Query 017359
Match_columns 373
No_of_seqs 219 out of 678
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 13:08:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017359.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017359hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ayua1 d.305.1.1 (A:70-370) N 100.0 1.4E-76 1E-80 574.8 13.3 270 29-306 1-299 (301)
2 d2e50a1 d.305.1.1 (A:1-222) Pr 100.0 7.8E-60 5.7E-64 439.4 18.1 215 29-299 6-221 (222)
3 d1tf5a2 a.172.1.1 (A:571-780) 52.1 18 0.0013 29.9 7.4 46 56-101 6-51 (210)
4 d1srka_ g.37.1.1 (A:) Zinc fin 42.2 4 0.00029 25.3 1.0 12 361-372 1-12 (35)
5 d1nkta2 a.172.1.1 (A:616-835) 41.8 32 0.0023 28.5 7.4 46 56-101 6-51 (220)
6 d256ba_ a.24.3.1 (A:) Cytochro 41.1 7.9 0.00058 29.5 2.9 39 50-88 57-106 (106)
7 d1quua1 a.7.1.1 (A:1-124) alph 39.6 30 0.0022 25.4 6.2 54 30-83 68-121 (124)
8 d1p7aa_ g.37.1.1 (A:) Kruppel- 31.1 7.2 0.00053 24.1 0.9 11 362-372 6-16 (37)
9 d1x6ha2 g.37.1.1 (A:8-43) Tran 31.1 7 0.00051 24.1 0.8 10 363-372 4-13 (36)
10 d2cvba1 c.47.1.10 (A:2-188) Pr 29.8 6.7 0.00048 32.2 0.7 17 200-216 168-184 (187)
11 d1x6ea1 g.37.1.1 (A:8-40) Zinc 29.6 7.7 0.00056 23.6 0.8 10 363-372 3-12 (33)
12 d2ct1a2 g.37.1.1 (A:8-43) Tran 23.2 12 0.00085 23.1 0.8 10 363-372 4-13 (36)
13 d1s35a1 a.7.1.1 (A:1063-1168) 23.0 77 0.0056 22.0 5.8 49 32-80 54-103 (106)
No 1
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.4e-76 Score=574.83 Aligned_cols=270 Identities=38% Similarity=0.706 Sum_probs=232.5
Q ss_pred HHHHHhhhhcCCchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccccCCccc
Q 017359 29 LKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNE 108 (373)
Q Consensus 29 l~~~l~~l~~~~s~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~G~~e~~~~E 108 (373)
||+||++|+|++++||++||++||+||.||++||.++.+|+++|++++++||++|+++|+|||++|++||+|.++|+.+|
T Consensus 1 ~~~~l~~l~~~~~~~i~~Lp~~v~~rv~aLk~lq~e~~~le~~f~~e~~~LE~ky~~~~~ply~kR~~II~G~~ept~eE 80 (301)
T d2ayua1 1 IQDRLGSLVGQDSGYVGGLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIISGQEQPKPEQ 80 (301)
T ss_dssp CCSTTTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCHHH
T ss_pred CcchhhhhhcCCcchHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHCCCCCCCHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999776
Q ss_pred ccchh--------------------hhhhhhhccCCCcchHHHHhhchhhhhhcchhhHHhhccccccEEEEeCCCC-ce
Q 017359 109 VAMDQ--------------------EEDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDPK-GF 167 (373)
Q Consensus 109 ~~~~~--------------------~~~~~~~~kgIP~FWltaL~N~~~ls~~I~e~De~iLk~L~DI~v~~~ed~~-gF 167 (373)
+.+.. .......++|||+||++||+||+.|+.||+++|++||+||+||+|++..++. ||
T Consensus 81 ~~~~~~~~e~~~~~e~~~~~~~~~~~~~~~~~~kgIP~FWl~vl~n~~~l~~~I~e~D~~~L~~L~dI~ve~~~d~~~gf 160 (301)
T d2ayua1 81 IAKGQEIVESLNETELLVDEEEKAQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEVLEYLQDIGLEYLTDGRPGF 160 (301)
T ss_dssp HHHHHHHHHHTTCGGGCCSSCC---------CCSSCTTHHHHHHHTSTTGGGTCCHHHHTGGGGEEEEECCBCCSSSCEE
T ss_pred hhcccccccccchhhhhhhhhhhhccccccccccCCchHHHHHHHcCHHHhhhCCHHHHHHHHhhceeEEEEccCCCCCc
Confidence 53211 0122345689999999999999999999999999999999999999887655 99
Q ss_pred EEEEEe--CCCCCcccceeeeEEeeccC----CCcceecccceeeeecC-CCCcchhhhhccCC-CCCCCCccccccccc
Q 017359 168 KLEFYF--DPNPYFKNSVLTKTYHMIDE----DEPILEKAIGTEIEWYP-GKCLTQKLLKKKPK-KGSKNAKPITKTEEC 239 (373)
Q Consensus 168 ~L~F~F--~~NpYF~N~vLtKty~l~~~----~dp~~~~~~gt~I~WK~-GKnlT~k~~kKk~k-kg~k~~r~v~k~~~~ 239 (373)
+|+|+| +|||||+|++|||+|+|... +.+++.+++||+|+||+ |+|+|+++++||+| |+++.+|++++++++
T Consensus 161 ~l~F~F~f~~N~yF~N~vLtK~y~~~~~~~~~~~~~~~~~eg~~I~WK~~~k~~t~~~~~kk~~~k~~~~~r~~~k~~~~ 240 (301)
T d2ayua1 161 KLLFRFDSSANPFFTNDILCKTYFYQKELGYSGDFIYDHAEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPI 240 (301)
T ss_dssp EEEEEECTTTCSSBCCSEEEEEEEEESSCCSSSSCEEEEEEECCCCBSCTTTCTTEEEEECCC---------CCEEEEEC
T ss_pred eEEEEEecCCCCCCCCCeEEEEEEEecCCCCCCCccccccCccccccccCCCcchhhhhhhcccCCCCCCCcccccCCCC
Confidence 999999 68999999999999999754 23456689999999999 68999999877765 667888999999999
Q ss_pred ccccccccccCCCCCCCCCChhhHHHHHHhhhccccchhHHhhhhhhcccccccchhhhcccccccc
Q 017359 240 ESFFNFFNPPQVPEDDEDIDEDTAEELQNQMEQDYDIGSIALCRSTIRDKIIPHAVSWFTGEAIQEE 306 (373)
Q Consensus 240 ~SFFnfF~~~~~p~~~~~~dee~~eel~~~l~~D~eig~~~~~~~~ikd~IiP~AV~yftGea~~~d 306 (373)
.||||||+||.+|.++. +++..+++++.|+.||+||. +|+++|||+||.||||+|++++
T Consensus 241 ~SFF~fF~~~~~~~~~~--~~~~~e~~~~~l~~D~eig~------~i~d~iiP~Av~yytGea~~~~ 299 (301)
T d2ayua1 241 ESFFNFFDPPKIQNEDQ--DEELEEDLEERLALDYSIGE------QLKDKLIPRAVDWFTGAALEFE 299 (301)
T ss_dssp CCGGGGGSCSCSCCCTT--SSSTTHHHHHHHHHHHHHHH------HHHHTTTTTHHHHHHSHHHHHH
T ss_pred CCCCcCCCCCCCCCccc--cchhhHHHHHHHhhhHHHHH------HHHhcccccHHHhhCchhhhcc
Confidence 99999999999987553 33445678999999999999 9999999999999999999875
No 2
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=7.8e-60 Score=439.44 Aligned_cols=215 Identities=33% Similarity=0.628 Sum_probs=166.1
Q ss_pred HHHHHhhhhcCCchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhccccCCccc
Q 017359 29 LKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNE 108 (373)
Q Consensus 29 l~~~l~~l~~~~s~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~G~~e~~~~E 108 (373)
.+.+...+++.+.++++++++.++++|.+|+.||.++..|+.++++++++|++||.++++|||++|++||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~iQ~e~~~l~~e~~~e~~~le~k~~~~~~ply~~R~~iI---------- 75 (222)
T d2e50a1 6 AKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELI---------- 75 (222)
T ss_dssp HHHHHHHTTC-----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred ccccchhcccccCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHh----------
Confidence 3445568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhhhhccCCCcchHHHHhhchhhhhhcchhhHHhhccccccEEEEeCCCC-ceEEEEEeCCCCCcccceeeeE
Q 017359 109 VAMDQEEDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDPK-GFKLEFYFDPNPYFKNSVLTKT 187 (373)
Q Consensus 109 ~~~~~~~~~~~~~kgIP~FWltaL~N~~~ls~~I~e~De~iLk~L~DI~v~~~ed~~-gF~L~F~F~~NpYF~N~vLtKt 187 (373)
+|||+||++||+||+.++.+|+++|+++|+||+||+|++.+++. ||+|+|+|.+||||+|++|||+
T Consensus 76 -------------~gIP~FW~~~l~n~~~l~~~I~~~D~~~L~~L~dI~v~~~~~~~~~f~i~F~F~~N~yF~N~~L~K~ 142 (222)
T d2e50a1 76 -------------AKIPNFWVTTFVNHPQVSALLGEEDEEAMHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKE 142 (222)
T ss_dssp -------------TTSTTHHHHHHHTSHHHHTTCCHHHHHHGGGEEEEEEEECCSSCCCEEEEEEECSCSSBSCSEEEEE
T ss_pred -------------ccCccHHHHHHHcCcchhhhCCHHHHHHHHhhhheeeeeccCCCCceEEEEEeCCCCcccCCeEEEE
Confidence 89999999999999999999999999999999999999887654 9999999999999999999999
Q ss_pred EeeccCCCcceecccceeeeecCCCCcchhhhhccCCCCCCCCcccccccccccccccccccCCCCCCCCCChhhHHHHH
Q 017359 188 YHMIDEDEPILEKAIGTEIEWYPGKCLTQKLLKKKPKKGSKNAKPITKTEECESFFNFFNPPQVPEDDEDIDEDTAEELQ 267 (373)
Q Consensus 188 y~l~~~~dp~~~~~~gt~I~WK~GKnlT~k~~kKk~kkg~k~~r~v~k~~~~~SFFnfF~~~~~p~~~~~~dee~~eel~ 267 (373)
|+|...+++ +++||+|+||+|||||+++.+++++.+ ..++++++.||||||+++..|+.+
T Consensus 143 y~~~~~~~~---~~~~t~I~Wk~gkd~t~k~~~~~~~~~-----~~~~~~~~~SFFnfF~~~~~~~~d------------ 202 (222)
T d2e50a1 143 FHMNESGDP---SSKSTEIKWKSGKDMTKRSSQTQNKAS-----RKRQHEEPESFFTWFTDHSDAGAD------------ 202 (222)
T ss_dssp EC----------CEEECCCCBCSSCCC---------------------------CGGGGC------CH------------
T ss_pred EEecCCCCc---ccccccceecCCCccccccccccccCc-----cccccCCCCChhhcCCCCCCCCch------------
Confidence 999887776 589999999999999998765444322 223456789999999998766432
Q ss_pred HhhhccccchhHHhhhhhhcccccccchhhhc
Q 017359 268 NQMEQDYDIGSIALCRSTIRDKIIPHAVSWFT 299 (373)
Q Consensus 268 ~~l~~D~eig~~~~~~~~ikd~IiP~AV~yft 299 (373)
+||+ +|+++|||+||.||+
T Consensus 203 -------eI~~------~i~d~i~p~av~yyL 221 (222)
T d2e50a1 203 -------ELGE------VIKDDIWPNPLQYYL 221 (222)
T ss_dssp -------HHHH------HHHHTTTTCSHHHHC
T ss_pred -------HHHH------HHHhhhchhhhHhhc
Confidence 5999 999999999999997
No 3
>d1tf5a2 a.172.1.1 (A:571-780) Helical scaffold and wing domains of SecA {Bacillus subtilis [TaxId: 1423]}
Probab=52.13 E-value=18 Score=29.94 Aligned_cols=46 Identities=9% Similarity=0.190 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcc
Q 017359 56 EVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGV 101 (373)
Q Consensus 56 ~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~G~ 101 (373)
.++...|.+....+-...+-+++..-=-+.+++-+|..|+.|+.|.
T Consensus 6 k~ie~AQkkvE~~nf~iRK~lleyDdVln~QR~~IY~~R~~iL~~~ 51 (210)
T d1tf5a2 6 RAVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVIDSE 51 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 4677888888888888888888888888899999999999999653
No 4
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.22 E-value=4 Score=25.34 Aligned_cols=12 Identities=33% Similarity=0.767 Sum_probs=9.3
Q ss_pred CCCCCCCccccc
Q 017359 361 AQQGERPPECKQ 372 (373)
Q Consensus 361 ~~~~~~~~~c~~ 372 (373)
|-.||||+.|+.
T Consensus 1 g~TGekPy~C~~ 12 (35)
T d1srka_ 1 GSSGKRPFVCRI 12 (35)
T ss_dssp CCSCCSCEECSS
T ss_pred CCCCCccccCCC
Confidence 346899999973
No 5
>d1nkta2 a.172.1.1 (A:616-835) Helical scaffold and wing domains of SecA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=41.83 E-value=32 Score=28.50 Aligned_cols=46 Identities=11% Similarity=0.244 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcc
Q 017359 56 EVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGV 101 (373)
Q Consensus 56 ~aLk~LQ~e~~~le~kf~~E~~~LE~KY~k~~~Ply~kR~eII~G~ 101 (373)
.+|...|.+....+=...+-+++..-=-+.+++-+|..|+.|+.|.
T Consensus 6 k~Ie~AQkkVE~~nfdiRK~lleYDdVmn~QR~~IY~~R~~iL~~~ 51 (220)
T d1nkta2 6 RAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEGE 51 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhHHHHHhHHHHHHHHHHHHHHHHhhHHHHhccc
Confidence 4677778888877777777777767777789999999999999654
No 6
>d256ba_ a.24.3.1 (A:) Cytochrome b562 {Escherichia coli [TaxId: 562]}
Probab=41.06 E-value=7.9 Score=29.48 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHh
Q 017359 50 AVRKRVEVLREIQSEHDELEAKF-----------FEERAALEAKYQKLYQ 88 (373)
Q Consensus 50 ~v~~rv~aLk~LQ~e~~~le~kf-----------~~E~~~LE~KY~k~~~ 88 (373)
........+..|+..++.++.-. ..++..+..+|++.|+
T Consensus 57 ~~~~~~~g~d~L~~~ld~i~~la~~G~l~eAk~~l~~l~~~r~~YHkk~k 106 (106)
T d256ba_ 57 EMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYHQKYR 106 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhcC
Confidence 34445677888888888886543 4567788888888874
No 7
>d1quua1 a.7.1.1 (A:1-124) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.56 E-value=30 Score=25.37 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=28.7
Q ss_pred HHHHhhhhcCCchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017359 30 KNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKY 83 (373)
Q Consensus 30 ~~~l~~l~~~~s~~ie~Lp~~v~~rv~aLk~LQ~e~~~le~kf~~E~~~LE~KY 83 (373)
+.++..|.......+..-|+....-...+..|+..+..|..........|+.-+
T Consensus 68 ~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rW~~L~~~~~~R~~~L~~a~ 121 (124)
T d1quua1 68 QDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERME 121 (124)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444443344456666666666666666666555544
No 8
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.11 E-value=7.2 Score=24.13 Aligned_cols=11 Identities=27% Similarity=0.730 Sum_probs=8.8
Q ss_pred CCCCCCccccc
Q 017359 362 QQGERPPECKQ 372 (373)
Q Consensus 362 ~~~~~~~~c~~ 372 (373)
-.||||+.|.+
T Consensus 6 HTgeKPy~C~~ 16 (37)
T d1p7aa_ 6 STGIKPFQCPD 16 (37)
T ss_dssp TCCSSSBCCTT
T ss_pred cCCccCeEeCC
Confidence 35899999975
No 9
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.11 E-value=7 Score=24.07 Aligned_cols=10 Identities=40% Similarity=1.006 Sum_probs=8.4
Q ss_pred CCCCCccccc
Q 017359 363 QGERPPECKQ 372 (373)
Q Consensus 363 ~~~~~~~c~~ 372 (373)
.||||++|.+
T Consensus 4 TgekPy~C~~ 13 (36)
T d1x6ha2 4 TGEKPYACSH 13 (36)
T ss_dssp CCCCCEECSS
T ss_pred CCCCCEECCC
Confidence 4899999975
No 10
>d2cvba1 c.47.1.10 (A:2-188) Probable thiol-disulfide isomerase/thioredoxin TTHA0593 {Thermus thermophilus [TaxId: 274]}
Probab=29.78 E-value=6.7 Score=32.23 Aligned_cols=17 Identities=41% Similarity=0.735 Sum_probs=13.7
Q ss_pred cccceeeeecCCCCcch
Q 017359 200 KAIGTEIEWYPGKCLTQ 216 (373)
Q Consensus 200 ~~~gt~I~WK~GKnlT~ 216 (373)
.+.||.|.||+|+..-+
T Consensus 168 ~~~GC~ik~~~~~~~~~ 184 (187)
T d2cvba1 168 PAIGCTIKWRPGNEPEV 184 (187)
T ss_dssp CCCSEECCCCTTCCCCC
T ss_pred CCCCcceeECCCCCccc
Confidence 57899999999986543
No 11
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.64 E-value=7.7 Score=23.63 Aligned_cols=10 Identities=40% Similarity=0.943 Sum_probs=8.2
Q ss_pred CCCCCccccc
Q 017359 363 QGERPPECKQ 372 (373)
Q Consensus 363 ~~~~~~~c~~ 372 (373)
.||||++|++
T Consensus 3 Tgekpy~C~~ 12 (33)
T d1x6ea1 3 SGEKPYGCVE 12 (33)
T ss_dssp TTCCCEECSS
T ss_pred CCCCCeeCCC
Confidence 3799999974
No 12
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.21 E-value=12 Score=23.05 Aligned_cols=10 Identities=50% Similarity=0.956 Sum_probs=8.2
Q ss_pred CCCCCccccc
Q 017359 363 QGERPPECKQ 372 (373)
Q Consensus 363 ~~~~~~~c~~ 372 (373)
.||||+.|..
T Consensus 4 TgekP~~C~~ 13 (36)
T d2ct1a2 4 SGEKPYECYI 13 (36)
T ss_dssp SCCCSEECTT
T ss_pred CCCCCEeCCC
Confidence 4899999974
No 13
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.96 E-value=77 Score=22.04 Aligned_cols=49 Identities=14% Similarity=0.128 Sum_probs=22.6
Q ss_pred HHhhhhcCCchhhhcCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 017359 32 KLQNLAGQHSDVLEKLTPAVRKRVE-VLREIQSEHDELEAKFFEERAALE 80 (373)
Q Consensus 32 ~l~~l~~~~s~~ie~Lp~~v~~rv~-aLk~LQ~e~~~le~kf~~E~~~LE 80 (373)
++..+.......+..-++.....|. .|..|+..+..|..........|+
T Consensus 54 ~~~~~~~~g~~L~~~~~~~~~~~I~~~l~~L~~~w~~L~~~~~~R~~~Le 103 (106)
T d1s35a1 54 SYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWESRSHTLA 103 (106)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444434444433332222333 355566666666555555444443
Done!