-value=36 Score=30.78 Aligned_cols=71 Identities=11% Similarity=0.145 Sum_probs=38.8
Q ss_pred CCEEEEEeCccCCC---ccCCceEEEeCCCCcee-ecccCccCCcceEEEEECCe--EEEEeeCCCcceEEEeCCCCcee
Q 017349 227 GSKMYVTEGWTWPF---MFSPRGGVYDINKDTWN-LMSDGMKEGWTGISIVLEGK--LFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 227 ~~~lyv~gG~~~~~---~~~~~i~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~~--l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
++++|+.-.....+ ...+.+.++|..+.+=. .++ .+..-.+..+.-+++ +|+.. ...+.+.++|..+.+-.
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~--vg~~P~gia~spDg~~~lyv~n-~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE--LGHEIDSINVSQDAEPLLYALS-AGTQTLHIYDAATGEEL 406 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE--EEEEECEEEECCSSSCEEEEEE-TTTTEEEEEETTTCCEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE--CCCCcCeEEEccCCCEEEEEEc-CCCCeEEEEECCCCCEE
Confidence 47899875321111 12357999999887632 222 222122222333555 55544 33679999998765433
No 303
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=79.14 E-value=23 Score=32.00 Aligned_cols=151 Identities=15% Similarity=0.120 Sum_probs=77.5
Q ss_pred eEEEEec--cCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCce
Q 017349 121 FACTSLP--RQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTA 197 (373)
Q Consensus 121 ~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 197 (373)
.+.++.. .++.||+.-.. ..++++|+.+++...+.. . ......++. -++.||+..-.. ......
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~--------~~I~~id~~~g~v~~~~~-~-~~~P~giavd~dG~lyVad~~~---~~~~~g 208 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR--------DAFRHVDFVNQYVDIKTT-N-IGQCADVNFTLNGDMVVVDDQS---SDTNTG 208 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT--------SCEEEEETTTTEEEEECC-C-CSCEEEEEECTTCCEEEEECCS---CTTSEE
T ss_pred ceEEEccccCCCEEEEEeCC--------CCEEEEECCCCEEEEeec-C-CCCccEEEECCCCCEEEEcCCC---Ccccce
Confidence 3444442 14899997321 589999998887766543 1 111223333 355688875321 111234
Q ss_pred EEEEeCCCCeEE---eccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCce-eecccCccCCcc-eE
Q 017349 198 VECYDPESDTWT---TAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTW-NLMSDGMKEGWT-GI 270 (373)
Q Consensus 198 ~~~yd~~t~~W~---~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W-~~~~~~~~~~~~-~~ 270 (373)
+..++.... +. .++.+. .....++. ++.||+.-... ..+++||+.++.- +.+......+.. +.
T Consensus 209 v~~~~~~~~-~~~~~~~~~~~---~P~giavd~~~G~lyv~d~~~------~~V~~~d~~~g~~~~~~~~~~~~~~~~~i 278 (433)
T 4hw6_A 209 IYLFTRASG-FTERLSLCNAR---GAKTCAVHPQNGKIYYTRYHH------AMISSYDPATGTLTEEEVMMDTKGSNFHI 278 (433)
T ss_dssp EEEECGGGT-TCCEEEEEECS---SBCCCEECTTTCCEEECBTTC------SEEEEECTTTCCEEEEEEECSCCSSCEEE
T ss_pred EEEEECCCC-eeccccccccC---CCCEEEEeCCCCeEEEEECCC------CEEEEEECCCCeEEEEEeccCCCCCcccE
Confidence 555655322 21 222111 11223333 67888764322 5799999987765 322211111111 22
Q ss_pred EEEECC-eEEEEeeCCCcceEEEeCC
Q 017349 271 SIVLEG-KLFVISEHGDCPMKQYNPD 295 (373)
Q Consensus 271 ~~~~~~-~l~v~gg~~~~~~~~yd~~ 295 (373)
++.-++ .||+.... ...|++++.+
T Consensus 279 a~dpdG~~LYvad~~-~~~I~~~~~d 303 (433)
T 4hw6_A 279 VWHPTGDWAYIIYNG-KHCIYRVDYN 303 (433)
T ss_dssp EECTTSSEEEEEETT-TTEEEEEEBC
T ss_pred EEeCCCCEEEEEeCC-CCEEEEEeCC
Confidence 222244 48888643 5688887654
No 304
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=78.58 E-value=32 Score=29.75 Aligned_cols=170 Identities=7% Similarity=-0.050 Sum_probs=78.5
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeE
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTW 208 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 208 (373)
.+.+.+.|+.. ..+.+||..+++-...-..+. .-.++....+.+++... ..+.+||..+..
T Consensus 70 ~~~~~~~~~~d-------~~v~iWd~~~~~~~~~~~~~~--~v~~v~~~~~~~~~~~~---------~~i~i~d~~~~~- 130 (355)
T 3vu4_A 70 TNYVAFVTGVK-------EVVHIWDDVKKQDVSRIKVDA--PVKDLFLSREFIVVSYG---------DVISVFKFGNPW- 130 (355)
T ss_dssp SSEEEEECSST-------TEEEEEETTTTEEEEEEECSS--CEEEEEECSSEEEEEET---------TEEEEEESSTTC-
T ss_pred CCEEEEEECCc-------cEEEEEECCCCcEEEEEECCC--ceEEEEEcCCEEEEEEc---------CEEEEEECCCCc-
Confidence 55666777642 278999998875432211111 11222223344444321 258899987761
Q ss_pred EeccCCccccccccEEEECCEEEEE-eCccCCCccCCceEEEeCCCCc-eee-------------cccCccCCcceE-EE
Q 017349 209 TTAAKLRMGLARYDSAVMGSKMYVT-EGWTWPFMFSPRGGVYDINKDT-WNL-------------MSDGMKEGWTGI-SI 272 (373)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~lyv~-gG~~~~~~~~~~i~~yd~~~~~-W~~-------------~~~~~~~~~~~~-~~ 272 (373)
+.+..+..+ ....+...+.+.+. |+.+ ..+.+||..++. +.. +.. ........ ++
T Consensus 131 ~~~~~~~~~--~~~~~~s~~~la~~sg~~~------g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~-~~~h~~~v~~~ 201 (355)
T 3vu4_A 131 KRITDDIRF--GGVCEFSNGLLVYSNEFNL------GQIHITKLQSSGSATTQDQGVQQKAILGKGVL-IKAHTNPIKMV 201 (355)
T ss_dssp CBSSCCEEE--EEEEEEETTEEEEEESSCT------TCEEEEECCC------------------CCEE-ECCCSSCEEEE
T ss_pred eeeEEeccC--CceEEEEccEEEEeCCCcC------cEEEEEECCCCCccccccccccccccCcccEE-EEccCCceEEE
Confidence 122222221 11122223444433 4433 568899998753 111 110 11111111 12
Q ss_pred E--ECCeEEEEeeCCCcc-eEEEeCCCCceee-ecCCCCCCcccccceEE-EEeCCEEEEEeCC
Q 017349 273 V--LEGKLFVISEHGDCP-MKQYNPDDDTWRY-VGGDKFPCEVMHRPFAV-NGVEGKIYVVSSG 331 (373)
Q Consensus 273 ~--~~~~l~v~gg~~~~~-~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~-~~~~~~l~i~GG~ 331 (373)
. -++++++.|+. ... +..||..+.+-.. +...... ..-.++ ...++++++.|+.
T Consensus 202 ~~s~~g~~l~s~s~-d~~~v~iwd~~~~~~~~~~~~g~h~----~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 202 RLNRKSDMVATCSQ-DGTIIRVFKTEDGVLVREFRRGLDR----ADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp EECTTSSEEEEEET-TCSEEEEEETTTCCEEEEEECTTCC----SCEEEEEECTTSCEEEEEET
T ss_pred EECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEEEcCCCC----CcEEEEEECCCCCEEEEEEC
Confidence 2 26777777776 455 9999998664332 2100012 122223 2346777777764
No 305
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=77.82 E-value=24 Score=27.94 Aligned_cols=108 Identities=12% Similarity=0.036 Sum_probs=59.0
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCce---eccCC----CCCcceeeeeeEe--CCeEEEEcCCCCCC
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQW---QLASP----MLTPRSFFASGNV--NGKIMAVGGTGANI 191 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W---~~~~~----~~~~r~~~~~~~~--~~~iyv~GG~~~~~ 191 (373)
..++....++++|+|-|. .+|+|+..+... +.+.. +|..... ++... ++++|++-|..
T Consensus 53 iDAa~~~~~g~~yfFkg~---------~yw~~~~~~~~~gyPk~I~~~~~glP~~~ID-AA~~~~~~g~~yfFkG~~--- 119 (196)
T 3c7x_A 53 INTAYERKDGKFVFFKGD---------KHWVFDEASLEPGYPKHIKELGRGLPTDKID-AALFWMPNGKTYFFRGNK--- 119 (196)
T ss_dssp CCEEEECTTSCEEEEETT---------EEEEEETTEECTTCSEEGGGTCBSCCSSCCS-EEEEETTTTEEEEEETTE---
T ss_pred ccEEEEeCCCcEEEecCC---------EEEEEeCCcccCCCCeEhhhcCCCCCCCccc-EEEEEccCCEEEEEECCE---
Confidence 334433347889999764 689998543211 11211 2222222 22222 68999997753
Q ss_pred CCcCceEEEEeCCCCeEEe-----ccCCccccccccEEE-E-CC-EEEEEeCccCCCccCCceEEEeCCCCc
Q 017349 192 NETMTAVECYDPESDTWTT-----AAKLRMGLARYDSAV-M-GS-KMYVTEGWTWPFMFSPRGGVYDINKDT 255 (373)
Q Consensus 192 ~~~~~~~~~yd~~t~~W~~-----~~~~~~~~~~~~~~~-~-~~-~lyv~gG~~~~~~~~~~i~~yd~~~~~ 255 (373)
.++||..+++-.. +...+.-.....+|. . ++ ++|++-| +..++||..+.+
T Consensus 120 ------yw~yd~~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFkg--------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 120 ------YYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKG--------NKYWKFNNQKLK 177 (196)
T ss_dssp ------EEEEETTTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEET--------TEEEEEETTTTE
T ss_pred ------EEEEeCCcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEEC--------CEEEEEECCcce
Confidence 7899987764321 111111001122333 3 44 8999977 457899987765
No 306
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=77.79 E-value=19 Score=34.34 Aligned_cols=135 Identities=14% Similarity=0.177 Sum_probs=72.1
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCC----------ceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCc
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTN----------QWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMT 196 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~----------~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 196 (373)
++.+|+|-|. .+|+++.... .|..++ ...-++... ++++|+|-|..
T Consensus 453 rg~~yfFKg~---------~yWr~~~~~~~~~~P~~Is~~wp~LP-----~~IDAA~~~~~~~k~yFFkG~~-------- 510 (631)
T 1ck7_A 453 RGEIFFFKDR---------FIWRTVTPRDKPMGPLLVATFWPELP-----EKIDAVYEAPQEEKAVFFAGNE-------- 510 (631)
T ss_dssp SSSEEEECSS---------EEEEESCTTSCCEEEEEGGGTCTTSC-----SSCSBCCEETTTTEEEEEETTE--------
T ss_pred CCcEEEEcCC---------EEEEEcCCCCCCCCceeccccCCCCC-----ccceEEEEECCCCEEEEEecCE--------
Confidence 8899999764 5777765442 233322 111122222 57899997753
Q ss_pred eEEEEeCCCC--eE-EeccC--CccccccccEEE---ECCEEEEEeCccCCCccCCceEEEeCCCCceee-----ccc--
Q 017349 197 AVECYDPESD--TW-TTAAK--LRMGLARYDSAV---MGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-----MSD-- 261 (373)
Q Consensus 197 ~~~~yd~~t~--~W-~~~~~--~~~~~~~~~~~~---~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-----~~~-- 261 (373)
.++|+..+. .+ +.+.. +|.....--+|. .++++|+|-| +..++||..+++=.. +..
T Consensus 511 -yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG--------~~ywryd~~~~~vd~gYPk~i~~~w 581 (631)
T 1ck7_A 511 -YWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG--------DKFWRYNEVKKKMDPGFPKLIADAW 581 (631)
T ss_dssp -EEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET--------TEEEEEETTTTEECTTCCEETTTSC
T ss_pred -EEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC--------CEEEEEcCCcccccCCCCcchHhhc
Confidence 788875321 11 12221 121111112232 3689999987 468899987653221 110
Q ss_pred -CccCCcceEEEEEC--CeEEEEeeCCCcceEEEeCCCCc
Q 017349 262 -GMKEGWTGISIVLE--GKLFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 262 -~~~~~~~~~~~~~~--~~l~v~gg~~~~~~~~yd~~~~~ 298 (373)
..+. ...++...+ |++|.+-|. ..|+||..+..
T Consensus 582 ~G~p~-~iDAAf~~~~~g~~YFFkG~---~Ywr~d~~~~~ 617 (631)
T 1ck7_A 582 NAIPD-NLDAVVDLQGGGHSYFFKGA---YYLKLENQSLK 617 (631)
T ss_dssp SSCCT-TCCEEECCTTSCBCEEEETT---EEECCBTTBTT
T ss_pred CCCCC-CCcEeEEEcCCCeEEEEECC---EEEEEeCccce
Confidence 0111 122233333 899999876 78899886553
No 307
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=77.41 E-value=35 Score=29.61 Aligned_cols=237 Identities=13% Similarity=0.148 Sum_probs=115.5
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCC---CCCCCCceEEEEe--ccCCEEEEEcCc----c--CCCCCC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCP---KAVCPQAFACTSL--PRQGKLFVLGGM----R--SDTETP 145 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~---~~~~~~~~~~~~~--~~~~~i~v~GG~----~--~~~~~~ 145 (373)
...+|+-. -....+..+|+..+.-..+ .++.. -....+..+.... -.+++|+++.-. . +.....
T Consensus 24 ~g~~~vs~----l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 24 RQVFYQSN----LYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp TTEEEEEE----TTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSS
T ss_pred CCEEEEEe----ccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCC
Confidence 45666642 2234588899987765554 33310 0001122455552 136888886211 0 011123
Q ss_pred cceeEEEeCC---CCc--eec-cCCCCCc-------cee-e-eeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCe--
Q 017349 146 MQSTIMYRAT---TNQ--WQL-ASPMLTP-------RSF-F-ASGN-VNGKIMAVGGTGANINETMTAVECYDPESDT-- 207 (373)
Q Consensus 146 ~~~~~~yd~~---t~~--W~~-~~~~~~~-------r~~-~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-- 207 (373)
...+.+||+. +++ |.. ++..... +.. . -+++ -++.+||.+... ...++++++....
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~------~~~I~rV~pdG~~~~ 172 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG------MPAIARVSADGKTVS 172 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES------SCEEEEECTTSCCEE
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC------CCeEEEEeCCCCEEe
Confidence 4679999988 553 432 2211111 111 1 1222 268999975542 1458889887652
Q ss_pred -EEeccCCccccccccE-EEE-CCE-EEEEeCccCCCccCCceEEEeCCCCceeecccC------ccCCcce-EEEEECC
Q 017349 208 -WTTAAKLRMGLARYDS-AVM-GSK-MYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDG------MKEGWTG-ISIVLEG 276 (373)
Q Consensus 208 -W~~~~~~~~~~~~~~~-~~~-~~~-lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~------~~~~~~~-~~~~~~~ 276 (373)
|-.-.+....+.+... +.. +|. |++..+ . ..+++||+.+....+++.. ......+ ...-.+|
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~------g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G 245 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P------RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGN 245 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S------SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETT
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcC-C------CeEEEEcCCCCcceeecccccCCcccccCcccccccccCC
Confidence 5332222233444443 444 454 555443 3 6799999985432122210 0011122 2244799
Q ss_pred eEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcc-cccceEEE-E----eCCEEEEEeCCce
Q 017349 277 KLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEV-MHRPFAVN-G----VEGKIYVVSSGLN 333 (373)
Q Consensus 277 ~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~-~----~~~~l~i~GG~~~ 333 (373)
+++++.......+...+. .+ |........-+.. ....++.+ . .+++||++.+...
T Consensus 246 ~vllV~~~~~~~~~l~S~-Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f~ 306 (334)
T 2p9w_A 246 ESVLVGARAPYAISFRSW-DN-WKSANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFFD 306 (334)
T ss_dssp EEEEEEEETTEEEEEECS-ST-TSEEEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCGG
T ss_pred EEEEEEcCCCCEEEEECC-CC-cceeEEeeeecCccccCceeEEEEeccccCCeEEEEeeecC
Confidence 986655432333334443 33 8875442211111 12344443 3 5789999998754
No 308
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=76.22 E-value=45 Score=32.00 Aligned_cols=108 Identities=6% Similarity=-0.116 Sum_probs=52.6
Q ss_pred eEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCC--CCCcceeEEEeCCCCceeccCCCCCcc-
Q 017349 93 QWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDT--ETPMQSTIMYRATTNQWQLASPMLTPR- 169 (373)
Q Consensus 93 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~--~~~~~~~~~yd~~t~~W~~~~~~~~~r- 169 (373)
.+..+|+.+.+-..+...... .........++.+++.++++...... ......++++|..+++-+.+.......
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~---~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~ 114 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKI---ESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNA 114 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTT---TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSC
T ss_pred CEEEEECCCCcEEEEeccccc---cccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccc
Confidence 577888887765443222100 00012334444466655555332111 112368999999988765554332111
Q ss_pred -eeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec
Q 017349 170 -SFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTA 211 (373)
Q Consensus 170 -~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 211 (373)
.......-+++.++++.. ..++++|..+++-+.+
T Consensus 115 ~~~~~~~SPdG~~la~~~~--------~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 115 KLQYAGWGPKGQQLIFIFE--------NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp CCSBCCBCSSTTCEEEEET--------TEEEEESSSSSCCEEE
T ss_pred cccccEECCCCCEEEEEEC--------CeEEEEECCCCceEEE
Confidence 111111224443333322 2578888877665544
No 309
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=75.49 E-value=63 Score=31.52 Aligned_cols=178 Identities=9% Similarity=0.060 Sum_probs=83.9
Q ss_pred EEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEecc-CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceee
Q 017349 94 WQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPR-QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFF 172 (373)
Q Consensus 94 ~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~ 172 (373)
+..-+-.-.+|..+...|... ......++... .+.+|+.+.. .+++-.-.-++|+.+..++......
T Consensus 504 i~~S~DgG~tW~~~~~~p~~~---~~~~~i~~~~~~~~~~~a~~~~---------~v~~S~D~G~tW~~~~~~~~~~~i~ 571 (737)
T 2cn3_A 504 ISFSYDGGRNWFQPPNEAPNS---VGGGSVAVAADAKSVIWTPENA---------SPAVTTDNGNSWKVCTNLGMGAVVA 571 (737)
T ss_dssp EEEESSTTSSCBCCSCCCSCS---SCCSEEEECTTSSCEEEECTTS---------CCEEESSTTSSCEECBTCCTTCEEE
T ss_pred EEEeCCCCCCCcccccCCccc---cCCceEEEEeCCCCEEEEeCCC---------eEEEECCCCCCCccCCCCCCCceEE
Confidence 333333457898864444211 01112222222 2345554321 2444333345899887554332111
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEecc--CCccccccccEEEE---CCEEEEEeCccCCCccCCceE
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAA--KLRMGLARYDSAVM---GSKMYVTEGWTWPFMFSPRGG 247 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~---~~~lyv~gG~~~~~~~~~~i~ 247 (373)
....-.+.+|+.+ .. .+++=.-.-.+|+.+. .+|. ........ ++.+|+.+.. ..++
T Consensus 572 ~~~~~~~~~~a~~-~g--------~v~~S~DgG~tW~~~~~~~~p~--~~~~i~~~~~~~g~l~~~~~~-------g~l~ 633 (737)
T 2cn3_A 572 SDRVNGKKFYAFY-NG--------KFYISTDGGLTFTDTKAPQLPK--SVNKIKAVPGKEGHVWLAARE-------GGLW 633 (737)
T ss_dssp ECSSCTTCEEEEE-TT--------EEEEESSTTSBCEECCCSSCCS--CCSEEEEETTEEEEEEEECBT-------TCEE
T ss_pred EEecCCCEEEEec-CC--------EEEEECCCCcCcccccCCCCCC--ccceEEEEeCCCCEEEEEeCC-------CcEE
Confidence 0011245677664 21 2333222345799864 3443 22223333 4678877643 2456
Q ss_pred EEeCCCCceeecccCccCCcceEEE--E-EC---CeEEEEeeCC-CcceEEEeCCCCceeeec
Q 017349 248 VYDINKDTWNLMSDGMKEGWTGISI--V-LE---GKLFVISEHG-DCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 248 ~yd~~~~~W~~~~~~~~~~~~~~~~--~-~~---~~l~v~gg~~-~~~~~~yd~~~~~W~~~~ 303 (373)
+-+-.-.+|+.+.. +.... ...+ . -+ +.||++|..+ ...+++-+-.-.+|+.+.
T Consensus 634 ~S~D~G~tW~~~~~-~~~~~-~~~~~~~~~~~~~~~l~~~g~~g~~~gl~~S~D~G~tW~~~~ 694 (737)
T 2cn3_A 634 RSTDGGYTFEKLSN-VDTAH-VVGFGKAAPGQDYMAIYITGKIDNVLGFFRSDDAGKTWVRIN 694 (737)
T ss_dssp EESSTTSSCEECTT-CSEEE-EEEEECCCTTCSSCEEEEEEEETTEEEEEEESSTTSSCEECS
T ss_pred EEeCCCcccEECcC-CCccc-eEEEeecCCCCCCcEEEEEEecCCcceEEEeCCCCCCCEecc
Confidence 55555578999864 22211 1111 1 12 2688886432 122555444456899986
No 310
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=73.77 E-value=68 Score=31.11 Aligned_cols=142 Identities=13% Similarity=0.126 Sum_probs=68.1
Q ss_pred ceEEEEeCCC---C---eEEeccCCc----ccccccc-EEEECCEEEEEeCccCCCccCCceEEEeCCCCc--eeeccc-
Q 017349 196 TAVECYDPES---D---TWTTAAKLR----MGLARYD-SAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLMSD- 261 (373)
Q Consensus 196 ~~~~~yd~~t---~---~W~~~~~~~----~~~~~~~-~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~~~- 261 (373)
..++++|..+ + +...+.... ....-.. +..-+|+++++.-.. ......+..+|..+++ |.....
T Consensus 228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r--~~~~~~i~~~d~~tg~~~~~~~~~~ 305 (740)
T 4a5s_A 228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRR--IQNYSVMDICDYDESSGRWNCLVAR 305 (740)
T ss_dssp EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEES--STTEEEEEEEEEETTTTEEEECGGG
T ss_pred eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCC--CCCEEEEEEEECCCCccccceeEEE
Confidence 3688899998 7 666654211 1111111 223378855543221 1112368889988776 321111
Q ss_pred ----CccCCcc------eEEEEECCeEEE-EeeC--CCcceEEEeCCCCceeeecCCCCCCcccccceEEE-EeCCEEEE
Q 017349 262 ----GMKEGWT------GISIVLEGKLFV-ISEH--GDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVN-GVEGKIYV 327 (373)
Q Consensus 262 ----~~~~~~~------~~~~~~~~~l~v-~gg~--~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~l~i 327 (373)
.....+. .....-+|+.++ +... +...++.||.+++.-..+...... ..... ..++.||.
T Consensus 306 ~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~~~------v~~~~~~d~~~i~f 379 (740)
T 4a5s_A 306 QHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWE------VIGIEALTSDYLYY 379 (740)
T ss_dssp CEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSSSC------EEEEEEECSSEEEE
T ss_pred EeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCCEE------EEEEEEEeCCEEEE
Confidence 0011111 111223555333 4332 246899999987766655432111 11122 22667777
Q ss_pred EeCC--ceeeeeEEEEeecC
Q 017349 328 VSSG--LNVAIGRVYEEQNG 345 (373)
Q Consensus 328 ~GG~--~~~~~~~~~~~~~d 345 (373)
.+.. .+.....+|....+
T Consensus 380 ~~~~~~~~~~~~~ly~v~~~ 399 (740)
T 4a5s_A 380 ISNEYKGMPGGRNLYKIQLI 399 (740)
T ss_dssp EESCGGGCTTCBEEEEEETT
T ss_pred EEecCCCCCceeEEEEEECC
Confidence 7765 33444556654333
No 311
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=72.51 E-value=50 Score=29.07 Aligned_cols=105 Identities=10% Similarity=0.021 Sum_probs=59.5
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEeCCCCc--e-eccCCCCCcc---eeeeeeEe--CCeEEEEcCCCCCCCCcCceEE
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYRATTNQ--W-QLASPMLTPR---SFFASGNV--NGKIMAVGGTGANINETMTAVE 199 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~--W-~~~~~~~~~r---~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 199 (373)
.++++|+|-|. .+|+|+..... + +.+..+..|. .--++... ++++|+|-|. ..+
T Consensus 235 ~~g~~~fFkg~---------~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~---------~yw 296 (365)
T 3ba0_A 235 ARNQVFLFKDD---------KYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN---------QYW 296 (365)
T ss_dssp GGTEEEEEETT---------EEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT---------EEE
T ss_pred CCCEEEEEeCC---------EEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC---------EEE
Confidence 37999999764 67888754321 1 1222221121 22233333 5799999775 388
Q ss_pred EEeCCCCeEEe-----ccC-Ccc-ccccccEEEE-CCEEEEEeCccCCCccCCceEEEeCCCCceee
Q 017349 200 CYDPESDTWTT-----AAK-LRM-GLARYDSAVM-GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL 258 (373)
Q Consensus 200 ~yd~~t~~W~~-----~~~-~~~-~~~~~~~~~~-~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~ 258 (373)
+||..+++-.. +.. .|. +..-.++... ++++|+|-| +..++||..+.+-..
T Consensus 297 ~yd~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg--------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 297 RYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG--------SNQFEYDFLLQRITK 355 (365)
T ss_dssp EEETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET--------TEEEEEETTTTEEEE
T ss_pred EEeCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC--------CEEEEEECCccEEec
Confidence 99987764321 100 111 1112234444 889999977 458899998776544
No 312
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=72.01 E-value=52 Score=29.03 Aligned_cols=65 Identities=12% Similarity=0.154 Sum_probs=35.5
Q ss_pred CCEEEEEeCccCCCccCCceEEEeCCCC--ceeeccc-C--ccCCcc-eEEEEE--CC-eEEEEeeCCCcceEEEeCCCC
Q 017349 227 GSKMYVTEGWTWPFMFSPRGGVYDINKD--TWNLMSD-G--MKEGWT-GISIVL--EG-KLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 227 ~~~lyv~gG~~~~~~~~~~i~~yd~~~~--~W~~~~~-~--~~~~~~-~~~~~~--~~-~l~v~gg~~~~~~~~yd~~~~ 297 (373)
++++++.| .+ ..+.+||+.+. .+..+.. + ...... -.++.+ ++ ++++.|+. ...+..||..+.
T Consensus 188 ~~~~l~s~-~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~ 259 (447)
T 3dw8_B 188 DYETYLSA-DD------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS-KGTIRLCDMRAS 259 (447)
T ss_dssp TSSEEEEE-CS------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET-TSCEEEEETTTC
T ss_pred CCCEEEEe-CC------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC-CCeEEEEECcCC
Confidence 56666665 44 57889999833 2332211 0 111111 112333 34 67777765 568999999876
Q ss_pred ce
Q 017349 298 TW 299 (373)
Q Consensus 298 ~W 299 (373)
+-
T Consensus 260 ~~ 261 (447)
T 3dw8_B 260 AL 261 (447)
T ss_dssp SS
T ss_pred cc
Confidence 64
No 313
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=71.23 E-value=54 Score=28.91 Aligned_cols=28 Identities=0% Similarity=0.026 Sum_probs=19.4
Q ss_pred CCeEEEEeeCCCcceEEEeCCCCceeeec
Q 017349 275 EGKLFVISEHGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 275 ~~~l~v~gg~~~~~~~~yd~~~~~W~~~~ 303 (373)
+++.++.|+. ...+.+||..+++-..+.
T Consensus 353 ~~~~l~s~s~-dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 353 SDSVVMTGSY-NNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp TSSEEEEECS-TTEEEEEETTTCCEEEEE
T ss_pred CCCEEEEecc-CCEEEEEEcCCCcceeee
Confidence 5666666654 678999999887665543
No 314
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=71.02 E-value=42 Score=31.78 Aligned_cols=212 Identities=13% Similarity=0.108 Sum_probs=107.9
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEe--ccCCEEEEEcCccC----CC------CC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSL--PRQGKLFVLGGMRS----DT------ET 144 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~GG~~~----~~------~~ 144 (373)
+.++|+. .....++.+.|+.+.+-..+-.+|... .-++.+.. ..+++||+.+.... ++ ..
T Consensus 101 G~~lfVn----d~~~~rVavIdl~t~~~~~ii~ip~g~----~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~ 172 (595)
T 1fwx_A 101 GRFLFMN----DKANTRVARVRCDVMKCDAILEIPNAK----GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVAN 172 (595)
T ss_dssp EEEEEEE----ETTTTEEEEEETTTTEEEEEEECSSCC----SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGG
T ss_pred CCEEEEE----cCCCCEEEEEECCCceEeeEEeCCCCC----CCcceeeeecCCCcEEEEecccccccCCCCcccccccc
Confidence 4567774 234556889999998766544555322 34566653 34788988864310 11 12
Q ss_pred CcceeEEEeCCCCc--eecc-CCCCCcceeeeeeE-eCCeEEEEcCCC------------------------------CC
Q 017349 145 PMQSTIMYRATTNQ--WQLA-SPMLTPRSFFASGN-VNGKIMAVGGTG------------------------------AN 190 (373)
Q Consensus 145 ~~~~~~~yd~~t~~--W~~~-~~~~~~r~~~~~~~-~~~~iyv~GG~~------------------------------~~ 190 (373)
..+.+-+.|..+++ |+-. +.- +. ...+. -+..+|+..-.+ .+
T Consensus 173 ~~~~vtvID~~t~~v~~qI~Vgg~--pd--~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~G 248 (595)
T 1fwx_A 173 YVNVFTAVDADKWEVAWQVLVSGN--LD--NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAG 248 (595)
T ss_dssp EEEEEEEEETTTTEEEEEEEESSC--CC--CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHT
T ss_pred cCceEEEEECCCCeEEEEEEeCCC--cc--ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCC
Confidence 34577889998873 4421 111 10 01111 122222222110 00
Q ss_pred CCCcCceEEEEeCCCCeEEe-ccCCccccccccEEEE-CCE-EEEEeCccCCCccCCceEEEeCCCCc-e---------e
Q 017349 191 INETMTAVECYDPESDTWTT-AAKLRMGLARYDSAVM-GSK-MYVTEGWTWPFMFSPRGGVYDINKDT-W---------N 257 (373)
Q Consensus 191 ~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~-~~~-lyv~gG~~~~~~~~~~i~~yd~~~~~-W---------~ 257 (373)
.....+.+-+.|..+.+.+. +..+|.+..-|.+.+. +|+ +|+.+... +.+.+||..+.+ + .
T Consensus 249 k~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s------~~VsVid~~~~~~~~~~~l~~~~~ 322 (595)
T 1fwx_A 249 DYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLS------PTVTVLDVTRFDAVFYENADPRSA 322 (595)
T ss_dssp CSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTS------SBEEEEEGGGHHHHHHSCCCGGGG
T ss_pred CeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCC------CeEEEEECcccccccccccCcccc
Confidence 11123457788888743333 3345555555666555 565 55555443 789999998653 1 0
Q ss_pred eccc-CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCC--------CceeeecCCCC
Q 017349 258 LMSD-GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDD--------DTWRYVGGDKF 307 (373)
Q Consensus 258 ~~~~-~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~--------~~W~~~~~~~~ 307 (373)
.+.. +...+-.+.+..-+|.+|+.-.. ...+.+||.++ +.+..+..++.
T Consensus 323 v~~~v~vG~gP~h~aF~~dG~aY~t~~l-dsqV~kwdi~~a~~~~~g~~~~~vi~kidV 380 (595)
T 1fwx_A 323 VVAEPELGLGPLHTAFDGRGNAYTSLFL-DSQVVKWNIEDAIRAYAGEKVDPIKDKLDV 380 (595)
T ss_dssp EEECCBCCSCEEEEEECTTSEEEEEETT-TTEEEEEEHHHHHHHHHTCSCCCEEEEEEC
T ss_pred eEEEcCCCCCcceEEECCCCeEEEEEec-CCcEEEEEhhHhhhhhcccccceeEEEeec
Confidence 1111 11111111122225688887654 45777788765 33566655443
No 315
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=70.99 E-value=62 Score=29.50 Aligned_cols=70 Identities=7% Similarity=-0.087 Sum_probs=38.2
Q ss_pred CCeEEEEcCCCCCCCCcCceEEEEeCCCC----eEEecc---CC--cccc-ccccEEEE-CCEEEEEeCccCCCccCCce
Q 017349 178 NGKIMAVGGTGANINETMTAVECYDPESD----TWTTAA---KL--RMGL-ARYDSAVM-GSKMYVTEGWTWPFMFSPRG 246 (373)
Q Consensus 178 ~~~iyv~GG~~~~~~~~~~~~~~yd~~t~----~W~~~~---~~--~~~~-~~~~~~~~-~~~lyv~gG~~~~~~~~~~i 246 (373)
..++|+-|..+ +.++++|..++ +-.+.- .+ +... .-|...+. +| ||+..-.+..+.....+
T Consensus 95 r~~l~v~~l~s-------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 95 RRFLIVPGLRS-------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp SCEEEEEBTTT-------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred CCEEEEccCCC-------CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 34566655543 67999999877 332221 11 1111 12333333 55 88753222233445789
Q ss_pred EEEeCCCCc
Q 017349 247 GVYDINKDT 255 (373)
Q Consensus 247 ~~yd~~~~~ 255 (373)
..+|.++.+
T Consensus 167 ~vlD~~T~~ 175 (462)
T 2ece_A 167 LMLDHYSFE 175 (462)
T ss_dssp EEECTTTCC
T ss_pred EEEECCCCe
Confidence 999999765
No 316
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=70.40 E-value=56 Score=28.70 Aligned_cols=72 Identities=10% Similarity=0.032 Sum_probs=41.3
Q ss_pred CCEEEEEeCccCC---CccCCceEEEeCCCCce-eecccCccCCcceEEEEECCe-EEEEeeCCCcceEEEeCCCCcee
Q 017349 227 GSKMYVTEGWTWP---FMFSPRGGVYDINKDTW-NLMSDGMKEGWTGISIVLEGK-LFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 227 ~~~lyv~gG~~~~---~~~~~~i~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~-l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
++++|+....... ....+.+.++|+++++= ..++ .+..-.+....-+|+ ++++.....+.+.+||..+.+-.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~--~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS--LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE--CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 4678987542111 11236799999988764 3332 222223333444666 45554434679999998765433
No 317
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=69.38 E-value=64 Score=28.96 Aligned_cols=59 Identities=12% Similarity=-0.027 Sum_probs=33.7
Q ss_pred CeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCC
Q 017349 179 GKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDIN 252 (373)
Q Consensus 179 ~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~ 252 (373)
+.+++.|+.+ ..+.+||..++.-.. .... .......+.. +|+.++.|+.+ ..+.+||+.
T Consensus 162 ~~~las~s~D-------g~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~d------g~v~iwd~~ 222 (434)
T 2oit_A 162 PSMVAVCLAD-------GSIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQN------GTVVQYLPT 222 (434)
T ss_dssp TTEEEEEETT-------SCEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETT------SCEEEECTT
T ss_pred CCEEEEEECC-------CeEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCC------CcEEEEccC
Confidence 5677777665 358889988773211 1111 1111122222 67777777765 578999987
No 318
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=67.86 E-value=47 Score=26.80 Aligned_cols=132 Identities=13% Similarity=0.173 Sum_probs=68.8
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCe-E--Eec----cCCccccccccEEEE---CCEEEEEeCccCCCcc
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESDT-W--TTA----AKLRMGLARYDSAVM---GSKMYVTEGWTWPFMF 242 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~-W--~~~----~~~~~~~~~~~~~~~---~~~lyv~gG~~~~~~~ 242 (373)
+++...+++|+|-|.. .++++..... . +.+ +.+|. .--|+.. ++++|+|-|
T Consensus 35 Ai~~~~g~~~fFkg~~---------~Wr~~~~~~~~~~P~~I~~~wp~lp~---~IDAA~~~~~~~k~yfFkG------- 95 (218)
T 1gen_A 35 GIAQIRGEIFFFKDRF---------IWRTVTPRDKPMGPLLVATFWPELPE---KIDAVYEAPQEEKAVFFAG------- 95 (218)
T ss_dssp EEEEETTEEEEEETTE---------EEEESSTTSCCEEEEEGGGTCTTSCS---CCSEEEEETTTTEEEEEET-------
T ss_pred EEEeCCCcEEEEECCE---------EEEEeCCCCccCCCEEHHHhcCCCCC---CccEEEEECCCCEEEEEeC-------
Confidence 4455788999997753 4555443311 1 112 12332 1223332 689999977
Q ss_pred CCceEEEeCCCCc--e-eeccc-CccC--CcceEEEE--ECCeEEEEeeCCCcceEEEeCCCCceee-----ecC--CCC
Q 017349 243 SPRGGVYDINKDT--W-NLMSD-GMKE--GWTGISIV--LEGKLFVISEHGDCPMKQYNPDDDTWRY-----VGG--DKF 307 (373)
Q Consensus 243 ~~~i~~yd~~~~~--W-~~~~~-~~~~--~~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~~~W~~-----~~~--~~~ 307 (373)
+..++||..+-. + +.+.. ..+. ....++.. .++++|++-|. ..|+||..+++-.. +.. +..
T Consensus 96 -~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~---~ywr~d~~~~~v~~gyPr~i~~~w~g~ 171 (218)
T 1gen_A 96 -NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD---KFWRYNEVKKKMDPGFPKLIADAWNAI 171 (218)
T ss_dssp -TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT---EEEEEETTTTEECSSCCEEHHHHSSSC
T ss_pred -CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC---EEEEEECccccccCCCCcchhhccCCC
Confidence 457888853110 0 01111 1111 12233333 36899999875 89999987663221 110 122
Q ss_pred CCcccccceEEEEeC--CEEEEEeCC
Q 017349 308 PCEVMHRPFAVNGVE--GKIYVVSSG 331 (373)
Q Consensus 308 ~~~~~~~~~~~~~~~--~~l~i~GG~ 331 (373)
| ...-++...+ +++|++-|.
T Consensus 172 p----~~idaAf~~~~~g~~YfFkg~ 193 (218)
T 1gen_A 172 P----DNLDAVVDLQGGGHSYFFKGA 193 (218)
T ss_dssp C----SSCSEEEECTTTCEEEEEETT
T ss_pred C----CCCCEEEEEcCCCcEEEEECC
Confidence 3 2223444444 899999885
No 319
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=66.00 E-value=1.1e+02 Score=30.55 Aligned_cols=149 Identities=11% Similarity=0.003 Sum_probs=71.5
Q ss_pred EeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCC
Q 017349 125 SLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPE 204 (373)
Q Consensus 125 ~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~ 204 (373)
.+..++.+++.|+.+ ..+.+||..+..-... +.....-..++...+++++.++.+ ..+.++|..
T Consensus 24 afspdg~~lAsgs~D-------g~I~lw~~~~~~~~~~--~~~~~~V~~l~fspg~~L~S~s~D-------~~v~lWd~~ 87 (902)
T 2oaj_A 24 AFDFTQNLLAIATVT-------GEVHIYGQQQVEVVIK--LEDRSAIKEMRFVKGIYLVVINAK-------DTVYVLSLY 87 (902)
T ss_dssp EEETTTTEEEEEETT-------SEEEEECSTTCEEEEE--CSSCCCEEEEEEETTTEEEEEETT-------CEEEEEETT
T ss_pred EECCCCCEEEEEeCC-------CEEEEEeCCCcEEEEE--cCCCCCEEEEEEcCCCEEEEEECc-------CeEEEEECC
Confidence 333456666666652 2577777655432211 111111223333335544445443 468899988
Q ss_pred CCeEEeccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCceeeccc--------Ccc--CCcceEEE
Q 017349 205 SDTWTTAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSD--------GMK--EGWTGISI 272 (373)
Q Consensus 205 t~~W~~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~--------~~~--~~~~~~~~ 272 (373)
+.+-... +... ....++.+ ++..++.|+.+ ..+..||..++.-..... .+. .......+
T Consensus 88 ~~~~~~~--~~~~-~~V~~v~~sp~g~~l~sgs~d------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~ 158 (902)
T 2oaj_A 88 SQKVLTT--VFVP-GKITSIDTDASLDWMLIGLQN------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQ 158 (902)
T ss_dssp TCSEEEE--EECS-SCEEEEECCTTCSEEEEEETT------SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEE
T ss_pred CCcEEEE--EcCC-CCEEEEEECCCCCEEEEEcCC------CcEEEEECCCCccccceeccccccccccccCCCCeEEEE
Confidence 7653211 1111 11112222 56666666655 578999998775321100 000 01111112
Q ss_pred EE--CCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 273 VL--EGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 273 ~~--~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
.. ++.++++|+. ...+ .||..+++-.
T Consensus 159 ~sp~~~~~l~~g~~-dg~v-lWd~~~~~~~ 186 (902)
T 2oaj_A 159 WNPRDIGTVLISYE-YVTL-TYSLVENEIK 186 (902)
T ss_dssp EETTEEEEEEEECS-SCEE-EEETTTTEEE
T ss_pred EccCCCCEEEEEeC-CCcE-EEECCCCceE
Confidence 22 2345556554 5567 9999877543
No 320
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=65.42 E-value=72 Score=28.07 Aligned_cols=193 Identities=6% Similarity=-0.137 Sum_probs=91.8
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCC--CCCcceeEEEeC
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDT--ETPMQSTIMYRA 154 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~--~~~~~~~~~yd~ 154 (373)
...+|+.......-..++.++|+.+++-. ..++... .. +.+....++++|+........ ....+.+.++|+
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v~--~~i~vG~----~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~ 103 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVTL--GHSLGAF----LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDP 103 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEE--EEEEECT----TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECT
T ss_pred CCeEEEECCccCCccceEEEEECCCCeEE--EEEeCCC----CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 46788876533322227889999887544 3444332 22 444444467899885211000 023568999999
Q ss_pred CCCceeccCCCC-Ccc-----eeeeeeE--eCCeEEEEcCCCCCCCCcCceEEE--EeCCCCeEEeccCCccccccccEE
Q 017349 155 TTNQWQLASPML-TPR-----SFFASGN--VNGKIMAVGGTGANINETMTAVEC--YDPESDTWTTAAKLRMGLARYDSA 224 (373)
Q Consensus 155 ~t~~W~~~~~~~-~~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~--yd~~t~~W~~~~~~~~~~~~~~~~ 224 (373)
.+++=..-=+++ .+| ..+.+++ -+..+|+.--. ..+.+.+ .|+.+ -+.+ +.+...+ ..
T Consensus 104 ~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~------~~~~v~V~~iD~~t--v~~i---~v~~~~~-~~ 171 (368)
T 1mda_H 104 VTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG------SSAAAGLSVPGASD--DQLT---KSASCFH-IH 171 (368)
T ss_dssp TTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS------SSCEEEEEETTTEE--EEEE---ECSSCCC-CE
T ss_pred CCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC------CCCeEEEEEEchhh--ceEE---ECCCceE-Ec
Confidence 998633211111 111 1223333 34577876311 1234666 77777 2223 2221111 22
Q ss_pred EECCEEEEEeCccCCCccCCceEEEeCCC-----Cceeecc-cCccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCC
Q 017349 225 VMGSKMYVTEGWTWPFMFSPRGGVYDINK-----DTWNLMS-DGMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 225 ~~~~~lyv~gG~~~~~~~~~~i~~yd~~~-----~~W~~~~-~~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
..+.+.|+....+ ..+..+|.++ +++.... ...+.+.......-++++|++.- +.+.+.|...+
T Consensus 172 p~g~~~~~~~~~d------g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~---~~V~viD~~~~ 241 (368)
T 1mda_H 172 PGAAATHYLGSCP------ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA---SSILQGDIPAA 241 (368)
T ss_dssp EEETTEEECCCCT------TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS---SCCEEEECCSS
T ss_pred cCCCeEEEEEcCC------CCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC---CEEEEEECCCC
Confidence 2344455533222 3566778876 3332100 00111111111222455665543 58888888654
No 321
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=63.75 E-value=1e+02 Score=29.18 Aligned_cols=180 Identities=5% Similarity=-0.049 Sum_probs=92.2
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccC-CCCC-cceeeeeeE-eCCeEEEEcCCCCCCCCcCce
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLAS-PMLT-PRSFFASGN-VNGKIMAVGGTGANINETMTA 197 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~-~~~~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 197 (373)
..++..+.+|..+..++.++ .+.+||..+ .+..+. .++. .+..++++. -++++.+.||.+ ..
T Consensus 88 V~~vawSPdG~~LAs~s~dg-------~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D-------Gt 152 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNG-------NVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED-------GE 152 (588)
T ss_dssp EEEEEECSSSSCEEEEETTS-------CEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT-------SE
T ss_pred EEEEEECCCCCEEEEEeCCC-------cEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC-------CE
Confidence 34445555788777776522 577888433 333332 2221 233444444 367777788775 46
Q ss_pred EEEEeCCCCeE-----EeccCCcccc-----ccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCc----eeecccCc
Q 017349 198 VECYDPESDTW-----TTAAKLRMGL-----ARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDT----WNLMSDGM 263 (373)
Q Consensus 198 ~~~yd~~t~~W-----~~~~~~~~~~-----~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~----W~~~~~~~ 263 (373)
+.+||..++.- -.+..+.... .-...+...+. ++.++.+ +.+..+|..++. |+.+.. .
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D------~tVrlWd~~~~~~~~~~~tL~~-~ 224 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSN------NSVFSMTVSASSHQPVSRMIQN-A 224 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETT------CCEEEECCCSSSSCCCEEEEEC-C
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCC------CeEEEEECCCCccccceeeecc-c
Confidence 88999888631 1112221111 11223344444 5666655 688999998776 223321 1
Q ss_pred cCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEE---eCCEEEEEeCC
Q 017349 264 KEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNG---VEGKIYVVSSG 331 (373)
Q Consensus 264 ~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~---~~~~l~i~GG~ 331 (373)
........+..+ ..++.++. ..+..||..+++-..... ... .....++. -++..+++++.
T Consensus 225 h~~~V~svaFsg-~~LASa~~--~tIkLWd~~~~~~~~~~~-gh~----~~V~~va~~~s~d~~~La~a~e 287 (588)
T 2j04_A 225 SRRKITDLKIVD-YKVVLTCP--GYVHKIDLKNYSISSLKT-GSL----ENFHIIPLNHEKESTILLMSNK 287 (588)
T ss_dssp CSSCCCCEEEET-TEEEEECS--SEEEEEETTTTEEEEEEC-SCC----SCCCEEEETTCSSCEEEEECSS
T ss_pred ccCcEEEEEEEC-CEEEEEeC--CeEEEEECCCCeEEEEEc-CCC----ceEEEEEeeeCCCCCEEEEEcC
Confidence 111111222224 55555543 599999998876644432 222 12222332 34566777664
No 322
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=63.45 E-value=1e+02 Score=29.14 Aligned_cols=113 Identities=8% Similarity=-0.014 Sum_probs=61.9
Q ss_pred eEEEEeccCCEEEEEcCccCCCCCCcceeEEEeCCCCce-----eccCCCC-----CcceeeeeeEeCCeEEEEcCCCCC
Q 017349 121 FACTSLPRQGKLFVLGGMRSDTETPMQSTIMYRATTNQW-----QLASPML-----TPRSFFASGNVNGKIMAVGGTGAN 190 (373)
Q Consensus 121 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W-----~~~~~~~-----~~r~~~~~~~~~~~iyv~GG~~~~ 190 (373)
..+.+...+++.++.||.+ + .+.+||..++.- ..+..+. ....-..++...+. ++.++.+
T Consensus 132 v~svafSPDG~~LAsgs~D--G-----tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D-- 201 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNED--G-----ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSN-- 201 (588)
T ss_dssp EEEEEECSSSSCEEEEETT--S-----EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETT--
T ss_pred EEEEEEcCCCCEEEEEcCC--C-----EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCC--
Confidence 4455556688888888763 2 688999888742 1112211 11122333444444 6666654
Q ss_pred CCCcCceEEEEeCCCCe----EEeccCCccccc-cccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceee
Q 017349 191 INETMTAVECYDPESDT----WTTAAKLRMGLA-RYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL 258 (373)
Q Consensus 191 ~~~~~~~~~~yd~~t~~----W~~~~~~~~~~~-~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~ 258 (373)
+.+..+|..++. |+.+.. ..+. -.+++..+ ...+.++ + ..+..||..++.-..
T Consensus 202 -----~tVrlWd~~~~~~~~~~~tL~~--~h~~~V~svaFsg-~~LASa~-~------~tIkLWd~~~~~~~~ 259 (588)
T 2j04_A 202 -----NSVFSMTVSASSHQPVSRMIQN--ASRRKITDLKIVD-YKVVLTC-P------GYVHKIDLKNYSISS 259 (588)
T ss_dssp -----CCEEEECCCSSSSCCCEEEEEC--CCSSCCCCEEEET-TEEEEEC-S------SEEEEEETTTTEEEE
T ss_pred -----CeEEEEECCCCccccceeeecc--cccCcEEEEEEEC-CEEEEEe-C------CeEEEEECCCCeEEE
Confidence 468888887765 233321 1221 22333444 4444444 2 479999998877643
No 323
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=62.86 E-value=1.2e+02 Score=29.59 Aligned_cols=150 Identities=4% Similarity=-0.047 Sum_probs=77.5
Q ss_pred ceeEEEeCCC--CceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCC---CCcCceEEEEeCCC--------CeEEe-cc
Q 017349 147 QSTIMYRATT--NQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANI---NETMTAVECYDPES--------DTWTT-AA 212 (373)
Q Consensus 147 ~~~~~yd~~t--~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~~~yd~~t--------~~W~~-~~ 212 (373)
+.++..|... ..|.++. .++...-....++++|+....+... ......+...|..+ ..|+. ++
T Consensus 269 ~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKIN---MPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp EEEEEEECSSSSCEEEECC---SCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred eeEEEEcCCCCCCcceEee---cCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 4566666543 4566662 2222222355688999976442100 11345677887654 46886 33
Q ss_pred CCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecc-cCccC-CcceEE-EEE-CCeEEEEe-eCC-C
Q 017349 213 KLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMS-DGMKE-GWTGIS-IVL-EGKLFVIS-EHG-D 286 (373)
Q Consensus 213 ~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~-~~~~~-~~~~~~-~~~-~~~l~v~g-g~~-~ 286 (373)
+-. ...-......++.|++..-.+ ....+.++|+.++.|.... ...+. +..... ... ++.+++.. +.. .
T Consensus 346 ~~~-~~~l~~~~~~~~~l~~~~~~~----~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P 420 (711)
T 4hvt_A 346 PTA-NEVFNFISTTKDRVFLATYDN----VVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVP 420 (711)
T ss_dssp CCT-TEEEEEEEECSSCEEEEEEET----TEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSC
T ss_pred CCC-CCeEEEEEEECCEEEEEEEEC----CEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCC
Confidence 222 112122334466776654322 1246889999888885433 22332 221111 111 34454443 322 5
Q ss_pred cceEEEeCCCCceeeecCC
Q 017349 287 CPMKQYNPDDDTWRYVGGD 305 (373)
Q Consensus 287 ~~~~~yd~~~~~W~~~~~~ 305 (373)
..++.||.. ++++.+...
T Consensus 421 ~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 421 PTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp CEEEEECTT-SCEEEEECC
T ss_pred CEEEEEeCC-CcEEEEecC
Confidence 688899987 777777653
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=60.18 E-value=1.6e+02 Score=30.46 Aligned_cols=116 Identities=11% Similarity=0.078 Sum_probs=67.7
Q ss_pred CceEEEEeCCCCeEEeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEE-EE
Q 017349 195 MTAVECYDPESDTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGIS-IV 273 (373)
Q Consensus 195 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~-~~ 273 (373)
.-.+.+|+...++.+.+...+..-.-.+.+.++|+|.+.-| +.+.+||...++--......-....... .+
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig--------~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~ 934 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN--------STVRLYEWTTEKELRTECNHYNNIMALYLKT 934 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET--------TEEEEEEECTTSCEEEEEEECCCSCEEEEEE
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC--------CEEEEEECCCCceEEEEeeccccEEEEEEec
Confidence 45688888876677766554443344556677897766544 4688898876653221110000011111 24
Q ss_pred ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCCCCcccccceEEEEeC
Q 017349 274 LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVE 322 (373)
Q Consensus 274 ~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 322 (373)
.++.|++-.-..+-.+..|+...++...++.-..| +...++..++
T Consensus 935 ~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~----~~vta~~~ld 979 (1158)
T 3ei3_A 935 KGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNP----NWMSAVEILD 979 (1158)
T ss_dssp ETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSC----BCEEEEEEEE
T ss_pred cCCEEEEEEhhheEEEEEEEcCCCeEEEEEeeccc----ccEEEEEEEc
Confidence 57766654444456777899999999998864555 4444544443
No 325
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=59.56 E-value=1.1e+02 Score=28.24 Aligned_cols=155 Identities=9% Similarity=0.030 Sum_probs=81.4
Q ss_pred eEEEEec-cCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcc--eeeeeeE--------e-CCeEEEEcCCC
Q 017349 121 FACTSLP-RQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPR--SFFASGN--------V-NGKIMAVGGTG 188 (373)
Q Consensus 121 ~~~~~~~-~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r--~~~~~~~--------~-~~~iyv~GG~~ 188 (373)
.+.++.. .++.||++-.. ...+.+.|+.++.-+.+....... ....+++ - ++.||+..-..
T Consensus 142 ~~la~dp~~~~~Lyv~~~~-------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDG-------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp EEEEEETTEEEEEEEEEET-------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCC
T ss_pred CEEEEccCCCCEEEEEECC-------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCC
Confidence 3444443 25789998542 247999999999887764433211 1223333 2 34588874322
Q ss_pred CCCC-CcCceEEEEeCCC-CeEE------eccCCccccccccEEEE--CCEEEEEeCccCCCccCCceEEEeCC------
Q 017349 189 ANIN-ETMTAVECYDPES-DTWT------TAAKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDIN------ 252 (373)
Q Consensus 189 ~~~~-~~~~~~~~yd~~t-~~W~------~~~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~------ 252 (373)
.. .....+.+++... +.|. .++. -...+.+++. ++.||+.--.. ..+++||++
T Consensus 215 --~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~---~~~p~giavdp~~g~LYvtd~~~------g~V~r~d~~~~~~~~ 283 (496)
T 3kya_A 215 --GKGDESPSVYIIKRNADGTFDDRSDIQLIAA---YKQCNGATIHPINGELYFNSYEK------GQVFRLDLVDYFKTI 283 (496)
T ss_dssp --TTGGGEEEEEEEECCTTSCCSTTSCEEEEEE---ESCCCCEEECTTTCCEEEEETTT------TEEEEECHHHHHHHH
T ss_pred --CCcccCceEEEEecCCCCceeecccceeecc---CCCceEEEEcCCCCeEEEEECCC------CEEEEEecccccccc
Confidence 11 1234577887554 3553 2322 1222344444 46788876433 469999997
Q ss_pred -CCc-eeeccc----------CccC-Cc-ceEEEEECCe-EEEEeeCCCcceEEEeC
Q 017349 253 -KDT-WNLMSD----------GMKE-GW-TGISIVLEGK-LFVISEHGDCPMKQYNP 294 (373)
Q Consensus 253 -~~~-W~~~~~----------~~~~-~~-~~~~~~~~~~-l~v~gg~~~~~~~~yd~ 294 (373)
++. |+.... ..+. .+ .+.++.-+|+ ||+..- ....|+++|.
T Consensus 284 ~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~-~~h~I~kid~ 339 (496)
T 3kya_A 284 KNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVI-NNHYFMRSDY 339 (496)
T ss_dssp HTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEET-TTTEEEEEEE
T ss_pred cCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeC-CCCEEEEEec
Confidence 554 543211 0111 11 1222222455 788753 3668888554
No 326
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=58.77 E-value=1.4e+02 Score=29.13 Aligned_cols=149 Identities=10% Similarity=0.027 Sum_probs=75.6
Q ss_pred cceeEEEeCCCC--ce--eccCCCCCcceeeeee-EeCCeEEEEcCCCCCCCCcCceEEEEeCCC-CeEEe-ccCCcccc
Q 017349 146 MQSTIMYRATTN--QW--QLASPMLTPRSFFASG-NVNGKIMAVGGTGANINETMTAVECYDPES-DTWTT-AAKLRMGL 218 (373)
Q Consensus 146 ~~~~~~yd~~t~--~W--~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~-~~~~~~~~ 218 (373)
.+.++++|..+. .+ +.+.+-.. ...+... ..++.||+..-.+ ......++.+|..+ ..|+. +-+-....
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~---~a~~~~L~~~d~~~~~~~~~~li~~~~~~ 369 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEG---GAVNHKLLIAPRGQPSDWSHVLVDHSEDV 369 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTT---TCTTCEEEEEETTSTTCCCCEEECCCSSE
T ss_pred CceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCC---CCCCcEEEEEcCCCcccceeeEECCCCCc
Confidence 568999999875 45 44432111 1112222 2377888875432 12345788999876 67876 42211111
Q ss_pred ccccEEEECCEEEEEeCccCCCccCCceEEEeC-------CCCc-eeecccCccCCcceEEE------EEC-CeEEEE-e
Q 017349 219 ARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDI-------NKDT-WNLMSDGMKEGWTGISI------VLE-GKLFVI-S 282 (373)
Q Consensus 219 ~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~-------~~~~-W~~~~~~~~~~~~~~~~------~~~-~~l~v~-g 282 (373)
.-......++.|++....+ ....++++|+ .++. -+.+. .+........ ..+ +.+++. .
T Consensus 370 ~l~~~~~~~~~lv~~~~~~----g~~~l~~~dl~~~~~~~~~g~~~~~l~--l~~~~~~~~~~~~~~~~~~~~~l~~~~s 443 (751)
T 2xe4_A 370 FMESIAVRSNYLVVAGRRA----GLTRIWTMMADSQDGVFKAGTGLREVV--MEEPIFTVHLVESQMLEYEEPTFRMEYS 443 (751)
T ss_dssp EEEEEEECSSEEEEEEEET----TEEEEEEEECCTTTSCCCTTTCCEECC--CCCSSCEEEECGGGCCCTTCSCEEEEEE
T ss_pred EEEEEEEECCEEEEEEEeC----CEEEEEEEecccccccccCCccceEEC--CCCceeEEEeccCcccCCCCCEEEEEEe
Confidence 1112233466777665432 1246888886 3444 44443 2221111111 113 334433 3
Q ss_pred eCC-CcceEEEeCCCCceeeecC
Q 017349 283 EHG-DCPMKQYNPDDDTWRYVGG 304 (373)
Q Consensus 283 g~~-~~~~~~yd~~~~~W~~~~~ 304 (373)
+.. ...++.||..+++.+.+..
T Consensus 444 s~~~P~~~~~~d~~~~~~~~l~~ 466 (751)
T 2xe4_A 444 SLATPNTWFDVSPQDHSRTAVKV 466 (751)
T ss_dssp ETTEEEEEEEECTTTCCEEEEEE
T ss_pred CCCCCCEEEEEECCCCcEEEEec
Confidence 322 3578889998887777654
No 327
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=56.92 E-value=97 Score=26.81 Aligned_cols=119 Identities=8% Similarity=0.003 Sum_probs=60.2
Q ss_pred CCEEEEEEecC-CCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCC--CCCcceeEEEe
Q 017349 77 LPYLFIFSFHK-PTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDT--ETPMQSTIMYR 153 (373)
Q Consensus 77 ~~~l~~~gg~~-~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~--~~~~~~~~~yd 153 (373)
...+|+.-... ......+++||+.+.+-.. .++... . ...+....++.+|+..-..... ....+.+.+||
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~--~i~~g~----~-p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d 87 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLG--MVPTAF----N-GHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWD 87 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEE--EEECCE----E-EEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEE
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEE--EecCCC----C-CceEECCCCCEEEEEEecccccccCCCCCEEEEEE
Confidence 45778764321 1223478899998886543 333211 1 1334444356888875321100 01235689999
Q ss_pred CCCCcee-ccCCCCC----cceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeE
Q 017349 154 ATTNQWQ-LASPMLT----PRSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTW 208 (373)
Q Consensus 154 ~~t~~W~-~~~~~~~----~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 208 (373)
+.+.+-. .++-.+. ....+.++. -+..+|+.... ..+.+.++|..+++-
T Consensus 88 ~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~------~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 88 ADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS------PATSIGIVDVAKGDY 143 (361)
T ss_dssp TTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES------SSEEEEEEETTTTEE
T ss_pred CcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC------CCCeEEEEECCCCcE
Confidence 8876432 2221110 111222332 24567776321 125688999988753
No 328
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=56.55 E-value=79 Score=30.21 Aligned_cols=133 Identities=12% Similarity=0.126 Sum_probs=66.2
Q ss_pred eeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCC-eE--Eec----cCCccccccccEEEE--CCEEEEEeCccCCCccC
Q 017349 173 ASGNVNGKIMAVGGTGANINETMTAVECYDPESD-TW--TTA----AKLRMGLARYDSAVM--GSKMYVTEGWTWPFMFS 243 (373)
Q Consensus 173 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~-~W--~~~----~~~~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~ 243 (373)
+++...+++|+|-|.. .++++.... .. +.+ +.+|.. --++... ++++|+|-|
T Consensus 448 Ait~~rg~~yfFKg~~---------yWr~~~~~~~~~~P~~Is~~wp~LP~~--IDAA~~~~~~~k~yFFkG-------- 508 (631)
T 1ck7_A 448 GIAQIRGEIFFFKDRF---------IWRTVTPRDKPMGPLLVATFWPELPEK--IDAVYEAPQEEKAVFFAG-------- 508 (631)
T ss_dssp EEEECSSSEEEECSSE---------EEEESCTTSCCEEEEEGGGTCTTSCSS--CSBCCEETTTTEEEEEET--------
T ss_pred eeEecCCcEEEEcCCE---------EEEEcCCCCCCCCceeccccCCCCCcc--ceEEEEECCCCEEEEEec--------
Confidence 3445678899997753 555554431 11 111 122321 1122222 678999977
Q ss_pred CceEEEeCCCC--ce-eeccc-CccC--CcceEEEE--ECCeEEEEeeCCCcceEEEeCCCCceee-----ecC--CCCC
Q 017349 244 PRGGVYDINKD--TW-NLMSD-GMKE--GWTGISIV--LEGKLFVISEHGDCPMKQYNPDDDTWRY-----VGG--DKFP 308 (373)
Q Consensus 244 ~~i~~yd~~~~--~W-~~~~~-~~~~--~~~~~~~~--~~~~l~v~gg~~~~~~~~yd~~~~~W~~-----~~~--~~~~ 308 (373)
+..++|+..+- -+ +.+.. ..|. ....++.. .++++|++-|. ..|+||..+++-.. +.. +..|
T Consensus 509 ~~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~---~ywryd~~~~~vd~gYPk~i~~~w~G~p 585 (631)
T 1ck7_A 509 NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD---KFWRYNEVKKKMDPGFPKLIADAWNAIP 585 (631)
T ss_dssp TEEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT---EEEEEETTTTEECTTCCEETTTSCSSCC
T ss_pred CEEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC---EEEEEcCCcccccCCCCcchHhhcCCCC
Confidence 45788875321 01 01111 0111 11222222 36899999875 89999986652111 110 1222
Q ss_pred CcccccceEEEEeC--CEEEEEeCC
Q 017349 309 CEVMHRPFAVNGVE--GKIYVVSSG 331 (373)
Q Consensus 309 ~~~~~~~~~~~~~~--~~l~i~GG~ 331 (373)
...-+++..+ +++|++-|.
T Consensus 586 ----~~iDAAf~~~~~g~~YFFkG~ 606 (631)
T 1ck7_A 586 ----DNLDAVVDLQGGGHSYFFKGA 606 (631)
T ss_dssp ----TTCCEEECCTTSCBCEEEETT
T ss_pred ----CCCcEeEEEcCCCeEEEEECC
Confidence 2223444443 889999884
No 329
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=56.11 E-value=1.5e+02 Score=28.77 Aligned_cols=104 Identities=4% Similarity=0.026 Sum_probs=59.7
Q ss_pred CceEEEEeCCC--CeEEeccCCccccccccEEEECCEEEEEeCccCC----CccCCceEEEeCCC--------Cceeecc
Q 017349 195 MTAVECYDPES--DTWTTAAKLRMGLARYDSAVMGSKMYVTEGWTWP----FMFSPRGGVYDINK--------DTWNLMS 260 (373)
Q Consensus 195 ~~~~~~yd~~t--~~W~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~----~~~~~~i~~yd~~~--------~~W~~~~ 260 (373)
.+.++..|... ..|..+ .+|. ...-....++++|+....+.. ......+.+.|..+ ..|+.+-
T Consensus 268 ~~~~~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKI-NMPS--DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF 344 (711)
T ss_dssp CEEEEEEECSSSSCEEEEC-CSCT--TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE
T ss_pred ceeEEEEcCCCCCCcceEe-ecCC--cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE
Confidence 46677777653 678777 2332 211134568999997643211 12346788998865 3688732
Q ss_pred cCccCCcceEEEEECCeEEEEeeCC-CcceEEEeCCCCceee
Q 017349 261 DGMKEGWTGISIVLEGKLFVISEHG-DCPMKQYNPDDDTWRY 301 (373)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~v~gg~~-~~~~~~yd~~~~~W~~ 301 (373)
.+-...........++.|++..-.+ ...+.++|+.+++|..
T Consensus 345 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~ 386 (711)
T 4hvt_A 345 TPTANEVFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTK 386 (711)
T ss_dssp CCCTTEEEEEEEECSSCEEEEEEETTEEEEEEECEETTEECC
T ss_pred CCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEE
Confidence 2122222222345577777765332 3478899988887753
No 330
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=55.34 E-value=1.5e+02 Score=28.38 Aligned_cols=106 Identities=6% Similarity=-0.053 Sum_probs=51.4
Q ss_pred ceEEEEeCCCCe---EEeccCC---ccccccccEEEE--CCEEEEEeCccCCCccCCceEEEe----CCCCceeeccc--
Q 017349 196 TAVECYDPESDT---WTTAAKL---RMGLARYDSAVM--GSKMYVTEGWTWPFMFSPRGGVYD----INKDTWNLMSD-- 261 (373)
Q Consensus 196 ~~~~~yd~~t~~---W~~~~~~---~~~~~~~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd----~~~~~W~~~~~-- 261 (373)
..++++|..+++ |..+... .........+.. ++++++..... ......++.+| ..++++..+..
T Consensus 224 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~--~~~~~~l~~~d~~~~~~~g~~~~~~~~~ 301 (719)
T 1z68_A 224 VRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKR--VQNVSVLSICDFREDWQTWDCPKTQEHI 301 (719)
T ss_dssp EEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEES--STTEEEEEEEEECSSSSSEECCGGGEEE
T ss_pred eEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEecc--ccCeEEEEEEcccCCCCCCceEEEEecc
Confidence 367888888765 2233211 011111111222 67766553221 11224688899 88877765531
Q ss_pred -CccCCcc------eEEEEECCe-EEEEee--CCCcceEEEeCCCCceeeec
Q 017349 262 -GMKEGWT------GISIVLEGK-LFVISE--HGDCPMKQYNPDDDTWRYVG 303 (373)
Q Consensus 262 -~~~~~~~------~~~~~~~~~-l~v~gg--~~~~~~~~yd~~~~~W~~~~ 303 (373)
....... .....-+|+ |+++.. .+...++.+|..+++...+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt 353 (719)
T 1z68_A 302 EESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQIT 353 (719)
T ss_dssp EECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECS
T ss_pred cccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecc
Confidence 0111111 112222454 444322 22457899999887766654
No 331
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=54.00 E-value=1.4e+02 Score=27.61 Aligned_cols=240 Identities=10% Similarity=-0.015 Sum_probs=118.5
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEE-------eccCCEEEEEcCccCCCCCCccee
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTS-------LPRQGKLFVLGGMRSDTETPMQST 149 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~v~GG~~~~~~~~~~~~ 149 (373)
++.||+.... ...+.++|+.++....+...... ....-.+.++ ...++.||+..-..... .....+
T Consensus 151 ~~~Lyv~~~~----~~~i~~ID~~~~~v~~l~~~~~~--~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~-~~~~~V 223 (496)
T 3kya_A 151 KDHLYICYDG----HKAIQLIDLKNRMLSSPLNINTI--PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG-DESPSV 223 (496)
T ss_dssp EEEEEEEEET----EEEEEEEETTTTEEEEEECCTTS--SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG-GGEEEE
T ss_pred CCEEEEEECC----CCeEEEEECCCCEEEEEEccCcc--ccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc-ccCceE
Confidence 3567776532 34588899999988877554321 1112234444 33245688874331110 123468
Q ss_pred EEEeCCC-CceeccC---CCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCC-------CCe-EEec----
Q 017349 150 IMYRATT-NQWQLAS---PMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPE-------SDT-WTTA---- 211 (373)
Q Consensus 150 ~~yd~~t-~~W~~~~---~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~-------t~~-W~~~---- 211 (373)
++++... +.|...+ .++.-...++++.. ++.||+.--. ...+++||+. +.. |...
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~-------~g~V~r~d~~~~~~~~~tg~~~tp~~~~~ 296 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYE-------KGQVFRLDLVDYFKTIKNGGSWDPIVKNN 296 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETT-------TTEEEEECHHHHHHHHHTTCCCCCBGGGC
T ss_pred EEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECC-------CCEEEEEecccccccccCceeeccccccc
Confidence 8887655 3554211 11111223344443 4788886533 2469999997 554 4321
Q ss_pred -------cCCccccccccEEEE-CCE-EEEEeCccCCCccCCceEEEeC--CCCcee---ec-ccC-c---------cCC
Q 017349 212 -------AKLRMGLARYDSAVM-GSK-MYVTEGWTWPFMFSPRGGVYDI--NKDTWN---LM-SDG-M---------KEG 266 (373)
Q Consensus 212 -------~~~~~~~~~~~~~~~-~~~-lyv~gG~~~~~~~~~~i~~yd~--~~~~W~---~~-~~~-~---------~~~ 266 (373)
...+........++. +|. ||+.--.. +.|.++|. .++... .+ ... . ...
T Consensus 297 ~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~------h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~ 370 (496)
T 3kya_A 297 PNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINN------HYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEAR 370 (496)
T ss_dssp TTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTT------TEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCB
T ss_pred ccccceeEecCCCCCceEEEEcCCCCEEEEEeCCC------CEEEEEecCCCcceecccEEecCCCCCCcccCCcccccc
Confidence 111111111223333 454 88874322 57777544 443321 11 100 0 000
Q ss_pred -cceE-E-EE--------ECCeEEEEeeCCCcceEEEeCCCCceeeecCCCC-----------------C-CcccccceE
Q 017349 267 -WTGI-S-IV--------LEGKLFVISEHGDCPMKQYNPDDDTWRYVGGDKF-----------------P-CEVMHRPFA 317 (373)
Q Consensus 267 -~~~~-~-~~--------~~~~l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~-----------------~-~~~~~~~~~ 317 (373)
.... . ++ -++.|||.... ...|.+++++ +.-+.+..... + ........+
T Consensus 371 f~~P~~gv~vd~~~~~~~~~g~lyVaD~~-N~rIr~i~~~-G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~g 448 (496)
T 3kya_A 371 MNNPCQGVFVKNPDYTGEEEYDFYFVDRL-NFCVRKVTPE-GIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSG 448 (496)
T ss_dssp CSSEEEEEEEECTTCCSSCCEEEEEEEGG-GTEEEEECTT-CBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEE
T ss_pred cCCCeEEEEEccccccccCCCeEEEEECC-CCEEEEEeCC-CCEEEEecccccccccCccccccCCCCchhhhhcCCCcE
Confidence 1111 2 33 24689988643 6689999964 45555432111 0 012344567
Q ss_pred EEEeC--CEEEEEeCCceeeeeEE
Q 017349 318 VNGVE--GKIYVVSSGLNVAIGRV 339 (373)
Q Consensus 318 ~~~~~--~~l~i~GG~~~~~~~~~ 339 (373)
++... +.|||.--. ++.+.++
T Consensus 449 Iavd~~~g~lyVaD~~-N~rIrki 471 (496)
T 3kya_A 449 LVYDDVKEMFYVHDQV-GHTIRTI 471 (496)
T ss_dssp EEEETTTTEEEEEETT-TTEEEEE
T ss_pred EEEECCCCEEEEEeCC-CCEEEEE
Confidence 77663 899998863 3444443
No 332
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=53.71 E-value=36 Score=29.68 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=32.1
Q ss_pred CceEEEeCCCCc--eeeccc---CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 244 PRGGVYDINKDT--WNLMSD---GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 244 ~~i~~yd~~~~~--W~~~~~---~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
..++++|.++++ |+.-.. ++..... .....++.+|++.......++.||.+++.|.
T Consensus 20 G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~-~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~ 80 (339)
T 2be1_A 20 GGLHAVDRRNGHIIWSIEPENFQPLIEIQE-PSRLETYETLIIEPFGDGNIYYFNAHQGLQK 80 (339)
T ss_dssp SCEEEEETTTTEEEEEECGGGSCCSEECCC-SCTTTSSEEEEECCSTTTEEEEEETTTEEEE
T ss_pred CeEEEEECCCCcEEEEecCCccCCcEEecC-CccccCCcEEEEEECCCCEEEEEECCCCcEE
Confidence 478899988774 875432 1111000 0011255677765334668899998877655
No 333
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=52.67 E-value=1.9e+02 Score=28.89 Aligned_cols=136 Identities=7% Similarity=0.016 Sum_probs=67.1
Q ss_pred eeEEEeCCCCceeccCCCCCcceeeeeeE-eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEec--cCC------cccc
Q 017349 148 STIMYRATTNQWQLASPMLTPRSFFASGN-VNGKIMAVGGTGANINETMTAVECYDPESDTWTTA--AKL------RMGL 218 (373)
Q Consensus 148 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~------~~~~ 218 (373)
.+.+||..+++-... +.....-.+++. -+++.++.|+.+ ..+.+||..+..-... +.+ +..+
T Consensus 80 ~v~lWd~~~~~~~~~--~~~~~~V~~v~~sp~g~~l~sgs~d-------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h 150 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTT--VFVPGKITSIDTDASLDWMLIGLQN-------GSMIVYDIDRDQLSSFKLDNLQKSSFFPAAR 150 (902)
T ss_dssp EEEEEETTTCSEEEE--EECSSCEEEEECCTTCSEEEEEETT-------SCEEEEETTTTEEEEEEECCHHHHHTCSSSC
T ss_pred eEEEEECCCCcEEEE--EcCCCCEEEEEECCCCCEEEEEcCC-------CcEEEEECCCCccccceeccccccccccccC
Confidence 788999987753211 111111111111 245555666554 3588999888764211 000 1111
Q ss_pred -cc-ccEEEEC--CEEEEEeCccCCCccCCceEEEeCCCCceee-cccC----ccC---------C--cceEEEEE--CC
Q 017349 219 -AR-YDSAVMG--SKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-MSDG----MKE---------G--WTGISIVL--EG 276 (373)
Q Consensus 219 -~~-~~~~~~~--~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-~~~~----~~~---------~--~~~~~~~~--~~ 276 (373)
.. .+.+... +.++++|+.+ ..+ .||..+++-.. +... .+. . ..-.++.+ ++
T Consensus 151 ~~~V~sl~~sp~~~~~l~~g~~d------g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg 223 (902)
T 2oaj_A 151 LSPIVSIQWNPRDIGTVLISYEY------VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS 223 (902)
T ss_dssp CCCCCEEEEETTEEEEEEEECSS------CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS
T ss_pred CCCeEEEEEccCCCCEEEEEeCC------CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC
Confidence 11 1223332 3566666554 457 99998875322 1100 000 0 00112333 57
Q ss_pred eEEEEeeCCCcceEEEeCCCCcee
Q 017349 277 KLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 277 ~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
+.++.|+. ...+..||..+++-.
T Consensus 224 ~~lasgs~-Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 224 LHIITIHE-DNSLVFWDANSGHMI 246 (902)
T ss_dssp SEEEEEET-TCCEEEEETTTCCEE
T ss_pred CEEEEEEC-CCeEEEEECCCCcEE
Confidence 77777765 568999999877543
No 334
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=50.41 E-value=1.1e+02 Score=25.54 Aligned_cols=18 Identities=22% Similarity=0.521 Sum_probs=12.8
Q ss_pred eeeeeEeCCeEEEEcCCC
Q 017349 171 FFASGNVNGKIMAVGGTG 188 (373)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~ 188 (373)
.|+++.-++++|..|-..
T Consensus 73 ~hs~~l~~G~v~~wG~n~ 90 (282)
T 3qhy_B 73 YHSLALKDGEVIAWGGNE 90 (282)
T ss_dssp SEEEEEETTEEEEEECCT
T ss_pred CEEEEEECCEEEEeeCCC
Confidence 455555589999998654
No 335
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=48.46 E-value=1.5e+02 Score=26.34 Aligned_cols=121 Identities=10% Similarity=-0.045 Sum_probs=65.7
Q ss_pred CCCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCCC--CCcceeEEE
Q 017349 75 LSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDTE--TPMQSTIMY 152 (373)
Q Consensus 75 ~~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~~--~~~~~~~~y 152 (373)
.....+|+.-.........+.++|+.+++-.. .++... ..+ .++...+..+|+......... ...+.+.++
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~--~I~vG~----~P~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG--MIDGGF----LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEE--EEEECS----SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEE--EEECCC----CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 34778998754322224679999999886533 333222 112 444444667888753210000 124579999
Q ss_pred eCCCCceeccCCCCC-c-----ceeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeE
Q 017349 153 RATTNQWQLASPMLT-P-----RSFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTW 208 (373)
Q Consensus 153 d~~t~~W~~~~~~~~-~-----r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 208 (373)
|+.+++-...=+.+. . ...+.+++ -+.++|+.... ..+.+.+.|..+++=
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~------~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS------PAPAVGVVDLEGKAF 172 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS------SSCEEEEEETTTTEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC------CCCeEEEEECCCCcE
Confidence 999986432111111 1 12223333 35678886422 135788999998864
No 336
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=48.37 E-value=1.5e+02 Score=26.33 Aligned_cols=72 Identities=15% Similarity=0.074 Sum_probs=41.7
Q ss_pred CCEEEEEeCccC--C-CccCCceEEEeCCCCceeecccCccCCcceEEEEECCe--EEEEeeCCCcceEEEeCCCCcee
Q 017349 227 GSKMYVTEGWTW--P-FMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGK--LFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 227 ~~~lyv~gG~~~--~-~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~--l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
++++|+.-+... . ....+.+.++|+++.+-...-. ....-.+..+.-+++ ||+..+ ..+.+.+||..+++-.
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~-vg~~~~~lavs~D~~~~ly~tn~-~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYALST-GDKTLYIHDAESGEEL 367 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEECEEEECSSSSCEEEEEET-TTTEEEEEETTTCCEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE-CCCCcceEEECCCCCeEEEEEcC-CCCeEEEEECCCCcEE
Confidence 578999743211 1 1123679999999987543211 222222333444654 666544 2668999999887644
No 337
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=47.95 E-value=1.4e+02 Score=25.99 Aligned_cols=26 Identities=8% Similarity=0.005 Sum_probs=18.5
Q ss_pred CCeEEEEeeCCCcceEEEeCCCCcee
Q 017349 275 EGKLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 275 ~~~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
.+.+++++|.....+..||..++.-.
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEE
Confidence 35667777765778999998876443
No 338
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=46.83 E-value=1.2e+02 Score=24.99 Aligned_cols=124 Identities=10% Similarity=0.034 Sum_probs=0.0
Q ss_pred EeccCCccccccccEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCcc
Q 017349 209 TTAAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDCP 288 (373)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~~ 288 (373)
+.++.+....++-+...-+++||++.... ..++.+|++...++.++. ....-....+..++..|++.......
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~------~~I~~ld~~g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs~E~~~~ 92 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKP------AAIVEMTTNGDLIRTIPL-DFVKDLETIEYIGDNQFVISDERDYA 92 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETT------EEEEEEETTCCEEEEEEC-SSCSSEEEEEECSTTEEEEEETTTTE
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCC------CeEEEEeCCCCEEEEEec-CCCCChHHeEEeCCCEEEEEECCCCc
Q ss_pred eEEEeCCCCce-eeecCCCCCCcccc-----cceEEEEeCCEEEEEeCCceeeeeEE
Q 017349 289 MKQYNPDDDTW-RYVGGDKFPCEVMH-----RPFAVNGVEGKIYVVSSGLNVAIGRV 339 (373)
Q Consensus 289 ~~~yd~~~~~W-~~~~~~~~~~~~~~-----~~~~~~~~~~~l~i~GG~~~~~~~~~ 339 (373)
+.+|+...+.= ..+.....+..... .+.+.-..+++||++-......+..+
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
No 339
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=46.00 E-value=1.7e+02 Score=26.33 Aligned_cols=123 Identities=9% Similarity=0.098 Sum_probs=65.9
Q ss_pred CCCeEEe--ccCCccccccccEEEECCEEEEEeCccCCCccCCce-EEEeCC---CC-ce--eecccCccCCcceEE-EE
Q 017349 204 ESDTWTT--AAKLRMGLARYDSAVMGSKMYVTEGWTWPFMFSPRG-GVYDIN---KD-TW--NLMSDGMKEGWTGIS-IV 273 (373)
Q Consensus 204 ~t~~W~~--~~~~~~~~~~~~~~~~~~~lyv~gG~~~~~~~~~~i-~~yd~~---~~-~W--~~~~~~~~~~~~~~~-~~ 273 (373)
....|+. ++.+|..-.-|+-+.+++.-|.+|-..+.-.. ..+ ..|-+. +. .. +.++..........| -.
T Consensus 268 ~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~P-Re~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvky 346 (670)
T 3ju4_A 268 HKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAP-REVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKY 346 (670)
T ss_dssp TTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSS-CEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEE
T ss_pred ccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCc-ceeeEEEecccccCCcceeeeechhhhccccccchhhh
Confidence 4455654 34455444557777788777788755432222 222 222211 11 11 122221222223333 36
Q ss_pred ECCeEEEEeeC-C----CcceEEEeCCCCceeeecCCCCCCcccccceEEEEeCCEEEEEeC
Q 017349 274 LEGKLFVISEH-G----DCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGVEGKIYVVSS 330 (373)
Q Consensus 274 ~~~~l~v~gg~-~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~l~i~GG 330 (373)
++|+||++... . ...+.+-+.....|+.+.- |...+ ....-.+..++.||+||-
T Consensus 347 YdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrf-p~nvH--htnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 347 YDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRF-PHNVH--HTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp ETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEEC-TTCCC--SSCCCEEEETTEEEEEEE
T ss_pred hCCEEEEEecCcCCCCCcceeeeecccCCchhheec-ccccc--ccCCCcceeCCEEEEEec
Confidence 79999998532 2 3466777777778999862 22211 222335788999999995
No 340
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=45.26 E-value=97 Score=27.04 Aligned_cols=63 Identities=10% Similarity=0.143 Sum_probs=35.7
Q ss_pred CCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CCe-EEEEeeCCCcceEEEeCCCCc
Q 017349 227 GSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGK-LFVISEHGDCPMKQYNPDDDT 298 (373)
Q Consensus 227 ~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~-l~v~gg~~~~~~~~yd~~~~~ 298 (373)
++++++.||.+ ..+.++|..++.=.......... ..++.+ ++. +++.|+. ...+..||..+++
T Consensus 155 d~~~las~s~D------~tv~~Wd~~~~~~~~~~~~~~~~--v~~v~~~p~~~~~l~~~~~-d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 155 AEQVIASVGDD------CTLIIWRLTDEGPILAGYPLSSP--GISVQFRPSNPNQLIVGER-NGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEEETT------SEEEEEEEETTEEEEEEEECSSC--EEEEEEETTEEEEEEEEET-TSEEEEEETTCCC
T ss_pred CCCEEEEEECC------CeEEEEECCCCceeeeecCCCCC--cEEEEECCCCCceEEecCC-CCEEEEEECCCCc
Confidence 67888888877 67888998665411111001111 112222 343 5555554 6688899987654
No 341
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=44.47 E-value=1.4e+02 Score=24.93 Aligned_cols=18 Identities=22% Similarity=0.340 Sum_probs=12.1
Q ss_pred eeeeeEeCCeEEEEcCCC
Q 017349 171 FFASGNVNGKIMAVGGTG 188 (373)
Q Consensus 171 ~~~~~~~~~~iyv~GG~~ 188 (373)
.|+++.-++++|..|-..
T Consensus 34 ~h~~~l~~G~v~~wG~n~ 51 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGANL 51 (282)
T ss_dssp SEEEEEETTEEEEEECCS
T ss_pred CeEEEEECCEEEEEeCCC
Confidence 344444589999998553
No 342
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=43.28 E-value=1.7e+02 Score=25.55 Aligned_cols=118 Identities=14% Similarity=-0.017 Sum_probs=59.7
Q ss_pred CCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCC--CCCcceeEEEe
Q 017349 76 SLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDT--ETPMQSTIMYR 153 (373)
Q Consensus 76 ~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~--~~~~~~~~~yd 153 (373)
....+|+.-.........+.+||+.+.+-. ..++... .. +.+....++.+|+..-..... ....+.+.+||
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~--~~i~~g~----~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGSGSIL--GHVNGGF----LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCCCeEE--EEecCCC----CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 356778764311111117899999887643 3444221 12 344444467899875321110 01245788999
Q ss_pred CCCCcee-ccCCCC-Ccc-----eeeeeeE--eCCeEEEEcCCCCCCCCcCceEEEEeCCCCeE
Q 017349 154 ATTNQWQ-LASPML-TPR-----SFFASGN--VNGKIMAVGGTGANINETMTAVECYDPESDTW 208 (373)
Q Consensus 154 ~~t~~W~-~~~~~~-~~r-----~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W 208 (373)
+.+.+-. .++ ++ .+| ....++. -+..+|+..-. ..+.+.++| .+++-
T Consensus 104 ~~t~~~~~~i~-~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~------~~~~v~viD-~t~~~ 159 (373)
T 2mad_H 104 PVTFLPIADIE-LPDAPRFDVGPYSWMNANTPNNADLLFFQFA------AGPAVGLVV-QGGSS 159 (373)
T ss_pred CCCCcEEEEEE-CCCccccccCCCccceEECCCCCEEEEEecC------CCCeEEEEE-CCCCE
Confidence 9876432 221 11 111 1112222 35677776321 135689999 88754
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=42.68 E-value=61 Score=28.21 Aligned_cols=97 Identities=8% Similarity=0.056 Sum_probs=49.3
Q ss_pred eeEEEeCCCC--ceeccCC----CCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCcccc---
Q 017349 148 STIMYRATTN--QWQLASP----MLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGL--- 218 (373)
Q Consensus 148 ~~~~yd~~t~--~W~~~~~----~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~--- 218 (373)
.++.+|..++ .|+.-.. +-..+.. ....++.+|++.... .-.++.||..++.|+---.++.-.
T Consensus 21 ~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~--~~~~~~~~~vv~p~~------dG~l~a~~~~~G~~~~~~~~~~lv~~S 92 (339)
T 2be1_A 21 GLHAVDRRNGHIIWSIEPENFQPLIEIQEP--SRLETYETLIIEPFG------DGNIYYFNAHQGLQKLPLSIRQLVSTS 92 (339)
T ss_dssp CEEEEETTTTEEEEEECGGGSCCSEECCCS--CTTTSSEEEEECCST------TTEEEEEETTTEEEEEEEEHHHHHTTC
T ss_pred eEEEEECCCCcEEEEecCCccCCcEEecCC--ccccCCcEEEEEECC------CCEEEEEECCCCcEEeeeccccceecc
Confidence 6788888777 5764322 1111111 111355677664321 135888998887665321222111
Q ss_pred --c-cccEEE-------ECCEEEEEeCccCCCccCCceEEEeCCCCc--eeec
Q 017349 219 --A-RYDSAV-------MGSKMYVTEGWTWPFMFSPRGGVYDINKDT--WNLM 259 (373)
Q Consensus 219 --~-~~~~~~-------~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~--W~~~ 259 (373)
. ....++ .++.+| +|..+ ..++++|..+++ |+.-
T Consensus 93 P~~~~~~pvv~~~~~~~~~g~Vy-~Gs~~------g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 93 PLHLKTNIVVNDSGKIVEDEKVY-TGSMR------TIMYTINMLNGEIISAFG 138 (339)
T ss_dssp SEEEECC----------CCEEEE-ECEEE------EEEEEEETTTCCEEEEES
T ss_pred ccccCCCceeecccccccCCEEE-EEecC------CEEEEEECCCCcEEEEEe
Confidence 1 111122 355555 45544 578999999886 7653
No 344
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=41.22 E-value=3.2e+02 Score=28.29 Aligned_cols=133 Identities=11% Similarity=0.120 Sum_probs=72.1
Q ss_pred CcceeEEEeCCCCceeccCCCCCcceeeeeeEeCCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccccc---
Q 017349 145 PMQSTIMYRATTNQWQLASPMLTPRSFFASGNVNGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLARY--- 221 (373)
Q Consensus 145 ~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~--- 221 (373)
....+++|+...++.+.+......-...+++.+++++.+.-|. .+.+|+...++--... ...+.+
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig~---------~l~vy~l~~~~~L~~~---~~~~~~i~~ 929 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINS---------TVRLYEWTTEKELRTE---CNHYNNIMA 929 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEETT---------EEEEEEECTTSCEEEE---EEECCCSCE
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcCC---------EEEEEECCCCceEEEE---eeccccEEE
Confidence 4567888888766666555444444556677788877765543 4788887765421110 111111
Q ss_pred -cEEEECCEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEECCeEEEEeeCCCc--ceEEEeCC
Q 017349 222 -DSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVLEGKLFVISEHGDC--PMKQYNPD 295 (373)
Q Consensus 222 -~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~v~gg~~~~--~~~~yd~~ 295 (373)
...+.++.|++.--.. .-.+..|+...++-..+.......+..++..+++. .++++.... .+.+||++
T Consensus 930 ~~l~~~~~~I~vgD~~~-----Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 930 LYLKTKGDFILVGDLMR-----SVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp EEEEEETTEEEEEESSB-----CEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECTT
T ss_pred EEEeccCCEEEEEEhhh-----eEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCCC
Confidence 1223466655432221 13467799999988888764444444444344333 333343333 34456653
No 345
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=40.89 E-value=2.4e+02 Score=26.68 Aligned_cols=158 Identities=9% Similarity=0.007 Sum_probs=83.1
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeE----eCCeEEEEcCCC---------C-CCCCc
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGN----VNGKIMAVGGTG---------A-NINET 194 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~----~~~~iyv~GG~~---------~-~~~~~ 194 (373)
++++||... ....+.+.|+.+.+=.++-.+|.....|+++. -++++|+.+... . ..+..
T Consensus 101 G~~lfVnd~-------~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 101 GRFLFMNDK-------ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEET-------TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCEEEEEcC-------CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 567888532 24479999999987544335555555666654 356777775321 0 01223
Q ss_pred CceEEEEeCCCCe--EEecc-CCccccccccEEEECC-EEEEEeCcc-------------------------------CC
Q 017349 195 MTAVECYDPESDT--WTTAA-KLRMGLARYDSAVMGS-KMYVTEGWT-------------------------------WP 239 (373)
Q Consensus 195 ~~~~~~yd~~t~~--W~~~~-~~~~~~~~~~~~~~~~-~lyv~gG~~-------------------------------~~ 239 (373)
.+.+-+.|.++.+ |+..- .-|. ...+..+| .+|+..-.. +.
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~pd----~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNLD----NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCCC----CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred CceEEEEECCCCeEEEEEEeCCCcc----ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 4567888998875 54321 1111 11111122 233322111 11
Q ss_pred CccCCceEEEeCCCCceee-ccc-CccCCcceEEEEECCeEEEEeeCCCcceEEEeCCCC
Q 017349 240 FMFSPRGGVYDINKDTWNL-MSD-GMKEGWTGISIVLEGKLFVISEHGDCPMKQYNPDDD 297 (373)
Q Consensus 240 ~~~~~~i~~yd~~~~~W~~-~~~-~~~~~~~~~~~~~~~~l~v~gg~~~~~~~~yd~~~~ 297 (373)
....+.+-+.|..+.+... +.. +.+..-++..+.-+|+..++.+...+.+.+||..+.
T Consensus 250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp SEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred eeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 1223567888888844333 111 222223333344567766555555789999998854
No 346
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=34.50 E-value=3.3e+02 Score=26.39 Aligned_cols=258 Identities=14% Similarity=0.108 Sum_probs=124.3
Q ss_pred CCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEe-c-cCCEEEEEcCccCCCC-CCcceeEEEe
Q 017349 77 LPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSL-P-RQGKLFVLGGMRSDTE-TPMQSTIMYR 153 (373)
Q Consensus 77 ~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~-~~~~i~v~GG~~~~~~-~~~~~~~~yd 153 (373)
.+.+|+.. . ...+++.+-...+|+.+...+.............++ . ..+.||+..|...+.. .....+++=.
T Consensus 35 ~~~~~~~~-~----~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~ 109 (737)
T 2cn3_A 35 KDLIYARA-A----IGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRST 109 (737)
T ss_dssp TTCEEEEC-S----SSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEES
T ss_pred CCEEEEEe-c----CCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeC
Confidence 45677643 1 123788888889999976533111000112333233 2 1357888765311100 1123455555
Q ss_pred CCCCceeccCCC-CC-----cc-eeeeeeEe---CCeEEEEcCCCCCCCCcCceEEEEeCCCCeEEeccCCccccc----
Q 017349 154 ATTNQWQLASPM-LT-----PR-SFFASGNV---NGKIMAVGGTGANINETMTAVECYDPESDTWTTAAKLRMGLA---- 219 (373)
Q Consensus 154 ~~t~~W~~~~~~-~~-----~r-~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~---- 219 (373)
-.-++|+++... +. .+ ..+.++.. .+.+|+..... ..+++=+=.-.+|+.+..+|....
T Consensus 110 DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g-------~gl~~S~DgG~tW~~~~~~~~~~~~~~~ 182 (737)
T 2cn3_A 110 DRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCG-------NGLWRSTDYGVTWSKVESFPNPGTYIYD 182 (737)
T ss_dssp SSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTT-------CCEEEESSTTSSCEECTTCCCCCCCBSC
T ss_pred CCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccC-------CcEEEeCCCCcceecccCCCCCcccccC
Confidence 555689886421 10 12 11333332 25666643110 123322222357998876554210
Q ss_pred ----------cccEEEEC----------CEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCcceEEEEE--CCe
Q 017349 220 ----------RYDSAVMG----------SKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGWTGISIVL--EGK 277 (373)
Q Consensus 220 ----------~~~~~~~~----------~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~ 277 (373)
....+.++ ++||+..... ...+++=.-.-.+|+.+.. ++........++ ++.
T Consensus 183 p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~-----~~~v~~S~DgG~tW~~~~~-~p~~~~~~~~~~~~~~~ 256 (737)
T 2cn3_A 183 PNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADK-----NESIYRSTDGGVTWKAVPG-QPKGLLPHHGVLASNGM 256 (737)
T ss_dssp TTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCS-----SCCEEEESSTTSCCEECTT-CCCSSEEEEEEECTTSE
T ss_pred cccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCC-----CccEEEEcCCCCceEECCC-CCCcccceEEEECCCCe
Confidence 01112221 2677653221 0124333333457998874 443333223334 688
Q ss_pred EEEEeeC--------CCcceEEEeCCCCceeeecCCCCCCcccccceEEEEe----CCEEEEEeCCceeeeeEEEEeecC
Q 017349 278 LFVISEH--------GDCPMKQYNPDDDTWRYVGGDKFPCEVMHRPFAVNGV----EGKIYVVSSGLNVAIGRVYEEQNG 345 (373)
Q Consensus 278 l~v~gg~--------~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~----~~~l~i~GG~~~~~~~~~~~~~~d 345 (373)
+|+..+. ....+++++-...+|+.+...+......+..++.+.+ .+.||+.+...-.....++. -.
T Consensus 257 l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~~~~~l~~--S~ 334 (737)
T 2cn3_A 257 LYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWPDEYIFR--ST 334 (737)
T ss_dssp EEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEECCCSSCCCEEE--ES
T ss_pred EEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecccCCCCccEEE--eC
Confidence 9987532 2457899999999999987543210011223333332 36788877531111123443 34
Q ss_pred CcccceEEe
Q 017349 346 GISAEWKVM 354 (373)
Q Consensus 346 ~~~~~W~~~ 354 (373)
.....|+.+
T Consensus 335 DgG~tW~~~ 343 (737)
T 2cn3_A 335 DGGATWKNI 343 (737)
T ss_dssp STTSSCEES
T ss_pred CCCccccch
Confidence 556778776
No 347
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=32.35 E-value=2.7e+02 Score=24.73 Aligned_cols=156 Identities=12% Similarity=0.015 Sum_probs=70.8
Q ss_pred CEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCCCcceeeeeeEe--CCeEEEEcCCCCCCCCcCceEEEEeCCCCe
Q 017349 130 GKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPMLTPRSFFASGNV--NGKIMAVGGTGANINETMTAVECYDPESDT 207 (373)
Q Consensus 130 ~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~t~~ 207 (373)
+.+++.|+.+ ..+.+||..++.-.. .... .......+.+ +++.++.|+.+ ..+.+||+....
T Consensus 162 ~~~las~s~D-------g~v~iwD~~~~~~~~-~~~~-~~~~v~~v~wspdg~~lasgs~d-------g~v~iwd~~~~~ 225 (434)
T 2oit_A 162 PSMVAVCLAD-------GSIAVLQVTETVKVC-ATLP-STVAVTSVCWSPKGKQLAVGKQN-------GTVVQYLPTLQE 225 (434)
T ss_dssp TTEEEEEETT-------SCEEEEEESSSEEEE-EEEC-GGGCEEEEEECTTSSCEEEEETT-------SCEEEECTTCCE
T ss_pred CCEEEEEECC-------CeEEEEEcCCCccee-eccC-CCCceeEEEEcCCCCEEEEEcCC-------CcEEEEccCCcc
Confidence 5677777652 258889988763211 1111 1111122222 56666667654 358899987333
Q ss_pred EEeccCCcccc-----ccccEEEECCEEEEEeCc--cCCCccCCceEEEeCCCC------ceeecccCcc---CCc--ce
Q 017349 208 WTTAAKLRMGL-----ARYDSAVMGSKMYVTEGW--TWPFMFSPRGGVYDINKD------TWNLMSDGMK---EGW--TG 269 (373)
Q Consensus 208 W~~~~~~~~~~-----~~~~~~~~~~~lyv~gG~--~~~~~~~~~i~~yd~~~~------~W~~~~~~~~---~~~--~~ 269 (373)
-..+....... .-.+.....+..|+++-. ++.......+..||+.+. .|+....+.. ..+ ..
T Consensus 226 ~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 305 (434)
T 2oit_A 226 KKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHY 305 (434)
T ss_dssp EEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCE
T ss_pred cccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcce
Confidence 33332111100 111122223334443211 111123345888888644 4555443210 111 11
Q ss_pred EE-EEECCeEEEEeeCCCcceEEEeCCC--Cceee
Q 017349 270 IS-IVLEGKLFVISEHGDCPMKQYNPDD--DTWRY 301 (373)
Q Consensus 270 ~~-~~~~~~l~v~gg~~~~~~~~yd~~~--~~W~~ 301 (373)
.. ..-+.++++++.....++.++.... ..|+.
T Consensus 306 ~~~~l~dw~l~~v~s~~s~dv~vl~~~~~~~~~~~ 340 (434)
T 2oit_A 306 YLSYIEEWDLVLAASAASTEVSILARQSDQINWES 340 (434)
T ss_dssp EEEEEGGGTEEEEEETTCSBCEEEEECTTSSCEEE
T ss_pred eeehhccCCEEEEecCCCCceeEEEecCCCCccEE
Confidence 11 2235566666666566666665433 25743
No 348
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=30.14 E-value=3.8e+02 Score=25.74 Aligned_cols=72 Identities=11% Similarity=0.022 Sum_probs=36.2
Q ss_pred eeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccCCEEEEEcCccCCC--CCCcceeEEEeCCCCceeccCC
Q 017349 92 IQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQGKLFVLGGMRSDT--ETPMQSTIMYRATTNQWQLASP 164 (373)
Q Consensus 92 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~GG~~~~~--~~~~~~~~~yd~~t~~W~~~~~ 164 (373)
..+..+|..+++-..+-...... .....+....++.+++..+++...... .....++++||..+++-+++..
T Consensus 36 ~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~ 109 (740)
T 4a5s_A 36 NNILVFNAEYGNSSVFLENSTFD-EFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEER 109 (740)
T ss_dssp TEEEEEETTTCCEEEEECTTTTT-TCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC
T ss_pred CcEEEEECCCCceEEEEechhhh-hhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEccc
Confidence 35888999888755442211000 000111112333455544444321110 1233678999999998766644
No 349
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=27.75 E-value=3e+02 Score=23.89 Aligned_cols=189 Identities=11% Similarity=0.078 Sum_probs=92.8
Q ss_pred CCEEEEEcCccCCC-----CCCcceeEEEeCCC--CceeccCCCC-----CcceeeeeeEe---CC--eEEEEcCCCCCC
Q 017349 129 QGKLFVLGGMRSDT-----ETPMQSTIMYRATT--NQWQLASPML-----TPRSFFASGNV---NG--KIMAVGGTGANI 191 (373)
Q Consensus 129 ~~~i~v~GG~~~~~-----~~~~~~~~~yd~~t--~~W~~~~~~~-----~~r~~~~~~~~---~~--~iyv~GG~~~~~ 191 (373)
++.+|+..|.-..+ ......+++||+.+ .+-+++.... ..-..|++... ++ +||++.-..
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~--- 136 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG--- 136 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST---
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC---
Confidence 67888776421110 01344789999874 3434433211 12344555553 23 577774331
Q ss_pred CCcCceEEEEeCCCCeEEeccCC---ccccccccEEEECCEEEEEeCc--cC---------CCccCCceEEEeCCCCcee
Q 017349 192 NETMTAVECYDPESDTWTTAAKL---RMGLARYDSAVMGSKMYVTEGW--TW---------PFMFSPRGGVYDINKDTWN 257 (373)
Q Consensus 192 ~~~~~~~~~yd~~t~~W~~~~~~---~~~~~~~~~~~~~~~lyv~gG~--~~---------~~~~~~~i~~yd~~~~~W~ 257 (373)
......++.+|+.++....+... +..+.+-..+.-+|.+|+-... .. .......+++||+. +.+
T Consensus 137 ~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~ 214 (355)
T 3sre_A 137 SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR 214 (355)
T ss_dssp TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCE
T ss_pred CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEE
Confidence 12233456667776665554332 2223333455568999986531 11 01223568888884 444
Q ss_pred ecccCccCCcceEEEE-ECC-eEEEEeeCCCcceEEEeCCC-CceeeecCCCCCCcccccceEEEEe--CCEEEEEe
Q 017349 258 LMSDGMKEGWTGISIV-LEG-KLFVISEHGDCPMKQYNPDD-DTWRYVGGDKFPCEVMHRPFAVNGV--EGKIYVVS 329 (373)
Q Consensus 258 ~~~~~~~~~~~~~~~~-~~~-~l~v~gg~~~~~~~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~~~~--~~~l~i~G 329 (373)
.+...+. ..+..+. -++ .+|+.... ...+++|+.+. ++.........+ ...-++... +|.||+..
T Consensus 215 ~~~~~l~--~pNGia~spDg~~lYvadt~-~~~I~~~~~~~~g~l~~~~~~~~~----g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 215 VVAEGFD--FANGINISPDGKYVYIAELL-AHKIHVYEKHANWTLTPLRVLSFD----TLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEEEEES--SEEEEEECTTSSEEEEEEGG-GTEEEEEEECTTSCEEEEEEEECS----SEEEEEEECTTTCCEEEEE
T ss_pred EeecCCc--ccCcceECCCCCEEEEEeCC-CCeEEEEEECCCCcEecCEEEeCC----CCCceEEEeCCCCcEEEEe
Confidence 3322111 1112122 244 67776543 56899999864 333332211222 223444443 37899854
No 350
>2l9b_B MRNA 3'-END-processing protein RNA14; 3' END mRNA maturation, transcription; NMR {Saccharomyces cerevisiae}
Probab=27.71 E-value=31 Score=20.41 Aligned_cols=20 Identities=25% Similarity=0.110 Sum_probs=15.5
Q ss_pred CCChHHHHHhhccCCccchhh
Q 017349 29 GLPDEIGELCLLHVPYPYQAL 49 (373)
Q Consensus 29 ~LP~dl~~~il~rlp~~~l~~ 49 (373)
.+|+|++ +.|.=||.+.+..
T Consensus 6 ~iP~eI~-dLL~vLPKRQYFK 25 (53)
T 2l9b_B 6 ELPTEVL-DLLSVIPKRQYFN 25 (53)
T ss_dssp CCCHHHH-HHHHHSBCGGGGC
T ss_pred CCCHHHH-HHHHHcchHhhhc
Confidence 4899998 6688889877653
No 351
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=24.39 E-value=3.2e+02 Score=23.04 Aligned_cols=122 Identities=11% Similarity=0.050 Sum_probs=61.1
Q ss_pred cCCEEEEEcCccCCCCCCcceeEEEeCCCCceeccCCCC-C----cceeeeeeEe-CCeEEEEcCCCCCCCCcCceEEEE
Q 017349 128 RQGKLFVLGGMRSDTETPMQSTIMYRATTNQWQLASPML-T----PRSFFASGNV-NGKIMAVGGTGANINETMTAVECY 201 (373)
Q Consensus 128 ~~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~----~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~y 201 (373)
.++++|+.......+ . ..++.++ +++-...+... . -...++++.. +++||++.-.. .......+.+|
T Consensus 26 ~~g~~~v~~~~~~~~--~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~--~~~~~~~i~~~ 98 (343)
T 2qe8_A 26 PDGRLFLSLHQFYQP--E-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGN--QSKSVPKLVAW 98 (343)
T ss_dssp TTSCEEEEECGGGCC--S-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHH--HHTSCCEEEEE
T ss_pred CCCCEEEEeCCCCCC--c-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCC--CcCCCCeEEEE
Confidence 378899885321111 1 3677777 44433222210 0 1122344443 47899975210 00013469999
Q ss_pred eCCCCeEEeccCCcc----cccc-ccEEEE--CCEEEEEeCccCCCccCCceEEEeCCCCc-eeec
Q 017349 202 DPESDTWTTAAKLRM----GLAR-YDSAVM--GSKMYVTEGWTWPFMFSPRGGVYDINKDT-WNLM 259 (373)
Q Consensus 202 d~~t~~W~~~~~~~~----~~~~-~~~~~~--~~~lyv~gG~~~~~~~~~~i~~yd~~~~~-W~~~ 259 (373)
|+.+++-...-.++. +... ...++- ++.+|+..... .....+.+||+.+++ |+.+
T Consensus 99 d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~---~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 99 DTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP---DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp ETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS---GGGCEEEEEETTTCCEEEEC
T ss_pred ECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc---CCCCeEEEEECCCCCEEEEe
Confidence 999887432212221 1111 233444 47888874310 012578999998665 5544
No 352
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.30 E-value=39 Score=21.56 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=20.1
Q ss_pred CCCCCChHHHHHhhccCCccchhhhhhhcHh
Q 017349 26 LIPGLPDEIGELCLLHVPYPYQALVRSVSYS 56 (373)
Q Consensus 26 ~~~~LP~dl~~~il~rlp~~~l~~~~~v~k~ 56 (373)
-+|.+|++|+.+|+..--..--..+..+.|.
T Consensus 20 rFPEvPd~VVsqc~~qN~~Nl~aC~~~L~qE 50 (75)
T 2dae_A 20 KFPEVPEVVVSRCMLQNNNNLDACCAVLSQE 50 (75)
T ss_dssp HSSSSCHHHHHHHHTTTTSCSHHHHHHHHHH
T ss_pred hcccCcHHHHHHHHHHhccCHHHHHHHHHHh
Confidence 3899999999999876544333333434443
No 353
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=24.05 E-value=2e+02 Score=25.13 Aligned_cols=52 Identities=10% Similarity=0.111 Sum_probs=32.5
Q ss_pred CCEEEEEeCccCCCccCCceEEEeCCC--CceeecccCccCCcceEEEEEC---CeEEEEeeC
Q 017349 227 GSKMYVTEGWTWPFMFSPRGGVYDINK--DTWNLMSDGMKEGWTGISIVLE---GKLFVISEH 284 (373)
Q Consensus 227 ~~~lyv~gG~~~~~~~~~~i~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~---~~l~v~gg~ 284 (373)
+|+|++.++.. ..+++-+-.- ++|+++..+.+.........++ +.|+|+|+.
T Consensus 287 ~g~l~~s~~~~------~~v~~~~~~g~~~~W~~~~~~~~~~Ys~~l~~~~~~~~~l~~~~~~ 343 (367)
T 2ydt_A 287 NGTIVVSCGTR------SEIFTNQALGDASAWKKWDVPQPTAYTRSLLTFQKDPDLLMIMGAG 343 (367)
T ss_dssp TCEEEEECSSC------SCEEEESSTTCTTCCEEECCSSCCCTTCEEEEETTEEEEEEEEECC
T ss_pred CCeEEEEcCCC------ceEEEECCCCCCCcceeccCCCCCCCCcceEecCCCCCEEEEecCc
Confidence 57898887632 2344432222 4899988766666666556664 368888754
No 354
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=22.22 E-value=3.9e+02 Score=23.27 Aligned_cols=151 Identities=8% Similarity=-0.001 Sum_probs=71.4
Q ss_pred CCEEEEEcCccCCCCCCcceeEEEeCCCCcee-ccCCCC-Ccceeee-eeEeCCeEEEEcCCCC-----CCCCcCceEEE
Q 017349 129 QGKLFVLGGMRSDTETPMQSTIMYRATTNQWQ-LASPML-TPRSFFA-SGNVNGKIMAVGGTGA-----NINETMTAVEC 200 (373)
Q Consensus 129 ~~~i~v~GG~~~~~~~~~~~~~~yd~~t~~W~-~~~~~~-~~r~~~~-~~~~~~~iyv~GG~~~-----~~~~~~~~~~~ 200 (373)
++.+++.|+.+ +.+.+||+.+++-. .+..-. ....... +..-++++.+.+..+. ........+..
T Consensus 192 ~~~~LaSgS~D-------~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 192 MQEALLGTTIM-------NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp STTEEEEEETT-------SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred CCceEEEecCC-------CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 55777777652 27899999998743 232100 0111111 1223666665543210 01223456777
Q ss_pred EeCCCCeEEecc--CCccccccc-cEEEECCEEEEEeCccCCCccCCceEEEeCCCCceee-cccCccCCcce-EEEEEC
Q 017349 201 YDPESDTWTTAA--KLRMGLARY-DSAVMGSKMYVTEGWTWPFMFSPRGGVYDINKDTWNL-MSDGMKEGWTG-ISIVLE 275 (373)
Q Consensus 201 yd~~t~~W~~~~--~~~~~~~~~-~~~~~~~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~-~~~~~~~~~~~-~~~~~~ 275 (373)
+|+.+..-..+- .+|...... .....++.+.+.|+.+ ..|.++|+.+++-.. +.. ....... .+..-+
T Consensus 265 Wd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~D------gTIkIWDl~tGk~l~tL~g-H~~~vvs~vafSPD 337 (356)
T 2w18_A 265 INPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTS------GTIAIWDLLLGQCTALLPP-VSDQHWSFVKWSGT 337 (356)
T ss_dssp EETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETT------SCEEEEETTTCSEEEEECC-C--CCCCEEEECSS
T ss_pred EECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCC------CcEEEEECCCCcEEEEecC-CCCCeEEEEEECCC
Confidence 898887643221 112222111 1111124455555554 578999999887433 221 1111111 112226
Q ss_pred CeEEEEeeCCCcceEEEeC
Q 017349 276 GKLFVISEHGDCPMKQYNP 294 (373)
Q Consensus 276 ~~l~v~gg~~~~~~~~yd~ 294 (373)
|+.++.|+. ...|.+||.
T Consensus 338 G~~LaSGS~-D~TIklWd~ 355 (356)
T 2w18_A 338 DSHLLAGQK-DGNIFVYHY 355 (356)
T ss_dssp SSEEEEECT-TSCEEEEEE
T ss_pred CCEEEEEEC-CCcEEEecC
Confidence 776666654 567777764
No 355
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=21.81 E-value=2.8e+02 Score=24.18 Aligned_cols=60 Identities=8% Similarity=-0.029 Sum_probs=34.4
Q ss_pred ceEEEeCCCCceee-cccCccCCcceEEEEECCe-EEEEeeCCCcceEEEeCCCCceeeecCCCCC
Q 017349 245 RGGVYDINKDTWNL-MSDGMKEGWTGISIVLEGK-LFVISEHGDCPMKQYNPDDDTWRYVGGDKFP 308 (373)
Q Consensus 245 ~i~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~-l~v~gg~~~~~~~~yd~~~~~W~~~~~~~~~ 308 (373)
.+.++|+.+++-.. ++ .+..-.+....-+++ +|+..+...+.+.++|..+ ++.+..++..
T Consensus 295 ~~~ViD~~t~~vv~~i~--vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t--~kvv~~I~vg 356 (368)
T 1mda_H 295 NTSSVTASVGQTSGPIS--NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS--DQDQSSVELD 356 (368)
T ss_dssp EEEEEESSSCCEEECCE--EEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS--CEEEEECCCC
T ss_pred CEEEEECCCCeEEEEEE--CCCCcceEEECCCCCEEEEEccCCCCeEEEEECCC--CcEEEEEECC
Confidence 35599998876322 22 222222222333555 7877663367999999865 5566554544
No 356
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=21.19 E-value=5.8e+02 Score=24.88 Aligned_cols=248 Identities=12% Similarity=0.150 Sum_probs=0.0
Q ss_pred ccCCCCEEEEEEecCCCCceeEEEeeCCCCCeeeCCCCCCCCCCCCCceEEEEeccC--CEEEEEcCccCCCCCCc----
Q 017349 73 LSLSLPYLFIFSFHKPTARIQWQALDPRSGRWFVLPPMPCPKAVCPQAFACTSLPRQ--GKLFVLGGMRSDTETPM---- 146 (373)
Q Consensus 73 ~~~~~~~l~~~gg~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~v~GG~~~~~~~~~---- 146 (373)
.....+.+|+.+.... +++-+-.-.+|..+...+.+...........++... +.+|+..| ...
T Consensus 23 ~p~~~~~~~a~~~~gg-----v~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g------~~~~~~~ 91 (789)
T 1sqj_A 23 HPKTKDLLYARTDIGG-----AYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQG------RYVGDEW 91 (789)
T ss_dssp CSSSTTCEEEEESSSC-----EEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEEC------SCTTSSC
T ss_pred CCCCCCEEEEEecCCC-----EEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeC------ccCCCcc
Q ss_pred ceeEEEeCCCCceeccCC-------CCCcceeeeeeEe---CCeEEEEc-CCCCCCCCcCceEEEEeCCCCeEEeccCCc
Q 017349 147 QSTIMYRATTNQWQLASP-------MLTPRSFFASGNV---NGKIMAVG-GTGANINETMTAVECYDPESDTWTTAAKLR 215 (373)
Q Consensus 147 ~~~~~yd~~t~~W~~~~~-------~~~~r~~~~~~~~---~~~iyv~G-G~~~~~~~~~~~~~~yd~~t~~W~~~~~~~ 215 (373)
..+++=+-.-.+|+++.. ++.....+.+++. .+.+|+.. ... +++=+=.-.+|+.+..++
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g---------l~~S~DgG~TW~~~~~~~ 162 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG---------IWKSSDRAKTWTNVTSIP 162 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC---------EEEESSTTSSCEEETTSC
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC---------EEEECCCCcccCCCccCc
Q ss_pred ---cccccccEEEEC----CEEEEEeCccCCCccCCceEEEeCCCCceeecccCccCCc------------------ceE
Q 017349 216 ---MGLARYDSAVMG----SKMYVTEGWTWPFMFSPRGGVYDINKDTWNLMSDGMKEGW------------------TGI 270 (373)
Q Consensus 216 ---~~~~~~~~~~~~----~~lyv~gG~~~~~~~~~~i~~yd~~~~~W~~~~~~~~~~~------------------~~~ 270 (373)
..-.......++ +.||+..... ..+++=.-.-.+|+.+. ..+... +..
T Consensus 163 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~~------~~v~~S~DgG~TW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (789)
T 1sqj_A 163 DAFTNGIGYTSVIFDPERNGTIYASATAP------QGMYVTHDGGVSWEPVA-GQPSSWLNRTTGAFPDKKPASIAPQPM 235 (789)
T ss_dssp CCCSTTTCEEEEEECTTSTTCEEEEESST------TCEEEESSTTSSCEECT-TCCCSCCHHHHHTSTTCCCSSSSCEEE
T ss_pred cccCCCCCeEEEEECCCCCCEEEEEEcCC------CeEEEEcCCCcCcccCC-CCcCccccccccccCccccccccccee
Q ss_pred EEEE-CCeEEEE--------eeCCCcceEEEeCCCCceeeecCCCC----------CCcccc---cceEEEEe---CCEE
Q 017349 271 SIVL-EGKLFVI--------SEHGDCPMKQYNPDDDTWRYVGGDKF----------PCEVMH---RPFAVNGV---EGKI 325 (373)
Q Consensus 271 ~~~~-~~~l~v~--------gg~~~~~~~~yd~~~~~W~~~~~~~~----------~~~~~~---~~~~~~~~---~~~l 325 (373)
.+.- ++.||+. +|. ...+++.+-...+|+.+...+. . . ....++.. .+.|
T Consensus 236 ~~~p~~~~l~~~~~~~~~p~~g~-~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~----~~~~g~~~lav~p~~~~~v 310 (789)
T 1sqj_A 236 KVALTPNFLYVTYADYPGPWGVT-FGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQT----FPAGGFCGLSVDATNPNRL 310 (789)
T ss_dssp EEEECSSEEEEEEESSCSSSCCC-CCCEEEEETTTCCEEECCCCTTTEESCCCSSCC----SCCCEEEEEEEETTEEEEE
T ss_pred EEcCCCCeEEEEEecCCCCCCCC-CceEEEEeCCCCceEECcCCCCccccccccccc----cccCceEEEEECCCCCCEE
Q ss_pred EEEeCCceeee---eEEEEeecCCcccceEEec
Q 017349 326 YVVSSGLNVAI---GRVYEEQNGGISAEWKVMT 355 (373)
Q Consensus 326 ~i~GG~~~~~~---~~~~~~~~d~~~~~W~~~~ 355 (373)
|+.+.... .. ..++. -+.....|+.+.
T Consensus 311 ~~~~~~~~-~~~~~~~l~~--S~DgG~tW~~~~ 340 (789)
T 1sqj_A 311 VVITLDRD-PGPALDSIYL--STDAGATWKDVT 340 (789)
T ss_dssp EEEEECCC-SCSSCCCEEE--ESSTTSSEEEHH
T ss_pred EEEEeccC-CCcccccEEE--ecCCCCCceeCc
No 357
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=20.87 E-value=3.9e+02 Score=22.77 Aligned_cols=72 Identities=10% Similarity=0.037 Sum_probs=39.0
Q ss_pred CCEEEEEeCccCC----CccCCceEEEeCCCCcee-ecccCccCCcceEEEEECC-eEEEEeeCCCcceEEEeCCCCcee
Q 017349 227 GSKMYVTEGWTWP----FMFSPRGGVYDINKDTWN-LMSDGMKEGWTGISIVLEG-KLFVISEHGDCPMKQYNPDDDTWR 300 (373)
Q Consensus 227 ~~~lyv~gG~~~~----~~~~~~i~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~~-~l~v~gg~~~~~~~~yd~~~~~W~ 300 (373)
++++|+....+.. ......+.++|+++++=. .++ ... -.+.+..-+| .||+.++ +.+.+||.++.+-+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~--~~~-p~~ia~spdg~~l~v~n~---~~v~v~D~~t~~l~ 338 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIP--GRD-ALSMTIDQQRNLMLTLDG---GNVNVYDISQPEPK 338 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEE--CTT-CCEEEEETTTTEEEEECS---SCEEEEECSSSSCE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEe--cCC-eeEEEECCCCCEEEEeCC---CeEEEEECCCCcce
Confidence 4789987541110 112357999999887632 222 222 1222222244 5665543 69999998876335
Q ss_pred eecC
Q 017349 301 YVGG 304 (373)
Q Consensus 301 ~~~~ 304 (373)
.+..
T Consensus 339 ~~~~ 342 (361)
T 2oiz_A 339 LLRT 342 (361)
T ss_dssp EEEE
T ss_pred eeEE
Confidence 5543
No 358
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=20.15 E-value=60 Score=18.69 Aligned_cols=22 Identities=27% Similarity=0.259 Sum_probs=16.5
Q ss_pred CCCCCCCChHHHHHhhccCCcc
Q 017349 24 QPLIPGLPDEIGELCLLHVPYP 45 (373)
Q Consensus 24 ~~~~~~LP~dl~~~il~rlp~~ 45 (373)
+.-+..||.||-+|+|+--...
T Consensus 18 ~eVF~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 18 QEVFKQLPADIQEEILSGKSRE 39 (48)
T ss_dssp GGGTTTSCHHHHHHHTTCCCSC
T ss_pred HHHHHHCcHHHHHHHHhcchHH
Confidence 6678888999888888755443
Done!