BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017352
(373 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 349 bits (896), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 239/341 (70%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 78
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 137
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY++
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 318 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 349 bits (895), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 96
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 155
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 336 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 349 bits (895), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 74
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 133
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 314 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 26 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 84
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 85 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 143
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 263
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 264 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 324 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 78
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 79 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 137
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 318 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 74
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 133
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 314 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 81
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 140
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 321 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 24 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 82
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 83 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 141
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 262 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 322 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 15 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 73
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 74 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 132
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 253 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 313 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 348 bits (894), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 347 bits (891), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 238/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAI+KI+ FE++ RTLRE+K+L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 347 bits (891), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/341 (50%), Positives = 237/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K Q L+NDH YFL+Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKC-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 346 bits (887), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 237/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 345 bits (886), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/345 (49%), Positives = 238/345 (68%), Gaps = 6/345 (1%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELK 81
+ F++ +Y I+ IG GAYG+V S+ R T ++VAIKKI NAF+ +A RTLRELK
Sbjct: 46 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 82 LLRHLQHENVIALKDVMMPS-HRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF 140
+L+H +H+N+IA+KD++ P+ FK VY+V +LM++DLHQII SSQ LT +H +YFL+
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY 165
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR---TSNGKNQ-FMTEYVVT 196
QLLRGLKY+HSA ++HRDLKP NLLVN NC+LKI DFG+AR TS ++Q FMTEYV T
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREE 256
RWYRAPEL+L Y +ID+WSVGCIF E+L R+ +FPG ++QL+LI+ +LG+
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285
Query: 257 DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
++ + + R YI+SLP P+ +YP A A+ LL +ML F+P+ RIS AL+H
Sbjct: 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345
Query: 317 PYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYH 360
P+++ +DP P P D D E+ E I+E ++ E+ +H
Sbjct: 346 PFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFH 390
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 345 bits (885), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 237/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 345 bits (884), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/345 (49%), Positives = 238/345 (68%), Gaps = 6/345 (1%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELK 81
+ F++ +Y I+ IG GAYG+V S+ R T ++VAIKKI NAF+ +A RTLRELK
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 82 LLRHLQHENVIALKDVMMPS-HRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF 140
+L+H +H+N+IA+KD++ P+ FK VY+V +LM++DLHQII SSQ LT +H +YFL+
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY 166
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR---TSNGKNQ-FMTEYVVT 196
QLLRGLKY+HSA ++HRDLKP NLLVN NC+LKI DFG+AR TS ++Q FMTEYV T
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREE 256
RWYRAPEL+L Y +ID+WSVGCIF E+L R+ +FPG ++QL+LI+ +LG+
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 286
Query: 257 DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
++ + + R YI+SLP P+ +YP A A+ LL +ML F+P+ RIS AL+H
Sbjct: 287 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 346
Query: 317 PYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYH 360
P+++ +DP P P D D E+ E I+E ++ E+ +H
Sbjct: 347 PFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFH 391
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 345 bits (884), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 237/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYXQRTLREIKILL 80
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 345 bits (884), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 237/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 343 bits (881), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 170/341 (49%), Positives = 236/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+ E V TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 343 bits (881), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 170/341 (49%), Positives = 236/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 81
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 140
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ + F+ E V TRWYRA
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 321 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 343 bits (880), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/341 (49%), Positives = 237/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 78
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 137
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCG 257
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY++
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 318 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 342 bits (878), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 171/341 (50%), Positives = 234/341 (68%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 96
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVYLV LM DL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILR 155
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR ++ + F+TEYV TRWYRA
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 336 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 342 bits (877), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/341 (49%), Positives = 236/341 (69%), Gaps = 6/341 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+K+L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLR 144
+HEN+I + D++ KDVY+V +LM+TDL++++K+ Q L+NDH YFL+Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKI DFGLAR ++ + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
N KAR Y+ SLP+ P++RL+P+A A+DLL KML F+P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
YDPS P A+ P DM+ ++ +E ++E++ +E + P
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 342 bits (877), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/345 (48%), Positives = 239/345 (69%), Gaps = 6/345 (1%)
Query: 26 FEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRH 85
F++ +Y ++ IG GAYG+V S+ + +VAIKKI+ FE++ RTLRE+++L
Sbjct: 39 FDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLREIQILLR 97
Query: 86 LQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
+HENVI ++D++ S +DVY+V +LM+TDL++++KS Q L+NDH YFL+Q+LRG
Sbjct: 98 FRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRG 156
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQ---FMTEYVVTRWYRAP 202
LKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR ++ ++ F+TE V TRWYRAP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ ILGS +EDL I
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
N KAR Y++SLP +++L+P + A+DLL +ML F+P KRI+V EAL HPY+
Sbjct: 277 NMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQY 336
Query: 323 YDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHPEAITA 366
YDP+ P A+ P M+ ++ +E ++E++ +E + P + A
Sbjct: 337 YDPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQPGVLEA 381
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 337 bits (864), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 158/306 (51%), Positives = 217/306 (70%), Gaps = 13/306 (4%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G GAYG+VCS+ ++ T E VAIKKI F+ + ALRTLRE+K+L+H +HEN+I + ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
P NF +VY++ ELM TDLH++I S+Q L++DH QYF++Q LR +K LH +N++HR
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSN----------GKNQFMTEYVVTRWYRAPELLLC 207
DLKP NLL+N+NCDLK+CDFGLAR + G+ MTEYV TRWYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLT 196
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGS-RREEDLEFIDNPKA 266
Y ++DVWS GCI AEL R+PIFPG + +QL LI I+G+ + DL I++P+A
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 267 RKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPS 326
R+YIKSLP P P +++P +P IDLLQ+MLVFDP KRI+ EAL+HPY+ +DP+
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 327 SNPPAQ 332
P +
Sbjct: 317 DEPEGE 322
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 333 bits (855), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 157/306 (51%), Positives = 216/306 (70%), Gaps = 13/306 (4%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G GAYG+VCS+ ++ T E VAIKKI F+ + ALRTLRE+K+L+H +HEN+I + ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
P NF +VY++ ELM TDLH++I S+Q L++DH QYF++Q LR +K LH +N++HR
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSN----------GKNQFMTEYVVTRWYRAPELLLC 207
DLKP NLL+N+NCDLK+CDFGLAR + G+ MTE V TRWYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLT 196
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGS-RREEDLEFIDNPKA 266
Y ++DVWS GCI AEL R+PIFPG + +QL LI I+G+ + DL I++P+A
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 267 RKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPS 326
R+YIKSLP P P +++P +P IDLLQ+MLVFDP KRI+ EAL+HPY+ +DP+
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 327 SNPPAQ 332
P +
Sbjct: 317 DEPEGE 322
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 333 bits (855), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 156/306 (50%), Positives = 216/306 (70%), Gaps = 13/306 (4%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G GAYG+VCS+ ++ T E VAIKKI F+ + ALRTLRE+K+L+H +HEN+I + ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
P NF +VY++ ELM TDLH++I S+Q L++DH QYF++Q LR +K LH +N++HR
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSN----------GKNQFMTEYVVTRWYRAPELLLC 207
DLKP NLL+N+NCDLK+CDFGLAR + G+ M E+V TRWYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGS-RREEDLEFIDNPKA 266
Y ++DVWS GCI AEL R+PIFPG + +QL LI I+G+ + DL I++P+A
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 267 RKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPS 326
R+YIKSLP P P +++P +P IDLLQ+MLVFDP KRI+ EAL+HPY+ +DP+
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 327 SNPPAQ 332
P +
Sbjct: 317 DEPEGE 322
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 320 bits (819), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/341 (46%), Positives = 233/341 (68%), Gaps = 7/341 (2%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ + ++P+G GAYG VCS+ + +KVA+KK++ F++ + A RT REL+L
Sbjct: 13 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 72
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+HL+HENVI L DV P+ +F +VYLV LM DL+ I+K QAL+++H Q+ ++Q
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQ 131
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
LLRGLKY+HSA I+HRDLKP N+ VN +C+L+I DFGLAR ++ + MT YV TRWYRA
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE---MTGYVATRWYRA 188
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL K +FPG++ ++QLK I+ ++G+ E L I
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 248
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SLP P S ++ A+PLAIDLL +MLV D +R+S EAL H Y S
Sbjct: 249 SSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHYHP 361
+DP P A+ P D ++ +E E +E+ +E+L + P
Sbjct: 309 YHDPEDEPEAE-PYDESVEAKERTLEEWKELTYQEVLSFKP 348
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 153
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 210
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 331 YHDPDDEPVA 340
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 319 bits (818), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 143
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 200
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 260
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 261 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 321 YHDPDDEPVA 330
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 319 bits (817), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 152
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 209
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 270 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 330 YHDPDDEPVA 339
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 319 bits (817), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 257 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 317 YHDPDDEPVA 326
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 319 bits (817), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 318 bits (816), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 318 bits (816), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 186
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 307 YHDPDDEPVA 316
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 318 YHDPDDEPVA 327
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 317 YHDPDDEPVA 326
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 202
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 323 YHDPDDEPVA 332
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/315 (49%), Positives = 221/315 (70%), Gaps = 6/315 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPAQVPID 336
+DP P A P D
Sbjct: 311 YHDPDDEPVAD-PFD 324
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 313 YHDPDDEPVA 322
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 202
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 323 YHDPDDEPVA 332
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 202
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 323 YHDPDDEPVA 332
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 144
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 201
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 322 YHDPDDEPVA 331
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 313 YHDPDDEPVA 322
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 318 bits (815), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 156
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 213
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 334 YHDPDDEPVA 343
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 317 YHDPDDEPVA 326
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 316 YHDPDDEPVA 325
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 158/329 (48%), Positives = 225/329 (68%), Gaps = 8/329 (2%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 322 LYDPSSNPPAQVPIDLDMDEESGEEMIRE 350
+DP P A D ES + +I E
Sbjct: 318 YHDPDDEPVAD---PYDQSSESRDLLIDE 343
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 316 YHDPDDEPVA 325
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 132
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 189
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 249
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 250 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 310 YHDPDDEPVA 319
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 153
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 210
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 271 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 331 YHDPDDEPVA 340
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 34 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 93
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 94 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 152
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 209
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 269
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 270 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 330 YHDPDDEPVA 339
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 317 bits (813), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 220/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K ++ LT+DH Q+ ++Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK-LTDDHVQFLIYQ 129
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 186
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 307 YHDPDDEPVA 316
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 317 bits (813), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 130
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 187
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 308 YHDPDDEPVA 317
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 317 bits (813), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 313 YHDPDDEPVA 322
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/311 (49%), Positives = 219/311 (70%), Gaps = 5/311 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VCSS + ++ K+A+KK++ F++ + A RT REL+L
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 162
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 219
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ +NQL+ I+ + G+ + +
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRM 279
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ +AR YI SLP P F+ ++ A+PLA+DLL+KMLV D KRI+ +EAL HPY S
Sbjct: 280 PSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
Query: 322 LYDPSSNPPAQ 332
+DP P ++
Sbjct: 340 YHDPDDEPESE 350
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 130
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 187
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 308 YHDPDDEPVA 317
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 186
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 307 YHDPDDEPVA 316
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 318 YHDPDDEPVA 327
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 317 bits (812), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 318 YHDPDDEPVA 327
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 317 bits (812), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 131
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGYVATRWYRA 188
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 248
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 249 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 309 YHDPDDEPVA 318
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 317 bits (811), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 232/339 (68%), Gaps = 7/339 (2%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ + ++P+G GAYG VCS+ + +KVA+KK++ F++ + A RT REL+L
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+HL+HENVI L DV P+ +F +VYLV LM DL+ I+KS QAL+++H Q+ ++Q
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS-QALSDEHVQFLVYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
LLRGLKY+HSA I+HRDLKP N+ VN + +L+I DFGLAR ++ + MT YV TRWYRA
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE---MTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL K +FPG++ ++QLK I+ ++G+ E L I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SLP P S ++ A+PLAIDLL +MLV D +R+S EAL H Y S
Sbjct: 257 SSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHY 359
+DP P A+ P D ++ +E E +E+ +E+L +
Sbjct: 317 YHDPEDEPEAE-PYDESVEAKERTLEEWKELTYQEVLSF 354
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 316 bits (810), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 156
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + M YV TRWYRA
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MXGYVATRWYRA 213
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 334 YHDPDDEPVA 343
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 316 bits (810), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 219/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI D+GLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 316 bits (810), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 229/353 (64%), Gaps = 7/353 (1%)
Query: 11 IRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENR 70
IR G + + +T +E+ YV +G GAYG VCS++++ + EKVAIKK++ F++
Sbjct: 23 IRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE 82
Query: 71 VDALRTLRELKLLRHLQHENVIALKDVMMP-SHRRNFKDVYLVYELMDTDLHQIIKSSQA 129
+ A R REL LL+H+QHENVI L DV P S RNF D YLV M TDL +I+
Sbjct: 83 IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM--GME 140
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
+ + QY ++Q+L+GLKY+HSA ++HRDLKPGNL VN +C+LKI DFGLAR ++ +
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 197
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINI 249
MT YVVTRWYRAPE++L +Y ++D+WSVGCI AE+L K +F G + L+QL I+ +
Sbjct: 198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 257
Query: 250 LGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRIS 309
G E ++ +++ A+ YI+SLP TP F++L+P A P A DLL+KML D KR++
Sbjct: 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 317
Query: 310 VTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYHP 361
+AL HP+ P DP AQ P D ++ E + ++ + KE++++ P
Sbjct: 318 AAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 370
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 316 bits (810), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + M +V TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 316 bits (810), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + M +V TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 316 bits (809), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 229/353 (64%), Gaps = 7/353 (1%)
Query: 11 IRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENR 70
IR G + + +T +E+ YV +G GAYG VCS++++ + EKVAIKK++ F++
Sbjct: 5 IRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE 64
Query: 71 VDALRTLRELKLLRHLQHENVIALKDVMMP-SHRRNFKDVYLVYELMDTDLHQIIKSSQA 129
+ A R REL LL+H+QHENVI L DV P S RNF D YLV M TDL +I+
Sbjct: 65 IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM--GLK 122
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
+ + QY ++Q+L+GLKY+HSA ++HRDLKPGNL VN +C+LKI DFGLAR ++ +
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 179
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINI 249
MT YVVTRWYRAPE++L +Y ++D+WSVGCI AE+L K +F G + L+QL I+ +
Sbjct: 180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 239
Query: 250 LGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRIS 309
G E ++ +++ A+ YI+SLP TP F++L+P A P A DLL+KML D KR++
Sbjct: 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 299
Query: 310 VTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES-GEEMIREMMLKEMLHYHP 361
+AL HP+ P DP AQ P D ++ E + ++ + KE++++ P
Sbjct: 300 AAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 352
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DF LAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 315 bits (807), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + M +V TRWYRA
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MAGFVATRWYRA 186
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 307 YHDPDDEPVA 316
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 315 bits (807), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI FGLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 315 bits (807), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI D GLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 153/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + PIG GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 316 YHDPDDEPVA 325
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 313 YHDPDDEPVA 322
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 315 bits (806), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+KS Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGL R ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 315 bits (806), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE---MTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 317 YHDPDDEPVA 326
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI D GLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + MT V TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MTGXVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 314 bits (805), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI D GLAR ++ + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE---MTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 314 bits (805), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 26 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 85
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 86 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 144
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRA 201
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 261
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 262 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 322 YHDPDDEPVA 331
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 314 bits (805), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 218/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR ++ + MT YV TRWYRA
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE---MTGYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 316 YHDPDDEPVA 325
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 314 bits (804), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 151/310 (48%), Positives = 217/310 (70%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ + A RT REL+L
Sbjct: 35 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 94
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P+ F DVYLV LM DL+ I+K Q LT+DH Q+ ++Q
Sbjct: 95 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 153
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR ++ + M V TRWYRA
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---MXGXVATRWYRA 210
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL + +FPGT+ ++QLKLI+ ++G+ E L+ I
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 270
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SL P F+ ++ A+PLA+DLL+KMLV D KRI+ +AL H Y +
Sbjct: 271 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Query: 322 LYDPSSNPPA 331
+DP P A
Sbjct: 331 YHDPDDEPVA 340
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 314 bits (804), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 158/339 (46%), Positives = 231/339 (68%), Gaps = 7/339 (2%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T++E+ + ++P+G GAYG VCS+ + +KVA+KK++ F++ + A RT REL+L
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+HL+HENVI L DV P+ +F +VYLV LM DL+ I+K QAL+++H Q+ ++Q
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
LLRGLKY+HSA I+HRDLKP N+ VN + +L+I DFGLAR ++ + MT YV TRWYRA
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE---MTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L +Y ++D+WSVGCI AELL K +FPG++ ++QLK I+ ++G+ E L I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ AR YI+SLP P S ++ A+PLAIDLL +MLV D +R+S EAL H Y S
Sbjct: 257 SSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
Query: 322 LYDPSSNPPAQVPIDLDMD-EESGEEMIREMMLKEMLHY 359
+DP P A+ P D ++ +E E +E+ +E+L +
Sbjct: 317 YHDPEDEPEAE-PYDESVEAKERTLEEWKELTYQEVLSF 354
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/340 (42%), Positives = 218/340 (64%), Gaps = 5/340 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+T +E+ Y ++P+G GAYG VCS+V+ T KVAIKK+ F++ + A R REL+L
Sbjct: 18 KTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL 77
Query: 83 LRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L+H++HENVI L DV P +F D YLV M TDL +++K + L D Q+ ++Q
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK-LGEDRIQFLVYQ 136
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
+L+GL+Y+H+A I+HRDLKPGNL VN +C+LKI DFGLAR ++ + M VVTRWYRA
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MXGXVVTRWYRA 193
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PE++L Y ++D+WSVGCI AE++ K +F G++ L+QLK I+ + G+ E ++ +
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
+ +A+ Y+K LP F+ + +A PLA++LL+KMLV D +R++ EAL HPY
Sbjct: 254 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313
Query: 322 LYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLHYHP 361
L+D P Q D D + + + + KE+L + P
Sbjct: 314 LHDTEDEPQVQKYDDSFDDVDRTLDEWKRVTYKEVLSFKP 353
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 271 bits (693), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/404 (37%), Positives = 221/404 (54%), Gaps = 64/404 (15%)
Query: 19 YSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR 78
+S WQ I +Y IG G+YG VC + ++ VAIKKI FE+ +D R LR
Sbjct: 46 HSDWQ----IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR 101
Query: 79 ELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYF 138
E+ +L L H++V+ + D+++P F ++Y+V E+ D+D ++ ++ LT H +
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTL 161
Query: 139 LFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART----SNGKNQF----- 189
L+ LL G+KY+HSA ILHRDLKP N LVN +C +K+CDFGLART NG +Q
Sbjct: 162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR 221
Query: 190 ------------------MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLG-- 229
+T +VVTRWYRAPEL+L +NY +IDVWS+GCIFAELL
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281
Query: 230 ---------RKPIFPGTECL--------------------NQLKLIINILGSRREEDLEF 260
R P+FPG+ C +QL +I NILG+ EED+E
Sbjct: 282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEA 341
Query: 261 IDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
++ A++YI+ P GT + +P + AI LL++MLVF+P KRI++ E L HP+
Sbjct: 342 LEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFK 401
Query: 321 P--LYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLHYHPE 362
+ + +N +V + + E +R +KE+ YHPE
Sbjct: 402 EVRIAEVETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQRYHPE 445
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 271 bits (692), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 219/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 270 bits (690), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 219/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 216/350 (61%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VA+KK++ F+N+ A R REL LL
Sbjct: 16 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLL 75
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I L ++ Y L+Q+
Sbjct: 76 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LDHERMSYLLYQM 133
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART++ N MT YVVTR+YRAP
Sbjct: 134 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS-TNFMMTPYVVTRYYRAP 192
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI EL+ IF GT+ ++Q +I LG+ E + +
Sbjct: 193 EVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAAL- 250
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPD------------AHPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P PG F L+PD A DLL KMLV DP KRISV
Sbjct: 251 QPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 310
Query: 311 TEALQHPYMSPLYDP--SSNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EAL+HPY++ YDP + PP Q+ D ++E E E +E++ KE++
Sbjct: 311 DEALRHPYITVWYDPAEAEAPPPQI-YDAQLEEREHAIEEWKELIYKEVM 359
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 218/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 56 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 115
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 173
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 232
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 233 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 290
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 351 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 400
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 56 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 115
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 173
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 232
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 233 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 290
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 350
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 351 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 400
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 78
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 136
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 195
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 196 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 253
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 254 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 313
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 314 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 363
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 313 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 362
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 17 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 76
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 77 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 134
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 135 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 193
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 194 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 251
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 252 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 311
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 312 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 361
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 219/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 78
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 79 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQM 136
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 195
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I LG+ E ++ +
Sbjct: 196 EVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL- 253
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 313
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 314 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 362
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 78
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 136
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 195
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 196 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 253
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 254 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 313
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 314 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 363
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 268 bits (685), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 218/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 268 bits (685), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 313 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 362
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 268 bits (685), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 219/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 268 bits (685), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 11 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 70
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQM 128
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 129 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 187
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 188 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 245
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 306 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 355
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 268 bits (684), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 71
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQM 129
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 188
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 189 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 246
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 247 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 307 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 356
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 268 bits (684), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 222/351 (63%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 71
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME--LDHERMSYLLYQM 129
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 188
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 189 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 246
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 247 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 306
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 307 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 356
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 268 bits (684), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 216/352 (61%), Gaps = 22/352 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VA+KK++ F+N+ A R REL LL
Sbjct: 18 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLL 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I L ++ Y L+Q+
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME--LDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ N MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-CTNFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI EL+ IF GT+ ++Q +I LG+ E + +
Sbjct: 195 EVILGM-GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAAL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPD------------AHPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P PG F L+PD A DLL KMLV DP KRISV
Sbjct: 253 QPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 312
Query: 311 TEALQHPYMSPLYDP--SSNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLHY 359
EAL+HPY++ YDP + PP Q+ D ++E E E +E++ KE++ +
Sbjct: 313 DEALRHPYITVWYDPAEAEAPPPQI-YDAQLEEREHAIEEWKELIYKEVMDW 363
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 268 bits (684), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/351 (42%), Positives = 221/351 (62%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 313 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 362
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 267 bits (683), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 218/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 267 bits (682), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/351 (42%), Positives = 221/351 (62%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 313 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 362
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 267 bits (682), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 219/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 23 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 82
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 83 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQM 140
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 141 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 199
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 200 EVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 257
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 258 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 317
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 318 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 366
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 267 bits (682), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/351 (42%), Positives = 221/351 (62%), Gaps = 22/351 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 11 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 70
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME--LDHERMSYLLYQM 128
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 129 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 187
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 188 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 245
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ PP Q+ D +DE E E +E++ KE+++
Sbjct: 306 DDALQHPYINVWYDPAEVEAPPPQI-YDKQLDEREHTIEEWKELIYKEVMN 355
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 219/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 71
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 72 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQM 129
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 188
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 189 EVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 246
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 247 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 306
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 307 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 355
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 217/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVG I E++ +FPGT+ ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 265 bits (678), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 223/359 (62%), Gaps = 24/359 (6%)
Query: 17 HYYS--MWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL 74
++YS + + F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A
Sbjct: 11 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 70
Query: 75 RTLRELKLLRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTND 133
R REL L++ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++
Sbjct: 71 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHE 128
Query: 134 HCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY 193
Y L+Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + M +
Sbjct: 129 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMVPF 187
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSR 253
VVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I LG+
Sbjct: 188 VVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 246
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLV 301
E ++ + P R Y+++ P G F +L+PD A DLL KMLV
Sbjct: 247 CPEFMKKL-QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 305
Query: 302 FDPTKRISVTEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
D +KRISV EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 306 IDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 363
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 265 bits (677), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 225/369 (60%), Gaps = 24/369 (6%)
Query: 17 HYYS--MWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL 74
++YS + + F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 68
Query: 75 RTLRELKLLRHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTND 133
R REL L++ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHE 126
Query: 134 HCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY 193
Y L+Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + MT
Sbjct: 127 RMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPE 185
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSR 253
VVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I LG+
Sbjct: 186 VVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLV 301
E ++ + P R Y+++ P G F +L+PD A DLL KMLV
Sbjct: 245 CPEFMKKL-QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLV 303
Query: 302 FDPTKRISVTEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEMLH 358
D +KRISV EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 304 IDASKRISVDEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVMD 362
Query: 359 YHPEAITAN 367
T N
Sbjct: 363 LPKRPTTLN 371
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 263 bits (673), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 216/350 (61%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIV ++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVG I E++ +FPGT+ ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 217/350 (62%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + M VVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMEPEVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 261 bits (666), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 211/379 (55%), Gaps = 52/379 (13%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IGRG+YG V + ++ T + VAIKK+N FE+ +D R LRE+ +L L+ + +I L D+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
++P F ++Y+V E+ D+DL ++ K+ LT +H + L+ LL G ++H + I+HR
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHR 153
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSNGK----------------------NQFMTEYVV 195
DLKP N L+N +C +K+CDFGLART N + + +T +VV
Sbjct: 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV 213
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL-----------GRKPIFPGTECL---- 240
TRWYRAPEL+L +NY SID+WS GCIFAELL R P+FPG+ C
Sbjct: 214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSP 273
Query: 241 -------------NQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPD 287
+QL +I NI+G+ E+DL+ I+ P+ KYIK P+ + YP
Sbjct: 274 DRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPS 333
Query: 288 AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES--GE 345
I+LL+ ML F+P KRI++ +AL HPY+ + + I L D+ E
Sbjct: 334 ISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFDDWMVLSE 393
Query: 346 EMIREMMLKEMLHYHPEAI 364
+R + LKE+ +HPE +
Sbjct: 394 TQLRYIFLKEVQSFHPELV 412
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 260 bits (665), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 146/348 (41%), Positives = 216/348 (62%), Gaps = 25/348 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 311 TEALQHPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEMLH 358
+ALQHPY++ YDP+ D E + EE +E++ KE+++
Sbjct: 313 DDALQHPYINVWYDPAXXXXX------DEREHTIEEW-KELIYKEVMN 353
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 216/350 (61%), Gaps = 22/350 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I L +V P F+DVY+V ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G + M VVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMEPEVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD A DLL KMLV D +KRISV
Sbjct: 253 QPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 311 TEALQHPYMSPLYDPS--SNPPAQVPIDLDMDE-ESGEEMIREMMLKEML 357
EALQHPY++ YDPS PP ++P D +DE E E +E++ KE++
Sbjct: 313 DEALQHPYINVWYDPSEAEAPPPKIP-DKQLDEREHTIEEWKELIYKEVM 361
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/337 (42%), Positives = 205/337 (60%), Gaps = 42/337 (12%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ-HE 89
KY +K +G+GAYGIV S++R T E VA+KKI +AF+N DA RT RE+ +L L HE
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYL 149
N++ L +V+ + R DVYLV++ M+TDLH +I+++ L H QY ++QL++ +KYL
Sbjct: 70 NIVNLLNVLRADNDR---DVYLVFDYMETDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYL 125
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLART----------------SNGKN-----Q 188
HS +LHRD+KP N+L+NA C +K+ DFGL+R+ N +N
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 189 FMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
+T+YV TRWYRAPE+LL Y ID+WS+GCI E+L KPIFPG+ +NQL+ II
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 249 ILGSRREEDLEFIDNPKARKYIKSLPYTPG----------TPFSRLY------PDAHPLA 292
++ ED+E I +P A+ I+SL T + L D + A
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA 305
Query: 293 IDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNP 329
+DLL K+L F+P KRIS +AL+HP++S ++P+ P
Sbjct: 306 LDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 206/382 (53%), Gaps = 55/382 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IGRG+YG V + ++ N+ VAIKK+N FE+ +D R LRE+ +L L+ + +I L D+
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDL 95
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
++P F ++Y+V E+ D+DL ++ K+ LT H + L+ LL G K++H + I+HR
Sbjct: 96 IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHR 155
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSNGKNQF-------------------------MTE 192
DLKP N L+N +C +KICDFGLART N +T
Sbjct: 156 DLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTS 215
Query: 193 YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL-----------GRKPIFPGTECL- 240
+VVTRWYRAPEL+L +NY SID+WS GCIFAELL R P+FPG+ C
Sbjct: 216 HVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFP 275
Query: 241 ----------------NQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRL 284
+QL +I N++G+ EEDL+ I + KYIK P G S+
Sbjct: 276 LSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKK 335
Query: 285 YPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEES- 343
Y IDLL+ ML F+ KRI++ +AL HPY+ + + + I L D+
Sbjct: 336 YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFSTEKIILPFDDWMV 395
Query: 344 -GEEMIREMMLKEMLHYHPEAI 364
E +R + LKE+ +H + I
Sbjct: 396 LSETQLRYIFLKEIQSFHADLI 417
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 137/313 (43%), Positives = 199/313 (63%), Gaps = 18/313 (5%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLL 83
+ F + +Y +KPIG GA GIVC++ + + VAIKK++ F+N+ A R REL L+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHLQHENVIALKDVMMPSHR-RNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ + H+N+I+L +V P F+DVYLV ELMD +L Q+I+ L ++ Y L+Q+
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G + MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I LG+ E ++ +
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL- 252
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDA------------HPLAIDLLQKMLVFDPTKRISV 310
P R Y+++ P G F +L+PD+ A DLL KMLV DP KRISV
Sbjct: 253 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 312
Query: 311 TEALQHPYMSPLY 323
+ALQHPY++ Y
Sbjct: 313 DDALQHPYINVWY 325
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 241 bits (614), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 183/312 (58%), Gaps = 13/312 (4%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFEN--RVDAL-------R 75
L + + Y + I G+YG VC+ V+ E VAIK++ N + V+ L R
Sbjct: 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 76 TLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ-ALTNDH 134
LRE++LL H H N++ L+D+ + +YLV ELM TDL Q+I + ++ H
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYV 194
QYF++ +L GL LH A ++HRDL PGN+L+ N D+ ICDF LAR T YV
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN-KTHYV 194
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRR 254
RWYRAPEL++ + +D+WS GC+ AE+ RK +F G+ NQL I+ ++G+ +
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 255 EEDLEFIDNPKARKYIK-SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
ED+ +P AR Y++ SL P ++ + P A P+A+DL+ KML F+P +RIS +A
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 314 LQHPYMSPLYDP 325
L+HPY L+DP
Sbjct: 315 LRHPYFESLFDP 326
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 240 bits (613), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 124/312 (39%), Positives = 183/312 (58%), Gaps = 13/312 (4%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFEN--RVDAL-------R 75
L + + Y + I G+YG VC+ V+ E VAIK++ N + V+ L R
Sbjct: 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 76 TLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ-ALTNDH 134
LRE++LL H H N++ L+D+ + +YLV ELM TDL Q+I + ++ H
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYV 194
QYF++ +L GL LH A ++HRDL PGN+L+ N D+ ICDF LAR T YV
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN-KTHYV 194
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRR 254
RWYRAPEL++ + +D+WS GC+ AE+ RK +F G+ NQL I+ ++G+ +
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 255 EEDLEFIDNPKARKYIK-SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
ED+ +P AR Y++ SL P ++ + P A P+A+DL+ KML F+P +RIS +A
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 314 LQHPYMSPLYDP 325
L+HPY L+DP
Sbjct: 315 LRHPYFESLFDP 326
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 192/317 (60%), Gaps = 17/317 (5%)
Query: 26 FEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRH 85
F++ ++Y+ +KP+G G G+V S+V+ + +++VAIKKI + LRE+K++R
Sbjct: 7 FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRR 64
Query: 86 LQHENVIALKDVMMPSHRRNFKDV---------YLVYELMDTDLHQIIKSSQALTNDHCQ 136
L H+N++ + +++ PS + DV Y+V E M+TDL +++ L +H +
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG-PLLEEHAR 123
Query: 137 YFLFQLLRGLKYLHSANILHRDLKPGNLLVNA-NCDLKICDFGLARTSN---GKNQFMTE 192
F++QLLRGLKY+HSAN+LHRDLKP NL +N + LKI DFGLAR + ++E
Sbjct: 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 193 YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGS 252
+VT+WYR+P LLL +NY +ID+W+ GCIFAE+L K +F G L Q++LI+ +
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243
Query: 253 RREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
EED + + + YI++ P P ++L P A+D L+++L F P R++ E
Sbjct: 244 VHEEDRQELLS-VIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEE 302
Query: 313 ALQHPYMSPLYDPSSNP 329
AL HPYMS P P
Sbjct: 303 ALSHPYMSIYSFPMDEP 319
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 169/297 (56%), Gaps = 9/297 (3%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY ++ IG G YG V + NRET+E VA+K++ ++ LRE+ LL+ L+H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQA-LTNDHCQYFLFQLLRGLKYL 149
++ L DV+ K + LV+E D DL + S L + + FLFQLL+GL +
Sbjct: 63 IVRLHDVLHSD-----KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
HS N+LHRDLKP NLL+N N +LK+ DFGLAR + + VVT WYR P++L
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 210 NYGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
Y TSID+WS GCIFAEL +P+FPG + +QLK I +LG+ EE ++ K
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEE--QWPSMTKLPD 235
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
Y Y T + P + DLLQ +L +P +RIS EALQHPY S P
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/308 (40%), Positives = 174/308 (56%), Gaps = 14/308 (4%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRV-DALR--TLRELKLLRHLQ 87
+Y + +G G + V + ++ TN+ VAIKKI + D + LRE+KLL+ L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIK-SSQALTNDHCQYFLFQLLRGL 146
H N+I L D H+ N + LV++ M+TDL IIK +S LT H + ++ L+GL
Sbjct: 71 HPNIIGLLDAF--GHKSN---ISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
+YLH ILHRDLKP NLL++ N LK+ DFGLA++ N+ VVTRWYRAPELL
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
YG +D+W+VGCI AELL R P PG L+QL I LG+ EE ++ D
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEE--QWPDMCSL 243
Query: 267 RKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPS 326
Y+ + PG P ++ A +DL+Q + +F+P RI+ T+AL+ Y S P
Sbjct: 244 PDYV-TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS--NRPG 300
Query: 327 SNPPAQVP 334
P Q+P
Sbjct: 301 PTPGCQLP 308
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 169/297 (56%), Gaps = 9/297 (3%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY ++ IG G YG V + NRET+E VA+K++ ++ LRE+ LL+ L+H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQA-LTNDHCQYFLFQLLRGLKYL 149
++ L DV+ K + LV+E D DL + S L + + FLFQLL+GL +
Sbjct: 63 IVRLHDVLHSD-----KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
HS N+LHRDLKP NLL+N N +LK+ +FGLAR + + VVT WYR P++L
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 210 NYGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
Y TSID+WS GCIFAEL +P+FPG + +QLK I +LG+ EE ++ K
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEE--QWPSMTKLPD 235
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
Y Y T + P + DLLQ +L +P +RIS EALQHPY S P
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 75 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 188
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 246
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 300
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 69 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 240
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 67 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 238
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 72 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 243
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 67 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 238
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 167/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E +D DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 71 LDVI---HTEN--KLYLVFEHVDQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 242
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 71 LDVI---HTEN--KLYLVFEFLSMDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 242
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 204 bits (518), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 70 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 241
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 204 bits (518), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 69 LDVI---HTEN--KLYLVFEFLSMDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 240
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 204 bits (518), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 72 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 126 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 243
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 204 bits (518), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 67 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 238
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 71 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 242
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 70 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 241
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 67 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 238
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+ KI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 71 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 242
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+ KI E +RE+ LL+ L H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 67 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 238
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 69 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 240
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 70 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 124 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 241
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 25/305 (8%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY ++ +G G YG+V + + + VA+K+I E+ +RE+ LL+ L H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ-ALTNDHCQYFLFQLLRGLKYL 149
+++L DV+ + + LV+E M+ DL +++ ++ L + + +L+QLLRG+ +
Sbjct: 81 IVSLIDVIHSE-----RCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
H ILHRDLKP NLL+N++ LK+ DFGLAR + T VVT WYRAP++L+
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 210 NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
Y TS+D+WS+GCIFAE++ KP+FPG +QL I +ILG+ NP+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT---------PNPREWPQ 246
Query: 270 IKSLPYTP--------GTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
++ LP P+S + P IDLL ML FDP KRIS +A+ HPY
Sbjct: 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Query: 322 LYDPS 326
L DP
Sbjct: 307 L-DPQ 310
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 69 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 123 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 240
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 165/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + +S ALT + +LFQLL+GL + HS
Sbjct: 70 LDVI---HTEN--KLYLVFEFLSMDLKDFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 124 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 241
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 172/304 (56%), Gaps = 25/304 (8%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY ++ +G G YG+V + + + VA+K+I E+ +RE+ LL+ L H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ-ALTNDHCQYFLFQLLRGLKYL 149
+++L DV+ + + LV+E M+ DL +++ ++ L + + +L+QLLRG+ +
Sbjct: 81 IVSLIDVIHSE-----RCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
H ILHRDLKP NLL+N++ LK+ DFGLAR + T VVT WYRAP++L+
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 210 NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
Y TS+D+WS+GCIFAE++ KP+FPG +QL I +ILG+ NP+
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT---------PNPREWPQ 246
Query: 270 IKSLPYTP--------GTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
++ LP P+S + P IDLL ML FDP KRIS +A+ HPY
Sbjct: 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
Query: 322 LYDP 325
L DP
Sbjct: 307 L-DP 309
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 69 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 123 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 240
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 165/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + +S ALT + +LFQLL+GL + HS
Sbjct: 71 LDVI---HTEN--KLYLVFEFLSMDLKDFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 242
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 165/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + +S ALT + +LFQLL+GL + HS
Sbjct: 71 LDVI---HTEN--KLYLVFEFLHQDLKTFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 242
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + +S ALT + +LFQLL+GL + HS
Sbjct: 67 LDVI---HTEN--KLYLVFEHVHQDLKTFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 238
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 165/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKDFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 122 HRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 75 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL Y
Sbjct: 129 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 188
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 189 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 246
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 300
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 164/288 (56%), Gaps = 11/288 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
S P FS++ P LL +ML +DP KRIS AL HP+
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 166/294 (56%), Gaps = 11/294 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG G YG+V + N+ T E VA+KKI E +RE+ LL+ L H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN---DHCQYFLFQLLRGLKYLHS 151
DV+ H N +YLV+E + DL + + +S ALT + +LFQLL+GL + HS
Sbjct: 68 LDVI---HTEN--KLYLVFEFLHQDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL Y
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
T++D+WS+GCIFAE++ R+ +FPG ++QL I LG+ +++ + Y
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT--PDEVVWPGVTSMPDYKP 239
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDP 325
S P FS++ P LL +ML +DP KRIS AL HP+ + P
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 161/290 (55%), Gaps = 9/290 (3%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY ++ IG G YG+V + N E A+KKI E+ T+RE+ +L+ L+H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQA-LTNDHCQYFLFQLLRGLKYL 149
++ L DV+ R + LV+E +D DL +++ + L + + FL QLL G+ Y
Sbjct: 62 IVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
H +LHRDLKP NLL+N +LKI DFGLAR + T VVT WYRAP++L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 210 NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
Y T+ID+WSVGCIFAE++ P+FPG +QL I ILG+ ++ + + + KY
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN--WPNVTELPKY 234
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ P+ IDLL KML DP +RI+ +AL+H Y
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 161/290 (55%), Gaps = 9/290 (3%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY ++ IG G YG+V + N E A+KKI E+ T+RE+ +L+ L+H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQA-LTNDHCQYFLFQLLRGLKYL 149
++ L DV+ R + LV+E +D DL +++ + L + + FL QLL G+ Y
Sbjct: 62 IVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
H +LHRDLKP NLL+N +LKI DFGLAR + T VVT WYRAP++L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 210 NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
Y T+ID+WSVGCIFAE++ P+FPG +QL I ILG+ ++ + + + KY
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKN--WPNVTELPKY 234
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ P+ IDLL KML DP +RI+ +AL+H Y
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 161/290 (55%), Gaps = 9/290 (3%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY ++ IG G YG+V + N E A+KKI E+ T+RE+ +L+ L+H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQA-LTNDHCQYFLFQLLRGLKYL 149
++ L DV+ R + LV+E +D DL +++ + L + + FL QLL G+ Y
Sbjct: 62 IVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
H +LHRDLKP NLL+N +LKI DFGLAR + T +VT WYRAP++L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 210 NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
Y T+ID+WSVGCIFAE++ P+FPG +QL I ILG+ ++ + + + KY
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN--WPNVTELPKY 234
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ P+ IDLL KML DP +RI+ +AL+H Y
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 194 bits (492), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 175/320 (54%), Gaps = 19/320 (5%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEK-VAIKKINNAFENRVDALRTLRELKLL 83
L D +Y + IG GAYG V + + + + VA+K++ L T+RE+ +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 84 RHLQ---HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS--SQALTNDHCQYF 138
RHL+ H NV+ L DV S + LV+E +D DL + + + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 139 LFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+FQLLRGL +LHS ++HRDLKP N+LV ++ +K+ DFGLAR + + +T VVT W
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLW 184
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
YRAPE+LL +Y T +D+WSVGCIFAE+ RKP+F G+ ++QL I++++G EED
Sbjct: 185 YRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 259 -EFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
+ P+ + KS P + D L DLL K L F+P KRIS AL HP
Sbjct: 244 PRDVALPRQAFHSKS-----AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298
Query: 318 YMSPLYDPSSN-----PPAQ 332
Y L N PP+Q
Sbjct: 299 YFQDLERCKENLDSHLPPSQ 318
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/301 (39%), Positives = 169/301 (56%), Gaps = 14/301 (4%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEK-VAIKKINNAFENRVDALRTLRELKLLRHLQ 87
D +Y + IG GAYG V + + + + VA+K++ L T+RE+ +LRHL+
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 88 ---HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS--SQALTNDHCQYFLFQL 142
H NV+ L DV S + LV+E +D DL + + + + +FQL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
LRGL +LHS ++HRDLKP N+LV ++ +K+ DFGLAR + + +T VVT WYRAP
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAP 188
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL-EFI 261
E+LL +Y T +D+WSVGCIFAE+ RKP+F G+ ++QL I++++G EED +
Sbjct: 189 EVLL-QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSP 321
P+ + KS P + D L DLL K L F+P KRIS AL HPY
Sbjct: 248 ALPRQAFHSKS-----AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
Query: 322 L 322
L
Sbjct: 303 L 303
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 168/298 (56%), Gaps = 14/298 (4%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEK-VAIKKINNAFENRVDALRTLRELKLLRHLQ 87
D +Y + IG GAYG V + + + + VA+K++ L T+RE+ +LRHL+
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 88 ---HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS--SQALTNDHCQYFLFQL 142
H NV+ L DV S + LV+E +D DL + + + + +FQL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
LRGL +LHS ++HRDLKP N+LV ++ +K+ DFGLAR + + +T VVT WYRAP
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAP 188
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL-EFI 261
E+LL +Y T +D+WSVGCIFAE+ RKP+F G+ ++QL I++++G EED +
Sbjct: 189 EVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
P+ + KS P + D L DLL K L F+P KRIS AL HPY
Sbjct: 248 ALPRQAFHSKS-----AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 156/293 (53%), Gaps = 10/293 (3%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y+ + +G G Y V ++ T+ VA+K+I E +RE+ LL+ L+H N+
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPC-TAIREVSLLKDLKHANI 62
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDH-CQYFLFQLLRGLKYLH 150
+ L D++ K + LV+E +D DL Q + + N H + FLFQLLRGL Y H
Sbjct: 63 VTLHDIIHTE-----KSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
+LHRDLKP NLL+N +LK+ DFGLAR + + VVT WYR P++LL +
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL-EFIDNPKARKY 269
Y T ID+W VGCIF E+ +P+FPG+ QL I ILG+ EE + N + + Y
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
+ P P DLL K+L F+ RIS +A++HP+ L
Sbjct: 238 --NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 187 bits (475), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 168/309 (54%), Gaps = 19/309 (6%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE 89
+++ ++ +G G Y V +N+ T VA+K++ E + +RE+ L++ L+HE
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPS-TAIREISLMKELKHE 63
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS------QALTNDHCQYFLFQLL 143
N++ L DV+ H N + LV+E MD DL + + S + L + +YF +QLL
Sbjct: 64 NIVRLYDVI---HTEN--KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 144 RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPE 203
+GL + H ILHRDLKP NLL+N LK+ DFGLAR + VVT WYRAP+
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPD 178
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
+L+ Y TSID+WS GCI AE++ KP+FPGT QLKLI +I+G+ E +
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238
Query: 264 -PKARKYIKSLPYTPGTPFSRLYPDA-HPL---AIDLLQKMLVFDPTKRISVTEALQHPY 318
PK I+ P P L P PL +D L +L +P R+S +AL HP+
Sbjct: 239 LPKYNPNIQQRP--PRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
Query: 319 MSPLYDPSS 327
+ Y +S
Sbjct: 297 FAEYYHHAS 305
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 163/299 (54%), Gaps = 12/299 (4%)
Query: 26 FEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRH 85
F+ KY + +G G+YG+V N++T VAIKK + ++++ +RE+KLL+
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 86 LQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN--DH--CQYFLFQ 141
L+HEN++ L +V R YLV+E +D H I+ + N D+ Q +LFQ
Sbjct: 81 LRHENLVNLLEVCKKKKRW-----YLVFEFVD---HTILDDLELFPNGLDYQVVQKYLFQ 132
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
++ G+ + HS NI+HRD+KP N+LV+ + +K+CDFG ART + + V TRWYRA
Sbjct: 133 IINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PELL+ YG ++DVW++GC+ E+ +P+FPG ++QL I+ LG+ E
Sbjct: 193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELF 252
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+ ++ P R YP + IDL +K L DP KR E L H +
Sbjct: 253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 170/315 (53%), Gaps = 14/315 (4%)
Query: 12 RSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRV 71
+ PG S + ID +Y I +G G YG V +++ TNE VAIK+I E
Sbjct: 17 QGPGSMSVSAAPSATSID-RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEG 75
Query: 72 DALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALT 131
+RE+ LL+ LQH N+I LK V+ +HR ++L++E + DL + + + ++
Sbjct: 76 VPGTAIREVSLLKELQHRNIIELKSVIHHNHR-----LHLIFEYAENDLKKYMDKNPDVS 130
Query: 132 NDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCD-----LKICDFGLARTSNGK 186
+ FL+QL+ G+ + HS LHRDLKP NLL++ + LKI DFGLAR
Sbjct: 131 MRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP 190
Query: 187 NQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLI 246
+ T ++T WYR PE+LL +Y TS+D+WS+ CI+AE+L + P+FPG ++QL I
Sbjct: 191 IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI 250
Query: 247 INILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSR-LYPDAHPLAIDLLQKMLVFDPT 305
+LG +D + + +S P G R L +DLL ML DP
Sbjct: 251 FEVLG--LPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPV 308
Query: 306 KRISVTEALQHPYMS 320
KRIS AL+HPY S
Sbjct: 309 KRISAKNALEHPYFS 323
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 160/291 (54%), Gaps = 6/291 (2%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY I IG G+YG+V NR+T + VAIKK + ++ V LRE+++L+ L+H N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTNDHCQYFLFQLLRGLKYL 149
++ L +V R + ++LV+E D T LH++ + + + + +Q L+ + +
Sbjct: 64 LVNLLEVF-----RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
H N +HRD+KP N+L+ + +K+CDFG AR G + + + V TRWYR+PELL+
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 210 NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
YG +DVW++GC+FAELL P++PG ++QL LI LG + +
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+K P +P+ A+ LL+ L DPT+R++ + L HPY
Sbjct: 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 160/299 (53%), Gaps = 16/299 (5%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI---NNAFENRVDALRTLRELKLLRHL 86
++Y P+ IG GAYG V + + + VA+K + N + T+RE+ LLR L
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 87 Q---HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ--ALTNDHCQYFLFQ 141
+ H NV+ L DV S V LV+E +D DL + + L + + + Q
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRA 201
LRGL +LH+ I+HRDLKP N+LV + +K+ DFGLAR + +T VVT WYRA
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALTPVVVTLWYRA 187
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL-EF 260
PE+LL Y T +D+WSVGCIFAE+ RKP+F G +QL I +++G E+D
Sbjct: 188 PEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246
Query: 261 IDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ P+ + P P + P+ LL +ML F+P KRIS ALQH Y+
Sbjct: 247 VSLPRG-----AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 158/296 (53%), Gaps = 13/296 (4%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ-- 87
++Y P+ IG GAYG V + + + VA+K + + T+RE+ LLR L+
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 88 -HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ--ALTNDHCQYFLFQLLR 144
H NV+ L DV S V LV+E +D DL + + L + + + Q LR
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPEL 204
GL +LH+ I+HRDLKP N+LV + +K+ DFGLAR + + VVT WYRAPE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALAPVVVTLWYRAPEV 182
Query: 205 LLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL-EFIDN 263
LL Y T +D+WSVGCIFAE+ RKP+F G +QL I +++G E+D +
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 264 PKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
P+ + P P + P+ LL +ML F+P KRIS ALQH Y+
Sbjct: 242 PRG-----AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 158/296 (53%), Gaps = 13/296 (4%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ-- 87
++Y P+ IG GAYG V + + + VA+K + + T+RE+ LLR L+
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 88 -HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ--ALTNDHCQYFLFQLLR 144
H NV+ L DV S V LV+E +D DL + + L + + + Q LR
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPEL 204
GL +LH+ I+HRDLKP N+LV + +K+ DFGLAR + + VVT WYRAPE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS-YQMALDPVVVTLWYRAPEV 182
Query: 205 LLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL-EFIDN 263
LL Y T +D+WSVGCIFAE+ RKP+F G +QL I +++G E+D +
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 264 PKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
P+ + P P + P+ LL +ML F+P KRIS ALQH Y+
Sbjct: 242 PRG-----AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 158/296 (53%), Gaps = 13/296 (4%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ-- 87
++Y P+ IG GAYG V + + + VA+K + + T+RE+ LLR L+
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 88 -HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ--ALTNDHCQYFLFQLLR 144
H NV+ L DV S V LV+E +D DL + + L + + + Q LR
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPEL 204
GL +LH+ I+HRDLKP N+LV + +K+ DFGLAR + + VVT WYRAPE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP-VVVTLWYRAPEV 182
Query: 205 LLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL-EFIDN 263
LL Y T +D+WSVGCIFAE+ RKP+F G +QL I +++G E+D +
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL 241
Query: 264 PKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
P+ + P P + P+ LL +ML F+P KRIS ALQH Y+
Sbjct: 242 PRG-----AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 175/312 (56%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ AF+NR EL+++R L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKL 70
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 188
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ + P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 249 EM-NPNYTEF--AFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 306 FDELRDPNVKLP 317
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ AF+NR EL+++R L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKL 70
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 188
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 249 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 306 FDELRDPNVKLP 317
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 47 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 98
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 99 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 157
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 216
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 217 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 276
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 277 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 333
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 334 FDELRDPNVKLP 345
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 166/316 (52%), Gaps = 9/316 (2%)
Query: 13 SPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVD 72
P K Y S+ + +KY + IG+G +G V + +R+T +KVA+KK+ E
Sbjct: 1 GPAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 73 ALRTLRELKLLRHLQHENVIALKDVMMPS---HRRNFKDVYLVYELMDTDLHQIIKSSQA 129
+ LRE+K+L+ L+HENV+ L ++ + R +YLV++ + DL ++ +
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 120
Query: 130 -LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SNGKN 187
T + + LL GL Y+H ILHRD+K N+L+ + LK+ DFGLAR S KN
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 188 QFMTEY---VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLK 244
Y VVT WYR PELLL +YG ID+W GCI AE+ R PI G +QL
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 245 LIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAH-PLAIDLLQKMLVFD 303
LI + GS E +DN + + ++ + RL P A+DL+ K+LV D
Sbjct: 241 LISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLD 300
Query: 304 PTKRISVTEALQHPYM 319
P +RI +AL H +
Sbjct: 301 PAQRIDSDDALNHDFF 316
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 104
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 105 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 222
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 283 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 340 FDELRDPNVKLP 351
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 55 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 106
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 107 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 165
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 224
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 225 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 284
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 285 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 341
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 342 FDELRDPNVKLP 353
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 24 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 75
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 76 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 134
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 135 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 193
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 194 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 253
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 254 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 310
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 311 FDELRDPNVKLP 322
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 98 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 149
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 150 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 208
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 267
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 268 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 327
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 328 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 384
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 385 FDELRDPNVKLP 396
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 57 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 108
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 109 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 167
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 226
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 227 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 286
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 287 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 343
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 344 FDELRDPNVKLP 355
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ AF+NR EL+++R L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKL 70
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 188
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ + P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 249 EM-NPNYTEF--AFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 306 FDELRDPNVKLP 317
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 166/316 (52%), Gaps = 9/316 (2%)
Query: 13 SPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVD 72
P K Y S+ + +KY + IG+G +G V + +R+T +KVA+KK+ E
Sbjct: 1 GPAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 73 ALRTLRELKLLRHLQHENVIALKDVMMPS---HRRNFKDVYLVYELMDTDLHQIIKSSQA 129
+ LRE+K+L+ L+HENV+ L ++ + R +YLV++ + DL ++ +
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV 120
Query: 130 -LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SNGKN 187
T + + LL GL Y+H ILHRD+K N+L+ + LK+ DFGLAR S KN
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 188 QFMTEY---VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLK 244
Y VVT WYR PELLL +YG ID+W GCI AE+ R PI G +QL
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 245 LIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAH-PLAIDLLQKMLVFD 303
LI + GS E +DN + + ++ + RL P A+DL+ K+LV D
Sbjct: 241 LISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLD 300
Query: 304 PTKRISVTEALQHPYM 319
P +RI +AL H +
Sbjct: 301 PAQRIDSDDALNHDFF 316
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 32 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 83
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 84 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 142
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 201
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 202 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 261
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 262 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 318
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 319 FDELRDPNVKLP 330
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 166/316 (52%), Gaps = 9/316 (2%)
Query: 13 SPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVD 72
P K Y S+ + +KY + IG+G +G V + +R+T +KVA+KK+ E
Sbjct: 1 GPAKQYDSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 60
Query: 73 ALRTLRELKLLRHLQHENVIALKDVMMPS---HRRNFKDVYLVYELMDTDLHQIIKSSQA 129
+ LRE+K+L+ L+HENV+ L ++ + R +YLV++ + DL ++ +
Sbjct: 61 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 120
Query: 130 -LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SNGKN 187
T + + LL GL Y+H ILHRD+K N+L+ + LK+ DFGLAR S KN
Sbjct: 121 KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
Query: 188 QFMTEY---VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLK 244
Y VVT WYR PELLL +YG ID+W GCI AE+ R PI G +QL
Sbjct: 181 SQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLA 240
Query: 245 LIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAH-PLAIDLLQKMLVFD 303
LI + GS E +DN + + ++ + RL P A+DL+ K+LV D
Sbjct: 241 LISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLD 300
Query: 304 PTKRISVTEALQHPYM 319
P +RI +AL H +
Sbjct: 301 PAQRIDSDDALNHDFF 316
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 171 bits (434), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 174/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 70
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + Y+ +R+Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYY 188
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 249 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 306 FDELRDPNVKLP 317
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 160/299 (53%), Gaps = 9/299 (3%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE 89
+KY + IG+G +G V + +R+T +KVA+KK+ E + LRE+K+L+ L+HE
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 90 NVIALKDVMMPS---HRRNFKDVYLVYELMDTDLHQIIKSSQA-LTNDHCQYFLFQLLRG 145
NV+ L ++ + R +YLV++ + DL ++ + T + + LL G
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG 136
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SNGKNQFMTEY---VVTRWYRA 201
L Y+H ILHRD+K N+L+ + LK+ DFGLAR S KN Y VVT WYR
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
PELLL +YG ID+W GCI AE+ R PI G +QL LI + GS E +
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNV 256
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAH-PLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
DN + + ++ + RL P A+DL+ K+LV DP +RI +AL H +
Sbjct: 257 DNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 104
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 105 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 222
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 283 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 340 FDELRDPNVKLP 351
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 82
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 83 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 200
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 260
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 261 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 318 FDELRDPNVKLP 329
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 82
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 83 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 200
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 260
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 261 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 318 FDELRDPNVKLP 329
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 173/313 (55%), Gaps = 25/313 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 70
Query: 87 QHENVIALKDVMMPSHRRNFKDVY---LVYELMDTDLHQIIK----SSQALTNDHCQYFL 139
H N++ L+ S + KDV LV + + ++++ + + Q L + + ++
Sbjct: 71 DHCNIVRLRYFFYSSGEK--KDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRW 198
+QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRY 187
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
YRAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 259 EFIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H
Sbjct: 248 REM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 318 YMSPLYDPSSNPP 330
+ L DP+ P
Sbjct: 305 FFDELRDPNVKLP 317
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 70
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 188
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 249 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 306 FDELRDPNVKLP 317
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 38 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 89
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 90 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 148
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 207
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 267
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 268 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 324
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 325 FDELRDPNVKLP 336
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 23 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 74
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 75 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 133
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 192
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 252
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 253 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 309
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 310 FDELRDPNVKLP 321
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 27 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 78
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 79 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 137
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 196
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 256
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 257 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 313
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 314 FDELRDPNVKLP 325
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 70
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 188
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 249 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 306 FDELRDPNVKLP 317
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 173/312 (55%), Gaps = 23/312 (7%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHL 86
+ Y K IG G++G+V + ++ E VAIKK+ + F+NR EL+++R L
Sbjct: 20 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 71
Query: 87 QHENVIALKDVMMPSHRRNFKDVYL--VYELMDTDLHQIIK----SSQALTNDHCQYFLF 140
H N++ L+ S + +VYL V + + ++++ + + Q L + + +++
Sbjct: 72 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 130
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ + + + +R+Y
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSXICSRYY 189
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
RAPEL+ +Y +SIDVWS GC+ AELL +PIFPG ++QL II +LG+ E +
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 249
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
+ NP ++ P P+++++ P P AI L ++L + PT R++ EA H +
Sbjct: 250 EM-NPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 306
Query: 319 MSPLYDPSSNPP 330
L DP+ P
Sbjct: 307 FDELRDPNVKLP 318
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 194/369 (52%), Gaps = 25/369 (6%)
Query: 4 PVEPPNGIRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI 63
P++ PN + K S +T + + Y K IG G++G+V + E++E VAIKK+
Sbjct: 17 PLDDPNKVI---KVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKV 72
Query: 64 --NNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRN---FKDVYLVY--ELM 116
+ F+NR EL+++R ++H NV+ LK + + F ++ L Y E +
Sbjct: 73 LQDKRFKNR--------ELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETV 124
Query: 117 DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKIC 175
K Q + + +++QLLR L Y+HS I HRD+KP NLL++ LK+
Sbjct: 125 YRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLI 184
Query: 176 DFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFP 235
DFG A+ ++ + +R+YRAPEL+ NY T+ID+WS GC+ AEL+ +P+FP
Sbjct: 185 DFGSAKILIAGEPNVSX-ICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP 243
Query: 236 GTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLY-PDAHPLAID 294
G ++QL II +LG+ E ++ + NP ++ P PFS+++ P P AID
Sbjct: 244 GESGIDQLVEIIKVLGTPSREQIKTM-NPNYMEH--KFPQIRPHPFSKVFRPRTPPDAID 300
Query: 295 LLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLK 354
L+ ++L + P+ R++ EAL HP+ L + P + + E +R ++
Sbjct: 301 LISRLLEYTPSARLTAIEALCHPFFDELRTGEARMPNGRELPPLFNWTKEELSVRPDLIS 360
Query: 355 EMLHYHPEA 363
++ H EA
Sbjct: 361 RLVPQHAEA 369
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 173/317 (54%), Gaps = 28/317 (8%)
Query: 39 GRGAYGIVCSSVNRETNEKVAIKKI--NNAFENRVDALRTLRELKLLRHLQHENVIALKD 96
G+G +G V + T VAIKK+ + F NR L+ +++L +L H N++ L+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR--ELQIMQDLAVL---HHPNIVQLQS 86
Query: 97 VMMPSHRRNFKDVYL--VYELMDTDLHQIIKS----SQALTNDHCQYFLFQLLRGLKYLH 150
R+ +D+YL V E + LH+ ++ A + FLFQL+R + LH
Sbjct: 87 YFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH 146
Query: 151 --SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
S N+ HRD+KP N+LVN A+ LK+CDFG A+ + ++ Y+ +R+YRAPEL+
Sbjct: 147 LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYICSRYYRAPELIFG 205
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKAR 267
+Y T++D+WSVGCIFAE++ +PIF G QL I+ +LG E L + NP
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL-NPSHT 264
Query: 268 KYIKSLPYTPGTPFSRLYPDAHPL-----AIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
L + G P+S ++ D H L A DLL +L + P +R+ EAL HPY L
Sbjct: 265 DV--DLYNSKGIPWSNVFSD-HSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321
Query: 323 YDPSSNPP--AQVPIDL 337
+DP++ P +P DL
Sbjct: 322 HDPATKLPNNKDLPEDL 338
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 167/322 (51%), Gaps = 43/322 (13%)
Query: 38 IGRGAYGIV--CSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALK 95
+GRG YG V + + ++ A+K+I E ++ RE+ LLR L+H NVI+L+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACREIALLRELKHPNVISLQ 84
Query: 96 DVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQA---------LTNDHCQYFLFQLLRGL 146
V + R V+L+++ + DL IIK +A L + L+Q+L G+
Sbjct: 85 KVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141
Query: 147 KYLHSANILHRDLKPGNLLVNANC----DLKICDFGLARTSNGKNQFMTE---YVVTRWY 199
YLH+ +LHRDLKP N+LV +KI D G AR N + + + VVT WY
Sbjct: 142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTE---------CLNQLKLIINIL 250
RAPELLL +Y +ID+W++GCIFAELL +PIF + +QL I N++
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261
Query: 251 GSRREEDLEFIDN-PKARKYIKSLPYTPGTPFSRL-YPDAHPL-----AIDLLQKMLVFD 303
G ++D E I P+ +K T S + Y + H + A LLQK+L D
Sbjct: 262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMD 321
Query: 304 PTKRISVTEALQHPYMSPLYDP 325
P KRI+ +A+Q PY L DP
Sbjct: 322 PIKRITSEQAMQDPYF--LEDP 341
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 154 bits (390), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 173/331 (52%), Gaps = 49/331 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY K +G G++GIVC + E+ ++ A+KK+ D REL +++ L H N
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ------DPRYKNRELDIMKVLDHVN 61
Query: 91 VIALKDVM--------------------------MPSHRRNF-------KDVYLVYELMD 117
+I L D + +H ++ K + ++ E +
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 118 TDLHQI----IKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCD-L 172
LH++ I+S +++ + +++QL R + ++HS I HRD+KP NLLVN+ + L
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL 181
Query: 173 KICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKP 232
K+CDFG A+ ++ + +R+YRAPEL+L Y SID+WS+GC+F EL+ KP
Sbjct: 182 KLCDFGSAKKLI-PSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
Query: 233 IFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHP-L 291
+F G ++QL II I+G+ +E + + NP + P + ++ P+ P L
Sbjct: 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRM-NPHYTEV--RFPTLKAKDWRKILPEGTPSL 297
Query: 292 AIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
AIDLL+++L ++P RI+ EA+ HP+ L
Sbjct: 298 AIDLLEQILRYEPDLRINPYEAMAHPFFDHL 328
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 167/307 (54%), Gaps = 40/307 (13%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE-N 90
Y ++ +GRG Y V ++N NEKV +K + +N++ RE+K+L +L+ N
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK-----REIKILENLRGGPN 93
Query: 91 VIALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYL 149
+I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y
Sbjct: 94 IITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYC 147
Query: 150 HSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCC 208
HS I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDY 206
Query: 209 DNYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID---- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNI 263
Query: 263 --NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+P+ +RK + ++ P A+D L K+L +D R++ E
Sbjct: 264 ELDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTARE 317
Query: 313 ALQHPYM 319
A++HPY
Sbjct: 318 AMEHPYF 324
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 147/294 (50%), Gaps = 41/294 (13%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y + +G+G++G V +R T ++ A+K IN A D LRE++LL+ L H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ L +++ S Y+V EL +IIK + +D + + Q+ G+ Y
Sbjct: 83 IMKLFEILEDSS-----SFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSGITY 136
Query: 149 LHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
+H NI+HRDLKP N+L+ + +CD+KI DFGL+ T +N M + + T +Y APE+L
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
Y DVWS G I LL P F G + LK + +
Sbjct: 196 RGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV------------------E 235
Query: 266 ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
KY LP + + DA DL++KML F P+ RI+ T+ L+HP++
Sbjct: 236 TGKYAFDLP-----QWRTISDDAK----DLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 147/294 (50%), Gaps = 41/294 (13%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y + +G+G++G V +R T ++ A+K IN A D LRE++LL+ L H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ L +++ S Y+V EL +IIK + +D + + Q+ G+ Y
Sbjct: 83 IMKLFEILEDS-----SSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSGITY 136
Query: 149 LHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
+H NI+HRDLKP N+L+ + +CD+KI DFGL+ T +N M + + T +Y APE+L
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
Y DVWS G I LL P F G + LK + +
Sbjct: 196 R--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV------------------E 235
Query: 266 ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
KY LP + + DA DL++KML F P+ RI+ T+ L+HP++
Sbjct: 236 TGKYAFDLP-----QWRTISDDAK----DLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 147/294 (50%), Gaps = 41/294 (13%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y + +G+G++G V +R T ++ A+K IN A D LRE++LL+ L H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ L +++ S Y+V EL +IIK + +D + + Q+ G+ Y
Sbjct: 83 IMKLFEILEDS-----SSFYIVGELYTGGELFDEIIKRKRFSEHDAAR-IIKQVFSGITY 136
Query: 149 LHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
+H NI+HRDLKP N+L+ + +CD+KI DFGL+ T +N M + + T +Y APE+L
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS-TCFQQNTKMKDRIGTAYYIAPEVL 195
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
Y DVWS G I LL P F G + LK + +
Sbjct: 196 R--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV------------------E 235
Query: 266 ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
KY LP + + DA DL++KML F P+ RI+ T+ L+HP++
Sbjct: 236 TGKYAFDLP-----QWRTISDDAK----DLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 166/326 (50%), Gaps = 42/326 (12%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ 87
+ +Y +K IG+G++G V + + + ++ VA+K + N A +R L+ LR
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS--QALTNDHCQYFLFQLLRG 145
+N + + ++ RN + + +EL+ +L+++IK + Q + + F +L+
Sbjct: 155 KDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 146 LKYLHSANILHRDLKPGNLLV--NANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPE 203
L LH I+H DLKP N+L+ +K+ DFG +S ++Q + + +R+YRAPE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYTXIQSRFYRAPE 269
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
++L YG ID+WS+GCI AELL P+ PG + +QL +I +LG ++ L+ +
Sbjct: 270 VILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD--AS 326
Query: 264 PKARKYIKSLPY-------------------------TPGTPFSRLYPDA-----HPLAI 293
+A+ ++ Y G P SR + +A PL +
Sbjct: 327 KRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386
Query: 294 DLLQKMLVFDPTKRISVTEALQHPYM 319
D L++ L +DP R++ +AL+HP++
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 166/326 (50%), Gaps = 42/326 (12%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ 87
+ +Y +K IG+G++G V + + + ++ VA+K + N A +R L+ LR
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS--QALTNDHCQYFLFQLLRG 145
+N + + ++ RN + + +EL+ +L+++IK + Q + + F +L+
Sbjct: 155 KDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 146 LKYLHSANILHRDLKPGNLLV--NANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPE 203
L LH I+H DLKP N+L+ +K+ DFG +S ++Q + + +R+YRAPE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYTXIQSRFYRAPE 269
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
++L YG ID+WS+GCI AELL P+ PG + +QL +I +LG ++ L+ +
Sbjct: 270 VILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD--AS 326
Query: 264 PKARKYIKSLPY-------------------------TPGTPFSRLYPDA-----HPLAI 293
+A+ ++ Y G P SR + +A PL +
Sbjct: 327 KRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386
Query: 294 DLLQKMLVFDPTKRISVTEALQHPYM 319
D L++ L +DP R++ +AL+HP++
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 127 bits (320), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 165/326 (50%), Gaps = 42/326 (12%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ 87
+ +Y +K IG+G +G V + + + ++ VA+K + N A +R L+ LR
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS--QALTNDHCQYFLFQLLRG 145
+N + + ++ RN + + +EL+ +L+++IK + Q + + F +L+
Sbjct: 155 KDNTMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQC 212
Query: 146 LKYLHSANILHRDLKPGNLLV--NANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPE 203
L LH I+H DLKP N+L+ +K+ DFG +S ++Q + + +R+YRAPE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYXXIQSRFYRAPE 269
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
++L YG ID+WS+GCI AELL P+ PG + +QL +I +LG ++ L+ +
Sbjct: 270 VILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLD--AS 326
Query: 264 PKARKYIKSLPY-------------------------TPGTPFSRLYPDA-----HPLAI 293
+A+ ++ Y G P SR + +A PL +
Sbjct: 327 KRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386
Query: 294 DLLQKMLVFDPTKRISVTEALQHPYM 319
D L++ L +DP R++ +AL+HP++
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 164/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKVA+K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N+L++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYM 319
++HPY
Sbjct: 319 MEHPYF 324
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 162/315 (51%), Gaps = 32/315 (10%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NE+V +K + + R ++ L+ LR N+
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPV--KKKKIKREVKILENLR--GGTNI 95
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D + K LV+E ++ TD Q+ Q LT+ ++++++LL+ L Y H
Sbjct: 96 IKLIDTVKDPVS---KTPALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDYCH 149
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR-VASRYFKGPELLVDYQ 208
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRR----------EEDL 258
Y S+D+WS+GC+ A ++ R+ P F G + +QL I +LG+ + D
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDP 268
Query: 259 EFID--NPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
F D +RK ++ ++ P A+DLL K+L +D +R++ EA++H
Sbjct: 269 HFNDILGQHSRKRWENFIHSENRHL------VSPEALDLLDKLLRYDHQQRLTAKEAMEH 322
Query: 317 PYMSPLYDPSSNPPA 331
PY P+ S P A
Sbjct: 323 PYFYPVVKEQSQPSA 337
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 168/318 (52%), Gaps = 38/318 (11%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYMSPLYDPSSNPPA 331
++HPY P+ S P A
Sbjct: 319 MEHPYFYPVVKEQSQPCA 336
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-----AFENRVD-ALRTLRELKLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ D AL E+++L+
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
L H +I +K+ + +D Y+V ELM+ +L + ++ L C+ + +Q+L
Sbjct: 77 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 130
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G+ M T Y
Sbjct: 131 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYL 189
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
APE+L+ Y ++D WS+G I L P F S +
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHRTQV 232
Query: 259 EFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
D + KY + P ++ + A+DL++K+LV DP R + EAL+HP+
Sbjct: 233 SLKDQITSGKY----NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 283
Query: 319 M 319
+
Sbjct: 284 L 284
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 155/306 (50%), Gaps = 32/306 (10%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V +N NEK IK + + L + N+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLMGGPNI 88
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y HS
Sbjct: 89 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 143
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+ +
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 202
Query: 211 YGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED-- 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 258 LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
LE + +RK ++K + S P AID L K+L +D +R++ EA+ H
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 317 PYMSPL 322
PY +
Sbjct: 316 PYFQQV 321
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-----AFENRVD-ALRTLRELKLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ D AL E+++L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
L H +I +K+ + +D Y+V ELM+ +L + ++ L C+ + +Q+L
Sbjct: 71 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G+ M T Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYL 183
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
APE+L+ Y ++D WS+G I L P F S +
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHRTQV 226
Query: 259 EFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
D + KY + P ++ + A+DL++K+LV DP R + EAL+HP+
Sbjct: 227 SLKDQITSGKY----NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 319 M 319
+
Sbjct: 278 L 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-----AFENRVD-ALRTLRELKLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ D AL E+++L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
L H +I +K+ + +D Y+V ELM+ +L + ++ L C+ + +Q+L
Sbjct: 71 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G+ M T Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYL 183
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
APE+L+ Y ++D WS+G I L P F S +
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHRTQV 226
Query: 259 EFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
D + KY + P ++ + A+DL++K+LV DP R + EAL+HP+
Sbjct: 227 SLKDQITSGKY----NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 319 M 319
+
Sbjct: 278 L 278
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-----AFENRVD-ALRTLRELKLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ D AL E+++L+
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
L H +I +K+ + +D Y+V ELM+ +L + ++ L C+ + +Q+L
Sbjct: 70 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 123
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G+ M T Y
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYL 182
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
APE+L+ Y ++D WS+G I L P F S +
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHRTQV 225
Query: 259 EFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
D + KY + P ++ + A+DL++K+LV DP R + EAL+HP+
Sbjct: 226 SLKDQITSGKY----NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 276
Query: 319 M 319
+
Sbjct: 277 L 277
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 146/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-----AFENRVD-ALRTLRELKLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ D AL E+++L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
L H +I +K+ + +D Y+V ELM+ +L + ++ L C+ + +Q+L
Sbjct: 71 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G+ M T Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYL 183
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
APE+L+ Y ++D WS+G I L P F S +
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHRTQV 226
Query: 259 EFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
D + KY + P ++ + A+DL++K+LV DP R + EAL+HP+
Sbjct: 227 SLKDQITSGKY----NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 319 M 319
+
Sbjct: 278 L 278
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 160/312 (51%), Gaps = 32/312 (10%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NE+V +K + + R ++ L+ LR N+
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPV--KKKKIKREVKILENLR--GGTNI 100
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D + K LV+E ++ TD Q+ Q LT+ ++++++LL+ L Y H
Sbjct: 101 IKLIDTVKDPVS---KTPALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDYCH 154
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR-VASRYFKGPELLVDYQ 213
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRR----------EEDL 258
Y S+D+WS+GC+ A ++ R+ P F G + +QL I +LG+ + D
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDP 273
Query: 259 EFID--NPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
F D +RK ++ ++ P A+DLL K+L +D +R++ EA++H
Sbjct: 274 HFNDILGQHSRKRWENFIHSENRHL------VSPEALDLLDKLLRYDHQQRLTAKEAMEH 327
Query: 317 PYMSPLYDPSSN 328
PY P+ S
Sbjct: 328 PYFYPVVKEQSQ 339
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 162/307 (52%), Gaps = 34/307 (11%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE-N 90
Y ++ +GRG Y V +N NEK IK + + RE+K+L++L N
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK-----KKKIKREIKILQNLXGGPN 87
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y H
Sbjct: 88 IVKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 151 SANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQ 201
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED- 257
+Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 258 -LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
LE + +RK ++K + S P AID L K+L +D +R++ EA+
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMT 314
Query: 316 HPYMSPL 322
HPY +
Sbjct: 315 HPYFQQV 321
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 162/307 (52%), Gaps = 34/307 (11%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE-N 90
Y ++ +GRG Y V +N NEK IK + + RE+K+L++L N
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK-----KKKIKREIKILQNLXGGPN 88
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y H
Sbjct: 89 IVKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCH 143
Query: 151 SANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQ 202
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED- 257
+Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 262
Query: 258 -LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
LE + +RK ++K + S P AID L K+L +D +R++ EA+
Sbjct: 263 QLEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMT 315
Query: 316 HPYMSPL 322
HPY +
Sbjct: 316 HPYFQQV 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 162/307 (52%), Gaps = 34/307 (11%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE-N 90
Y ++ +GRG Y V +N NEK IK + + RE+K+L++L N
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK-----KKKIKREIKILQNLXGGPN 87
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y H
Sbjct: 88 IVKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 151 SANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQ 201
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED- 257
+Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 258 -LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
LE + +RK ++K + S P AID L K+L +D +R++ EA+
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMT 314
Query: 316 HPYMSPL 322
HPY +
Sbjct: 315 HPYFQQV 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 162/307 (52%), Gaps = 34/307 (11%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE-N 90
Y ++ +GRG Y V +N NEK IK + + RE+K+L++L N
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK-----KKKIKREIKILQNLXGGPN 87
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y H
Sbjct: 88 IVKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCH 142
Query: 151 SANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQ 201
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED- 257
+Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDP 261
Query: 258 -LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
LE + +RK ++K + S P AID L K+L +D +R++ EA+
Sbjct: 262 QLEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMT 314
Query: 316 HPYMSPL 322
HPY +
Sbjct: 315 HPYFQQV 321
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 162/307 (52%), Gaps = 34/307 (11%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE-N 90
Y ++ +GRG Y V +N NEK IK + + RE+K+L++L N
Sbjct: 54 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK-----KKKIKREIKILQNLXGGPN 108
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y H
Sbjct: 109 IVKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCH 163
Query: 151 SANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQ 222
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED- 257
+Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDP 282
Query: 258 -LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
LE + +RK ++K + S P AID L K+L +D +R++ EA+
Sbjct: 283 QLEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMT 335
Query: 316 HPYMSPL 322
HPY +
Sbjct: 336 HPYFQQV 342
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 154/306 (50%), Gaps = 32/306 (10%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V +N NEK IK + + L N+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLCGGPNI 88
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y HS
Sbjct: 89 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 143
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+ +
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 202
Query: 211 YGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED-- 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 258 LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
LE + +RK ++K + S P AID L K+L +D +R++ EA+ H
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 317 PYMSPL 322
PY +
Sbjct: 316 PYFQQV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 154/306 (50%), Gaps = 32/306 (10%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V +N NEK IK + + L N+
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLCGGPNI 89
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y HS
Sbjct: 90 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 144
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+ +
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 203
Query: 211 YGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED-- 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 263
Query: 258 LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
LE + +RK ++K + S P AID L K+L +D +R++ EA+ H
Sbjct: 264 LEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 317 PYMSPL 322
PY +
Sbjct: 317 PYFQQV 322
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 154/306 (50%), Gaps = 32/306 (10%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V +N NEK IK + + L N+
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLCGGPNI 90
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y HS
Sbjct: 91 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 145
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+ +
Sbjct: 146 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 204
Query: 211 YGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED-- 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 205 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 264
Query: 258 LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
LE + +RK ++K + S P AID L K+L +D +R++ EA+ H
Sbjct: 265 LEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMTH 317
Query: 317 PYMSPL 322
PY +
Sbjct: 318 PYFQQV 323
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 154/306 (50%), Gaps = 32/306 (10%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V +N NEK IK + + L N+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLCGGPNI 88
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + LT+ +Y++++LL+ L Y HS
Sbjct: 89 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 143
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA + ++ V +R+++ PELL+ +
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 202
Query: 211 YGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGS----------RREED-- 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I +LG+ R E D
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 258 LEFIDNPKARK-YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
LE + +RK ++K + S P AID L K+L +D +R++ EA+ H
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVS-------PEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 317 PYMSPL 322
PY +
Sbjct: 316 PYFQQV 321
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYM 319
++HPY
Sbjct: 319 MEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYM 319
++HPY
Sbjct: 319 MEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYM 319
++HPY
Sbjct: 319 MEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYM 319
++HPY
Sbjct: 319 MEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYM 319
++HPY
Sbjct: 319 MEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 93
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 94 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 147
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 206
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 263
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 264 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 317
Query: 314 LQHPYM 319
++HPY
Sbjct: 318 MEHPYF 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYM 319
++HPY
Sbjct: 319 MEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYM 319
++HPY
Sbjct: 319 MEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 94
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 95 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 148
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 207
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 318
Query: 314 LQHPYM 319
++HPY
Sbjct: 319 MEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 44 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 99
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 100 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 153
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 212
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 213 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 269
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 270 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 323
Query: 314 LQHPYM 319
++HPY
Sbjct: 324 MEHPYF 329
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 93
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 94 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 147
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 206
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 263
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 264 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 317
Query: 314 LQHPYM 319
++HPY
Sbjct: 318 MEHPYF 323
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 163/306 (53%), Gaps = 38/306 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +GRG Y V ++N NEKV +K + + + R ++ L+ LR N+
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR--GGPNI 92
Query: 92 IALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L D++ R LV+E + +TD Q+ Q LT+ +++++++L+ L Y H
Sbjct: 93 ITLADIVKDPVSRTPA---LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCH 146
Query: 151 SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
S I+HRD+KP N++++ + L++ D+GLA + ++ V +R+++ PELL+
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVDYQ 205
Query: 210 NYGTSIDVWSVGCIFAELLGRK-PIFPGTECLNQLKLIINILGSRREEDL-EFID----- 262
Y S+D+WS+GC+ A ++ RK P F G + +QL I +LG+ EDL ++ID
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 262
Query: 263 -NPK--------ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
+P+ +RK + ++ P A+D L K+L +D R++ EA
Sbjct: 263 LDPRFNDILGRHSRKRWERFVHSENQHL------VSPEALDFLDKLLRYDHQSRLTAREA 316
Query: 314 LQHPYM 319
++HPY
Sbjct: 317 MEHPYF 322
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 146/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-----AFENRVD-ALRTLRELKLLR 84
+Y+ K +G GA G V + R+T +KVAI+ I+ D AL E+++L+
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 209
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
L H +I +K+ + +D Y+V ELM+ +L + ++ L C+ + +Q+L
Sbjct: 210 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 263
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G+ M T Y
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYL 322
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
APE+L+ Y ++D WS+G I L P F S +
Sbjct: 323 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHRTQV 365
Query: 259 EFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
D + KY + P ++ + A+DL++K+LV DP R + EAL+HP+
Sbjct: 366 SLKDQITSGKY----NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 416
Query: 319 M 319
+
Sbjct: 417 L 417
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 146/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-----AFENRVD-ALRTLRELKLLR 84
+Y+ K +G GA G V + R+T +KVAI+ I+ D AL E+++L+
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
L H +I +K+ + +D Y+V ELM+ +L + ++ L C+ + +Q+L
Sbjct: 196 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 249
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G+ M T Y
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRTLCGTPTYL 308
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
APE+L+ Y ++D WS+G I L P F S +
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF-----------------SEHRTQV 351
Query: 259 EFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
D + KY + P ++ + A+DL++K+LV DP R + EAL+HP+
Sbjct: 352 SLKDQITSGKY----NFIP-----EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402
Query: 319 M 319
+
Sbjct: 403 L 403
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 142/292 (48%), Gaps = 42/292 (14%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDA-LRTLRELKLLRHLQHEN 90
Y+ + +G G++G V + + +T +KVA+K I+ + D +R RE+ L+ L+H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+I L DV+ D+ +V E +L I + +T D + F Q++ ++Y H
Sbjct: 71 IIKLYDVITTP-----TDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP NLL++ N ++KI DFGL+ N F+ + Y APE++
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVINGKLY 184
Query: 211 YGTSIDVWSVGCI-FAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
G +DVWS G + + L+GR P D EFI P K
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPF-----------------------DDEFI--PNLFKK 219
Query: 270 IKSLPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+ S Y + PD P A L+++M+V DP +RI++ E + P+ +
Sbjct: 220 VNSCVY--------VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 138/297 (46%), Gaps = 43/297 (14%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K +G GAYG V ++ T+ + AIK I + + L E+ +L+ L H N+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 92 IALKDVMMPSHRRNFKDVYLVY---ELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
+ L D +RN+ V Y EL D +H++ + Q+L G+ Y
Sbjct: 99 MKLYDFF--EDKRNYYLVMECYKGGELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTY 151
Query: 149 LHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
LH NI+HRDLKP NLL+ + + +KI DFGL+ + + M E + T +Y APE+L
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERLGTAYYIAPEVL 210
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
Y DVWS+G I LL P F G D
Sbjct: 211 R--KKYDEKCDVWSIGVILFILLAGYPPFGGQ-----------------------TDQEI 245
Query: 266 ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
RK K YT +P + + A DL+++ML FD +RIS +AL+HP++ +
Sbjct: 246 LRKVEKG-KYTFDSP---EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 155/332 (46%), Gaps = 45/332 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEK-VAIKKINNAFENRVDALRTLRELKLLRHL 86
+ +Y + +G GA+G V ++ + + VA+K + N + +A R+ E+++L HL
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARS--EIQVLEHL 68
Query: 87 QHEN-VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL--TNDHCQYFLFQLL 143
+ + V M + + +V+EL+ + IK + L DH + +Q+
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA-------------------NCDLKICDFGLARTSN 184
+ + +LHS + H DLKP N+L N D+K+ DFG ++
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG---SAT 185
Query: 185 GKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLK 244
++ + V TR YRAPE++L + DVWS+GCI E +FP + L
Sbjct: 186 YDDEHHSTLVSTRHYRAPEVILAL-GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 245 LIINILG---------SRR-----EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHP 290
++ ILG +R+ + L++ ++ A +Y+ S P F H
Sbjct: 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYV-SRACKPLKEFMLSQDVEHE 303
Query: 291 LAIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
DL+QKML +DP KRI++ EAL+HP+ L
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFFDLL 335
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 170/351 (48%), Gaps = 61/351 (17%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN--AFENRVDALRTLRE 79
W +EID+ IG+G++G V + +R E VAIK I N AF N+ E
Sbjct: 33 WMDRYEIDS------LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----E 81
Query: 80 LKLLRHL-QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS--QALTNDHCQ 136
++LL + +H+ + V + H + LV+E++ +L+ +++++ + ++ + +
Sbjct: 82 VRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR 141
Query: 137 YFLFQLLRGLKYLHS--ANILHRDLKPGNLLVN--ANCDLKICDFGLARTSNGKNQFMTE 192
F Q+ L +L + +I+H DLKP N+L+ +KI DFG +S Q + +
Sbjct: 142 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQ 198
Query: 193 YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGS 252
+ +R+YR+PE+LL Y +ID+WS+GCI E+ +P+F G ++Q+ I+ +LG
Sbjct: 199 XIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI 257
Query: 253 RREEDLEFIDNPKARKYIKSLP---------------YTP--------------GTPFSR 283
L+ PKARK+ + LP Y P G P R
Sbjct: 258 PPAHILD--QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGR 315
Query: 284 LYPDA-HPLA-----IDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
++ H +A DL+ +ML +DP RI ALQH + D +N
Sbjct: 316 RAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTADEGTN 366
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 154/332 (46%), Gaps = 45/332 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEK-VAIKKINNAFENRVDALRTLRELKLLRHL 86
+ +Y + +G GA+G V ++ + + VA+K + N + +A R+ E+++L HL
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARS--EIQVLEHL 68
Query: 87 QHEN-VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL--TNDHCQYFLFQLL 143
+ + V M + + +V+EL+ + IK + L DH + +Q+
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA-------------------NCDLKICDFGLARTSN 184
+ + +LHS + H DLKP N+L N D+K+ DFG ++
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG---SAT 185
Query: 185 GKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLK 244
++ + V R YRAPE++L + DVWS+GCI E +FP + L
Sbjct: 186 YDDEHHSTLVXXRHYRAPEVILAL-GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 245 LIINILG---------SRR-----EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHP 290
++ ILG +R+ + L++ ++ A +Y+ S P F H
Sbjct: 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYV-SRACKPLKEFMLSQDVEHE 303
Query: 291 LAIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
DL+QKML +DP KRI++ EAL+HP+ L
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPFFDLL 335
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 37/306 (12%)
Query: 18 YYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTL 77
Y+ T Y + +G+GA+ +V V + ++ A K IN + D +
Sbjct: 19 YFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE 78
Query: 78 RELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQ 136
RE ++ R L+H N++ L D + F YLV++L+ +L + I + + +
Sbjct: 79 REARICRLLKHPNIVRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADAS 133
Query: 137 YFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCD---LKICDFGLARTSNGKNQFMTEY 193
+ + Q+L + ++H +I+HRDLKP NLL+ + C +K+ DFGLA G+ Q +
Sbjct: 134 HCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGF 193
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSR 253
T Y +PE+L D YG +D+W+ G I LL P F
Sbjct: 194 AGTPGYLSPEVLR-KDPYGKPVDIWACGVILYILLVGYPPFWDE---------------- 236
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
D K + IK+ Y +P + P A +L+ +ML +P KRI+ +A
Sbjct: 237 --------DQHKLYQQIKAGAYDFPSP---EWDTVTPEAKNLINQMLTINPAKRITADQA 285
Query: 314 LQHPYM 319
L+HP++
Sbjct: 286 LKHPWV 291
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 168/347 (48%), Gaps = 61/347 (17%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN--AFENRVDALRTLRE 79
W +EID+ IG+G++G V + +R E VAIK I N AF N+ E
Sbjct: 52 WMDRYEIDS------LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----E 100
Query: 80 LKLLRHL-QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS--QALTNDHCQ 136
++LL + +H+ + V + H + LV+E++ +L+ +++++ + ++ + +
Sbjct: 101 VRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR 160
Query: 137 YFLFQLLRGLKYLHS--ANILHRDLKPGNLLVN--ANCDLKICDFGLARTSNGKNQFMTE 192
F Q+ L +L + +I+H DLKP N+L+ +KI DFG +S Q + +
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQ 217
Query: 193 YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGS 252
+ +R+YR+PE+LL Y +ID+WS+GCI E+ +P+F G ++Q+ I+ +LG
Sbjct: 218 XIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGI 276
Query: 253 RREEDLEFIDNPKARKYIKSLP---------------YTP--------------GTPFSR 283
L+ PKARK+ + LP Y P G P R
Sbjct: 277 PPAHILD--QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGR 334
Query: 284 LYPDA-HPLA-----IDLLQKMLVFDPTKRISVTEALQHPYMSPLYD 324
++ H +A DL+ +ML +DP RI ALQH + D
Sbjct: 335 RAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 170/350 (48%), Gaps = 67/350 (19%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN--AFENRVDALRTLRE 79
W +EID+ IG+G++G V + +R E VAIK I N AF N+ E
Sbjct: 52 WMDRYEIDS------LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQI-----E 100
Query: 80 LKLLRHL-QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS--QALTNDHCQ 136
++LL + +H+ + V + H + LV+E++ +L+ +++++ + ++ + +
Sbjct: 101 VRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTR 160
Query: 137 YFLFQLLRGLKYLHS--ANILHRDLKPGNLLVNANCD-----LKICDFGLARTSNGKNQF 189
F Q+ L +L + +I+H DLKP N+L+ C+ +KI DFG +S Q
Sbjct: 161 KFAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRXAIKIVDFG---SSCQLGQR 214
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINI 249
+ + + +R+YR+PE+LL Y +ID+WS+GCI E+ +P+F G ++Q+ I+ +
Sbjct: 215 IYQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEV 273
Query: 250 LGSRREEDLEFIDNPKARKYIKSLP---------------YTP--------------GTP 280
LG L+ PKARK+ + LP Y P G P
Sbjct: 274 LGIPPAHILD--QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGP 331
Query: 281 FSRLYPDA-HPLA-----IDLLQKMLVFDPTKRISVTEALQHPYMSPLYD 324
R ++ H +A DL+ +ML +DP RI ALQH + D
Sbjct: 332 GGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 143/312 (45%), Gaps = 48/312 (15%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFE----NRVDALR-- 75
W E KY P IGRG +V V+R T + A+K + E +++ +R
Sbjct: 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 76 TLRELKLLRHLQ-HENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTND 133
T RE +LR + H ++I L D S +F ++LV++LM +L + AL+
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESS---SF--MFLVFDLMRKGELFDYLTEKVALSEK 200
Query: 134 HCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLA-RTSNGKNQFMTE 192
+ + LL + +LH+ NI+HRDLKP N+L++ N +++ DFG + G+ + E
Sbjct: 201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRE 258
Query: 193 YVVTRWYRAPELLLCCDN-----YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLII 247
T Y APE+L C + YG +D+W+ G I LL P F + L++I+
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318
Query: 248 NILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKR 307
+Y S P + D DL+ ++L DP R
Sbjct: 319 E------------------GQYQFSSPE---------WDDRSSTVKDLISRLLQVDPEAR 351
Query: 308 ISVTEALQHPYM 319
++ +ALQHP+
Sbjct: 352 LTAEQALQHPFF 363
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
Query: 328 NP 329
P
Sbjct: 274 RP 275
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 226
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 227 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
Query: 328 NP 329
P
Sbjct: 275 RP 276
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
Query: 328 NP 329
P
Sbjct: 274 RP 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 68 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 181
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 182 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 234
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 235 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 316 HPYMSP 321
HP++ P
Sbjct: 271 HPWIKP 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 67
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 68 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 181
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 182 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 234
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 235 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 270
Query: 316 HPYMSP 321
HP++ P
Sbjct: 271 HPWIKP 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPA 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 226
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 227 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
Query: 328 NP 329
P
Sbjct: 275 RP 276
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 226
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 227 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
Query: 328 NP 329
P
Sbjct: 275 RP 276
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 226
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 227 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
Query: 328 NP 329
P
Sbjct: 275 RP 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 226
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 227 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
Query: 328 NP 329
P
Sbjct: 275 RP 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 144/307 (46%), Gaps = 51/307 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRR 254
+ APE++ NY G D+WS+G I LL G P LG +
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASP----------------FLGDTK 222
Query: 255 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEAL 314
+E L N A Y Y + + LA D ++++LV DP KR+++ ++L
Sbjct: 223 QETLA---NVSAVNYEFEDEY---------FSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 315 QHPYMSP 321
QHP++ P
Sbjct: 271 QHPWIKP 277
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENR-VDALRTLRELKLL 83
+D Y + +G G + +V + T + A IKK R V RE+ +L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
+ +QH NVI L +V N DV L+ EL+ +L + ++LT + FL Q+
Sbjct: 69 KEIQHPNVITLHEVY-----ENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +KI DFGLA + N+F + T
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPE 182
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F G + + + N+ E
Sbjct: 183 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSAVNYE 235
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+ E+ N A LA D ++++LV DP KR+++ ++LQ
Sbjct: 236 FEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQDSLQ 271
Query: 316 HPYMSP 321
HP++ P
Sbjct: 272 HPWIKP 277
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
Query: 328 NP 329
P
Sbjct: 274 RP 275
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
Query: 328 NP 329
P
Sbjct: 274 RP 275
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 226
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 227 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 274
Query: 328 NP 329
P
Sbjct: 275 RP 276
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
Query: 328 NP 329
P
Sbjct: 274 RP 275
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 141/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 68 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 224
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 225 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 272
Query: 328 NP 329
P
Sbjct: 273 RP 274
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 142/300 (47%), Gaps = 40/300 (13%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
+ +DVWS G + +L + P + + + E+ D + + Y+
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQ--------------EYSDWKEKKTYL 227
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSSNP 329
P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL + P
Sbjct: 228 --------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRP 275
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 144/310 (46%), Gaps = 51/310 (16%)
Query: 17 HYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRT 76
++ SM+Q LFE +G+GA+ +V V ++ A K IN + D +
Sbjct: 19 YFQSMYQ-LFE---------ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL 68
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHC 135
RE ++ R L+H N++ L D + YL+++L+ +L + I + + +
Sbjct: 69 EREARICRLLKHPNIVRLHDSISEEGHH-----YLIFDLVTGGELFEDIVAREYYSEADA 123
Query: 136 QYFLFQLLRGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTE 192
+ + Q+L + + H ++HRDLKP NLL+ + +K+ DFGLA G+ Q
Sbjct: 124 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 183
Query: 193 YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGS 252
+ T Y +PE+L D YG +D+W+ G I LL P
Sbjct: 184 FAGTPGYLSPEVLR-KDPYGKPVDLWACGVILYILLVGYP-------------------- 222
Query: 253 RREEDLEFIDNPKARKY--IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISV 310
F D + R Y IK+ Y +P + P A DL+ KML +P+KRI+
Sbjct: 223 ------PFWDEDQHRLYQQIKAGAYDFPSP---EWDTVTPEAKDLINKMLTINPSKRITA 273
Query: 311 TEALQHPYMS 320
EAL+HP++S
Sbjct: 274 AEALKHPWIS 283
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 43/282 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISV 310
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITI 255
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 43/282 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISV 310
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITI 255
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 43/282 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 226
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISV 310
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++
Sbjct: 227 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITI 256
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 43/282 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISV 310
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITI 255
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 43/282 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISV 310
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITI 255
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 43/282 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISV 310
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITI 255
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 136/293 (46%), Gaps = 37/293 (12%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y + IG+GA+ +V V T + A K IN + D + RE ++ R L+H N
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN 64
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYL 149
++ L D + F YLV++L+ +L + I + + + + + Q+L + +
Sbjct: 65 IVRLHDSIS---EEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 150 HSANILHRDLKPGNLLVNANCD---LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H ++HRDLKP NLL+ + C +K+ DFGLA G Q + T Y +PE+L
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
+ YG +D+W+ G I LL P F D K
Sbjct: 180 -KEAYGKPVDIWACGVILYILLVGYPPFWDE------------------------DQHKL 214
Query: 267 RKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ IK+ Y +P + P A +L+ +ML +P KRI+ EAL+HP++
Sbjct: 215 YQQIKAGAYDFPSP---EWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 38/289 (13%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL-RTLRELKLLRHLQHEN 90
Y +K +G G++G V + + T +KVA+K IN + D R RE+ LR L+H +
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+I L DV+ ++ ++ +V E +L I ++ + F Q++ ++Y H
Sbjct: 66 IIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP NLL++ + ++KI DFGL+ N F+ + Y APE++
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLY 179
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS G I +L R+ F D E I P K I
Sbjct: 180 AGPEVDVWSCGVILYVMLCRRLPF----------------------DDESI--PVLFKNI 215
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ YT S P A L+++ML+ +P RIS+ E +Q +
Sbjct: 216 SNGVYTLPKFLS-------PGAAGLIKRMLIVNPLNRISIHEIMQDDWF 257
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 38/289 (13%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL-RTLRELKLLRHLQHEN 90
Y +K +G G++G V + + T +KVA+K IN + D R RE+ LR L+H +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+I L DV+ ++ ++ +V E +L I ++ + F Q++ ++Y H
Sbjct: 70 IIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP NLL++ + ++KI DFGL+ N F+ + Y APE++
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLY 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS G I +L R+ F D E I P K I
Sbjct: 184 AGPEVDVWSCGVILYVMLCRRLPF----------------------DDESI--PVLFKNI 219
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ YT S P A L+++ML+ +P RIS+ E +Q +
Sbjct: 220 SNGVYTLPKFLS-------PGAAGLIKRMLIVNPLNRISIHEIMQDDWF 261
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 41/295 (13%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y + +G+GA+ +V + T ++ A K IN + D + RE ++ R L+H N
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYL 149
++ L D + F YLV++L+ +L + I + + + + + Q+L + +
Sbjct: 65 IVRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 150 HSANILHRDLKPGNLLV---NANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H I+HRDLKP NLL+ + +K+ DFGLA G Q + T Y +PE+L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
D YG +D+W+ G I LL P F D +
Sbjct: 180 -KDPYGKPVDMWACGVILYILLVGYP--------------------------PFWDEDQH 212
Query: 267 RKY--IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
R Y IK+ Y +P + P A DL+ KML +P KRI+ +EAL+HP++
Sbjct: 213 RLYQQIKAGAYDFPSP---EWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 38/289 (13%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL-RTLRELKLLRHLQHEN 90
Y +K +G G++G V + + T +KVA+K IN + D R RE+ LR L+H +
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+I L DV+ ++ ++ +V E +L I ++ + F Q++ ++Y H
Sbjct: 76 IIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP NLL++ + ++KI DFGL+ N F+ + Y APE++
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLY 189
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS G I +L R+ F D E I P K I
Sbjct: 190 AGPEVDVWSCGVILYVMLCRRLPF----------------------DDESI--PVLFKNI 225
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ YT S P A L+++ML+ +P RIS+ E +Q +
Sbjct: 226 SNGVYTLPKFLS-------PGAAGLIKRMLIVNPLNRISIHEIMQDDWF 267
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 41/295 (13%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y + +G+GA+ +V + T ++ A K IN + D + RE ++ R L+H N
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYL 149
++ L D + F YLV++L+ +L + I + + + + + Q+L + +
Sbjct: 65 IVRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 150 HSANILHRDLKPGNLLV---NANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H I+HRDLKP NLL+ + +K+ DFGLA G Q + T Y +PE+L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
D YG +D+W+ G I LL P F D +
Sbjct: 180 -KDPYGKPVDMWACGVILYILLVGYP--------------------------PFWDEDQH 212
Query: 267 RKY--IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
R Y IK+ Y +P + P A DL+ KML +P KRI+ +EAL+HP++
Sbjct: 213 RLYQQIKAGAYDFPSP---EWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 38/289 (13%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL-RTLRELKLLRHLQHEN 90
Y +K +G G++G V + + T +KVA+K IN + D R RE+ LR L+H +
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+I L DV+ ++ ++ +V E +L I ++ + F Q++ ++Y H
Sbjct: 75 IIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP NLL++ + ++KI DFGL+ N F+ + Y APE++
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN-FLKTSCGSPNYAAPEVISGKLY 188
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS G I +L R+ F D E I P K I
Sbjct: 189 AGPEVDVWSCGVILYVMLCRRLPF----------------------DDESI--PVLFKNI 224
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ YT S P A L+++ML+ +P RIS+ E +Q +
Sbjct: 225 SNGVYTLPKFLS-------PGAAGLIKRMLIVNPLNRISIHEIMQDDWF 266
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 133/282 (47%), Gaps = 43/282 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GAYG V +VNR T E VA+K ++ + VD ++ E+ + L HENV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 226
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISV 310
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++
Sbjct: 227 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITI 256
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 148/320 (46%), Gaps = 51/320 (15%)
Query: 13 SPGKHYYSMWQTLFEIDT-----KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-A 66
PG H ++ + T +Y + +G+G++G V ++ T ++ A+K I+
Sbjct: 27 GPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 86
Query: 67 FENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKD---VYLVYEL-MDTDLHQ 122
+ + D LRE++LL+ L H N++ L + F+D YLV E+ +L
Sbjct: 87 VKQKTDKESLLREVQLLKQLDHPNIMKLYEF--------FEDKGYFYLVGEVYTGGELFD 138
Query: 123 IIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGL 179
I S + + + Q+L G+ Y+H I+HRDLKP NLL+ + + +++I DFGL
Sbjct: 139 EIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 198
Query: 180 ARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTEC 239
+ T ++ M + + T +Y APE+L Y DVWS G I LL P F G
Sbjct: 199 S-THFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE 255
Query: 240 LNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKM 299
+ LK + + KY LP + A DL++KM
Sbjct: 256 YDILKKV------------------EKGKYTFELPQ---------WKKVSESAKDLIRKM 288
Query: 300 LVFDPTKRISVTEALQHPYM 319
L + P+ RIS +AL H ++
Sbjct: 289 LTYVPSMRISARDALDHEWI 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 148/320 (46%), Gaps = 51/320 (15%)
Query: 13 SPGKHYYSMWQTLFEIDT-----KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-A 66
PG H ++ + T +Y + +G+G++G V ++ T ++ A+K I+
Sbjct: 28 GPGDHLHATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQ 87
Query: 67 FENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKD---VYLVYEL-MDTDLHQ 122
+ + D LRE++LL+ L H N++ L + F+D YLV E+ +L
Sbjct: 88 VKQKTDKESLLREVQLLKQLDHPNIMKLYEF--------FEDKGYFYLVGEVYTGGELFD 139
Query: 123 IIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGL 179
I S + + + Q+L G+ Y+H I+HRDLKP NLL+ + + +++I DFGL
Sbjct: 140 EIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGL 199
Query: 180 ARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTEC 239
+ T ++ M + + T +Y APE+L Y DVWS G I LL P F G
Sbjct: 200 S-THFEASKKMKDKIGTAYYIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANE 256
Query: 240 LNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKM 299
+ LK + + KY LP + A DL++KM
Sbjct: 257 YDILKKV------------------EKGKYTFELPQ---------WKKVSESAKDLIRKM 289
Query: 300 LVFDPTKRISVTEALQHPYM 319
L + P+ RIS +AL H ++
Sbjct: 290 LTYVPSMRISARDALDHEWI 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 46/297 (15%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHE 89
+Y + +G+G++G V ++ T ++ A+K I+ + + D LRE++LL+ L H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 90 NVIALKDVMMPSHRRNFKD---VYLVYEL-MDTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
N++ L + F+D YLV E+ +L I S + + + Q+L G
Sbjct: 87 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+ Y+H I+HRDLKP NLL+ + + +++I DFGL+ T ++ M + + T +Y AP
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAYYIAP 197
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E+L Y DVWS G I LL P F G + LK +
Sbjct: 198 EVL--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---------------- 239
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ KY LP + A DL++KML + P+ RIS +AL H ++
Sbjct: 240 --EKGKYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 44/296 (14%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
YV + IG G+Y V++ TN + A+K I+ + + + + L LR+ QH N+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-----LRYGQHPNI 83
Query: 92 IALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I LKDV + K VYLV ELM +L I + + + L + + ++YLH
Sbjct: 84 ITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 151 SANILHRDLKPGNLLV-----NANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
S ++HRDLKP N+L N C L+ICDFG A+ +N + T + APE+L
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 206 LCCDNYGTSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
Y D+WS+G ++ L G P G + + I+ +GS +
Sbjct: 198 K-RQGYDEGCDIWSLGILLYTMLAGYTPFANGPS--DTPEEILTRIGSGK---------- 244
Query: 265 KARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+ G + A DL+ KML DP +R++ + LQHP+++
Sbjct: 245 --------FTLSGGN-----WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 135/296 (45%), Gaps = 44/296 (14%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
YV + IG G+Y V++ TN + A+K I+ + + + + L LR+ QH N+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-----LRYGQHPNI 83
Query: 92 IALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I LKDV + K VYLV ELM +L I + + + L + + ++YLH
Sbjct: 84 ITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 151 SANILHRDLKPGNLLV-----NANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
S ++HRDLKP N+L N C L+ICDFG A+ +N + T + APE+L
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 206 LCCDNYGTSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
Y D+WS+G ++ L G P G EE L I +
Sbjct: 198 K-RQGYDEGCDIWSLGILLYTMLAGYTPFANGPS-------------DTPEEILTRIGSG 243
Query: 265 KARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
K + G + A DL+ KML DP +R++ + LQHP+++
Sbjct: 244 K-------FTLSGGN-----WNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 140/302 (46%), Gaps = 44/302 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIA 93
++ +G GA G V +VNR T E VA+K ++ + VD ++ E+ + + L HENV+
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
HRR YL E +L I+ + Q F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA N + + + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF--PGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ-HPYMSPLYDPSS 327
Y+ P+ ++ D+ PLA LL K+LV +P+ RI++ + + Y PL +
Sbjct: 226 YL--------NPWKKI--DSAPLA--LLHKILVENPSARITIPDIKKDRWYNKPLKKGAK 273
Query: 328 NP 329
P
Sbjct: 274 RP 275
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 141/297 (47%), Gaps = 46/297 (15%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHE 89
+Y + +G+G++G V ++ T ++ A+K I+ + + D LRE++LL+ L H
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 90 NVIALKDVMMPSHRRNFKD---VYLVYEL-MDTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
N++ L + F+D YLV E+ +L I S + + + Q+L G
Sbjct: 93 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 144
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+ Y+H I+HRDLKP NLL+ + + +++I DFGL+ T ++ M + + T +Y AP
Sbjct: 145 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKMKDKIGTAYYIAP 203
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E+L Y DVWS G I LL P F G + LK +
Sbjct: 204 EVL--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---------------- 245
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ KY LP + A DL++KML + P+ RIS +AL H ++
Sbjct: 246 --EKGKYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 141/293 (48%), Gaps = 45/293 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRT---LRELKLLRHLQHENVIAL 94
IG+GA+ +V +NRET ++ A+K ++ A L T RE + L+H +++ L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 95 KDVMMPSHRRNFKDVYLVYELMD-TDL-HQIIKSSQA---LTNDHCQYFLFQLLRGLKYL 149
+ +Y+V+E MD DL +I+K + A + +++ Q+L L+Y
Sbjct: 92 LETYSSDGM-----LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H NI+HRD+KP N+L+ + + +K+ DFG+A V T + APE++
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
+ YG +DVW G I LL F GT + +L I+ + + NP+
Sbjct: 207 -REPYGKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGIIKGK------YKMNPRQ 255
Query: 267 RKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+I A DL+++ML+ DP +RI+V EAL HP++
Sbjct: 256 WSHISE------------------SAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIALKD 96
+G+G + + +T E A K + + + + E+ + R L H++V+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 97 VMMPSHRRNFKD---VYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
F+D V++V EL L ++ K +ALT +Y+L Q++ G +YLH
Sbjct: 89 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 140
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRDLK GNL +N + ++KI DFGLA + T Y APE +L +
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKGHS 199
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+DVWS+GCI LL KP F T CL + L I K +Y S
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRI-----------------KKNEY--S 239
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNP 329
+P +P+A L+QKML DPT R ++ E L + + Y P+ P
Sbjct: 240 IP-----------KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 285
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIALKD 96
+G+G + + +T E A K + + + + E+ + R L H++V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 97 VMMPSHRRNFKD---VYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
F+D V++V EL L ++ K +ALT +Y+L Q++ G +YLH
Sbjct: 85 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRDLK GNL +N + ++KI DFGLA + T Y APE +L +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKGHS 195
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+DVWS+GCI LL KP F T CL + L I K +Y S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRI-----------------KKNEY--S 235
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNP 329
+P +P+A L+QKML DPT R ++ E L + + Y P+ P
Sbjct: 236 IP-----------KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIALKD 96
+G+G + + +T E A K + + + + E+ + R L H++V+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 97 VMMPSHRRNFKD---VYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
F+D V++V EL L ++ K +ALT +Y+L Q++ G +YLH
Sbjct: 85 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRDLK GNL +N + ++KI DFGLA + T Y APE +L +
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKGHS 195
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+DVWS+GCI LL KP F T CL + L I K +Y S
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRI-----------------KKNEY--S 235
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNP 329
+P +P+A L+QKML DPT R ++ E L + + Y P+ P
Sbjct: 236 IP-----------KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 281
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIALKD 96
+G+G + + +T E A K + + + + E+ + R L H++V+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 97 VMMPSHRRNFKD---VYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
F+D V++V EL L ++ K +ALT +Y+L Q++ G +YLH
Sbjct: 109 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 160
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRDLK GNL +N + ++KI DFGLA + T Y APE +L +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHS 219
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+DVWS+GCI LL KP F T CL + L I K +Y S
Sbjct: 220 FEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRI-----------------KKNEY--S 259
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNP 329
+P +P+A L+QKML DPT R ++ E L + + Y P+ P
Sbjct: 260 IPK-----------HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 305
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 52/339 (15%)
Query: 6 EPPNGIRSPGKHYYSMWQTLFEIDTKYV--PIKP---------IGRGAYGIVCSSVNRET 54
E P G RSP + + F + V P P IG G+ GIVC + R +
Sbjct: 116 EKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSS 175
Query: 55 NEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYE 114
+ VA+KK++ + R + L E+ ++R QHENV+ + + + ++++V E
Sbjct: 176 GKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNSYLVG-----DELWVVME 228
Query: 115 LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKI 174
++ I + + + +L+ L LH+ ++HRD+K ++L+ + +K+
Sbjct: 229 FLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL 288
Query: 175 CDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIF 234
DFG + + V T ++ APEL+ YG +D+WS+G + E++ +P +
Sbjct: 289 SDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPY 347
Query: 235 PGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAID 294
L +K+I + L P+ + K P G
Sbjct: 348 FNEPPLKAMKMIRDNL------------PPRLKNLHKVSPSLKG---------------- 379
Query: 295 LLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQV 333
L ++LV DP +R + E L+HP+++ + PPA +
Sbjct: 380 FLDRLLVRDPAQRATAAELLKHPFLA-----KAGPPASI 413
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIALKD 96
+G+G + + +T E A K + + + + E+ + R L H++V+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 97 VMMPSHRRNFKD---VYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
F+D V++V EL L ++ K +ALT +Y+L Q++ G +YLH
Sbjct: 107 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 158
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRDLK GNL +N + ++KI DFGLA + T Y APE +L +
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHS 217
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+DVWS+GCI LL KP F T CL + L I K +Y S
Sbjct: 218 FEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRI-----------------KKNEY--S 257
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNP 329
+P +P+A L+QKML DPT R ++ E L + + Y P+ P
Sbjct: 258 IP-----------KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 303
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 138/302 (45%), Gaps = 50/302 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHL 86
+ +Y +K +G GAYG V ++ T + AIK I ++ ++ L E+ +L+ L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
H N++ L + +RN+ YLV E+ +L I Q + + Q+L G
Sbjct: 79 DHPNIMKLYEFF--EDKRNY---YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSG 133
Query: 146 LKYLHSANILHRDLKPGNLLVNANCD---LKICDFGLAR--TSNGKNQFMTEYVVTRWYR 200
YLH NI+HRDLKP NLL+ + +KI DFGL+ GK M E + T +Y
Sbjct: 134 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYI 190
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE+L Y DVWS G I LL P F G LK R E +F
Sbjct: 191 APEVLR--KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILK---------RVEKGKF 239
Query: 261 IDNPKARKYIKSLPYTPGTPFSRLYPDAHPL---AIDLLQKMLVFDPTKRISVTEALQHP 317
+P PD + A L++ ML ++P+KRIS EAL HP
Sbjct: 240 SFDP---------------------PDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHP 278
Query: 318 YM 319
++
Sbjct: 279 WI 280
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 140/303 (46%), Gaps = 47/303 (15%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFE-NRVDALR--TLRELKLLR 84
Y P + +GRG +V +++ T ++ A+K I+ +F V LR TL+E+ +LR
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 85 HLQ-HENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQL 142
+ H N+I LKD F +LV++LM +L + L+ + + L
Sbjct: 66 KVSGHPNIIQLKDTY---ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L + LH NI+HRDLKP N+L++ + ++K+ DFG + + + + E T Y AP
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVCGTPSYLAP 179
Query: 203 ELLLCCDN-----YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREED 257
E++ C N YG +D+WS G I LL P F + + L++I+
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM---------- 229
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
S Y G+P Y D DL+ + LV P KR + EAL HP
Sbjct: 230 --------------SGNYQFGSPEWDDYSDT---VKDLVSRFLVVQPQKRYTAEEALAHP 272
Query: 318 YMS 320
+
Sbjct: 273 FFQ 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 140/302 (46%), Gaps = 47/302 (15%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFE-NRVDALR--TLRELKLLR 84
Y P + +GRG +V +++ T ++ A+K I+ +F V LR TL+E+ +LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 85 HLQ-HENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQL 142
+ H N+I LKD F +LV++LM +L + L+ + + L
Sbjct: 79 KVSGHPNIIQLKDTY---ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L + LH NI+HRDLKP N+L++ + ++K+ DFG + + + + E T Y AP
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVCGTPSYLAP 192
Query: 203 ELLLCCDN-----YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREED 257
E++ C N YG +D+WS G I LL P F + + L++I+
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM---------- 242
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
S Y G+P Y D DL+ + LV P KR + EAL HP
Sbjct: 243 --------------SGNYQFGSPEWDDYSDT---VKDLVSRFLVVQPQKRYTAEEALAHP 285
Query: 318 YM 319
+
Sbjct: 286 FF 287
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 135/297 (45%), Gaps = 45/297 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIALKD 96
+G+G + + +T E A K + + + + E+ + R L H++V+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 97 VMMPSHRRNFKD---VYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
F+D V++V EL L ++ K +ALT +Y+L Q++ G +YLH
Sbjct: 83 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRDLK GNL +N + ++KI DFGLA + T Y APE +L +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKGHS 193
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+DVWS+GCI LL KP F T CL + L I K +Y S
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYLRI-----------------KKNEY--S 233
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNP 329
+P +P+A L+QKML DPT R ++ E L + + Y P+ P
Sbjct: 234 IP-----------KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLP 279
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 150/339 (44%), Gaps = 52/339 (15%)
Query: 6 EPPNGIRSPGKHYYSMWQTLFEIDTKYV--PIKP---------IGRGAYGIVCSSVNRET 54
E P G RSP + + F + V P P IG G+ GIVC + R +
Sbjct: 39 EKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSS 98
Query: 55 NEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYE 114
+ VA+KK++ + R + L E+ ++R QHENV+ + + + ++++V E
Sbjct: 99 GKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNSYLVG-----DELWVVME 151
Query: 115 LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKI 174
++ I + + + +L+ L LH+ ++HRD+K ++L+ + +K+
Sbjct: 152 FLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL 211
Query: 175 CDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIF 234
DFG + + V T ++ APEL+ YG +D+WS+G + E++ +P +
Sbjct: 212 SDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPY 270
Query: 235 PGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAID 294
L +K+I + L P+ + K P G
Sbjct: 271 FNEPPLKAMKMIRDNL------------PPRLKNLHKVSPSLKG---------------- 302
Query: 295 LLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQV 333
L ++LV DP +R + E L+HP+++ + PPA +
Sbjct: 303 FLDRLLVRDPAQRATAAELLKHPFLA-----KAGPPASI 336
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 142/307 (46%), Gaps = 49/307 (15%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++ Y + +G G + IV + T ++ A K I ++ V RE+ +L
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQL 142
R ++H N+I L D+ N DV L+ EL+ +L + ++LT D FL Q+
Sbjct: 63 REIRHPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +K+ DFG+A N+F + T
Sbjct: 118 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-GTPE 176
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ APE++ NY G D+WS+G I LL F LG ++
Sbjct: 177 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPF---------------LGETKQ 217
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
E L N A Y Y + + LA D ++++LV DP +R+++ ++L+
Sbjct: 218 ETL---TNISAVNYDFDEEY---------FSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265
Query: 316 HPYMSPL 322
H ++ +
Sbjct: 266 HSWIKAI 272
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 141/310 (45%), Gaps = 60/310 (19%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN------------------------NAFENRVDA 73
IG+G+YG+V + N N A+K ++ + R
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 74 LRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTND 133
+ +E+ +L+ L H NV+ L +V+ N +Y+V+EL++ + + + L+ D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVL---DDPNEDHLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 134 HCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY 193
+++ L++G++YLH I+HRD+KP NLLV + +KI DFG++ G + ++
Sbjct: 138 QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 194 VVTRWYRAPELLLCCDNY--GTSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINIL 250
V T + APE L G ++DVW++G ++ + G+ P + I+ +
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD--------ERIMCLH 249
Query: 251 GSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISV 310
+ + LEF D P + +K DL+ +ML +P RI V
Sbjct: 250 SKIKSQALEFPDQPDIAEDLK----------------------DLITRMLDKNPESRIVV 287
Query: 311 TEALQHPYMS 320
E HP+++
Sbjct: 288 PEIKLHPWVT 297
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 138/301 (45%), Gaps = 40/301 (13%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALK 95
KP+G G++ I V++++N+ A+K I+ E + + + LKL H N++ L
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRME--ANTQKEITALKLCE--GHPNIVKLH 72
Query: 96 DVMMPSHRRNFKD---VYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
+V F D +LV EL++ +L + IK + + Y + +L+ + ++H
Sbjct: 73 EV--------FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 152 ANILHRDLKPGNLLV---NANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCC 208
++HRDLKP NLL N N ++KI DFG AR NQ + T Y APE LL
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LLNQ 183
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ Y S D+WS+G I +L + F + + I+ ++ D F
Sbjct: 184 NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF-------- 235
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
G + + +A DL+Q +L DP KR+ ++ + ++ SSN
Sbjct: 236 --------EGEAWKNVSQEAK----DLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSN 283
Query: 329 P 329
P
Sbjct: 284 P 284
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 137/296 (46%), Gaps = 41/296 (13%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y + +G+GA+ +V V ++ A IN + D + RE ++ R L+H N
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYL 149
++ L D + YL+++L+ +L + I + + + + + Q+L + +
Sbjct: 72 IVRLHDSISEEGHH-----YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H ++HR+LKP NLL+ + +K+ DFGLA G+ Q + T Y +PE+L
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
D YG +D+W+ G I LL P F D +
Sbjct: 187 -KDPYGKPVDLWACGVILYILLVGYP--------------------------PFWDEDQH 219
Query: 267 RKY--IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
R Y IK+ Y +P + P A DL+ KML +P+KRI+ EAL+HP++S
Sbjct: 220 RLYQQIKAGAYDFPSP---EWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 138/299 (46%), Gaps = 50/299 (16%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
+Y +K +G GAYG V ++ T + AIK I ++ ++ L E+ +L+ L H
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
N++ L + +RN+ YLV E+ +L I Q + + Q+L G Y
Sbjct: 65 NIMKLYEFF--EDKRNY---YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 119
Query: 149 LHSANILHRDLKPGNLLVNANCD---LKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPE 203
LH NI+HRDLKP NLL+ + +KI DFGL+ GK M E + T +Y APE
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPE 176
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
+L Y DVWS G I LL P F G + D E +
Sbjct: 177 VLR--KKYDEKCDVWSCGVILYILLCGYPPFGG------------------QTDQEILKR 216
Query: 264 PKARKYIKSLPYTPGTPFSRLYPDAHPL---AIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ K+ + P PD + A L++ ML ++P+KRIS EAL HP++
Sbjct: 217 VEKGKF----SFDP--------PDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 142/306 (46%), Gaps = 51/306 (16%)
Query: 27 EIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKL 82
+++ Y + +G G + IV + T ++ A K I ++ V RE+ +
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQ 141
LR ++H N+I L D+ N DV L+ EL+ +L + ++LT D FL Q
Sbjct: 69 LREIRHPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQ 123
Query: 142 LLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTR 197
+L G+ YLHS I H DLKP N +L++ N +K+ DFG+A N+F + T
Sbjct: 124 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-GTP 182
Query: 198 WYRAPELLLCCDNY---GTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSR 253
+ APE++ NY G D+WS+G I LL G P LG
Sbjct: 183 EFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASP----------------FLGET 222
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
++E L N A Y Y + + LA D ++++LV DP +R+ + ++
Sbjct: 223 KQETL---TNISAVNYDFDEEY---------FSNTSELAKDFIRRLLVKDPKRRMXIAQS 270
Query: 314 LQHPYM 319
L+H ++
Sbjct: 271 LEHSWI 276
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 141/308 (45%), Gaps = 51/308 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN----AFENRVDALRTLRELKLL 83
++ Y + +G G + IV + T ++ A K I + V RE+ +L
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 84 RHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQL 142
R ++H N+I L D+ N DV L+ EL+ +L + ++LT D FL Q+
Sbjct: 84 REIRHPNIITLHDIF-----ENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +K+ DFG+A N+F + T
Sbjct: 139 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-GTPE 197
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRR 254
+ APE++ NY G D+WS+G I LL G P LG +
Sbjct: 198 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASP----------------FLGETK 237
Query: 255 EEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEAL 314
+E L N A Y Y + + LA D ++++LV DP +R+ + ++L
Sbjct: 238 QETL---TNISAVNYDFDEEY---------FSNTSELAKDFIRRLLVKDPKRRMXIAQSL 285
Query: 315 QHPYMSPL 322
+H ++ +
Sbjct: 286 EHSWIKAI 293
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 139/300 (46%), Gaps = 51/300 (17%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKI----NNAFENRVDALRTLRELKLLRHLQHENV 91
+ +G G + IV + T + A K I + A V RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L DV N DV L+ EL+ +L + ++L+ + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
+ I H DLKP N +L++ N +K+ DFGLA +F + T + APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIV- 190
Query: 207 CCDNY---GTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
NY G D+WS+G I LL G P LG ++E L
Sbjct: 191 ---NYEPLGLEADMWSIGVITYILLSGASP----------------FLGDTKQETL---- 227
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
I S+ Y F + LA D ++K+LV + KR+++ EAL+HP+++P+
Sbjct: 228 -----ANITSVSYDFDEEF---FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQ 87
+Y+ + +G+G + + +T E A K + + ++ + + T E+ + + L
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKSLD 100
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDT----DLHQIIKSSQALTNDHCQYFLFQLL 143
+ +V+ F+D VY +++ L ++ K +A+T +YF+ Q +
Sbjct: 101 NPHVVGFHGF--------FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 144 RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPE 203
+G++YLH+ ++HRDLK GNL +N + D+KI DFGLA + + T Y APE
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 212
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
+LC + +D+WS+GCI LL KP F T CL + + I
Sbjct: 213 -VLCKKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRI---------------- 254
Query: 264 PKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLY 323
K +Y S+P +P+A L+++ML DPT R SV E L + + Y
Sbjct: 255 -KKNEY--SVPR-----------HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGY 300
Query: 324 DPSSNP 329
P P
Sbjct: 301 APMRLP 306
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G+ GIVC + R + + VA+KK++ + R + L E+ ++R QHENV+ + +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNS 94
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
+ ++++V E ++ I + + + +L+ L LH+ ++HR
Sbjct: 95 YLVG-----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG + + V T ++ APEL+ YG +D+
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 208
Query: 218 WSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTP 277
WS+G + E++ +P + L +K+I + L P+ + K P
Sbjct: 209 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL------------PPRLKNLHKVSPSLK 256
Query: 278 GTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
G L ++LV DP +R + E L+HP+++ P+S P
Sbjct: 257 G----------------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 293
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G+ GIVC + R + + VA+KK++ + R + L E+ ++R QHENV+ + +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNS 96
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
+ ++++V E ++ I + + + +L+ L LH+ ++HR
Sbjct: 97 YLVG-----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG + + V T ++ APEL+ YG +D+
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 210
Query: 218 WSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTP 277
WS+G + E++ +P + L +K+I + L P+ + K P
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL------------PPRLKNLHKVSPSLK 258
Query: 278 GTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
G L ++LV DP +R + E L+HP+++ P+S P
Sbjct: 259 G----------------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 295
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 143/305 (46%), Gaps = 61/305 (20%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKI----NNAFENRVDALRTLRELKLLRHLQHENV 91
+ +G G + IV + T + A K I + A V RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L DV N DV L+ EL+ +L + ++L+ + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSNG---KNQFMT-EYVVTRWYRA 201
+ I H DLKP N +L++ N +K+ DFGLA +G KN F T E+V A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV------A 186
Query: 202 PELLLCCDNY---GTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREED 257
PE++ NY G D+WS+G I LL G P LG ++E
Sbjct: 187 PEIV----NYEPLGLEADMWSIGVITYILLSGASP----------------FLGDTKQET 226
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
L I S+ Y F + LA D ++K+LV + KR+++ EAL+HP
Sbjct: 227 L---------ANITSVSYDFDEEF---FSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 318 YMSPL 322
+++P+
Sbjct: 275 WITPV 279
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQ 87
+Y+ + +G+G + + +T E A K + + ++ + + T E+ + + L
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKSLD 84
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDT----DLHQIIKSSQALTNDHCQYFLFQLL 143
+ +V+ F+D VY +++ L ++ K +A+T +YF+ Q +
Sbjct: 85 NPHVVGFHGF--------FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 136
Query: 144 RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPE 203
+G++YLH+ ++HRDLK GNL +N + D+KI DFGLA + + T Y APE
Sbjct: 137 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE 196
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
+LC + +D+WS+GCI LL KP F T CL + + I
Sbjct: 197 -VLCKKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRI---------------- 238
Query: 264 PKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLY 323
K +Y S+P +P+A L+++ML DPT R SV E L + + Y
Sbjct: 239 -KKNEY--SVPR-----------HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGY 284
Query: 324 DPSSNP 329
P P
Sbjct: 285 APMRLP 290
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G+ GIVC + R + + VA+KK++ + R + L E+ ++R QHENV+ + +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNS 89
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
+ ++++V E ++ I + + + +L+ L LH+ ++HR
Sbjct: 90 YLVG-----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG + + V T ++ APEL+ YG +D+
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 203
Query: 218 WSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTP 277
WS+G + E++ +P + L +K+I + L P+ + K P
Sbjct: 204 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL------------PPRLKNLHKVSPSLK 251
Query: 278 GTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
G L ++LV DP +R + E L+HP+++ P+S P
Sbjct: 252 G----------------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 288
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G+ GIVC + R + + VA+KK++ + R + L E+ ++R QHENV+ + +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNS 85
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
+ ++++V E ++ I + + + +L+ L LH+ ++HR
Sbjct: 86 YLVG-----DELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG + + V T ++ APEL+ YG +D+
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 199
Query: 218 WSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTP 277
WS+G + E++ +P + L +K+I + L P+ + K P
Sbjct: 200 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL------------PPRLKNLHKVSPSLK 247
Query: 278 GTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
G L ++LV DP +R + E L+HP+++ P+S P
Sbjct: 248 G----------------FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVP 284
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/305 (31%), Positives = 143/305 (46%), Gaps = 61/305 (20%)
Query: 36 KPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+ +G G + IV C S E K K+ + A V RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L DV N DV L+ EL+ +L + ++L+ + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSNG---KNQFMT-EYVVTRWYRA 201
+ I H DLKP N +L++ N +K+ DFGLA +G KN F T E+V A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV------A 186
Query: 202 PELLLCCDNY---GTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREED 257
PE++ NY G D+WS+G I LL G P LG ++E
Sbjct: 187 PEIV----NYEPLGLEADMWSIGVITYILLSGASP----------------FLGDTKQET 226
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
L I S+ Y F + LA D ++K+LV + KR+++ EAL+HP
Sbjct: 227 L---------ANITSVSYDFDEEF---FSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 318 YMSPL 322
+++P+
Sbjct: 275 WITPV 279
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 139/302 (46%), Gaps = 47/302 (15%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFE-NRVDALR--TLRELKLLR 84
Y P + +GRG +V +++ T ++ A+K I+ +F V LR TL+E+ +LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 85 HLQ-HENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQL 142
+ H N+I LKD F +LV++LM +L + L+ + + L
Sbjct: 79 KVSGHPNIIQLKDTY---ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L + LH NI+HRDLKP N+L++ + ++K+ DFG + + + + T Y AP
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LRSVCGTPSYLAP 192
Query: 203 ELLLCCDN-----YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREED 257
E++ C N YG +D+WS G I LL P F + + L++I+
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM---------- 242
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
S Y G+P Y D DL+ + LV P KR + EAL HP
Sbjct: 243 --------------SGNYQFGSPEWDDYSDT---VKDLVSRFLVVQPQKRYTAEEALAHP 285
Query: 318 YM 319
+
Sbjct: 286 FF 287
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 143/305 (46%), Gaps = 61/305 (20%)
Query: 36 KPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+ +G G + IV C S E K K+ + A V RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L DV N DV L+ EL+ +L + ++L+ + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSNG---KNQFMT-EYVVTRWYRA 201
+ I H DLKP N +L++ N +K+ DFGLA +G KN F T E+V A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV------A 186
Query: 202 PELLLCCDNY---GTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREED 257
PE++ NY G D+WS+G I LL G P LG ++E
Sbjct: 187 PEIV----NYEPLGLEADMWSIGVITYILLSGASP----------------FLGDTKQET 226
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
L I ++ Y F + LA D ++K+LV + KR+++ EAL+HP
Sbjct: 227 L---------ANITAVSYDFDEEF---FSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 318 YMSPL 322
+++P+
Sbjct: 275 WITPV 279
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 49/306 (16%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQ 87
+Y+ + +G+G + + +T E A K + + ++ + + T E+ + + L
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKSLD 100
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDT----DLHQIIKSSQALTNDHCQYFLFQLL 143
+ +V+ F+D VY +++ L ++ K +A+T +YF+ Q +
Sbjct: 101 NPHVVGFHGF--------FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 144 RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPE 203
+G++YLH+ ++HRDLK GNL +N + D+KI DFGLA + T Y APE
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPE 212
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
+LC + +D+WS+GCI LL KP F T CL + + I
Sbjct: 213 -VLCKKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRI---------------- 254
Query: 264 PKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLY 323
K +Y S+P +P+A L+++ML DPT R SV E L + + Y
Sbjct: 255 -KKNEY--SVPR-----------HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGY 300
Query: 324 DPSSNP 329
P P
Sbjct: 301 APMRLP 306
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 143/305 (46%), Gaps = 61/305 (20%)
Query: 36 KPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+ +G G + IV C S E K K+ + A V RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L DV N DV L+ EL+ +L + ++L+ + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSNG---KNQFMT-EYVVTRWYRA 201
+ I H DLKP N +L++ N +K+ DFGLA +G KN F T E+V A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV------A 186
Query: 202 PELLLCCDNY---GTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREED 257
PE++ NY G D+WS+G I LL G P LG ++E
Sbjct: 187 PEIV----NYEPLGLEADMWSIGVITYILLSGASP----------------FLGDTKQET 226
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
L I ++ Y F + LA D ++K+LV + KR+++ EAL+HP
Sbjct: 227 L---------ANITAVSYDFDEEF---FSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 318 YMSPL 322
+++P+
Sbjct: 275 WITPV 279
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 49/306 (16%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQ 87
+Y+ + +G+G + + +T E A K + + ++ + + T E+ + + L
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKSLD 100
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDT----DLHQIIKSSQALTNDHCQYFLFQLL 143
+ +V+ F+D VY +++ L ++ K +A+T +YF+ Q +
Sbjct: 101 NPHVVGFHGF--------FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 144 RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPE 203
+G++YLH+ ++HRDLK GNL +N + D+KI DFGLA + T Y APE
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPE 212
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
+LC + +D+WS+GCI LL KP F T CL + + I
Sbjct: 213 -VLCKKGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRI---------------- 254
Query: 264 PKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLY 323
K +Y S+P +P+A L+++ML DPT R SV E L + + Y
Sbjct: 255 -KKNEY--SVPR-----------HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGY 300
Query: 324 DPSSNP 329
P P
Sbjct: 301 APMRLP 306
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 141/312 (45%), Gaps = 41/312 (13%)
Query: 14 PGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVD 72
PG W+ +I Y +G GA+ V + ++ T + VAIK I A E +
Sbjct: 2 PGAVEGPRWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG 61
Query: 73 ALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALT 131
++ E+ +L ++H N++AL D+ +YL+ +L+ +L I T
Sbjct: 62 SMEN--EIAVLHKIKHPNIVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYT 114
Query: 132 NDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSNGKNQ 188
+FQ+L +KYLH I+HRDLKP NLL ++ + + I DFGL++ +
Sbjct: 115 ERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGS 173
Query: 189 FMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
++ T Y APE+L Y ++D WS+G I LL P F N KL
Sbjct: 174 VLSTACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDAKLFEQ 229
Query: 249 ILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRI 308
IL + E D +P+ + D A D ++ ++ DP KR
Sbjct: 230 ILKAEYEFD---------------------SPY---WDDISDSAKDFIRHLMEKDPEKRF 265
Query: 309 SVTEALQHPYMS 320
+ +ALQHP+++
Sbjct: 266 TCEQALQHPWIA 277
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 41/304 (13%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLREL 80
W+ +I Y +G GA+ V + ++ T + VAIK I A E + ++ E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN--EI 67
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
+L ++H N++AL D+ +YL+ +L+ +L I T +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSNGKNQFMTEYVVT 196
FQ+L +KYLH I+HRDLKP NLL ++ + + I DFGL++ + ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGT 181
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREE 256
Y APE+L Y ++D WS+G I LL P F N KL IL + E
Sbjct: 182 PGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDAKLFEQILKAEYEF 237
Query: 257 DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
D +P+ + D A D ++ ++ DP KR + +ALQH
Sbjct: 238 D---------------------SPY---WDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
Query: 317 PYMS 320
P+++
Sbjct: 274 PWIA 277
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 41/304 (13%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLREL 80
W+ +I Y +G GA+ V + ++ T + VAIK I A E + ++ E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN--EI 67
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
+L ++H N++AL D+ +YL+ +L+ +L I T +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSNGKNQFMTEYVVT 196
FQ+L +KYLH I+HRDLKP NLL ++ + + I DFGL++ + ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGT 181
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREE 256
Y APE+L Y ++D WS+G I LL P F N KL IL + E
Sbjct: 182 PGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDAKLFEQILKAEYEF 237
Query: 257 DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
D +P+ + D A D ++ ++ DP KR + +ALQH
Sbjct: 238 D---------------------SPY---WDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
Query: 317 PYMS 320
P+++
Sbjct: 274 PWIA 277
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 41/304 (13%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLREL 80
W+ +I Y +G GA+ V + ++ T + VAIK I A E + ++ E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN--EI 67
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
+L ++H N++AL D+ +YL+ +L+ +L I T +
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLI 122
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSNGKNQFMTEYVVT 196
FQ+L +KYLH I+HRDLKP NLL ++ + + I DFGL++ + ++ T
Sbjct: 123 FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED-PGSVLSTACGT 181
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREE 256
Y APE+L Y ++D WS+G I LL P F N KL IL + E
Sbjct: 182 PGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDAKLFEQILKAEYEF 237
Query: 257 DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
D +P+ + D A D ++ ++ DP KR + +ALQH
Sbjct: 238 D---------------------SPY---WDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273
Query: 317 PYMS 320
P+++
Sbjct: 274 PWIA 277
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 140/322 (43%), Gaps = 66/322 (20%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRV--DALRTLRELKLLRHLQH 88
KY+ +G G+YG V ++ ET + A+K + R+ +E++LLR L+H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQY--FLFQLLRGL 146
+NVI L DV+ ++ +Y+V E + +++ S CQ + QL+ GL
Sbjct: 66 KNVIQLVDVLYNEEKQK---MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGL 122
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLA------------RTSNGKNQFMTEYV 194
+YLHS I+H+D+KPGNLL+ LKI G+A RTS G F
Sbjct: 123 EYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF----- 177
Query: 195 VTRWYRAPELLLCCDNY-GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSR 253
+ PE+ D + G +D+WS G + F G N KL NI
Sbjct: 178 -----QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD---NIYKLFENI---- 225
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEA 313
K ++P G P S DLL+ ML ++P KR S+ +
Sbjct: 226 -------------GKGSYAIPGDCGPPLS-----------DLLKGMLEYEPAKRFSIRQI 261
Query: 314 LQHPYMSPLYDPSSNPPAQVPI 335
QH + +PPA+ P+
Sbjct: 262 RQHSWFR-----KKHPPAEAPV 278
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 137/291 (47%), Gaps = 48/291 (16%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G+Y + +++ TN + A+K I+ + + + + L LR+ QH N+I LKDV
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL-----LRYGQHPNIITLKDV 84
Query: 98 MMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ K VY+V ELM +L I + + LF + + ++YLH+ ++H
Sbjct: 85 Y-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVH 139
Query: 157 RDLKPGNLL-VNANCD---LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
RDLKP N+L V+ + + ++ICDFG A+ +N + T + APE+L Y
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLE-RQGYD 198
Query: 213 TSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK---ARK 268
+ D+WS+G ++ L G P G + EE L I + K +
Sbjct: 199 AACDIWSLGVLLYTMLTGYTPFANGPD-------------DTPEEILARIGSGKFSLSGG 245
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
Y S+ T A DL+ KML DP +R++ L+HP++
Sbjct: 246 YWNSVSDT---------------AKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 152/344 (44%), Gaps = 49/344 (14%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNE-KVAIKKINNAFENRVDALRTLRELKLLRHL 86
+ +Y + +G G +G V ++ + +VA+K I N + R A + LK ++
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK 76
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS--QALTNDHCQYFLFQLLR 144
EN V+M + + +EL+ + + +K + Q H ++ +QL
Sbjct: 77 DKENKFLC--VLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCH 134
Query: 145 GLKYLHSANILHRDLKPGNLL-VNA------------------NCDLKICDFGLARTSNG 185
L++LH + H DLKP N+L VN+ N +++ DFG ++
Sbjct: 135 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG---SATF 191
Query: 186 KNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKL 245
++ T V TR YR PE++L + DVWS+GCI E +F E L +
Sbjct: 192 DHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 250
Query: 246 IINILG---------SRREE-----DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPL 291
+ ILG +R+++ L + +N +Y+K P + H
Sbjct: 251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE-NCKPLKSYMLQDSLEHVQ 309
Query: 292 AIDLLQKMLVFDPTKRISVTEALQHPYMSPL------YDPSSNP 329
DL+++ML FDP +RI++ EAL HP+ + L + S NP
Sbjct: 310 LFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTSRNP 353
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 43/331 (12%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNE-KVAIKKINNAFENRVDALRTLRELKLLRHL 86
+ +Y + +G G +G V ++ + +VA+K I N + R A + LK ++
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK 108
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS--QALTNDHCQYFLFQLLR 144
EN V+M + + +EL+ + + +K + Q H ++ +QL
Sbjct: 109 DKENKFLC--VLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCH 166
Query: 145 GLKYLHSANILHRDLKPGNLL-VNA------------------NCDLKICDFGLARTSNG 185
L++LH + H DLKP N+L VN+ N +++ DFG ++
Sbjct: 167 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG---SATF 223
Query: 186 KNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKL 245
++ T V TR YR PE++L + DVWS+GCI E +F E L +
Sbjct: 224 DHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 282
Query: 246 IINILG---------SRREE-----DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPL 291
+ ILG +R+++ L + +N +Y+K P + H
Sbjct: 283 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE-NCKPLKSYMLQDSLEHVQ 341
Query: 292 AIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
DL+++ML FDP +RI++ EAL HP+ + L
Sbjct: 342 LFDLMRRMLEFDPAQRITLAEALLHPFFAGL 372
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 44/308 (14%)
Query: 20 SMWQTLFEIDTKYVPIKP-IGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTL 77
S W+ E K K +G GA+ V + + T + A+K I A + + ++
Sbjct: 11 SSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN- 69
Query: 78 RELKLLRHLQHENVIALKDVM-MPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHC 135
E+ +LR ++HEN++AL+D+ P+H +YLV +L+ +L I T
Sbjct: 70 -EIAVLRKIKHENIVALEDIYESPNH------LYLVMQLVSGGELFDRIVEKGFYTEKDA 122
Query: 136 QYFLFQLLRGLKYLHSANILHRDLKPGNLLV---NANCDLKICDFGLARTSNGKNQFMTE 192
+ Q+L + YLH I+HRDLKP NLL + + I DFGL++ GK M+
Sbjct: 123 STLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMST 181
Query: 193 YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGS 252
T Y APE+L Y ++D WS+G I LL P F N KL IL +
Sbjct: 182 ACGTPGYVAPEVL-AQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDSKLFEQILKA 237
Query: 253 RREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
E D +P+ + D A D ++ ++ DP KR + +
Sbjct: 238 EYEFD---------------------SPY---WDDISDSAKDFIRNLMEKDPNKRYTCEQ 273
Query: 313 ALQHPYMS 320
A +HP+++
Sbjct: 274 AARHPWIA 281
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 43/331 (12%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNE-KVAIKKINNAFENRVDALRTLRELKLLRHL 86
+ +Y + +G G +G V ++ + +VA+K I N + R A + LK ++
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK 85
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS--QALTNDHCQYFLFQLLR 144
EN V+M + + +EL+ + + +K + Q H ++ +QL
Sbjct: 86 DKENKFLC--VLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCH 143
Query: 145 GLKYLHSANILHRDLKPGNLL-VNA------------------NCDLKICDFGLARTSNG 185
L++LH + H DLKP N+L VN+ N +++ DFG ++
Sbjct: 144 ALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG---SATF 200
Query: 186 KNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKL 245
++ T V TR YR PE++L + DVWS+GCI E +F E L +
Sbjct: 201 DHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM 259
Query: 246 IINILG---------SRREE-----DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPL 291
+ ILG +R+++ L + +N +Y+K P + H
Sbjct: 260 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE-NCKPLKSYMLQDSLEHVQ 318
Query: 292 AIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
DL+++ML FDP +RI++ EAL HP+ + L
Sbjct: 319 LFDLMRRMLEFDPAQRITLAEALLHPFFAGL 349
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 141/295 (47%), Gaps = 43/295 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y +K IG G +G+ ++++NE VA+K I ++D RE+ R L+H N
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKIDE-NVKREIINHRSLRHPN 75
Query: 91 VIALKDVMM-PSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K+V++ P+H + +V E +L + I ++ + D ++F QL+ G+ Y
Sbjct: 76 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 129
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKICDFG +++S +Q + V T Y APE+LL
Sbjct: 130 CHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLL 188
Query: 207 CCDNYGTSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
+ G DVWS G ++ L+G P E N K I IL +
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY----------- 237
Query: 266 ARKYIKSLP-YTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
++P Y +P R L+ ++ V DP KRIS+ E H +
Sbjct: 238 ------AIPDYVHISPECR----------HLISRIFVADPAKRISIPEIRNHEWF 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 143/305 (46%), Gaps = 61/305 (20%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKI----NNAFENRVDALRTLRELKLLRHLQHENV 91
+ +G G + IV + T + A K I + A V RE+ +LR + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
I L DV N DV L+ EL+ +L + ++L+ + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVY-----ENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSNG---KNQFMT-EYVVTRWYRA 201
+ I H DLKP N +L++ N +K+ DFGLA +G KN F T E+V A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV------A 186
Query: 202 PELLLCCDNY---GTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREED 257
PE++ NY G D+WS+G I LL G P LG ++E
Sbjct: 187 PEIV----NYEPLGLEADMWSIGVITYILLSGASP----------------FLGDTKQET 226
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
L I ++ Y F + LA D ++K+LV + KR+++ EAL+HP
Sbjct: 227 L---------ANITAVSYDFDEEF---FSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
Query: 318 YMSPL 322
+++P+
Sbjct: 275 WITPV 279
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 140/295 (47%), Gaps = 43/295 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y +K IG G +G+ ++++NE VA+K I + A RE+ R L+H N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI---AANVKREIINHRSLRHPN 76
Query: 91 VIALKDVMM-PSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K+V++ P+H + +V E +L + I ++ + D ++F QL+ G+ Y
Sbjct: 77 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKICDFG +++S +Q + V T Y APE+LL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLL 189
Query: 207 CCDNYGTSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
+ G DVWS G ++ L+G P E N K I IL +
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY----------- 238
Query: 266 ARKYIKSLP-YTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
++P Y +P R L+ ++ V DP KRIS+ E H +
Sbjct: 239 ------AIPDYVHISPECR----------HLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 142/302 (47%), Gaps = 51/302 (16%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
FE++++ +GRGA IV + T + A+K + + ++ +RT E+ +L
Sbjct: 54 FFEVESE------LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRT--EIGVLL 103
Query: 85 HLQHENVIALKDVM-MPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQL 142
L H N+I LK++ P+ ++ LV EL+ +L I + + Q+
Sbjct: 104 RLSHPNIIKLKEIFETPT------EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI 157
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWY 199
L + YLH I+HRDLKP NLL + LKI DFGL++ M T Y
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTPGY 216
Query: 200 RAPELLLCCDNYGTSIDVWSVGCI-FAELLGRKPIFPGTECLNQLKLIINILGSRREEDL 258
APE+L C YG +D+WSVG I + L G +P + R +
Sbjct: 217 CAPEILRGC-AYGPEVDMWSVGIITYILLCGFEPFY-----------------DERGDQF 258
Query: 259 EFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY 318
F + I + Y +P+ + + A DL++K++V DP KR++ +ALQHP+
Sbjct: 259 MF-------RRILNCEYYFISPW---WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
Query: 319 MS 320
++
Sbjct: 309 VT 310
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 137/297 (46%), Gaps = 46/297 (15%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHE 89
+Y + +G+G++G V ++ T ++ A+K I+ + + D LRE++LL+ L H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 90 NVIALKDVMMPSHRRNFKD---VYLVYEL-MDTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
N+ L + F+D YLV E+ +L I S + + + Q+L G
Sbjct: 87 NIXKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+ Y H I+HRDLKP NLL+ + + +++I DFGL+ T ++ + + T +Y AP
Sbjct: 139 ITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKXKDKIGTAYYIAP 197
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
E+L Y DVWS G I LL P F G + LK +
Sbjct: 198 EVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---------------- 239
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ KY LP + A DL++K L + P+ RIS +AL H ++
Sbjct: 240 --EKGKYTFELPQ---------WKKVSESAKDLIRKXLTYVPSXRISARDALDHEWI 285
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 36/293 (12%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G+ GIVC + + T ++VA+KK++ + R + L E+ ++R H+NV+ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL--FNEVVIMRDYHHDNVVDMYSS 110
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
+ ++++V E ++ I + + + +LR L YLH+ ++HR
Sbjct: 111 YLVG-----DELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ ++ +K+ DFG + + V T ++ APE++ YGT +D+
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP-YGTEVDI 224
Query: 218 WSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTP 277
WS+G + E++ +P + L ++ I + L R + D K ++
Sbjct: 225 WSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVK------DLHKVSSVLRG----- 273
Query: 278 GTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
L MLV +P++R + E L HP++ PS P
Sbjct: 274 -----------------FLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIVP 309
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 45/293 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRT---LRELKLLRHLQHENVIAL 94
IG+G + +V +NRET ++ A+K ++ A L T RE + L+H +++ L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 95 KDVMMPSHRRNFKDVYLVYELMD-TDL-HQIIKSSQA---LTNDHCQYFLFQLLRGLKYL 149
+ +Y+V+E MD DL +I+K + A + +++ Q+L L+Y
Sbjct: 94 LETYSSDGM-----LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H NI+HRD+KP +L+ + + +K+ FG+A V T + APE++
Sbjct: 149 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 208
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
+ YG +DVW G I LL F GT + +L I+ + + NP+
Sbjct: 209 -REPYGKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGIIKGK------YKMNPRQ 257
Query: 267 RKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+I A DL+++ML+ DP +RI+V EAL HP++
Sbjct: 258 WSHISE------------------SAKDLVRRMLMLDPAERITVYEALNHPWL 292
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 45/293 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRT---LRELKLLRHLQHENVIAL 94
IG+G + +V +NRET ++ A+K ++ A L T RE + L+H +++ L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 95 KDVMMPSHRRNFKDVYLVYELMD-TDL-HQIIKSSQA---LTNDHCQYFLFQLLRGLKYL 149
+ +Y+V+E MD DL +I+K + A + +++ Q+L L+Y
Sbjct: 92 LETYSSDGM-----LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H NI+HRD+KP +L+ + + +K+ FG+A V T + APE++
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
+ YG +DVW G I LL F GT + +L I+ + + NP+
Sbjct: 207 -REPYGKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGIIKGK------YKMNPRQ 255
Query: 267 RKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+I A DL+++ML+ DP +RI+V EAL HP++
Sbjct: 256 WSHISE------------------SAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 138/299 (46%), Gaps = 51/299 (17%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN--AFENRVDALRTLRELKLLRHLQH 88
+Y +K IG G +G+ ++ T E VA+K I A + V RE+ R L+H
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ-----REIINHRSLRH 75
Query: 89 ENVIALKDVMM-PSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGL 146
N++ K+V++ P+H + ++ E +L++ I ++ + D ++F QLL G+
Sbjct: 76 PNIVRFKEVILTPTH------LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129
Query: 147 KYLHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSNGKNQFMTEYVVTRWYRAPEL 204
Y HS I HRDLK N L++ + LKICDFG +++S +Q + V T Y APE+
Sbjct: 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEV 188
Query: 205 LLCCDNYGTSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDN 263
LL + G DVWS G ++ L+G P F D
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYP---------------------------FEDP 221
Query: 264 PKARKYIKSLPYTPGTPFSRLYPD---AHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ R Y K++ +S PD P L+ ++ V DP RIS+ E H +
Sbjct: 222 EEPRDYRKTIQRILSVKYS--IPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 43/295 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y +K IG G +G+ ++++NE VA+K I ++D RE+ R L+H N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKIDE-NVKREIINHRSLRHPN 76
Query: 91 VIALKDVMM-PSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K+V++ P+H + +V E +L + I ++ + D ++F QL+ G+ Y
Sbjct: 77 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKIC FG +++S +Q + V T Y APE+LL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ-PKDTVGTPAYIAPEVLL 189
Query: 207 CCDNYGTSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
+ G DVWS G ++ L+G P E N K I IL +
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY----------- 238
Query: 266 ARKYIKSLP-YTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
++P Y +P R L+ ++ V DP KRIS+ E H +
Sbjct: 239 ------AIPDYVHISPECR----------HLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 138/294 (46%), Gaps = 41/294 (13%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y +K IG G +G+ ++++NE VA+K I ++D RE+ R L+H N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERG--EKIDE-NVKREIINHRSLRHPN 76
Query: 91 VIALKDVMM-PSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K+V++ P+H + +V E +L + I ++ + D ++F QL+ G+ Y
Sbjct: 77 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKIC FG +++S +Q + V T Y APE+LL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-VGTPAYIAPEVLL 189
Query: 207 CCDNYGTSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
+ G DVWS G ++ L+G P E N K I IL +
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY----------- 238
Query: 266 ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
++P Y P L+ ++ V DP KRIS+ E H +
Sbjct: 239 ------AIPD---------YVHISPECRHLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 135/291 (46%), Gaps = 48/291 (16%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G+Y + +++ TN + A+K I+ + + + + L LR+ QH N+I LKDV
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEIL-----LRYGQHPNIITLKDV 84
Query: 98 MMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ K VY+V EL +L I + + LF + + ++YLH+ ++H
Sbjct: 85 Y-----DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVH 139
Query: 157 RDLKPGNLL-VNANCD---LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
RDLKP N+L V+ + + ++ICDFG A+ +N + T + APE+L Y
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLE-RQGYD 198
Query: 213 TSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK---ARK 268
+ D+WS+G ++ L G P G + EE L I + K +
Sbjct: 199 AACDIWSLGVLLYTXLTGYTPFANGPD-------------DTPEEILARIGSGKFSLSGG 245
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
Y S+ T A DL+ K L DP +R++ L+HP++
Sbjct: 246 YWNSVSDT---------------AKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 42/288 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+GA+ +V V++ T + A K IN + D + RE ++ R LQH N++ L D
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 98 MMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ +F YLV++L+ +L + I + + + + + Q+L + Y HS I+H
Sbjct: 74 I---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 128
Query: 157 RDLKPGNLLVNANCD---LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
R+LKP NLL+ + +K+ DFGLA N + + T Y +PE+L D Y
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLK-KDPYSK 186
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY--IK 271
+D+W+ G I LL P F D + R Y IK
Sbjct: 187 PVDIWACGVILYILLVGYP--------------------------PFWDEDQHRLYAQIK 220
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ Y +P + P A L+ ML +P KRI+ +AL+ P++
Sbjct: 221 AGAYDYPSP---EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 11/202 (5%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G YGIV + + ++AIK+I L E+ L +HL+H+N++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQY--- 84
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQ---YFLFQLLRGLKYLHSANI 154
+ S N + ++ L +++S D+ Q ++ Q+L GLKYLH I
Sbjct: 85 -LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 155 LHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL-LCCDNYG 212
+HRD+K N+L+N LKI DFG ++ G N + T Y APE++ YG
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 213 TSIDVWSVGCIFAELLGRKPIF 234
+ D+WS+GC E+ KP F
Sbjct: 204 KAADIWSLGCTIIEMATGKPPF 225
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 42/288 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+GA+ +V V++ T + A K IN + D + RE ++ R LQH N++ L D
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 98 MMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ +F YLV++L+ +L + I + + + + + Q+L + Y HS I+H
Sbjct: 73 I---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 127
Query: 157 RDLKPGNLLVNANCD---LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
R+LKP NLL+ + +K+ DFGLA N + + T Y +PE+L D Y
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLK-KDPYSK 185
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY--IK 271
+D+W+ G I LL P F D + R Y IK
Sbjct: 186 PVDIWACGVILYILLVGYP--------------------------PFWDEDQHRLYAQIK 219
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ Y +P + P A L+ ML +P KRI+ +AL+ P++
Sbjct: 220 AGAYDYPSP---EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 42/288 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+GA+ +V V++ T + A K IN + D + RE ++ R LQH N++ L D
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 98 MMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ +F YLV++L+ +L + I + + + + + Q+L + Y HS I+H
Sbjct: 74 I---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 128
Query: 157 RDLKPGNLLVNANCD---LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
R+LKP NLL+ + +K+ DFGLA N + + T Y +PE+L D Y
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLK-KDPYSK 186
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY--IK 271
+D+W+ G I LL P F D + R Y IK
Sbjct: 187 PVDIWACGVILYILLVGYP--------------------------PFWDEDQHRLYAQIK 220
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ Y +P + P A L+ ML +P KRI+ +AL+ P++
Sbjct: 221 AGAYDYPSP---EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G YGIV + + ++AIK+I L E+ L +HL+H+N++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQ---- 69
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF---QLLRGLKYLHSANI 154
+ S N + ++ L +++S D+ Q F Q+L GLKYLH I
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 155 LHRDLKPGNLLVNANCD-LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL-LCCDNYG 212
+HRD+K N+L+N LKI DFG ++ G N + T Y APE++ YG
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 213 TSIDVWSVGCIFAELLGRKPIF 234
+ D+WS+GC E+ KP F
Sbjct: 190 KAADIWSLGCTIIEMATGKPPF 211
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 42/288 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+GA+ +V V++ T + A K IN + D + RE ++ R LQH N++ L D
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 98 MMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ +F YLV++L+ +L + I + + + + + Q+L + Y HS I+H
Sbjct: 97 I---QEESFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 151
Query: 157 RDLKPGNLLVNANCD---LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
R+LKP NLL+ + +K+ DFGLA N + + T Y +PE+L D Y
Sbjct: 152 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLK-KDPYSK 209
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY--IK 271
+D+W+ G I LL P F D + R Y IK
Sbjct: 210 PVDIWACGVILYILLVGYP--------------------------PFWDEDQHRLYAQIK 243
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ Y +P + P A L+ ML +P KRI+ +AL+ P++
Sbjct: 244 AGAYDYPSP---EWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 138/295 (46%), Gaps = 43/295 (14%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+Y +K IG G +G+ +++ NE VA+K I ++D RE+ R L+H N
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERG--EKIDE-NVKREIINHRSLRHPN 76
Query: 91 VIALKDVMM-PSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K+V++ P+H + +V E +L + I ++ + D ++F QL+ G+ Y
Sbjct: 77 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKI DFG ++ S +Q + V T Y APE+LL
Sbjct: 131 AHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-VGTPAYIAPEVLL 189
Query: 207 CCDNYGTSIDVWSVGC-IFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
+ G DVWS G ++ L+G P E N K I IL +
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQ------------ 237
Query: 266 ARKYIKSLP-YTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
++P Y +P R L+ ++ V DP KRIS+ E H +
Sbjct: 238 -----YAIPDYVHISPECR----------HLISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 43/297 (14%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ 87
I ++ ++ +G GA+ V R T + A+K I + R +L E+ +L+ ++
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN--EIAVLKKIK 64
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGL 146
HEN++ L+D+ + YLV +L+ +L I T + Q+L +
Sbjct: 65 HENIVTLEDIYESTTH-----YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAV 119
Query: 147 KYLHSANILHRDLKPGNLLV---NANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPE 203
KYLH I+HRDLKP NLL N + I DFGL++ +N M+ T Y APE
Sbjct: 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME--QNGIMSTACGTPGYVAPE 177
Query: 204 LLLCCDNYGTSIDVWSVGCI-FAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
+L Y ++D WS+G I + L G P + TE
Sbjct: 178 -VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------------------------ 212
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
K + IK Y +PF + D A D + +L DP +R + +AL HP++
Sbjct: 213 -SKLFEKIKEGYYEFESPF---WDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 115/231 (49%), Gaps = 19/231 (8%)
Query: 26 FEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRH 85
F+ KYV ++ IG G++G + E + IK+IN + + + + RE+ +L +
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 86 LQHENVIALKDVMMPSHRRNFKDVYLVYELMD----TDLHQIIKSSQAL--TNDHCQYFL 139
++H N++ +R +F++ +Y +MD DL + I + + + D +
Sbjct: 80 MKHPNIV--------QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWY 199
Q+ LK++H ILHRD+K N+ + + +++ DFG+AR N + + T +Y
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY 191
Query: 200 RAPELLLCCDN--YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
+PE+ C+N Y D+W++GC+ EL K F N + II+
Sbjct: 192 LSPEI---CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS 239
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 16/214 (7%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAI-KKINNAFENRVDALRTLRELKLLRHLQHEN 90
Y + IG G+YG C + R+++ K+ + K+++ + + E+ LLR L+H N
Sbjct: 8 YEVLYTIGTGSYG-RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII----KSSQALTNDHCQYFLFQLLRG 145
++ D ++ R +Y+V E + DL +I K Q L + + QL
Sbjct: 67 IVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 146 LKYLHSAN-----ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
LK H + +LHRDLKP N+ ++ ++K+ DFGLAR N F E+V T +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIF 234
+PE + +Y D+WS+GC+ EL P F
Sbjct: 184 SPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 130/283 (45%), Gaps = 38/283 (13%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G+ GIVC + + + +VA+K ++ + R + L E+ ++R QH NV+ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL--FNEVVIMRDYQHFNVVEMYKS 110
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
+ ++++++ E + I S L + +L+ L YLH+ ++HR
Sbjct: 111 YLVG-----EELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG + V T ++ APE ++ Y T +D+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPE-VISRSLYATEVDI 224
Query: 218 WSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNP-KARKYIKSLPYT 276
WS+G + E++ +P + F D+P +A K ++ P
Sbjct: 225 WSLGIMVIEMVDGEPPY-------------------------FSDSPVQAMKRLRDSP-- 257
Query: 277 PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
P + P+ D L++MLV DP +R + E L HP++
Sbjct: 258 --PPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 149/358 (41%), Gaps = 73/358 (20%)
Query: 13 SPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRV- 71
S ++ Y +L E+ KY IG+G+YG+V ++ +T AIK +N ++
Sbjct: 9 SGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQIN 68
Query: 72 --DALRTLRELKLLRHLQHENVIALKDV----------MMPSHRRNFKDVYLVY------ 113
D R E++L++ L H N+ L +V M H + D V+
Sbjct: 69 PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTG 128
Query: 114 -------------------ELMDTDLHQIIKSSQALTNDH-CQYFLFQLLRGLKYLHSAN 153
E ++ +H +S + + + Q+ L YLH+
Sbjct: 129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG 188
Query: 154 ILHRDLKPGNLLVNAN--CDLKICDFGLART----SNGKNQFMTEYVVTRWYRAPELL-L 206
I HRD+KP N L + N ++K+ DFGL++ +NG+ MT T ++ APE+L
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT 248
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
++YG D WS G + LL FPG + + ++N + L F +NP
Sbjct: 249 TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLN-------KKLCF-ENPN- 299
Query: 267 RKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYD 324
Y PLA DLL +L + +R ALQHP++S D
Sbjct: 300 ------------------YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 40/286 (13%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL-RTLRELKLLRHLQHENVIALKD 96
+G+G++ V + + T +VAIK I+ + + R E+K+ L+H +++ L +
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 97 VMMPSHRRNFKDVYLVYELM-DTDLHQIIKSS-QALTNDHCQYFLFQLLRGLKYLHSANI 154
S+ VYLV E+ + ++++ +K+ + + + ++F+ Q++ G+ YLHS I
Sbjct: 79 YFEDSNY-----VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI 133
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTS 214
LHRDL NLL+ N ++KI DFGLA ++ T Y +PE + +G
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE-IATRSAHGLE 192
Query: 215 IDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLP 274
DVWS+GC+F LL +P F N L + +L I+
Sbjct: 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV--VLADYEMPSFLSIE------------ 238
Query: 275 YTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
A DL+ ++L +P R+S++ L HP+MS
Sbjct: 239 -----------------AKDLIHQLLRRNPADRLSLSSVLDHPFMS 267
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 46/321 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
I +G GA+G V + N+ET+ A K I+ E ++ + E+ +L H N++ L
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKL 99
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANI 154
D + + +D + ++ + LT Q Q L L YLH I
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN---- 210
+HRDLK GN+L + D+K+ DFG++ + Q ++ T ++ APE+++C +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
Y DVWS+G E+ +P P E LN +++++ I
Sbjct: 217 YDYKADVWSLGITLIEMAEIEP--PHHE-LNPMRVLLKI--------------------A 253
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
KS P T P SR + D L+K L + R + ++ LQHP+++ SN P
Sbjct: 254 KSEPPTLAQP-SRWSSNFK----DFLKKCLEKNVDARWTTSQLLQHPFVT----VDSNKP 304
Query: 331 -----AQVPIDLDMDEESGEE 346
A+ ++ + E G+E
Sbjct: 305 IRELIAEAKAEVTEEVEDGKE 325
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 46/321 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
I +G GA+G V + N+ET+ A K I+ E ++ + E+ +L H N++ L
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKL 99
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANI 154
D + + +D + ++ + LT Q Q L L YLH I
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN---- 210
+HRDLK GN+L + D+K+ DFG++ + Q ++ T ++ APE+++C +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
Y DVWS+G E+ +P P E LN +++++ I
Sbjct: 217 YDYKADVWSLGITLIEMAEIEP--PHHE-LNPMRVLLKI--------------------A 253
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
KS P T P SR + D L+K L + R + ++ LQHP+++ SN P
Sbjct: 254 KSEPPTLAQP-SRWSSNFK----DFLKKCLEKNVDARWTTSQLLQHPFVT----VDSNKP 304
Query: 331 -----AQVPIDLDMDEESGEE 346
A+ ++ + E G+E
Sbjct: 305 IRELIAEAKAEVTEEVEDGKE 325
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 46/321 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
I +G GA+G V + N+ET+ A K I+ E ++ + E+ +L H N++ L
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKL 99
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANI 154
D + + +D + ++ + LT Q Q L L YLH I
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN---- 210
+HRDLK GN+L + D+K+ DFG++ + Q ++ T ++ APE+++C +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
Y DVWS+G E+ +P P E LN +++++ I
Sbjct: 217 YDYKADVWSLGITLIEMAEIEP--PHHE-LNPMRVLLKI--------------------A 253
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
KS P T P SR + D L+K L + R + ++ LQHP+++ SN P
Sbjct: 254 KSEPPTLAQP-SRWSSNFK----DFLKKCLEKNVDARWTTSQLLQHPFVT----VDSNKP 304
Query: 331 -----AQVPIDLDMDEESGEE 346
A+ ++ + E G+E
Sbjct: 305 IRELIAEAKAEVTEEVEDGKE 325
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 134/307 (43%), Gaps = 45/307 (14%)
Query: 19 YSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR 78
Y T +I+ Y IGRG++G V +V + T + A KKI F VD + +
Sbjct: 15 YFQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--Q 72
Query: 79 ELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYEL-MDTDLHQIIKSSQALTNDHCQY 137
E+++++ L H N+I L + + D+YLV EL +L + + +
Sbjct: 73 EIEIMKSLDHPNIIRLYETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR 127
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLV---NANCDLKICDFGL-ARTSNGKNQFMTEY 193
+ +L + Y H N+ HRDLKP N L + + LK+ DFGL AR GK M
Sbjct: 128 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTK 185
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGS 252
V T +Y +P++L YG D WS G + LL G P T+ LK+
Sbjct: 186 VGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI------- 236
Query: 253 RREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
RE F + + + P A L++++L P +RI+ +
Sbjct: 237 -REGTFTFPEKD--------------------WLNVSPQAESLIRRLLTKSPKQRITSLQ 275
Query: 313 ALQHPYM 319
AL+H +
Sbjct: 276 ALEHEWF 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 132/299 (44%), Gaps = 45/299 (15%)
Query: 27 EIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL 86
+I+ Y IGRG++G V +V + T + A KKI F VD + +E+++++ L
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSL 63
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYEL-MDTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
H N+I L + + D+YLV EL +L + + + + +L
Sbjct: 64 DHPNIIRLYETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 146 LKYLHSANILHRDLKPGNLLV---NANCDLKICDFGL-ARTSNGKNQFMTEYVVTRWYRA 201
+ Y H N+ HRDLKP N L + + LK+ DFGL AR GK M V T +Y +
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKVGTPYYVS 176
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
P++L YG D WS G + LL G P T+ LK+ RE F
Sbjct: 177 PQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI--------REGTFTF 226
Query: 261 IDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ + + P A L++++L P +RI+ +AL+H +
Sbjct: 227 PEKD--------------------WLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALR-TLRELKLLRHLQHEN 90
+ ++ IG G++G V + + +E VAIKK++ + + + + ++E++ L+ L+H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 91 VIALKDVMMPSHRRNFKDVYLVYEL---MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
I + + H +LV E +DL ++ K + L L+GL
Sbjct: 116 TIQYRGCYLREH-----TAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLA 168
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS N++HRD+K GN+L++ +K+ DFG A N F V T ++ APE++L
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF----VGTPYWMAPEVILA 224
Query: 208 CD--NYGTSIDVWSVGCIFAELLGRKP 232
D Y +DVWS+G EL RKP
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKP 251
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 154/342 (45%), Gaps = 46/342 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVN-RETNEKVAIKKINNAFENRVDALRTLRELKLLRHL 86
+ +Y + +G G +G V V+ R +VA+K I N + + A + L+ +
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEK 90
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN--DHCQYFLFQLLR 144
+N V M + + +EL+ +K + L ++ FQL +
Sbjct: 91 DPDNKNLC--VQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQ 148
Query: 145 GLKYLHSANILHRDLKPGNLL-VNANCDL------------------KICDFGLARTSNG 185
+K+LH + H DLKP N+L VN++ +L ++ DFG ++
Sbjct: 149 AVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFG---SATF 205
Query: 186 KNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKL 245
++ + V TR YRAPE++L + DVWS+GCI E +F + L +
Sbjct: 206 DHEHHSTIVSTRHYRAPEVILEL-GWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 264
Query: 246 IINILG---------SRREE-----DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPL 291
+ ILG +R+++ L++ +N A +Y++ P + + H
Sbjct: 265 MERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRE-NCKPLRRYLTSEAEEHHQ 323
Query: 292 AIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQV 333
DL++ ML ++P KR+++ EALQHP+ + L + PP ++
Sbjct: 324 LFDLIESMLEYEPAKRLTLGEALQHPFFARL---RAEPPNKL 362
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAI-KKINNAFENRVDALRTLRELKLLRHLQHEN 90
Y + IG G+YG C + R+++ K+ + K+++ + + E+ LLR L+H N
Sbjct: 8 YEVLYTIGTGSYG-RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII----KSSQALTNDHCQYFLFQLLRG 145
++ D ++ R +Y+V E + DL +I K Q L + + QL
Sbjct: 67 IVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 146 LKYLHSAN-----ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
LK H + +LHRDLKP N+ ++ ++K+ DFGLAR N F +V T +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIF 234
+PE + +Y D+WS+GC+ EL P F
Sbjct: 184 SPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAI-KKINNAFENRVDALRTLRELKLLRHLQHEN 90
Y + IG G+YG C + R+++ K+ + K+++ + + E+ LLR L+H N
Sbjct: 8 YEVLYTIGTGSYG-RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII----KSSQALTNDHCQYFLFQLLRG 145
++ D ++ R +Y+V E + DL +I K Q L + + QL
Sbjct: 67 IVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 146 LKYLHSAN-----ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
LK H + +LHRDLKP N+ ++ ++K+ DFGLAR N F +V T +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIF 234
+PE + +Y D+WS+GC+ EL P F
Sbjct: 184 SPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALR-TLRELKLLRHLQHEN 90
+ ++ IG G++G V + + +E VAIKK++ + + + + ++E++ L+ L+H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 91 VIALKDVMMPSHRRNFKDVYLVYEL---MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
I + + H +LV E +DL ++ K + L L+GL
Sbjct: 77 TIQYRGCYLREH-----TAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLA 129
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS N++HRD+K GN+L++ +K+ DFG A N F V T ++ APE++L
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF----VGTPYWMAPEVILA 185
Query: 208 CD--NYGTSIDVWSVGCIFAELLGRKP 232
D Y +DVWS+G EL RKP
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKP 212
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 148/333 (44%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 66
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 67 QCPHIVRIVDVYENLYA-GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N +TE T +Y
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYV 184
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 185 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 223
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 224 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 279
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 280 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 310
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 51/303 (16%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ 87
ID ++ + +G GA+G V R + + IK IN ++V + E+++L+ L
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD-RSQVPMEQIEAEIEVLKSLD 78
Query: 88 HENVIALKDVMMPSHRRNFKDVYLVYELMDT----DLHQIIKSSQA----LTNDHCQYFL 139
H N+I + +V F+D + +Y +M+T +L + I S+QA L+ + +
Sbjct: 79 HPNIIKIFEV--------FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSNGKNQFMTEYVVT 196
Q++ L Y HS +++H+DLKP N+L + + +KI DFGLA ++ T T
Sbjct: 131 KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS-DEHSTNAAGT 189
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREE 256
Y APE+ + D+WS G + LL T CL G+ EE
Sbjct: 190 ALYMAPEVF--KRDVTFKCDIWSAGVVMYFLL--------TGCL-------PFTGTSLEE 232
Query: 257 DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
+ + ++ P TP A+DLL++ML DP +R S + L H
Sbjct: 233 VQQKATYKEPNYAVECRPLTPQ-------------AVDLLKQMLTKDPERRPSAAQVLHH 279
Query: 317 PYM 319
+
Sbjct: 280 EWF 282
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 131/289 (45%), Gaps = 44/289 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G +G V T K+A K I D E+ ++ L H N+I L D
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 98 MMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANIL 155
+ D+ LV E +D +II S LT F+ Q+ G++++H IL
Sbjct: 155 FESKN-----DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL 209
Query: 156 HRDLKPGNLL-VNANC-DLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
H DLKP N+L VN + +KI DFGLAR + + + T + APE ++ D
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPE-VVNYDFVSF 267
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE-EDLEFID-NPKARKYIK 271
D+WSVG I LL F G N + + NIL R + ED EF D + +A+++I
Sbjct: 268 PTDMWSVGVIAYMLLSGLSPFLGD---NDAETLNNILACRWDLEDEEFQDISEEAKEFI- 323
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
K+L+ + + RIS +EAL+HP++S
Sbjct: 324 -------------------------SKLLIKEKSWRISASEALKHPWLS 347
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 137/302 (45%), Gaps = 44/302 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G GA+G+V R T A K + E+ + +R +E++ + L+H ++ L D
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPTLVNLHDA 222
Query: 98 MMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANIL 155
+ ++ ++YE M ++ ++ D ++ Q+ +GL ++H N +
Sbjct: 223 F-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277
Query: 156 HRDLKPGNLLVNA--NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
H DLKP N++ + +LK+ DFGL + K Q + T + APE+ G
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEG-KPVGY 335
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSL 273
D+WSVG + LL F G E D E + N +KS
Sbjct: 336 YTDMWSVGVLSYILLSGLSPFGG------------------ENDDETLRN------VKSC 371
Query: 274 PYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQ 332
+ + FS + D D ++K+L+ DP R+++ +AL+HP+++P P + +Q
Sbjct: 372 DWNMDDSAFSGISEDGK----DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD--SQ 425
Query: 333 VP 334
+P
Sbjct: 426 IP 427
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 33/241 (13%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE 89
+ + I +G+GA+G V + N + AIKKI + E ++ + L E+ LL L H+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTI--LSEVMLLASLNHQ 62
Query: 90 NVIALKDVMMPSHRRNF----------KDVYLVYELMDTDLHQIIKSSQALTNDHCQYF- 138
V+ + RRNF +++ E + + S+ L +Y+
Sbjct: 63 YVVRYYAAWL--ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 139 LF-QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSN------------- 184
LF Q+L L Y+HS I+HRDLKP N+ ++ + ++KI DFGLA+ +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 185 -GKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQL 243
G + +T + T Y A E+L +Y ID++S+G IF E++ P G E +N L
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNIL 238
Query: 244 K 244
K
Sbjct: 239 K 239
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 44/289 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ +G G+YG V ++++ET + VAIK++ D ++E+ +++ +V+
Sbjct: 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQV----PVESDLQEIIKEISIMQQCDSPHVVKY 89
Query: 95 KDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK-SSQALTNDHCQYFLFQLLRGLKYLHSA 152
S+ +N D+++V E + II+ ++ LT D L L+GL+YLH
Sbjct: 90 ----YGSYFKN-TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRD+K GN+L+N K+ DFG+A + T ++ APE++ Y
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEI-GYN 203
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
D+WS+G E+ KP + + + +I
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI-------------------------- 237
Query: 273 LPYTPGTPFSR--LYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
P P F + L+ D D +++ LV P +R + T+ LQHP++
Sbjct: 238 -PTNPPPTFRKPELWSDNF---TDFVKQCLVKSPEQRATATQLLQHPFV 282
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 137/302 (45%), Gaps = 44/302 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G GA+G+V R T A K + E+ + +R +E++ + L+H ++ L D
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPTLVNLHDA 116
Query: 98 MMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANIL 155
+ ++ ++YE M ++ ++ D ++ Q+ +GL ++H N +
Sbjct: 117 F-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 171
Query: 156 HRDLKPGNLLVNA--NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
H DLKP N++ + +LK+ DFGL + K Q + T + APE+ G
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAPEVAEG-KPVGY 229
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSL 273
D+WSVG + LL F G E D E + N +KS
Sbjct: 230 YTDMWSVGVLSYILLSGLSPFGG------------------ENDDETLRN------VKSC 265
Query: 274 PYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQ 332
+ + FS + D D ++K+L+ DP R+++ +AL+HP+++P P + +Q
Sbjct: 266 DWNMDDSAFSGISEDGK----DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD--SQ 319
Query: 333 VP 334
+P
Sbjct: 320 IP 321
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 140/307 (45%), Gaps = 42/307 (13%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHENVIALKD 96
IG G + V + + T E VAIK ++ N + + ++T E++ L++L+H+++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT--EIEALKNLRHQHICQLYH 75
Query: 97 VMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANIL 155
V+ +++ +++V E +L I S L+ + + Q++ + Y+HS
Sbjct: 76 VLETANK-----IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYA 130
Query: 156 HRDLKPGNLLVNANCDLKICDFGL-ARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTS 214
HRDLKP NLL + LK+ DFGL A+ K+ + + Y APEL+ G+
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 215 IDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLP 274
DVWS+G + L+ F N + L I+ + D PK
Sbjct: 191 ADVWSMGILLYVLMCGFLPFDDD---NVMALYKKIMRGK-------YDVPKWLS------ 234
Query: 275 YTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPPAQVP 334
P +I LLQ+ML DP KRIS+ L HP++ Y+ ++ P
Sbjct: 235 ---------------PSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYPVEWQSKNP 279
Query: 335 -IDLDMD 340
I LD D
Sbjct: 280 FIHLDDD 286
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 43/292 (14%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL-RTLRELKLLRHLQHEN 90
Y+ +G G +G V + T KVA+K +N +D + + RE++ L+ +H +
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 91 VIALKDVM-MPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
+I L V+ PS D+++V E + +L I + L + Q+L G+ Y
Sbjct: 78 IIKLYQVISTPS------DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY 131
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLAR-TSNGKNQFMTEYVVTRWYRAPELLLC 207
H ++HRDLKP N+L++A+ + KI DFGL+ S+G +F+ + Y APE++
Sbjct: 132 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAPEVISG 189
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKAR 267
G +D+WS G I LL F K I +
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD------------------- 230
Query: 268 KYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ YTP +P I LL+ ML DP KR ++ + +H +
Sbjct: 231 ----GIFYTPQY--------LNPSVISLLKHMLQVDPMKRATIKDIREHEWF 270
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 73
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 74 QCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 191
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 192 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 230
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 231 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 286
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 287 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 317
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 33/241 (13%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE 89
+ + I +G+GA+G V + N + AIKKI + E ++ + L E+ LL L H+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTI--LSEVMLLASLNHQ 62
Query: 90 NVIALKDVMMPSHRRNF----------KDVYLVYELMDTDLHQIIKSSQALTNDHCQYF- 138
V+ + RRNF +++ E + + S+ L +Y+
Sbjct: 63 YVVRYYAAWL--ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 139 LF-QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSN------------- 184
LF Q+L L Y+HS I+HRDLKP N+ ++ + ++KI DFGLA+ +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 185 -GKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQL 243
G + +T + T Y A E+L +Y ID++S+G IF E++ P G E +N L
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNIL 238
Query: 244 K 244
K
Sbjct: 239 K 239
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 67
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 68 QCPHIVRIVDVYENLYA-GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 185
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 186 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 224
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 225 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 280
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 281 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 311
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 74
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 75 QCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 192
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 193 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 231
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 232 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 287
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 288 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 318
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 82
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 83 QCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 200
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 201 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 239
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 240 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 295
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 296 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 326
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 66
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 67 QCPHIVRIVDVYENLYA-GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 184
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 185 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 223
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 224 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 279
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 280 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 310
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 72
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 73 QCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 190
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 191 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 229
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 230 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 285
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 286 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 316
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 142/324 (43%), Gaps = 57/324 (17%)
Query: 27 EIDTKYVPIKPIGRGAYG--IVCSSVNRETNEKVAIKKINNAFENRV-DALRTLR----- 78
+I Y ++ +G GAYG ++C N + + + + K + + R D + +
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 79 ---ELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTND 133
E+ LL+ L H N+I L DV K YLV E + QII + D
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDK-----KYFYLVTEFYEGGELFEQIINRHKF---D 144
Query: 134 HCQY--FLFQLLRGLKYLHSANILHRDLKPGNLLV---NANCDLKICDFGLARTSNGKNQ 188
C + Q+L G+ YLH NI+HRD+KP N+L+ N+ ++KI DFGL+ + K+
Sbjct: 145 ECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS-SFFSKDY 203
Query: 189 FMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
+ + + T +Y APE+L Y DVWS G I LL P F G
Sbjct: 204 KLRDRLGTAYYIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYPPFGG------------ 249
Query: 249 ILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRI 308
+ D + I + KY Y + + +A +L++ ML +D KR
Sbjct: 250 ------QNDQDIIKKVEKGKY-----YFDFNDWKNISDEAK----ELIKLMLTYDYNKRC 294
Query: 309 SVTEALQHPYMSPLYDPSSNPPAQ 332
+ EAL ++ Y + N Q
Sbjct: 295 TAEEALNSRWIKK-YANNINKSDQ 317
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+++++ L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLK NLL++A+ ++KI DFG + N+ T + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAAPELFQGKKY 189
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS+G I L+ F G + L +L+ E + K R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR--------------ERVLRGKYR--- 231
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
+P+ T +LL+K L+ +P+KR ++ + ++ +M+ ++ P
Sbjct: 232 --IPFYMSTDCE-----------NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 331 AQVPI 335
P+
Sbjct: 279 YVAPL 283
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 118
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 119 QCPHIVRIVDVYENLYA-GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 236
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 237 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 275
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 276 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 331
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 332 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 362
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 112
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 113 QCPHIVRIVDVYENLYA-GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 230
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 231 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 269
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 270 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 325
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 326 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 356
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 68
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 69 QCPHIVRIVDVYENLYAGR-KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 186
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 187 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 225
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 226 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 281
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 282 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 312
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 45/333 (13%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 68
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 69 QCPHIVRIVDVYENLYA-GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 186
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D+WS+G I LL P F L
Sbjct: 187 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 225
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 226 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 281
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 282 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 312
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 141/305 (46%), Gaps = 38/305 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K IG+G + V + + T ++VA++ I+ N + RE+++++ L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLK NLL++A+ ++KI DFG + N+ + E+ + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDEFCGSPPYAAPELFQGKKY 189
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS+G I L+ F G + L +L+ E + K R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR--------------ERVLRGKYR--- 231
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
+P+ T +LL+K L+ +P+KR ++ + ++ +M+ ++ P
Sbjct: 232 --IPFYMSTDCE-----------NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 331 AQVPI 335
P+
Sbjct: 279 YVEPL 283
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+++++ L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLK NLL++A+ ++KI DFG + N+ T + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAAPELFQGKKY 189
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS+G I L+ F G + L +L+ E + K R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR--------------ERVLRGKYR--- 231
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
+P+ T +LL+K L+ +P+KR ++ + ++ +M+ ++ P
Sbjct: 232 --IPFYMSTDCE-----------NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 331 AQVPI 335
P+
Sbjct: 279 YVEPL 283
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 149/341 (43%), Gaps = 55/341 (16%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K IG+G + V + + T +VAIK I+ N + RE+++++ L H N+
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L +V+ K +YL+ E ++ + + + + Q++ ++Y H
Sbjct: 74 VKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCC 208
I+HRDLK NLL++A+ ++KI DFG + T GK + + + Y APEL
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDTFCGSPPYAAPELFQGK 185
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
G +DVWS+G I L+ F G + L +L+ E + K R
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR--------------ERVLRGKYR- 229
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ------------- 315
+P+ T +LL++ LV +P KR ++ + ++
Sbjct: 230 ----IPFYMSTDCE-----------NLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 274
Query: 316 HPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEM 356
P++ P D S + + + +E +E + +M E+
Sbjct: 275 KPFVEPELDISDQKRIDIMVGMGYSQEEIQESLSKMKYDEI 315
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+++++ L H N+
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 69 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCH 123
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLK NLL++A+ ++KI DFG + N+ T + + Y APEL
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAAPELFQGKKY 182
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS+G I L+ F G + L +L+ E + K R
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR--------------ERVLRGKYR--- 224
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
+P+ T +LL+K L+ +P+KR ++ + ++ +M+ ++ P
Sbjct: 225 --IPFYMSTDCE-----------NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 271
Query: 331 AQVPI 335
P+
Sbjct: 272 YVEPL 276
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + + + E+ ++R ++ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPN 78
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
S ++HRD+K N+L+ + +K+ DFG + +E V T ++ APE++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV-TRKA 192
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
YG +D+WS+G + E++ +P + L L LI
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----------------------- 229
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
T GTP + + D L + L D KR S E LQH ++
Sbjct: 230 -----TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 148/341 (43%), Gaps = 55/341 (16%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K IG+G + V + + T +VAIK I+ N + RE+++++ L H N+
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L +V+ K +YL+ E ++ + + + + Q++ ++Y H
Sbjct: 77 VKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCC 208
I+HRDLK NLL++A+ ++KI DFG + T GK + + Y APEL
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGK 188
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
G +DVWS+G I L+ F G + L +L+ E + K R
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR--------------ERVLRGKYR- 232
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ------------- 315
+P+ T +LL++ LV +P KR ++ + ++
Sbjct: 233 ----IPFYMSTDCE-----------NLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277
Query: 316 HPYMSPLYDPSSNPPAQVPIDLDMDEESGEEMIREMMLKEM 356
P++ P D S + + + +E +E + +M E+
Sbjct: 278 KPFVEPELDISDQKRIDIMVGMGYSQEEIQESLSKMKYDEI 318
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 130/318 (40%), Gaps = 65/318 (20%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R EL L ++ L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRA-EELMACAGLTSPRIVPLYGA 134
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ R V + EL++ L Q++K L D Y+L Q L GL+YLHS ILH
Sbjct: 135 V-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSNGKNQFMTEYV-VTRWYRAPELLL--CC 208
D+K N+L++++ +CDFG L GK+ +Y+ T + APE++L C
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
D +DVWS C+ +L P T +F P K
Sbjct: 250 D---AKVDVWSSCCMMLHML--NGCHPWT---------------------QFFRGPLCLK 283
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE-------------ALQ 315
P P + P PL +Q+ L +P R+S E L+
Sbjct: 284 IASEPP-----PVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGGLK 338
Query: 316 HPYMSPLYDPSSNPPAQV 333
P+ +P PP Q
Sbjct: 339 SPWRGEYKEPRHPPPNQA 356
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 140/305 (45%), Gaps = 38/305 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K IG+G + V + + T ++VA++ I+ N + RE+++++ L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLK NLL++A+ ++KI DFG + N+ T + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT-FCGSPPYAAPELFQGKKY 189
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS+G I L+ F G + L +L+ E + K R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR--------------ERVLRGKYR--- 231
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
+P+ T +LL+K L+ +P+KR ++ + ++ +M+ ++ P
Sbjct: 232 --IPFYMSTDCE-----------NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 331 AQVPI 335
P+
Sbjct: 279 YVEPL 283
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y ++ +G GA+G+V V + T K IN + +D E+ ++ L H +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKL 110
Query: 92 IALKDVMMPSHRRNFKDVY---LVYELMDTD--LHQIIKSSQALTNDHCQYFLFQLLRGL 146
I L D F+D Y L+ E + +I ++ ++ Q GL
Sbjct: 111 INLHDA--------FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 162
Query: 147 KYLHSANILHRDLKPGNLLVNAN--CDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPEL 204
K++H +I+H D+KP N++ +KI DFGLA N ++ + T + APE
Sbjct: 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN-PDEIVKVTTATAEFAAPE- 220
Query: 205 LLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
++ + G D+W++G + LL F G + L L+ + + D EF ++
Sbjct: 221 IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV-------KRCDWEFDED- 272
Query: 265 KARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
FS + P+A +LLQK +P KR++V +AL+HP++
Sbjct: 273 ---------------AFSSVSPEAKDFIKNLLQK----EPRKRLTVHDALEHPWL 308
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 98
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 213
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I + E D PKAR
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPAAFFPKAR-- 265
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
DL++K+LV D TKR+ E
Sbjct: 266 ------------------------DLVEKLLVLDATKRLGCEE 284
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII----------KLEY-DFPE---- 255
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 256 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 281
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 139/305 (45%), Gaps = 38/305 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+++++ L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLK NLL++A+ ++KI DFG + N+ + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-LDAFCGAPPYAAPELFQGKKY 189
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
G +DVWS+G I L+ F G + L +L+ E + K R
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR--------------ERVLRGKYR--- 231
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSNPP 330
+P+ T +LL+K L+ +P+KR ++ + ++ +M+ ++ P
Sbjct: 232 --IPFYMSTDCE-----------NLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKP 278
Query: 331 AQVPI 335
P+
Sbjct: 279 YVEPL 283
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 113/219 (51%), Gaps = 13/219 (5%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTL-RELKLLRHL 86
I+ +Y + +G G V + + N KVAIK I + + L+ RE+ L
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 87 QHENVIALKDVMMPSHRRNFKD--VYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
H+N++++ DV + +D YLV E ++ L + I+S L+ D F Q+L
Sbjct: 69 SHQNIVSMIDV-------DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQIL 121
Query: 144 RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-TRWYRAP 202
G+K+ H I+HRD+KP N+L+++N LKI DFG+A+ + + T +V+ T Y +P
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLN 241
E + D++S+G + E+L +P F G ++
Sbjct: 182 E-QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS 219
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 24 TLFEIDTKYVPIKPI-GRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+L ID K + ++ + GRGA+G+VC + R + VAIK+I + E + + EL+
Sbjct: 1 SLHMIDYKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKA----FIVELRQ 54
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQAL---TNDHCQYF 138
L + H N++ L + V LV E + L+ ++ ++ L T H +
Sbjct: 55 LSRVNHPNIVKLYGACL-------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 139 LFQLLRGLKYLHSAN---ILHRDLKPGN-LLVNANCDLKICDFGLARTSNGKNQFMTEYV 194
Q +G+ YLHS ++HRDLKP N LLV LKICDFG T+ MT
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTNNK 164
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIF 234
+ + APE+ NY DV+S G I E++ R+ F
Sbjct: 165 GSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 24 TLFEIDTKYVPIKPI-GRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL 82
+L ID K + ++ + GRGA+G+VC + R + VAIK+I + E + + EL+
Sbjct: 2 SLHMIDYKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKA----FIVELRQ 55
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQAL---TNDHCQYF 138
L + H N++ L + V LV E + L+ ++ ++ L T H +
Sbjct: 56 LSRVNHPNIVKLYGACL-------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 108
Query: 139 LFQLLRGLKYLHSAN---ILHRDLKPGN-LLVNANCDLKICDFGLARTSNGKNQFMTEYV 194
Q +G+ YLHS ++HRDLKP N LLV LKICDFG T+ MT
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTNNK 165
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIF 234
+ + APE+ NY DV+S G I E++ R+ F
Sbjct: 166 GSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 38/285 (13%)
Query: 41 GAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMP 100
G +G V + N+ET+ A K I+ E ++ + E+ +L H N++ L D
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKLLDAFYY 78
Query: 101 SHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLK 160
+ + +D + ++ + LT Q Q L L YLH I+HRDLK
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 161 PGNLLVNANCDLKICDFGL-ARTSNGKNQFMTEYVVTRWYRAPELLLCCDN----YGTSI 215
GN+L + D+K+ DFG+ A+ + Q ++ T ++ APE+++C + Y
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 195
Query: 216 DVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPY 275
DVWS+G E+ +P P E LN +++++ I KS P
Sbjct: 196 DVWSLGITLIEMAEIEP--PHHE-LNPMRVLLKI--------------------AKSEPP 232
Query: 276 TPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
T P SR + D L+K L + R + ++ LQHP+++
Sbjct: 233 TLAQP-SRWSSNFK----DFLKKCLEKNVDARWTTSQLLQHPFVT 272
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII----------KLEY-DFPE---- 255
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 256 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 281
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 33/241 (13%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE 89
+ + I +G+GA+G V + N + AIKKI + E ++ + L E+ LL L H+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTI--LSEVXLLASLNHQ 62
Query: 90 NVIALKDVMMPSHRRNF----------KDVYLVYELMDTDLHQIIKSSQALTNDHCQYF- 138
V+ + RRNF +++ E + + S+ L +Y+
Sbjct: 63 YVVRYYAAWL--ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 139 LF-QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSN------------- 184
LF Q+L L Y+HS I+HR+LKP N+ ++ + ++KI DFGLA+ +
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 185 -GKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQL 243
G + +T + T Y A E+L +Y ID +S+G IF E + P G E +N L
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--YPFSTGXERVNIL 238
Query: 244 K 244
K
Sbjct: 239 K 239
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 96
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKS 211
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 256
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 257 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 282
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 45/296 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+ +G GA+G V + N+ET A K I E ++ + E+++L H ++ L
Sbjct: 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY--IVEIEILATCDHPYIVKL 81
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQII--KSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ ++ + K ++++ E I + + LT Q Q+L L +LHS
Sbjct: 82 ----LGAYYHDGK-LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN-- 210
I+HRDLK GN+L+ D+++ DFG++ + Q ++ T ++ APE+++C
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 211 --YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
Y D+WS+G E+ +P P E LN +++++ I
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEP--PHHE-LNPMRVLLKI------------------- 234
Query: 269 YIKSLPYTPGTP--FSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
KS P T TP +S + D +A+D +P R S + L+HP++S +
Sbjct: 235 -AKSDPPTLLTPSKWSVEFRDFLKIALDK-------NPETRPSAAQLLEHPFVSSI 282
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 73
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 188
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 233
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 234 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 259
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 96
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 211
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 256
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 257 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 282
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 144/335 (42%), Gaps = 61/335 (18%)
Query: 3 TPVEPPNGIRSPGKHYYSMWQTLFEIDTKYV-PIKPIGRGAYGIVCSSVNRETNEKVAIK 61
T PP + S K S+ FE+ + PI +GRGAYG+V + + + +A+K
Sbjct: 25 TSSTPPRDLDS--KACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVK 82
Query: 62 KINNAFENRVDALRTLRELKL-LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDL 120
+I A N + R L +L + +R + + + DV++ ELMDT L
Sbjct: 83 RIR-ATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----DVWICMELMDTSL 136
Query: 121 ----HQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA-NILHRDLKPGNLLVNANCDLKIC 175
Q+I Q + D +++ L++LHS +++HRD+KP N+L+NA +K+C
Sbjct: 137 DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMC 196
Query: 176 DFGLARTSNGKNQFMTEYVVT------RWYRAPELL---LCCDNYGTSIDVWSVGCIFAE 226
DFG++ ++ + V + Y APE + L Y D+WS+G E
Sbjct: 197 DFGIS-------GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 249
Query: 227 L-LGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLY 285
L + R P QLK + ++ P P P FS +
Sbjct: 250 LAILRFPYDSWGTPFQQLK--------------QVVEEPS--------PQLPADKFSAEF 287
Query: 286 PDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+D + L + +R + E +QHP+ +
Sbjct: 288 -------VDFTSQCLKKNSKERPTYPELMQHPFFT 315
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 93
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 208
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 253
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 254 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 255
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 256 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 281
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 72
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 187
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 232
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 233 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 258
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 255
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 256 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 281
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 136/296 (45%), Gaps = 45/296 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+ +G GA+G V + N+ET A K I E ++ + E+++L H ++ L
Sbjct: 16 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE--DYIVEIEILATCDHPYIVKL 73
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQII--KSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ ++ + K ++++ E I + + LT Q Q+L L +LHS
Sbjct: 74 ----LGAYYHDGK-LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN-- 210
I+HRDLK GN+L+ D+++ DFG++ + Q ++ T ++ APE+++C
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 211 --YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
Y D+WS+G E+ +P P E LN +++++ I
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEP--PHHE-LNPMRVLLKI------------------- 226
Query: 269 YIKSLPYTPGTP--FSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPL 322
KS P T TP +S + D +A+D +P R S + L+HP++S +
Sbjct: 227 -AKSDPPTLLTPSKWSVEFRDFLKIALDK-------NPETRPSAAQLLEHPFVSSI 274
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 93
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE-LLTEKS 208
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 253
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 254 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 279
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 93
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 208
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 253
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 254 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 255
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 256 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 281
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 70
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 185
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 230
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 231 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 256
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 92
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKS 207
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 252
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 253 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 278
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 71
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 186
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 231
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 232 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 257
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 127/289 (43%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + E+ ++R ++ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
S ++HRD+K N+L+ + +K+ DFG + + V T ++ APE++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV-TRKA 192
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
YG +D+WS+G + E++ +P + L L LI
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----------------------- 229
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
T GTP + + D L + L D KR S E LQH ++
Sbjct: 230 -----TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 92
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 207
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 252
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 253 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 278
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 77
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 192
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 237
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 238 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 263
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 127/289 (43%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + E+ ++R ++ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
S ++HRD+K N+L+ + +K+ DFG + + V T ++ APE++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-TRKA 192
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
YG +D+WS+G + E++ +P + L L LI
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----------------------- 229
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
T GTP + + D L + L D KR S E LQH ++
Sbjct: 230 -----TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 100
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 101 KLYFCFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 215
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 260
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 261 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 286
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ V + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + L + I+ + +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 255
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 256 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 281
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + TE T Y PE++ +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTELCGTLDYLPPEMIE-GRMHD 184
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 224
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 225 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + E+ ++R ++ N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 79
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 80 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
S ++HRD+K N+L+ + +K+ DFG + + V T ++ APE++
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV-TRKA 193
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
YG +D+WS+G + E++ +P + L L LI
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----------------------- 230
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
T GTP + + D L + L D KR S E +QH ++
Sbjct: 231 -----TNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVDALRTLRELKLLR 84
D + I +G G G+V +R + +A K +I A N++ +REL++L
Sbjct: 15 DDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQI-----IRELQVLH 69
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
++ ++ + E MD L Q++K ++ + + +L
Sbjct: 70 ECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVL 124
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
RGL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + +V TR Y AP
Sbjct: 125 RGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMAP 182
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEL-LGRKPIFP 235
E L +Y D+WS+G EL +GR PI P
Sbjct: 183 ERLQGT-HYSVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 121/284 (42%), Gaps = 52/284 (18%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R EL L ++ L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRA-EELMACAGLTSPRIVPLYGA 153
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ R V + EL++ L Q++K L D Y+L Q L GL+YLHS ILH
Sbjct: 154 V-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSNGKNQFMTEYV-VTRWYRAPELLL--CC 208
D+K N+L++++ +CDFG L GK+ +Y+ T + APE++L C
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
D +DVWS C+ +L P T +F P K
Sbjct: 269 D---AKVDVWSSCCMMLHML--NGCHPWT---------------------QFFRGPLCLK 302
Query: 269 YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
P P + P PL +Q+ L +P R+S E
Sbjct: 303 IASEPP-----PVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAE 341
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKIN--NAFENRVDALRTLRELKLLRHLQHENVIA 93
K IGRG + V + VA+KK+ + + + A ++E+ LL+ L H NVI
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA-DCIKEIDLLKQLNHPNVIK 96
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK----SSQALTNDHCQYFLFQLLRGLKY 148
+ + N +V EL D DL ++IK + + + QL L++
Sbjct: 97 YYASFIEDNELN-----IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCC 208
+HS ++HRD+KP N+ + A +K+ D GL R + K V T +Y +PE +
Sbjct: 152 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH-E 210
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPG 236
+ Y D+WS+GC+ E+ + F G
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAF---ENRVDALRTLRELKLLRHLQHENVI 92
K +G G++ + T+ + AIK + EN+V + RE ++ L H +
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 93
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L + F Y + +L + I+ + +++ +++ L+YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + K +V T Y +PE LL +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 208
Query: 211 YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
S D+W++GCI +L+ G P G E L K+I LE+ D P+
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII----------KLEY-DFPE---- 253
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
+ +P A DL++K+LV D TKR+ E
Sbjct: 254 -------------KFFPKAR----DLVEKLLVLDATKRLGCEE 279
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 102/210 (48%), Gaps = 26/210 (12%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRT-LRELKLLRHLQHENVIALKD 96
+G+G +G +RET E + +K++ E + RT L+E+K++R L+H NV+
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDE---ETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 97 VMMPSHRRNFKDVYLVYELMDTDLHQIIKS--SQALTNDHCQYFLFQLLRGLKYLHSANI 154
V+ R NF Y+ L IIKS SQ + F + G+ YLHS NI
Sbjct: 75 VLYKDKRLNFITEYI----KGGTLRGIIKSMDSQYPWSQRVS-FAKDIASGMAYLHSMNI 129
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR------------TSNGKNQFMTEYVVTR--WYR 200
+HRDL N LV N ++ + DFGLAR S K Y V ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGR 230
APE ++ +Y +DV+S G + E++GR
Sbjct: 190 APE-MINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 7/202 (3%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALK 95
K IG+G + V + + T +VA+K I+ N + RE+++++ L H N++ L
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 96 DVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+V+ K +YLV E ++ + + + + Q++ ++Y H I
Sbjct: 81 EVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTS 214
+HRDLK NLL++ + ++KI DFG + N+ T + + Y APEL G
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT-FCGSPPYAAPELFQGKKYDGPE 194
Query: 215 IDVWSVGCIFAELLGRKPIFPG 236
+DVWS+G I L+ F G
Sbjct: 195 VDVWSLGVILYTLVSGSLPFDG 216
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 15/229 (6%)
Query: 6 EPPNGIRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN- 64
EPP + G + E KY + P+G GA+G V ++V++E N++V +K I
Sbjct: 5 EPPKAVELEG-----LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKK 59
Query: 65 -----NAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD 119
+ + + E+ +L ++H N+I + D+ + F + + D
Sbjct: 60 EKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF---ENQGFFQLVMEKHGSGLD 116
Query: 120 LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L I L Y QL+ + YL +I+HRD+K N+++ + +K+ DFG
Sbjct: 117 LFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGS 176
Query: 180 ARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
A F T + T Y APE+L+ G +++WS+G L+
Sbjct: 177 AAYLERGKLFYT-FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV 224
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 142/335 (42%), Gaps = 51/335 (15%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQ-------DCPKARREVELHWRAS 112
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T +
Sbjct: 113 QCPHIVRIVDVYENLYA-GRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + N T T +Y
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 230
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
APE +L + Y S D WS+G I LL P F L
Sbjct: 231 APE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL-------------------- 269
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+P + I+ Y P +S + + L +LL+ +PT+R ++TE HP++
Sbjct: 270 AISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKT----EPTQRXTITEFXNHPWI 325
Query: 320 SPLYDPSSNPPAQVPID----LDMDEESGEEMIRE 350
S Q P+ L D+E E++ E
Sbjct: 326 X-----QSTKVPQTPLHTSRVLKEDKERWEDVKEE 355
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 31/242 (12%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+++ + L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLK NLL++A+ ++KI DFG + N+ + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK-LDAFCGAPPYAAPELFQGKKY 189
Query: 211 YGTSIDVWSVGCIFAELLG----------------------RKPIFPGTECLNQLK--LI 246
G +DVWS+G I L+ R P + T+C N LK LI
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYXSTDCENLLKKFLI 249
Query: 247 IN 248
+N
Sbjct: 250 LN 251
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 132/303 (43%), Gaps = 58/303 (19%)
Query: 34 PIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHLQHENVI 92
PI +GRGAYG+V + + + +A+K+I A N + R L +L + +R + +
Sbjct: 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIR-ATVNSQEQKRLLMDLDISMRTVDCPFTV 69
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDL----HQIIKSSQALTNDHCQYFLFQLLRGLKY 148
+ DV++ ELMDT L Q+I Q + D +++ L++
Sbjct: 70 TFYGALFREG-----DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 149 LHSA-NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVT------RWYRA 201
LHS +++HRD+KP N+L+NA +K+CDFG++ ++ + V + Y A
Sbjct: 125 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS-------GYLVDDVAKDIDAGCKPYMA 177
Query: 202 PELL---LCCDNYGTSIDVWSVGCIFAEL-LGRKPIFPGTECLNQLKLIINILGSRREED 257
PE + L Y D+WS+G EL + R P QLK
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK------------- 224
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
+ ++ P P P FS + +D + L + +R + E +QHP
Sbjct: 225 -QVVEEPS--------PQLPADKFSAEF-------VDFTSQCLKKNSKERPTYPELMQHP 268
Query: 318 YMS 320
+ +
Sbjct: 269 FFT 271
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK IG G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E M D+ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK IG G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E M D+ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHENVIA 93
++ IG+G++G VC +T + A+K +N R + +EL++++ L+H ++
Sbjct: 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 94 LKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
L ++ +D+++V +L+ DL ++ + + + F+ +L+ L YL +
Sbjct: 80 LWYSF-----QDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
I+HRD+KP N+L++ + + I DF +A + Q +T T+ Y APE+ G
Sbjct: 135 RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMAPEMFSSRKGAG 193
Query: 213 TS--IDVWSVGCIFAELL-GRKP 232
S +D WS+G ELL GR+P
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 95 KDVMMPSHRRNFKDVYLV--YELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ Y + T ++ K S+ ++ +L L Y HS
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 153
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE++ +
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIE-GRMHD 210
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 250
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 251 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 295
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 43/296 (14%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ R VYL+ E ++++ ++ ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE++ +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIE-GRMHDE 190
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSL 273
+D+WS+G + E L KP F K I + EF
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT------------ 229
Query: 274 PYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 230 -----------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 132
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T+ T Y PE++ +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIE-GRMHD 189
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 229
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 230 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 128
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T+ T Y PE++ +
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIE-GRMHD 185
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 225
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 226 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T+ T Y PE ++ +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPE-MIEGRMHD 184
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 224
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 225 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 132/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T+ T Y PE ++ +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPE-MIEGRMHD 184
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 224
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 225 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + + + E+ ++R ++ N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI--INEILVMRENKNPN 79
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 80 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
S ++HR++K N+L+ + +K+ DFG + + V T ++ APE++
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV-TRKA 193
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
YG +D+WS+G + E++ +P + L L LI
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI------------------------ 229
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
T GTP + + D L + L D KR S E +QH ++
Sbjct: 230 ----ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 130
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE++ +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIE-GRMHD 187
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 227
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 228 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 128
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE ++ +
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGW--SCHAPSSRRTTLSGTLDYLPPE-MIEGRMHD 185
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 225
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 226 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 91 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 144
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE++ +
Sbjct: 145 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIE-GRMHD 201
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 241
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 242 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 286
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 132
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE++ +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIE-GRMHD 189
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 229
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 230 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 131/305 (42%), Gaps = 54/305 (17%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL-QHEN 90
+ P +G GA G + N VA+K+I + D RE++LLR +H N
Sbjct: 26 FCPKDVLGHGAEGTIVYR-GMFDNRDVAVKRILPECFSFAD-----REVQLLRESDEHPN 79
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ-ALTNDHCQYFLFQLLRGLKYL 149
VI R F+ Y+ EL L + ++ A L Q GL +L
Sbjct: 80 VIRY---FCTEKDRQFQ--YIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 150 HSANILHRDLKPGNLLV---NANCDLK--ICDFGLART-SNGKNQFMTEYVV--TRWYRA 201
HS NI+HRDLKP N+L+ NA+ +K I DFGL + + G++ F V T + A
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIA 194
Query: 202 PELLL--CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLE 259
PE+L C +N ++D++S GC+F ++ G Q +++
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG----------- 243
Query: 260 FIDNPKARKYIKSLPYTPGTPFSRLYPDAHP--LAIDLLQKMLVFDPTKRISVTEALQHP 317
L+P+ H +A +L++KM+ DP KR S L+HP
Sbjct: 244 ------------------ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285
Query: 318 YMSPL 322
+ L
Sbjct: 286 FFWSL 290
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE++ +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIE-GRMHD 184
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 224
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 225 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 269
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 136/312 (43%), Gaps = 46/312 (14%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALK 95
K +G+G++G V + ++TN+ AIK + D + K + L E+
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 96 DVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ N ++ V E ++ DL I+S ++ +++ GL++LHS I
Sbjct: 84 MFCTFQTKEN---LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGI 140
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTS 214
++RDLK N+L++ + +KI DFG+ + + + E+ T Y APE+LL Y S
Sbjct: 141 VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILL-GQKYNHS 199
Query: 215 IDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSLP 274
+D WS G + E+L + F G ++ +L +I +DNP ++++
Sbjct: 200 VDWWSFGVLLYEMLIGQSPFHGQ---DEEELFHSIR----------MDNPFYPRWLEK-- 244
Query: 275 YTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEAL-QHPYMSPL---------YD 324
A DLL K+ V +P KR+ V + QHP + D
Sbjct: 245 ----------------EAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEID 288
Query: 325 PSSNPPAQVPID 336
P P + P D
Sbjct: 289 PPFRPKVKSPFD 300
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 132
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE + +
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEXIE-GRXHD 189
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 229
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 230 ------------FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSSKPSN 274
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 59/334 (17%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + TL E ++L++ +H + A
Sbjct: 13 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 72
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS- 151
LK R F V E + +L + + + D +++ +++ L YLHS
Sbjct: 73 LKYSFQTHDRLCF-----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 127
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
N+++RDLK NL+++ + +KI DFGL + M + T Y APE+L D Y
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND-Y 186
Query: 212 GTSIDVWSVGCIFAELL-GRKPIF-PGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
G ++D W +G + E++ GR P + E L +L L+ E++ F
Sbjct: 187 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---------EEIRF--------- 228
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRIS-----VTEALQHPYMSPL-- 322
P T G P+A L LL+K DP +R+ E +QH + + +
Sbjct: 229 ----PRTLG-------PEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVW 273
Query: 323 ---YDPSSNPP--AQVPIDLD---MDEESGEEMI 348
Y+ +PP QV + D DEE +MI
Sbjct: 274 QHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMI 307
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 129/296 (43%), Gaps = 43/296 (14%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ R VYL+ E ++++ ++ ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKR 133
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
++HRD+KP NLL+ + +LKI DFG + + + + Y PE ++ +
Sbjct: 134 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLD--YLPPE-MIEGRMHDE 190
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSL 273
+D+WS+G + E L KP F K I + EF
Sbjct: 191 KVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT------------ 229
Query: 274 PYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 230 -----------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 274
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 59/334 (17%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + TL E ++L++ +H + A
Sbjct: 14 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 73
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS- 151
LK R F V E + +L + + + D +++ +++ L YLHS
Sbjct: 74 LKYSFQTHDRLCF-----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 128
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
N+++RDLK NL+++ + +KI DFGL + M + T Y APE+L D Y
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND-Y 187
Query: 212 GTSIDVWSVGCIFAELL-GRKPIF-PGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
G ++D W +G + E++ GR P + E L +L L+ E++ F
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---------EEIRF--------- 229
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRIS-----VTEALQHPYMSPL-- 322
P T G P+A L LL+K DP +R+ E +QH + + +
Sbjct: 230 ----PRTLG-------PEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVW 274
Query: 323 ---YDPSSNPP--AQVPIDLD---MDEESGEEMI 348
Y+ +PP QV + D DEE +MI
Sbjct: 275 QHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMI 308
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE ++ +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTXLCGTLDYLPPE-MIEGRMHD 184
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 224
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 225 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 131
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE ++ +
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 188
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 189 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 228
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 229 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 265
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 95 KDVMMPSHRRNFKDVYLV--YELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ Y + T ++ K S+ ++ +L L Y HS
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 153
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + + T Y PE++ +
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPEMIE-GRMHD 210
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 250
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 251 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 295
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 73 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 126
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE ++ +
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 183
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 184 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 223
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 224 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 260
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 59/334 (17%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + TL E ++L++ +H + A
Sbjct: 15 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 74
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS- 151
LK R F V E + +L + + + D +++ +++ L YLHS
Sbjct: 75 LKYSFQTHDRLCF-----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
N+++RDLK NL+++ + +KI DFGL + M + T Y APE+L D Y
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND-Y 188
Query: 212 GTSIDVWSVGCIFAELL-GRKPIF-PGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
G ++D W +G + E++ GR P + E L +L L+ E++ F
Sbjct: 189 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---------EEIRF--------- 230
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRIS-----VTEALQHPYMSPL-- 322
P T G P+A L LL+K DP +R+ E +QH + + +
Sbjct: 231 ----PRTLG-------PEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVW 275
Query: 323 ---YDPSSNPP--AQVPIDLD---MDEESGEEMI 348
Y+ +PP QV + D DEE +MI
Sbjct: 276 QHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMI 309
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 130
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE ++ +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 187
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 227
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 228 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 10/218 (4%)
Query: 35 IKPIGRGAYGIV--CSSVNR-ETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+K +G+G++G V V R ++ A+K + A D +RT E +L + H V
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFV 92
Query: 92 IALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L + +YL+ + + DL + T + +++L +L GL +LH
Sbjct: 93 VKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
S I++RDLKP N+L++ +K+ DFGL++ + + + T Y APE ++
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE-VVNRQG 206
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
+ S D WS G + E+L F G + + LI+
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILK 244
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 49/291 (16%)
Query: 36 KPIGRGAYGIVCSSVNRETNEK--VAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVI 92
+P+G+G +G V + RE N K +A+K + A + LR E+++ HL+H N++
Sbjct: 14 RPLGKGKFGNVY--LAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 93 ALKDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
L S R VYL+ E + T ++ K S+ ++ +L L Y H
Sbjct: 72 RLYGYFHDSTR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH 125
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
S ++HRD+KP NLL+ + +LKI DFG + + + T Y PE ++
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPE-MIEGRM 182
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
+ +D+WS+G + E L KP F + K I + EF
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV---------EFT--------- 224
Query: 271 KSLPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 225 --------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHENVIALKD 96
IG GA +V ++ EKVAIK+IN + +D L L+E++ + H N++
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL--LKEIQAMSQCHHPNIV---- 76
Query: 97 VMMPSHRRNF---KDVYLVYELM------DTDLHQIIKS---SQALTNDHCQYFLFQLLR 144
S+ +F +++LV +L+ D H + K S L L ++L
Sbjct: 77 ----SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNG---KNQFMTEYVVTRWY 199
GL+YLH +HRD+K GN+L+ + ++I DFG++ + G +N+ +V T +
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 192
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEL 227
APE++ Y D+WS G EL
Sbjct: 193 MAPEVMEQVRGYDFKADIWSFGITAIEL 220
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + T+ E ++L++ +H + A
Sbjct: 15 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 74
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
LK R F V E + +L + + T + +++ +++ L+YLHS
Sbjct: 75 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 129
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + M + T Y APE+L D YG
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND-YG 188
Query: 213 TSIDVWSVGCIFAELL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + T+ E ++L++ +H + A
Sbjct: 13 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 72
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
LK R F V E + +L + + T + +++ +++ L+YLHS
Sbjct: 73 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + M + T Y APE+L D YG
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YG 186
Query: 213 TSIDVWSVGCIFAELL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPFY 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 130
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T Y PE++ +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEMIE-GRMHD 187
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 227
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 228 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + T+ E ++L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
LK R F V E + +L + + T + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAELL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + T+ E ++L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
LK R F V E + +L + + T + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAELL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 45/289 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 130
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + + T Y PE ++ +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPE-MIEGRMHD 187
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 227
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 228 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHENVIALKD 96
IG GA +V ++ EKVAIK+IN + +D L L+E++ + H N++
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL--LKEIQAMSQCHHPNIV---- 71
Query: 97 VMMPSHRRNF---KDVYLVYELM------DTDLHQIIKS---SQALTNDHCQYFLFQLLR 144
S+ +F +++LV +L+ D H + K S L L ++L
Sbjct: 72 ----SYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNG---KNQFMTEYVVTRWY 199
GL+YLH +HRD+K GN+L+ + ++I DFG++ + G +N+ +V T +
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCW 187
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEL 227
APE++ Y D+WS G EL
Sbjct: 188 MAPEVMEQVRGYDFKADIWSFGITAIEL 215
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + T+ E ++L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
LK R F V E + +L + + T + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAELL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + T+ E ++L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
LK R F V E + +L + + T + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAELL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + T+ E ++L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
LK R F V E + +L + + T + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAELL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 129
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI +FG + + + T T Y PE++ +
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEMIE-GRMHD 186
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 226
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 227 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 271
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 17/204 (8%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 72
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 129
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR----WYRAPEL 204
L + +HRDL N+LV +KI DFGL + +F WY APE
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APE- 187
Query: 205 LLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELF 211
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 130
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI +FG + + + T T Y PE ++ +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 187
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 227
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 228 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 272
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 45/289 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + ++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 71 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T T Y PE ++ +
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 181
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 182 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 221
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 222 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 258
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 148/333 (44%), Gaps = 59/333 (17%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + TL E ++L++ +H + A
Sbjct: 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS- 151
LK R F V E + +L + + + D +++ +++ L YLHS
Sbjct: 213 LKYSFQTHDRLCF-----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 267
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
N+++RDLK NL+++ + +KI DFGL + M + T Y APE+L D Y
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND-Y 326
Query: 212 GTSIDVWSVGCIFAELL-GRKPIF-PGTECLNQLKLIINILGSRREEDLEFIDNPKARKY 269
G ++D W +G + E++ GR P + E L +L L+ E++ F
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---------EEIRF--------- 368
Query: 270 IKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRIS-----VTEALQHPYMSPL-- 322
P T G P+A L LL+K DP +R+ E +QH + + +
Sbjct: 369 ----PRTLG-------PEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVW 413
Query: 323 ---YDPSSNPP--AQVPIDLD---MDEESGEEM 347
Y+ +PP QV + D DEE +M
Sbjct: 414 QHVYEKKLSPPFKPQVTSETDTRYFDEEFTAQM 446
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 45/288 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + R++ +A+K + + LR E+++ HL+H N++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSK 131
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ +N +LKI DFG + + + T T Y PE ++ +
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPE-MIEGRMHD 188
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L P F +A Y ++
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPF------------------------------EAHTYQET 218
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
F+ +PD A DL+ ++L + ++R+++ E L+HP++
Sbjct: 219 YRRISRVEFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 129
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T Y PE++ +
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIE-GRMHD 186
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 226
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 227 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 271
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 45/289 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T Y PE ++ +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPE-MIEGRMHD 184
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 224
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 225 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 52/320 (16%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHENVIA 93
+K +G+G +G V + T A+K + + + TL E ++L++ +H + A
Sbjct: 156 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS-A 152
LK R F Y +L + + + D +++ +++ L YLHS
Sbjct: 216 LKYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK 271
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
N+++RDLK NL+++ + +KI DFGL + M + T Y APE+L D YG
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND-YG 330
Query: 213 TSIDVWSVGCIFAELL-GRKPIF-PGTECLNQLKLIINILGSRREEDLEFIDNPKARKYI 270
++D W +G + E++ GR P + E L +L L+ E++ F
Sbjct: 331 RAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM---------EEIRF---------- 371
Query: 271 KSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRIS-----VTEALQHPYMSPL--- 322
P T G P+A L LL+K DP +R+ E +QH + + +
Sbjct: 372 ---PRTLG-------PEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVWQ 417
Query: 323 --YDPSSNPPAQVPIDLDMD 340
Y+ +PP + + + D
Sbjct: 418 HVYEKKLSPPFKPQVTSETD 437
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK IG G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 46/298 (15%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVDALRTLRELKLLR 84
D + I +G G G+V ++ + +A K +I A N++ +REL++L
Sbjct: 24 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 78
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
++ ++ + E MD L Q++K + + ++
Sbjct: 79 ECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 133
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + +V TR Y +P
Sbjct: 134 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 191
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEL-LGRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
E L +Y D+WS+G E+ +GR PI G+ + +L L++I
Sbjct: 192 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFEL------------LDYI 238
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
N P P FS + D + K L+ +P +R + + + H ++
Sbjct: 239 VNEPP-------PKLPSGVFSLEFQ-------DFVNKCLIKNPAERADLKQLMVHAFI 282
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 136/319 (42%), Gaps = 52/319 (16%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
++ K +G+G++G V + ++TN+ AIK + D + K + L E+
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ N ++ V E ++ DL I+S ++ +++ GL++LH
Sbjct: 79 FLTHMFCTFQTKEN---LFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
S I++RDLK N+L++ + +KI DFG+ + + + + T Y APE+LL
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL-GQK 194
Query: 211 YGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF---IDNPKAR 267
Y S+D WS G + E+L + F G + EE+L +DNP
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQD----------------EEELFHSIRMDNPFYP 238
Query: 268 KYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEAL-QHPYMSPL---- 322
++++ A DLL K+ V +P KR+ V + QHP +
Sbjct: 239 RWLEK------------------EAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEE 280
Query: 323 -----YDPSSNPPAQVPID 336
DP P + P D
Sbjct: 281 LERKEIDPPFRPKVKSPFD 299
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 45/289 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T Y PE ++ +
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPE-MIEGRMHD 184
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 224
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 225 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 261
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 45/297 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 128
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T Y PE++ +
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPEMIE-GRMHD 185
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 186 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 225
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMSPLYDPSSN 328
+PD A DL+ ++L +P++R + E L+HP+++ SN
Sbjct: 226 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPSN 270
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 128/289 (44%), Gaps = 45/289 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + +++ +A+K + A + LR E+++ HL+H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCHSK 130
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ + +LKI DFG + + + T Y PE ++ +
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPE-MIEGRMHD 187
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L KP F K I + EF
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV---------EFT----------- 227
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+PD A DL+ ++L +P++R + E L+HP+++
Sbjct: 228 ------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 264
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 18/210 (8%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ +G G YG V + +T + AIK ++ + + + + LK H H N+
Sbjct: 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNIATY 86
Query: 95 KDVMMPSHRRNFKD-VYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLH 150
+ + D ++LV E + +IK+++ L + Y ++LRGL +LH
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLA----RTSNGKNQFMTEYVVTRWYRAPELLL 206
++HRD+K N+L+ N ++K+ DFG++ RT +N F + T ++ APE++
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTF----IGTPYWMAPEVIA 202
Query: 207 CCDN----YGTSIDVWSVGCIFAELLGRKP 232
C +N Y D+WS+G E+ P
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 142/298 (47%), Gaps = 43/298 (14%)
Query: 27 EIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL 86
E+ KY+ + +GRG +GIV V + + K + D + +E+ +L
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV---KGTDQVLVKKEISILNIA 58
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTND-HCQYFLFQLLR 144
+H N++ L + + +++ +++E + D+ + I +S N+ ++ Q+
Sbjct: 59 RHRNILHLHESF-----ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCE 113
Query: 145 GLKYLHSANILHRDLKPGNLLVNA--NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
L++LHS NI H D++P N++ + +KI +FG AR + F + +Y AP
Sbjct: 114 ALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYY-AP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFI 261
E + D T+ D+WS+G + LL G P T NQ ++I NI+ + E+
Sbjct: 173 E-VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET---NQ-QIIENIMNA------EYT 221
Query: 262 DNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ +A K I S+ A+D + ++LV + R++ +EALQHP++
Sbjct: 222 FDEEAFKEI-SIE-----------------AMDFVDRLLVKERKSRMTASEALQHPWL 261
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 98/199 (49%), Gaps = 8/199 (4%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTL-RELKLLRHLQHEN 90
YV +G G +G V ++ T KVA+K +N +D + + RE++ L+ +H +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYL 149
+I L V+ D ++V E + +L I + + Q+L + Y
Sbjct: 73 IIKLYQVISTP-----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
H ++HRDLKP N+L++A+ + KI DFGL+ + +F+ + + Y APE++
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGSPNYAAPEVISGRL 186
Query: 210 NYGTSIDVWSVGCIFAELL 228
G +D+WS G I LL
Sbjct: 187 YAGPEVDIWSCGVILYALL 205
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMP---SHRRNFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMP---SHRRNFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 38 IGRGAYGIVCSS--VNRETNE-KVAIKKINNAFE-NRVDALRTLRELKLLRHLQHENVIA 93
IG+G +G+V +++ N + AIK ++ E +V+A LRE L+R L H NV+A
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF--LREGLLMRGLNHPNVLA 86
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQA-LTNDHCQYFLFQLLRGLKYLHSA 152
L +M+P V L Y + DL Q I+S Q T F Q+ RG++YL
Sbjct: 87 LIGIMLPP--EGLPHVLLPY-MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN-- 210
+HRDL N +++ + +K+ DFGLAR + + + R R P ++
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ--HRHARLPVKWTALESLQ 201
Query: 211 ---YGTSIDVWSVGCIFAELLGR 230
+ T DVWS G + ELL R
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTR 224
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y +M+ ++ ++ + H +++ Q++ +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMP---SHRRNFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 88
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 148
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 204
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 67 IKTLGTGSFGRVMLVKHKETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 116
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 176
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 232
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 75
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF--QLLRGLKY 148
++ K V + RRN K L+ E + + + A DH + + Q+ +G++Y
Sbjct: 76 IVKYKGVCYSAGRRNLK---LIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 190
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 191 -SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 10/223 (4%)
Query: 30 TKYVPIKPIGRGAYG---IVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL 86
+++ +K +G+G++G +V + + A+K + A D +RT E +L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
H ++ L + +YL+ + + DL + T + +++L +L
Sbjct: 84 NHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
L +LHS I++RDLKP N+L++ +K+ DFGL++ S + + T Y APE +
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-V 197
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
+ + S D WS G + E+L F G + + +I+
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 73
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 130
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR-------WYRA 201
L + +HR+L N+LV +KI DFGL + ++ Y V WY A
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEY---YKVKEPGESPIFWY-A 186
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAELL 228
PE L + + DVWS G + EL
Sbjct: 187 PE-SLTESKFSVASDVWSFGVVLYELF 212
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKEIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y +M+ ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +K+ DFGLA+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 112/221 (50%), Gaps = 21/221 (9%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
Y ++D W++G + E+ P F E + + I++
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVS 252
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 8/199 (4%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTL-RELKLLRHLQHEN 90
YV +G G +G V ++ T KVA+K +N +D + + RE++ L+ +H +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYL 149
+I L V+ D ++V E + +L I + + Q+L + Y
Sbjct: 73 IIKLYQVISTP-----TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYC 127
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
H ++HRDLKP N+L++A+ + KI DFGL+ + +F+ + Y APE++
Sbjct: 128 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGSPNYAAPEVISGRL 186
Query: 210 NYGTSIDVWSVGCIFAELL 228
G +D+WS G I LL
Sbjct: 187 YAGPEVDIWSCGVILYALL 205
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 35 IKPIGRGAYGIVCSS---VNRETNEKVAIKKINNAF--ENRVDALRTLRELKLLRHLQHE 89
++ +G+G YG V T + A+K + A N D T E +L ++H
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ L + +YL+ E L +L ++ D ++L ++ L +
Sbjct: 82 FIVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCC 208
LH I++RDLKP N+++N +K+ DFGL + S + T Y APE+L+
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINIL 250
+ ++D WS+G + ++L P F G N+ K I IL
Sbjct: 197 -GHNRAVDWWSLGALMYDMLTGAPPFTGE---NRKKTIDKIL 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y +M+ ++ ++ + H +++ Q++ +
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++ET A+K ++ + + +LK + H +E I L
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 88
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 148
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 204
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 205 SKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 35 IKPIGRGAYGIVCSS---VNRETNEKVAIKKINNAF--ENRVDALRTLRELKLLRHLQHE 89
++ +G+G YG V T + A+K + A N D T E +L ++H
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ L + +YL+ E L +L ++ D ++L ++ L +
Sbjct: 82 FIVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCC 208
LH I++RDLKP N+++N +K+ DFGL + S + T Y APE+L+
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINIL 250
+ ++D WS+G + ++L P F G N+ K I IL
Sbjct: 197 -GHNRAVDWWSLGALMYDMLTGAPPFTGE---NRKKTIDKIL 234
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 127/303 (41%), Gaps = 58/303 (19%)
Query: 34 PIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHLQHENVI 92
PI +GRGAYG+V + + + A+K+I A N + R L +L + R + +
Sbjct: 38 PIXELGRGAYGVVEKXRHVPSGQIXAVKRIR-ATVNSQEQKRLLXDLDISXRTVDCPFTV 96
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTDL----HQIIKSSQALTNDHCQYFLFQLLRGLKY 148
+ DV++ EL DT L Q+I Q + D +++ L++
Sbjct: 97 TFYGALFREG-----DVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 151
Query: 149 LHSA-NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVT------RWYRA 201
LHS +++HRD+KP N+L+NA +K CDFG++ ++ + V + Y A
Sbjct: 152 LHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS-------GYLVDDVAKDIDAGCKPYXA 204
Query: 202 PELL---LCCDNYGTSIDVWSVGCIFAEL-LGRKPIFPGTECLNQLKLIINILGSRREED 257
PE + L Y D+WS+G EL + R P QLK
Sbjct: 205 PERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLK------------- 251
Query: 258 LEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHP 317
+ ++ P P P FS + +D + L + +R + E QHP
Sbjct: 252 -QVVEEPS--------PQLPADKFSAEF-------VDFTSQCLKKNSKERPTYPELXQHP 295
Query: 318 YMS 320
+ +
Sbjct: 296 FFT 298
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 103
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 160
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 218
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 219 -SLTESKFSVASDVWSFGVVLYELF 242
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 18 YYSMWQTLFEI-DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVD 72
+ + Q + E+ D + I +G G G+V ++ + +A K +I A N++
Sbjct: 55 FLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI- 113
Query: 73 ALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALT 131
+REL++L ++ ++ + E MD L Q++K + +
Sbjct: 114 ----IRELQVLHECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKKAGRIP 164
Query: 132 NDHCQYFLFQLLRGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
+++GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + +
Sbjct: 165 EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMA 222
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL-LGRKPIFP 235
+V TR Y +PE L +Y D+WS+G E+ +GR PI P
Sbjct: 223 NSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPP 267
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y +M+ ++ ++ + H +++ Q++ +
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 19/206 (9%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVI-- 92
I+ +G G++G V ++ET A+K ++ + + +LK + H +E I
Sbjct: 47 IRTLGTGSFGRVMLVKHKETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRIQQ 97
Query: 93 ALKDVMMPSHRRNFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
A+ + +FKD +Y+V E ++ ++ + H +++ Q++ +Y
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCC 208
LHS ++++RDLKP NLL++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG---TPEYLAPEIIL-S 213
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 63/337 (18%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK--------------------KINNAFE 68
D +Y+ ++ +G G + V + + N VA+K ++N+A
Sbjct: 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADN 77
Query: 69 NRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIK--S 126
+ D++ LKLL H H+ N V +V+E++ +L +IK
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGP-------------NGVHVVMVFEVLGENLLALIKKYE 124
Query: 127 SQALTNDHCQYFLFQLLRGLKYLHS-ANILHRDLKPGNLLVNAN------CDLKICDFGL 179
+ + + + QLL GL Y+H I+H D+KP N+L+ +KI D G
Sbjct: 125 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG- 183
Query: 180 ARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTEC 239
+ ++ T + TR YR+PE+LL +G D+WS C+ EL+ +F E
Sbjct: 184 --NACWYDEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEG 240
Query: 240 L------NQLKLIINILGS-------RREEDLEFIDNPKARKYIKSLPYTPG----TPFS 282
+ + II +LG + F ++ + I L + P T
Sbjct: 241 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY 300
Query: 283 RLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ D D L ML DP KR + HP++
Sbjct: 301 KFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 45/288 (15%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR-ELKLLRHLQHENVIAL 94
+P+G+G +G V + R++ +A+K + + LR E+++ HL+H N++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 95 KDVMMPSHRRNFKDVYLVYEL--MDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R VYL+ E + T ++ K S+ ++ +L L Y HS
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSR-FDEQRTATYITELANALSYCHSK 131
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ +N +LKI DFG + + + T Y PE ++ +
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPE-MIEGRMHD 188
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+WS+G + E L P F +A Y ++
Sbjct: 189 EKVDLWSLGVLCYEFLVGMPPF------------------------------EAHTYQET 218
Query: 273 LPYTPGTPFSRLYPD-AHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
F+ +PD A DL+ ++L + ++R+++ E L+HP++
Sbjct: 219 YRRISRVEFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWI 264
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 136/337 (40%), Gaps = 63/337 (18%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK--------------------KINNAFE 68
D +Y+ ++ +G G + V + + N VA+K ++N+A
Sbjct: 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADN 77
Query: 69 NRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIK--S 126
+ D++ LKLL H H+ + VM V+E++ +L +IK
Sbjct: 78 TKEDSMGANHILKLLDHFNHKGPNGVHVVM-------------VFEVLGENLLALIKKYE 124
Query: 127 SQALTNDHCQYFLFQLLRGLKYLHS-ANILHRDLKPGNLLVNAN------CDLKICDFGL 179
+ + + + QLL GL Y+H I+H D+KP N+L+ +KI D G
Sbjct: 125 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG- 183
Query: 180 ARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTEC 239
+ ++ T + TR YR+PE+LL +G D+WS C+ EL+ +F E
Sbjct: 184 --NACWYDEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEG 240
Query: 240 L------NQLKLIINILGS-------RREEDLEFIDNPKARKYIKSLPYTPG----TPFS 282
+ + II +LG + F ++ + I L + P T
Sbjct: 241 HSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKY 300
Query: 283 RLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
+ D D L ML DP KR + HP++
Sbjct: 301 KFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 75
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 132
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 190
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 191 -SLTESKFSVASDVWSFGVVLYELF 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 70
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 127
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 185
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 186 -SLTESKFSVASDVWSFGVVLYELF 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 76
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 133
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 191
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 192 -SLTESKFSVASDVWSFGVVLYELF 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 77
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 134
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 192
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 193 -SLTESKFSVASDVWSFGVVLYELF 216
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 78
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 135
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 193
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 194 -SLTESKFSVASDVWSFGVVLYELF 217
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 10/223 (4%)
Query: 30 TKYVPIKPIGRGAYG---IVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL 86
+++ +K +G+G++G +V + + A+K + A D +RT E +L +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
H ++ L + +YL+ + + DL + T + +++L +L
Sbjct: 85 NHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 139
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
L +LHS I++RDLKP N+L++ +K+ DFGL++ S + + T Y APE +
Sbjct: 140 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-V 198
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
+ + S D WS G + E+L F G + + +I+
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 241
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 105/223 (47%), Gaps = 10/223 (4%)
Query: 30 TKYVPIKPIGRGAYG---IVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL 86
+++ +K +G+G++G +V + + A+K + A D +RT E +L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
H ++ L + +YL+ + + DL + T + +++L +L
Sbjct: 84 NHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
L +LHS I++RDLKP N+L++ +K+ DFGL++ S + + T Y APE +
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-V 197
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
+ + S D WS G + E+L F G + + +I+
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK 240
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y +M+ ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 79
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 136
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 194
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 195 -SLTESKFSVASDVWSFGVVLYELF 218
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 71
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 128
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 186
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 187 -SLTESKFSVASDVWSFGVVLYELF 210
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 72
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 129
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 187
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 188 -SLTESKFSVASDVWSFGVVLYELF 211
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 24/200 (12%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R + EL L ++ L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFR-VEELVACAGLSSPRIVPLYGA 134
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ R V + EL++ L Q+IK L D Y+L Q L GL+YLH+ ILH
Sbjct: 135 V-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSNGKNQFMTEYV-VTRWYRAPELLLC--C 208
D+K N+L++++ +CDFG L GK+ +Y+ T + APE+++ C
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 209 DNYGTSIDVWSVGCIFAELL 228
D +D+WS C+ +L
Sbjct: 250 D---AKVDIWSSCCMMLHML 266
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 72
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 129
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 187
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 188 -SLTESKFSVASDVWSFGVVLYELF 211
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 82
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 83 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 142
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 143 YLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 198
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 90
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 147
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 205
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 206 -SLTESKFSVASDVWSFGVVLYELF 229
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 21/206 (10%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 75
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTNDHCQYFLF--QLLRGLK 147
++ K V + RRN K L+ E + L + ++ + DH + + Q+ +G++
Sbjct: 76 IVKYKGVCYSAGRRNLK---LIMEFLPYGSLREYLQKHKERI-DHIKLLQYTSQICKGME 131
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAP 202
YL + +HRDL N+LV +KI DFGL + K + E + WY AP
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-AP 189
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAELL 228
E L + + DVWS G + EL
Sbjct: 190 E-SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
++ +G+G +G V C + T E VA+KK+ ++ E + RE+++L+ LQH+N
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 90
Query: 91 VIALKDVMMPSHRRNFKDV--YLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
++ K V + RRN K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 147
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-----SNGKNQFMTEYVVTRWYRAPE 203
L + +HRDL N+LV +KI DFGL + K + E + WY APE
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF-WY-APE 205
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L + + DVWS G + EL
Sbjct: 206 -SLTESKFSVASDVWSFGVVLYELF 229
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 24/200 (12%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R + EL L ++ L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFR-VEELVACAGLSSPRIVPLYGA 118
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ R V + EL++ L Q+IK L D Y+L Q L GL+YLH+ ILH
Sbjct: 119 V-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSNGKNQFMTEYV-VTRWYRAPELLLC--C 208
D+K N+L++++ +CDFG L GK+ +Y+ T + APE+++ C
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
Query: 209 DNYGTSIDVWSVGCIFAELL 228
D +D+WS C+ +L
Sbjct: 234 D---AKVDIWSSCCMMLHML 250
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 21/221 (9%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ +G G++G V +R A+K + R LK + H E ++ L
Sbjct: 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR---------LKQVEHTNDERLM-L 60
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
V P R F+D ++ +MD +L +++ SQ N +++ ++ L+
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS +I++RDLKP N+L++ N +KI DFG A+ + T Y APE ++
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCG---TPDYIAPE-VVS 176
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIIN 248
Y SID WS G + E+L F + + + I+N
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 217
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVDALRTLRELKLLR 84
D + I +G G G+V ++ + +A K +I A N++ +REL++L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
++ ++ + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEL-LGRKPIFP 235
E L +Y D+WS+G E+ +GR PI P
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y +M+ ++ ++ H +++ Q++ +
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 32 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 81
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 82 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 141
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 142 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG---TPEYLAPEIIL- 197
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 198 SKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKEIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y +M+ ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +++ DFGLA+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVDALRTLRELKLLR 84
D + I +G G G+V ++ + +A K +I A N++ +REL++L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
++ ++ + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEL-LGRKPIFP 235
E L +Y D+WS+G E+ +GR PI P
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVDALRTLRELKLLR 84
D + I +G G G+V ++ + +A K +I A N++ +REL++L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
++ ++ + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEL-LGRKPIFP 235
E L +Y D+WS+G E+ +GR PI P
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 18 YYSMWQTLFEI-DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVD 72
+ + Q + E+ D + I +G G G+V ++ + +A K +I A N++
Sbjct: 20 FLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI- 78
Query: 73 ALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALT 131
+REL++L ++ ++ + E MD L Q++K + +
Sbjct: 79 ----IRELQVLHECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKKAGRIP 129
Query: 132 NDHCQYFLFQLLRGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
+++GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + +
Sbjct: 130 EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMA 187
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL-LGRKPIFP 235
+V TR Y +PE L +Y D+WS+G E+ +GR PI P
Sbjct: 188 NSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPP 232
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 116
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 176
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 232
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G +G V ++++T E+VAIK+ + + R E+++++ L H NV++ ++V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK-NRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 98 MMPSHRRNFKDV-YLVYELMDT-DLHQIIKSSQ---ALTNDHCQYFLFQLLRGLKYLHSA 152
+ D+ L E + DL + + + L + L + L+YLH
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 153 NILHRDLKPGNLLVNANCDL---KICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLKP N+++ KI D G A+ + + + TE+V T Y APELL
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELLE-QK 199
Query: 210 NYGTSIDVWSVGCI-FAELLGRKPIFP 235
Y ++D WS G + F + G +P P
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G +G V ++++T E+VAIK+ + + R E+++++ L H NV++ ++V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK-NRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 98 MMPSHRRNFKDV-YLVYELMDT-DLHQIIKSSQ---ALTNDHCQYFLFQLLRGLKYLHSA 152
+ D+ L E + DL + + + L + L + L+YLH
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 153 NILHRDLKPGNLLVNANCDL---KICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLKP N+++ KI D G A+ + + + TE+V T Y APELL
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPELLE-QK 198
Query: 210 NYGTSIDVWSVGCI-FAELLGRKPIFP 235
Y ++D WS G + F + G +P P
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%), Gaps = 43/289 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIA 93
++P+G+G +G V + ++ +A+K + + E + RE+++ HL+H N++
Sbjct: 19 VRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 94 LKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ + H R K +YL+ E +L++ ++ F+ +L L Y H
Sbjct: 79 MYNYF---HDR--KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLA-RTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ +LKI DFG + + + + M T Y PE ++ +
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYLPPE-MIEGKTH 189
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIK 271
+D+W G + E L P F + I+N+ DL+F
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-------DLKF----------- 231
Query: 272 SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
PF D + DL+ K+L + P +R+ + ++HP++
Sbjct: 232 -------PPF---LSDG---SKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVDALRTLRELKLLR 84
D + I +G G G+V ++ + +A K +I A N++ +REL++L
Sbjct: 8 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 62
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
++ ++ + E MD L Q++K + + ++
Sbjct: 63 ECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 117
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + ++ E+V TR Y +P
Sbjct: 118 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDEMANEFVGTRSYMSP 175
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEL-LGRKP 232
E L +Y D+WS+G E+ +GR P
Sbjct: 176 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 137/333 (41%), Gaps = 66/333 (19%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKL-LRHL 86
ID V + +G G G V N+ T EK A+K + D + RE++L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 68
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLL 143
Q +++ + DV + K + +V E +D +L I + QA T + +
Sbjct: 69 QCPHIVRIVDVYENLYA-GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + G
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG--------------- 172
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
+ Y S D+WS+G I LL P F L
Sbjct: 173 --------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-------------------- 204
Query: 261 IDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPY- 318
+P + I+ Y P +S + + L +LL+ +PT+R+++TE + HP+
Sbjct: 205 AISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKT----EPTQRMTITEFMNHPWI 260
Query: 319 MSPLYDPSSNPPAQVPIDLDMDEESGEEMIREM 351
M P + P L D+E E++ EM
Sbjct: 261 MQSTKVPQT--PLHTSRVLKEDKERWEDVKEEM 291
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y +M+ ++ ++ H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +K+ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 90
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 91 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 150
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 151 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 206
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 24/200 (12%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R + EL L ++ L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFR-VEELVACAGLSSPRIVPLYGA 132
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILH 156
+ R V + EL++ L Q+IK L D Y+L Q L GL+YLH+ ILH
Sbjct: 133 V-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSNGKNQFMTEYV-VTRWYRAPELLLC--C 208
D+K N+L++++ +CDFG L GK+ +Y+ T + APE+++ C
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 209 DNYGTSIDVWSVGCIFAELL 228
D +D+WS C+ +L
Sbjct: 248 D---AKVDIWSSCCMMLHML 264
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVDALRTLRELKLLR 84
D + I +G G G+V ++ + +A K +I A N++ +REL++L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
++ ++ + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEL-LGRKPIFP 235
E L +Y D+WS+G E+ +GR PI P
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIK----KINNAFENRVDALRTLRELKLLR 84
D + I +G G G+V ++ + +A K +I A N++ +REL++L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLL 143
++ ++ + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSD-----GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEL-LGRKPIFP 235
E L +Y D+WS+G E+ +GR PI P
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPP 205
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 96
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 156
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 116
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 176
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G + T Y APE++L
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCG---TPEYLAPEIIL- 232
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + ++ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V + ET A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y +M+ ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +++ DFG A+ G+ + T Y APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 49/262 (18%)
Query: 25 LFEIDTKYVPIKPIGRGAYGIV---CSSVNRETNEKVAIKKINNAFENRVDALRTLRELK 81
+F+I+ K IG G + V + + EK+A+K + + T ++
Sbjct: 22 VFKIEDK------IGEGTFSSVYLATAQLQVGPEEKIALKHL----------IPTSHPIR 65
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
+ LQ V +D +M K+ ++V + + + +L+ + ++
Sbjct: 66 IAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLN 125
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSN---------------- 184
L + LK +H I+HRD+KP N L N + DFGLA+ ++
Sbjct: 126 LFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQ 185
Query: 185 ------------GKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL-GRK 231
+ Q + T +RAPE+L C N T+ID+WS G IF LL GR
Sbjct: 186 ERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245
Query: 232 PIFPGTECLNQLKLIINILGSR 253
P + ++ L L I+ I GSR
Sbjct: 246 PFYKASDDLTALAQIMTIRGSR 267
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NL+++ +++ DFG A+ G+ + T Y APE+++
Sbjct: 156 YLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIII- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 43/288 (14%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+P+G+G +G V + ++ +A+K + + E + RE+++ HL+H N++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ H R K +YL+ E +L++ ++ F+ +L L Y H
Sbjct: 80 YNYF---HDR--KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLA-RTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ +LKI DFG + + + + M T Y PE ++ +
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYLPPE-MIEGKTHD 190
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+W G + E L P F + I+N+ DL+F
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-------DLKF------------ 231
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
PF D + DL+ K+L + P +R+ + ++HP++
Sbjct: 232 ------PPF---LSDG---SKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 127/288 (44%), Gaps = 43/288 (14%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+P+G+G +G V + ++ +A+K + + E + RE+++ HL+H N++ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ H R K +YL+ E +L++ ++ F+ +L L Y H
Sbjct: 81 YNYF---HDR--KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLA-RTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ +LKI DFG + + + + M T Y PE ++ +
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCG---TLDYLPPE-MIEGKTHD 191
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
+D+W G + E L P F + I+N+ DL+F
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-------DLKF------------ 232
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
PF D + DL+ K+L + P +R+ + ++HP++
Sbjct: 233 ------PPF---LSDG---SKDLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 135/293 (46%), Gaps = 47/293 (16%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE---NVIAL 94
+G G G V +R T +K A+K + ++ + R + + H Q +++ +
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQE---------VDHHWQASGGPHIVCI 87
Query: 95 KDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLLRGLKYLHS 151
DV H + + ++ E M+ +L I + QA T + + +++LHS
Sbjct: 88 LDVYENMHHGK-RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 152 ANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCC 208
NI HRD+KP NLL + + LK+ DFG A+ + +N T T +Y APE +L
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTP-CYTPYYVAPE-VLGP 203
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ Y S D+WS+G I LL P F N + I +P ++
Sbjct: 204 EKYDKSCDMWSLGVIMYILLCGFPPFYS----NTGQAI----------------SPGMKR 243
Query: 269 YIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
I+ Y P +S + DA L++ +L DPT+R+++T+ + HP+++
Sbjct: 244 RIRLGQYGFPNPEWSEVSEDAK----QLIRLLLKTDPTERLTITQFMNHPWIN 292
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T Y AP ++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPAIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 148/325 (45%), Gaps = 50/325 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE---NVIAL 94
+G G G V +R T +K A+K + ++ + R + + H Q +++ +
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQE---------VDHHWQASGGPHIVCI 68
Query: 95 KDVMMPSHRRNFKDVYLVYELMDT-DLHQII--KSSQALTNDHCQYFLFQLLRGLKYLHS 151
DV H + + ++ E M+ +L I + QA T + + +++LHS
Sbjct: 69 LDVYENMHHGK-RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 127
Query: 152 ANILHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCC 208
NI HRD+KP NLL + + LK+ DFG A+ + +N T T +Y APE +L
Sbjct: 128 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTP-CYTPYYVAPE-VLGP 184
Query: 209 DNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARK 268
+ Y S D+WS+G I LL P F N + I +P ++
Sbjct: 185 EKYDKSCDMWSLGVIMYILLCGFPPFYS----NTGQAI----------------SPGMKR 224
Query: 269 YIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS-PLYDPS 326
I+ Y P +S + DA L++ +L DPT+R+++T+ + HP+++ + P
Sbjct: 225 RIRLGQYGFPNPEWSEVSEDAK----QLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQ 280
Query: 327 SNPPAQVPIDLDMDEESGEEMIREM 351
+ P L D++ +E+ EM
Sbjct: 281 T--PLHTARVLQEDKDHWDEVKEEM 303
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 34/228 (14%)
Query: 27 EIDTKYVPIKP-IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKL 82
EID YV I+ IG G +G VC + +K VAIK + + R L E +
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLSEASI 70
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQALTNDHCQYFLFQ 141
+ +H N+I L+ V+ N V ++ E M+ L ++ ND Q+ + Q
Sbjct: 71 MGQFEHPNIIRLEGVVT-----NSMPVMILTEFMENGALDSFLR-----LNDG-QFTVIQ 119
Query: 142 LL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
L+ G++YL + +HRDL N+LVN+N K+ DFGL+R + TE
Sbjct: 120 LVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETS 179
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
+ RW APE + + ++ D WS G + E++ G +P +
Sbjct: 180 SLGGKIPIRWT-APE-AIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 225
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 146/344 (42%), Gaps = 57/344 (16%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELK 81
W+ ++ ++ I+ +G G +G V + + + A+K + N + A E
Sbjct: 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI---EAD 83
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQ--ALTNDHCQYFL 139
+L+ +Q++++ V + + L++E + L++II + + + +
Sbjct: 84 ILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYC 143
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVN-------------------------ANCDLKI 174
++L+ L YL ++ H DLKP N+L++ + +K+
Sbjct: 144 IEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKL 203
Query: 175 CDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIF 234
DFG A K+ + + TR YRAPE++L + S D+WS GC+ AEL +F
Sbjct: 204 IDFGCA---TFKSDYHGSIINTRQYRAPEVILNL-GWDVSSDMWSFGCVLAELYTGSLLF 259
Query: 235 PGTECLNQLKLIINIL---------------GSRR----EEDLEFIDNPKARKYIKSLPY 275
E + L ++ +I+ GS+ E L + +N + IK +
Sbjct: 260 RTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVK- 318
Query: 276 TPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
P ++ H L D L +L DPT R S E L+H ++
Sbjct: 319 -KCLPLYKII--KHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 106/228 (46%), Gaps = 34/228 (14%)
Query: 27 EIDTKYVPIKP-IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKL 82
EID YV I+ IG G +G VC + +K VAIK + + R L E +
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLSEASI 68
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQALTNDHCQYFLFQ 141
+ +H N+I L+ V+ N V ++ E M+ L ++ ND Q+ + Q
Sbjct: 69 MGQFEHPNIIRLEGVVT-----NSMPVMILTEFMENGALDSFLR-----LNDG-QFTVIQ 117
Query: 142 LL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTE 192
L+ G++YL + +HRDL N+LVN+N K+ DFGL+R N + T
Sbjct: 118 LVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTS 177
Query: 193 Y----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
+ RW APE + + ++ D WS G + E++ G +P +
Sbjct: 178 SLGGKIPIRW-TAPE-AIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 223
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 107/223 (47%), Gaps = 27/223 (12%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL-RTLRELKLLRHLQH 88
T + PI+ +GRG +G+V + N+ + AIK+I NR A + +RE+K L L+H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAKLEH 62
Query: 89 ENVIALKDVMMPSH-----RRNFKDVYLVYELM---DTDLHQIIKSSQALTNDH---CQY 137
++ + + + + + VYL ++ +L + + C +
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL--ARTSNGKNQFM----- 190
Q+ +++LHS ++HRDLKP N+ + +K+ DFGL A + + Q +
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 191 -----TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
T V T+ Y +PE + ++Y +D++S+G I ELL
Sbjct: 183 AYARHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 105/207 (50%), Gaps = 21/207 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G++G V ++E+ A+K ++ + + +LK + H +E I L
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDK---------QKVVKLKQIEHTLNEKRI-L 95
Query: 95 KDVMMPSHRR---NFKD---VYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ V P + +FKD +Y+V E + ++ ++ + H +++ Q++ +
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE 155
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS ++++RDLKP NLL++ +++ DFG A+ G+ + T APE++L
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEALAPEIIL- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W++G + E+ P F
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 129/303 (42%), Gaps = 45/303 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQ-HENVIALK 95
+G GAY V +V+ + ++ A+K I A +R R RE++ L Q ++N++ L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS---RVFREVETLYQCQGNKNILELI 77
Query: 96 DVMMPSHRRNFKDVYLVYE-LMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ R YLV+E L + I+ + + + L +LH+ I
Sbjct: 78 EFFEDDTR-----FYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGI 132
Query: 155 LHRDLKPGNLLVNA---NCDLKICDFGLARTSNGKNQF-------MTEYVVTRWYRAPEL 204
HRDLKP N+L + +KICDF L N +T + Y APE+
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 205 LLCCDN----YGTSIDVWSVGCIFAELLGRKPIFPG---TECLNQLKLIINILGSRREED 257
+ + Y D+WS+G + +L P F G +C G R E
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADC-----------GWDRGEV 241
Query: 258 LEFIDNPKARKYIKSLPYT-PGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
N K + I+ Y P ++ + +A DL+ K+LV D +R+S + LQH
Sbjct: 242 CRVCQN-KLFESIQEGKYEFPDKDWAHISSEAK----DLISKLLVRDAKQRLSAAQVLQH 296
Query: 317 PYM 319
P++
Sbjct: 297 PWV 299
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+K IG+G++G V + ++ A+K + + + + K +H+ E + L
Sbjct: 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQK---------KAILKKKEEKHIMSERNVLL 93
Query: 95 KDVMMP---SHRRNFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
K+V P +F+ +Y ++D +L ++ + +++ ++ L
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLC 207
YLHS NI++RDLKP N+L+++ + + DFGL + + N + + T Y APE +L
Sbjct: 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE-VLH 212
Query: 208 CDNYGTSIDVWSVGCIFAELLGRKPIF 234
Y ++D W +G + E+L P F
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 74 LRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTN 132
LR RE + L H ++A+ D + Y+V E +D L I+ + +T
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGE-AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 133 DHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFM 190
+ + L + H I+HRD+KP N+L++A +K+ DFG+AR +G +
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 191 TEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPG 236
T V+ T Y +PE D+ DV+S+GC+ E+L +P F G
Sbjct: 176 TAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 49/295 (16%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVA---IKKINNAFENRVDALRTLRELKLLRHLQHENVI 92
K +GRG + +V +++ T ++ A +KK + R + L + L+L + VI
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR--VI 92
Query: 93 ALKDVMMPSHRRNFKDVYLVYELM-DTDLHQII--KSSQALTNDHCQYFLFQLLRGLKYL 149
L +V N ++ L+ E ++ + + ++ ++ + + Q+L G+ YL
Sbjct: 93 NLHEVY-----ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYL 147
Query: 150 HSANILHRDLKPGNLLVNAN---CDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLL 206
H NI+H DLKP N+L+++ D+KI DFG++R G + E + T Y APE +L
Sbjct: 148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI-GHACELREIMGTPEYLAPE-IL 205
Query: 207 CCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKA 266
D T+ D+W++G I LL F G DN +
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLTHTSPFVGE------------------------DNQET 241
Query: 267 RKYIK--SLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
I ++ Y+ T + LA D +Q +LV +P KR + L H ++
Sbjct: 242 YLNISQVNVDYSEET-----FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK IGRGA+G +VA+ K+ N R+ A++ L + ++L+ +
Sbjct: 79 IKVIGRGAFG------------EVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREE 124
Query: 95 KDVM-------MPSHRRNFKDVYLVYELMD----TDLHQII-KSSQALTNDHCQYFLFQL 142
+DV+ + + F+D +Y +MD DL ++ K L D ++++ ++
Sbjct: 125 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 184
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-TRWYRA 201
+ + +H + +HRD+KP N+L++ N +++ DFG N + V T Y +
Sbjct: 185 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 244
Query: 202 PELLLCCDN----YGTSIDVWSVG-CIFAELLGRKPIF 234
PE+L ++ YG D WS+G C++ L G P +
Sbjct: 245 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 12 RSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENR- 70
R GK S+ F++ ++ IGRG+Y V ++T+ A+K + N
Sbjct: 8 RESGKASSSLGLQDFDL------LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDD 61
Query: 71 --VDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSS 127
+D ++T + + + H ++ L R ++ V E ++ DL ++
Sbjct: 62 EDIDWVQTEKHV-FEQASNHPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQ 115
Query: 128 QALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKN 187
+ L +H +++ ++ L YLH I++RDLK N+L+++ +K+ D+G+ +
Sbjct: 116 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 175
Query: 188 QFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL-GRKPI 233
+ + T Y APE+L D YG S+D W++G + E++ GR P
Sbjct: 176 DTTSXFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENR---VDALRTLRELKLLRHLQHENV 91
++ IGRG+Y V ++T+ A+K + N +D ++T + + + H +
Sbjct: 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV-FEQASNHPFL 72
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L R ++ V E ++ DL ++ + L +H +++ ++ L YLH
Sbjct: 73 VGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I++RDLK N+L+++ +K+ D+G+ + + + T Y APE+L D
Sbjct: 128 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED- 186
Query: 211 YGTSIDVWSVGCIFAELL-GRKPI 233
YG S+D W++G + E++ GR P
Sbjct: 187 YGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 44/223 (19%)
Query: 36 KPIGRGAYGIVCSSVNRETNEK----VAIKKINNAF--ENRVDALRTLRELKLLRHLQHE 89
K IG G +G V + + ++ K VAIK + + + RVD L E ++ H
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD---FLGEAGIMGQFSHH 106
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQALTNDHCQYFLFQLLRG--- 145
N+I L+ V+ +K + ++ E M+ L + ++ + L +LRG
Sbjct: 107 NIIRLEGVI-----SKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAA 158
Query: 146 -LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-----------TSNGKNQFMTEY 193
+KYL + N +HRDL N+LVN+N K+ DFGL+R TS GK
Sbjct: 159 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK------- 211
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
+ RW APE + + ++ DVWS G + E++ G +P +
Sbjct: 212 IPIRW-TAPE-AISYRKFTSASDVWSFGIVMWEVMTYGERPYW 252
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 101/204 (49%), Gaps = 12/204 (5%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENR---VDALRTLRELKLLRHLQHENV 91
++ IGRG+Y V ++T+ A+K + N +D ++T + + + H +
Sbjct: 10 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHV-FEQASNHPFL 68
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH 150
+ L R ++ V E ++ DL ++ + L +H +++ ++ L YLH
Sbjct: 69 VGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
I++RDLK N+L+++ +K+ D+G+ + + + T Y APE+L D
Sbjct: 124 ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED- 182
Query: 211 YGTSIDVWSVGCIFAELL-GRKPI 233
YG S+D W++G + E++ GR P
Sbjct: 183 YGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK IGRGA+G +VA+ K+ N R+ A++ L + ++L+ +
Sbjct: 95 IKVIGRGAFG------------EVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREE 140
Query: 95 KDVM-------MPSHRRNFKDVYLVYELMD----TDLHQII-KSSQALTNDHCQYFLFQL 142
+DV+ + + F+D +Y +MD DL ++ K L D ++++ ++
Sbjct: 141 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 200
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-TRWYRA 201
+ + +H + +HRD+KP N+L++ N +++ DFG N + V T Y +
Sbjct: 201 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYIS 260
Query: 202 PELLLCCDN----YGTSIDVWSVG-CIFAELLGRKPIF 234
PE+L ++ YG D WS+G C++ L G P +
Sbjct: 261 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 298
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 19/207 (9%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+ + IG+G++G V ++ T E VAIK I+ L E + + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIID------------LEEAEDEIEDIQQEI 68
Query: 92 IALKDVMMPSHRRNFKD------VYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRG 145
L P R F ++++ E + + L + L ++L+G
Sbjct: 69 TVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKG 128
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
L YLHS +HRD+K N+L++ D+K+ DFG+A +V T ++ APE++
Sbjct: 129 LDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 188
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKP 232
Y D+WS+G EL +P
Sbjct: 189 KQS-AYDFKADIWSLGITAIELAKGEP 214
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 128/311 (41%), Gaps = 61/311 (19%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRT--LRELKLLRHLQ-HENVIAL 94
+G GA+ V + +N T+++ A+K I E + +R+ RE+++L Q H NV+ L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKII----EKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ R YLV+E M + I + + + L +LH+
Sbjct: 77 IEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG 131
Query: 154 ILHRDLKPGNLLV---NANCDLKICDFGLAR-----------------TSNGKNQFMTEY 193
I HRDLKP N+L N +KICDFGL T G ++M
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSR 253
VV + + Y D+WS+G I LL P F G R
Sbjct: 192 VVEAFSEEASI------YDKRCDLWSLGVILYILLSGYPPFVG----------------R 229
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPD---AH--PLAIDLLQKMLVFDPTKRI 308
D + D +A +++ + +PD AH A DL+ K+LV D +R+
Sbjct: 230 CGSDCGW-DRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL 288
Query: 309 SVTEALQHPYM 319
S + LQHP++
Sbjct: 289 SAAQVLQHPWV 299
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 32/230 (13%)
Query: 27 EIDTKYVPIKP-IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKL 82
EID V I+ IG G +G VCS + ++ VAIK + + + + L E +
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASI 87
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ H NVI L+ V+ S V ++ E M+ L + Q+ + QL
Sbjct: 88 MGQFDHPNVIHLEGVVTKS-----TPVMIITEFMENG-----SLDSFLRQNDGQFTVIQL 137
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-----TSNGK-NQF 189
+ G+KYL N +HRDL N+LVN+N K+ DFGL+R TS+
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGT 237
+ + RW APE + + ++ DVWS G + E++ G +P + T
Sbjct: 198 LGGKIPIRW-TAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 245
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 109/227 (48%), Gaps = 18/227 (7%)
Query: 12 RSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENR- 70
R GK S+ F++ ++ IGRG+Y V ++T+ A++ + N
Sbjct: 40 RESGKASSSLGLQDFDL------LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD 93
Query: 71 --VDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSS 127
+D ++T + + + H ++ L R ++ V E ++ DL ++
Sbjct: 94 EDIDWVQTEKHV-FEQASNHPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQ 147
Query: 128 QALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKN 187
+ L +H +++ ++ L YLH I++RDLK N+L+++ +K+ D+G+ +
Sbjct: 148 RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207
Query: 188 QFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL-GRKPI 233
+ + T Y APE+L D YG S+D W++G + E++ GR P
Sbjct: 208 DTTSTFCGTPNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 12/225 (5%)
Query: 8 PNGIRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAF 67
P ++ PG M + + + + ++ IG+G++G V ++ T + VAIK I+
Sbjct: 6 PVAVQVPG-----MQNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIID-LE 59
Query: 68 ENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS 127
E + +E+ +L V + + ++++ E + + +
Sbjct: 60 EAEDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSK-----LWIIMEYLGGGSALDLLRA 114
Query: 128 QALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKN 187
L ++L+GL YLHS +HRD+K N+L++ D+K+ DFG+A
Sbjct: 115 GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 174
Query: 188 QFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKP 232
+V T ++ APE++ Y + D+WS+G EL +P
Sbjct: 175 IKRNTFVGTPFWMAPEVIQQS-AYDSKADIWSLGITAIELAKGEP 218
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGLAR + + +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 28/212 (13%)
Query: 36 KPIGRGAYGIVC-SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
K +G G +G V ++ N+ T KVA+K + V+A L E +++ LQH+ ++ L
Sbjct: 21 KKLGAGQFGEVWMATYNKHT--KVAVKTMKPG-SMSVEAF--LAEANVMKTLQHDKLVKL 75
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLF--QLLRGLKYLHS 151
V+ + +Y++ E M L +KS + + F Q+ G+ ++
Sbjct: 76 HAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+A+ KI DFGLAR E +W APE +
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPEAI---- 184
Query: 210 NYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
N+G+ DVWS G + E++ GR P +PG
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRIP-YPG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 74 LRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTN 132
LR RE + L H ++A+ D + Y+V E +D L I+ + +T
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGE-AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 133 DHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFM 190
+ + L + H I+HRD+KP N++++A +K+ DFG+AR +G +
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 191 TEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPG 236
T V+ T Y +PE D+ DV+S+GC+ E+L +P F G
Sbjct: 176 TAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 104/210 (49%), Gaps = 34/210 (16%)
Query: 36 KPIGRGAYGIVC-SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
K +G G +G V ++ N+ T KVA+K + V+A L E +++ LQH+ ++ L
Sbjct: 188 KKLGAGQFGEVWMATYNKHT--KVAVKTMKPG-SMSVEAF--LAEANVMKTLQHDKLVKL 242
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLF--QLLRGLKYLHS 151
V+ + +Y++ E M L +KS + + F Q+ G+ ++
Sbjct: 243 HAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL+ N+LV+A+ KI DFGLAR +F ++ APE + N+
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLARVG---AKFPIKWT------APEAI----NF 343
Query: 212 GT---SIDVWSVGCIFAELL--GRKPIFPG 236
G+ DVWS G + E++ GR P +PG
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIP-YPG 372
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALR-TLRELKLLRHLQHENVIALKD 96
+G+G++G V + + T E AIK + + D + T+ E ++L L +
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLT--- 83
Query: 97 VMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANIL 155
+ S + +Y V E ++ DL I+ ++ ++ GL +LH I+
Sbjct: 84 -QLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGII 142
Query: 156 HRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSI 215
+RDLK N+++++ +KI DFG+ + E+ T Y APE ++ YG S+
Sbjct: 143 YRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPE-IIAYQPYGKSV 201
Query: 216 DVWSVGCIFAELLGRKPIFPGTE 238
D W+ G + E+L +P F G +
Sbjct: 202 DWWAYGVLLYEMLAGQPPFDGED 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 74 LRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTN 132
LR RE + L H ++A+ D + Y+V E +D L I+ + +T
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGE-AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 133 DHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFM 190
+ + L + H I+HRD+KP N++++A +K+ DFG+AR +G +
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 191 TEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPG 236
T V+ T Y +PE D+ DV+S+GC+ E+L +P F G
Sbjct: 176 TAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 74 LRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTN 132
LR RE + L H ++A+ D + Y+V E +D L I+ + +T
Sbjct: 57 LRFRREAQNAAALNHPAIVAVYDTGE-AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 133 DHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFM 190
+ + L + H I+HRD+KP N++++A +K+ DFG+AR +G +
Sbjct: 116 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 191 TEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPG 236
T V+ T Y +PE D+ DV+S+GC+ E+L +P F G
Sbjct: 176 TAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 103/212 (48%), Gaps = 28/212 (13%)
Query: 36 KPIGRGAYGIVC-SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
K +G G +G V ++ N+ T KVA+K + V+A L E +++ LQH+ ++ L
Sbjct: 194 KKLGAGQFGEVWMATYNKHT--KVAVKTMKPG-SMSVEAF--LAEANVMKTLQHDKLVKL 248
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLF--QLLRGLKYLHS 151
V+ + +Y++ E M L +KS + + F Q+ G+ ++
Sbjct: 249 HAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+A+ KI DFGLAR E +W APE +
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPEAI---- 357
Query: 210 NYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
N+G+ DVWS G + E++ GR P +PG
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIP-YPG 388
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 42/234 (17%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 90
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y++ DL++ L
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFL 145
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR ++
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 206 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 42/234 (17%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 81
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y++ DL++ L
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFL 136
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR ++
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 197 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 246
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 42/234 (17%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 81
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y++ DL++ L
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFL 136
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR ++
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 197 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 246
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 42/234 (17%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 127
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y++ DL++ L
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFL 182
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR ++
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 243 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 292
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E M+ DL I AL + + F
Sbjct: 66 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 178
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEXMENGSLDSFLRKHDA------QFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 95
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 144
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 145 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 205 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 250
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEXMENGSLDSFLRKHDA------QFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 10 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 65
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K+ LT +
Sbjct: 66 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR E
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
+W APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 180 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 219
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 110 YLVYELMD-TDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNA 168
Y+V E +D L I+ + +T + + L + H I+HRD+KP N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 169 NCDLKICDFGLAR--TSNGKNQFMTEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFA 225
+K+ DFG+AR +G + T V+ T Y +PE D+ DV+S+GC+
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLY 210
Query: 226 ELLGRKPIFPG 236
E+L +P F G
Sbjct: 211 EVLTGEPPFTG 221
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 74 LRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTN 132
LR RE + L H ++A+ D + Y+V E +D L I+ + +T
Sbjct: 74 LRFRREAQNAAALNHPAIVAVYDTG-EAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 132
Query: 133 DHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFM 190
+ + L + H I+HRD+KP N++++A +K+ DFG+AR +G +
Sbjct: 133 KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 191 TEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPG 236
T V+ T Y +PE D+ DV+S+GC+ E+L +P F G
Sbjct: 193 TAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
I+ +G G +G V C T E+VA+K + + N + L+ +E+++LR+L HE
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK--KEIEILRNLYHE 83
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQY-FLFQLLRGLK 147
N++ K + K L+ E + + L + + ++ N Q + Q+ +G+
Sbjct: 84 NIVKYKGICTEDGGNGIK---LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 140
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMT----EYVVTRWYRAPE 203
YL S +HRDL N+LV + +KI DFGL + + T WY APE
Sbjct: 141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APE 199
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L+ Y S DVWS G ELL
Sbjct: 200 CLMQSKFYIAS-DVWSFGVTLHELL 223
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 12 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 67
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K+ LT +
Sbjct: 68 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR E
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
+W APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 182 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 85
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 134
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 135 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 195 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 240
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL R + + +
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 13 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 68
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K+ LT +
Sbjct: 69 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR E
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
+W APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 183 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 68
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEXMENGSLDSFLRKHDA------QFTV 117
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 118 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 178 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 109/228 (47%), Gaps = 36/228 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 68
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L ++ A Q+ +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA------QFTV 117
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 118 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 178 TRGGKIPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 59
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K S LT +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR E
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
+W APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 174 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 14 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 69
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K+ LT +
Sbjct: 70 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFM 190
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR T+ +F
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 191 TEYVVTRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
++ APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 184 IKWT------APEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 223
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 6 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 61
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K S LT +
Sbjct: 62 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR E
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
+W APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 176 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+ ++ IG+G++G V ++ T + VAIK I + E + +E+ +L V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
S+ ++ K ++++ E + + L L ++L+GL YLHS
Sbjct: 83 TK----YYGSYLKDTK-LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 137
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+HRD+K N+L++ + ++K+ DFG+A +V T ++ APE++ Y
Sbjct: 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AY 196
Query: 212 GTSIDVWSVGCIFAELLGRKP 232
+ D+WS+G EL +P
Sbjct: 197 DSKADIWSLGITAIELARGEP 217
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 109/219 (49%), Gaps = 34/219 (15%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+K IGRGA+G +VA+ K+ NA ++V A++ L + ++L+ +
Sbjct: 79 LKVIGRGAFG------------EVAVVKLKNA--DKVFAMKILNKWEMLKRAETACFREE 124
Query: 95 KDVMMPSHRR-------NFKDVYLVYELMD----TDLHQII-KSSQALTNDHCQYFLFQL 142
+DV++ + F+D +Y +MD DL ++ K L + +++L ++
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFG--LARTSNGKNQFMTEYVVTRWYR 200
+ + +H + +HRD+KP N+L++ N +++ DFG L +G Q + V T Y
Sbjct: 185 VIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ-SSVAVGTPDYI 243
Query: 201 APELLLCCDN----YGTSIDVWSVG-CIFAELLGRKPIF 234
+PE+L + YG D WS+G C++ L G P +
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 9 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 64
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K S LT +
Sbjct: 65 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFM 190
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR T+ +F
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 191 TEYVVTRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
++ APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 179 IKWT------APEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 218
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+ ++ IG+G++G V ++ T + VAIK I+ E + +E+ +L V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
S+ ++ K ++++ E + + L L ++L+GL YLHS
Sbjct: 88 TK----YYGSYLKDTK-LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 142
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+HRD+K N+L++ + ++K+ DFG+A +V T ++ APE ++ Y
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAY 201
Query: 212 GTSIDVWSVGCIFAELLGRKP 232
+ D+WS+G EL +P
Sbjct: 202 DSKADIWSLGITAIELARGEP 222
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 10 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 65
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K S LT +
Sbjct: 66 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFM 190
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR T+ +F
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 191 TEYVVTRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
++ APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 180 IKWT------APEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 219
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 42/234 (17%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 90
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y++ DL++ L
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFL 145
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 206 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 5 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 60
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K S LT +
Sbjct: 61 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR E
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
+W APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 175 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + KVA+K + + A + +AL + ELK++ HL QH
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 109
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVY-----------ELMDTDLHQIIKSSQALTNDHCQY 137
EN++ L Y Y +++TD I +S A T D +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD-LLH 168
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE---YV 194
F Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ + +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+W APE + C Y DVWS G + E+ LG P +PG
Sbjct: 229 PVKW-MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 269
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 59
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K S LT +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR E
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
+W APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 174 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 18/205 (8%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
I+ +G G +G V C T E+VA+K + + N + L+ +E+++LR+L HE
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK--KEIEILRNLYHE 71
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQY-FLFQLLRGLK 147
N++ K + K L+ E + + L + + ++ N Q + Q+ +G+
Sbjct: 72 NIVKYKGICTEDGGNGIK---LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 128
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMT----EYVVTRWYRAPE 203
YL S +HRDL N+LV + +KI DFGL + + T WY APE
Sbjct: 129 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APE 187
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L+ Y S DVWS G ELL
Sbjct: 188 CLMQSKFYIAS-DVWSFGVTLHELL 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 42/234 (17%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 81
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y++ DL++ L
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFL 136
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 197 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 246
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 42/234 (17%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 81
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y++ DL++ L
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFL 136
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 197 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 246
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+ ++ IG+G++G V ++ T + VAIK I + E + +E+ +L V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
S+ ++ K ++++ E + + L L ++L+GL YLHS
Sbjct: 68 TK----YYGSYLKDTK-LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+HRD+K N+L++ + ++K+ DFG+A +V T ++ APE ++ Y
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE-VIKQSAY 181
Query: 212 GTSIDVWSVGCIFAELLGRKP 232
+ D+WS+G EL +P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 96/201 (47%), Gaps = 7/201 (3%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+ ++ IG+G++G V ++ T + VAIK I + E + +E+ +L V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 92 IALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
S+ ++ K ++++ E + + L L ++L+GL YLHS
Sbjct: 68 TK----YYGSYLKDTK-LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+HRD+K N+L++ + ++K+ DFG+A +V T ++ APE ++ Y
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE-VIKQSAY 181
Query: 212 GTSIDVWSVGCIFAELLGRKP 232
+ D+WS+G EL +P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IGRG++ V ++ ET +VA ++ + + + R E + L+ LQH N++ D
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD- 92
Query: 98 MMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN--I 154
S + K + LV EL + L +K + + + Q+L+GL++LH+ I
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 155 LHRDLKPGNLLVNA-NCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
+HRDLK N+ + +KI D GLA + F + T + APE + Y
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLK--RASFAKAVIGTPEFXAPEXYE--EKYDE 208
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
S+DV++ G E + +P +EC N ++ + + + + P+ ++ I+
Sbjct: 209 SVDVYAFGXCXLEXATSE--YPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG 265
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + DA L E
Sbjct: 4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 59
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K S LT +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFM 190
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR T+ +F
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 191 TEYVVTRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
++ APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 174 IKWT------APEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 42/234 (17%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 90
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y++ DL++ L
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFL 145
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 206 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 42/234 (17%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 92
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y+ DL++ L
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK-----DFL 147
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR ++
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 208 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 257
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN--NAFENRVDALRTLRELKLLRHLQH- 88
Y +K IG G V +N E + AIK +N A +D+ R E+ L LQ
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 114
Query: 89 -ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ +I L D + +Y+V E + DL+ +K +++ + + +L +
Sbjct: 115 SDKIIRLYDYEITDQY-----IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSNGKNQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ E DVWS+GCI + K P + +NQ+ + I+ E
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIIDPNHE 286
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+EF D P+ K L D+L+ L DP +RIS+ E L
Sbjct: 287 --IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELLA 320
Query: 316 HPYM 319
HPY+
Sbjct: 321 HPYV 324
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 25 LFEIDTKYVPIKPI-GRGAYGIVCSS--VNRETNEKVAIKKINNAFENRVDALRTLRELK 81
L EID + ++ I G G +G V + + E K A + ++ +R +E K
Sbjct: 1 LLEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVR--QEAK 58
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQ 141
L L+H N+IAL+ V + ++ LV E + S + + D + Q
Sbjct: 59 LFAMLKHPNIIALRGVCLKE-----PNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ 113
Query: 142 LLRGLKYLHSAN---ILHRDLKPGNLLV--------NANCDLKICDFGLARTSNGKNQFM 190
+ RG+ YLH I+HRDLK N+L+ +N LKI DFGLAR + + M
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-RTTKM 172
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECL 240
+ W APE++ + DVWS G + ELL + F G + L
Sbjct: 173 SAAGAYAWM-APEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 109/231 (47%), Gaps = 36/231 (15%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIK--KINNAFENRVDALRTLREL 80
EI+ + I + IG G +G VCS + ++ VAIK K+ + R D L E
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD---FLGEA 74
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFL 139
++ H N+I L+ V+ S K V +V E M+ L +K + Q+ +
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKS-----KPVMIVTEYMENGSLDTFLKKNDG------QFTV 123
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFM 190
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R + + +
Sbjct: 124 IQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 191 TE--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGT 237
T + RW APE + + ++ DVWS G + E++ G +P + T
Sbjct: 184 TRGGKIPIRW-TAPE-AIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 127/311 (40%), Gaps = 61/311 (19%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRT--LRELKLLRHLQ-HENVIAL 94
+G GA+ V + +N T+++ A+K I E + +R+ RE+++L Q H NV+ L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKII----EKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ R YLV+E M + I + + + L +LH+
Sbjct: 77 IEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG 131
Query: 154 ILHRDLKPGNLLV---NANCDLKICDFGLAR-----------------TSNGKNQFMTEY 193
I HRDLKP N+L N +KICDF L T G ++M
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSR 253
VV + + Y D+WS+G I LL P F G R
Sbjct: 192 VVEAFSEEASI------YDKRCDLWSLGVILYILLSGYPPFVG----------------R 229
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPD---AH--PLAIDLLQKMLVFDPTKRI 308
D + D +A +++ + +PD AH A DL+ K+LV D +R+
Sbjct: 230 CGSDCGW-DRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL 288
Query: 309 SVTEALQHPYM 319
S + LQHP++
Sbjct: 289 SAAQVLQHPWV 299
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN--NAFENRVDALRTLRELKLLRHLQH- 88
Y +K IG G V +N E + AIK +N A +D+ R E+ L LQ
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 86
Query: 89 -ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ +I L D + +Y+V E + DL+ +K +++ + + +L +
Sbjct: 87 SDKIIRLYDYEITDQY-----IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 141
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSNGKNQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 142 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ E DVWS+GCI + K P + +NQ+ + I+ E
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIIDPNHE 258
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+EF D P+ K L D+L+ L DP +RIS+ E L
Sbjct: 259 --IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELLA 292
Query: 316 HPYM 319
HPY+
Sbjct: 293 HPYV 296
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN--NAFENRVDALRTLRELKLLRHLQH- 88
Y +K IG G V +N E + AIK +N A +D+ R E+ L LQ
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 86
Query: 89 -ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ +I L D + +Y+V E + DL+ +K +++ + + +L +
Sbjct: 87 SDKIIRLYDYEITDQY-----IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 141
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSNGKNQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 142 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAI 200
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ E DVWS+GCI + K P + +NQ+ + I+ E
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIIDPNHE 258
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+EF D P+ K L D+L+ L DP +RIS+ E L
Sbjct: 259 --IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELLA 292
Query: 316 HPYM 319
HPY+
Sbjct: 293 HPYV 296
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN--NAFENRVDALRTLRELKLLRHLQH- 88
Y +K IG G V +N E + AIK +N A +D+ R E+ L LQ
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 114
Query: 89 -ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ +I L D + +Y+V E + DL+ +K +++ + + +L +
Sbjct: 115 SDKIIRLYDYEITDQY-----IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSNGKNQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ E DVWS+GCI + K P + +NQ+ + I+ E
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIIDPNHE 286
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+EF D P+ K L D+L+ L DP +RIS+ E L
Sbjct: 287 --IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELLA 320
Query: 316 HPYM 319
HPY+
Sbjct: 321 HPYV 324
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN--NAFENRVDALRTLRELKLLRHLQH- 88
Y +K IG G V +N E + AIK +N A +D+ R E+ L LQ
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 114
Query: 89 -ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ +I L D + +Y+V E + DL+ +K +++ + + +L +
Sbjct: 115 SDKIIRLYDYEITDQY-----IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSNGKNQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ E DVWS+GCI + K P + +NQ+ + I+ E
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIIDPNHE 286
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+EF D P+ K L D+L+ L DP +RIS+ E L
Sbjct: 287 --IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELLA 320
Query: 316 HPYM 319
HPY+
Sbjct: 321 HPYV 324
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ +G G +G V + KVA+K + DA L E L++ LQH+ ++ L
Sbjct: 13 VERLGAGQFGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRLVRL 68
Query: 95 KDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHS 151
V+ + +Y++ E M+ L +K S LT + Q+ G+ ++
Sbjct: 69 YAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+ KI DFGLAR E +W APE +
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW-TAPEAI---- 177
Query: 210 NYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
NYGT DVWS G + E++ GR P +PG
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 208
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLREL 80
W+ +E+ + + ++ +G G G V + KVA+K + DA L E
Sbjct: 4 WEDAWEVPRETLKLVERLGAGQAGEVWMGYYN-GHTKVAVKSLKQG-SMSPDAF--LAEA 59
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQY 137
L++ LQH+ ++ L V+ + +Y++ E M+ L +K S LT +
Sbjct: 60 NLMKQLQHQRLVRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR E
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
+W APE + NYGT DVWS G + E++ GR P +PG
Sbjct: 174 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKL 82
EID + I K IG G +G VCS + ++ VAIK + + ++ L E +
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASI 83
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA-LTNDHCQYFLF 140
+ H N+I L+ V+ K V ++ E M+ L ++ + T L
Sbjct: 84 MGQFDHPNIIHLEGVVTKC-----KPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 138
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTE--YVVT 196
+ G+KYL + +HRDL N+LVN+N K+ DFG++R + + + T +
Sbjct: 139 GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 198
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
RW APE + + ++ DVWS G + E++ G +P +
Sbjct: 199 RWT-APE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 236
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN--NAFENRVDALRTLRELKLLRHLQH- 88
Y +K IG G V +N E + AIK +N A +D+ R E+ L LQ
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 70
Query: 89 -ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ +I L D + +Y+V E + DL+ +K +++ + + +L +
Sbjct: 71 SDKIIRLYDYEITDQY-----IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 125
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSNGKNQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 126 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 184
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ E DVWS+GCI + K P + +NQ+ + I+ E
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIIDPNHE 242
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+EF D P+ K L D+L+ L DP +RIS+ E L
Sbjct: 243 --IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELLA 276
Query: 316 HPYM 319
HPY+
Sbjct: 277 HPYV 280
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN--NAFENRVDALRTLRELKLLRHLQH- 88
Y +K IG G V +N E + AIK +N A +D+ R E+ L LQ
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 67
Query: 89 -ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ +I L D + +Y+V E + DL+ +K +++ + + +L +
Sbjct: 68 SDKIIRLYDYEITDQY-----IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 122
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSNGKNQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 123 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ E DVWS+GCI + K P + +NQ+ + I+ E
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIIDPNHE 239
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+EF D P+ K L D+L+ L DP +RIS+ E L
Sbjct: 240 --IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELLA 273
Query: 316 HPYM 319
HPY+
Sbjct: 274 HPYV 277
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN--NAFENRVDALRTLRELKLLRHLQH- 88
Y +K IG G V +N E + AIK +N A +D+ R E+ L LQ
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 66
Query: 89 -ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLK 147
+ +I L D + +Y+V E + DL+ +K +++ + + +L +
Sbjct: 67 SDKIIRLYDYEITDQY-----IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 121
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSNGKNQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 122 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 180
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRRE 255
+ E DVWS+GCI + K P + +NQ+ + I+ E
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIIDPNHE 238
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQ 315
+EF D P+ K L D+L+ L DP +RIS+ E L
Sbjct: 239 --IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELLA 272
Query: 316 HPYM 319
HPY+
Sbjct: 273 HPYV 276
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 52/297 (17%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IGRGAYG V V++ + + +A+K+I + + + + ++R ++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHC-----QYFLFQLLRGLKYL-HS 151
+ D ++ ELM T + K ++ +D ++ L +L +
Sbjct: 90 LFREG-----DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW-----YRAPELL- 205
I+HRD+KP N+L++ + ++K+CDFG++ Q + TR Y APE +
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS------GQLVDSIAKTRDAGCRPYMAPERID 198
Query: 206 --LCCDNYGTSIDVWSVGCIFAEL-LGRKPIFPGTECLNQLKLIINILGSRREEDLEFID 262
Y DVWS+G EL GR P +QL ++ + D +
Sbjct: 199 PSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-------KGDPPQLS 251
Query: 263 NPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYM 319
N + R++ P I+ + L D +KR E L+HP++
Sbjct: 252 NSEEREF-------------------SPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IK +G G +G V N KVAIK + + L E ++++ L+H+ ++ L
Sbjct: 14 IKRLGNGQFGEVWMGT-WNGNTKVAIKTLKPG---TMSPESFLEEAQIMKKLKHDKLVQL 69
Query: 95 KDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQ--ALTNDHCQYFLFQLLRGLKYLHS 151
V+ + + +Y+V E M+ L +K + AL + Q+ G+ Y+
Sbjct: 70 YAVV------SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCD 209
N +HRDL+ N+LV KI DFGLAR N +W APE L
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW-TAPEAAL-YG 181
Query: 210 NYGTSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + EL+ GR P +PG E L Q++
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVP-YPGMNNREVLEQVE 220
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 27 EIDTKYVPIKP-IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKL 82
EID V I+ IG G +G VCS + ++ VAIK + + + + L E +
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASI 61
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQL 142
+ H NVI L+ V+ S V ++ E M+ L + Q+ + QL
Sbjct: 62 MGQFDHPNVIHLEGVVTKS-----TPVMIITEFMENG-----SLDSFLRQNDGQFTVIQL 111
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-----TSNGK-NQF 189
+ G+KYL N +HR L N+LVN+N K+ DFGL+R TS+
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGT 237
+ + RW APE + + ++ DVWS G + E++ G +P + T
Sbjct: 172 LGGKIPIRW-TAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 219
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 22/211 (10%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENV 91
+ I+ IG G +G V + +R + IK++ E + RE+K L L H N+
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE------KAEREVKALAKLDHVNI 66
Query: 92 IALKDVM-----------MPSHRRNFKDVYLVYELMDTD-LHQIIKSSQALTNDHCQYF- 138
+ S R K +++ E D L Q I+ + D
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 139 LF-QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR 197
LF Q+ +G+ Y+HS +++RDLKP N+ + +KI DFGL + + R
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLR 186
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y +PE + D YG +D++++G I AELL
Sbjct: 187 -YMSPEQISSQD-YGKEVDLYALGLILAELL 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKL 82
EID + I K IG G +G VCS + ++ VAIK + + ++ L E +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASI 62
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA-LTNDHCQYFLF 140
+ H N+I L+ V+ K V ++ E M+ L ++ + T L
Sbjct: 63 MGQFDHPNIIHLEGVVTKC-----KPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 117
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTE--YVVT 196
+ G+KYL + +HRDL N+LVN+N K+ DFG++R + + + T +
Sbjct: 118 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 177
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
RW APE + + ++ DVWS G + E++ G +P +
Sbjct: 178 RW-TAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 215
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 20/220 (9%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKL 82
EID + I K IG G +G VCS + ++ VAIK + + ++ L E +
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASI 68
Query: 83 LRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA-LTNDHCQYFLF 140
+ H N+I L+ V+ K V ++ E M+ L ++ + T L
Sbjct: 69 MGQFDHPNIIHLEGVVTKC-----KPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR 123
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART--SNGKNQFMTE--YVVT 196
+ G+KYL + +HRDL N+LVN+N K+ DFG++R + + + T +
Sbjct: 124 GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPI 183
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
RW APE + + ++ DVWS G + E++ G +P +
Sbjct: 184 RW-TAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 221
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 101 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 213
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 67 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 179
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 98/211 (46%), Gaps = 32/211 (15%)
Query: 35 IKPIGRGAYGIVC----SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
I+ +G G +G V N T E VA+K + ++ + RE+++LR L HE+
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRS-GWQREIEILRTLYHEH 72
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHC----QYFLF--QLLR 144
++ K + K V LV E + + S + HC Q LF Q+
Sbjct: 73 IVKYKGC---CEDQGEKSVQLVMEYVP------LGSLRDYLPRHCVGLAQLLLFAQQICE 123
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR------- 197
G+ YLH+ + +HR L N+L++ + +KI DFGLA+ +++ Y V
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY---YRVREDGDSPVF 180
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
WY APE L C Y S DVWS G ELL
Sbjct: 181 WY-APECLKECKFYYAS-DVWSFGVTLYELL 209
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 89 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 201
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 231
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 98/211 (46%), Gaps = 32/211 (15%)
Query: 35 IKPIGRGAYGIVC----SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
I+ +G G +G V N T E VA+K + ++ + RE+++LR L HE+
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRS-GWQREIEILRTLYHEH 71
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHC----QYFLF--QLLR 144
++ K + K V LV E + + S + HC Q LF Q+
Sbjct: 72 IVKYKGC---CEDQGEKSVQLVMEYVP------LGSLRDYLPRHCVGLAQLLLFAQQICE 122
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR------- 197
G+ YLH+ + +HR L N+L++ + +KI DFGLA+ +++ Y V
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY---YRVREDGDSPVF 179
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
WY APE L C Y S DVWS G ELL
Sbjct: 180 WY-APECLKECKFYYAS-DVWSFGVTLYELL 208
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 59/245 (24%)
Query: 109 VYLVYELMDTDLHQIIKSSQALTND---HCQY----FLFQLLRGLKYLHSANILHRDLKP 161
+Y+ EL + +L +++S + +Y L Q+ G+ +LHS I+HRDLKP
Sbjct: 84 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKP 143
Query: 162 GNLLVNA-------------NCDLKICDFGLART-SNGKNQFMTEY---VVTRWYRAPEL 204
N+LV+ N + I DFGL + +G++ F T T +RAPEL
Sbjct: 144 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPEL 203
Query: 205 LLCCDNYGT------SIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSRREE 256
L +N T SID++S+GC+F +L G+ P G + + +I I
Sbjct: 204 LEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF--GDKYSRESNIIRGIFS----- 256
Query: 257 DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
L+ + R I A DL+ +M+ DP KR + + L+H
Sbjct: 257 -LDEMKCLHDRSLIAE-------------------ATDLISQMIDHDPLKRPTAMKVLRH 296
Query: 317 PYMSP 321
P P
Sbjct: 297 PLFWP 301
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 108/251 (43%), Gaps = 47/251 (18%)
Query: 8 PNGIRSPGKHYYSMWQTLFEIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIKKI 63
P+ PG+ S + EI+ + I K IG G G VC R ++ VAIK +
Sbjct: 29 PHTYEEPGRAGRSFTR---EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL 85
Query: 64 NNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQI 123
+ R L E ++ H N+I L+ V+ Y+ +DT L
Sbjct: 86 KAGYTER-QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-- 142
Query: 124 IKSSQALTNDHCQYFLFQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICD 176
T+D Q+ + QL+ G++YL +HRDL N+LV++N K+ D
Sbjct: 143 -------THD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 177 FGLAR-----------TSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFA 225
FGL+R T+ GK + RW APE + + ++ DVWS G +
Sbjct: 195 FGLSRVLEDDPDAAXTTTGGK-------IPIRWT-APE-AIAFRTFSSASDVWSFGVVMW 245
Query: 226 ELL--GRKPIF 234
E+L G +P +
Sbjct: 246 EVLAYGERPYW 256
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 81 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 193
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 223
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 82 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 194
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 82 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 194
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 82 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 194
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 81 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 193
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 223
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 67 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 179
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 95 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 207
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 94 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 206
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 94 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 206
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 95 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 207
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 94 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 206
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 108/251 (43%), Gaps = 47/251 (18%)
Query: 8 PNGIRSPGKHYYSMWQTLFEIDTKYVPI-KPIGRGAYGIVCSSVNRETNEK---VAIKKI 63
P+ PG+ S + EI+ + I K IG G G VC R ++ VAIK +
Sbjct: 29 PHTYEEPGRAGRSFTR---EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL 85
Query: 64 NNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQI 123
+ R L E ++ H N+I L+ V+ Y+ +DT L
Sbjct: 86 KAGYTER-QRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-- 142
Query: 124 IKSSQALTNDHCQYFLFQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICD 176
T+D Q+ + QL+ G++YL +HRDL N+LV++N K+ D
Sbjct: 143 -------THD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 177 FGLAR-----------TSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFA 225
FGL+R T+ GK + RW APE + + ++ DVWS G +
Sbjct: 195 FGLSRVLEDDPDAAYTTTGGK-------IPIRWT-APE-AIAFRTFSSASDVWSFGVVMW 245
Query: 226 ELL--GRKPIF 234
E+L G +P +
Sbjct: 246 EVLAYGERPYW 256
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 95 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 207
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 114 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 168
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 226
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 256
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 38/240 (15%)
Query: 36 KPIGRGAYGIV----CSSVNRETNE-KVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+ +G GA+G V C ++ E ++ VA+K + +A +N RE +LL +LQHE+
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH--REAELLTNLQHEH 76
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSS-------------QALTNDHCQ 136
++ V + + +V+E M DL++ +++ LT
Sbjct: 77 IVKFYGVCVEG-----DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 137 YFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMT---EY 193
+ Q+ G+ YL S + +HRDL N LV N +KI DFG++R + +
Sbjct: 132 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGT-----ECLNQLKLI 246
+ RW PE ++ + T DVWS+G + E+ G++P + + EC+ Q +++
Sbjct: 192 LPIRWM-PPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL 249
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 109 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 221
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 67 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 179
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 66 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 178
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 208
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 95 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 207
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 94 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 206
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IGRG +G V S R N VA+K + A + L+E ++L+ H N++ L V
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLIGV 180
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA-LTNDHCQYFLFQLLRGLKYLHSANIL 155
+ +Y+V EL+ D +++ A L + G++YL S +
Sbjct: 181 CTQK-----QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 156 HRDLKPGNLLVNANCDLKICDFGLAR--------TSNGKNQFMTEYVVTRWYRAPELLLC 207
HRDL N LV LKI DFG++R S G Q V +W APE L
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQ-----VPVKW-TAPEAL-- 287
Query: 208 CDNYG---TSIDVWSVGCIFAEL--LGRKP 232
NYG + DVWS G + E LG P
Sbjct: 288 --NYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 155/389 (39%), Gaps = 82/389 (21%)
Query: 6 EPPNGIRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINN 65
E PN G H + LF + +Y I+ +G G + V S + + + VA+K + +
Sbjct: 16 EDPNDYCKGGYHLVKI-GDLF--NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS 72
Query: 66 AFENRVDALRTLRELKLLRHL-----QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDL 120
A AL +R LK +R+ E V+ L D S N + +V+E++ L
Sbjct: 73 AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS-GVNGTHICMVFEVLGHHL 131
Query: 121 -HQIIKSS-QALTNDHCQYFLFQLLRGLKYLHS-ANILHRDLKPGNLLVNAN-------- 169
IIKS+ Q L + + Q+L+GL YLH+ I+H D+KP N+L++ N
Sbjct: 132 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 191
Query: 170 -----------------------------------------CDLKICDFGLARTSNGKNQ 188
+KI D G + ++
Sbjct: 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLG---NACWVHK 248
Query: 189 FMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIF---PGTECL---NQ 242
TE + TR YR+ E+L+ Y T D+WS C+ EL +F G E +
Sbjct: 249 HFTEDIQTRQYRSLEVLIGS-GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDH 307
Query: 243 LKLIINILGS-------RREEDLEFIDNPKARKYIKSL-PYTPGTPFSRLYPDAHPLA-- 292
+ LII +LG + EF K+I L P+ Y + A
Sbjct: 308 IALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAG 367
Query: 293 -IDLLQKMLVFDPTKRISVTEALQHPYMS 320
D L ML P KR + E L+HP+++
Sbjct: 368 FTDFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 132/293 (45%), Gaps = 64/293 (21%)
Query: 52 RETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYL 111
+ N+K++IK + F+N EL+++ +++E + + ++ N+ +VY+
Sbjct: 75 KSNNDKISIKSKYDDFKN---------ELQIITDIKNEYCLTCEGIIT-----NYDEVYI 120
Query: 112 VYELMDTDLHQIIKSSQALTNDHCQYFLF-----------QLLRGLKYLHS-ANILHRDL 159
+YE M+ D I+K + Y F +L Y+H+ NI HRD+
Sbjct: 121 IYEYMEND--SILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV 178
Query: 160 KPGNLLVNANCDLKICDFGLA--------RTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
KP N+L++ N +K+ DFG + + S G +FM PE +Y
Sbjct: 179 KPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFM----------PPEFFSNESSY 228
Query: 212 -GTSIDVWSVG-CIFAELLGRKPIFPGTECLNQLKL-IINILGSRREEDLEFIDNPKARK 268
G +D+WS+G C++ P LK+ ++ + + R +++E+ P R
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVPF--------SLKISLVELFNNIRTKNIEY---PLDRN 277
Query: 269 -YIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
++ L T + + ID L+ L +P +RI+ +AL+H +++
Sbjct: 278 HFLYPLTNKKSTCSNNFLSNED---IDFLKLFLRKNPAERITSEDALKHEWLA 327
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 92/210 (43%), Gaps = 31/210 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IGRG +G V S R N VA+K + A + L+E ++L+ H N++ L V
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLIGV 180
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA-LTNDHCQYFLFQLLRGLKYLHSANIL 155
+ +Y+V EL+ D +++ A L + G++YL S +
Sbjct: 181 CTQK-----QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 156 HRDLKPGNLLVNANCDLKICDFGLAR--------TSNGKNQFMTEYVVTRWYRAPELLLC 207
HRDL N LV LKI DFG++R S G Q V +W APE L
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQ-----VPVKW-TAPEAL-- 287
Query: 208 CDNYG---TSIDVWSVGCIFAEL--LGRKP 232
NYG + DVWS G + E LG P
Sbjct: 288 --NYGRYSSESDVWSFGILLWETFSLGASP 315
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 109 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 221
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 42/232 (18%)
Query: 36 KPIGRGAYGIVCSS----VNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE-N 90
KP+GRGA+G V + +++ + K+ + + ELK+L H+ H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 VIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN 132
V+ L K + ++ R+ ++ ++ Y+ + D LT
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF---------LTL 143
Query: 133 DHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR ++ +
Sbjct: 144 EHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 204 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 251
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHENVIALKD 96
+G+GA V +++T + AIK NN +F VD +RE ++L+ L H+N++ L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKLNHKNIVKLFA 74
Query: 97 VMMPSHRRNFKDVYLVYELMD-TDLHQIIK---SSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ + R+ L+ E L+ +++ ++ L L ++ G+ +L
Sbjct: 75 IEEETTTRH---KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 153 NILHRDLKPGNLL----VNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPEL---- 204
I+HR++KPGN++ + K+ DFG AR QF++ Y T Y P++
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-GTEEYLHPDMYERA 190
Query: 205 LLCCDN---YGTSIDVWSVGCIF 224
+L D+ YG ++D+WS+G F
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTF 213
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G++G V + ++ V I + RV+ LRE+ +++ L+H N++
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEF--LREVAIMKRLRHPNIVLFMGA 102
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN--IL 155
+ + YL + LH+ Q L + + +G+ YLH+ N I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 156 HRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSI 215
HRDLK NLLV+ +K+CDFGL+R T + APE+L + S
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS- 220
Query: 216 DVWSVGCIFAEL 227
DV+S G I EL
Sbjct: 221 DVYSFGVILWEL 232
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 131/284 (46%), Gaps = 41/284 (14%)
Query: 35 IKPIGRGAYG---IVCSSVNRETNEKVAIKKINNA--FENRVDALRTLRELKLLRHLQHE 89
+K +G GAYG +V +T + A+K + A + T E ++L H++
Sbjct: 59 LKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQS 118
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
+ + + ++L+ + ++ +L + + T Q ++ +++ L++
Sbjct: 119 PFLVTLHYAFQTETK----LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEH 174
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-SNGKNQFMTEYVVTRWYRAPELLLC 207
LH I++RD+K N+L+++N + + DFGL++ + + ++ T Y AP+++
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 208 CDN-YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
D+ + ++D WS+G + ELL G P E +Q ++
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-------------------- 274
Query: 266 ARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRIS 309
+R+ +KS P P + LA DL+Q++L+ DP KR+
Sbjct: 275 SRRILKSEPPYP--------QEMSALAKDLIQRLLMKDPKKRLG 310
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 103/237 (43%), Gaps = 39/237 (16%)
Query: 23 QTLFEIDTKY----VPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLR 78
+T + +D ++ I+ IG G +G V + +R + I+++ E + R
Sbjct: 1 ETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE------KAER 54
Query: 79 ELKLLRHLQHENVIALKDVM------------------------MPSHRRNFKDVYLVYE 114
E+K L L H N++ S R K +++ E
Sbjct: 55 EVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQME 114
Query: 115 LMDTD-LHQIIKSSQALTNDHCQYF-LF-QLLRGLKYLHSANILHRDLKPGNLLVNANCD 171
D L Q I+ + D LF Q+ +G+ Y+HS ++HRDLKP N+ +
Sbjct: 115 FCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ 174
Query: 172 LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
+KI DFGL TS + T T Y +PE + D YG +D++++G I AELL
Sbjct: 175 VKIGDFGLV-TSLKNDGKRTRSKGTLRYMSPEQISSQD-YGKEVDLYALGLILAELL 229
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 123/295 (41%), Gaps = 45/295 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDA-LRTLRELKLLRHLQHENVIALKD 96
+G+G +G VC+ R T + A KK+ + L E ++L + V++L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-- 249
Query: 97 VMMPSHRRNFKDVY-LVYELM---DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
++ KD LV LM D H ++ ++ GL+ LH
Sbjct: 250 ----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
I++RDLKP N+L++ + ++I D GLA + Q + V T Y APE++ + Y
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVK-NERYT 363
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
S D W++GC+ E++ G Q K I +REE + +K
Sbjct: 364 FSPDWWALGCLLYEMIA------GQSPFQQRKKKI-----KREE---------VERLVKE 403
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRI-----SVTEALQHPYMSPL 322
+P FS P A L ++L DP +R+ S E +HP L
Sbjct: 404 VPEEYSERFS-------PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 62 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 117 WQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 174
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + KVA+K + + A + +AL + ELK++ HL QH
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 109
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVY-----------ELMDTDLHQIIKSSQALTNDHCQY 137
EN++ L Y Y +++TD I +S T D +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD-LLH 168
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE---YV 194
F Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ + +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+W APE + C Y DVWS G + E+ LG P +PG
Sbjct: 229 PVKW-MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 269
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 65 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 119
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 177
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 207
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKD- 96
+G+G++G V S + T+E A+K + + D + + + V+AL
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT--------MVEKRVLALPGK 79
Query: 97 ----VMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
+ S + +Y V E ++ DL I+ H ++ ++ GL +L S
Sbjct: 80 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 139
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
I++RDLK N+++++ +KI DFG+ + + + T Y APE ++ Y
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE-IIAYQPY 198
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTE 238
G S+D W+ G + E+L + F G +
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGED 225
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ +G G +G V + KVA+K + DA L E L++ LQH+ ++ L
Sbjct: 14 VERLGAGQFGEVWMGY-YNGHTKVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRLVRL 69
Query: 95 KDVMMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHS 151
V+ + +Y++ E M+ L +K S LT + Q+ G+ ++
Sbjct: 70 YAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV--TRWYRAPELLLCCD 209
N +HR+L+ N+LV+ KI DFGLAR E +W APE +
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW-TAPEAI---- 178
Query: 210 NYGT---SIDVWSVGCIFAELL--GRKPIFPG 236
NYGT DVWS G + E++ GR P +PG
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 209
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 41/289 (14%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALR-TLRELKLLRHLQHEN 90
++ + +GRG +G V + + T + A KK+N + + + E K+L +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTD-----LHQIIKSSQALTNDHCQYFLFQLLRG 145
+++L D+ LV +M+ ++ + + + ++ Q++ G
Sbjct: 247 IVSLAYAFETK-----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
L++LH NI++RDLKP N+L++ + +++I D GLA Y T + APELL
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
L + Y S+D +++G E++ + F +R E+ ++N +
Sbjct: 362 L-GEEYDFSVDYFALGVTLYEMIAARGPFR----------------ARGEK----VENKE 400
Query: 266 ARKYIKSLPYTPGTPFSRLYPDA-HPLAIDLLQKMLVFDPTKRISVTEA 313
++ + T YPD P + D + +L DP KR+ +
Sbjct: 401 LKQRVLEQAVT--------YPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 41/289 (14%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALR-TLRELKLLRHLQHEN 90
++ + +GRG +G V + + T + A KK+N + + + E K+L +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTD-----LHQIIKSSQALTNDHCQYFLFQLLRG 145
+++L D+ LV +M+ ++ + + + ++ Q++ G
Sbjct: 247 IVSLAYAFETK-----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
L++LH NI++RDLKP N+L++ + +++I D GLA Y T + APELL
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
L + Y S+D +++G E++ + F +R E+ ++N +
Sbjct: 362 L-GEEYDFSVDYFALGVTLYEMIAARGPFR----------------ARGEK----VENKE 400
Query: 266 ARKYIKSLPYTPGTPFSRLYPDA-HPLAIDLLQKMLVFDPTKRISVTEA 313
++ + T YPD P + D + +L DP KR+ +
Sbjct: 401 LKQRVLEQAVT--------YPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 62 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 174
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 41/289 (14%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALR-TLRELKLLRHLQHEN 90
++ + +GRG +G V + + T + A KK+N + + + E K+L +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTD-----LHQIIKSSQALTNDHCQYFLFQLLRG 145
+++L D+ LV +M+ ++ + + + ++ Q++ G
Sbjct: 247 IVSLAYAFETK-----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
L++LH NI++RDLKP N+L++ + +++I D GLA Y T + APELL
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
L + Y S+D +++G E++ + F +R E+ ++N +
Sbjct: 362 L-GEEYDFSVDYFALGVTLYEMIAARGPFR----------------ARGEK----VENKE 400
Query: 266 ARKYIKSLPYTPGTPFSRLYPDA-HPLAIDLLQKMLVFDPTKRISVTEA 313
++ + T YPD P + D + +L DP KR+ +
Sbjct: 401 LKQRVLEQAVT--------YPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 123/295 (41%), Gaps = 45/295 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDA-LRTLRELKLLRHLQHENVIALKD 96
+G+G +G VC+ R T + A KK+ + L E ++L + V++L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-- 249
Query: 97 VMMPSHRRNFKDVY-LVYELM---DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
++ KD LV LM D H ++ ++ GL+ LH
Sbjct: 250 ----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
I++RDLKP N+L++ + ++I D GLA + Q + V T Y APE++ + Y
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVK-NERYT 363
Query: 213 TSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKS 272
S D W++GC+ E++ G Q K I +REE + +K
Sbjct: 364 FSPDWWALGCLLYEMIA------GQSPFQQRKKKI-----KREE---------VERLVKE 403
Query: 273 LPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRI-----SVTEALQHPYMSPL 322
+P FS P A L ++L DP +R+ S E +HP L
Sbjct: 404 VPEEYSERFS-------PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 127/289 (43%), Gaps = 41/289 (14%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALR-TLRELKLLRHLQHEN 90
++ + +GRG +G V + + T + A KK+N + + + E K+L +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTD-----LHQIIKSSQALTNDHCQYFLFQLLRG 145
+++L D+ LV +M+ ++ + + + ++ Q++ G
Sbjct: 247 IVSLAYAFETK-----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELL 205
L++LH NI++RDLKP N+L++ + +++I D GLA Y T + APELL
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 206 LCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPK 265
L + Y S+D +++G E++ + F +R E+ ++N +
Sbjct: 362 L-GEEYDFSVDYFALGVTLYEMIAARGPFR----------------ARGEK----VENKE 400
Query: 266 ARKYIKSLPYTPGTPFSRLYPDA-HPLAIDLLQKMLVFDPTKRISVTEA 313
++ + T YPD P + D + +L DP KR+ +
Sbjct: 401 LKQRVLEQAVT--------YPDKFSPASKDFCEALLQKDPEKRLGFRDG 441
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFE--NRVDALRTLRELKLLRHLQHE 89
Y +K IGRGA+G V V ++ KV K+ + FE R D+ E ++
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
V+ L +Y+V E M DL ++ S+ + +++ +++ L
Sbjct: 135 WVVQLFYAFQDDRY-----LYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDA 188
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-TRWYRAPELLLC 207
+HS +HRD+KP N+L++ + LK+ DFG N + + V T Y +PE+L
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 208 CDN---YGTSIDVWSVGCIFAELL-GRKPIFPGT 237
YG D WSVG E+L G P + +
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIN----NAFENRVDALRTLRELKLL 83
++++Y +G G +G V S + N VAIK + + + + R E+ LL
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 84 RHLQH--ENVIALKDVMMPSHRRNFKDVYLVYELMD--TDLHQIIKSSQALTNDHCQYFL 139
+ + VI L D L+ E + DL I AL + + F
Sbjct: 62 KKVSSGFSGVIRLLDWF-----ERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSNGKNQFMTEYVVTRW 198
+Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG K+ T++ TR
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL--KDTVYTDFDGTRV 174
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
Y PE + +G S VWS+G + +++
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG+G +G V R KVA+K I +N A L E ++ L+H N++ L
Sbjct: 198 LQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSS--QALTNDHCQYFLFQLLRGLKYLHS 151
V++ +Y+V E M L ++S L D F + ++YL
Sbjct: 252 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL N+LV+ + K+ DFGL + ++ T + +W APE L +
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKF 363
Query: 212 GTSIDVWSVGCIFAEL--LGRKP 232
T DVWS G + E+ GR P
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVP 386
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 147/367 (40%), Gaps = 79/367 (21%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL- 86
+ +Y I+ +G G + V S + + + VA+K + +A AL +R LK +R+
Sbjct: 19 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSD 78
Query: 87 ----QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDL-HQIIKSS-QALTNDHCQYFLF 140
E V+ L D S N + +V+E++ L IIKS+ Q L + +
Sbjct: 79 PNDPNREMVVQLLDDFKIS-GVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 137
Query: 141 QLLRGLKYLHS-ANILHRDLKPGNLLVNAN------------------------------ 169
Q+L+GL YLH+ I+H D+KP N+L++ N
Sbjct: 138 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 197
Query: 170 -------------------CDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDN 210
+KI D G + ++ TE + TR YR+ E+L+
Sbjct: 198 PATAGNFLVNPLEPKNAEKLKVKIADLG---NACWVHKHFTEDIQTRQYRSLEVLI-GSG 253
Query: 211 YGTSIDVWSVGCIFAELLGRKPIF---PGTECL---NQLKLIINILGS-------RREED 257
Y T D+WS C+ EL +F G E + + LII +LG +
Sbjct: 254 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS 313
Query: 258 LEFIDNPKARKYIKSL-PYTPGTPFSRLYPDAHPLA---IDLLQKMLVFDPTKRISVTEA 313
EF K+I L P+ Y + A D L ML P KR + E
Sbjct: 314 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC 373
Query: 314 LQHPYMS 320
L+HP+++
Sbjct: 374 LRHPWLN 380
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFE--NRVDALRTLRELKLLRHLQHE 89
Y +K IGRGA+G V V ++ KV K+ + FE R D+ E ++
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
V+ L +Y+V E M DL ++ S+ + +++ +++ L
Sbjct: 135 WVVQLFYAFQDDRY-----LYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDA 188
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-TRWYRAPELLLC 207
+HS +HRD+KP N+L++ + LK+ DFG N + + V T Y +PE+L
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 208 CDN---YGTSIDVWSVGCIFAELL-GRKPIFPGT 237
YG D WSVG E+L G P + +
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 97/214 (45%), Gaps = 15/214 (7%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFE--NRVDALRTLRELKLLRHLQHE 89
Y +K IGRGA+G V V ++ KV K+ + FE R D+ E ++
Sbjct: 71 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
V+ L +Y+V E M DL ++ S+ + +++ +++ L
Sbjct: 130 WVVQLFYAFQDDRY-----LYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLALDA 183
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-TRWYRAPELLLC 207
+HS +HRD+KP N+L++ + LK+ DFG N + + V T Y +PE+L
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 208 CDN---YGTSIDVWSVGCIFAELL-GRKPIFPGT 237
YG D WSVG E+L G P + +
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 106/235 (45%), Gaps = 50/235 (21%)
Query: 27 EIDTKYVPI-KPIGRGAYGIVCSS---VNRETNEKVAIK--KINNAFENRVDALRTLREL 80
E+D + I + IG G +G VCS + + + VAIK K+ + R D L E
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD---FLCEA 95
Query: 81 KLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDH-CQYFL 139
++ H NV+ L+ V+ K V +V E M+ + A H Q+ +
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRG-----KPVMIVIEFMENG------ALDAFLRKHDGQFTV 144
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------- 181
QL+ G++YL +HRDL N+LVN+N K+ DFGL+R
Sbjct: 145 IQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYT 204
Query: 182 TSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
T+ GK + RW APE + + ++ DVWS G + E++ G +P +
Sbjct: 205 TTGGK-------IPVRW-TAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYW 250
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 40/232 (17%)
Query: 36 KPIGRGAYGIVCSS----VNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE-N 90
KP+GRGA+G V + +++ + K+ + + ELK+L H+ H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 91 VIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN 132
V+ L K + ++ R+ ++ ++ Y+ DL++ LT
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK--PEDLYK-----DFLTL 147
Query: 133 DHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + +
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 208 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 15/214 (7%)
Query: 32 YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFE--NRVDALRTLRELKLLRHLQHE 89
Y +K IGRGA+G V V + ++KV K+ + FE R D+ E ++
Sbjct: 77 YDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
V+ L ++ K +Y+V E M DL ++ S+ + +++ +++ L
Sbjct: 136 WVVQLFCAF-----QDDKYLYMVMEYMPGGDLVNLM-SNYDVPEKWAKFYTAEVVLALDA 189
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV-TRWYRAPELLLC 207
+HS ++HRD+KP N+L++ + LK+ DFG + + V T Y +PE+L
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 208 CDN---YGTSIDVWSVGC-IFAELLGRKPIFPGT 237
YG D WSVG +F L+G P + +
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG+G +G V R KVA+K I +N A L E ++ L+H N++ L
Sbjct: 26 LQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSS--QALTNDHCQYFLFQLLRGLKYLHS 151
V++ +Y+V E M L ++S L D F + ++YL
Sbjct: 80 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL N+LV+ + K+ DFGL + ++ T + +W APE L +
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKF 191
Query: 212 GTSIDVWSVGCIFAEL--LGRKP 232
T DVWS G + E+ GR P
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVP 214
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 25/246 (10%)
Query: 10 GIRSPGKHYYSMWQTLFEIDTKYVPIK-PIGRGAYGIVCSSVNRETNEKVAIKKINNAFE 68
G P Y W E++ + +K +G G YG V V ++ + VA+K + E
Sbjct: 1 GAMDPSSPNYDKW----EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK---E 53
Query: 69 NRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIK-- 125
+ ++ L+E +++ ++H N++ L V Y++ E M +L ++
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFYIITEFMTYGNLLDYLREC 108
Query: 126 SSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNG 185
+ Q ++ Y Q+ ++YL N +HRDL N LV N +K+ DFGL+R G
Sbjct: 109 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 186 KNQFMTEYVVTRW---YRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPGTECL 240
T + ++ + APE L + + DVW+ G + E+ G P +PG +
Sbjct: 169 DT--YTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPGIDLS 224
Query: 241 NQLKLI 246
+L+
Sbjct: 225 QVYELL 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG+G +G V R KVA+K I +N A L E ++ L+H N++ L
Sbjct: 17 LQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 70
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSS--QALTNDHCQYFLFQLLRGLKYLHS 151
V++ +Y+V E M L ++S L D F + ++YL
Sbjct: 71 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL N+LV+ + K+ DFGL + ++ T + +W APE L +
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALREA-AF 182
Query: 212 GTSIDVWSVGCIFAEL--LGRKP 232
T DVWS G + E+ GR P
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVP 205
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 22/203 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINN-AFENRVDALRTLRELKLLRHLQHENVIALKD 96
+G+GA V +++T + AIK NN +F VD +RE ++L+ L H+N++ L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKLNHKNIVKLFA 74
Query: 97 VMMPSHRRNFKDVYLVYELMD-TDLHQIIK---SSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ + R+ L+ E L+ +++ ++ L L ++ G+ +L
Sbjct: 75 IEEETTTRH---KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 153 NILHRDLKPGNLL----VNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPEL---- 204
I+HR++KPGN++ + K+ DFG AR QF+ Y T Y P++
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY-GTEEYLHPDMYERA 190
Query: 205 LLCCDN---YGTSIDVWSVGCIF 224
+L D+ YG ++D+WS+G F
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTF 213
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKD- 96
+G+G++G V S + T+E A+K + + D + + + V+AL
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT--------MVEKRVLALPGK 400
Query: 97 ----VMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
+ S + +Y V E ++ DL I+ H ++ ++ GL +L S
Sbjct: 401 PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 460
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
I++RDLK N+++++ +KI DFG+ + + + T Y APE ++ Y
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE-IIAYQPY 519
Query: 212 GTSIDVWSVGCIFAELLGRKPIFPGTE 238
G S+D W+ G + E+L + F G +
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGED 546
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
++ IG+G +G V R KVA+K I +N A L E ++ L+H N++ L
Sbjct: 11 LQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSS--QALTNDHCQYFLFQLLRGLKYLHS 151
V++ +Y+V E M L ++S L D F + ++YL
Sbjct: 65 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL N+LV+ + K+ DFGL + ++ T + +W APE L +
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKF 176
Query: 212 GTSIDVWSVGCIFAEL--LGRKP 232
T DVWS G + E+ GR P
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVP 199
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 76 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPE-SLAYNKF 187
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
DVW+ G + E+ G P +PG +
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP-YPGID 215
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 92 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + + +W L
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 206
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 260
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 82 V------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 25/246 (10%)
Query: 10 GIRSPGKHYYSMWQTLFEIDTKYVPIK-PIGRGAYGIVCSSVNRETNEKVAIKKINNAFE 68
G P Y W E++ + +K +G G YG V V ++ + VA+K + E
Sbjct: 1 GAMDPSSPNYDKW----EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK---E 53
Query: 69 NRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIK-- 125
+ ++ L+E +++ ++H N++ L V Y++ E M +L ++
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFYIITEFMTYGNLLDYLREC 108
Query: 126 SSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNG 185
+ Q + Y Q+ ++YL N +HRDL N LV N +K+ DFGL+R G
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 186 KNQFMTEYVVTRW---YRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPGTECL 240
T + ++ + APE L + + DVW+ G + E+ G P +PG +
Sbjct: 169 DTX--TAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPGIDLS 224
Query: 241 NQLKLI 246
+L+
Sbjct: 225 QVYELL 230
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 76 CTRE-----PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE-SLAYNKF 187
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
DVW+ G + E+ G P +PG +
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP-YPGID 215
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 115 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + + +W L
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 229
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 283
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 116 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + + +W L
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 230
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 284
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 89 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + + +W L
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 203
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 257
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 78 CTRE-----PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 43/287 (14%)
Query: 36 KPIGRGAYGIVCSSVNRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+P+G+G +G V + ++++ VA+K + + E + RE+++ HL H N++ L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ R +YL+ E +L++ ++ S + +L L Y H
Sbjct: 89 YNYFYDRRR-----IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGT 213
++HRD+KP NLL+ +LKI DFG + + + T Y PE++ +
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGW--SVHAPSLRRKTMCGTLDYLPPEMIE-GRMHNE 200
Query: 214 SIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSRREEDLEFIDNPKARKYIKSL 273
+D+W +G + ELL P F + I+ + DL+F
Sbjct: 201 KVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-------DLKF------------- 240
Query: 274 PYTPGTPFSRLYPDAHPL-AIDLLQKMLVFDPTKRISVTEALQHPYM 319
P + P A DL+ K+L +P++R+ + + HP++
Sbjct: 241 ------------PASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWV 275
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 95 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + + +W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 209
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 263
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 94 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + + +W L
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 208
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 262
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 97 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + + +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 211
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 265
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 96 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + + +W L
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 210
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 264
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
IG G++G V + ++ V I + RV+ LRE+ +++ L+H N++
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEF--LREVAIMKRLRHPNIVLFMGA 102
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSAN--IL 155
+ + YL + LH+ Q L + + +G+ YLH+ N I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ-LDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 156 HRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSI 215
HR+LK NLLV+ +K+CDFGL+R T + APE+L + S
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS- 220
Query: 216 DVWSVGCIFAEL 227
DV+S G I EL
Sbjct: 221 DVYSFGVILWEL 232
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 19 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 75 V------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 128
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+ +F ++ APE L
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 181
Query: 208 CDNYGTSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + EL GR P +PG E L+Q++
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 222
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 104/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 97 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + + +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 211
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 265
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 78 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 10/209 (4%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL-QHENVIALKD 96
+G G+YG V ++E A+K+ + F D R L E+ + QH + L+
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 97 VMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSANIL 155
+YL EL L Q ++ +L +L L L +LHS ++
Sbjct: 125 AW-----EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179
Query: 156 HRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSI 215
H D+KP N+ + K+ DFGL + R Y APELL +YGT+
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-YMAPELLQ--GSYGTAA 236
Query: 216 DVWSVGCIFAELLGRKPIFPGTECLNQLK 244
DV+S+G E+ + G E QL+
Sbjct: 237 DVFSLGLTILEVACNMELPHGGEGWQQLR 265
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 78 CTRE-----PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 78 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 15 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 71 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 124
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+ +F ++ APE L
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 177
Query: 208 CDNYGTSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + EL GR P +PG E L+Q++
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 218
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 23 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M+ L +K + + L Q+ G+ Y+ N
Sbjct: 79 V------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+ +F ++ APE L
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT------APEAAL- 185
Query: 208 CDNYGTSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + EL GR P +PG E L+Q++
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 226
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 110/246 (44%), Gaps = 25/246 (10%)
Query: 10 GIRSPGKHYYSMWQTLFEIDTKYVPIK-PIGRGAYGIVCSSVNRETNEKVAIKKINNAFE 68
G P Y W E++ + +K +G G YG V V ++ + VA+K + E
Sbjct: 1 GAMDPSSPNYDKW----EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK---E 53
Query: 69 NRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIK-- 125
+ ++ L+E +++ ++H N++ L V Y++ E M +L ++
Sbjct: 54 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPFYIITEFMTYGNLLDYLREC 108
Query: 126 SSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNG 185
+ Q + Y Q+ ++YL N +HRDL N LV N +K+ DFGL+R G
Sbjct: 109 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 168
Query: 186 KNQFMTEYVVTRW---YRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPGTECL 240
T + ++ + APE L + + DVW+ G + E+ G P +PG +
Sbjct: 169 DT--YTAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSP-YPGIDLS 224
Query: 241 NQLKLI 246
+L+
Sbjct: 225 QVYELL 230
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 23 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M+ L +K + + L Q+ G+ Y+ N
Sbjct: 79 V------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+ +F ++ APE L
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 185
Query: 208 CDNYGTSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + EL GR P +PG E L+Q++
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 226
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 17 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 73 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 126
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+ +F ++ APE L
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 179
Query: 208 CDNYGTSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + EL GR P +PG E L+Q++
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 220
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 38 IGRGAYGIVCSSVNRETNEK--VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALK 95
+G G +G V V R ++ VAIK + E + D +RE +++ L + ++ L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 96 DVMMPSHRRNFKDVYLVYELMDTD-LHQ-IIKSSQALTNDHCQYFLFQLLRGLKYLHSAN 153
V + + LV E+ LH+ ++ + + + L Q+ G+KYL N
Sbjct: 77 GVCQA------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDN 210
+HRDL N+L+ KI DFGL++ + + T +W + APE C N
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE----CIN 186
Query: 211 ---YGTSIDVWSVGCIFAELL--GRKP 232
+ + DVWS G E L G+KP
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 59/245 (24%)
Query: 109 VYLVYELMDTDLHQIIKSSQALTND---HCQY----FLFQLLRGLKYLHSANILHRDLKP 161
+Y+ EL + +L +++S + +Y L Q+ G+ +LHS I+HRDLKP
Sbjct: 84 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKP 143
Query: 162 GNLLVNA-------------NCDLKICDFGLART-SNGKNQF---MTEYVVTRWYRAPEL 204
N+LV+ N + I DFGL + +G+ F + T +RAPEL
Sbjct: 144 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPEL 203
Query: 205 LLCCDNYGT------SIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSRREE 256
L +N T SID++S+GC+F +L G+ P G + + +I I
Sbjct: 204 LEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF--GDKYSRESNIIRGIFS----- 256
Query: 257 DLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQH 316
L+ + R I A DL+ +M+ DP KR + + L+H
Sbjct: 257 -LDEMKCLHDRSLIAE-------------------ATDLISQMIDHDPLKRPTAMKVLRH 296
Query: 317 PYMSP 321
P P
Sbjct: 297 PLFWP 301
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 79 CTRE-----PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE-SLAYNKF 190
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 226
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNA-FENRVDALRTLRELKLLRHLQHENVIALKD 96
IGRG +G V +T + A+K ++ + + L E +L ++++ D
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML------SLVSTGD 250
Query: 97 ----VMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
V M + + +LM+ DLH + + +++ +++ GL+++H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+++RDLKP N+L++ + ++I D GLA + K + V T Y APE+L Y
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAY 368
Query: 212 GTSIDVWSVGCIFAELL-GRKPI 233
+S D +S+GC+ +LL G P
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 82 V------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 83 CTRE-----PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 194
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 230
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNA-FENRVDALRTLRELKLLRHLQHENVIALKD 96
IGRG +G V +T + A+K ++ + + L E +L ++++ D
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML------SLVSTGD 249
Query: 97 ----VMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
V M + + +LM+ DLH + + +++ +++ GL+++H+
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 309
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+++RDLKP N+L++ + ++I D GLA + K + V T Y APE+L Y
Sbjct: 310 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAY 367
Query: 212 GTSIDVWSVGCIFAELL-GRKPI 233
+S D +S+GC+ +LL G P
Sbjct: 368 DSSADWFSLGCMLFKLLRGHSPF 390
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 82 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 83 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 194
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 230
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNA-FENRVDALRTLRELKLLRHLQHENVIALKD 96
IGRG +G V +T + A+K ++ + + L E +L ++++ D
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML------SLVSTGD 250
Query: 97 ----VMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
V M + + +LM+ DLH + + +++ +++ GL+++H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+++RDLKP N+L++ + ++I D GLA + K + V T Y APE+L Y
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAY 368
Query: 212 GTSIDVWSVGCIFAELL-GRKPI 233
+S D +S+GC+ +LL G P
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNA-FENRVDALRTLRELKLLRHLQHENVIALKD 96
IGRG +G V +T + A+K ++ + + L E +L ++++ D
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML------SLVSTGD 250
Query: 97 ----VMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHS 151
V M + + +LM+ DLH + + +++ +++ GL+++H+
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHN 310
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNY 211
+++RDLKP N+L++ + ++I D GLA + K + V T Y APE+L Y
Sbjct: 311 RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAY 368
Query: 212 GTSIDVWSVGCIFAELL-GRKPI 233
+S D +S+GC+ +LL G P
Sbjct: 369 DSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 82 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 193
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 229
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 82 V------SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 38 IGRGAYGIVCSSVNRETNEK--VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALK 95
+G G +G V V R ++ VAIK + E + D +RE +++ L + ++ L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 96 DVMMPSHRRNFKDVYLVYELMDTD-LHQ-IIKSSQALTNDHCQYFLFQLLRGLKYLHSAN 153
V + + LV E+ LH+ ++ + + + L Q+ G+KYL N
Sbjct: 403 GVC------QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDN 210
+HR+L N+L+ KI DFGL++ + + T +W + APE C N
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE----CIN 512
Query: 211 ---YGTSIDVWSVGCIFAELL--GRKP 232
+ + DVWS G E L G+KP
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 43/234 (18%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
KP+GRGA+G V + T VA+K + A + AL + ELK+L H+ H
Sbjct: 34 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL--MSELKILIHIGHH 91
Query: 90 -NVIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQAL 130
NV+ L K + ++ R+ ++ ++ Y+ + DL++ L
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPE-DLYK-----DFL 145
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM 190
T +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 191 TE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 206 RKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
I +G+G +G V C + T VA+K++ ++ ++ + RE+++L+ L +
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDF 73
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF--QLLRGLKY 148
++ + V R++ + LV E + + + D + L+ Q+ +G++Y
Sbjct: 74 IVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 130
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR--------WYR 200
L S +HRDL N+LV + +KI DFGLA+ +Y V R WY
Sbjct: 131 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP----LDKDYYVVREPGQSPIFWY- 185
Query: 201 APELLLCCDN-YGTSIDVWSVGCIFAELL 228
APE L DN + DVWS G + EL
Sbjct: 186 APESL--SDNIFSRQSDVWSFGVVLYELF 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 78 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
DVW+ G + E+ G P +PG +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGID 217
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 108/238 (45%), Gaps = 36/238 (15%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
I +G+G +G V C + T VA+K++ ++ ++ + RE+++L+ L +
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDF 72
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF--QLLRGLKY 148
++ + V R++ + LV E + + + D + L+ Q+ +G++Y
Sbjct: 73 IVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 129
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR--------WYR 200
L S +HRDL N+LV + +KI DFGLA+ +Y V R WY
Sbjct: 130 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP----LDKDYYVVREPGQSPIFWY- 184
Query: 201 APELLLCCDN-YGTSIDVWSVGCIFAELLG--RKPIFPGTECLNQLKLIINILGSRRE 255
APE L DN + DVWS G + EL K P E + ++GS R+
Sbjct: 185 APESL--SDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE-------FLRMMGSERD 233
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 80 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 191
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 227
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 82 V------SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 78 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
DVW+ G + E+ G P +PG +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGID 217
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 91 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 202
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 238
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 275 LGQGCFGEVWMGTWNGTT-RVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 331 V------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 384
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 442
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 443 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 478
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 80 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 191
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 227
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
I +G+G +G V C + T VA+K++ ++ ++ + RE+++L+ L +
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDF 85
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF--QLLRGLKY 148
++ + V R++ + LV E + + + D + L+ Q+ +G++Y
Sbjct: 86 IVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR--------WYR 200
L S +HRDL N+LV + +KI DFGLA+ +Y V R WY
Sbjct: 143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP----LDKDYYVVREPGQSPIFWY- 197
Query: 201 APELLLCCDN-YGTSIDVWSVGCIFAELL 228
APE L DN + DVWS G + EL
Sbjct: 198 APESL--SDNIFSRQSDVWSFGVVLYELF 224
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 82 V------SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 35/239 (14%)
Query: 5 VEPPNGIRSPGKHYYSMWQTLFEIDTKYVPIKP-IGRGAYGIVCSSVNRETNEKVAIKKI 63
+ N IR G+ S + +EI+ V + IG G++G V + V I K+
Sbjct: 13 TQEKNKIRPRGQRDSSYY---WEIEASEVMLSTRIGSGSFGTVYKG-KWHGDVAVKILKV 68
Query: 64 NNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQI 123
+ + A R E+ +LR +H N++ M KD + + Q
Sbjct: 69 VDPTPEQFQAFRN--EVAVLRKTRHVNILLFMGYMT-------KDNLAI-------VTQW 112
Query: 124 IKSSQALTNDHCQ---YFLFQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLK 173
+ S + H Q + +FQL+ +G+ YLH+ NI+HRD+K N+ ++ +K
Sbjct: 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVK 172
Query: 174 ICDFGLA--RTSNGKNQFMTEYVVTRWYRAPELLLCCDN--YGTSIDVWSVGCIFAELL 228
I DFGLA ++ +Q + + + + APE++ DN + DV+S G + EL+
Sbjct: 173 IGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM 231
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 98 MMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHR 157
Y+ Y + L + + + +T Y Q+ ++YL N +HR
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLREC--NREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNYGTS 214
DL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNTFSIK 211
Query: 215 IDVWSVGCIFAEL--LGRKPIFPGTE 238
DVW+ G + E+ G P +PG +
Sbjct: 212 SDVWAFGVLLWEIATYGMSP-YPGID 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 40/231 (17%)
Query: 36 KPIGRGAYGIVCSS----VNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHE-N 90
KP+GRGA+G V + +++ + K+ + + ELK+L H+ H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 VIAL------------------KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTN 132
V+ L K + ++ R+ ++ ++ Y+ + D LT
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF---------LTL 143
Query: 133 DHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KI DFGLAR ++ +
Sbjct: 144 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 193 ---YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ +W APE + Y DVWS G + E+ LG P +PG +
Sbjct: 204 GDARLPLKWM-APETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 251
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ ++HE ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 82 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G +G V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 76 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE-SLAYNKF 187
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
DVW+ G + E+ G P +PG +
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP-YPGID 215
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 248 V------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+ +F ++ APE L
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 354
Query: 208 CDNYGTSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + EL GR P +PG E L+Q++
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 395
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 82 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL N+LV N K+ DFGLAR N +W APE L +
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 248 V------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+ +F ++ APE L
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 354
Query: 208 CDNYGTSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + EL GR P +PG E L+Q++
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 395
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 19/237 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+KYL S
Sbjct: 96 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR K + +W L
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ--T 210
Query: 209 DNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 264
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 146/365 (40%), Gaps = 77/365 (21%)
Query: 28 IDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL- 86
+ +Y I+ +G G + V + + VA+K + +A AL ++ LK +R
Sbjct: 29 FNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESD 88
Query: 87 ----QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDL-HQIIKSS-QALTNDHCQYFLF 140
+ V+ L D S N V +V+E++ L IIKS+ Q L + +
Sbjct: 89 PSDPNKDMVVQLIDDFKIS-GMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIR 147
Query: 141 QLLRGLKYLHS-ANILHRDLKPGN------------------------------------ 163
Q+L+GL YLHS I+H D+KP N
Sbjct: 148 QVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTA 207
Query: 164 ----LLVN----ANCD---LKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
LLVN N D +KI D G + ++ TE + TR YR+ E+L+ Y
Sbjct: 208 PAADLLVNPLDPRNADKIRVKIADLG---NACWVHKHFTEDIQTRQYRSIEVLIGA-GYS 263
Query: 213 TSIDVWSVGCIFAELLGRKPIFPG------TECLNQLKLIINILGS-------RREEDLE 259
T D+WS C+ EL +F + + + II +LGS + E
Sbjct: 264 TPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSRE 323
Query: 260 FIDNPKARKYIKSL-PYTPGTPFSRLYPDAHPLA---IDLLQKMLVFDPTKRISVTEALQ 315
F + ++I L P++ Y H A D L ML P KR S E L+
Sbjct: 324 FFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLR 383
Query: 316 HPYMS 320
HP+++
Sbjct: 384 HPWLN 388
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 248 V------SEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 359
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 360 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 395
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + KVA+K + + A + +AL + ELK++ HL QH
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 101
Query: 89 ENVIAL-------KDVMMPSHRRNFKDVY-LVYELMDTDLHQIIKSSQALTNDHCQYFLF 140
EN++ L V++ + + D+ + + DL + + + L +F
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK--EDGRPLELRDLLHFSS 159
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE---YVVTR 197
Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ + + +
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
W APE + C Y DVWS G + E+ LG P +PG
Sbjct: 220 W-MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 257
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 285 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HR+L N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 396
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 432
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 45/247 (18%)
Query: 4 PVEPPNGIRSPGKHYYSMWQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKK 62
P+ N + G Y S +EID K + +K +G G +G+V R + VAIK
Sbjct: 2 PLGSKNAPSTAGLGYGS-----WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKM 55
Query: 63 INNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT---- 118
I E + + E K++ +L HE ++ L V + ++++ E M
Sbjct: 56 IK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ-----RPIFIITEYMANGCLL 107
Query: 119 ----DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKI 174
++ ++ Q L + C+ + ++YL S LHRDL N LVN +K+
Sbjct: 108 NYLREMRHRFQTQQLL--EMCK----DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 161
Query: 175 CDFGLAR-------TSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL 227
DFGL+R TS+ ++F RW +P +L + + D+W+ G + E+
Sbjct: 162 SDFGLSRYVLDDEETSSVGSKF-----PVRW--SPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 228 --LGRKP 232
LG+ P
Sbjct: 215 YSLGKMP 221
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 45/247 (18%)
Query: 4 PVEPPNGIRSPGKHYYSMWQTLFEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKK 62
P+ N + G Y S +EID K + +K +G G +G+V R + VAIK
Sbjct: 2 PLGSKNAPSTAGLGYGS-----WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKM 55
Query: 63 INNAFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT---- 118
I E + + E K++ +L HE ++ L V + ++++ E M
Sbjct: 56 IK---EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ-----RPIFIITEYMANGCLL 107
Query: 119 ----DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKI 174
++ ++ Q L + C+ + ++YL S LHRDL N LVN +K+
Sbjct: 108 NYLREMRHRFQTQQLL--EMCK----DVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 161
Query: 175 CDFGLAR-------TSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL 227
DFGL+R TS+ ++F RW +P +L + + D+W+ G + E+
Sbjct: 162 SDFGLSRYVLDDEYTSSVGSKF-----PVRW--SPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 228 --LGRKP 232
LG+ P
Sbjct: 215 YSLGKMP 221
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 27/221 (12%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + KVA+K + + A + +AL + ELK++ HL QH
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 109
Query: 89 ENVIAL-------KDVMMPSHRRNFKDVY-LVYELMDTDLHQIIKSSQALTNDHCQYFLF 140
EN++ L V++ + + D+ + + DL + + + L +F
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK--EDGRPLELRDLLHFSS 167
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE---YVVTR 197
Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ + + +
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
W APE + C Y DVWS G + E+ LG P +PG
Sbjct: 228 W-MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 265
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+K+L S
Sbjct: 156 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR K +F + + T +W L
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALESLQ-- 269
Query: 208 CDNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 324
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+K +G G +G V + KVA+K + + V A L E L++ LQH+ ++ L
Sbjct: 18 VKRLGAGQFGEVWMGYYNNST-KVAVKTLKPGTMS-VQAF--LEEANLMKTLQHDKLVRL 73
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHS 151
V+ +Y++ E M L +KS + + F Q+ G+ Y+
Sbjct: 74 YAVVTREE-----PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+ + KI DFGLAR E +W APE +
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPEAI---- 183
Query: 210 NYG---TSIDVWSVGCIFAELL--GRKPIFPG 236
N+G DVWS G + E++ G+ P +PG
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVTYGKIP-YPG 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ +V + ++ VA+K + ++A E + L + E+++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 98
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 99 KHKNIITLLGACTQDG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
+T +QL RG++YL S +HRDL N+LV N +KI DFGLAR N + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLK 244
T + + APE L D Y DVWS G + E+ LG P +PG K
Sbjct: 214 KKTTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFK 270
Query: 245 LI 246
L+
Sbjct: 271 LL 272
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 25/212 (11%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+K +G G +G V + KVA+K + + L E L++ LQH+ ++ L
Sbjct: 17 VKKLGAGQFGEVWMGYYNNST-KVAVKTLK---PGTMSVQAFLEEANLMKTLQHDKLVRL 72
Query: 95 KDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHS 151
V+ +Y++ E M L +KS + + F Q+ G+ Y+
Sbjct: 73 YAVVTKEE-----PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+ + KI DFGLAR E +W APE +
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPEAI---- 182
Query: 210 NYG---TSIDVWSVGCIFAELL--GRKPIFPG 236
N+G +VWS G + E++ G+ P +PG
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIP-YPG 213
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 103/220 (46%), Gaps = 25/220 (11%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQ-HENVI---A 93
+ G + V + + + + A+K++ + E + A+ ++E+ ++ L H N++ +
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI--IQEVCFMKKLSGHPNIVQFCS 93
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQA---LTNDHCQYFLFQLLRGLKYLH 150
+ + L+ EL L + +K ++ L+ D +Q R ++++H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 151 SAN--ILHRDLKPGNLLVNANCDLKICDFGLARTS--------NGKNQFMTEYVVTR--- 197
I+HRDLK NLL++ +K+CDFG A T + + + + E +TR
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 198 -WYRAPELLLCCDNY--GTSIDVWSVGCIFAELLGRKPIF 234
YR PE++ N+ G D+W++GCI L R+ F
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + H + S Q RG+ Y
Sbjct: 89 STAPQLAIVTQWCEGSSL-------------YHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 194
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILG 251
D+ Y DV++ G + EL+ G+ P +N II ++G
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPY----SNINNRDQIIEMVG 239
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 80 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF--MTEYVVTRWYRAPELLLCCDNYG 212
+HRDL N LV N +K+ DFGL+R G +W APE L + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPE-SLAYNKFS 192
Query: 213 TSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 227
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 79 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF--MTEYVVTRWYRAPELLLCCDNYG 212
+HRDL N LV N +K+ DFGL+R G +W APE L + +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPE-SLAYNKFS 191
Query: 213 TSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 226
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 16 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---TMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + + +V E M L +K + + L Q+ G+ Y+ N
Sbjct: 72 V------SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 125
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR N +W APE L +
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAAL-YGRFT 183
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 184 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 219
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+K+L S
Sbjct: 97 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR K +F + + T +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALESLQ-- 210
Query: 208 CDNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 265
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+K+L S
Sbjct: 102 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR K +F + + T +W L
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALESLQ-- 215
Query: 208 CDNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 270
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALR-TLRELKLLRHLQHENVIA 93
I+ +G+G++G V + +ET + A+K + + D + T+ E ++L ++ +
Sbjct: 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSA 152
+ R ++ V E ++ DL I+ S+ +++ +++ L +LH
Sbjct: 88 QLFCCFQTPDR----LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK 143
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
I++RDLK N+L++ K+ DFG+ + + T Y APE+L YG
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM-LYG 202
Query: 213 TSIDVWSVGCIFAELL-GRKPI 233
++D W++G + E+L G P
Sbjct: 203 PAVDWWAMGVLLYEMLCGHAPF 224
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 324 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HR+L N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 435
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 471
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 44/227 (19%)
Query: 26 FEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+EID K + +K +G G +G+V R + VAIK I E + + E K++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 59
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT--------DLHQIIKSSQAL--TNDH 134
+L HE ++ L V + ++++ E M ++ ++ Q L D
Sbjct: 60 NLSHEKLVQLYGVCTKQ-----RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 114
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKN 187
C+ ++YL S LHRDL N LVN +K+ DFGL+R TS+ +
Sbjct: 115 CE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGS 166
Query: 188 QFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKP 232
+F RW +P +L + + D+W+ G + E+ LG+ P
Sbjct: 167 KF-----PVRW--SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+K+L S
Sbjct: 95 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR K +F + + T +W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALESLQ-- 208
Query: 208 CDNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 263
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G+G +G V T +VAIK + + L+E ++++ L+HE ++ L V
Sbjct: 193 LGQGCFGEVWMGTWNGTT-RVAIKTLKPG---NMSPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 98 MMPSHRRNFKDVYLVYELMDT-DLHQIIKSSQA--LTNDHCQYFLFQLLRGLKYLHSANI 154
+ + + +Y+V E M L +K L Q+ G+ Y+ N
Sbjct: 249 V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 302
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR--TSNGKNQFMTEYVVTRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGL R N +W APE L +
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 360
Query: 213 TSIDVWSVGCIFAELL--GRKPIFPGT---ECLNQLK 244
DVWS G + EL GR P +PG E L+Q++
Sbjct: 361 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 396
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+K+L S
Sbjct: 97 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR K +F + + T +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALESLQ-- 210
Query: 208 CDNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 265
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 47/245 (19%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ ++ + ++ KVA+K + ++A E + L + E+++++ +
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 91
Query: 87 QHENVIALKD----------VMMPSHRRNFKDVYLVYE--LMDTDLHQIIKSSQALTNDH 134
+H+N+I L ++ + + N ++ E ++ + + L++
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------TSN 184
+Q+ RG++YL S +HRDL N+LV + +KI DFGLAR T+N
Sbjct: 152 LVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 185 GKNQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLN 241
G+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 212 GR-------LPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEE 260
Query: 242 QLKLI 246
KL+
Sbjct: 261 LFKLL 265
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+K+L S
Sbjct: 98 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR K +F + + T +W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK-EFDSVHNKTGAKLPVKWMALESLQ-- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 20 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + H + S Q RG+ Y
Sbjct: 77 STKPQLAIVTQWCEGSSL-------------YHHLHASETKFEMKKLIDIARQTARGMDY 123
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 124 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 182
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILG 251
D+ Y DV++ G + EL+ G+ P +N II ++G
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPY----SNINNRDQIIEMVG 227
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 119 DLHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDF 177
DL I AL + + F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 178 GLARTSNGKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL 228
G K+ T++ TR Y PE + +G S VWS+G + +++
Sbjct: 203 GSGALL--KDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 44/227 (19%)
Query: 26 FEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+EID K + +K +G G +G+V R + VAIK I E + + E K++
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 58
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT--------DLHQIIKSSQAL--TNDH 134
+L HE ++ L V + ++++ E M ++ ++ Q L D
Sbjct: 59 NLSHEKLVQLYGVCTKQ-----RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 113
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKN 187
C+ ++YL S LHRDL N LVN +K+ DFGL+R TS+ +
Sbjct: 114 CE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 165
Query: 188 QFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKP 232
+F RW +P +L + + D+W+ G + E+ LG+ P
Sbjct: 166 KF-----PVRW--SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G YG V V ++ + VA+K + E+ ++ L+E +++ ++H N++ L V
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 98 MMPSHRRNFKDVYLVYELMD-TDLHQIIK--SSQALTNDHCQYFLFQLLRGLKYLHSANI 154
Y++ E M +L ++ + Q + Y Q+ ++YL N
Sbjct: 282 CTRE-----PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY 211
+HR+L N LV N +K+ DFGL+R G T + ++ + APE L + +
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 393
Query: 212 GTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
DVW+ G + E+ G P +PG + +L+
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 429
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 44/227 (19%)
Query: 26 FEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+EID K + +K +G G +G+V R + VAIK I E + + E K++
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 65
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT--------DLHQIIKSSQAL--TNDH 134
+L HE ++ L V + ++++ E M ++ ++ Q L D
Sbjct: 66 NLSHEKLVQLYGVCTKQ-----RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 120
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKN 187
C+ ++YL S LHRDL N LVN +K+ DFGL+R TS+ +
Sbjct: 121 CE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 172
Query: 188 QFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKP 232
+F RW +P +L + + D+W+ G + E+ LG+ P
Sbjct: 173 KF-----PVRW--SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 73 STAPQLAIV---TQWCEGSSLYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 119
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 178
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELM 203
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 43/243 (17%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ +V + ++ VA+K + ++A E + L + E+++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 98
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 99 KHKNIIHLLGACTQDG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
+T +QL RG++YL S +HRDL N+LV N +KI DFGLAR N + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 190 ---MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQL 243
+ +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 214 KKTTNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELF 269
Query: 244 KLI 246
KL+
Sbjct: 270 KLL 272
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ +V + ++ VA+K + ++A E + L + E+++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDL--VSEMEMMKMIG 98
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 99 KHKNIINLLGACTQDG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
+T +QL RG++YL S +HRDL N+LV N +KI DFGLAR N + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLK 244
T + + APE L D Y DVWS G + E+ LG P +PG K
Sbjct: 214 KKTTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFK 270
Query: 245 LI 246
L+
Sbjct: 271 LL 272
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ +V + ++ VA+K + ++A E + L + E+++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 98
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 99 KHKNIINLLGACTQDG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
+T +QL RG++YL S +HRDL N+LV N +KI DFGLAR N + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY 213
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLK 244
T + + APE L D Y DVWS G + E+ LG P +PG K
Sbjct: 214 KNTTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFK 270
Query: 245 LI 246
L+
Sbjct: 271 LL 272
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%), Gaps = 37/240 (15%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ +V + ++ VA+K + ++A E + L + E+++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 98
Query: 87 QHENVIALKD----------VMMPSHRRNFKDVYLVYEL-----MDTDLHQIIKSSQALT 131
+H+N+I L ++ + + N ++ YL D++++ + +T
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLRE-YLRARRPPGMEYSYDINRV--PEEQMT 155
Query: 132 NDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF-- 189
+QL RG++YL S +HRDL N+LV N +KI DFGLAR N + +
Sbjct: 156 FKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 190 MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
T + + APE L D Y DVWS G + E+ LG P +PG KL+
Sbjct: 216 TTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 272
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 102/227 (44%), Gaps = 44/227 (19%)
Query: 26 FEIDTKYVP-IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLR 84
+EID K + +K +G G +G+V R + VAIK I E + + E K++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 59
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDT--------DLHQIIKSSQAL--TNDH 134
+L HE ++ L V + ++++ E M ++ ++ Q L D
Sbjct: 60 NLSHEKLVQLYGVCTKQ-----RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDV 114
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKN 187
C+ ++YL S LHRDL N LVN +K+ DFGL+R TS+ +
Sbjct: 115 CE--------AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS 166
Query: 188 QFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKP 232
+F RW +P +L + + D+W+ G + E+ LG+ P
Sbjct: 167 KF-----PVRW--SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 109 VYLVYELMDTDLHQIIKSSQALTND---HCQY----FLFQLLRGLKYLHSANILHRDLKP 161
+Y+ EL + +L +++S + +Y L Q+ G+ +LHS I+HRDLKP
Sbjct: 102 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKP 161
Query: 162 GNLLVNA-------------NCDLKICDFGLART-SNGKNQF---MTEYVVTRWYRAPEL 204
N+LV+ N + I DFGL + +G+ F + T +RAPEL
Sbjct: 162 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPEL 221
Query: 205 L--LCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
L SID++S+GC+F +L G+ P G + + +I I L+
Sbjct: 222 LEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF--GDKYSRESNIIRGIFS------LDE 273
Query: 261 IDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+ R I A DL+ +M+ DP KR + + L+HP
Sbjct: 274 MKCLHDRSLIAE-------------------ATDLISQMIDHDPLKRPTAMKVLRHPLFW 314
Query: 321 P 321
P
Sbjct: 315 P 315
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGIV--CSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVI 92
++ IG G +G+V +N++ KVAIK I + D + E +++ L H ++
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLV 65
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQAL-TNDHCQYFLFQLLRGLKYLH 150
L V + + LV+E M+ L +++ + L + + G+ YL
Sbjct: 66 QLYGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPE 203
A+++HRDL N LV N +K+ DFG+ R TS+ +F ++ +PE
Sbjct: 121 EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 174
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 175 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 43/243 (17%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ +V + ++ VA+K + ++A E + L + E+++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 98
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 99 KHKNIINLLGACTQDG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNG---K 186
+T +QL RG++YL S +HRDL N+LV N +KI DFGLAR N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 187 NQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQL 243
+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 214 KKTTNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELF 269
Query: 244 KLI 246
KL+
Sbjct: 270 KLL 272
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 103/241 (42%), Gaps = 55/241 (22%)
Query: 109 VYLVYELMDTDLHQIIKSSQALTND---HCQY----FLFQLLRGLKYLHSANILHRDLKP 161
+Y+ EL + +L +++S + +Y L Q+ G+ +LHS I+HRDLKP
Sbjct: 102 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKP 161
Query: 162 GNLLVNA-------------NCDLKICDFGLART-SNGKNQF---MTEYVVTRWYRAPEL 204
N+LV+ N + I DFGL + +G+ F + T +RAPEL
Sbjct: 162 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPEL 221
Query: 205 L--LCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSRREEDLEF 260
L SID++S+GC+F +L G+ P G + + +I I L+
Sbjct: 222 LEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF--GDKYSRESNIIRGIFS------LDE 273
Query: 261 IDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTEALQHPYMS 320
+ R I A DL+ +M+ DP KR + + L+HP
Sbjct: 274 MKCLHDRSLIAE-------------------ATDLISQMIDHDPLKRPTAMKVLRHPLFW 314
Query: 321 P 321
P
Sbjct: 315 P 315
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + H + S Q RG+ Y
Sbjct: 89 STKPQLAIVTQWCEGSSL-------------YHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 194
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL-GRKPIFPGTECLNQLKLIINILG 251
D+ Y DV++ G + EL+ G+ P +N II ++G
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPY----SNINNRDQIIEMVG 239
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 43/243 (17%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ +V + ++ VA+K + ++A E + L + E+++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 98
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 99 KHKNIINLLGACTQDG-----PLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNG---K 186
+T +QL RG++YL S +HRDL N+LV N +KI DFGLAR N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 187 NQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQL 243
+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 214 KKTTNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELF 269
Query: 244 KLI 246
KL+
Sbjct: 270 KLL 272
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 21/238 (8%)
Query: 38 IGRGAYGIVCSSVNRETNEK---VAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
IGRG +G V + + K A+K +N + + + L E +++ H NV++L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 95 KDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS-SQALTNDHCQYFLFQLLRGLKYLHSAN 153
+ + S V L Y + DL I++ + T F Q+ +G+K+L S
Sbjct: 98 LGICLRSEGSPL--VVLPY-MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR K +F + + T +W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDK-EFDSVHNKTGAKLPVKWMALESLQ-- 211
Query: 208 CDNYGTSIDVWSVGCIFAELLGR-KPIFPGTECLNQLKLIINILGSRREEDLEFIDNP 264
+ T DVWS G + EL+ R P +P +N + + +L RR E+ +P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLLQGRRLLQPEYCPDP 266
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF---MTEYVVT 196
+QL RG++YL S +HRDL N+LV N +KI DFGLAR N + + +
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 269
Query: 197 RWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
+W APE L D Y DVWS G + E+ LG P +PG KL+
Sbjct: 270 KWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 318
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 47/250 (18%)
Query: 36 KPIGRGAYGIVCSSVNRETNE-----KVAIKKIN-NAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V ++ ++ +VA+K + A + +AL + ELK++ L H
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREAL--MSELKMMTQLGSH 108
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSS-QALTNDHCQY--------- 137
EN++ L S +YL++E DL ++S + + D +Y
Sbjct: 109 ENIVNLLGACTLSG-----PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 138 -------------FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSN 184
F +Q+ +G+++L + +HRDL N+LV +KICDFGLAR
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 185 GKNQFMTE---YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPGTEC 239
+ ++ + +W APE L Y DVWS G + E+ LG P +PG
Sbjct: 224 SDSNYVVRGNARLPVKW-MAPESLF-EGIYTIKSDVWSYGILLWEIFSLGVNP-YPGIPV 280
Query: 240 -LNQLKLIIN 248
N KLI N
Sbjct: 281 DANFYKLIQN 290
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 39/241 (16%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ +V + ++ VA+K + ++A E + L + E+++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 98
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKS----------------SQAL 130
+H+N+I L + + ++ +V +L + +++ + +
Sbjct: 99 KHKNIINL----LGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 131 TNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF- 189
T +QL RG++YL S +HRDL N+LV N +KI DFGLAR N + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 190 -MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKL 245
T + + APE L D Y DVWS G + E+ LG P +PG KL
Sbjct: 215 KTTNGRLPVKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKL 271
Query: 246 I 246
+
Sbjct: 272 L 272
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 57/250 (22%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ ++ + ++ KVA+K + ++A E + L + E+++++ +
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 84
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 85 KHKNIINLLGACTQD-----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 139
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------- 181
L++ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 182 --TSNGKNQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
T+NG+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 200 KKTTNGR-------LPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG 248
Query: 237 TECLNQLKLI 246
KL+
Sbjct: 249 VPVEELFKLL 258
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + KVA+K + + A + +AL + ELK++ HL QH
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 109
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSS----------------QALTN 132
EN++ L Y Y DL ++ + L++
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCY----GDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 133 DHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE 192
+F Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ +
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 193 ---YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+ +W APE + C Y DVWS G + E+ LG P +PG
Sbjct: 226 GNARLPVKW-MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 271
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 57/250 (22%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ ++ + ++ KVA+K + ++A E + L + E+++++ +
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 132
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 133 KHKNIINLLGACTQD-----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------- 181
L++ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 182 --TSNGKNQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
T+NG+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 248 KKTTNGR-------LPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG 296
Query: 237 TECLNQLKLI 246
KL+
Sbjct: 297 VPVEELFKLL 306
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 57/250 (22%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ ++ + ++ KVA+K + ++A E + L + E+++++ +
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 91
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 92 KHKNIINLLGACTQD-----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 146
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------- 181
L++ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 182 --TSNGKNQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
T+NG+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 207 KKTTNGR-------LPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG 255
Query: 237 TECLNQLKLI 246
KL+
Sbjct: 256 VPVEELFKLL 265
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 36 KPIGRGAYGIVCSS-----VNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + + VA+K + +A +AL + ELK+L +L H
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL--MSELKVLSYLGNH 109
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVY-ELMD-----TDLHQIIKSSQALTNDHCQY----- 137
N++ L Y Y +L++ D K+S A+ D
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 138 ---FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-- 192
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + ++ +
Sbjct: 170 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 229
Query: 193 -YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+ +W APE + C Y DVWS G EL LG P +PG
Sbjct: 230 ARLPVKW-MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP-YPG 273
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 57/250 (22%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ ++ + ++ KVA+K + ++A E + L + E+++++ +
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 91
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 92 KHKNIINLLGACTQD-----GPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ 146
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------- 181
L++ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 182 --TSNGKNQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
T+NG+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 207 KKTTNGR-------LPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG 255
Query: 237 TECLNQLKLI 246
KL+
Sbjct: 256 VPVEELFKLL 265
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 78 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 124
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 183
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELM 208
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 36 KPIGRGAYGIVCSS-----VNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + + VA+K + +A +AL + ELK+L +L H
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL--MSELKVLSYLGNH 104
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVY-ELMD-----TDLHQIIKSSQALTNDHCQY----- 137
N++ L Y Y +L++ D K+S A+ D
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 138 ---FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-- 192
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + ++ +
Sbjct: 165 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 224
Query: 193 -YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+ +W APE + C Y DVWS G EL LG P +PG
Sbjct: 225 ARLPVKW-MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP-YPG 268
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 18 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 75 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 121
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 122 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 180
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELM 205
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 73 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 119
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 178
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELM 203
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 57/250 (22%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ ++ + ++ KVA+K + ++A E + L + E+++++ +
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 91
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 92 KHKNIINLLGACTQD-----GPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 146
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------- 181
L++ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 182 --TSNGKNQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
T+NG+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 207 KKTTNGR-------LPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG 255
Query: 237 TECLNQLKLI 246
KL+
Sbjct: 256 VPVEELFKLL 265
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 36 KPIGRGAYGIVCSS-----VNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + + VA+K + +A +AL + ELK+L +L H
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL--MSELKVLSYLGNH 86
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVY-ELMD-----TDLHQIIKSSQALTNDHCQY----- 137
N++ L Y Y +L++ D K+S A+ D
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 138 ---FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-- 192
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + ++ +
Sbjct: 147 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 206
Query: 193 -YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+ +W APE + C Y DVWS G EL LG P +PG
Sbjct: 207 ARLPVKW-MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP-YPG 250
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 36 KPIGRGAYGIVCSS-----VNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + + VA+K + +A +AL + ELK+L +L H
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL--MSELKVLSYLGNH 102
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVY-ELMD-----TDLHQIIKSSQALTNDHCQY----- 137
N++ L Y Y +L++ D K+S A+ D
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 138 ---FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-- 192
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + ++ +
Sbjct: 163 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGN 222
Query: 193 -YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+ +W APE + C Y DVWS G EL LG P +PG
Sbjct: 223 ARLPVKW-MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP-YPG 266
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 114/245 (46%), Gaps = 45/245 (18%)
Query: 36 KPIGRGAYGIV----CSSVNRETNEK--VAIKKINN-AFENRVDALRTLRELKLLRHLQH 88
+ +G GA+G V C +++ T +K VA+K + + R D RE +LL +LQH
Sbjct: 21 RELGEGAFGKVFLAECYNLS-PTKDKMLVAVKALKDPTLAARKD---FQREAELLTNLQH 76
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKS-------------SQA---LT 131
E+++ V + + +V+E M DL++ +++ QA L
Sbjct: 77 EHIVKFYGVC-----GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 132 NDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMT 191
+ Q+ G+ YL S + +HRDL N LV AN +KI DFG++R + +
Sbjct: 132 LSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 192 ---EYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGT-----ECLN 241
+ RW PE ++ + T DVWS G I E+ G++P F + EC+
Sbjct: 192 GGHTMLPIRWM-PPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT 249
Query: 242 QLKLI 246
Q +++
Sbjct: 250 QGRVL 254
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 57/250 (22%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ ++ + ++ KVA+K + ++A E + L + E+++++ +
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 80
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 81 KHKNIINLLGACTQD-----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 135
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------- 181
L++ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 182 --TSNGKNQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
T+NG+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 196 KKTTNGR-------LPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG 244
Query: 237 TECLNQLKLI 246
KL+
Sbjct: 245 VPVEELFKLL 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF--MTEYVVTR 197
+QL RG++YL S +HRDL N+LV N +KI DFGLAR N + + T +
Sbjct: 153 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 212
Query: 198 WYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
+ APE L D Y DVWS G + E+ LG P +PG KL+
Sbjct: 213 KWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 261
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF--MTEYVVTR 197
+QL RG++YL S +HRDL N+LV N +KI DFGLAR N + + T +
Sbjct: 156 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 215
Query: 198 WYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
+ APE L D Y DVWS G + E+ LG P +PG KL+
Sbjct: 216 KWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 264
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 78 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 124
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 183
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELM 208
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 10/107 (9%)
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR 197
+ FQ+ RG+++L S +HRDL N+L++ N +KICDFGLAR KN TR
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIY-KNPDYVRKGDTR 262
Query: 198 W---YRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ APE + D Y T DVWS G + E+ LG P +PG +
Sbjct: 263 LPLKWMAPESIF--DKIYSTKSDVWSYGVLLWEIFSLGGSP-YPGVQ 306
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 43/243 (17%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ +V + ++ VA+K + ++A E + L + E+++++ +
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDL--VSEMEMMKMIG 98
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 99 KHKNIINLLGACTQDG-----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
+T +QL RG++YL S +HRDL N+LV N ++I DFGLAR N + +
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYY 213
Query: 190 ---MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQL 243
+ +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 214 KKTTNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELF 269
Query: 244 KLI 246
KL+
Sbjct: 270 KLL 272
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 57/250 (22%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ ++ + ++ KVA+K + ++A E + L + E+++++ +
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 83
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 84 KHKNIINLLGACTQD-----GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 138
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------- 181
L++ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 182 --TSNGKNQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
T+NG+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 199 KKTTNGR-------LPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG 247
Query: 237 TECLNQLKLI 246
KL+
Sbjct: 248 VPVEELFKLL 257
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 8/112 (7%)
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF--MTEYVVTR 197
+QL RG++YL S +HRDL N+LV N +KI DFGLAR N + + T +
Sbjct: 151 YQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 210
Query: 198 WYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLI 246
+ APE L D Y DVWS G + E+ LG P +PG KL+
Sbjct: 211 KWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 259
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 36 KPIGRGAYGIVCSS-----VNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + + VA+K + +A +AL + ELK+L +L H
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREAL--MSELKVLSYLGNH 109
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVY-ELMD-----TDLHQIIKSSQALTNDHCQY----- 137
N++ L Y Y +L++ D K+S A+ D
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 138 ---FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE-- 192
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + ++ +
Sbjct: 170 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 193 -YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+ +W APE + C Y DVWS G EL LG P +PG
Sbjct: 230 ARLPVKW-MAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSP-YPG 273
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 117/250 (46%), Gaps = 57/250 (22%)
Query: 36 KPIGRGAYG--IVCSSVNRETNE-----KVAIKKI-NNAFENRVDALRTLRELKLLRHL- 86
KP+G GA+G ++ ++ + ++ KVA+K + ++A E + L + E+++++ +
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDL--ISEMEMMKMIG 76
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMDT-DLHQIIKS----------------SQA 129
+H+N+I L +Y++ E +L + +++ +
Sbjct: 77 KHKNIINLLGACTQD-----GPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 131
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------- 181
L++ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 182 --TSNGKNQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
T+NG+ + +W APE L D Y DVWS G + E+ LG P +PG
Sbjct: 192 KKTTNGR-------LPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPG 240
Query: 237 TECLNQLKLI 246
KL+
Sbjct: 241 VPVEELFKLL 250
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 73 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 119
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 178
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELM 203
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 38 IGRGAYGIVCSS-VNRETNEKVAIKKINNAFENRVDALRTL--RELKLLRHLQHENVIAL 94
+G G +G+V VN N VA+KK+ + + L+ +E+K++ QHEN++ L
Sbjct: 39 MGEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 95 KDVMMPSHRRNFKDVYLVY------ELMDT----------DLHQIIKSSQALTNDHCQYF 138
+ D+ LVY L+D H K +Q N
Sbjct: 96 -----LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN------ 144
Query: 139 LFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSN--GKNQFMTEYVVT 196
G+ +LH + +HRD+K N+L++ KI DFGLAR S + + V T
Sbjct: 145 ------GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGT 198
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKP 232
Y APE L D++S G + E++ P
Sbjct: 199 TAYMAPEALR--GEITPKSDIYSFGVVLLEIITGLP 232
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 43/217 (19%)
Query: 35 IKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+K +G G +G+V R + VAIK I E + + E K++ +L HE ++ L
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 95 KDVMMPSHRRNFKDVYLVYELMDT--------DLHQIIKSSQAL--TNDHCQYFLFQLLR 144
V + ++++ E M ++ ++ Q L D C+
Sbjct: 65 YGVCTKQ-----RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCE-------- 111
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTR 197
++YL S LHRDL N LVN +K+ DFGL+R TS+ ++F R
Sbjct: 112 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-----PVR 166
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKP 232
W +P +L + + D+W+ G + E+ LG+ P
Sbjct: 167 W--SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 43 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 100 STKPQLAIVTQWCEGSS---LYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 146
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 147 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 205
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELM 230
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 101 STKPQLAIVTQWCEGSS---LYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 147
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 206
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELM 231
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGIV--CSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVI 92
++ IG G +G+V +N++ KVAIK I + D + E +++ L H ++
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLV 68
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQAL-TNDHCQYFLFQLLRGLKYLH 150
L V + + LV+E M+ L +++ + L + + G+ YL
Sbjct: 69 QLYGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 123
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPE 203
A ++HRDL N LV N +K+ DFG+ R TS+ +F ++ +PE
Sbjct: 124 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 177
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 178 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 206
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGIV--CSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVI 92
++ IG G +G+V +N++ KVAIK I + D + E +++ L H ++
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLV 65
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQAL-TNDHCQYFLFQLLRGLKYLH 150
L V + + LV+E M+ L +++ + L + + G+ YL
Sbjct: 66 QLYGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPE 203
A ++HRDL N LV N +K+ DFG+ R TS+ +F ++ +PE
Sbjct: 121 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 174
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 175 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGIV--CSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVI 92
++ IG G +G+V +N++ KVAIK I + D + E +++ L H ++
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLV 63
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQAL-TNDHCQYFLFQLLRGLKYLH 150
L V + + LV+E M+ L +++ + L + + G+ YL
Sbjct: 64 QLYGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPE 203
A ++HRDL N LV N +K+ DFG+ R TS+ +F ++ +PE
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 172
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 173 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 201
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 35 IKPIGRGAYGIVC----SSVNRETNEKVAIK--KINNAFENRVDALRTLRELKLLRHLQH 88
I+ +G G +G V N T E VA+K K + ++R +E+ +LR L H
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG---WKQEIDILRTLYH 75
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF--QLLRGL 146
E++I K ++ + V + Y + + + + S L Q LF Q+ G+
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLV-MEYVPLGSLRDYLPRHSIGLA----QLLLFAQQICEGM 130
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR-------WY 199
YLHS + +HR+L N+L++ + +KI DFGLA+ +++ Y V WY
Sbjct: 131 AYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY---YRVREDGDSPVFWY 187
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELL 228
APE L Y S DVWS G ELL
Sbjct: 188 -APECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 36 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 93 STKPQLAIVTQWCEGSS---LYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 139
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 140 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 198
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELM 223
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKIN---------NAFENRVDALRTLRELKLLRHLQH 88
IG G++G V + + VA+K +N AF+N V LR R + +L + +
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKY 148
L V + +Y +++T I A Q +G+ Y
Sbjct: 101 STKPQLAIVTQWCEGSS---LYHHLHIIETKFEMIKLIDIAR----------QTAQGMDY 147
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---NGKNQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA +G +QF W APE++
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 206
Query: 206 LCCDN--YGTSIDVWSVGCIFAELL 228
D Y DV++ G + EL+
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELM 231
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 27/209 (12%)
Query: 35 IKPIGRGAYGIVCSSVNRETN-EKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIA 93
++ IG G +G+V + N +KVAIK I + D + E +++ L H ++
Sbjct: 32 VQEIGSGQFGLV--HLGYWLNKDKVAIKTIKEGSMSEDD---FIEEAEVMMKLSHPKLVQ 86
Query: 94 LKDVMMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQAL-TNDHCQYFLFQLLRGLKYLHS 151
L V + + LV+E M+ L +++ + L + + G+ YL
Sbjct: 87 LYGVCLEQ-----APICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 141
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPEL 204
A ++HRDL N LV N +K+ DFG+ R TS+ +F ++ +PE
Sbjct: 142 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE- 194
Query: 205 LLCCDNYGTSIDVWSVGCIFAELLGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 195 VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 223
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 92/216 (42%), Gaps = 43/216 (19%)
Query: 38 IGRGAYGIVCSS-VNRETNEKVAIKKINNAFENRVDALRTL--RELKLLRHLQHENVIAL 94
+G G +G+V VN N VA+KK+ + + L+ +E+K++ QHEN++ L
Sbjct: 33 MGEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 95 KDVMMPSHRRNFKDVYLVY------ELMDT----------DLHQIIKSSQALTNDHCQYF 138
+ D+ LVY L+D H K +Q N
Sbjct: 90 -----LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN------ 138
Query: 139 LFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM--TEYVVT 196
G+ +LH + +HRD+K N+L++ KI DFGLAR S Q + V T
Sbjct: 139 ------GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGT 192
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKP 232
Y APE L D++S G + E++ P
Sbjct: 193 TAYMAPEALR--GEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 26/225 (11%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTNDHC 135
L E ++ + + +V L + + S + + L+D H+ SQ L N
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLN--- 121
Query: 136 QYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY-- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 122 --WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYHA 176
Query: 194 ----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 177 EGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 35 IKPIGRGAYGIVC----SSVNRETNEKVAIKKIN-NAFENRVDALRTLRELKLLRHLQHE 89
I+ +G G +G V N T E VA+K + +A + +E+ +LR L HE
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWK--QEIDILRTLYHE 93
Query: 90 NVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF--QLLRGLK 147
++I K + + + V + Y + + + + S L Q LF Q+ G+
Sbjct: 94 HIIKYKGCCEDAGAASLQLV-MEYVPLGSLRDYLPRHSIGLA----QLLLFAQQICEGMA 148
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SNGKNQFMTEY---VVTRWYRAPE 203
YLH+ + +HRDL N+L++ + +KI DFGLA+ G + WY APE
Sbjct: 149 YLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APE 207
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELL 228
L Y S DVWS G ELL
Sbjct: 208 CLKEYKFYYAS-DVWSFGVTLYELL 231
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 43/216 (19%)
Query: 38 IGRGAYGIVCSS-VNRETNEKVAIKKINNAFENRVDALRTL--RELKLLRHLQHENVIAL 94
+G G +G+V VN N VA+KK+ + + L+ +E+K++ QHEN++ L
Sbjct: 39 MGEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 95 KDVMMPSHRRNFKDVYLVY------ELMDT----------DLHQIIKSSQALTNDHCQYF 138
+ D+ LVY L+D H K +Q N
Sbjct: 96 -----LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAAN------ 144
Query: 139 LFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSN--GKNQFMTEYVVT 196
G+ +LH + +HRD+K N+L++ KI DFGLAR S + V T
Sbjct: 145 ------GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGT 198
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKP 232
Y APE L D++S G + E++ P
Sbjct: 199 TAYMAPEALR--GEITPKSDIYSFGVVLLEIITGLP 232
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 35 IKPIGRGAYGIV--C--SSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
I +G+G +G V C + T VA+K++ ++ ++ + RE+++L+ L +
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDF 69
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF--QLLRGLKY 148
++ + V R + LV E + + + D + L+ Q+ +G++Y
Sbjct: 70 IVKYRGVSYGPGRPELR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 126
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR--------WYR 200
L S +HRDL N+LV + +KI DFGLA+ + V R WY
Sbjct: 127 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLP----LDKDXXVVREPGQSPIFWY- 181
Query: 201 APELLLCCDN-YGTSIDVWSVGCIFAELL 228
APE L DN + DVWS G + EL
Sbjct: 182 APESL--SDNIFSRQSDVWSFGVVLYELF 208
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 26/225 (11%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 7 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 65
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTNDHC 135
L E ++ + + +V L + + S + + L+D H+ SQ L N
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLN--- 122
Query: 136 QYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY-- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 123 --WCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYHA 177
Query: 194 ----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 178 EGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 10 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 68
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 122
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 123 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 179
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 180 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 67
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 121
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 178
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 7 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 65
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 119
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 120 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 176
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 177 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 28/209 (13%)
Query: 35 IKPIGRGAYGIVC----SSVNRETNEKVAIK--KINNAFENRVDALRTLRELKLLRHLQH 88
I+ +G G +G V N T E VA+K K + ++R +E+ +LR L H
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSG---WKQEIDILRTLYH 75
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF--QLLRGL 146
E++I K ++ + V + Y + + + + S L Q LF Q+ G+
Sbjct: 76 EHIIKYKGCCEDQGEKSLQLV-MEYVPLGSLRDYLPRHSIGLA----QLLLFAQQICEGM 130
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTR-------WY 199
YLH+ + +HR+L N+L++ + +KI DFGLA+ +++ Y V WY
Sbjct: 131 AYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY---YRVREDGDSPVFWY 187
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAELL 228
APE L Y S DVWS G ELL
Sbjct: 188 -APECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 28/237 (11%)
Query: 10 GIRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINN 65
GIRS ++ + L E T++ IK +G GA+G V + EKV AIK++
Sbjct: 4 GIRSGEAPNQALLRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 66 AFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQI 123
A + + L E ++ + + +V L + + S V L+ +LM L +
Sbjct: 62 ATSPKANK-EILDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYV 114
Query: 124 IKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTS 183
+ + + + + Q+ +G+ YL ++HRDL N+LV +KI DFGLA+
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 184 NGKNQFMTEY------VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
+ + EY V +W +L Y DVWS G EL+ G KP
Sbjct: 175 GAEEK---EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 67
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 178
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 12 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 70
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 71 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 124
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 125 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 181
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 182 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 21/223 (9%)
Query: 28 IDTK-YVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHL 86
ID K Y+ I+ +G G + V A+K+I + D RE + R
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI--LCHEQQDREEAQREADMHRLF 83
Query: 87 QHENVIALKDVMMPSHRRNFKDVYLVYELMD-----TDLHQIIKSSQALTNDHCQYFLFQ 141
H N++ L + R + +L+ ++ ++ LT D + L
Sbjct: 84 NHPNILRLVAYCL-RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTS----NGKNQFMT--EYVV 195
+ RGL+ +H+ HRDLKP N+L+ + D G + G Q +T ++
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 196 TRW---YRAPELLLCCDN--YGTSIDVWSVGCI-FAELLGRKP 232
R YRAPEL + DVWS+GC+ +A + G P
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 31 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 89
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 90 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 143
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 144 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 200
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 201 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 67
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 178
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 67
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 178
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 16 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 74
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 75 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 128
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 129 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 185
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 186 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 38 IGRGAYGIVCSSVNRETNEKV--AIKKINNAFENRVDALRTLRELKLLRHLQHE-NVIAL 94
IG G +G V + ++ ++ AIK++ + ++ D EL++L L H N+I L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 95 KDVMMPSHRR------------NFKDVYLVYELMDTDLHQIIKSSQA--LTNDHCQYFLF 140
+ HR N D +++TD I +S A L++ +F
Sbjct: 82 --LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
+ RG+ YL +HRDL N+LV N KI DFGL+R + + RW
Sbjct: 140 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 199
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPGTEC 239
L Y T+ DVWS G + E+ LG P + G C
Sbjct: 200 IESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTP-YCGMTC 237
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 38 IGRGAYGIVCSSVNRETNEKV--AIKKINNAFENRVDALRTLRELKLLRHLQHE-NVIAL 94
IG G +G V + ++ ++ AIK++ + ++ D EL++L L H N+I L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 95 KDVMMPSHRR------------NFKDVYLVYELMDTDLHQIIKSSQA--LTNDHCQYFLF 140
+ HR N D +++TD I +S A L++ +F
Sbjct: 92 --LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
+ RG+ YL +HRDL N+LV N KI DFGL+R + + RW
Sbjct: 150 DVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 209
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPGTEC 239
L Y T+ DVWS G + E+ LG P + G C
Sbjct: 210 IESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTP-YCGMTC 247
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 176 AEGGKVPIKWMALESIL--HRIYTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIALKDV 97
+G G G V R+T +A+K++ + N+ + R L +L DV
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKEENKRILMDL---------------DV 76
Query: 98 MMPSHRRNF-----------KDVYLVYELMDTDLHQIIKSSQA-LTNDHCQYFLFQLLRG 145
++ SH + DV++ ELM T ++ K Q + +++
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 146 LKYLHSA-NILHRDLKPGNLLVNANCDLKICDFGLA-RTSNGKNQFMTEYVVTRWYRAPE 203
L YL ++HRD+KP N+L++ +K+CDFG++ R + K + + Y APE
Sbjct: 137 LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA--YMAPE 194
Query: 204 LLLCCD----NYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINIL 250
+ D +Y DVWS+G EL + FP C +++ +L
Sbjct: 195 RIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FPYKNCKTDFEVLTKVL 243
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 43/215 (20%)
Query: 39 GRGAYGIVCSS-VNRETNEKVAIKKINNAFENRVDALRTL--RELKLLRHLQHENVIALK 95
G G +G+V VN N VA+KK+ + + L+ +E+K+ QHEN++ L
Sbjct: 31 GEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL- 86
Query: 96 DVMMPSHRRNFKDVYLVY------ELMDT----------DLHQIIKSSQALTNDHCQYFL 139
+ D+ LVY L+D H K +Q N
Sbjct: 87 ----LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAAN------- 135
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFM--TEYVVTR 197
G+ +LH + +HRD+K N+L++ KI DFGLAR S Q + + V T
Sbjct: 136 -----GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTT 190
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKP 232
Y APE L D++S G + E++ P
Sbjct: 191 AYXAPEALR--GEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGIV--CSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHENVI 92
++ IG G +G+V +N++ KVAIK I + D + E +++ L H ++
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIREGAMSEED---FIEEAEVMMKLSHPKLV 66
Query: 93 ALKDVMMPSHRRNFKDVYLVYELMDTD-LHQIIKSSQAL-TNDHCQYFLFQLLRGLKYLH 150
L V + + LV E M+ L +++ + L + + G+ YL
Sbjct: 67 QLYGVCLEQ-----APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 121
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSNGKNQFMTEYVVTRWYRAPE 203
A ++HRDL N LV N +K+ DFG+ R TS+ +F ++ +PE
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 175
Query: 204 LLLCCDNYGTSIDVWSVGCIFAELLGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 176 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRTLRELKLLR 84
+T++ IK +G GA+G V + EKV AIK++ A + + L E ++
Sbjct: 8 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMA 66
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDHCQYFLFQL 142
+ + +V L + + S V L+ +LM L + + + + + + Q+
Sbjct: 67 SVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY------VVT 196
+G+ YL ++HRDL N+LV +KI DFGLA+ + + EY V
Sbjct: 121 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYHAEGGKVPI 177
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
+W +L Y DVWS G EL+ G KP
Sbjct: 178 KWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 88/194 (45%), Gaps = 45/194 (23%)
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMT--- 191
C + Q+ +++LHS ++HRDLKP N+ + +K+ DFGL + + T
Sbjct: 166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 192 ---------EYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQ 242
V T+ Y +PE + +NY +D++S+G I ELL + + + +
Sbjct: 226 PMPAYATHXGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFELL-----YSFSTQMER 279
Query: 243 LKLIINILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVF 302
+++I ++ +L+F P F++ YP H ++Q ML
Sbjct: 280 VRIITDV------RNLKF-------------PLL----FTQKYPQEHM----MVQDMLSP 312
Query: 303 DPTKRISVTEALQH 316
PT+R T+ +++
Sbjct: 313 SPTERPEATDIIEN 326
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 30 TKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDAL-RTLRELKLLRHLQH 88
T + PI+ +GRG +G+V + N+ + AIK+I NR A + +RE+K L L+H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAKLEH 63
Query: 89 ENVI 92
++
Sbjct: 64 PGIV 67
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 36/232 (15%)
Query: 36 KPIGRGAYGIVCSSV-----NRETNEKVAIKKI-NNAFENRVDALRTLRELKLLRHL-QH 88
K +G GA+G V + + KVA+K + + A + +AL + ELK++ HL QH
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 94
Query: 89 ENVIALKDVMMPSHRRNFKDVYLVY----ELMDTDLHQIIKSSQALTND----------- 133
EN++ L Y Y + ++ S A D
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 134 ----HCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
+F Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + +
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 190 MTE---YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+ + + +W APE + C Y DVWS G + E+ LG P +PG
Sbjct: 215 IVKGNARLPVKWM-APESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 263
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRTLRELKLLR 84
+T++ IK +G GA+G V + EKV AIK++ A + + L E ++
Sbjct: 11 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMA 69
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDHCQYFLFQL 142
+ + +V L + + S V L+ +LM L + + + + + + Q+
Sbjct: 70 SVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 123
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY------VVT 196
G+ YL ++HRDL N+LV +KI DFGLA+ + + EY V
Sbjct: 124 AEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYHAEGGKVPI 180
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
+W +L Y DVWS G EL+ G KP
Sbjct: 181 KWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 54/299 (18%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 8 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 66
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQY 137
+R H +++ L V+ + V+++ EL Q+ K S L +
Sbjct: 67 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKYSLDLAS--LIL 118
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVV 195
+ +QL L YL S +HRD+ N+LV++N +K+ DFGL+R + +
Sbjct: 119 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 178
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSR 253
+W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 179 IKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER 233
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 234 -------------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 264
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 54/299 (18%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 33 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 91
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQY 137
+R H +++ L V+ + V+++ EL Q+ K S L +
Sbjct: 92 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKYSLDLAS--LIL 143
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVV 195
+ +QL L YL S +HRD+ N+LV++N +K+ DFGL+R + +
Sbjct: 144 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 203
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSR 253
+W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 204 IKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER 258
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 259 -------------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 289
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 54/299 (18%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 60
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQY 137
+R H +++ L V+ + V+++ EL Q+ K S L +
Sbjct: 61 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKYSLDLAS--LIL 112
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVV 195
+ +QL L YL S +HRD+ N+LV++N +K+ DFGL+R + +
Sbjct: 113 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSR 253
+W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 173 IKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER 227
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 228 -------------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 258
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 54/299 (18%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEAL 63
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQY 137
+R H +++ L V+ + V+++ EL Q+ K S L +
Sbjct: 64 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKYSLDLAS--LIL 115
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVV 195
+ +QL L YL S +HRD+ N+LV++N +K+ DFGL+R + +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSR 253
+W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 176 IKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER 230
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 231 -------------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 261
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 120/297 (40%), Gaps = 50/297 (16%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEAL 443
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF- 140
+R H +++ L V+ + V+++ EL + + + D L+
Sbjct: 444 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 141 -QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVVTR 197
QL L YL S +HRD+ N+LV++N +K+ DFGL+R + + +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSRRE 255
W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 558 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER-- 610
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 611 -----------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 641
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ + + EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 54/299 (18%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 65
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQY 137
+R H +++ L V+ + V+++ EL Q+ K S L +
Sbjct: 66 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKYSLDLAS--LIL 117
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVV 195
+ +QL L YL S +HRD+ N+LV++N +K+ DFGL+R + +
Sbjct: 118 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 177
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSR 253
+W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 178 IKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER 232
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 233 -------------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 263
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 10 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 68
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 122
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ + + EY
Sbjct: 123 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 179
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 180 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 54/299 (18%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 68
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQY 137
+R H +++ L V+ + V+++ EL Q+ K S L +
Sbjct: 69 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKYSLDLAS--LIL 120
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVV 195
+ +QL L YL S +HRD+ N+LV++N +K+ DFGL+R + +
Sbjct: 121 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 180
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSR 253
+W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 181 IKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER 235
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 236 -------------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 266
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 122/299 (40%), Gaps = 54/299 (18%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 63
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMD----TDLHQIIKSSQALTNDHCQY 137
+R H +++ L V+ + V+++ EL Q+ K S L +
Sbjct: 64 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKYSLDLAS--LIL 115
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVV 195
+ +QL L YL S +HRD+ N+LV++N +K+ DFGL+R + +
Sbjct: 116 YAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSR 253
+W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 176 IKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER 230
Query: 254 REEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 231 -------------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 261
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ + + EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
LT +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 190 MTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 255 VRKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 305
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 10 GIRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINN 65
GIRS ++ + L E T++ IK + GA+G V + EKV AIK++
Sbjct: 4 GIRSGEAPNQALLRILKE--TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 66 AFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQI 123
A + + L E ++ + + +V L + + S V L+ +LM L +
Sbjct: 62 ATSPKANK-EILDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYV 114
Query: 124 IKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTS 183
+ + + + + Q+ +G+ YL ++HRDL N+LV +KI DFGLA+
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 184 NGKNQFMTEY------VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
+ + EY V +W +L Y DVWS G EL+ G KP
Sbjct: 175 GAEEK---EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 38 IGRGAYGIVCSSVNRETNEKV--AIKKINNAFENRVDALRTLRELKLLRHLQHE-NVIAL 94
IG G +G V + ++ ++ AIK++ + ++ D EL++L L H N+I L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 95 KDVMMPSHRR------------NFKDVYLVYELMDTDLHQIIKSSQA--LTNDHCQYFLF 140
+ HR N D +++TD I +S A L++ +F
Sbjct: 89 --LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYR 200
+ RG+ YL +HR+L N+LV N KI DFGL+R + + RW
Sbjct: 147 DVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMA 206
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPGTEC 239
L Y T+ DVWS G + E+ LG P + G C
Sbjct: 207 IESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTP-YCGMTC 244
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 128 QALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKN 187
+ALT F +Q+ +G++YL ++HRDL N+LV +KI DFGL+R ++
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 188 QFMTEYVVTRWYRAPELLLCCDN-----YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
YV R P + ++ Y T DVWS G + E+ LG P +PG
Sbjct: 205 S----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
LT +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 190 MTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 257 VRKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 307
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ + + EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
LT +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 190 MTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 250 VRKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 300
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 10 GIRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINN 65
GIRS ++ + L E T++ IK +G GA+G V + EKV AIK++
Sbjct: 4 GIRSGEAPNQALLRILKE--TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 66 AFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQI 123
A + + L E ++ + + +V L + + S V L+ +LM L +
Sbjct: 62 ATSPKANK-EILDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYV 114
Query: 124 IKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTS 183
+ + + + + Q+ +G+ YL ++HRDL N+LV +KI DFG A+
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 174
Query: 184 NGKNQFMTEY------VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
+ + EY V +W +L Y DVWS G EL+ G KP
Sbjct: 175 GAEEK---EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 130 LTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQF 189
LT +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 190 MTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPGTE 238
+ + + +W APE + D Y DVWS G + E+ LG P +PG +
Sbjct: 248 VRKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 298
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AI ++ A + +
Sbjct: 40 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANK-EI 98
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 99 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 152
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 153 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 209
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 210 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ A + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ + + EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 10 GIRSPGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINN 65
GIRS ++ + L E T++ IK + GA+G V + EKV AIK++
Sbjct: 4 GIRSGEAPNQALLRILKE--TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELRE 61
Query: 66 AFENRVDALRTLRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQI 123
A + + L E ++ + + +V L + + S V L+ +LM L +
Sbjct: 62 ATSPKANK-EILDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYV 114
Query: 124 IKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTS 183
+ + + + + Q+ +G+ YL ++HRDL N+LV +KI DFGLA+
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
Query: 184 NGKNQFMTEY------VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
+ + EY V +W +L Y DVWS G EL+ G KP
Sbjct: 175 GAEEK---EYHAEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 38 IGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELKLLRHLQHENVIAL 94
+G+G +G V + ++ + KVA+K + D LRE ++ H +V L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 95 KDVMMPSHRRNFKDVYLVYE--LMDTDLHQIIKSSQALTN------DHCQYFLFQLLRGL 146
V + S + + +V + DLH + +S+ N F+ + G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR---TSNGKNQFMTEYVVTRWYRAPE 203
+YL S N +HRDL N ++ + + + DFGL+R + + Q + +W
Sbjct: 151 EYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALES 210
Query: 204 LLLCCDN-YGTSIDVWSVGCIFAELLGR 230
L DN Y DVW+ G E++ R
Sbjct: 211 L---ADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRT 76
Q L I +T++ IK + GA+G V + EKV AIK++ A + +
Sbjct: 6 QALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELKLLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTD--LHQIIKSSQALTNDH 134
L E ++ + + +V L + + S V L+ +LM L + + + + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ + + EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKP 232
V +W +L Y DVWS G EL+ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 122/304 (40%), Gaps = 64/304 (21%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEAL 63
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF- 140
+R H +++ L V+ + V+++ EL + + + D L+
Sbjct: 64 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 141 -QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR---------TSNGKNQFM 190
QL L YL S +HRD+ N+LV++N +K+ DFGL+R S GK
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK---- 173
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIIN 248
+ +W APE + + ++ DVW G E+L G KP F G + + + I N
Sbjct: 174 ---LPIKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN 227
Query: 249 ILGSRREEDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRI 308
G R LP P P P L+ K +DP++R
Sbjct: 228 --GER-------------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRP 257
Query: 309 SVTE 312
TE
Sbjct: 258 RFTE 261
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 119/297 (40%), Gaps = 50/297 (16%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEAL 63
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF- 140
+R H +++ L V+ + V+++ EL + + + D L+
Sbjct: 64 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 141 -QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVVTR 197
QL L YL S +HRD+ N+LV+A +K+ DFGL+R + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSRRE 255
W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 178 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER-- 230
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 231 -----------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 261
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 119/297 (40%), Gaps = 50/297 (16%)
Query: 26 FEIDTKYVPI-KPIGRGAYGIVCSSVNRETNE---KVAIKKINNAFENRVDALRTLRELK 81
+EI + + + + IG G +G V + VAIK N + V + L+E
Sbjct: 385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEAL 443
Query: 82 LLRHLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDLHQIIKSSQALTNDHCQYFLF- 140
+R H +++ L V+ + V+++ EL + + + D L+
Sbjct: 444 TMRQFDHPHIVKLIGVITEN------PVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 497
Query: 141 -QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTE--YVVTR 197
QL L YL S +HRD+ N+LV+A +K+ DFGL+R + + +
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIFPGTECLNQLKLIINILGSRRE 255
W APE + + ++ DVW G E+L G KP F G + + + I N G R
Sbjct: 558 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRIEN--GER-- 610
Query: 256 EDLEFIDNPKARKYIKSLPYTPGTPFSRLYPDAHPLAIDLLQKMLVFDPTKRISVTE 312
LP P P P L+ K +DP++R TE
Sbjct: 611 -----------------LPMPPNCP---------PTLYSLMTKCWAYDPSRRPRFTE 641
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 42/226 (18%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRTLRELKLLR 84
+T+ +K +G GA+G V + E V AIK +N + + + + E ++
Sbjct: 37 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-VEFMDEALIMA 95
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDL-------HQIIKSSQALTNDHCQY 137
+ H +++ L V + + LV +LM H+ SQ L N
Sbjct: 96 SMDHPHLVRLLGVCLSP------TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----- 144
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY---- 193
+ Q+ +G+ YL ++HRDL N+LV + +KI DFGLAR G + EY
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK---EYNADG 201
Query: 194 --VVTRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKP 232
+ +W + L C +Y DVWS G EL+ G KP
Sbjct: 202 GKMPIKW-----MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRH--LQHENVIALK 95
+G+G YG V + E VA+K F +R D RE +L L+HEN++
Sbjct: 16 VGKGRYGEVWRGSWQ--GENVAVK----IFSSR-DEKSWFRETELYNTVMLRHENILGFI 68
Query: 96 DVMMPSHRRNFKDVYLV--YELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH--- 150
M S R + ++L+ Y M + L+ ++ + L C + + GL +LH
Sbjct: 69 ASDMTS-RHSSTQLWLITHYHEMGS-LYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 151 -----SANILHRDLKPGNLLVNANCDLKICDFGLA----RTSNGKNQFMTEYVVTRWYRA 201
I HRDLK N+LV N I D GLA +++N + V T+ Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 202 PELL------LCCDNYGTSIDVWSVGCIFAELLGR 230
PE+L C D+Y +D+W+ G + E+ R
Sbjct: 186 PEVLDETIQVDCFDSY-KRVDIWAFGLVLWEVARR 219
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRH--LQHENVIALK 95
+G+G YG V + E VA+K F +R D RE +L L+HEN++
Sbjct: 16 VGKGRYGEVWRGSWQ--GENVAVK----IFSSR-DEKSWFRETELYNTVMLRHENILGFI 68
Query: 96 DVMMPSHRRNFKDVYLV--YELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH--- 150
M S R + ++L+ Y M + L+ ++ + L C + + GL +LH
Sbjct: 69 ASDMTS-RHSSTQLWLITHYHEMGS-LYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 151 -----SANILHRDLKPGNLLVNANCDLKICDFGLA----RTSNGKNQFMTEYVVTRWYRA 201
I HRDLK N+LV N I D GLA +++N + V T+ Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 202 PELL------LCCDNYGTSIDVWSVGCIFAELLGR 230
PE+L C D+Y +D+W+ G + E+ R
Sbjct: 186 PEVLDETIQVDCFDSY-KRVDIWAFGLVLWEVARR 219
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 42/226 (18%)
Query: 29 DTKYVPIKPIGRGAYGIVCSSVNRETNEKV----AIKKINNAFENRVDALRTLRELKLLR 84
+T+ +K +G GA+G V + E V AIK +N + + + + E ++
Sbjct: 14 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-VEFMDEALIMA 72
Query: 85 HLQHENVIALKDVMMPSHRRNFKDVYLVYELMDTDL-------HQIIKSSQALTNDHCQY 137
+ H +++ L V + + LV +LM H+ SQ L N
Sbjct: 73 SMDHPHLVRLLGVCLSP------TIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----- 121
Query: 138 FLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY---- 193
+ Q+ +G+ YL ++HRDL N+LV + +KI DFGLAR G + EY
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK---EYNADG 178
Query: 194 --VVTRWYRAPELLLCCDNYGT---SIDVWSVGCIFAELL--GRKP 232
+ +W + L C +Y DVWS G EL+ G KP
Sbjct: 179 GKMPIKW-----MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 33/215 (15%)
Query: 38 IGRGAYGIVCSSVNRETNEKVAIKKINNAFENRVDALRTLRELKLLRH--LQHENVIALK 95
+G+G YG V + E VA+K F +R D RE +L L+HEN++
Sbjct: 45 VGKGRYGEVWRGSWQ--GENVAVK----IFSSR-DEKSWFRETELYNTVMLRHENILGFI 97
Query: 96 DVMMPSHRRNFKDVYLV--YELMDTDLHQIIKSSQALTNDHCQYFLFQLLRGLKYLH--- 150
M S R + ++L+ Y M + L+ ++ + L C + + GL +LH
Sbjct: 98 ASDMTS-RHSSTQLWLITHYHEMGS-LYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 151 -----SANILHRDLKPGNLLVNANCDLKICDFGLA----RTSNGKNQFMTEYVVTRWYRA 201
I HRDLK N+LV N I D GLA +++N + V T+ Y A
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 202 PELL------LCCDNYGTSIDVWSVGCIFAELLGR 230
PE+L C D+Y +D+W+ G + E+ R
Sbjct: 215 PEVLDETIQVDCFDSY-KRVDIWAFGLVLWEVARR 248
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 38 IGRGAYGIV----CSSVNRETNEK-VAIKKINNAFENRVDALRTLRELKLLRHLQHENVI 92
+G GA+G V C ++ E ++ VA+K + A E+ + RE +LL LQH++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLTMLQHQHIV 106
Query: 93 ALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQA---------------LTNDHCQ 136
V + + +V+E M DL++ ++S L
Sbjct: 107 RFFGVCTEG-----RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 137 YFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMT---EY 193
Q+ G+ YL + +HRDL N LV +KI DFG++R + +
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF 234
+ RW PE +L + T DVWS G + E+ G++P +
Sbjct: 222 LPIRWM-PPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 40/236 (16%)
Query: 38 IGRGAYGIV----CSSVNRETNEK-VAIKKINNAFENRVDALRTLRELKLLRHLQHENVI 92
+G GA+G V C ++ E ++ VA+K + A E+ + RE +LL LQH++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLTMLQHQHIV 83
Query: 93 ALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQA---------------LTNDHCQ 136
V + + +V+E M DL++ ++S L
Sbjct: 84 RFFGVCTEG-----RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 137 YFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMT---EY 193
Q+ G+ YL + +HRDL N LV +KI DFG++R + +
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF-----PGTECLNQ 242
+ RW PE +L + T DVWS G + E+ G++P + +C+ Q
Sbjct: 199 LPIRWM-PPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 252
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 102/236 (43%), Gaps = 40/236 (16%)
Query: 38 IGRGAYGIV----CSSVNRETNEK-VAIKKINNAFENRVDALRTLRELKLLRHLQHENVI 92
+G GA+G V C ++ E ++ VA+K + A E+ + RE +LL LQH++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLTMLQHQHIV 77
Query: 93 ALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKSSQA---------------LTNDHCQ 136
V + + +V+E M DL++ ++S L
Sbjct: 78 RFFGVCTEG-----RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 137 YFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMT---EY 193
Q+ G+ YL + +HRDL N LV +KI DFG++R + +
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELL--GRKPIF-----PGTECLNQ 242
+ RW PE +L + T DVWS G + E+ G++P + +C+ Q
Sbjct: 193 LPIRWM-PPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ 246
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 128 QALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKN 187
+ALT F +Q+ +G++YL +++HRDL N+LV +KI DFGL+R ++
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 188 QFMTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+ + +W L D+ Y T DVWS G + E+ LG P +PG
Sbjct: 205 SXVKRSQGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 36 KPIGRGAYGIVCSSVNR-----ETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+ +G+G++G+V V + E +VAIK +N A R + + L E +++ +
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHH 89
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQ-ALTND---------HCQYFL 139
V+ L V+ + ++ ELM DL ++S + A+ N+
Sbjct: 90 VVRLLGVVSQG-----QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY------ 193
++ G+ YL++ +HRDL N +V + +KI DFG+ R + + T+Y
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGK 199
Query: 194 --VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL 227
+ RW +PE L + T DVWS G + E+
Sbjct: 200 GLLPVRWM-SPE-SLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 36 KPIGRGAYGIVCSSVNRE---TNEKVAIK--KINNAFENRVDALRTLRELKLLRHLQHEN 90
K +G G +G V ++ T+ KVA+K K++N+ + ++ L E ++ H N
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEF--LSEAACMKDFSHPN 97
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQALTN------DHCQYFLFQLL 143
VI L V + + ++ M DLH + S+ T F+ +
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 144 RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVV---TRWYR 200
G++YL + N LHRDL N ++ + + + DFGL++ + + + +W
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 201 APELLLCCDN-YGTSIDVWSVGCIFAELLGRKPI-FPGTE 238
L D Y + DVW+ G E+ R +PG +
Sbjct: 218 IESL---ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 128 QALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKN 187
+ALT F +Q+ +G++YL ++HRDL N+LV +KI DFGL+R ++
Sbjct: 145 RALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 188 QFMTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEL--LGRKPIFPG 236
+ + +W L D+ Y T DVWS G + E+ LG P +PG
Sbjct: 205 SXVKRSQGRIPVKWMAIESLF---DHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + + Q+ G+KYL +N +HRDL N+L+
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 505
Query: 170 CDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ + +W + APE C NY + DVWS G +
Sbjct: 506 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 561
Query: 224 FAELL--GRKP 232
E G+KP
Sbjct: 562 MWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + + Q+ G+KYL +N +HRDL N+L+
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 506
Query: 170 CDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ + +W + APE C NY + DVWS G +
Sbjct: 507 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 562
Query: 224 FAELL--GRKP 232
E G+KP
Sbjct: 563 MWEAFSYGQKP 573
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 120 LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L++ ++ ++ + + + + Q+ G+KYL +N +HRDL N+L+ KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 180 ARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCIFAELL--GRK 231
++ + +W + APE C NY + DVWS G + E G+K
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
Query: 232 P 232
P
Sbjct: 230 P 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
Query: 120 LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L++ ++ ++ + + + + Q+ G+KYL +N +HRDL N+L+ KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 180 ARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCIFAELL--GRK 231
++ + +W + APE C NY + DVWS G + E G+K
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
Query: 232 P 232
P
Sbjct: 230 P 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + + Q+ G+KYL +N +HRDL N+L+
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 161
Query: 170 CDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ + +W + APE C NY + DVWS G +
Sbjct: 162 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 217
Query: 224 FAELL--GRKP 232
E G+KP
Sbjct: 218 MWEAFSYGQKP 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 36 KPIGRGAYGIVCSSVNR-----ETNEKVAIKKINNAFENRVDALRTLRELKLLRHLQHEN 90
+ +G+G++G+V V + E +VAIK +N A R + + L E +++ +
Sbjct: 21 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHH 79
Query: 91 VIALKDVMMPSHRRNFKDVYLVYELMD-TDLHQIIKSSQ-ALTND---------HCQYFL 139
V+ L V+ + ++ ELM DL ++S + A+ N+
Sbjct: 80 VVRLLGVVSQG-----QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 134
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEY------ 193
++ G+ YL++ +HRDL N +V + +KI DFG+ R + + T+Y
Sbjct: 135 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR-----DIYETDYYRKGGK 189
Query: 194 --VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL 227
+ RW +PE L + T DVWS G + E+
Sbjct: 190 GLLPVRWM-SPE-SLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQALTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + + Q+ G+KYL +N +HRDL N+L+
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 153
Query: 170 CDLKICDFGLARTSNGKNQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ + +W + APE C NY + DVWS G +
Sbjct: 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 209
Query: 224 FAELL--GRKP 232
E G+KP
Sbjct: 210 MWEAFSYGQKP 220
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 30/239 (12%)
Query: 31 KYVPIKPIGRGAYGIVCSSVNR-----ETNEKVAIKKINNAFENRVDALRTLRELKLLRH 85
K ++ +G+G++G+V R E +VA+K +N + R + + L E +++
Sbjct: 15 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKG 73
Query: 86 LQHENVIALKDVMMPSHRRNFKDVYLVYELM-DTDLHQIIKS--SQALTN--------DH 134
+V+ L V+ + +V ELM DL ++S +A N
Sbjct: 74 FTCHHVVRLLGVVSKG-----QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 128
Query: 135 CQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR---TSNGKNQFMT 191
++ G+ YL++ +HRDL N +V + +KI DFG+ R ++ +
Sbjct: 129 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 188
Query: 192 EYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEL--LGRKPIFPGTECLNQLKLIIN 248
+ RW APE L + TS D+WS G + E+ L +P + G LK +++
Sbjct: 189 GLLPVRWM-APE-SLKDGVFTTSSDMWSFGVVLWEITSLAEQP-YQGLSNEQVLKFVMD 244
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,858,560
Number of Sequences: 62578
Number of extensions: 495003
Number of successful extensions: 4277
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 1101
Number of HSP's gapped (non-prelim): 1293
length of query: 373
length of database: 14,973,337
effective HSP length: 100
effective length of query: 273
effective length of database: 8,715,537
effective search space: 2379341601
effective search space used: 2379341601
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)