Query 017359
Match_columns 373
No_of_seqs 219 out of 678
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 13:08:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017359.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017359hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ayu_A Nucleosome assembly pro 100.0 1.6E-90 5.5E-95 698.7 13.3 280 20-307 61-369 (417)
2 3fs3_A Nucleosome assembly pro 100.0 2.1E-73 7.3E-78 562.3 18.9 266 24-308 20-299 (359)
3 2zd7_A VPS75, vacuolar protein 100.0 3.1E-61 1.1E-65 461.5 10.8 203 56-305 9-223 (264)
4 2e50_A Protein SET; histone ch 100.0 8.7E-60 3E-64 442.1 17.9 208 36-299 13-221 (225)
5 3kyp_A Pfnaps, nucleosome asse 100.0 2.4E-56 8.2E-61 410.1 12.7 188 55-302 2-192 (193)
6 2jo8_A Serine/threonine-protei 93.5 0.32 1.1E-05 35.2 7.2 44 41-93 4-47 (51)
7 2ca6_A RAN GTPase-activating p 91.9 0.038 1.3E-06 53.0 0.8 7 130-136 181-187 (386)
8 2ayu_A Nucleosome assembly pro 85.7 0.29 9.9E-06 49.4 2.0 54 25-79 77-131 (417)
9 2zd7_A VPS75, vacuolar protein 73.6 0.82 2.8E-05 43.3 0.6 45 49-93 9-53 (264)
10 2p2u_A HOST-nuclease inhibitor 70.2 16 0.00056 32.0 8.2 49 51-99 18-66 (171)
11 4fp9_B Mterf domain-containing 61.2 1.7 5.9E-05 42.3 0.0 10 239-248 241-250 (335)
12 2ke4_A CDC42-interacting prote 58.2 25 0.00085 28.3 6.4 49 41-96 5-53 (98)
13 2jee_A YIIU; FTSZ, septum, coi 49.0 71 0.0024 24.9 7.4 52 40-91 4-65 (81)
14 2byk_A Chrac-16; nucleosome sl 39.7 7.4 0.00025 33.4 0.5 10 288-297 93-102 (140)
15 4afl_A P29ING4, inhibitor of g 34.4 52 0.0018 26.0 4.8 30 42-71 11-40 (104)
16 3g9g_A Suppressor of yeast pro 32.3 94 0.0032 29.5 6.9 47 43-93 35-86 (287)
17 2eln_A Zinc finger protein 406 30.9 19 0.00066 23.3 1.4 13 360-372 2-14 (38)
18 3a7p_A Autophagy protein 16; c 30.0 2.1E+02 0.0071 24.8 8.1 52 44-95 84-138 (152)
19 2zqm_A Prefoldin beta subunit 29.3 1.1E+02 0.0036 24.2 5.9 28 45-72 2-29 (117)
20 1fio_A SSO1 protein; four heli 25.1 3.2E+02 0.011 23.2 10.1 69 28-100 46-124 (196)
21 3bhp_A UPF0291 protein YNZC; N 24.9 88 0.003 23.1 4.1 42 47-89 2-43 (60)
22 2lh0_A Histone chaperone RTT10 21.2 56 0.0019 24.8 2.5 22 43-64 8-29 (70)
23 1fv5_A First zinc finger of U- 21.2 37 0.0013 21.8 1.3 12 361-372 2-13 (36)
No 1
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=100.00 E-value=1.6e-90 Score=698.65 Aligned_cols=280 Identities=37% Similarity=0.678 Sum_probs=236.5
Q ss_pred ccchhHHHHHHHHHhhhhcCCchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 017359 20 GARADLVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVN 99 (373)
Q Consensus 20 ~~~~~~~~~l~~~l~~l~~~~s~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~ 99 (373)
.+||+|+++|++||++|+|++++||++||+.||+||.+|+.||.++..|+++|++++++||+||+++|+|||++|++||+
T Consensus 61 ~~~p~~~~~~~~~l~~l~~~~~~~i~sLp~~v~~rI~aLk~lQ~e~~~le~ef~~ev~eLE~Ky~~~~~PLy~KR~eII~ 140 (417)
T 2ayu_A 61 ANQPLLLQSIQDRLGSLVGQDSGYVGGLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIIS 140 (417)
T ss_dssp ---------CCSTTTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHHhhccccchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcccccchhh--------------------hhhhhhccCCCcchHHHHhhchhhhhhcchhhHHhhccccccEEE
Q 017359 100 GVVEGAPNEVAMDQE--------------------EDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWF 159 (373)
Q Consensus 100 G~~e~~~~E~~~~~~--------------------~~~~~~~kgIP~FWltaL~N~~~ls~~I~e~De~iLk~L~DI~v~ 159 (373)
|.++|+.+|+.+... ......++|||+||+|||+||+.|+.||+++|++||+||+||+|+
T Consensus 141 G~~ept~eE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kgIP~FWltalkN~~~lse~I~e~De~iLk~L~DI~Ve 220 (417)
T 2ayu_A 141 GQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEVLEYLQDIGLE 220 (417)
T ss_dssp TSSCCCHHHHHHHHHHHHHTTCGGGCCSSCC---------CCSSCTTHHHHHHHTSTTGGGTCCHHHHTGGGGEEEEECC
T ss_pred CCCCCchhhhcccccccchhhhhhhhhhhhhhcccccccccccCCccHHHHHHHcChHHHHhhhhhhHHHHhhccceEEE
Confidence 999999766532110 111234689999999999999999999999999999999999999
Q ss_pred EeCC-CCceEEEEEe--CCCCCcccceeeeEEeeccC----CCcceecccceeeeecC-CCCcchhhhhccCC-CCCCCC
Q 017359 160 RIDD-PKGFKLEFYF--DPNPYFKNSVLTKTYHMIDE----DEPILEKAIGTEIEWYP-GKCLTQKLLKKKPK-KGSKNA 230 (373)
Q Consensus 160 ~~ed-~~gF~L~F~F--~~NpYF~N~vLtKty~l~~~----~dp~~~~~~gt~I~WK~-GKnlT~k~~kKk~k-kg~k~~ 230 (373)
++.+ ++||+|+||| .+||||+|++|||+|+|... |.+++.+++||+|+||+ |||||+++++|||| |+++++
T Consensus 221 ~~~d~~~gF~L~F~F~~~~NpYF~N~vLtKtY~~~~e~~~~g~~~~~~~egt~I~WK~~GknlT~k~~kkKqr~K~~~~~ 300 (417)
T 2ayu_A 221 YLTDGRPGFKLLFRFDSSANPFFTNDILCKTYFYQKELGYSGDFIYDHAEGCEISWKDNAHNVTVDLEMRKQRNKTTKQV 300 (417)
T ss_dssp BCCSSSCEEEEEEEECTTTCSSBCCSEEEEEEEEESSCCSSSSCEEEEEEECCCCBSCTTTCTTEEEEECCC--------
T ss_pred EccCCCcceEEEEEeCCCCCccccCCeEEEEEEEeccCCCCCCcccccccCcceeeecCCCCcchhhhhhcccccCCCcc
Confidence 9875 6699999999 99999999999999999754 34556689999999999 99999999998876 678889
Q ss_pred cccccccccccccccccccCCCCCCCCCChhhHHHHHHhhhccccchhHHhhhhhhcccccccchhhhccccccccc
Q 017359 231 KPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQDYDIGSIALCRSTIRDKIIPHAVSWFTGEAIQEEE 307 (373)
Q Consensus 231 r~v~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D~eig~~~~~~~~ikd~IiP~AV~yftGea~~~dd 307 (373)
|+|++++++.||||||+||.+|++++ +++..++++++|+.||+||+ +||++|||+||.||||+|++.++
T Consensus 301 R~v~k~v~~~SFFnfFspp~~p~~de--de~~~ee~e~~l~~DfeIG~------~Ikd~IiP~AV~yftGea~~~e~ 369 (417)
T 2ayu_A 301 RTIEKITPIESFFNFFDPPKIQNEDQ--DEELEEDLEERLALDYSIGE------QLKDKLIPRAVDWFTGAALEFEF 369 (417)
T ss_dssp -CCEEEEECCCGGGGGSCSCSCCCTT--SSSTTHHHHHHHHHHHHHHH------HHHHTTTTTHHHHHHSHHHHHHH
T ss_pred cccccCCCCCCceeecCCCCCCCccc--cccchHHHHHHHHHHHHHHH------HHHhhccccHHHHhccccccccc
Confidence 99999999999999999999998753 22334568899999999999 99999999999999999999865
No 2
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=100.00 E-value=2.1e-73 Score=562.26 Aligned_cols=266 Identities=36% Similarity=0.612 Sum_probs=189.3
Q ss_pred hHHHHHHHHHhhhhcCC----chhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 017359 24 DLVGVLKNKLQNLAGQH----SDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVN 99 (373)
Q Consensus 24 ~~~~~l~~~l~~l~~~~----s~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~ 99 (373)
.+|.+++..+.+|..++ .++|++||+.||+||.+|+.||.++..|+++|++++++||+||+++|+|||+||++||+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~m~sLp~~v~~rI~aLk~lQ~E~~~le~ef~eEv~~LE~KY~kl~qPLyeKR~eII~ 99 (359)
T 3fs3_A 20 SLLESIKIGKTSLKYRCFYLYDDKMTDLTEEQKETLKKLKLYQKEYYDYESKFEYELFLLRQKYHDLYGPIYDKRREALV 99 (359)
T ss_dssp -------------------------CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchhhccccchhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHc
Confidence 46777888889999999 99999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCcccccchhhhhhhhhccCCCcchHHHHhhchhhhhhcchhhHHhhccccccEEEEeC----CCCceEEEEEeCC
Q 017359 100 GVVEGAPNEVAMDQEEDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRID----DPKGFKLEFYFDP 175 (373)
Q Consensus 100 G~~e~~~~E~~~~~~~~~~~~~kgIP~FWltaL~N~~~ls~~I~e~De~iLk~L~DI~v~~~e----d~~gF~L~F~F~~ 175 (373)
|..+.. ..++|||+||++||+||+.|+.+|+++|+++|+||+||+|+++. .++||+|+|+|.+
T Consensus 100 G~~e~e-------------~~~kgIP~FWltvl~Nhp~ls~~I~e~De~iL~yL~DI~Ve~l~~~~~~~~gfkI~F~F~e 166 (359)
T 3fs3_A 100 GNGEAK-------------IGTPNLPEFWLRALRNNNTVSHVIEDHDEEILVYLNDIRCDYIKKNKEKKEGFILSFYFAT 166 (359)
T ss_dssp C---CC-------------SSSTTSTTHHHHHHHTSHHHHTTCCHHHHHHHTTEEEEEEEECC-------CEEEEEEECS
T ss_pred Cccccc-------------cccCCCCcHHHHHHHhchHHHHhccHhHHHHHhhcceeEEEEeccCCCCCCceEEEEEeCC
Confidence 975431 23479999999999999999999999999999999999999863 4679999999999
Q ss_pred CCCcccceeeeEEeecc---CCCcceecccceeeeecCCCCcchhhhhccCC-CCCCCCcccccccccccccccccccCC
Q 017359 176 NPYFKNSVLTKTYHMID---EDEPILEKAIGTEIEWYPGKCLTQKLLKKKPK-KGSKNAKPITKTEECESFFNFFNPPQV 251 (373)
Q Consensus 176 NpYF~N~vLtKty~l~~---~~dp~~~~~~gt~I~WK~GKnlT~k~~kKk~k-kg~k~~r~v~k~~~~~SFFnfF~~~~~ 251 (373)
||||+|++|||+|+|.. .++|++.+++||+|+||+|||||+++++||+| |+++.+|+|+++++++||||||+||.+
T Consensus 167 NpYF~N~vLtKey~l~~~~~~~dp~~~~se~t~I~WK~GKdlT~k~~~kKqr~K~t~~~R~v~k~~~~eSFFnfFspp~~ 246 (359)
T 3fs3_A 167 NPFFSNSVLTKTYHMKCVDCDNEPVLLHTEATVIDWYDNKNILKKNVVKKQHNKNSREVKTVQQTVNRDSFFHFFTSHKV 246 (359)
T ss_dssp CSSBCCSEEEEEEEEC--------CEEEEEECCCCBCTTCCTTCC----------------------CCCGGGGSCCBCC
T ss_pred CCcccCCEEEEEEEEeccCCCCCcccccceeeeeeEeCCCccchhhhhhhccccCCCCceeeeccCCCCCceeeCCCCCC
Confidence 99999999999999974 34687778999999999999999999888766 667889999999999999999999999
Q ss_pred CCCCC--CCChhhHHHHHHhhhccccchhHHhhhhhhcccccccchhhhcccccccccc
Q 017359 252 PEDDE--DIDEDTAEELQNQMEQDYDIGSIALCRSTIRDKIIPHAVSWFTGEAIQEEEI 308 (373)
Q Consensus 252 p~~~~--~~dee~~eel~~~l~~D~eig~~~~~~~~ikd~IiP~AV~yftGea~~~dd~ 308 (373)
|++++ +++++++++++++|+.||+||+ +||++|||+||.||||+|+++++.
T Consensus 247 p~~de~~~~de~~~~~~e~~l~~DfeIGe------~Ikd~IiP~av~yftGea~e~e~~ 299 (359)
T 3fs3_A 247 PNSNVIKQLSKHEVAQLEMIIEGDYEVAL------TIKERIIPYAVDYYLGIIIESESN 299 (359)
T ss_dssp ------------CHHHHHHHHHHHHHHHH------HHHHTHHHHHHHHHTTCC------
T ss_pred CCcccccccchhhhHHHHHHHHHhHHHHH------HHHhceecChHHhhCCcccccccC
Confidence 98664 3455667889999999999999 999999999999999999988643
No 3
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=100.00 E-value=3.1e-61 Score=461.54 Aligned_cols=203 Identities=18% Similarity=0.301 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccccCCcccccchhhhhhhhhccCCCcchHHHHhhc
Q 017359 56 EVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVAMDQEEDKATEEKGVPDFWLTAMKNN 135 (373)
Q Consensus 56 ~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~G~~e~~~~E~~~~~~~~~~~~~kgIP~FWltaL~N~ 135 (373)
..|+.++.++..|+++|.++.++|+++|.++|+|||+||++|| +|||+||++||+||
T Consensus 9 ~~l~~~~~~l~~lq~e~~~~~~ele~ky~~~~~Ply~kR~eII-----------------------~~IP~FWltal~n~ 65 (264)
T 2zd7_A 9 NEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYI-----------------------DEIAEFWKIVLSQH 65 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------TTCTTHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH-----------------------hcchhHHHHHHHcC
Confidence 5688899999999999999999999999999999999999999 79999999999999
Q ss_pred hhhhhhcchhhHHhhccccccEEEEe------CCCCceEEEEEeCC-CCCcccceeeeEEeeccC--C-Ccceeccccee
Q 017359 136 DVLSEEITERDEGALKFLKDIKWFRI------DDPKGFKLEFYFDP-NPYFKNSVLTKTYHMIDE--D-EPILEKAIGTE 205 (373)
Q Consensus 136 ~~ls~~I~e~De~iLk~L~DI~v~~~------ed~~gF~L~F~F~~-NpYF~N~vLtKty~l~~~--~-dp~~~~~~gt~ 205 (373)
+.|+.+|+++|++||+||+||+|+++ +.++||+|+|+|++ ||||+|++|||+|+|... | .+.+.+|+||+
T Consensus 66 ~~l~~~I~e~De~iL~~L~dI~v~~~~~~~~~~~~~gf~i~F~F~~~NpyF~N~vLtK~y~~~~~~dg~~~~~~~s~~t~ 145 (264)
T 2zd7_A 66 VSFANYIRASDFKYIDTIDKIKVEWLALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIKKGKDDQEDGILTSEPVP 145 (264)
T ss_dssp TTGGGGSCGGGHHHHTTEEEEEEEEGGGTCTTSCTTCEEEEEEECCBTTTBCCEEEEEEEEEECCSSSCCCCEEEECCCC
T ss_pred hHHHhhcCHhhHHHHHhcCceEEEEecccccCCCCCceEEEEEeCCCCCCccCCeEEEEEEecccCCCCCCCceeEeecc
Confidence 99999999999999999999999996 46789999999999 999999999999999864 3 24446899999
Q ss_pred eeecCC-CCcchhhhhccC-CCCCCCCcccccccccccccccccccCCCCCCCCCChhhHHHHHHhhhccccchhHHhhh
Q 017359 206 IEWYPG-KCLTQKLLKKKP-KKGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQDYDIGSIALCR 283 (373)
Q Consensus 206 I~WK~G-KnlT~k~~kKk~-kkg~k~~r~v~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D~eig~~~~~~ 283 (373)
|+||+| +++|+++++||+ ++|++++|+ ...||||||+++.+|.+. .+..+|+||+
T Consensus 146 I~WK~g~~~~~~~~~~kk~~~~~~~~~r~-----~~~SFF~fF~~~~~~~~~-------------~~~~d~eig~----- 202 (264)
T 2zd7_A 146 IEWPQSYDSINPDLIKDKRSPEGKKKYRQ-----GMKTIFGWFRWTGLKPGK-------------EFPHGDSLAS----- 202 (264)
T ss_dssp CCCCGGGGGGCTTTCSCSSSHHHHHHHHH-----HHTSHHHHTTCCSSSTTS-------------SSTTHHHHHH-----
T ss_pred cccCCCccccchhhhhhccccccccccCC-----CCCCcceecCCCCCCccc-------------cccCchhHHH-----
Confidence 999996 466787776553 344433332 357999999999887543 1456899999
Q ss_pred hhhcccccccchhhhccccccc
Q 017359 284 STIRDKIIPHAVSWFTGEAIQE 305 (373)
Q Consensus 284 ~~ikd~IiP~AV~yftGea~~~ 305 (373)
+|++.|||+||.||||++.+.
T Consensus 203 -~Ikd~I~P~al~yf~g~~~d~ 223 (264)
T 2zd7_A 203 -LFSEEIYPFCVKYYAEAQRDL 223 (264)
T ss_dssp -HHHHTHHHHHHHHHHHHHHTT
T ss_pred -HHHhhhccCHHHHhccccccc
Confidence 999999999999999998864
No 4
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=100.00 E-value=8.7e-60 Score=442.13 Aligned_cols=208 Identities=34% Similarity=0.643 Sum_probs=160.9
Q ss_pred hhcCCchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccccCCcccccchhhh
Q 017359 36 LAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVAMDQEE 115 (373)
Q Consensus 36 l~~~~s~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~G~~e~~~~E~~~~~~~ 115 (373)
..|.+.+.+...+++++++|.+|+.||.+++.|+++|++++++||+||+++++|||++|++||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~l~~L~~iQ~e~~~l~~e~~~ev~~lE~ky~~~~~Ply~kR~eII----------------- 75 (225)
T 2e50_A 13 LNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELI----------------- 75 (225)
T ss_dssp TTC-----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------
T ss_pred cccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH-----------------
Confidence 334445678899999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCCcchHHHHhhchhhhhhcchhhHHhhccccccEEEEeCCC-CceEEEEEeCCCCCcccceeeeEEeeccCC
Q 017359 116 DKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDP-KGFKLEFYFDPNPYFKNSVLTKTYHMIDED 194 (373)
Q Consensus 116 ~~~~~~kgIP~FWltaL~N~~~ls~~I~e~De~iLk~L~DI~v~~~ed~-~gF~L~F~F~~NpYF~N~vLtKty~l~~~~ 194 (373)
+|||+||++||+||+.|+.+|+++|++||+||+||+|++++++ .||+|+|+|++||||+|++|||+|+|..+|
T Consensus 76 ------~~IP~FW~tal~n~~~l~~~i~e~De~iL~~L~dI~v~~~~d~~~gf~i~F~F~~N~yF~N~vLtK~y~~~~~g 149 (225)
T 2e50_A 76 ------AKIPNFWVTTFVNHPQVSALLGEEDEEAMHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHMNESG 149 (225)
T ss_dssp ------TTSTTHHHHHHHTSHHHHTTCCHHHHHHGGGEEEEEEEECCSSCCCEEEEEEECSCSSBSCSEEEEEEC-----
T ss_pred ------hccccHHHHHHhcChhhhhhccHhHHHHHHhcCeeEEEEccCCCCceEEEEEeCCCCCccCCEEEEEEEecCCC
Confidence 7999999999999999999999999999999999999998754 599999999999999999999999999888
Q ss_pred CcceecccceeeeecCCCCcchhhhhccCCCCCCCCcccccccccccccccccccCCCCCCCCCChhhHHHHHHhhhccc
Q 017359 195 EPILEKAIGTEIEWYPGKCLTQKLLKKKPKKGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQDY 274 (373)
Q Consensus 195 dp~~~~~~gt~I~WK~GKnlT~k~~kKk~kkg~k~~r~v~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D~ 274 (373)
+| +++||+|+||+|||||+++++|++|+|++ |+ .+++.||||||+++..|+ ++
T Consensus 150 ~~---~s~~t~I~Wk~gkd~t~~~~~kk~~~~~~--r~---~~~~~SFF~fF~~~~~~~-------------------~~ 202 (225)
T 2e50_A 150 DP---SSKSTEIKWKSGKDMTKRSSQTQNKASRK--RQ---HEEPESFFTWFTDHSDAG-------------------AD 202 (225)
T ss_dssp -----CEEECCCCBCSSCCC---------------------------CGGGGC-------------------------CH
T ss_pred Cc---ccCCCcceecCCCCccchhhhhcccccCc--cc---CCCCCCcceecCCCCCCc-------------------hh
Confidence 77 68999999999999999987776655433 32 246789999999986552 25
Q ss_pred cchhHHhhhhhhcccccccchhhhc
Q 017359 275 DIGSIALCRSTIRDKIIPHAVSWFT 299 (373)
Q Consensus 275 eig~~~~~~~~ikd~IiP~AV~yft 299 (373)
+||+ +|+++|||+||.|||
T Consensus 203 eige------~ikd~i~P~av~yy~ 221 (225)
T 2e50_A 203 ELGE------VIKDDIWPNPLQYYL 221 (225)
T ss_dssp HHHH------HHHHTTTTCSHHHHC
T ss_pred HHHH------HHHhCccccHHHHhc
Confidence 7999 999999999999999
No 5
>3kyp_A Pfnaps, nucleosome assembly protein; histone recognition, chaperone; 2.80A {Plasmodium falciparum}
Probab=100.00 E-value=2.4e-56 Score=410.08 Aligned_cols=188 Identities=21% Similarity=0.442 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccccCCcccccchhhhhhhhhccCCCcchHHHHhh
Q 017359 55 VEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVAMDQEEDKATEEKGVPDFWLTAMKN 134 (373)
Q Consensus 55 v~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~G~~e~~~~E~~~~~~~~~~~~~kgIP~FWltaL~N 134 (373)
+.+|+.||.+++.|++++.+++++||+||+++++|+|++|++|| +|||+||++||+|
T Consensus 2 ~~~L~~iQ~e~~~l~~~~~~e~~~le~ky~~~~~p~y~kR~~iI-----------------------~~IP~FW~t~l~n 58 (193)
T 3kyp_A 2 MQDFEDIQKDIEQLDIKCAHEQMNIQKQYDEKKKPLFEKRDEII-----------------------QKIPGFWANTLRK 58 (193)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------HTSTTTTHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHh-----------------------cCCccHHHHHHHc
Confidence 47899999999999999999999999999999999999999999 7999999999999
Q ss_pred chhhhhhcchhhHHhhccccccEEEEeC-CCCceEEEEEeCC--CCCcccceeeeEEeeccCCCcceecccceeeeecCC
Q 017359 135 NDVLSEEITERDEGALKFLKDIKWFRID-DPKGFKLEFYFDP--NPYFKNSVLTKTYHMIDEDEPILEKAIGTEIEWYPG 211 (373)
Q Consensus 135 ~~~ls~~I~e~De~iLk~L~DI~v~~~e-d~~gF~L~F~F~~--NpYF~N~vLtKty~l~~~~dp~~~~~~gt~I~WK~G 211 (373)
|+.++.++ ++|+++|+||+||+|++.. .+.||+|+|+|++ ||||+|++|||+|++..+|.++ ++||+|+||+|
T Consensus 59 ~~~ls~i~-~~De~~L~~L~di~v~~~~~~~~gf~i~F~F~~n~N~yF~N~vLtK~y~~~~~g~~~---~~~t~I~Wk~g 134 (193)
T 3kyp_A 59 HPALSDIV-PEDIDILNHLVKLDLKDNMDNNGSYKITFIFGEKAKEFMEPLTLVKHVTFDNNQEKV---VECTRIKWKEG 134 (193)
T ss_dssp SSSSTTSS-CHHHHTTCCCCEECCBCCSSSSCCCEEEEECSCCSSCSCSCEEEECCCCCC----CC---CCCCCCCCCSS
T ss_pred CchHHHHH-HhhHHHHcCcceEEEEEccCCCCceEEEEEEcCCCCccccCceEEEEEEEcCCCCee---eccceeeeecC
Confidence 99999865 7999999999999999864 4569999999998 8999999999999998877664 67999999999
Q ss_pred CCcchhhhhccCCCCCCCCcccccccccccccccccccCCCCCCCCCChhhHHHHHHhhhccccchhHHhhhhhhccccc
Q 017359 212 KCLTQKLLKKKPKKGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQDYDIGSIALCRSTIRDKII 291 (373)
Q Consensus 212 KnlT~k~~kKk~kkg~k~~r~v~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D~eig~~~~~~~~ikd~Ii 291 (373)
||||+++.+|++ ++++++++.||||||+++..|+ |++||+ +||++||
T Consensus 135 k~~t~~~~~kr~--------~~~~~~~~~SFF~wF~~~~~~~-------------------~~eige------~ikd~i~ 181 (193)
T 3kyp_A 135 KNPIAAVTHNRS--------DLDNEIPKWSIFEWFTTDELQD-------------------KPDVGE------LIRREIW 181 (193)
T ss_dssp CCCCC----------------------CCCTTTTCCSSCCTT-------------------TTCTTH------HHHTTTT
T ss_pred CCcchhhhhccc--------cccccCCcchHhhhcCCCCcCC-------------------chHHHH------HHHhCee
Confidence 999987654332 3456678999999999987663 458999 9999999
Q ss_pred ccchhhhcccc
Q 017359 292 PHAVSWFTGEA 302 (373)
Q Consensus 292 P~AV~yftGea 302 (373)
|+||.|||||.
T Consensus 182 P~~l~yy~ge~ 192 (193)
T 3kyp_A 182 HNPLSYYLGLE 192 (193)
T ss_dssp TCHHHHHC---
T ss_pred eCHHHHhCCCC
Confidence 99999999974
No 6
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=93.53 E-value=0.32 Score=35.15 Aligned_cols=44 Identities=23% Similarity=0.339 Sum_probs=37.3
Q ss_pred chhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 017359 41 SDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTK 93 (373)
Q Consensus 41 s~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~k 93 (373)
-+|+..|+ +..|+.....|...+++|+.+|...|+.+.+||.+.
T Consensus 4 f~fLk~ls---------~eEL~~rl~~Ld~~Me~Ei~elr~RY~~KRqPIldA 47 (51)
T 2jo8_A 4 YEFLKSWT---------VEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDA 47 (51)
T ss_dssp CGGGGGSC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHhCC---------HHHHHHHHHHccHHHHHHHHHHHHHHHHhHhhHHHH
Confidence 36777777 556677788999999999999999999999999864
No 7
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=91.91 E-value=0.038 Score=52.96 Aligned_cols=7 Identities=0% Similarity=0.268 Sum_probs=3.0
Q ss_pred HHHhhch
Q 017359 130 TAMKNND 136 (373)
Q Consensus 130 taL~N~~ 136 (373)
.+|.+++
T Consensus 181 ~~l~~~~ 187 (386)
T 2ca6_A 181 KTFQSHR 187 (386)
T ss_dssp HHHHHCT
T ss_pred HHHHhCC
Confidence 4444443
No 8
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=85.68 E-value=0.29 Score=49.39 Aligned_cols=54 Identities=26% Similarity=0.322 Sum_probs=26.8
Q ss_pred HHHHHHHHHhhhhcCCchhhhcCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 017359 25 LVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVL-REIQSEHDELEAKFFEERAAL 79 (373)
Q Consensus 25 ~~~~l~~~l~~l~~~~s~~ie~Lp~~v~~rv~aL-k~LQ~e~~~le~kf~~E~~~L 79 (373)
|+....+.+.+|...-..-|..|-. ++..+..| ...+.++..|+.+|.+...-|
T Consensus 77 l~~~~~~~i~sLp~~v~~rI~aLk~-lQ~e~~~le~ef~~ev~eLE~Ky~~~~~PL 131 (417)
T 2ayu_A 77 LVGQDSGYVGGLPKNVKEKLLSLKT-LQSELFEVEKEFQVEMFELENKFLQKYKPI 131 (417)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccchhhcCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444333333444432 33333333 446666777777776655555
No 9
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=73.59 E-value=0.82 Score=43.26 Aligned_cols=45 Identities=13% Similarity=-0.023 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 017359 49 PAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTK 93 (373)
Q Consensus 49 ~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~k 93 (373)
.+++..+..|..||.++..+..+..++..++.+-+..++..|...
T Consensus 9 ~~l~~~~~~l~~lq~e~~~~~~ele~ky~~~~~Ply~kR~eII~~ 53 (264)
T 2zd7_A 9 NEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDE 53 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc
Confidence 346778889999999999998888888888877766666666654
No 10
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=70.19 E-value=16 Score=32.01 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Q 017359 51 VRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVN 99 (373)
Q Consensus 51 v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~ 99 (373)
+-..+..|..|+.++..+++.+..++.++..+|.+..+||-.+...+-.
T Consensus 18 ~~~alr~ia~l~r~~~~i~~~~n~eI~~ik~~~~~~~~~l~~~i~~l~~ 66 (171)
T 2p2u_A 18 AEGALAEIATIDRKVGEIEAQMNEAIDAAKARASQKSAPLLARRKELED 66 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6667888999999999999999999999999999999999998888773
No 11
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=61.20 E-value=1.7 Score=42.35 Aligned_cols=10 Identities=0% Similarity=-0.064 Sum_probs=4.2
Q ss_pred cccccccccc
Q 017359 239 CESFFNFFNP 248 (373)
Q Consensus 239 ~~SFFnfF~~ 248 (373)
.+|.-+.++.
T Consensus 241 npsL~~il~~ 250 (335)
T 4fp9_B 241 NPLLKDILRV 250 (335)
T ss_dssp CCCHHHHTTS
T ss_pred CccHHHHHcC
Confidence 3444444443
No 12
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=58.17 E-value=25 Score=28.30 Aligned_cols=49 Identities=16% Similarity=0.262 Sum_probs=34.2
Q ss_pred chhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 017359 41 SDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYE 96 (373)
Q Consensus 41 s~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~e 96 (373)
.+-.++|||+.| .+.||.++..|+.++.++... +.-..++.-.|.+--.
T Consensus 5 ~~d~s~LPpeqR-----kkkL~~Ki~el~~ei~ke~~~--regl~Km~~vY~~nP~ 53 (98)
T 2ke4_A 5 TEDFSHLPPEQQ-----RKRLQQQLEERSRELQKEVDQ--REALKKMKDVYEKTPQ 53 (98)
T ss_dssp CSCSSSSCHHHH-----HHHHHHHHHHHHHHHHHHHHH--HTHHHHHHHHHHHCGG
T ss_pred chhhccCCHHHH-----HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHcCCc
Confidence 345689999998 457899999999998887775 3334444555544433
No 13
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=49.00 E-value=71 Score=24.94 Aligned_cols=52 Identities=27% Similarity=0.339 Sum_probs=35.3
Q ss_pred CchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH---HH-------HHHHHHHHHHHhHHH
Q 017359 40 HSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFE---ER-------AALEAKYQKLYQPMY 91 (373)
Q Consensus 40 ~s~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf~~---E~-------~~LE~KY~k~~~Ply 91 (373)
|.+.++.|-.+|+..|..+.-||.++..|..+-.. +. ..|..+...+++..-
T Consensus 4 S~ElleqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~ 65 (81)
T 2jee_A 4 SLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQN 65 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 44667778888888889888889888888666432 22 226666666655443
No 14
>2byk_A Chrac-16; nucleosome sliding, histone fold, DNA-binding protein; 2.4A {Drosophila melanogaster} SCOP: a.22.1.3 PDB: 2bym_A
Probab=39.71 E-value=7.4 Score=33.37 Aligned_cols=10 Identities=20% Similarity=0.444 Sum_probs=5.7
Q ss_pred ccccccchhh
Q 017359 288 DKIIPHAVSW 297 (373)
Q Consensus 288 d~IiP~AV~y 297 (373)
..|+|+-+.|
T Consensus 93 ~divP~ki~l 102 (140)
T 2byk_A 93 LQIVPQKIRV 102 (140)
T ss_dssp TTTSCSCC--
T ss_pred hccccchhhH
Confidence 4778876644
No 15
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=34.36 E-value=52 Score=26.04 Aligned_cols=30 Identities=20% Similarity=0.551 Sum_probs=24.2
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Q 017359 42 DVLEKLTPAVRKRVEVLREIQSEHDELEAK 71 (373)
Q Consensus 42 ~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~k 71 (373)
+.+++||.++++++.-++.+-.++..+..+
T Consensus 11 d~ie~LP~El~r~~~~irelD~~~~~~~~~ 40 (104)
T 4afl_A 11 DSIENLPFELQRNFQLMRDLDQRTEDLKAE 40 (104)
T ss_dssp HSGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999988888877766544
No 16
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=32.29 E-value=94 Score=29.46 Aligned_cols=47 Identities=19% Similarity=0.405 Sum_probs=33.7
Q ss_pred hhhcCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 017359 43 VLEKLTPA-----VRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTK 93 (373)
Q Consensus 43 ~ie~Lp~~-----v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~k 93 (373)
++.+++|. ++.||...+.+..++. .|.+|+.++|..|.+.++-|-.+
T Consensus 35 iL~sk~P~qa~~iL~~Rl~~~k~i~keL~----~f~kERa~IEe~YakqLrkLakk 86 (287)
T 3g9g_A 35 ILTTKSPYEATETIRIRLSQVKLLNKDFY----LLFKELANLKRNYAQQLRKIIAE 86 (287)
T ss_dssp TTTTSCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccCChHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555555 5566666666665554 68889999999999888877766
No 17
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.86 E-value=19 Score=23.27 Aligned_cols=13 Identities=8% Similarity=0.143 Sum_probs=9.9
Q ss_pred CCCCCCCCccccc
Q 017359 360 DAQQGERPPECKQ 372 (373)
Q Consensus 360 ~~~~~~~~~~c~~ 372 (373)
+...|++|+.|.+
T Consensus 2 ~~~~gekp~~C~~ 14 (38)
T 2eln_A 2 SSGSSGILLKCPT 14 (38)
T ss_dssp CCSSCCCCEECSS
T ss_pred CCCCCCCCCCCCC
Confidence 3456899999974
No 18
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=30.02 E-value=2.1e+02 Score=24.83 Aligned_cols=52 Identities=8% Similarity=0.044 Sum_probs=35.1
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhHHHHHHH
Q 017359 44 LEKLTPAVRKRVEVLREIQSEHDELEAKF---FEERAALEAKYQKLYQPMYTKRY 95 (373)
Q Consensus 44 ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf---~~E~~~LE~KY~k~~~Ply~kR~ 95 (373)
|..|-..++.+-..+..||.++..|+.++ ..++..|+..+..+.+-...+..
T Consensus 84 i~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~rk~ 138 (152)
T 3a7p_A 84 IRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKKTE 138 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556666677777888888877766 45677777777777776665543
No 19
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=29.27 E-value=1.1e+02 Score=24.18 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=24.6
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 017359 45 EKLTPAVRKRVEVLREIQSEHDELEAKF 72 (373)
Q Consensus 45 e~Lp~~v~~rv~aLk~LQ~e~~~le~kf 72 (373)
.++|+.++..+..+..+|.++..+..+.
T Consensus 2 ~~~~~e~Q~~i~~~~~l~~~~~~l~~q~ 29 (117)
T 2zqm_A 2 QNIPPQVQAMLGQLESYQQQLQLVVQQK 29 (117)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4789999999999999999999887764
No 20
>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1
Probab=25.09 E-value=3.2e+02 Score=23.24 Aligned_cols=69 Identities=13% Similarity=0.322 Sum_probs=39.1
Q ss_pred HHHHHHhhhhcCCchhhhcCCHHHHHHHHHHHHH-------HHHHHHHHHHHHH---HHHHHHHHHHHHHhHHHHHHHHH
Q 017359 28 VLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREI-------QSEHDELEAKFFE---ERAALEAKYQKLYQPMYTKRYEI 97 (373)
Q Consensus 28 ~l~~~l~~l~~~~s~~ie~Lp~~v~~rv~aLk~L-------Q~e~~~le~kf~~---E~~~LE~KY~k~~~Ply~kR~eI 97 (373)
.+..+|..+.. .+..+-..++.+|+.|... ...+..|-.+|.. +...++..|.+.++--..++..|
T Consensus 46 ~~~~~i~~l~~----~i~~~~~~~~~~lk~l~~~~~~~r~~k~~~~~L~~~f~~~~~~fq~~Q~~~~~~~k~~~~rq~~i 121 (196)
T 1fio_A 46 HLRHSLDNFVA----QATDLQFKLKNEIKSAQRDGIHDTNKQAQAENSRQRFLKLIQDYRIVDSNYKEENKEQAKRQYMI 121 (196)
T ss_dssp HHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH----HHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444443 2334444455555554432 2234455555544 55667888888888888877788
Q ss_pred hhc
Q 017359 98 VNG 100 (373)
Q Consensus 98 I~G 100 (373)
+++
T Consensus 122 ~~~ 124 (196)
T 1fio_A 122 IQP 124 (196)
T ss_dssp HCT
T ss_pred cCC
Confidence 754
No 21
>3bhp_A UPF0291 protein YNZC; NESG, SR384, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.01A {Bacillus subtilis}
Probab=24.86 E-value=88 Score=23.06 Aligned_cols=42 Identities=17% Similarity=0.209 Sum_probs=30.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 017359 47 LTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQP 89 (373)
Q Consensus 47 Lp~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~P 89 (373)
+......||..|...+.. ..|-.+=..|..+|.++|-+.++-
T Consensus 2 m~~~~i~RINeLakK~K~-~gLT~eEk~EQ~~LR~eYl~~fR~ 43 (60)
T 3bhp_A 2 ISNAKIARINELAAKAKA-GVITEEEKAEQQKLRQEYLKGFRS 43 (60)
T ss_dssp CCHHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 455667799999988876 555556667888888888776544
No 22
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=21.24 E-value=56 Score=24.85 Aligned_cols=22 Identities=9% Similarity=0.369 Sum_probs=17.8
Q ss_pred hhhcCCHHHHHHHHHHHHHHHH
Q 017359 43 VLEKLTPAVRKRVEVLREIQSE 64 (373)
Q Consensus 43 ~ie~Lp~~v~~rv~aLk~LQ~e 64 (373)
+|+.||+.+|.+|.+|-.-.-.
T Consensus 8 wL~~LP~~Lq~kV~aIV~~~Ps 29 (70)
T 2lh0_A 8 FLDELPESLSRKIGTVVRVLPS 29 (70)
T ss_dssp GGGGSCHHHHHHHHHHHTTCTT
T ss_pred HHHhCCHHHHHHHHHHHHhCcc
Confidence 8999999999999888654433
No 23
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=21.19 E-value=37 Score=21.79 Aligned_cols=12 Identities=8% Similarity=-0.047 Sum_probs=9.3
Q ss_pred CCCCCCCccccc
Q 017359 361 AQQGERPPECKQ 372 (373)
Q Consensus 361 ~~~~~~~~~c~~ 372 (373)
+-.||+|+.|.+
T Consensus 2 ~~~gekp~~C~~ 13 (36)
T 1fv5_A 2 SLLKPARFMCLP 13 (36)
T ss_dssp CSSSCCCCEETT
T ss_pred CCCCccCeECCC
Confidence 445899999975
Done!