Query 017366
Match_columns 373
No_of_seqs 170 out of 345
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 07:57:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017366.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017366hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 8E-112 2E-116 816.8 17.4 353 13-366 24-402 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 1.8E-96 4E-101 733.4 23.3 338 13-350 2-361 (361)
3 KOG1515 Arylacetamide deacetyl 95.5 0.072 1.6E-06 53.5 9.2 47 143-190 143-190 (336)
4 PRK10162 acetyl esterase; Prov 94.7 0.12 2.6E-06 50.9 8.2 44 147-190 132-178 (318)
5 PF00326 Peptidase_S9: Prolyl 93.4 0.072 1.6E-06 48.5 3.4 39 147-185 45-83 (213)
6 PF10340 DUF2424: Protein of u 93.0 0.8 1.7E-05 46.7 10.4 109 49-189 107-218 (374)
7 PF00135 COesterase: Carboxyle 91.9 0.5 1.1E-05 48.7 7.7 96 145-247 184-287 (535)
8 PRK10566 esterase; Provisional 90.2 0.64 1.4E-05 42.9 5.9 35 149-183 90-124 (249)
9 cd00312 Esterase_lipase Estera 89.5 0.73 1.6E-05 47.7 6.3 93 146-245 153-253 (493)
10 PF07859 Abhydrolase_3: alpha/ 88.9 0.72 1.6E-05 41.5 5.0 43 148-190 50-95 (211)
11 COG2939 Carboxypeptidase C (ca 86.6 3.6 7.7E-05 43.4 9.0 139 48-202 87-237 (498)
12 TIGR01840 esterase_phb esteras 83.8 1.5 3.3E-05 40.1 4.4 37 148-184 77-113 (212)
13 PF01764 Lipase_3: Lipase (cla 83.7 3.8 8.1E-05 34.5 6.5 54 165-224 63-117 (140)
14 PF12695 Abhydrolase_5: Alpha/ 83.3 1.7 3.8E-05 36.1 4.2 40 145-185 41-80 (145)
15 PRK10115 protease 2; Provision 83.1 0.87 1.9E-05 49.9 2.9 36 147-182 505-540 (686)
16 COG0657 Aes Esterase/lipase [L 82.9 2.6 5.7E-05 40.8 5.9 42 149-190 132-176 (312)
17 PLN02408 phospholipase A1 80.7 9.5 0.00021 38.9 9.1 64 154-224 188-252 (365)
18 PF05677 DUF818: Chlamydia CHL 78.6 5 0.00011 40.6 6.2 53 150-205 198-254 (365)
19 PF10503 Esterase_phd: Esteras 77.5 7.3 0.00016 36.8 6.7 41 149-193 80-120 (220)
20 cd00707 Pancreat_lipase_like P 77.1 5.9 0.00013 38.3 6.2 58 149-209 95-152 (275)
21 PRK13604 luxD acyl transferase 75.6 5.8 0.00012 39.5 5.7 51 146-206 91-141 (307)
22 PF00756 Esterase: Putative es 74.7 3.4 7.5E-05 38.2 3.7 43 148-191 97-140 (251)
23 PLN02802 triacylglycerol lipas 72.4 12 0.00026 39.8 7.3 52 166-223 330-381 (509)
24 TIGR02821 fghA_ester_D S-formy 72.1 4.8 0.0001 38.5 4.1 23 164-186 136-158 (275)
25 PF02230 Abhydrolase_2: Phosph 71.4 8.9 0.00019 35.1 5.6 55 149-209 89-143 (216)
26 PF12242 Eno-Rase_NADH_b: NAD( 70.6 6.7 0.00015 31.3 3.8 34 147-180 20-55 (78)
27 COG1770 PtrB Protease II [Amin 70.4 4.4 9.6E-05 44.1 3.7 33 146-178 507-539 (682)
28 cd00519 Lipase_3 Lipase (class 70.3 14 0.0003 34.2 6.7 39 165-204 127-165 (229)
29 PF07819 PGAP1: PGAP1-like pro 68.9 27 0.00058 32.8 8.3 36 149-184 65-103 (225)
30 cd07224 Pat_like Patatin-like 68.5 5.7 0.00012 37.5 3.7 32 153-185 17-48 (233)
31 KOG1209 1-Acyl dihydroxyaceton 68.0 13 0.00029 35.6 5.9 66 162-227 4-76 (289)
32 PLN02454 triacylglycerol lipas 67.3 19 0.00042 37.3 7.5 64 154-224 216-282 (414)
33 cd07198 Patatin Patatin-like p 66.7 6.7 0.00015 34.9 3.6 31 152-185 15-45 (172)
34 PF03583 LIP: Secretory lipase 66.4 11 0.00023 36.9 5.3 48 161-209 66-115 (290)
35 COG3509 LpqC Poly(3-hydroxybut 66.3 78 0.0017 31.6 11.1 35 150-184 128-162 (312)
36 PLN02209 serine carboxypeptida 66.0 70 0.0015 33.3 11.4 144 46-201 52-206 (437)
37 PRK10439 enterobactin/ferric e 65.9 8.6 0.00019 39.6 4.7 43 149-191 265-313 (411)
38 cd00741 Lipase Lipase. Lipase 65.8 16 0.00035 31.5 5.8 28 164-191 26-53 (153)
39 KOG4627 Kynurenine formamidase 64.8 6.8 0.00015 37.3 3.3 34 154-188 125-158 (270)
40 PF00975 Thioesterase: Thioest 64.6 19 0.00041 32.6 6.2 53 148-203 50-102 (229)
41 PF05728 UPF0227: Uncharacteri 64.1 15 0.00032 33.8 5.4 37 150-192 45-81 (187)
42 PF08840 BAAT_C: BAAT / Acyl-C 64.0 15 0.00032 34.1 5.5 55 149-207 5-59 (213)
43 COG1506 DAP2 Dipeptidyl aminop 62.5 8.2 0.00018 41.8 3.9 39 147-185 454-492 (620)
44 COG2272 PnbA Carboxylesterase 62.0 9.2 0.0002 40.4 4.0 38 145-182 156-196 (491)
45 KOG1282 Serine carboxypeptidas 60.9 87 0.0019 33.0 10.9 143 45-203 56-209 (454)
46 cd07222 Pat_PNPLA4 Patatin-lik 60.8 8.8 0.00019 36.6 3.4 32 153-184 17-49 (246)
47 TIGR03712 acc_sec_asp2 accesso 59.3 5.8 0.00012 41.9 2.0 27 161-188 353-379 (511)
48 PLN02442 S-formylglutathione h 59.0 9.6 0.00021 36.8 3.4 22 164-185 141-162 (283)
49 TIGR03100 hydr1_PEP hydrolase, 58.4 18 0.00038 34.5 5.1 36 148-184 83-118 (274)
50 cd07218 Pat_iPLA2 Calcium-inde 58.3 12 0.00025 35.9 3.8 31 153-184 18-48 (245)
51 cd07204 Pat_PNPLA_like Patatin 57.5 12 0.00025 35.7 3.6 32 153-184 17-49 (243)
52 PLN02298 hydrolase, alpha/beta 56.9 32 0.0007 33.3 6.8 36 148-183 116-151 (330)
53 PLN03037 lipase class 3 family 56.0 35 0.00076 36.5 7.1 55 164-224 316-370 (525)
54 PF00450 Peptidase_S10: Serine 55.3 1.2E+02 0.0026 30.1 10.7 128 59-201 38-175 (415)
55 TIGR03101 hydr2_PEP hydrolase, 54.6 28 0.0006 33.7 5.8 61 149-223 85-145 (266)
56 PF12697 Abhydrolase_6: Alpha/ 54.3 45 0.00097 28.6 6.6 37 166-206 66-102 (228)
57 PRK11460 putative hydrolase; P 53.7 20 0.00043 33.5 4.5 34 150-183 87-120 (232)
58 PF12740 Chlorophyllase2: Chlo 51.7 18 0.00039 35.2 3.9 40 148-188 65-113 (259)
59 PF01738 DLH: Dienelactone hyd 50.6 21 0.00045 32.5 4.0 38 147-184 79-116 (218)
60 KOG1516 Carboxylesterase and r 50.5 24 0.00051 37.1 4.9 35 149-183 175-212 (545)
61 PF08237 PE-PPE: PE-PPE domain 49.1 51 0.0011 31.2 6.5 55 145-203 31-88 (225)
62 PLN02211 methyl indole-3-aceta 48.9 48 0.001 31.6 6.4 24 162-185 83-106 (273)
63 PLN00021 chlorophyllase 48.9 22 0.00048 35.2 4.1 39 150-188 102-148 (313)
64 PLN02324 triacylglycerol lipas 48.6 60 0.0013 33.8 7.3 36 153-189 202-238 (415)
65 KOG1553 Predicted alpha/beta h 48.6 47 0.001 34.1 6.3 76 142-227 287-364 (517)
66 KOG2237 Predicted serine prote 48.1 16 0.00036 39.8 3.2 35 145-179 528-562 (712)
67 KOG4569 Predicted lipase [Lipi 46.9 82 0.0018 31.5 7.9 69 149-225 156-225 (336)
68 TIGR03695 menH_SHCHC 2-succiny 46.8 42 0.00091 29.3 5.3 23 164-186 68-90 (251)
69 COG0412 Dienelactone hydrolase 46.7 30 0.00065 32.8 4.5 41 147-187 93-133 (236)
70 PRK05077 frsA fermentation/res 46.3 31 0.00067 35.4 4.9 35 149-183 248-282 (414)
71 PLN02965 Probable pheophorbida 46.2 50 0.0011 30.6 6.0 39 162-204 68-106 (255)
72 PF06028 DUF915: Alpha/beta hy 45.7 53 0.0012 31.7 6.1 61 145-209 84-146 (255)
73 PRK10673 acyl-CoA esterase; Pr 45.6 41 0.00089 30.6 5.2 35 166-204 81-115 (255)
74 COG4814 Uncharacterized protei 44.8 26 0.00056 34.4 3.7 45 147-193 119-165 (288)
75 TIGR03230 lipo_lipase lipoprot 44.8 56 0.0012 34.3 6.5 56 149-209 102-159 (442)
76 cd07207 Pat_ExoU_VipD_like Exo 44.7 27 0.00058 31.3 3.7 31 151-184 15-45 (194)
77 PRK10349 carboxylesterase BioH 43.9 55 0.0012 30.1 5.8 48 151-205 62-109 (256)
78 TIGR03056 bchO_mg_che_rel puta 43.1 61 0.0013 29.6 5.9 35 165-203 94-128 (278)
79 TIGR00976 /NonD putative hydro 42.4 33 0.00072 36.4 4.5 37 147-184 79-115 (550)
80 PLN02310 triacylglycerol lipas 42.0 79 0.0017 32.8 7.0 53 165-224 208-260 (405)
81 cd07220 Pat_PNPLA2 Patatin-lik 41.6 29 0.00063 33.4 3.6 31 153-183 22-53 (249)
82 TIGR01738 bioH putative pimelo 39.4 58 0.0013 28.5 5.0 50 150-206 52-101 (245)
83 TIGR03611 RutD pyrimidine util 39.2 44 0.00095 29.8 4.3 21 165-185 79-99 (257)
84 cd07230 Pat_TGL4-5_like Triacy 39.2 35 0.00075 35.4 4.0 30 153-185 91-120 (421)
85 PLN02894 hydrolase, alpha/beta 39.2 79 0.0017 32.2 6.5 22 165-186 175-196 (402)
86 PLN02571 triacylglycerol lipas 38.7 62 0.0013 33.7 5.6 40 151-190 208-250 (413)
87 PLN00413 triacylglycerol lipas 38.1 50 0.0011 35.0 4.8 36 152-189 272-307 (479)
88 TIGR02240 PHA_depoly_arom poly 37.6 54 0.0012 30.7 4.7 36 165-204 90-125 (276)
89 PRK15231 fimbrial adhesin prot 37.6 50 0.0011 29.4 4.1 62 45-114 78-139 (150)
90 KOG3101 Esterase D [General fu 37.5 14 0.0003 35.4 0.6 35 148-182 118-157 (283)
91 PF01734 Patatin: Patatin-like 37.0 26 0.00056 29.9 2.3 18 168-185 29-46 (204)
92 cd07205 Pat_PNPLA6_PNPLA7_NTE1 36.8 47 0.001 29.3 4.0 31 151-184 16-46 (175)
93 PLN02733 phosphatidylcholine-s 36.4 62 0.0013 33.8 5.3 34 149-184 147-180 (440)
94 cd07210 Pat_hypo_W_succinogene 36.2 43 0.00093 31.4 3.8 30 152-184 17-46 (221)
95 cd07228 Pat_NTE_like_bacteria 36.1 50 0.0011 29.4 4.0 28 153-183 18-45 (175)
96 PF06500 DUF1100: Alpha/beta h 36.0 41 0.00089 34.9 3.9 35 148-182 243-277 (411)
97 TIGR03739 PRTRC_D PRTRC system 35.9 63 0.0014 31.8 5.1 34 163-202 272-305 (320)
98 PLN02719 triacylglycerol lipas 34.4 74 0.0016 34.0 5.5 54 165-224 297-356 (518)
99 PRK00870 haloalkane dehalogena 34.3 1.2E+02 0.0026 28.7 6.7 36 166-205 115-150 (302)
100 COG1752 RssA Predicted esteras 33.7 44 0.00096 32.7 3.6 30 153-185 29-58 (306)
101 PLN02824 hydrolase, alpha/beta 33.4 1.2E+02 0.0025 28.6 6.4 34 166-203 102-135 (294)
102 COG4947 Uncharacterized protei 33.1 27 0.00059 32.5 1.8 15 167-181 102-116 (227)
103 KOG4389 Acetylcholinesterase/B 32.9 62 0.0013 34.6 4.5 124 119-247 137-299 (601)
104 PF05057 DUF676: Putative seri 32.2 40 0.00086 31.3 2.8 47 142-189 55-101 (217)
105 PLN02753 triacylglycerol lipas 32.0 86 0.0019 33.7 5.5 54 165-224 311-370 (531)
106 cd07209 Pat_hypo_Ecoli_Z1214_l 31.9 52 0.0011 30.5 3.6 29 153-184 16-44 (215)
107 TIGR02427 protocat_pcaD 3-oxoa 31.7 71 0.0015 28.0 4.3 21 165-185 78-98 (251)
108 PF01083 Cutinase: Cutinase; 31.7 2E+02 0.0042 26.0 7.2 40 145-186 62-101 (179)
109 cd01819 Patatin_and_cPLA2 Pata 31.5 65 0.0014 28.2 3.9 33 151-184 14-46 (155)
110 PLN02162 triacylglycerol lipas 30.9 97 0.0021 32.8 5.6 125 61-189 163-301 (475)
111 COG0627 Predicted esterase [Ge 30.6 1.5E+02 0.0034 29.5 6.9 35 167-206 153-187 (316)
112 cd07225 Pat_PNPLA6_PNPLA7 Pata 30.5 55 0.0012 32.4 3.6 32 152-186 32-63 (306)
113 PF03575 Peptidase_S51: Peptid 30.5 51 0.0011 28.8 3.1 11 168-178 70-80 (154)
114 PLN02934 triacylglycerol lipas 29.8 99 0.0022 33.1 5.5 38 150-189 307-344 (515)
115 PRK04940 hypothetical protein; 29.7 1E+02 0.0022 28.4 5.0 23 166-192 60-82 (180)
116 PF00151 Lipase: Lipase; Inte 29.7 93 0.002 31.2 5.1 56 151-210 135-193 (331)
117 PLN02847 triacylglycerol lipas 29.5 1.3E+02 0.0028 33.0 6.3 24 166-189 251-274 (633)
118 cd07206 Pat_TGL3-4-5_SDP1 Tria 29.4 66 0.0014 32.0 3.9 30 153-185 87-116 (298)
119 PRK10279 hypothetical protein; 29.4 59 0.0013 32.2 3.6 29 153-184 23-51 (300)
120 KOG3724 Negative regulator of 29.0 1.2E+02 0.0027 34.2 6.1 64 162-231 178-244 (973)
121 PRK13917 plasmid segregation p 28.9 1.3E+02 0.0028 30.1 6.1 27 162-193 289-315 (344)
122 cd07208 Pat_hypo_Ecoli_yjju_li 28.8 62 0.0013 30.7 3.6 30 152-183 15-44 (266)
123 PRK10749 lysophospholipase L2; 28.6 1.7E+02 0.0036 28.6 6.7 21 165-185 130-150 (330)
124 PF09752 DUF2048: Uncharacteri 28.6 1.1E+02 0.0025 31.1 5.5 43 151-200 163-206 (348)
125 cd07213 Pat17_PNPLA8_PNPLA9_li 28.6 86 0.0019 30.4 4.6 38 145-184 13-52 (288)
126 cd07221 Pat_PNPLA3 Patatin-lik 28.5 70 0.0015 30.7 3.9 32 153-184 18-50 (252)
127 PF04260 DUF436: Protein of un 28.2 65 0.0014 29.5 3.3 26 150-175 3-28 (172)
128 PF00091 Tubulin: Tubulin/FtsZ 27.8 2.7E+02 0.0059 25.7 7.6 49 146-194 103-156 (216)
129 cd07231 Pat_SDP1-like Sugar-De 27.6 74 0.0016 32.0 4.0 30 153-185 86-115 (323)
130 KOG1552 Predicted alpha/beta h 27.5 83 0.0018 30.7 4.1 41 147-192 112-152 (258)
131 cd07390 MPP_AQ1575 Aquifex aeo 26.9 74 0.0016 28.1 3.5 53 123-176 2-54 (168)
132 TIGR03343 biphenyl_bphD 2-hydr 26.8 88 0.0019 28.9 4.2 23 164-186 99-121 (282)
133 TIGR01392 homoserO_Ac_trn homo 26.6 1.5E+02 0.0033 29.1 6.0 38 166-207 126-164 (351)
134 PF05448 AXE1: Acetyl xylan es 26.5 53 0.0011 32.7 2.7 43 140-184 148-193 (320)
135 TIGR01836 PHA_synth_III_C poly 26.1 80 0.0017 31.1 4.0 34 149-184 121-154 (350)
136 PRK04123 ribulokinase; Provisi 26.1 1.4E+02 0.0031 31.5 6.1 72 117-197 378-469 (548)
137 COG2945 Predicted hydrolase of 26.1 76 0.0016 29.9 3.5 40 147-187 85-124 (210)
138 cd07219 Pat_PNPLA1 Patatin-lik 26.0 77 0.0017 32.7 3.8 16 169-184 47-62 (382)
139 PLN02872 triacylglycerol lipas 25.9 1.1E+02 0.0024 31.4 5.0 38 142-182 139-176 (395)
140 KOG2183 Prolylcarboxypeptidase 25.8 1E+02 0.0023 32.3 4.7 48 141-192 135-189 (492)
141 PRK11071 esterase YqiA; Provis 25.6 1.2E+02 0.0027 27.2 4.8 35 149-185 46-80 (190)
142 COG4099 Predicted peptidase [G 25.3 84 0.0018 31.7 3.8 43 149-191 252-294 (387)
143 PLN02761 lipase class 3 family 25.2 1.4E+02 0.0031 32.0 5.7 53 166-224 294-353 (527)
144 PTZ00472 serine carboxypeptida 25.2 8E+02 0.017 25.6 13.6 115 59-190 75-195 (462)
145 PF06821 Ser_hydrolase: Serine 25.1 1.7E+02 0.0037 26.2 5.6 35 148-185 40-74 (171)
146 PF11288 DUF3089: Protein of u 25.1 1E+02 0.0022 29.0 4.2 68 113-181 42-110 (207)
147 COG1075 LipA Predicted acetylt 24.8 1.5E+02 0.0033 29.5 5.7 44 142-192 106-149 (336)
148 PRK10985 putative hydrolase; P 24.8 1.2E+02 0.0025 29.6 4.8 33 148-182 115-147 (324)
149 KOG4391 Predicted alpha/beta h 24.6 30 0.00065 33.4 0.5 43 149-191 132-174 (300)
150 cd07227 Pat_Fungal_NTE1 Fungal 24.3 85 0.0018 30.5 3.7 31 153-186 28-58 (269)
151 PF00561 Abhydrolase_1: alpha/ 24.2 1.6E+02 0.0036 25.6 5.3 37 148-186 28-64 (230)
152 PLN03016 sinapoylglucose-malat 24.0 4E+02 0.0088 27.7 8.8 132 46-189 50-188 (433)
153 COG0031 CysK Cysteine synthase 23.8 2E+02 0.0044 28.7 6.2 57 141-205 238-295 (300)
154 PF02450 LCAT: Lecithin:choles 23.8 1.1E+02 0.0023 31.2 4.5 37 148-187 104-140 (389)
155 TIGR01250 pro_imino_pep_2 prol 23.7 2.3E+02 0.005 25.4 6.3 21 165-185 95-115 (288)
156 PF04631 Baculo_44: Baculoviru 23.7 45 0.00098 33.9 1.6 50 39-93 94-149 (371)
157 cd07232 Pat_PLPL Patain-like p 22.6 91 0.002 32.2 3.6 31 152-185 84-114 (407)
158 PLN02578 hydrolase 22.4 2.3E+02 0.0049 27.9 6.4 25 165-189 151-175 (354)
159 COG3458 Acetyl esterase (deace 22.3 2.6E+02 0.0057 27.9 6.5 49 128-179 135-189 (321)
160 PF11187 DUF2974: Protein of u 22.3 2.2E+02 0.0047 26.9 5.9 39 148-189 69-107 (224)
161 PRK13690 hypothetical protein; 22.2 1.2E+02 0.0025 28.1 3.8 28 148-175 8-35 (184)
162 PLN02385 hydrolase; alpha/beta 22.1 1.5E+02 0.0033 29.0 5.1 18 166-183 162-179 (349)
163 COG2382 Fes Enterochelin ester 22.0 1.3E+02 0.0028 30.0 4.4 66 142-212 147-218 (299)
164 cd07229 Pat_TGL3_like Triacylg 21.9 1E+02 0.0022 31.8 3.8 30 153-185 101-130 (391)
165 PRK03592 haloalkane dehalogena 21.8 2.7E+02 0.0059 26.1 6.6 34 166-203 93-126 (295)
166 COG1505 Serine proteases of th 21.6 43 0.00094 36.4 1.1 35 144-178 478-512 (648)
167 PRK11126 2-succinyl-6-hydroxy- 21.3 1.4E+02 0.0031 26.7 4.4 23 164-186 64-86 (242)
168 COG4188 Predicted dienelactone 21.2 1.1E+02 0.0023 31.5 3.7 34 149-182 135-175 (365)
169 PRK05579 bifunctional phosphop 21.0 2.3E+02 0.0051 29.1 6.3 78 114-201 143-235 (399)
170 PF08538 DUF1749: Protein of u 21.0 1.5E+02 0.0033 29.6 4.7 67 115-189 63-131 (303)
171 CHL00024 psbI photosystem II p 21.0 56 0.0012 22.3 1.1 12 100-111 21-32 (36)
172 TIGR01440 conserved hypothetic 20.8 1.1E+02 0.0024 28.0 3.3 27 149-175 2-28 (172)
173 PRK02655 psbI photosystem II r 20.7 57 0.0012 22.4 1.1 12 100-111 21-32 (38)
174 PF05577 Peptidase_S28: Serine 20.5 2.7E+02 0.0058 28.4 6.6 43 165-212 112-154 (434)
175 PF07224 Chlorophyllase: Chlor 20.4 1E+02 0.0023 30.5 3.3 36 149-185 95-139 (307)
176 PF12715 Abhydrolase_7: Abhydr 20.4 72 0.0016 32.9 2.3 56 144-206 202-259 (390)
177 cd07386 MPP_DNA_pol_II_small_a 20.3 2.9E+02 0.0063 25.7 6.4 32 146-177 15-48 (243)
178 PHA02857 monoglyceride lipase; 20.2 1.7E+02 0.0038 27.0 4.8 21 165-185 96-116 (276)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=8.2e-112 Score=816.81 Aligned_cols=353 Identities=57% Similarity=1.086 Sum_probs=335.7
Q ss_pred HHHHHHHHhhCCcceeeEEEeccccCCCccCCCCCCcEEEecCCCCCCccEEEEeeccccccChhhhhhccCCCCCCccc
Q 017366 13 LVCALILLKADGFNVGITYVENAVVKGAVCLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQ 92 (373)
Q Consensus 13 ~~~~~~~~~~~~~~~~lt~~~~a~~~ga~ClDGSp~~yy~~~g~g~~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~ 92 (373)
++...+.+......|++|+|+.|.++||+|||||+||||+.+|+|+|+++|||+|||||||.+..+|..|..|++|||++
T Consensus 24 lv~~~~~~~s~~~~v~ltli~~A~akGAvClDGSlpgYhl~~g~GSg~n~wliqlegGgwC~~i~sCv~Rk~tr~GSS~~ 103 (402)
T KOG4287|consen 24 LVFGSLVIGSPGLMVPLTLIRGAAAKGAVCLDGSLPGYHLHRGSGSGANNWLIQLEGGGWCNNIRSCVYRKMTRLGSSNY 103 (402)
T ss_pred hhhhhhcccCccccchhHHHhhHhhcCceecCCCCcceeeccCCCccccceeEecccccccccchhHHHHhhcccccccc
Confidence 33333334445589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCccccceEEEecCCCCccCCCcccccCCCceeEehHHHHHHHHHHHHHhCCCccCeEEEEe
Q 017366 93 MVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSG 172 (373)
Q Consensus 93 ~~~~~~~~Gils~~~~~NP~f~nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~v~lsG 172 (373)
|++++.|.||||+++++||||+|||+|+||||||++|+||.+.... ++++|||++||+|||++|+.+||.+|++.||+|
T Consensus 104 mek~~~FtGILS~k~~eNPdF~NWNrVkvRYCDGasFsGd~e~~~~-t~l~fRG~rIw~av~~eLl~kGms~Ak~alLsG 182 (402)
T KOG4287|consen 104 MEKELAFTGILSNKPSENPDFYNWNRVKVRYCDGASFSGDSENKNA-TQLQFRGARIWLAVMDELLAKGMSNAKQALLSG 182 (402)
T ss_pred chhhcceeEEecCCcccCCcccccceeEEeecCCCcccCcccccch-hhhhhhHHHHHHHHHHHHHHhhhhHHHHHHhhc
Confidence 9999999999999999999999999999999999999998764333 399999999999999999999999999999999
Q ss_pred eChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHHhcCCCCCCChhhhccCCCcc-----
Q 017366 173 CSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAKHLPASCTSRLSPGL----- 247 (373)
Q Consensus 173 ~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~v~~~~~~~~~lp~~C~~~~~p~~----- 247 (373)
|||||+|+++|+|+||++||++++|+||+|||||||.+|++|...++.+|.+||++||++++||+.|++.+.|..
T Consensus 183 cSAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k~Lp~~Ct~~~~p~~CfFpq 262 (402)
T KOG4287|consen 183 CSAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQKNLPQSCTSHLEPSLCFFPQ 262 (402)
T ss_pred CCccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccccCCHHHHhcCCchhhcchH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887754
Q ss_pred ---------------------cccccCCCCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCCceEEec
Q 017366 248 ---------------------IKNILAPGVADPHGTWHSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRGMFID 306 (373)
Q Consensus 248 ---------------------i~~il~p~~~d~~~~W~~C~~~~~~C~~~q~~~iq~fr~~~l~~l~~~~~~~~~G~Fi~ 306 (373)
|++.++|+.+|+.+.|..|+.++..|++.||+++|+||.+|+.++..+.++...|+||+
T Consensus 263 ~v~~~irtP~F~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~~ml~a~~~f~~~~~~g~fin 342 (402)
T KOG4287|consen 263 YVLKTIRTPVFLVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRPQMLDAVKIFSSSKQNGLFIN 342 (402)
T ss_pred HHHhhcCCceEehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHHHHHHHhhhheecccCCeeec
Confidence 88999999999999999999999999999999999999999999999988899999999
Q ss_pred CcccccccccccccccCCCcccCCchHHHhhcccccCCCccccccCCCCCCCCCCCCCCC
Q 017366 307 ACYAHCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKIDCAYPCNPTCHNRVFD 366 (373)
Q Consensus 307 SC~~Hc~~~~~~~W~~~~~p~i~g~Ti~~Av~dW~~~r~~~~~iDc~yPcNptC~~~~~~ 366 (373)
||++|||.+.+++|+++++|++++|||++||+||||+|..+|+|||||||||||+|+.+.
T Consensus 343 sc~aHCq~~~~~tW~~~~sp~i~~k~iA~aVgdWyf~R~~vklIDCPyPCn~tC~nl~~~ 402 (402)
T KOG4287|consen 343 SCFAHCQTERQDTWFADDSPAIKNKTIAEAVGDWYFDRAKVKLIDCPYPCNPTCHNLSFE 402 (402)
T ss_pred hHHHhhcccccccccCCCCccccCchhhhhhcceecccceeeeccCCCCCCCCCccccCC
Confidence 999999999999999999999999999999999999998899999999999999999863
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=1.8e-96 Score=733.37 Aligned_cols=338 Identities=48% Similarity=0.901 Sum_probs=314.1
Q ss_pred HHHHHHHHhhCCcceeeEEEeccccCCCccCCCCCCcEEEecCCCCCCccEEEEeeccccccChhhhhhccCCCCCCccc
Q 017366 13 LVCALILLKADGFNVGITYVENAVVKGAVCLDGSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQ 92 (373)
Q Consensus 13 ~~~~~~~~~~~~~~~~lt~~~~a~~~ga~ClDGSp~~yy~~~g~g~~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~ 92 (373)
|+|+++...++...++||+|++|++++|+|+||||++||+|+|+|++++||||||||||||||.++|..|..|.+|||+.
T Consensus 2 ~~~~~~~~~~~~~~~~l~~l~~~~~~~a~C~DGS~~~yy~~~g~g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~ 81 (361)
T PF03283_consen 2 LICLLVASNAQSDEVKLTLLDDAVDTGAVCLDGSPPGYYFRPGSGSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKN 81 (361)
T ss_pred eEEEeeeccccccccceEEecCCCCCCCCcCCCCCCcEEEccCCCCCCceEEEEeccchhcCChhHHhhhccCccccccc
Confidence 34555555667889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCCCCCCCccccceEEEecCCCCccCCCccc-ccCCCceeEehHHHHHHHHHHHHHhCCCccCeEEEE
Q 017366 93 MVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCDGASFTGDVEA-VNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLS 171 (373)
Q Consensus 93 ~~~~~~~~Gils~~~~~NP~f~nwN~V~vpYCdGd~~~G~~~~-~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~v~ls 171 (373)
|++.+.+.|||++++++||+|+|||+|||||||||+|+|+++. .+++.++||||++|++|||+||+++||++|++|||+
T Consensus 82 ~~~~~~~~Gils~~~~~Np~f~~wN~V~vpYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~a~~vllt 161 (361)
T PF03283_consen 82 WPKTFAFSGILSNDPAENPDFYNWNHVFVPYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPNAKQVLLT 161 (361)
T ss_pred hhhhccccccccCCcccCCccccccEEEEEecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcccceEEEe
Confidence 9999999999999999999999999999999999999998773 456789999999999999999999899999999999
Q ss_pred eeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHHhcCCCCCCChhhhccCCCc-----
Q 017366 172 GCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAKHLPASCTSRLSPG----- 246 (373)
Q Consensus 172 G~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~v~~~~~~~~~lp~~C~~~~~p~----- 246 (373)
||||||+||++|+|+||++||+.++|++++|||||+|.++++|...++.++..++++|+.++.+|++|++.++|+
T Consensus 162 G~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~C~~~~~~~C~f~q 241 (361)
T PF03283_consen 162 GCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSKSLPESCVAQYDPECFFPQ 241 (361)
T ss_pred ccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhccCCHhHHhccCccccchH
Confidence 999999999999999999999889999999999999999999999999999999999999999999998866442
Q ss_pred -ccccccCCC--CCCCCCCc-------------ccccCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCCceEEecCccc
Q 017366 247 -LIKNILAPG--VADPHGTW-------------HSCKLDINNCSPTQLQTMQSFRTQFLNALAGLGISSSRGMFIDACYA 310 (373)
Q Consensus 247 -~i~~il~p~--~~d~~~~W-------------~~C~~~~~~C~~~q~~~iq~fr~~~l~~l~~~~~~~~~G~Fi~SC~~ 310 (373)
.+++|.+|. +++.||.| .+|+.++.+|+++||++||+||++|+++|+++.+++++|+||+||++
T Consensus 242 ~~~~~I~tPlFivns~YD~wQl~~il~p~~~~w~~c~~~~~~Cs~~Ql~~lq~fr~~~~~aL~~~~~~~~~G~Fi~SC~~ 321 (361)
T PF03283_consen 242 YLYPYIKTPLFIVNSLYDSWQLQNILVPPSGSWISCKNDLPPCSPSQLDYLQGFRSEMLDALKNVSNSPNWGVFIPSCFA 321 (361)
T ss_pred HHHhhcCcceeeehhhhCHHHhhcccCCCcccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCCeEECccchh
Confidence 277777776 35566655 46998999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCCcccCCchHHHhhcccccCCCccccc
Q 017366 311 HCQTEMQETWLRTDSPVLGKMSIAKAVGDWYYDRSPFQKI 350 (373)
Q Consensus 311 Hc~~~~~~~W~~~~~p~i~g~Ti~~Av~dW~~~r~~~~~i 350 (373)
|||++.+++|+.+.+|+|+|+||+|||+||||+|+.+|.|
T Consensus 322 Hcq~~~~~~W~~~~~p~v~g~tia~Av~dW~~~r~~~~~~ 361 (361)
T PF03283_consen 322 HCQSESSDTWNSPDSPRVNGKTIAEAVGDWYFSRSEVKKI 361 (361)
T ss_pred hcccccCCcccCCCcccCCCEEHHHHHHHHHhcccccccC
Confidence 9999998899988899999999999999999999987765
No 3
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=95.49 E-value=0.072 Score=53.48 Aligned_cols=47 Identities=17% Similarity=0.135 Sum_probs=32.5
Q ss_pred eEehHHHHHHHHHH-HHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhh
Q 017366 143 HFRGARVFQAVMED-LMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRAL 190 (373)
Q Consensus 143 ~frG~~n~~avl~~-l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~ 190 (373)
|.-|-.-++-+++. ++. --.++++|+|+|.||||--|..-+.++++-
T Consensus 143 y~D~~~Al~w~~~~~~~~-~~~D~~rv~l~GDSaGGNia~~va~r~~~~ 190 (336)
T KOG1515|consen 143 YDDGWAALKWVLKNSWLK-LGADPSRVFLAGDSAGGNIAHVVAQRAADE 190 (336)
T ss_pred chHHHHHHHHHHHhHHHH-hCCCcccEEEEccCccHHHHHHHHHHHhhc
Confidence 33445555555552 221 246788899999999999888888888863
No 4
>PRK10162 acetyl esterase; Provisional
Probab=94.74 E-value=0.12 Score=50.88 Aligned_cols=44 Identities=18% Similarity=0.117 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHh--CCC-ccCeEEEEeeChhhHHHHHhhHHHHhh
Q 017366 147 ARVFQAVMEDLMAK--GMK-NAQNAVLSGCSAGGLTSILHCDNFRAL 190 (373)
Q Consensus 147 ~~n~~avl~~l~~~--~l~-~a~~v~lsG~SAGGlga~~~~d~v~~~ 190 (373)
.....++++|+.+. .+. ++++|+|.|.||||.-|+.-+-.+++.
T Consensus 132 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 132 IEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred HHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 45677788888752 243 678999999999999988877777654
No 5
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=93.39 E-value=0.072 Score=48.53 Aligned_cols=39 Identities=21% Similarity=0.244 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
..-+.+++++|.+++.-++++|.|.|.|+||+.|.+-+-
T Consensus 45 ~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~ 83 (213)
T PF00326_consen 45 VDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAAT 83 (213)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhccccccceeEEEEcccccccccchhhc
Confidence 445677889998877789999999999999999987655
No 6
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=93.03 E-value=0.8 Score=46.71 Aligned_cols=109 Identities=19% Similarity=0.259 Sum_probs=62.5
Q ss_pred cEEEecC-C--CCCCccEEEEeeccccccChhhhhhccCCCCCCccccccccccccccCCCCCCCCCccccceEEEecCC
Q 017366 49 AYHFDKG-F--GAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFYNWNRIKVRYCD 125 (373)
Q Consensus 49 ~yy~~~g-~--g~~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~~~~~~~~~Gils~~~~~NP~f~nwN~V~vpYCd 125 (373)
+|++.+. . ...++..||||=|||++.....+.-.... ...-.|. + . .++.+-|=-
T Consensus 107 s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~------------~i~~~l~-----~--~---SILvLDYsL 164 (374)
T PF10340_consen 107 SYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLL------------NIYKLLP-----E--V---SILVLDYSL 164 (374)
T ss_pred eEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHH------------HHHHHcC-----C--C---eEEEEeccc
Confidence 4777763 1 23468999999999999876555432110 0011111 0 1 566666632
Q ss_pred CCccCCCcccccCCCceeEehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 017366 126 GASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 126 Gd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
-.+ ++....|+ .+ ..-+-++.+.|.+. ...+.|+|.|.||||--++.-..+++.
T Consensus 165 t~~--~~~~~~yP-tQ-----L~qlv~~Y~~Lv~~--~G~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 165 TSS--DEHGHKYP-TQ-----LRQLVATYDYLVES--EGNKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred ccc--ccCCCcCc-hH-----HHHHHHHHHHHHhc--cCCCeEEEEecCccHHHHHHHHHHHhh
Confidence 210 01111122 11 22344556778731 235789999999999998888888877
No 7
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=91.93 E-value=0.5 Score=48.70 Aligned_cols=96 Identities=18% Similarity=0.170 Sum_probs=59.7
Q ss_pred ehHHHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHHhhHHHH--hhCCCCcEEEEeeccccccccCCCCchhHHH
Q 017366 145 RGARVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHCDNFR--ALFPVGTKVKCFADAGYFINAKDVSGASHIE 219 (373)
Q Consensus 145 rG~~n~~avl~~l~~~--~l-~~a~~v~lsG~SAGGlga~~~~d~v~--~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~ 219 (373)
.|..-.+++|+|+.++ .| +++++|.|.|.||||..+.+|.-.=. .+|. ++|.-||-.+......... +
T Consensus 184 ~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~-----raI~~SGs~~~~~~~~~~~--~ 256 (535)
T PF00135_consen 184 YGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFH-----RAILQSGSALSPWATSENP--E 256 (535)
T ss_dssp HHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBS-----EEEEES--TTSTTSSBSHH--H
T ss_pred hhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccc-----ccccccccccccccccccc--c
Confidence 3677788999999973 56 48999999999999999888765521 2232 5566666433222222222 4
Q ss_pred HHHHHHHHhcCCCCCCC---hhhhccCCCcc
Q 017366 220 QFYAQVVATHGSAKHLP---ASCTSRLSPGL 247 (373)
Q Consensus 220 ~~~~~v~~~~~~~~~lp---~~C~~~~~p~~ 247 (373)
..+..+++.-|+...-. -+|.+..+...
T Consensus 257 ~~~~~la~~lgc~~~~~~~~l~cLR~~~~~~ 287 (535)
T PF00135_consen 257 QQAQKLAKALGCDDSDSSDILECLRSLPAEE 287 (535)
T ss_dssp HHHHHHHHHTTSTTSSHHHHHHHHHHS-HHH
T ss_pred hhhhhhhhhhccccccccchhhhhhhhhccc
Confidence 56677776666654332 25887665443
No 8
>PRK10566 esterase; Provisional
Probab=90.23 E-value=0.64 Score=42.95 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~ 183 (373)
-+.+++++|.+++.-+.++|.|.|.|+||+-++..
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~ 124 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGI 124 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHH
Confidence 34567788876555678999999999999999854
No 9
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=89.51 E-value=0.73 Score=47.65 Aligned_cols=93 Identities=14% Similarity=0.203 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHHhhHH--HHhhCCCCcEEEEeeccccccccCCCCchhHHHH
Q 017366 146 GARVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHCDN--FRALFPVGTKVKCFADAGYFINAKDVSGASHIEQ 220 (373)
Q Consensus 146 G~~n~~avl~~l~~~--~l-~~a~~v~lsG~SAGGlga~~~~d~--v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~ 220 (373)
|..-..++|+|+.++ .+ .++++|.|.|.||||..+.++.-. .+.++. +++.-||........ ....+.
T Consensus 153 g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~-----~~i~~sg~~~~~~~~--~~~~~~ 225 (493)
T cd00312 153 GLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFH-----RAISQSGSALSPWAI--QENARG 225 (493)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHH-----HHhhhcCCccCcccc--cccHHH
Confidence 667888999999863 33 589999999999999888776543 222332 344556644322111 111133
Q ss_pred HHHHHHHhcCCCCCCC---hhhhccCCC
Q 017366 221 FYAQVVATHGSAKHLP---ASCTSRLSP 245 (373)
Q Consensus 221 ~~~~v~~~~~~~~~lp---~~C~~~~~p 245 (373)
....+.+..|+...-+ -+|.+..+.
T Consensus 226 ~~~~~~~~lgc~~~~~~~~l~cLr~~~~ 253 (493)
T cd00312 226 RAKRLARLLGCNDTSSAELLDCLRSKSA 253 (493)
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHhcCCH
Confidence 3444555555543211 258766543
No 10
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=88.88 E-value=0.72 Score=41.54 Aligned_cols=43 Identities=23% Similarity=0.213 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHHhhHHHHhh
Q 017366 148 RVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILHCDNFRAL 190 (373)
Q Consensus 148 ~n~~avl~~l~~~--~l-~~a~~v~lsG~SAGGlga~~~~d~v~~~ 190 (373)
.-+.++++|++++ .+ -++++|+|+|.||||.=++.-+-..++.
T Consensus 50 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 50 EDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp HHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred cccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhh
Confidence 4567788888863 11 3588999999999999888888877775
No 11
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=86.55 E-value=3.6 Score=43.43 Aligned_cols=139 Identities=15% Similarity=0.131 Sum_probs=81.0
Q ss_pred CcEEEecCC-CCCCccEEEEeeccccccChhhhhhccCCCCCCccccccccccccccCCCCCCCCCcc--ccceEEE--e
Q 017366 48 PAYHFDKGF-GAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV--R 122 (373)
Q Consensus 48 ~~yy~~~g~-g~~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v--p 122 (373)
+.||..++. ....+-+++.|.||=-|-+..-=. ..+|. ..+.++ . ++....||+=+ +-+.||| |
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l----~elGP-----~rI~~~-~-~P~~~~NP~SW~~~adLvFiDqP 155 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLL----GELGP-----KRIQSG-T-SPSYPDNPGSWLDFADLVFIDQP 155 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhh----hhcCC-----eeeeCC-C-CCCCCCCccccccCCceEEEecC
Confidence 445666663 233578999999999887654221 12332 112221 1 33333688433 4579999 5
Q ss_pred cCCCCccC-CCccccc---CCCceeEehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhh---CCCCc
Q 017366 123 YCDGASFT-GDVEAVN---PANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRAL---FPVGT 195 (373)
Q Consensus 123 YCdGd~~~-G~~~~~~---~~~~l~frG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~---lp~~~ 195 (373)
-=||-+.+ |+.-..+ -+..+ +...+-+++++-. ..+......|+|.|-||.=...-+..|.+. +...+
T Consensus 156 vGTGfS~a~~~e~~~d~~~~~~D~----~~~~~~f~~~fp~-~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~ 230 (498)
T COG2939 156 VGTGFSRALGDEKKKDFEGAGKDV----YSFLRLFFDKFPH-YARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNV 230 (498)
T ss_pred cccCcccccccccccchhccchhH----HHHHHHHHHHHHH-HhhhcCceeEeeccccchhhHHHHHHHHHhccccCCce
Confidence 66776665 3321100 01111 2345556666653 456667899999999998877777777774 33445
Q ss_pred EEEEeec
Q 017366 196 KVKCFAD 202 (373)
Q Consensus 196 ~v~~l~D 202 (373)
.+..+.+
T Consensus 231 nlssvli 237 (498)
T COG2939 231 NLSSVLI 237 (498)
T ss_pred Eeeeeee
Confidence 5665555
No 12
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=83.75 E-value=1.5 Score=40.09 Aligned_cols=37 Identities=16% Similarity=0.249 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
..++.+++++.++.--++++|+|.|.|+||..++..+
T Consensus 77 ~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 77 ESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred HHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHH
Confidence 4567788888864334668999999999999876644
No 13
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=83.65 E-value=3.8 Score=34.47 Aligned_cols=54 Identities=24% Similarity=0.439 Sum_probs=31.5
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCC-CcEEEEeeccccccccCCCCchhHHHHHHHH
Q 017366 165 AQNAVLSGCSAGGLTSILHCDNFRALFPV-GTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~v~~~lp~-~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (373)
..+|+++|+|-||-=|.+-+-++.+..+. ..++++++=+++-+ |+..+...++.
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~------~~~~~~~~~~~ 117 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV------GNSAFAKWYDS 117 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--------BEHHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc------cCHHHHHHHHh
Confidence 38899999999997555555555554432 34566666554332 34444455553
No 14
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=83.31 E-value=1.7 Score=36.07 Aligned_cols=40 Identities=28% Similarity=0.434 Sum_probs=30.1
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 145 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
.+...++.+++++.. ...++++|+|.|.|+||..+..-..
T Consensus 41 ~~~~~~~~~~~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 41 DGADAVERVLADIRA-GYPDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp HHSHHHHHHHHHHHH-HHCTCCEEEEEEETHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHh-hcCCCCcEEEEEEccCcHHHHHHhh
Confidence 344478888888753 2348999999999999997776544
No 15
>PRK10115 protease 2; Provisional
Probab=83.07 E-value=0.87 Score=49.91 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHH
Q 017366 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSIL 182 (373)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~ 182 (373)
..-+.++.++|+++|+-++++|.+.|.||||+-+..
T Consensus 505 ~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~ 540 (686)
T PRK10115 505 FNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGV 540 (686)
T ss_pred HHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHH
Confidence 556778889999999999999999999999986543
No 16
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=82.92 E-value=2.6 Score=40.83 Aligned_cols=42 Identities=21% Similarity=0.140 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhC--C-CccCeEEEEeeChhhHHHHHhhHHHHhh
Q 017366 149 VFQAVMEDLMAKG--M-KNAQNAVLSGCSAGGLTSILHCDNFRAL 190 (373)
Q Consensus 149 n~~avl~~l~~~~--l-~~a~~v~lsG~SAGGlga~~~~d~v~~~ 190 (373)
-+.+++.|+.++. + -++++|+|+|+||||.=+..-+...++.
T Consensus 132 d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 132 DAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred HHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhc
Confidence 3667788888532 3 3689999999999999999999999986
No 17
>PLN02408 phospholipase A1
Probab=80.70 E-value=9.5 Score=38.91 Aligned_cols=64 Identities=14% Similarity=0.232 Sum_probs=41.2
Q ss_pred HHHHHHhCCCc-cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 017366 154 MEDLMAKGMKN-AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (373)
Q Consensus 154 l~~l~~~~l~~-a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (373)
|..|++ ..++ ...|+++|+|-||-=|.+.+-+++..++....|.++.=++. --|+..+.++++.
T Consensus 188 I~~ll~-~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsP------RVGN~~Fa~~~~~ 252 (365)
T PLN02408 188 IARLLQ-SYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGP------RVGNRSFRRQLEK 252 (365)
T ss_pred HHHHHH-hcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCC------CcccHHHHHHHHh
Confidence 344443 2443 34799999999999999999999988764334555554442 2355555555543
No 18
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=78.61 E-value=5 Score=40.62 Aligned_cols=53 Identities=23% Similarity=0.316 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhC-CCccCeEEEEeeChhhHHHHHhhHHHHhh-C--CCCcEEEEeecccc
Q 017366 150 FQAVMEDLMAKG-MKNAQNAVLSGCSAGGLTSILHCDNFRAL-F--PVGTKVKCFADAGY 205 (373)
Q Consensus 150 ~~avl~~l~~~~-l~~a~~v~lsG~SAGGlga~~~~d~v~~~-l--p~~~~v~~l~DSG~ 205 (373)
.+|+++.|.++. =.+|+++++-|.|-||.=+. ..+++. + ..+++..++.|-||
T Consensus 198 ~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa---~AL~~~~~~~~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 198 YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQA---EALKKEVLKGSDGIRWFLIKDRSF 254 (365)
T ss_pred HHHHHHHHHhcccCCChheEEEeeccccHHHHH---HHHHhcccccCCCeeEEEEecCCc
Confidence 567788888632 35899999999999985322 233332 2 12577778888876
No 19
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=77.54 E-value=7.3 Score=36.84 Aligned_cols=41 Identities=17% Similarity=0.317 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCC
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPV 193 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~ 193 (373)
.+.++++++..+.--++++|.++|.|+||.-+. .+.-.+|+
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~----~la~~~pd 120 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMAN----VLACAYPD 120 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHH----HHHHhCCc
Confidence 477888888864434889999999999996664 34445564
No 20
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=77.05 E-value=5.9 Score=38.28 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccccccc
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINA 209 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~ 209 (373)
.+.++|+.|.+..--..++|.|.|+|.||.-+.+-+..+.+++ .++.+|.=+|.++..
T Consensus 95 ~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~v---~~iv~LDPa~p~f~~ 152 (275)
T cd00707 95 ELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGKL---GRITGLDPAGPLFSG 152 (275)
T ss_pred HHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCcc---ceeEEecCCcccccC
Confidence 3455666666531124678999999999998887776655443 235555546665443
No 21
>PRK13604 luxD acyl transferase; Provisional
Probab=75.64 E-value=5.8 Score=39.52 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 017366 146 GARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (373)
Q Consensus 146 G~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (373)
|..-+.++++||+++ ..++|.|.|+|.||.-+++-+. .-+ +. .++.|||+.
T Consensus 91 g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~----~~~--v~-~lI~~sp~~ 141 (307)
T PRK13604 91 GKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVIN----EID--LS-FLITAVGVV 141 (307)
T ss_pred cHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhc----CCC--CC-EEEEcCCcc
Confidence 678899999999874 3467999999999988655432 111 21 277888875
No 22
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=74.70 E-value=3.4 Score=38.23 Aligned_cols=43 Identities=16% Similarity=0.291 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhCCCcc-CeEEEEeeChhhHHHHHhhHHHHhhC
Q 017366 148 RVFQAVMEDLMAKGMKNA-QNAVLSGCSAGGLTSILHCDNFRALF 191 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a-~~v~lsG~SAGGlga~~~~d~v~~~l 191 (373)
-+.++++.++.+ .++.. ++..|+|+|.||++|+..+=.--+.|
T Consensus 97 ~l~~el~p~i~~-~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F 140 (251)
T PF00756_consen 97 FLTEELIPYIEA-NYRTDPDRRAIAGHSMGGYGALYLALRHPDLF 140 (251)
T ss_dssp HHHTHHHHHHHH-HSSEEECCEEEEEETHHHHHHHHHHHHSTTTE
T ss_pred ehhccchhHHHH-hcccccceeEEeccCCCcHHHHHHHHhCcccc
Confidence 344555555554 45533 33999999999999997554433444
No 23
>PLN02802 triacylglycerol lipase
Probab=72.43 E-value=12 Score=39.77 Aligned_cols=52 Identities=19% Similarity=0.286 Sum_probs=36.8
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHH
Q 017366 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYA 223 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~ 223 (373)
.+|+|+|+|-||-=|.+.+.+++...+....|.++.=++. --|+..+.++++
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsP------RVGN~aFA~~~~ 381 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGP------RVGNRAFADRLN 381 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCC------CcccHHHHHHHH
Confidence 4799999999999999999999988765334555554432 335555555553
No 24
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=72.15 E-value=4.8 Score=38.49 Aligned_cols=23 Identities=17% Similarity=0.339 Sum_probs=19.5
Q ss_pred ccCeEEEEeeChhhHHHHHhhHH
Q 017366 164 NAQNAVLSGCSAGGLTSILHCDN 186 (373)
Q Consensus 164 ~a~~v~lsG~SAGGlga~~~~d~ 186 (373)
+.+++.|+|.|+||+.|+..+-.
T Consensus 136 ~~~~~~~~G~S~GG~~a~~~a~~ 158 (275)
T TIGR02821 136 DGERQGITGHSMGGHGALVIALK 158 (275)
T ss_pred CCCceEEEEEChhHHHHHHHHHh
Confidence 56789999999999999877654
No 25
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=71.35 E-value=8.9 Score=35.13 Aligned_cols=55 Identities=16% Similarity=0.297 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccccccc
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINA 209 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~ 209 (373)
.+.++|+.+.+.+ -++++|+|.|.|-||.-|+.-+=.-...+ . -++.=||+++..
T Consensus 89 ~l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~---~--gvv~lsG~~~~~ 143 (216)
T PF02230_consen 89 RLDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPL---A--GVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTS---S--EEEEES---TTG
T ss_pred HHHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCc---C--EEEEeecccccc
Confidence 3455566555544 67789999999999988877553332322 2 233445776544
No 26
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=70.55 E-value=6.7 Score=31.30 Aligned_cols=34 Identities=26% Similarity=0.473 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHh-CCCccCeEEEEeeChh-hHHH
Q 017366 147 ARVFQAVMEDLMAK-GMKNAQNAVLSGCSAG-GLTS 180 (373)
Q Consensus 147 ~~n~~avl~~l~~~-~l~~a~~v~lsG~SAG-Glga 180 (373)
+++++.-+++..++ .+..+++||+.|+|.| |+++
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAs 55 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLAS 55 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHH
Confidence 56788888888873 4677899999999998 5443
No 27
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=70.45 E-value=4.4 Score=44.07 Aligned_cols=33 Identities=30% Similarity=0.418 Sum_probs=29.7
Q ss_pred hHHHHHHHHHHHHHhCCCccCeEEEEeeChhhH
Q 017366 146 GARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGL 178 (373)
Q Consensus 146 G~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGl 178 (373)
...-+-|+-+.|...|+...++++..|.||||+
T Consensus 507 Tf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGm 539 (682)
T COG1770 507 TFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGM 539 (682)
T ss_pred cHHHHHHHHHHHHHcCcCCccceEEeccCchhH
Confidence 456778889999999999999999999999996
No 28
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=70.34 E-value=14 Score=34.16 Aligned_cols=39 Identities=23% Similarity=0.343 Sum_probs=29.2
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccc
Q 017366 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 204 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG 204 (373)
..+|+|+|+|-||-=|.+.+-.++...+ ..++.++.=++
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~-~~~i~~~tFg~ 165 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGP-GSDVTVYTFGQ 165 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCC-CCceEEEEeCC
Confidence 4679999999999988888888887763 24466665444
No 29
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=68.90 E-value=27 Score=32.84 Aligned_cols=36 Identities=17% Similarity=0.287 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHh---CCCccCeEEEEeeChhhHHHHHhh
Q 017366 149 VFQAVMEDLMAK---GMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 149 n~~avl~~l~~~---~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
-+...++.+++. ....++.|+|.|+|.||+-+..-.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSAL 103 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHH
Confidence 344555555542 347889999999999998765443
No 30
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=68.54 E-value=5.7 Score=37.53 Aligned_cols=32 Identities=31% Similarity=0.495 Sum_probs=23.8
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
|++.|.++|+.. +...++|.|||++-+.+++-
T Consensus 17 Vl~~L~e~gi~~-~~~~i~G~SAGAl~aa~~as 48 (233)
T cd07224 17 VLSLLIEAGVIN-ETTPLAGASAGSLAAACSAS 48 (233)
T ss_pred HHHHHHHcCCCC-CCCEEEEEcHHHHHHHHHHc
Confidence 567888777652 34589999999998777654
No 31
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=68.00 E-value=13 Score=35.58 Aligned_cols=66 Identities=21% Similarity=0.253 Sum_probs=43.1
Q ss_pred CCccCeEEEEeeChhhHHHHHhhHHHHhhCC------CCcEEEEee-ccccccccCCCCchhHHHHHHHHHHH
Q 017366 162 MKNAQNAVLSGCSAGGLTSILHCDNFRALFP------VGTKVKCFA-DAGYFINAKDVSGASHIEQFYAQVVA 227 (373)
Q Consensus 162 l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp------~~~~v~~l~-DSG~fld~~~~~g~~~~~~~~~~v~~ 227 (373)
...++.|+++|||-||+|--+--..-++-+. +--+..-|. |+|++.-.-|++-.+.+..+-.+|..
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 4678899999999999997665554444221 001122233 88988776777767777777777654
No 32
>PLN02454 triacylglycerol lipase
Probab=67.32 E-value=19 Score=37.32 Aligned_cols=64 Identities=16% Similarity=0.192 Sum_probs=39.3
Q ss_pred HHHHHHhCCCccC-eEEEEeeChhhHHHHHhhHHHHhhCC--CCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 017366 154 MEDLMAKGMKNAQ-NAVLSGCSAGGLTSILHCDNFRALFP--VGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (373)
Q Consensus 154 l~~l~~~~l~~a~-~v~lsG~SAGGlga~~~~d~v~~~lp--~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (373)
|+.|++ ..++.+ .|+++|+|-||--|.+.+.+++.... ....|.++.=++. .-|+..+.++++.
T Consensus 216 V~~l~~-~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsP------RVGN~~Fa~~~~~ 282 (414)
T PLN02454 216 IKELLE-RYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSP------QVGNKEFNDRFKE 282 (414)
T ss_pred HHHHHH-hCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCC------cccCHHHHHHHHh
Confidence 344444 244443 69999999999999999988876532 2234555544432 2355555555554
No 33
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=66.73 E-value=6.7 Score=34.88 Aligned_cols=31 Identities=26% Similarity=0.422 Sum_probs=23.5
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 152 avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
-|++.|.++|+. --+++|+|||++-+.+++-
T Consensus 15 Gvl~aL~e~gi~---~d~v~GtSaGAi~aa~~a~ 45 (172)
T cd07198 15 GVAKALRERGPL---IDIIAGTSAGAIVAALLAS 45 (172)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHc
Confidence 356777777776 5689999999998776554
No 34
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=66.43 E-value=11 Score=36.89 Aligned_cols=48 Identities=17% Similarity=0.248 Sum_probs=33.5
Q ss_pred CCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcE--EEEeecccccccc
Q 017366 161 GMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTK--VKCFADAGYFINA 209 (373)
Q Consensus 161 ~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~--v~~l~DSG~fld~ 209 (373)
|++...+|++.|.|=||.+|..-+ .++..+-++.+ +...+=.|+-.|.
T Consensus 66 gl~~~~~v~l~GySqGG~Aa~~AA-~l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 66 GLSPSSRVALWGYSQGGQAALWAA-ELAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred CCCCCCCEEEEeeCccHHHHHHHH-HHhHHhCcccccceeEEeccCCccCH
Confidence 566678999999999999997554 55555544566 6666655554443
No 35
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=66.32 E-value=78 Score=31.62 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 150 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 150 ~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
++++++.|+.+.=-++.+|.++|-|+||.=+..-.
T Consensus 128 lr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~la 162 (312)
T COG3509 128 LRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLA 162 (312)
T ss_pred HHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHH
Confidence 67778888865334788999999999996544433
No 36
>PLN02209 serine carboxypeptidase
Probab=66.02 E-value=70 Score=33.34 Aligned_cols=144 Identities=12% Similarity=0.089 Sum_probs=69.7
Q ss_pred CCCcEEEecCC-CCCCccEEEEeeccccccChhhhhhccCCCCCCccccccccccccccCCCCCCCCCcc--ccceEEE-
Q 017366 46 SPPAYHFDKGF-GAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV- 121 (373)
Q Consensus 46 Sp~~yy~~~g~-g~~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v- 121 (373)
+-..|+|-+.- ....+-++|.|+||=-|-+..-... .+|.-..-++ ...|-. ..-..||+-+ ..|+|||
T Consensus 52 ~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~----e~GP~~~~~~--~~~~~~-~~l~~n~~sW~~~anllfiD 124 (437)
T PLN02209 52 VQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFF----ENGPLALKNK--VYNGSV-PSLVSTTYSWTKTANIIFLD 124 (437)
T ss_pred eEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHH----hcCCceeccC--CCCCCc-ccceeCCCchhhcCcEEEec
Confidence 33445554332 2234689999999976666443222 2232111000 000100 1234566332 4578888
Q ss_pred -ecCCCCccCCCcccccCCCceeEehHHHHHHHHHHHHHhCCCc--cCeEEEEeeChhhHHHHHhhHHHHhhCC----CC
Q 017366 122 -RYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKN--AQNAVLSGCSAGGLTSILHCDNFRALFP----VG 194 (373)
Q Consensus 122 -pYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~--a~~v~lsG~SAGGlga~~~~d~v~~~lp----~~ 194 (373)
|-=+|-++..+... +...+ -....+++.+..++.. +++ ...+.|+|.|-||.=+..-+.+|.+.-. ..
T Consensus 125 qPvGtGfSy~~~~~~-~~~~~--~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 125 QPVGSGFSYSKTPIE-RTSDT--SEVKKIHEFLQKWLIK--HPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred CCCCCCccCCCCCCC-ccCCH--HHHHHHHHHHHHHHHh--CccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 44445554432211 11110 0123444444444432 332 3469999999999777766777765321 12
Q ss_pred cEEEEee
Q 017366 195 TKVKCFA 201 (373)
Q Consensus 195 ~~v~~l~ 201 (373)
..++.+.
T Consensus 200 inl~Gi~ 206 (437)
T PLN02209 200 INLQGYV 206 (437)
T ss_pred eeeeeEE
Confidence 4555554
No 37
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=65.93 E-value=8.6 Score=39.63 Aligned_cols=43 Identities=26% Similarity=0.412 Sum_probs=28.5
Q ss_pred HHHHHHHHHHH---hC---CCccCeEEEEeeChhhHHHHHhhHHHHhhC
Q 017366 149 VFQAVMEDLMA---KG---MKNAQNAVLSGCSAGGLTSILHCDNFRALF 191 (373)
Q Consensus 149 n~~avl~~l~~---~~---l~~a~~v~lsG~SAGGlga~~~~d~v~~~l 191 (373)
-.+.+.++|++ +. ..++++.+|+|.|.||++|+.-+=.--++|
T Consensus 265 f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~F 313 (411)
T PRK10439 265 FWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERF 313 (411)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccc
Confidence 34555566654 22 357889999999999999986544333334
No 38
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=65.84 E-value=16 Score=31.47 Aligned_cols=28 Identities=21% Similarity=0.135 Sum_probs=22.0
Q ss_pred ccCeEEEEeeChhhHHHHHhhHHHHhhC
Q 017366 164 NAQNAVLSGCSAGGLTSILHCDNFRALF 191 (373)
Q Consensus 164 ~a~~v~lsG~SAGGlga~~~~d~v~~~l 191 (373)
...+|+|+|+|.||-=|.+-+-+++...
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~ 53 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG 53 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc
Confidence 4578999999999977777677776654
No 39
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=64.79 E-value=6.8 Score=37.31 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=25.2
Q ss_pred HHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHH
Q 017366 154 MEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFR 188 (373)
Q Consensus 154 l~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~ 188 (373)
+++++. -+++++.|+++|+|||+-=+..-.-++|
T Consensus 125 v~filk-~~~n~k~l~~gGHSaGAHLa~qav~R~r 158 (270)
T KOG4627|consen 125 VNFILK-YTENTKVLTFGGHSAGAHLAAQAVMRQR 158 (270)
T ss_pred HHHHHH-hcccceeEEEcccchHHHHHHHHHHHhc
Confidence 466774 6899999999999999866555444433
No 40
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=64.56 E-value=19 Score=32.62 Aligned_cols=53 Identities=17% Similarity=0.183 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecc
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 203 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DS 203 (373)
......++.+.+. .++ ...+|.|.|.||+=|+-=+..+.+. ...+...++.|+
T Consensus 50 ~la~~y~~~I~~~-~~~-gp~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 50 ELASRYAEAIRAR-QPE-GPYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp HHHHHHHHHHHHH-TSS-SSEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred HHHHHHHHHhhhh-CCC-CCeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 3445555555542 122 2899999999999999888888887 333445566775
No 41
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=64.07 E-value=15 Score=33.80 Aligned_cols=37 Identities=30% Similarity=0.482 Sum_probs=23.0
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCC
Q 017366 150 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP 192 (373)
Q Consensus 150 ~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp 192 (373)
..+.++.++++ .. ++.++|.|+|.||+-|.. ++++++
T Consensus 45 a~~~l~~~i~~-~~-~~~~~liGSSlGG~~A~~----La~~~~ 81 (187)
T PF05728_consen 45 AIAQLEQLIEE-LK-PENVVLIGSSLGGFYATY----LAERYG 81 (187)
T ss_pred HHHHHHHHHHh-CC-CCCeEEEEEChHHHHHHH----HHHHhC
Confidence 33445555542 22 233999999999977764 455554
No 42
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=64.00 E-value=15 Score=34.09 Aligned_cols=55 Identities=16% Similarity=0.251 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccccc
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFI 207 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fl 207 (373)
-++.+++||.++..-++++|-|.|.|-||--|++ ++..+|.=..|..++.|++..
T Consensus 5 yfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALl----lAs~~~~i~avVa~~ps~~~~ 59 (213)
T PF08840_consen 5 YFEEAIDWLKSHPEVDPDKIGIIGISKGAELALL----LASRFPQISAVVAISPSSVVF 59 (213)
T ss_dssp HHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHH----HHHHSSSEEEEEEES--SB--
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHH----HHhcCCCccEEEEeCCceeEe
Confidence 3678999999754445789999999999988886 445566423366667776554
No 43
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=62.52 E-value=8.2 Score=41.78 Aligned_cols=39 Identities=18% Similarity=0.304 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
.+-+.+.+++|.+.++-++++|.++|.|.||+-|+.-.-
T Consensus 454 ~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~ 492 (620)
T COG1506 454 LEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAAT 492 (620)
T ss_pred HHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHh
Confidence 345666777777667888889999999999999876443
No 44
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=61.99 E-value=9.2 Score=40.39 Aligned_cols=38 Identities=21% Similarity=0.164 Sum_probs=31.3
Q ss_pred ehHHHHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHH
Q 017366 145 RGARVFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSIL 182 (373)
Q Consensus 145 rG~~n~~avl~~l~~~--~l-~~a~~v~lsG~SAGGlga~~ 182 (373)
-|..-...+|+|..++ .| ++++.|-|.|.|||+..++.
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~ 196 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILT 196 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHH
Confidence 5778888999999863 45 58999999999999987543
No 45
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=60.89 E-value=87 Score=32.99 Aligned_cols=143 Identities=13% Similarity=0.133 Sum_probs=87.8
Q ss_pred CCCCcEEEecCCC-CCCccEEEEeeccccccChhhhhhccCCCCCCccccccccccccccCCCCCCCCCcc--ccceEEE
Q 017366 45 GSPPAYHFDKGFG-AGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV 121 (373)
Q Consensus 45 GSp~~yy~~~g~g-~~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v 121 (373)
|..-.|||-+.-. ...+-+||.|.||=-|-+.. -....+|... +...|- .-..||.=+ ..|++||
T Consensus 56 ~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~----G~~~E~GPf~-----v~~~G~---tL~~N~ySWnk~aNiLfL 123 (454)
T KOG1282|consen 56 GRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG----GLFEENGPFR-----VKYNGK---TLYLNPYSWNKEANILFL 123 (454)
T ss_pred CceEEEEEEEccCCCCCCCEEEEeCCCCCccchh----hhhhhcCCeE-----EcCCCC---cceeCCccccccccEEEE
Confidence 5555677755521 13355999999999998875 1223445322 112222 346677222 3567888
Q ss_pred --ecCCCCccCCCcccccCCCceeEehHHHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHHhhHHHHhhCC----C
Q 017366 122 --RYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALFP----V 193 (373)
Q Consensus 122 --pYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~--~a~~v~lsG~SAGGlga~~~~d~v~~~lp----~ 193 (373)
|==+|-+++.+... +. ..-.....++..++++|+.. ++ +-....++|.|-+|.=+..-++.|.+.=. .
T Consensus 124 d~PvGvGFSYs~~~~~-~~-~~D~~~A~d~~~FL~~wf~k--fPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~ 199 (454)
T KOG1282|consen 124 DQPVGVGFSYSNTSSD-YK-TGDDGTAKDNYEFLQKWFEK--FPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKP 199 (454)
T ss_pred ecCCcCCccccCCCCc-Cc-CCcHHHHHHHHHHHHHHHHh--ChhhcCCCeEEecccccceehHHHHHHHHhccccccCC
Confidence 66666666665432 11 12223348899999999984 44 34679999999999888888888877532 1
Q ss_pred CcEEEEeecc
Q 017366 194 GTKVKCFADA 203 (373)
Q Consensus 194 ~~~v~~l~DS 203 (373)
...+++++=.
T Consensus 200 ~iNLkG~~IG 209 (454)
T KOG1282|consen 200 NINLKGYAIG 209 (454)
T ss_pred cccceEEEec
Confidence 3556666543
No 46
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=60.83 E-value=8.8 Score=36.62 Aligned_cols=32 Identities=25% Similarity=0.373 Sum_probs=23.1
Q ss_pred HHHHHHHhCCCccCeE-EEEeeChhhHHHHHhh
Q 017366 153 VMEDLMAKGMKNAQNA-VLSGCSAGGLTSILHC 184 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v-~lsG~SAGGlga~~~~ 184 (373)
|++.|.++|..--+++ .++|+|||++-+...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 17 AAKALLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHHHHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 5677777666433333 7999999999887774
No 47
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=59.26 E-value=5.8 Score=41.88 Aligned_cols=27 Identities=22% Similarity=0.425 Sum_probs=22.0
Q ss_pred CCCccCeEEEEeeChhhHHHHHhhHHHH
Q 017366 161 GMKNAQNAVLSGCSAGGLTSILHCDNFR 188 (373)
Q Consensus 161 ~l~~a~~v~lsG~SAGGlga~~~~d~v~ 188 (373)
|| +++++||||-|+|.+||+++...+.
T Consensus 353 gF-~~~qLILSGlSMGTfgAlYYga~l~ 379 (511)
T TIGR03712 353 GF-DHDQLILSGLSMGTFGALYYGAKLS 379 (511)
T ss_pred CC-CHHHeeeccccccchhhhhhcccCC
Confidence 44 4677999999999999999876554
No 48
>PLN02442 S-formylglutathione hydrolase
Probab=59.01 E-value=9.6 Score=36.78 Aligned_cols=22 Identities=23% Similarity=0.268 Sum_probs=18.7
Q ss_pred ccCeEEEEeeChhhHHHHHhhH
Q 017366 164 NAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 164 ~a~~v~lsG~SAGGlga~~~~d 185 (373)
+.++++|+|.|+||++|+..+-
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~ 162 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYL 162 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHH
Confidence 5688999999999999987554
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=58.38 E-value=18 Score=34.54 Aligned_cols=36 Identities=11% Similarity=0.138 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
.-+.+++++|.+ ..+..++|+|.|.|.||+-++..+
T Consensus 83 ~d~~~~~~~l~~-~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 83 ADIAAAIDAFRE-AAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHHHHh-hCCCCCcEEEEEECHHHHHHHHHh
Confidence 457888888875 344457799999999999888764
No 50
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=58.28 E-value=12 Score=35.90 Aligned_cols=31 Identities=29% Similarity=0.176 Sum_probs=20.6
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
|++.|.+++...... .++|.|||++-+...+
T Consensus 18 Vl~aL~e~g~~~~~d-~i~GtSAGAl~aa~~a 48 (245)
T cd07218 18 VAVCLKKYAPHLLLN-KISGASAGALAACCLL 48 (245)
T ss_pred HHHHHHHhCcccCCC-eEEEEcHHHHHHHHHH
Confidence 456677666322222 3999999999887654
No 51
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=57.49 E-value=12 Score=35.70 Aligned_cols=32 Identities=25% Similarity=0.315 Sum_probs=22.5
Q ss_pred HHHHHHHhCCCccCe-EEEEeeChhhHHHHHhh
Q 017366 153 VMEDLMAKGMKNAQN-AVLSGCSAGGLTSILHC 184 (373)
Q Consensus 153 vl~~l~~~~l~~a~~-v~lsG~SAGGlga~~~~ 184 (373)
|++.|.++|+.-..+ -.++|+|||++-+...+
T Consensus 17 Vl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a 49 (243)
T cd07204 17 VASALREHAPRLLQNARRIAGASAGAIVAAVVL 49 (243)
T ss_pred HHHHHHHcCcccccCCCEEEEEcHHHHHHHHHH
Confidence 567777766543232 48999999999877644
No 52
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=56.94 E-value=32 Score=33.26 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~ 183 (373)
+.+.++++.|....-.....++|.|.|.||.-++..
T Consensus 116 ~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~ 151 (330)
T PLN02298 116 EDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLI 151 (330)
T ss_pred HHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHH
Confidence 457778888775211123469999999999877654
No 53
>PLN03037 lipase class 3 family protein; Provisional
Probab=56.01 E-value=35 Score=36.46 Aligned_cols=55 Identities=13% Similarity=0.194 Sum_probs=38.3
Q ss_pred ccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 017366 164 NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (373)
Q Consensus 164 ~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (373)
+...|+|+|+|-||-=|.+++-+++..+|....|.++.=++ +.-|+..+.++++.
T Consensus 316 e~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGs------PRVGN~aFA~~~~~ 370 (525)
T PLN03037 316 EEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGA------PRVGNLAFKEKLNE 370 (525)
T ss_pred CcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecC------CCccCHHHHHHHHh
Confidence 45679999999999999999999988877432455555433 23456555555554
No 54
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=55.25 E-value=1.2e+02 Score=30.14 Aligned_cols=128 Identities=15% Similarity=0.148 Sum_probs=66.1
Q ss_pred CCccEEEEeeccccccChhhhhhccCCCCCCccccccccccccccCCCCCCCCCcc--ccceEEE--ecCCCCccCCCcc
Q 017366 59 GINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKV--RYCDGASFTGDVE 134 (373)
Q Consensus 59 ~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~v--pYCdGd~~~G~~~ 134 (373)
..+-++|.|+||=-|-+..--. ...|.-. +...+- ..-..||+=+ ..|+||| |=-+|-|+.-+..
T Consensus 38 ~~~Pl~~wlnGGPG~SS~~g~f----~e~GP~~-----~~~~~~--~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~ 106 (415)
T PF00450_consen 38 EDDPLILWLNGGPGCSSMWGLF----GENGPFR-----INPDGP--YTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPS 106 (415)
T ss_dssp CSS-EEEEEE-TTTB-THHHHH----CTTSSEE-----EETTST--SEEEE-TT-GGGTSEEEEE--STTSTT-EESSGG
T ss_pred CCccEEEEecCCceeccccccc----cccCceE-----Eeeccc--ccccccccccccccceEEEeecCceEEeeccccc
Confidence 4568999999997687764222 2233211 110010 1124555221 4688999 5556666554433
Q ss_pred cccCCCceeEehHHHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHHhhHHHHhhCCC----CcEEEEee
Q 017366 135 AVNPANNLHFRGARVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRALFPV----GTKVKCFA 201 (373)
Q Consensus 135 ~~~~~~~l~frG~~n~~avl~~l~~~~l~--~a~~v~lsG~SAGGlga~~~~d~v~~~lp~----~~~v~~l~ 201 (373)
. +. ...---...++ ..|..++.+ ++ +...+.|+|.|-||.=+..-+.+|.+.-.+ ..+++.|.
T Consensus 107 ~-~~-~~~~~~a~~~~-~fl~~f~~~-~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~ 175 (415)
T PF00450_consen 107 D-YV-WNDDQAAEDLY-EFLQQFFQK-FPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIA 175 (415)
T ss_dssp G-GS--SHHHHHHHHH-HHHHHHHHH-SGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEE
T ss_pred c-cc-chhhHHHHHHH-HHHHHhhhh-hhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccce
Confidence 1 10 01111122233 333333332 44 334799999999999988888888877643 46777665
No 55
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=54.58 E-value=28 Score=33.75 Aligned_cols=61 Identities=18% Similarity=0.195 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHH
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYA 223 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~ 223 (373)
-+.+++++|.+. ..++|+|.|.|.||.=++..+ ...|..++ ++.+..+-++|...++.|+.
T Consensus 85 Dv~~ai~~L~~~---~~~~v~LvG~SmGG~vAl~~A----~~~p~~v~-------~lVL~~P~~~g~~~l~~~lr 145 (266)
T TIGR03101 85 DVAAAYRWLIEQ---GHPPVTLWGLRLGALLALDAA----NPLAAKCN-------RLVLWQPVVSGKQQLQQFLR 145 (266)
T ss_pred HHHHHHHHHHhc---CCCCEEEEEECHHHHHHHHHH----HhCccccc-------eEEEeccccchHHHHHHHHH
Confidence 355667777653 256899999999998877543 23343221 12222344566666666543
No 56
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=54.28 E-value=45 Score=28.59 Aligned_cols=37 Identities=19% Similarity=0.278 Sum_probs=25.0
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 017366 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (373)
++++|.|+|.||.-++..+.. .|..++-.++.+++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAAR----YPDRVKGLVLLSPPPP 102 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHH----SGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccccc----cccccccceeeccccc
Confidence 679999999999887766543 4544444455565543
No 57
>PRK11460 putative hydrolase; Provisional
Probab=53.69 E-value=20 Score=33.48 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 017366 150 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (373)
Q Consensus 150 ~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~ 183 (373)
+.++++++..+.--+.++|+|.|.|.||.-++..
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~ 120 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEA 120 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHH
Confidence 3345555554322356789999999999988753
No 58
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=51.67 E-value=18 Score=35.21 Aligned_cols=40 Identities=20% Similarity=0.224 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhCC---------CccCeEEEEeeChhhHHHHHhhHHHH
Q 017366 148 RVFQAVMEDLMAKGM---------KNAQNAVLSGCSAGGLTSILHCDNFR 188 (373)
Q Consensus 148 ~n~~avl~~l~~~~l---------~~a~~v~lsG~SAGGlga~~~~d~v~ 188 (373)
+.+.++++||.+ ++ .+.++|-|+|+|+||-.++..+-..+
T Consensus 65 ~~~~~vi~Wl~~-~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~ 113 (259)
T PF12740_consen 65 ASAAEVIDWLAK-GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNA 113 (259)
T ss_pred HHHHHHHHHHHh-cchhhccccccccccceEEeeeCCCCHHHHHHHhhhc
Confidence 357888999885 33 24578999999999998876655543
No 59
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=50.64 E-value=21 Score=32.48 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
...+++.+++|.+..-...++|.+.|.|.||.-++..+
T Consensus 79 ~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a 116 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLA 116 (218)
T ss_dssp HHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhh
Confidence 34556778888864334789999999999998887643
No 60
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=50.54 E-value=24 Score=37.10 Aligned_cols=35 Identities=20% Similarity=0.167 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHh--CC-CccCeEEEEeeChhhHHHHHh
Q 017366 149 VFQAVMEDLMAK--GM-KNAQNAVLSGCSAGGLTSILH 183 (373)
Q Consensus 149 n~~avl~~l~~~--~l-~~a~~v~lsG~SAGGlga~~~ 183 (373)
-..+.|+|+..+ .+ +++++|.|.|.||||..+-++
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l 212 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLL 212 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHH
Confidence 466778888762 44 699999999999999887554
No 61
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=49.11 E-value=51 Score=31.18 Aligned_cols=55 Identities=13% Similarity=0.091 Sum_probs=39.2
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCC---CCcEEEEeecc
Q 017366 145 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP---VGTKVKCFADA 203 (373)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp---~~~~v~~l~DS 203 (373)
.|..++.+.|+... ...+.|+|.|.|.|+.-+-....++.+.-. ...++..+.|-
T Consensus 31 ~G~~~L~~ai~~~~----~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 31 EGVANLDAAIRAAI----AAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHHHhhc----cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 46777777776533 366789999999999999998888887432 23455555553
No 62
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=48.89 E-value=48 Score=31.55 Aligned_cols=24 Identities=29% Similarity=0.493 Sum_probs=18.8
Q ss_pred CCccCeEEEEeeChhhHHHHHhhH
Q 017366 162 MKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 162 l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
+...++|+|.|+|.||+-+...+.
T Consensus 83 l~~~~~v~lvGhS~GG~v~~~~a~ 106 (273)
T PLN02211 83 LPENEKVILVGHSAGGLSVTQAIH 106 (273)
T ss_pred cCCCCCEEEEEECchHHHHHHHHH
Confidence 434578999999999997776654
No 63
>PLN00021 chlorophyllase
Probab=48.87 E-value=22 Score=35.21 Aligned_cols=39 Identities=23% Similarity=0.186 Sum_probs=27.1
Q ss_pred HHHHHHHHHHh---CC-----CccCeEEEEeeChhhHHHHHhhHHHH
Q 017366 150 FQAVMEDLMAK---GM-----KNAQNAVLSGCSAGGLTSILHCDNFR 188 (373)
Q Consensus 150 ~~avl~~l~~~---~l-----~~a~~v~lsG~SAGGlga~~~~d~v~ 188 (373)
..++++||.+. -+ .+.+++.|.|+|+||..++.-+-...
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhcc
Confidence 45666666641 11 34588999999999999887765443
No 64
>PLN02324 triacylglycerol lipase
Probab=48.58 E-value=60 Score=33.81 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCcc-CeEEEEeeChhhHHHHHhhHHHHh
Q 017366 153 VMEDLMAKGMKNA-QNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 153 vl~~l~~~~l~~a-~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
-|..|++ .+++. .+|++||+|-||-=|.+.+-+|..
T Consensus 202 eV~~L~~-~Yp~e~~sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 202 ELKRLLE-LYKNEEISITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred HHHHHHH-HCCCCCceEEEecCcHHHHHHHHHHHHHHH
Confidence 3344554 34544 479999999999888888877765
No 65
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=48.55 E-value=47 Score=34.06 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=48.1
Q ss_pred eeEehHHHHHHHHHHHHHhCCC-ccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEe-eccccccccCCCCchhHHH
Q 017366 142 LHFRGARVFQAVMEDLMAKGMK-NAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCF-ADAGYFINAKDVSGASHIE 219 (373)
Q Consensus 142 l~frG~~n~~avl~~l~~~~l~-~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l-~DSG~fld~~~~~g~~~~~ 219 (373)
.-+.-..-++||++..++ .++ ..+.|||-|.|-||+-+. +.+..+|. |+++ -|+-| =|.-.. .-..|.
T Consensus 287 ~p~n~~nA~DaVvQfAI~-~Lgf~~edIilygWSIGGF~~~----waAs~YPd---VkavvLDAtF-DDllpL-Al~rMP 356 (517)
T KOG1553|consen 287 YPVNTLNAADAVVQFAIQ-VLGFRQEDIILYGWSIGGFPVA----WAASNYPD---VKAVVLDATF-DDLLPL-ALFRMP 356 (517)
T ss_pred CcccchHHHHHHHHHHHH-HcCCCccceEEEEeecCCchHH----HHhhcCCC---ceEEEeecch-hhhhhH-Hhhhch
Confidence 334445678888888886 343 467799999999998765 55677885 3433 47654 222111 223456
Q ss_pred HHHHHHHH
Q 017366 220 QFYAQVVA 227 (373)
Q Consensus 220 ~~~~~v~~ 227 (373)
.+|.++|+
T Consensus 357 ~~~~giV~ 364 (517)
T KOG1553|consen 357 TFFSGIVE 364 (517)
T ss_pred HHHHHHHH
Confidence 78887774
No 66
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=48.12 E-value=16 Score=39.79 Aligned_cols=35 Identities=31% Similarity=0.427 Sum_probs=30.7
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHH
Q 017366 145 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLT 179 (373)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlg 179 (373)
++..-+.+..+.|.++|+-.++++-+.|.||||+=
T Consensus 528 N~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlL 562 (712)
T KOG2237|consen 528 NSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLL 562 (712)
T ss_pred ccHHHHHHHHHHHHHcCCCCccceeEecccCccch
Confidence 34566888999999999999999999999999974
No 67
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=46.87 E-value=82 Score=31.54 Aligned_cols=69 Identities=14% Similarity=0.171 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhh-CCCCcEEEEeeccccccccCCCCchhHHHHHHHHH
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRAL-FPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQV 225 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~-lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~v 225 (373)
-+++.++.|++ .++ --+|++||+|.||-=|.+-+.++... +....+|+++.=++ +..|+..+.+.++..
T Consensus 156 ~~~~~~~~L~~-~~~-~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~------PRvGn~~fa~~~d~~ 225 (336)
T KOG4569|consen 156 GLDAELRRLIE-LYP-NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQ------PRVGNLAFAEWHDEL 225 (336)
T ss_pred HHHHHHHHHHH-hcC-CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecC------CCcccHHHHHHHHhh
Confidence 45667777775 345 55799999999987776666666654 33234566665543 344665555555544
No 68
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=46.79 E-value=42 Score=29.26 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=18.3
Q ss_pred ccCeEEEEeeChhhHHHHHhhHH
Q 017366 164 NAQNAVLSGCSAGGLTSILHCDN 186 (373)
Q Consensus 164 ~a~~v~lsG~SAGGlga~~~~d~ 186 (373)
..++++|.|.|+||.-++..+..
T Consensus 68 ~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 68 GIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred CCCeEEEEEeccHHHHHHHHHHh
Confidence 34679999999999888776554
No 69
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.71 E-value=30 Score=32.77 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHH
Q 017366 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 187 (373)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v 187 (373)
...+.+++++|.+....++++|.++|.|.||.=|++.+...
T Consensus 93 ~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~ 133 (236)
T COG0412 93 LADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRA 133 (236)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhccc
Confidence 45678899999975557889999999999998888766544
No 70
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=46.26 E-value=31 Score=35.42 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~ 183 (373)
..++++++|.....-+.++|.|.|.|.||+-++.-
T Consensus 248 ~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~ 282 (414)
T PRK05077 248 LHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRL 282 (414)
T ss_pred HHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHH
Confidence 34789999886433367899999999999887653
No 71
>PLN02965 Probable pheophorbidase
Probab=46.19 E-value=50 Score=30.55 Aligned_cols=39 Identities=18% Similarity=0.213 Sum_probs=24.4
Q ss_pred CCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccc
Q 017366 162 MKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 204 (373)
Q Consensus 162 l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG 204 (373)
++..++++|.|+|.||.=+...+. ..|..++-.++.++.
T Consensus 68 l~~~~~~~lvGhSmGG~ia~~~a~----~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 68 LPPDHKVILVGHSIGGGSVTEALC----KFTDKISMAIYVAAA 106 (255)
T ss_pred cCCCCCEEEEecCcchHHHHHHHH----hCchheeEEEEEccc
Confidence 433368999999999985554432 446555444455553
No 72
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=45.73 E-value=53 Score=31.72 Aligned_cols=61 Identities=26% Similarity=0.293 Sum_probs=36.5
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHH--HhhCCCCcEEEEeecccccccc
Q 017366 145 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF--RALFPVGTKVKCFADAGYFINA 209 (373)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v--~~~lp~~~~v~~l~DSG~fld~ 209 (373)
+-.+=+++||..|.++ -.-+++=+.|+|.||++++...-.- ...+|+ + -+++.=+|.|-..
T Consensus 84 ~qa~wl~~vl~~L~~~--Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~-l-~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKK--YHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPK-L-NKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHHHHHHHHHHHC--C--SEEEEEEETHHHHHHHHHHHHCTTGTTS-E-E-EEEEEES--TTTT
T ss_pred HHHHHHHHHHHHHHHh--cCCCEEeEEEECccHHHHHHHHHHhccCCCCcc-c-ceEEEeccccCcc
Confidence 3455688899999873 3467889999999999987544332 223664 2 2444445555433
No 73
>PRK10673 acyl-CoA esterase; Provisional
Probab=45.59 E-value=41 Score=30.57 Aligned_cols=35 Identities=20% Similarity=0.164 Sum_probs=22.8
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccc
Q 017366 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 204 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG 204 (373)
++++|.|+|.||.-++..+.. .|..++-.++.|++
T Consensus 81 ~~~~lvGhS~Gg~va~~~a~~----~~~~v~~lvli~~~ 115 (255)
T PRK10673 81 EKATFIGHSMGGKAVMALTAL----APDRIDKLVAIDIA 115 (255)
T ss_pred CceEEEEECHHHHHHHHHHHh----CHhhcceEEEEecC
Confidence 569999999999887765533 44334334444544
No 74
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=44.79 E-value=26 Score=34.35 Aligned_cols=45 Identities=20% Similarity=0.217 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh--hCCC
Q 017366 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA--LFPV 193 (373)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~--~lp~ 193 (373)
..=++.+|.+|.++ =+-+++=+.|+|+||+|...+.-.... .||+
T Consensus 119 s~wlk~~msyL~~~--Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~ 165 (288)
T COG4814 119 SKWLKKAMSYLQKH--YNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPP 165 (288)
T ss_pred HHHHHHHHHHHHHh--cCCceeeeeeeccccHHHHHHHHHhcCCCCCcc
Confidence 44578999999973 233445678999999998877666653 5775
No 75
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=44.77 E-value=56 Score=34.27 Aligned_cols=56 Identities=14% Similarity=0.084 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHh-CCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCC-cEEEEeecccccccc
Q 017366 149 VFQAVMEDLMAK-GMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVG-TKVKCFADAGYFINA 209 (373)
Q Consensus 149 n~~avl~~l~~~-~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~-~~v~~l~DSG~fld~ 209 (373)
.+.++|++|.+. ++ ..++|.|.|+|.||.-|..-+. ++|.. .++.+|.=+|.++..
T Consensus 102 ~la~lI~~L~~~~gl-~l~~VhLIGHSLGAhIAg~ag~----~~p~rV~rItgLDPAgP~F~~ 159 (442)
T TIGR03230 102 DVAKFVNWMQEEFNY-PWDNVHLLGYSLGAHVAGIAGS----LTKHKVNRITGLDPAGPTFEY 159 (442)
T ss_pred HHHHHHHHHHHhhCC-CCCcEEEEEECHHHHHHHHHHH----hCCcceeEEEEEcCCCCcccc
Confidence 455667777642 43 5688999999999987776543 34432 235555556665443
No 76
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=44.70 E-value=27 Score=31.26 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=21.8
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 151 ~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
-.|++.|.++++.- =+++|.|||++=+.+.+
T Consensus 15 ~Gvl~~L~e~~~~~---d~i~GtSaGai~aa~~a 45 (194)
T cd07207 15 IGALKALEEAGILK---KRVAGTSAGAITAALLA 45 (194)
T ss_pred HHHHHHHHHcCCCc---ceEEEECHHHHHHHHHH
Confidence 35667777665543 58999999998765544
No 77
>PRK10349 carboxylesterase BioH; Provisional
Probab=43.88 E-value=55 Score=30.06 Aligned_cols=48 Identities=17% Similarity=0.206 Sum_probs=29.2
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccc
Q 017366 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGY 205 (373)
Q Consensus 151 ~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~ 205 (373)
....+++.+.+ .+++.|.|.|.||.-++..+- ..|..++-.++.|+..
T Consensus 62 ~~~~~~l~~~~---~~~~~lvGhS~Gg~ia~~~a~----~~p~~v~~lili~~~~ 109 (256)
T PRK10349 62 ADMAEAVLQQA---PDKAIWLGWSLGGLVASQIAL----THPERVQALVTVASSP 109 (256)
T ss_pred HHHHHHHHhcC---CCCeEEEEECHHHHHHHHHHH----hChHhhheEEEecCcc
Confidence 34445555422 367899999999998876543 3444444444556543
No 78
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=43.07 E-value=61 Score=29.58 Aligned_cols=35 Identities=20% Similarity=0.078 Sum_probs=22.7
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecc
Q 017366 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 203 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DS 203 (373)
.++++|.|.|.||.-++..+. ..|..++-.++.++
T Consensus 94 ~~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~v~~~~ 128 (278)
T TIGR03056 94 LSPDGVIGHSAGAAIALRLAL----DGPVTPRMVVGINA 128 (278)
T ss_pred CCCceEEEECccHHHHHHHHH----hCCcccceEEEEcC
Confidence 367899999999988876543 44543443344444
No 79
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=42.40 E-value=33 Score=36.38 Aligned_cols=37 Identities=16% Similarity=0.062 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
..-+.++|+||..+...+ .+|.+.|.|.||.-+++.+
T Consensus 79 ~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a 115 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAA 115 (550)
T ss_pred chHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHh
Confidence 345788999998754444 6899999999998766543
No 80
>PLN02310 triacylglycerol lipase
Probab=41.96 E-value=79 Score=32.81 Aligned_cols=53 Identities=15% Similarity=0.162 Sum_probs=35.9
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 017366 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (373)
..+|+++|+|-||-=|.+.+..++..++. ..|.++.=++. .-|+..+.++++.
T Consensus 208 ~~sI~vTGHSLGGALAtLaA~dl~~~~~~-~~v~vyTFGsP------RVGN~~Fa~~~~~ 260 (405)
T PLN02310 208 EVSLTVTGHSLGGALALLNAYEAATTIPD-LFVSVISFGAP------RVGNIAFKEKLNE 260 (405)
T ss_pred cceEEEEcccHHHHHHHHHHHHHHHhCcC-cceeEEEecCC------CcccHHHHHHHHh
Confidence 35799999999999888999888876663 44555554443 2355554555543
No 81
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.60 E-value=29 Score=33.36 Aligned_cols=31 Identities=29% Similarity=0.258 Sum_probs=20.1
Q ss_pred HHHHHHHhCCC-ccCeEEEEeeChhhHHHHHh
Q 017366 153 VMEDLMAKGMK-NAQNAVLSGCSAGGLTSILH 183 (373)
Q Consensus 153 vl~~l~~~~l~-~a~~v~lsG~SAGGlga~~~ 183 (373)
|++.|.+++.. -.+--.++|.|||++.+...
T Consensus 22 Vl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~ 53 (249)
T cd07220 22 VASCLLEHAPFLVANARKIYGASAGALTATAL 53 (249)
T ss_pred HHHHHHhcCCcccccCCeEEEEcHHHHHHHHH
Confidence 55667665532 11124688999999988753
No 82
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=39.41 E-value=58 Score=28.48 Aligned_cols=50 Identities=18% Similarity=0.226 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 017366 150 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (373)
Q Consensus 150 ~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (373)
++.+.+++... +. ++++|.|.|.||.-++..+. ..|..++-.++.+++..
T Consensus 52 ~~~~~~~~~~~-~~--~~~~lvG~S~Gg~~a~~~a~----~~p~~v~~~il~~~~~~ 101 (245)
T TIGR01738 52 LADAAEAIAAQ-AP--DPAIWLGWSLGGLVALHIAA----THPDRVRALVTVASSPC 101 (245)
T ss_pred HHHHHHHHHHh-CC--CCeEEEEEcHHHHHHHHHHH----HCHHhhheeeEecCCcc
Confidence 45556666542 22 67999999999987765443 33433333344455443
No 83
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=39.24 E-value=44 Score=29.75 Aligned_cols=21 Identities=19% Similarity=0.254 Sum_probs=16.9
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 017366 165 AQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d 185 (373)
.++++|.|.|.||.-++..+.
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred CCcEEEEEechhHHHHHHHHH
Confidence 467999999999987776554
No 84
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=39.22 E-value=35 Score=35.45 Aligned_cols=30 Identities=27% Similarity=0.622 Sum_probs=22.0
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
|++.|.++|+.- + +++|+|||++-+.+.+-
T Consensus 91 VLkaL~E~gl~p-~--vIsGTSaGAivAal~as 120 (421)
T cd07230 91 VLKALFEANLLP-R--IISGSSAGSIVAAILCT 120 (421)
T ss_pred HHHHHHHcCCCC-C--EEEEECHHHHHHHHHHc
Confidence 567777777742 2 79999999988766553
No 85
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=39.16 E-value=79 Score=32.18 Aligned_cols=22 Identities=27% Similarity=0.262 Sum_probs=17.2
Q ss_pred cCeEEEEeeChhhHHHHHhhHH
Q 017366 165 AQNAVLSGCSAGGLTSILHCDN 186 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~ 186 (373)
.++++|.|+|.||+-++..+-.
T Consensus 175 ~~~~~lvGhS~GG~la~~~a~~ 196 (402)
T PLN02894 175 LSNFILLGHSFGGYVAAKYALK 196 (402)
T ss_pred CCCeEEEEECHHHHHHHHHHHh
Confidence 3479999999999988765543
No 86
>PLN02571 triacylglycerol lipase
Probab=38.69 E-value=62 Score=33.67 Aligned_cols=40 Identities=18% Similarity=0.277 Sum_probs=26.6
Q ss_pred HHHHHHHHH--hCCCccC-eEEEEeeChhhHHHHHhhHHHHhh
Q 017366 151 QAVMEDLMA--KGMKNAQ-NAVLSGCSAGGLTSILHCDNFRAL 190 (373)
Q Consensus 151 ~avl~~l~~--~~l~~a~-~v~lsG~SAGGlga~~~~d~v~~~ 190 (373)
+.+++++.. +.+++.+ .|+++|+|-||-=|.+.+-.++..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl~~~ 250 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDIVAN 250 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHHHHh
Confidence 344444432 1344433 699999999998888888887653
No 87
>PLN00413 triacylglycerol lipase
Probab=38.05 E-value=50 Score=34.99 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=25.0
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 017366 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 152 avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
..+++++. ..+++ +|+++|+|.||-=|.+.+.+++.
T Consensus 272 ~~Lk~ll~-~~p~~-kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 272 RHLKEIFD-QNPTS-KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHH-HCCCC-eEEEEecCHHHHHHHHHHHHHHh
Confidence 34444443 24444 59999999999888888877664
No 88
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=37.63 E-value=54 Score=30.71 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=22.7
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccc
Q 017366 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAG 204 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG 204 (373)
.++++|.|.|.||.=++..+-. .|..++-.++.++.
T Consensus 90 ~~~~~LvG~S~GG~va~~~a~~----~p~~v~~lvl~~~~ 125 (276)
T TIGR02240 90 YGQVNAIGVSWGGALAQQFAHD----YPERCKKLILAATA 125 (276)
T ss_pred cCceEEEEECHHHHHHHHHHHH----CHHHhhheEEeccC
Confidence 3569999999999877755433 34333334444544
No 89
>PRK15231 fimbrial adhesin protein SefD; Provisional
Probab=37.62 E-value=50 Score=29.43 Aligned_cols=62 Identities=15% Similarity=0.164 Sum_probs=39.0
Q ss_pred CCCCcEEEecCCCCCCccEEEEeeccccccChhhhhhccCCCCCCccccccccccccccCCCCCCCCCcc
Q 017366 45 GSPPAYHFDKGFGAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY 114 (373)
Q Consensus 45 GSp~~yy~~~g~g~~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~~~~~~~~~Gils~~~~~NP~f~ 114 (373)
|-.|+.|+-.|.....+++-|=++|.||--|. ..+ |-++.-.+...|.=+.+.++...||-|
T Consensus 78 gg~P~~YIvqGk~dsqh~LrVRlgGeGWqPd~---~g~-----Giv~~~~eqa~FDVv~DGnQ~V~pD~Y 139 (150)
T PRK15231 78 KNTPGAYIIRGQNNSAHKLRIRIGGEDWQPDN---SGI-----GMVSHSDFTNEFNIYYFGNGDIPVDTY 139 (150)
T ss_pred CCCccEEEEECCCCCcceEEEEecCCCccCCC---CCC-----ceEeecccceeEEEEEeCCeecCCCeE
Confidence 44556666666556688999999999998776 222 211111244455556667777777544
No 90
>KOG3101 consensus Esterase D [General function prediction only]
Probab=37.48 E-value=14 Score=35.44 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHH----hCCC-ccCeEEEEeeChhhHHHHH
Q 017366 148 RVFQAVMEDLMA----KGMK-NAQNAVLSGCSAGGLTSIL 182 (373)
Q Consensus 148 ~n~~avl~~l~~----~~l~-~a~~v~lsG~SAGGlga~~ 182 (373)
+...-|.++|.+ ..++ ++.++-++|+|+||.||+.
T Consensus 118 rMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~ 157 (283)
T KOG3101|consen 118 RMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALT 157 (283)
T ss_pred hHHHHHHHHHHHHhccccccccchhcceeccccCCCceEE
Confidence 344445555543 2332 4566889999999999875
No 91
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=36.97 E-value=26 Score=29.94 Aligned_cols=18 Identities=44% Similarity=0.543 Sum_probs=14.1
Q ss_pred EEEEeeChhhHHHHHhhH
Q 017366 168 AVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 168 v~lsG~SAGGlga~~~~d 185 (373)
-+++|.||||+-+.+.+-
T Consensus 29 d~i~GtS~Gal~a~~~~~ 46 (204)
T PF01734_consen 29 DVISGTSAGALNAALLAL 46 (204)
T ss_dssp SEEEEECCHHHHHHHHHT
T ss_pred cEEEEcChhhhhHHHHHh
Confidence 379999999998855443
No 92
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=36.81 E-value=47 Score=29.31 Aligned_cols=31 Identities=29% Similarity=0.477 Sum_probs=22.6
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 151 ~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
--+++.|.++++. . =+++|.|||++-+.+.+
T Consensus 16 ~Gvl~~L~~~~~~-~--d~i~GtSaGal~a~~~a 46 (175)
T cd07205 16 IGVLKALEEAGIP-I--DIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHHHHHcCCC-e--eEEEEECHHHHHHHHHH
Confidence 4567777766653 3 38999999999876655
No 93
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=36.36 E-value=62 Score=33.85 Aligned_cols=34 Identities=15% Similarity=0.182 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
.+++.++.+.+. ...++|+|.|+|+||+=+....
T Consensus 147 ~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 147 GLKKKLETVYKA--SGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHHHH
Confidence 344444444432 2357899999999998877544
No 94
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=36.23 E-value=43 Score=31.35 Aligned_cols=30 Identities=30% Similarity=0.531 Sum_probs=21.5
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 152 avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
-|++.|.++|++ . -.++|.|||++-+.+.+
T Consensus 17 GvL~aL~e~gi~-~--~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 17 GFLAALLEMGLE-P--SAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHHHHHcCCC-c--eEEEEeCHHHHHHHHHH
Confidence 356677666653 2 37999999999877655
No 95
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=36.07 E-value=50 Score=29.35 Aligned_cols=28 Identities=29% Similarity=0.528 Sum_probs=19.5
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~ 183 (373)
+++.|.++++. -=+++|.|||++-+.+.
T Consensus 18 vl~~L~e~g~~---~d~i~GtSaGAi~aa~~ 45 (175)
T cd07228 18 VLRALEEEGIE---IDIIAGSSIGALVGALY 45 (175)
T ss_pred HHHHHHHCCCC---eeEEEEeCHHHHHHHHH
Confidence 56666666653 34899999999965443
No 96
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=36.02 E-value=41 Score=34.92 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHH
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSIL 182 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~ 182 (373)
+-+++||++|.+...=+.++|.+.|-|.||+-|+-
T Consensus 243 ~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvR 277 (411)
T PF06500_consen 243 RLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVR 277 (411)
T ss_dssp HHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccChhheEEEEeccchHHHHH
Confidence 45789999998643337789999999999977653
No 97
>TIGR03739 PRTRC_D PRTRC system protein D. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated PRTRC system protein D. The gray zone, between trusted and noise, includes proteins found in the same genomes as other proteins of the PRTRC systems, but not in the same contiguous gene region.
Probab=35.92 E-value=63 Score=31.81 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=24.6
Q ss_pred CccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeec
Q 017366 163 KNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFAD 202 (373)
Q Consensus 163 ~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~D 202 (373)
.+.+.|+|+|. |+.+..+++++.||. +++.++.|
T Consensus 272 ~~~~~Iil~GG-----Ga~ll~~~l~~~f~~-~~i~~~~d 305 (320)
T TIGR03739 272 ESIQNIVLVGG-----GAFLFKKAVKAAFPK-HRIVEVDE 305 (320)
T ss_pred CcccEEEEeCC-----cHHHHHHHHHHHCCC-CeeEecCC
Confidence 35788999875 344668999999996 56655555
No 98
>PLN02719 triacylglycerol lipase
Probab=34.43 E-value=74 Score=34.04 Aligned_cols=54 Identities=17% Similarity=0.265 Sum_probs=34.9
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhh-CCC-----CcEEEEeeccccccccCCCCchhHHHHHHHH
Q 017366 165 AQNAVLSGCSAGGLTSILHCDNFRAL-FPV-----GTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~v~~~-lp~-----~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (373)
..+|+++|+|-||-=|.+.+.+++.. +++ ...|.++.=++ +--|+..+.++++.
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGs------PRVGN~~Fa~~~~~ 356 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGG------PRVGNIRFKERIEE 356 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecC------CCccCHHHHHHHHh
Confidence 35899999999999999999888775 331 12355544333 23355555555543
No 99
>PRK00870 haloalkane dehalogenase; Provisional
Probab=34.30 E-value=1.2e+02 Score=28.75 Aligned_cols=36 Identities=19% Similarity=0.184 Sum_probs=23.8
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccc
Q 017366 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGY 205 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~ 205 (373)
++|+|.|+|.||.=++..+. ..|..++-.++.+++.
T Consensus 115 ~~v~lvGhS~Gg~ia~~~a~----~~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 115 TDVTLVCQDWGGLIGLRLAA----EHPDRFARLVVANTGL 150 (302)
T ss_pred CCEEEEEEChHHHHHHHHHH----hChhheeEEEEeCCCC
Confidence 56999999999987664443 3454444445566664
No 100
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=33.74 E-value=44 Score=32.65 Aligned_cols=30 Identities=30% Similarity=0.461 Sum_probs=21.6
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
|++.|.+.| -+--+|+|+|||++-+.+.+.
T Consensus 29 Vl~aL~e~g---i~~~~iaGtS~GAiva~l~A~ 58 (306)
T COG1752 29 VLKALEEAG---IPIDVIAGTSAGAIVAALYAA 58 (306)
T ss_pred HHHHHHHcC---CCccEEEecCHHHHHHHHHHc
Confidence 567777655 344689999999987666554
No 101
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=33.37 E-value=1.2e+02 Score=28.62 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=22.5
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecc
Q 017366 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 203 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DS 203 (373)
++++|.|.|.||.-++..+- ..|+.++-.++.++
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~----~~p~~v~~lili~~ 135 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAV----DAPELVRGVMLINI 135 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHH----hChhheeEEEEECC
Confidence 77999999999987766543 34543443444454
No 102
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.09 E-value=27 Score=32.45 Aligned_cols=15 Identities=33% Similarity=0.784 Sum_probs=11.7
Q ss_pred eEEEEeeChhhHHHH
Q 017366 167 NAVLSGCSAGGLTSI 181 (373)
Q Consensus 167 ~v~lsG~SAGGlga~ 181 (373)
..+++|||.||+=|.
T Consensus 102 s~~~sgcsmGayhA~ 116 (227)
T COG4947 102 STIVSGCSMGAYHAA 116 (227)
T ss_pred Cccccccchhhhhhh
Confidence 379999999996443
No 103
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=32.88 E-value=62 Score=34.61 Aligned_cols=124 Identities=19% Similarity=0.239 Sum_probs=73.9
Q ss_pred EEEecCCCCccCCCccc-ccCC---------------------CceeE---------ehHHHHHHHHHHHHHh--CC-Cc
Q 017366 119 IKVRYCDGASFTGDVEA-VNPA---------------------NNLHF---------RGARVFQAVMEDLMAK--GM-KN 164 (373)
Q Consensus 119 V~vpYCdGd~~~G~~~~-~~~~---------------------~~l~f---------rG~~n~~avl~~l~~~--~l-~~ 164 (373)
|.|.-=-|..++|..+- +|.| .=||+ +|..-=+-+|.|+.++ -| ++
T Consensus 137 VlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGGn 216 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGGN 216 (601)
T ss_pred EEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCCC
Confidence 77777788888887652 2322 12444 4555566778888863 23 69
Q ss_pred cCeEEEEeeChhhHHHHHhh--HHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHHhcCCCCCCCh---hh
Q 017366 165 AQNAVLSGCSAGGLTSILHC--DNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGSAKHLPA---SC 239 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~--d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~v~~~~~~~~~lp~---~C 239 (373)
+++|-|.|.|||+-.+.+|. .--|.++ -++|.-||-+-+.-.+......++.-..+.++.|+.+.-+. +|
T Consensus 217 p~~vTLFGESAGaASv~aHLlsP~S~glF-----~raIlQSGS~~~pWA~~s~~~A~~~s~~La~lvgC~~~~~~~i~~C 291 (601)
T KOG4389|consen 217 PSRVTLFGESAGAASVVAHLLSPGSRGLF-----HRAILQSGSLNNPWAIVSPGEARQRSTALANLVGCNKTNDTEIVAC 291 (601)
T ss_pred cceEEEeccccchhhhhheecCCCchhhH-----HHHHhhcCCCCCCccccChHHHHHHHHHHHHHhCCCCCChHHHHHH
Confidence 99999999999997776653 1111111 13445566554443343333344444566677777654442 58
Q ss_pred hccCCCcc
Q 017366 240 TSRLSPGL 247 (373)
Q Consensus 240 ~~~~~p~~ 247 (373)
.+..++++
T Consensus 292 lR~~~a~~ 299 (601)
T KOG4389|consen 292 LRSVPAQL 299 (601)
T ss_pred HhcCCHHH
Confidence 87766654
No 104
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=32.25 E-value=40 Score=31.30 Aligned_cols=47 Identities=17% Similarity=0.285 Sum_probs=30.6
Q ss_pred eeEehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 017366 142 LHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 142 l~frG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
+.--|.+.++.+++.+... -....+|++.|+|.||+=+-.-.-...+
T Consensus 55 I~~~g~rL~~eI~~~~~~~-~~~~~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 55 IDVCGERLAEEILEHIKDY-ESKIRKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred hHHHHHHHHHHHHHhcccc-ccccccceEEEecccHHHHHHHHHHhhh
Confidence 4446777777777766542 1224689999999999876554444443
No 105
>PLN02753 triacylglycerol lipase
Probab=31.97 E-value=86 Score=33.65 Aligned_cols=54 Identities=17% Similarity=0.243 Sum_probs=35.7
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhh-CCC-----CcEEEEeeccccccccCCCCchhHHHHHHHH
Q 017366 165 AQNAVLSGCSAGGLTSILHCDNFRAL-FPV-----GTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~v~~~-lp~-----~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (373)
..+|+++|+|-||-=|.+.+.+++.. ++. ...|.++.=++ +.-|+..+.++++.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGs------PRVGN~aFA~~~~~ 370 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGG------PRVGNVRFKDRMEE 370 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCC------CCccCHHHHHHHHh
Confidence 46899999999999999999888764 321 13355555443 23466665666543
No 106
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=31.92 E-value=52 Score=30.46 Aligned_cols=29 Identities=28% Similarity=0.547 Sum_probs=20.7
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
|++.|.+.|+ .--+++|.|||++=+.+.+
T Consensus 16 vl~aL~e~g~---~~d~i~GtS~GAl~aa~~a 44 (215)
T cd07209 16 VLKALAEAGI---EPDIISGTSIGAINGALIA 44 (215)
T ss_pred HHHHHHHcCC---CCCEEEEECHHHHHHHHHH
Confidence 5677777666 2348999999998655543
No 107
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=31.67 E-value=71 Score=27.95 Aligned_cols=21 Identities=33% Similarity=0.396 Sum_probs=16.6
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 017366 165 AQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d 185 (373)
.++|+|.|.|.||.-++..+.
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~ 98 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAA 98 (251)
T ss_pred CCceEEEEeCchHHHHHHHHH
Confidence 367999999999987776554
No 108
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=31.65 E-value=2e+02 Score=25.99 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=29.5
Q ss_pred ehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHH
Q 017366 145 RGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 186 (373)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~ 186 (373)
.|..++...|++...+ -++ .+++|+|.|-|+.-+......
T Consensus 62 ~G~~~~~~~i~~~~~~-CP~-~kivl~GYSQGA~V~~~~~~~ 101 (179)
T PF01083_consen 62 AGVANLVRLIEEYAAR-CPN-TKIVLAGYSQGAMVVGDALSG 101 (179)
T ss_dssp HHHHHHHHHHHHHHHH-STT-SEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-CCC-CCEEEEecccccHHHHHHHHh
Confidence 4777888888877753 343 489999999999876655444
No 109
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=31.47 E-value=65 Score=28.22 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=23.8
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 151 ~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
--|++.|.++++.+ .--.++|.|||++-+...+
T Consensus 14 ~gvl~~l~~~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAERGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHhCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 34567777666542 3357999999999988877
No 110
>PLN02162 triacylglycerol lipase
Probab=30.93 E-value=97 Score=32.82 Aligned_cols=125 Identities=18% Similarity=0.194 Sum_probs=59.2
Q ss_pred ccEEEEeeccccccChhhhhhccCCCCCCcc-cccc--ccccccccCCCCCCCCCccccceEEEecCC-CCccCCCccc-
Q 017366 61 NNWLVHIEGGGWCNNVTTCLERKKTRLGSSK-QMVK--VVAFSGMLSNKQKFNPDFYNWNRIKVRYCD-GASFTGDVEA- 135 (373)
Q Consensus 61 ~k~li~leGGG~C~~~~tC~~r~~t~lgSs~-~~~~--~~~~~Gils~~~~~NP~f~nwN~V~vpYCd-Gd~~~G~~~~- 135 (373)
+.|=.+|-|+=-||+.-.-....+......+ .-++ .+.|.|--+.+. .| -..|.+...+++|. |-+|.|-...
T Consensus 163 ~~w~m~~v~~y~~wn~~~~~~~TQafv~~d~~~d~~~IVVAFRGT~~~~~-~D-WiTDld~s~~~~~~~GkVH~GF~~A~ 240 (475)
T PLN02162 163 NTWKMDLVGNYDFYNAFQESKLTQAFVFKTSSTNPDLIVVSFRGTEPFEA-AD-WCTDLDLSWYELKNVGKVHAGFSRAL 240 (475)
T ss_pred HhcCccccchhhhhhhhhhhcccceEEEEeccCCCceEEEEEccCCCCcH-HH-HHhhcCcceecCCCCeeeeHHHHHHH
Confidence 5677888888888885432221111111000 0011 123334321111 11 13344556667764 6677773221
Q ss_pred ---cc---CCCceeEehHHH---HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 017366 136 ---VN---PANNLHFRGARV---FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 136 ---~~---~~~~l~frG~~n---~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
.+ +....-.+.... +++.+++++.+ .++ .+++++|+|-||-=|.+.+..++.
T Consensus 241 ~~~~~~~~p~~~~~~~~~~ay~~I~~~L~~lL~k-~p~-~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 241 GLQKDGGWPKENISLLHQYAYYTIRQMLRDKLAR-NKN-LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HhhhcccccccccchhhhhhHHHHHHHHHHHHHh-CCC-ceEEEEecChHHHHHHHHHHHHHH
Confidence 00 000111111222 33334444432 333 469999999999888888777764
No 111
>COG0627 Predicted esterase [General function prediction only]
Probab=30.65 E-value=1.5e+02 Score=29.52 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=25.5
Q ss_pred eEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 017366 167 NAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (373)
Q Consensus 167 ~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (373)
+--++|.|.||.||+..+-+--++|+ .+.+.||+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~-----~~sS~Sg~~ 187 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFK-----SASSFSGIL 187 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhc-----eeccccccc
Confidence 78999999999999985554444443 455667654
No 112
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=30.55 E-value=55 Score=32.39 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=23.6
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHH
Q 017366 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 186 (373)
Q Consensus 152 avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~ 186 (373)
-||+.|.++|++ --+++|.|||++=+.+++-.
T Consensus 32 GvL~aLee~gi~---~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 32 GVIKALEEAGIP---VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHcCCC---CCEEEEECHHHHHHHHHHcC
Confidence 367778777775 35899999999877666543
No 113
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=30.52 E-value=51 Score=28.79 Aligned_cols=11 Identities=45% Similarity=0.773 Sum_probs=9.6
Q ss_pred EEEEeeChhhH
Q 017366 168 AVLSGCSAGGL 178 (373)
Q Consensus 168 v~lsG~SAGGl 178 (373)
+++.|.|||++
T Consensus 70 ~vi~G~SAGA~ 80 (154)
T PF03575_consen 70 GVIIGTSAGAM 80 (154)
T ss_dssp SEEEEETHHHH
T ss_pred CEEEEEChHHh
Confidence 78999999993
No 114
>PLN02934 triacylglycerol lipase
Probab=29.79 E-value=99 Score=33.07 Aligned_cols=38 Identities=26% Similarity=0.381 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 017366 150 FQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 150 ~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
++..|++++++ .++ .+|+++|+|-||-=|.+.+..++.
T Consensus 307 v~~~lk~ll~~-~p~-~kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 307 VRSKLKSLLKE-HKN-AKFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHH-CCC-CeEEEeccccHHHHHHHHHHHHHH
Confidence 55556666653 444 469999999998877777766654
No 115
>PRK04940 hypothetical protein; Provisional
Probab=29.75 E-value=1e+02 Score=28.41 Aligned_cols=23 Identities=17% Similarity=0.407 Sum_probs=18.3
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCC
Q 017366 166 QNAVLSGCSAGGLTSILHCDNFRALFP 192 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~~d~v~~~lp 192 (373)
+.++|.|+|-|| +++-++..++.
T Consensus 60 ~~~~liGSSLGG----yyA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGG----YWAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHH----HHHHHHHHHHC
Confidence 569999999999 56667777664
No 116
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=29.72 E-value=93 Score=31.17 Aligned_cols=56 Identities=16% Similarity=0.228 Sum_probs=38.4
Q ss_pred HHHHHHHHH-hCCCccCeEEEEeeChhhHHHHHhhHHHHh--hCCCCcEEEEeeccccccccC
Q 017366 151 QAVMEDLMA-KGMKNAQNAVLSGCSAGGLTSILHCDNFRA--LFPVGTKVKCFADAGYFINAK 210 (373)
Q Consensus 151 ~avl~~l~~-~~l~~a~~v~lsG~SAGGlga~~~~d~v~~--~lp~~~~v~~l~DSG~fld~~ 210 (373)
-..|+.|.. .|+ ..++|-|.|+|-||--|-+-..++.. ++ .+|.+|.=||.++...
T Consensus 135 a~~l~~L~~~~g~-~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki---~rItgLDPAgP~F~~~ 193 (331)
T PF00151_consen 135 AKFLSFLINNFGV-PPENIHLIGHSLGAHVAGFAGKYLKGGGKI---GRITGLDPAGPLFENN 193 (331)
T ss_dssp HHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT---S---SEEEEES-B-TTTTTS
T ss_pred HHHHHHHHhhcCC-ChhHEEEEeeccchhhhhhhhhhccCccee---eEEEecCcccccccCC
Confidence 334555553 344 47889999999999999888888888 55 4689998899877654
No 117
>PLN02847 triacylglycerol lipase
Probab=29.49 E-value=1.3e+02 Score=32.98 Aligned_cols=24 Identities=29% Similarity=0.253 Sum_probs=18.7
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHh
Q 017366 166 QNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
-+|+|+|+|-||-=|.+-+-.+|+
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhc
Confidence 479999999998666666777775
No 118
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=29.44 E-value=66 Score=31.99 Aligned_cols=30 Identities=30% Similarity=0.479 Sum_probs=21.5
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
|++.|.++++. ++ +++|.|||++-+.+.+-
T Consensus 87 vl~aL~e~~l~-~~--~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 87 VVKALWEQDLL-PR--VISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHcCCC-CC--EEEEEcHHHHHHHHHHc
Confidence 45666666664 22 69999999998877663
No 119
>PRK10279 hypothetical protein; Provisional
Probab=29.43 E-value=59 Score=32.15 Aligned_cols=29 Identities=28% Similarity=0.545 Sum_probs=22.3
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
||+.|.+.|++ --+++|+|||++-+.+.+
T Consensus 23 VL~aL~E~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 23 VINALKKVGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred HHHHHHHcCCC---cCEEEEEcHHHHHHHHHH
Confidence 56777777775 358999999998766655
No 120
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.98 E-value=1.2e+02 Score=34.25 Aligned_cols=64 Identities=14% Similarity=0.135 Sum_probs=34.6
Q ss_pred CCccCeEEEEeeChhhHHHHH---hhHHHHhhCCCCcEEEEeeccccccccCCCCchhHHHHHHHHHHHhcCC
Q 017366 162 MKNAQNAVLSGCSAGGLTSIL---HCDNFRALFPVGTKVKCFADAGYFINAKDVSGASHIEQFYAQVVATHGS 231 (373)
Q Consensus 162 l~~a~~v~lsG~SAGGlga~~---~~d~v~~~lp~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~v~~~~~~ 231 (373)
.+.|+.|+|.|+|.||+=|.. +-.++.... + .++.=|. -...++..-...+-+||..+.+.|+.
T Consensus 178 ~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sV----n-tIITlss-PH~a~Pl~~D~~l~~fy~~vnn~W~k 244 (973)
T KOG3724|consen 178 SPLPHSVILVGHSMGGIVARATLTLKNEVQGSV----N-TIITLSS-PHAAPPLPLDRFLLRFYLLVNNYWNK 244 (973)
T ss_pred CCCCceEEEEeccchhHHHHHHHhhhhhccchh----h-hhhhhcC-cccCCCCCCcHHHHHHHHHHHHHHHH
Confidence 456899999999999985433 222222211 1 1111111 11223333445567788888776643
No 121
>PRK13917 plasmid segregation protein ParM; Provisional
Probab=28.91 E-value=1.3e+02 Score=30.09 Aligned_cols=27 Identities=11% Similarity=0.345 Sum_probs=21.1
Q ss_pred CCccCeEEEEeeChhhHHHHHhhHHHHhhCCC
Q 017366 162 MKNAQNAVLSGCSAGGLTSILHCDNFRALFPV 193 (373)
Q Consensus 162 l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~ 193 (373)
..+.++|+|+|.+|- +..++|++.||.
T Consensus 289 ~~~~d~IiL~GGGA~-----ll~~~lk~~f~~ 315 (344)
T PRK13917 289 INSFDRVIVTGGGAN-----IFFDSLSHWYSD 315 (344)
T ss_pred cCCCCEEEEECCcHH-----HHHHHHHHHcCC
Confidence 356788999998763 356999999985
No 122
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=28.78 E-value=62 Score=30.72 Aligned_cols=30 Identities=23% Similarity=0.472 Sum_probs=21.5
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHh
Q 017366 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILH 183 (373)
Q Consensus 152 avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~ 183 (373)
-||+.|.++++... =+++|.|||++=+.+.
T Consensus 15 Gvl~al~e~~~~~f--d~i~GtSaGAi~a~~~ 44 (266)
T cd07208 15 GVLDAFLEAGIRPF--DLVIGVSAGALNAASY 44 (266)
T ss_pred HHHHHHHHcCCCCC--CEEEEECHHHHhHHHH
Confidence 46677777676522 3899999999876654
No 123
>PRK10749 lysophospholipase L2; Provisional
Probab=28.64 E-value=1.7e+02 Score=28.57 Aligned_cols=21 Identities=19% Similarity=0.126 Sum_probs=16.9
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 017366 165 AQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d 185 (373)
.+++.|.|+|.||.-+...+.
T Consensus 130 ~~~~~l~GhSmGG~ia~~~a~ 150 (330)
T PRK10749 130 YRKRYALAHSMGGAILTLFLQ 150 (330)
T ss_pred CCCeEEEEEcHHHHHHHHHHH
Confidence 467999999999988766554
No 124
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=28.63 E-value=1.1e+02 Score=31.05 Aligned_cols=43 Identities=26% Similarity=0.334 Sum_probs=29.5
Q ss_pred HHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCc-EEEEe
Q 017366 151 QAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGT-KVKCF 200 (373)
Q Consensus 151 ~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~-~v~~l 200 (373)
++.++||.++|+. .+-|+|-|.||. ++.-.....|+.+ .|-++
T Consensus 163 ~~Ll~Wl~~~G~~---~~g~~G~SmGG~----~A~laa~~~p~pv~~vp~l 206 (348)
T PF09752_consen 163 RALLHWLEREGYG---PLGLTGISMGGH----MAALAASNWPRPVALVPCL 206 (348)
T ss_pred HHHHHHHHhcCCC---ceEEEEechhHh----hHHhhhhcCCCceeEEEee
Confidence 4567899986555 799999999995 4445566667532 34444
No 125
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=28.57 E-value=86 Score=30.39 Aligned_cols=38 Identities=21% Similarity=0.303 Sum_probs=23.3
Q ss_pred ehHHHHHHHHHHHHHhCCCcc-Ce-EEEEeeChhhHHHHHhh
Q 017366 145 RGARVFQAVMEDLMAKGMKNA-QN-AVLSGCSAGGLTSILHC 184 (373)
Q Consensus 145 rG~~n~~avl~~l~~~~l~~a-~~-v~lsG~SAGGlga~~~~ 184 (373)
|| ..--.+|+.|.+++ ++. +. =+++|.||||+-|...+
T Consensus 13 RG-i~~~~vL~~Le~~~-~~~~~~fD~i~GTSaGaiia~~la 52 (288)
T cd07213 13 KG-IVQLVLLKRLAEEF-PSFLDQIDLFAGTSAGSLIALGLA 52 (288)
T ss_pred HH-HHHHHHHHHHHHhC-cccccceeEEEEeCHHHHHHHHHH
Confidence 44 33445667777653 221 11 28999999998876543
No 126
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=28.54 E-value=70 Score=30.73 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=20.1
Q ss_pred HHHHHHHhCCCcc-CeEEEEeeChhhHHHHHhh
Q 017366 153 VMEDLMAKGMKNA-QNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 153 vl~~l~~~~l~~a-~~v~lsG~SAGGlga~~~~ 184 (373)
|++-|++.+..-- +--.++|.|||++.+...+
T Consensus 18 Vl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~a 50 (252)
T cd07221 18 VTRCLSERAPHLLRDARMFFGASAGALHCVTFL 50 (252)
T ss_pred HHHHHHHhCcchhccCCEEEEEcHHHHHHHHHH
Confidence 4566665432211 1237999999999887664
No 127
>PF04260 DUF436: Protein of unknown function (DUF436) ; InterPro: IPR006340 Members of this family are uncharacterised proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome. ; PDB: 1V8D_C.
Probab=28.23 E-value=65 Score=29.46 Aligned_cols=26 Identities=19% Similarity=0.498 Sum_probs=18.0
Q ss_pred HHHHHHHHHHhCCCccCeEEEEeeCh
Q 017366 150 FQAVMEDLMAKGMKNAQNAVLSGCSA 175 (373)
Q Consensus 150 ~~avl~~l~~~~l~~a~~v~lsG~SA 175 (373)
+++++++|+++.--++.++++-|||-
T Consensus 3 ~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T PF04260_consen 3 LRQALEELLEQANLKPGQIFVVGCST 28 (172)
T ss_dssp HHHHHHHHHHHS---TT-EEEEEE-H
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeeeH
Confidence 67889999987666788999999994
No 128
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=27.81 E-value=2.7e+02 Score=25.66 Aligned_cols=49 Identities=14% Similarity=0.304 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHHHHh--CCCccCeEEEEeeChhhHHH---HHhhHHHHhhCCCC
Q 017366 146 GARVFQAVMEDLMAK--GMKNAQNAVLSGCSAGGLTS---ILHCDNFRALFPVG 194 (373)
Q Consensus 146 G~~n~~avl~~l~~~--~l~~a~~v~lsG~SAGGlga---~~~~d~v~~~lp~~ 194 (373)
|...++.+++.+.+. ..+..+-++|.-+-+||.|+ .+-++.+|+.+|..
T Consensus 103 ~~~~~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGSG~~~~l~~~l~~~y~~~ 156 (216)
T PF00091_consen 103 GEEALEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGSGLGPVLAEMLREEYPKK 156 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTESEEEEEEESSSSHHHHHHHHHHHHHHHTSTTS
T ss_pred ccccccccccccchhhccccccccceecccccceeccccccccchhhhcccccc
Confidence 344778888877752 34888999999888888774 66788999999863
No 129
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=27.65 E-value=74 Score=32.02 Aligned_cols=30 Identities=20% Similarity=0.428 Sum_probs=21.4
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
|++-|.++|+.- + +++|.|||++-+.+.+-
T Consensus 86 VlkaL~e~gl~p-~--~i~GsSaGAivaa~~~~ 115 (323)
T cd07231 86 VVRTLVEHQLLP-R--VIAGSSVGSIVCAIIAT 115 (323)
T ss_pred HHHHHHHcCCCC-C--EEEEECHHHHHHHHHHc
Confidence 456666667642 2 59999999998776654
No 130
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=27.46 E-value=83 Score=30.69 Aligned_cols=41 Identities=22% Similarity=0.364 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCC
Q 017366 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP 192 (373)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp 192 (373)
+.-++||.++|.+. .++.++|+|-|.|.|..-++ +++.+.|
T Consensus 112 y~Di~avye~Lr~~-~g~~~~Iil~G~SiGt~~tv----~Lasr~~ 152 (258)
T KOG1552|consen 112 YADIKAVYEWLRNR-YGSPERIILYGQSIGTVPTV----DLASRYP 152 (258)
T ss_pred hhhHHHHHHHHHhh-cCCCceEEEEEecCCchhhh----hHhhcCC
Confidence 45689999999973 44889999999999987633 4455555
No 131
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=26.92 E-value=74 Score=28.07 Aligned_cols=53 Identities=9% Similarity=0.019 Sum_probs=31.9
Q ss_pred cCCCCccCCCcccccCCCceeEehHHHHHHHHHHHHHhCCCccCeEEEEeeChh
Q 017366 123 YCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAG 176 (373)
Q Consensus 123 YCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~v~lsG~SAG 176 (373)
|+-+|.|.|..........-+-+-....+++++.+.+ .+++++.|+++|--..
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~d~vi~~GDl~~ 54 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNE-TVGPDDTVYHLGDFSF 54 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhh-hcCCCCEEEEeCCCCC
Confidence 6778999997542111001011112234667777775 5788999999996543
No 132
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=26.75 E-value=88 Score=28.92 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=18.5
Q ss_pred ccCeEEEEeeChhhHHHHHhhHH
Q 017366 164 NAQNAVLSGCSAGGLTSILHCDN 186 (373)
Q Consensus 164 ~a~~v~lsG~SAGGlga~~~~d~ 186 (373)
..++++|.|+|.||.-++..+..
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~ 121 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALE 121 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHh
Confidence 34689999999999988876653
No 133
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=26.63 E-value=1.5e+02 Score=29.08 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=25.1
Q ss_pred Ce-EEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecccccc
Q 017366 166 QN-AVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFI 207 (373)
Q Consensus 166 ~~-v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fl 207 (373)
++ ++|.|.|.||.=++..+-. .|..++-.++.|++...
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~----~p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAID----YPERVRAIVVLATSARH 164 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHH----ChHhhheEEEEccCCcC
Confidence 45 9999999999877766544 34334445566665543
No 134
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=26.49 E-value=53 Score=32.70 Aligned_cols=43 Identities=14% Similarity=0.203 Sum_probs=29.0
Q ss_pred CceeEehH-HHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHHhh
Q 017366 140 NNLHFRGA-RVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 140 ~~l~frG~-~n~~avl~~l~~~~l~--~a~~v~lsG~SAGGlga~~~~ 184 (373)
.+.|||+- ......++.|.+ ++ ++++|.++|.|-||.=|++-+
T Consensus 148 e~~yyr~~~~D~~ravd~l~s--lpevD~~rI~v~G~SqGG~lal~~a 193 (320)
T PF05448_consen 148 EDYYYRRVYLDAVRAVDFLRS--LPEVDGKRIGVTGGSQGGGLALAAA 193 (320)
T ss_dssp TT-HHHHHHHHHHHHHHHHHT--STTEEEEEEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh--CCCcCcceEEEEeecCchHHHHHHH
Confidence 46788874 334444566663 65 578999999999997666543
No 135
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=26.15 E-value=80 Score=31.09 Aligned_cols=34 Identities=15% Similarity=0.214 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhh
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHC 184 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~ 184 (373)
.+.++++++.+. ...++|.|.|.|.||.-++..+
T Consensus 121 ~~~~~v~~l~~~--~~~~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 121 YIDKCVDYICRT--SKLDQISLLGICQGGTFSLCYA 154 (350)
T ss_pred HHHHHHHHHHHH--hCCCcccEEEECHHHHHHHHHH
Confidence 467788888863 2457899999999998776543
No 136
>PRK04123 ribulokinase; Provisional
Probab=26.10 E-value=1.4e+02 Score=31.55 Aligned_cols=72 Identities=11% Similarity=0.265 Sum_probs=43.9
Q ss_pred ceEEEecCCCCccCCCcccc-c-------CCCceeEehHHHHHHHHHHHH-----------HhCCCccCeEEEEeeChhh
Q 017366 117 NRIKVRYCDGASFTGDVEAV-N-------PANNLHFRGARVFQAVMEDLM-----------AKGMKNAQNAVLSGCSAGG 177 (373)
Q Consensus 117 N~V~vpYCdGd~~~G~~~~~-~-------~~~~l~frG~~n~~avl~~l~-----------~~~l~~a~~v~lsG~SAGG 177 (373)
..+|+||=+ |.+... + -|.++.+.=..+++||++-+. +.+. ..++|+++| ||
T Consensus 378 gl~f~P~l~-----Ger~P~~~~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~e~l~~~g~-~~~~i~~~G---Gg 448 (548)
T PRK04123 378 GLVALDWFN-----GRRTPLADQRLKGVITGLTLGTDAPDIYRALIEATAFGTRAIMECFEDQGV-PVEEVIAAG---GI 448 (548)
T ss_pred ceEEccccc-----CCCCCCCCCCCceEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcceEEEeC---CC
Confidence 358999844 443321 1 134555655678888876332 2122 467888888 55
Q ss_pred -HHHHHhhHHHHhhCCCCcEE
Q 017366 178 -LTSILHCDNFRALFPVGTKV 197 (373)
Q Consensus 178 -lga~~~~d~v~~~lp~~~~v 197 (373)
--.-+|.+.+++.+...+.+
T Consensus 449 ~s~s~~w~Qi~ADv~g~pV~~ 469 (548)
T PRK04123 449 ARKNPVLMQIYADVLNRPIQV 469 (548)
T ss_pred cccCHHHHHHHHHhcCCceEe
Confidence 45678888899988754433
No 137
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=26.07 E-value=76 Score=29.92 Aligned_cols=40 Identities=18% Similarity=0.110 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHH
Q 017366 147 ARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 187 (373)
Q Consensus 147 ~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v 187 (373)
..-.+++++||.+ .-+++....|+|.|-|++=+.+-+.+.
T Consensus 85 ~~Da~aaldW~~~-~hp~s~~~~l~GfSFGa~Ia~~la~r~ 124 (210)
T COG2945 85 LEDAAAALDWLQA-RHPDSASCWLAGFSFGAYIAMQLAMRR 124 (210)
T ss_pred HHHHHHHHHHHHh-hCCCchhhhhcccchHHHHHHHHHHhc
Confidence 5678999999997 456666678999999997766644443
No 138
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=25.96 E-value=77 Score=32.66 Aligned_cols=16 Identities=31% Similarity=0.461 Sum_probs=13.3
Q ss_pred EEEeeChhhHHHHHhh
Q 017366 169 VLSGCSAGGLTSILHC 184 (373)
Q Consensus 169 ~lsG~SAGGlga~~~~ 184 (373)
.++|.|||++.+.+.+
T Consensus 47 ~IaGtSAGALvAAl~a 62 (382)
T cd07219 47 RVAGTSAGSVIAALVV 62 (382)
T ss_pred eEEEEcHHHHHHHHHH
Confidence 5899999999877654
No 139
>PLN02872 triacylglycerol lipase
Probab=25.87 E-value=1.1e+02 Score=31.40 Aligned_cols=38 Identities=11% Similarity=0.123 Sum_probs=28.2
Q ss_pred eeEehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHH
Q 017366 142 LHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSIL 182 (373)
Q Consensus 142 l~frG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~ 182 (373)
++-.+..-+.++++++++. . .++|.+.|+|.||.-++.
T Consensus 139 ~~e~a~~Dl~a~id~i~~~--~-~~~v~~VGhS~Gg~~~~~ 176 (395)
T PLN02872 139 WQELALYDLAEMIHYVYSI--T-NSKIFIVGHSQGTIMSLA 176 (395)
T ss_pred HHHHHHHHHHHHHHHHHhc--c-CCceEEEEECHHHHHHHH
Confidence 3334556789999998853 2 368999999999987653
No 140
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=25.79 E-value=1e+02 Score=32.29 Aligned_cols=48 Identities=21% Similarity=0.286 Sum_probs=35.5
Q ss_pred ceeEehHHHHHHHHHHHH-------HhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCC
Q 017366 141 NLHFRGARVFQAVMEDLM-------AKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP 192 (373)
Q Consensus 141 ~l~frG~~n~~avl~~l~-------~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp 192 (373)
...|-|+.+.+..|++.. ..--.++..||+.|.|-|| +-+.++|-.+|
T Consensus 135 ~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGG----MLaAWfRlKYP 189 (492)
T KOG2183|consen 135 DARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGG----MLAAWFRLKYP 189 (492)
T ss_pred ChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhh----HHHHHHHhcCh
Confidence 566788888888876543 2222467889999999999 55677887777
No 141
>PRK11071 esterase YqiA; Provisional
Probab=25.60 E-value=1.2e+02 Score=27.25 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
.+.+.++++++. ++ .++++|.|.|.||.=++..+.
T Consensus 46 ~~~~~l~~l~~~-~~-~~~~~lvG~S~Gg~~a~~~a~ 80 (190)
T PRK11071 46 DAAELLESLVLE-HG-GDPLGLVGSSLGGYYATWLSQ 80 (190)
T ss_pred HHHHHHHHHHHH-cC-CCCeEEEEECHHHHHHHHHHH
Confidence 355566666652 32 357999999999987775443
No 142
>COG4099 Predicted peptidase [General function prediction only]
Probab=25.30 E-value=84 Score=31.72 Aligned_cols=43 Identities=19% Similarity=0.298 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhC
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALF 191 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~l 191 (373)
-++.+.+.|.+.---+-.+|.++|-|-||+|++.-...+-+.|
T Consensus 252 ~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfF 294 (387)
T COG4099 252 KIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFF 294 (387)
T ss_pred HHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhh
Confidence 4556666676632234578999999999999998766655555
No 143
>PLN02761 lipase class 3 family protein
Probab=25.21 E-value=1.4e+02 Score=32.01 Aligned_cols=53 Identities=13% Similarity=0.214 Sum_probs=34.1
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhh-CC------CCcEEEEeeccccccccCCCCchhHHHHHHHH
Q 017366 166 QNAVLSGCSAGGLTSILHCDNFRAL-FP------VGTKVKCFADAGYFINAKDVSGASHIEQFYAQ 224 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~~d~v~~~-lp------~~~~v~~l~DSG~fld~~~~~g~~~~~~~~~~ 224 (373)
-+|+++|+|-||-=|.+.+.+|+.. +. ....|.++.=++. --|+..+.++++.
T Consensus 294 ~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsP------RVGN~~FA~~~d~ 353 (527)
T PLN02761 294 ISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGP------RVGNLRFKERCDE 353 (527)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCC------CcCCHHHHHHHHh
Confidence 4799999999998888888888753 22 1223555554432 3356665666654
No 144
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=25.18 E-value=8e+02 Score=25.64 Aligned_cols=115 Identities=14% Similarity=0.106 Sum_probs=58.1
Q ss_pred CCccEEEEeeccccccChhhhhhccCCCCCCccccccccccccccCCCCCCCCCcc--ccceEEEecCC--CCccCCCcc
Q 017366 59 GINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKVRYCD--GASFTGDVE 134 (373)
Q Consensus 59 ~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~vpYCd--Gd~~~G~~~ 134 (373)
..+-++|.|+||=-|-+..-. ....|.-. +...+ ..-..||.=+ ..|+|||--=- |-++.-...
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~----f~E~GP~~-----i~~~~---~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~ 142 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFAL----LAENGPCL-----MNETT---GDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKAD 142 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhh----hccCCCeE-----EeCCC---CceeECCcccccccCeEEEeCCCCcCcccCCCCC
Confidence 346799999999777664322 22333211 11111 1123455111 24667775333 333321111
Q ss_pred cccCCCceeEehHHHHHHHHHHHHHhCCCc--cCeEEEEeeChhhHHHHHhhHHHHhh
Q 017366 135 AVNPANNLHFRGARVFQAVMEDLMAKGMKN--AQNAVLSGCSAGGLTSILHCDNFRAL 190 (373)
Q Consensus 135 ~~~~~~~l~frG~~n~~avl~~l~~~~l~~--a~~v~lsG~SAGGlga~~~~d~v~~~ 190 (373)
+. ... ..-...+.++|+.+++ .++. -..+.|+|.|.||.=+...+.+|.+.
T Consensus 143 --~~-~~~-~~~a~d~~~~l~~f~~-~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~ 195 (462)
T PTZ00472 143 --YD-HNE-SEVSEDMYNFLQAFFG-SHEDLRANDLFVVGESYGGHYAPATAYRINMG 195 (462)
T ss_pred --CC-CCh-HHHHHHHHHHHHHHHH-hCccccCCCEEEEeecchhhhHHHHHHHHHhh
Confidence 11 111 1113334444444443 2443 36799999999998887778787653
No 145
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=25.10 E-value=1.7e+02 Score=26.23 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
..|.+.|+.-+. .+ .+.++|.|+|.|.+.++.+..
T Consensus 40 ~~W~~~l~~~i~-~~--~~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 40 DEWVQALDQAID-AI--DEPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp HHHHHHHHHCCH-C---TTTEEEEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-hc--CCCeEEEEeCHHHHHHHHHHh
Confidence 345555554332 22 344999999999999998886
No 146
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=25.05 E-value=1e+02 Score=29.01 Aligned_cols=68 Identities=15% Similarity=0.141 Sum_probs=39.2
Q ss_pred ccccceEEEecCCCCccCCCc-ccccCCCceeEehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHH
Q 017366 113 FYNWNRIKVRYCDGASFTGDV-EAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSI 181 (373)
Q Consensus 113 f~nwN~V~vpYCdGd~~~G~~-~~~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~ 181 (373)
|..--.||-||=-......-. ..........=-++.-+++.+++-+. +..+-.-+||+|+|-|+.-..
T Consensus 42 F~~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~-~~n~GRPfILaGHSQGs~~l~ 110 (207)
T PF11288_consen 42 FNGVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLA-NYNNGRPFILAGHSQGSMHLL 110 (207)
T ss_pred hhcCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHH-hcCCCCCEEEEEeChHHHHHH
Confidence 555556666654433322221 00011122223456777888887775 566667899999999996544
No 147
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=24.83 E-value=1.5e+02 Score=29.52 Aligned_cols=44 Identities=34% Similarity=0.446 Sum_probs=29.3
Q ss_pred eeEehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCC
Q 017366 142 LHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFP 192 (373)
Q Consensus 142 l~frG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp 192 (373)
..=+|....+-|-+-|. ...|++|.|.|+|+||+-+. ++...++
T Consensus 106 ~~~~~~ql~~~V~~~l~---~~ga~~v~LigHS~GG~~~r----y~~~~~~ 149 (336)
T COG1075 106 LAVRGEQLFAYVDEVLA---KTGAKKVNLIGHSMGGLDSR----YYLGVLG 149 (336)
T ss_pred ccccHHHHHHHHHHHHh---hcCCCceEEEeecccchhhH----HHHhhcC
Confidence 33345555544444444 35679999999999998887 5555555
No 148
>PRK10985 putative hydrolase; Provisional
Probab=24.77 E-value=1.2e+02 Score=29.60 Aligned_cols=33 Identities=15% Similarity=0.045 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHH
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSIL 182 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~ 182 (373)
..+.++++++.++ ++ .+++++.|.|.||.=+..
T Consensus 115 ~D~~~~i~~l~~~-~~-~~~~~~vG~S~GG~i~~~ 147 (324)
T PRK10985 115 EDARFFLRWLQRE-FG-HVPTAAVGYSLGGNMLAC 147 (324)
T ss_pred HHHHHHHHHHHHh-CC-CCCEEEEEecchHHHHHH
Confidence 4567788888753 33 356999999999964443
No 149
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=24.59 E-value=30 Score=33.38 Aligned_cols=43 Identities=26% Similarity=0.246 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhC
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALF 191 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~l 191 (373)
--+++|++|...-.-+-++++|.|-|-||--|+.-+...++++
T Consensus 132 Ds~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri 174 (300)
T KOG4391|consen 132 DSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRI 174 (300)
T ss_pred cHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhhe
Confidence 4689999999765556678999999999966665555555544
No 150
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=24.29 E-value=85 Score=30.54 Aligned_cols=31 Identities=19% Similarity=0.355 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHH
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 186 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~ 186 (373)
||+.|.++|++ -=+++|.|||++-+.+++-.
T Consensus 28 VL~aLeE~gi~---~d~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 28 ILQALEEAGIP---IDAIGGTSIGSFVGGLYARE 58 (269)
T ss_pred HHHHHHHcCCC---ccEEEEECHHHHHHHHHHcC
Confidence 56777766775 34899999999877666543
No 151
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=24.16 E-value=1.6e+02 Score=25.57 Aligned_cols=37 Identities=22% Similarity=0.249 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHH
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDN 186 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~ 186 (373)
.-+.+.++.++++ ++..+ +.+.|.|.||.=++.++..
T Consensus 28 ~~~~~~~~~~~~~-l~~~~-~~~vG~S~Gg~~~~~~a~~ 64 (230)
T PF00561_consen 28 DDLAADLEALREA-LGIKK-INLVGHSMGGMLALEYAAQ 64 (230)
T ss_dssp HHHHHHHHHHHHH-HTTSS-EEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hCCCC-eEEEEECCChHHHHHHHHH
Confidence 3455555555542 33333 9999999999877766644
No 152
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=24.05 E-value=4e+02 Score=27.70 Aligned_cols=132 Identities=14% Similarity=0.088 Sum_probs=64.0
Q ss_pred CCCcEEEecC-CCCCCccEEEEeeccccccChhhhhhccCCCCCCccccccccccccccCCCCCCCCCcc--ccceEEEe
Q 017366 46 SPPAYHFDKG-FGAGINNWLVHIEGGGWCNNVTTCLERKKTRLGSSKQMVKVVAFSGMLSNKQKFNPDFY--NWNRIKVR 122 (373)
Q Consensus 46 Sp~~yy~~~g-~g~~s~k~li~leGGG~C~~~~tC~~r~~t~lgSs~~~~~~~~~~Gils~~~~~NP~f~--nwN~V~vp 122 (373)
+-..|+|-+. .....+-++|.|+||=-|-+..-... .+|.-..-.+... |- ...-..||.=+ ..|++||=
T Consensus 50 ~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~----e~GP~~~~~~~~~--~~-~~~l~~n~~sW~~~anllfiD 122 (433)
T PLN03016 50 VQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIF----ENGPVGLKFEVFN--GS-APSLFSTTYSWTKMANIIFLD 122 (433)
T ss_pred eEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHH----hcCCceeeccccC--CC-CCceeeCCCchhhcCcEEEec
Confidence 4444555332 22345789999999976766543332 2332111000000 10 01224455222 35778884
Q ss_pred --cCCCCccCCCcccccCCCceeEehHHHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHHHHHhhHHHHh
Q 017366 123 --YCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 123 --YCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~--~a~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
-=+|-|+.-+... +.+ .. -....+.+.+..++.. ++ ....+.|+|.|-||.=+..-+.+|.+
T Consensus 123 qPvGtGfSy~~~~~~-~~~-d~-~~a~~~~~fl~~f~~~--~p~~~~~~~yi~GESYaG~yvP~la~~i~~ 188 (433)
T PLN03016 123 QPVGSGFSYSKTPID-KTG-DI-SEVKRTHEFLQKWLSR--HPQYFSNPLYVVGDSYSGMIVPALVQEISQ 188 (433)
T ss_pred CCCCCCccCCCCCCC-ccC-CH-HHHHHHHHHHHHHHHh--ChhhcCCCEEEEccCccceehHHHHHHHHh
Confidence 3334443222110 111 00 1113444555555542 33 24569999999999777666666654
No 153
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=23.85 E-value=2e+02 Score=28.66 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=39.4
Q ss_pred ceeEehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCC-cEEEEeecccc
Q 017366 141 NLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVG-TKVKCFADAGY 205 (373)
Q Consensus 141 ~l~frG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~-~~v~~l~DSG~ 205 (373)
.++.....-.-+...+|.+ +.=++.|.|.|+ ++.-+-.+++.+++. +-|.+++|+|.
T Consensus 238 ~v~~V~d~~A~~~~r~La~------~eGilvG~SsGA--~~~aa~~~a~~~~~g~~IVti~pD~G~ 295 (300)
T COG0031 238 EVIRVSDEEAIATARRLAR------EEGLLVGISSGA--ALAAALKLAKELPAGKTIVTILPDSGE 295 (300)
T ss_pred eEEEECHHHHHHHHHHHHH------HhCeeecccHHH--HHHHHHHHHHhcCCCCeEEEEECCCcc
Confidence 4555555556666677775 345788888886 555667888888744 45888899984
No 154
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=23.83 E-value=1.1e+02 Score=31.24 Aligned_cols=37 Identities=24% Similarity=0.358 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHH
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNF 187 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v 187 (373)
..+++.|+.+... +-++|+|.|+|.||+=+.......
T Consensus 104 ~~lk~~ie~~~~~---~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 104 TKLKQLIEEAYKK---NGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHh---cCCcEEEEEeCCCchHHHHHHHhc
Confidence 3466666666642 278999999999998877665555
No 155
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=23.73 E-value=2.3e+02 Score=25.39 Aligned_cols=21 Identities=24% Similarity=0.134 Sum_probs=16.5
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 017366 165 AQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d 185 (373)
.++++|.|.|.||.=++..+.
T Consensus 95 ~~~~~liG~S~Gg~ia~~~a~ 115 (288)
T TIGR01250 95 LDKFYLLGHSWGGMLAQEYAL 115 (288)
T ss_pred CCcEEEEEeehHHHHHHHHHH
Confidence 356999999999987776543
No 156
>PF04631 Baculo_44: Baculovirus hypothetical protein; InterPro: IPR006725 This family includes several hypothetical baculoviral proteins, with predicted molecular weights of approximately 44 kDa.
Probab=23.68 E-value=45 Score=33.92 Aligned_cols=50 Identities=20% Similarity=0.462 Sum_probs=34.5
Q ss_pred CCccCCCCCCcEEEecCCCCCCccEEE---EeeccccccCh---hhhhhccCCCCCCcccc
Q 017366 39 GAVCLDGSPPAYHFDKGFGAGINNWLV---HIEGGGWCNNV---TTCLERKKTRLGSSKQM 93 (373)
Q Consensus 39 ga~ClDGSp~~yy~~~g~g~~s~k~li---~leGGG~C~~~---~tC~~r~~t~lgSs~~~ 93 (373)
-++|.|.|...||+.+. +|++| .|.-||||... ..|......-+.|...|
T Consensus 94 t~iC~n~sA~yf~V~~~-----dkfvvng~~L~~GgYCttnsvPrnCNreTSvvl~slNqW 149 (371)
T PF04631_consen 94 TSICDNPSAVYFFVGEH-----DKFVVNGQRLSPGGYCTTNSVPRNCNRETSVVLHSLNQW 149 (371)
T ss_pred hhhcCCCcceEEEecCC-----ceEEEcCcCccCCccccCCCcccccCccceEEEEcCCcE
Confidence 46899999888888665 57776 58899999753 47884332235555555
No 157
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=22.56 E-value=91 Score=32.24 Aligned_cols=31 Identities=32% Similarity=0.607 Sum_probs=22.6
Q ss_pred HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 152 AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 152 avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
-|++-|.++|+. ++ +++|.|||++-+.+.+-
T Consensus 84 GVlkaL~e~gll-p~--iI~GtSAGAivaalla~ 114 (407)
T cd07232 84 GVVKALLDADLL-PN--VISGTSGGSLVAALLCT 114 (407)
T ss_pred HHHHHHHhCCCC-CC--EEEEECHHHHHHHHHHc
Confidence 466777776654 22 59999999998777664
No 158
>PLN02578 hydrolase
Probab=22.37 E-value=2.3e+02 Score=27.95 Aligned_cols=25 Identities=32% Similarity=0.486 Sum_probs=18.2
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHh
Q 017366 165 AQNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
.++++|.|.|.||+=++..+....+
T Consensus 151 ~~~~~lvG~S~Gg~ia~~~A~~~p~ 175 (354)
T PLN02578 151 KEPAVLVGNSLGGFTALSTAVGYPE 175 (354)
T ss_pred cCCeEEEEECHHHHHHHHHHHhChH
Confidence 3679999999999876665554333
No 159
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.31 E-value=2.6e+02 Score=27.91 Aligned_cols=49 Identities=22% Similarity=0.343 Sum_probs=29.4
Q ss_pred ccCCCccc--ccCCCceeEehH--HHHHHHHHHHHHhCCC--ccCeEEEEeeChhhHH
Q 017366 128 SFTGDVEA--VNPANNLHFRGA--RVFQAVMEDLMAKGMK--NAQNAVLSGCSAGGLT 179 (373)
Q Consensus 128 ~~~G~~~~--~~~~~~l~frG~--~n~~avl~~l~~~~l~--~a~~v~lsG~SAGGlg 179 (373)
++.|-... .+...++|+||- +.++| ++-|+ +|+ ..++|-++|.|-||-=
T Consensus 135 s~pG~mtrGilD~kd~yyyr~v~~D~~~a-ve~~~--sl~~vde~Ri~v~G~SqGGgl 189 (321)
T COG3458 135 SDPGFMTRGILDRKDTYYYRGVFLDAVRA-VEILA--SLDEVDEERIGVTGGSQGGGL 189 (321)
T ss_pred cCCceeEeecccCCCceEEeeehHHHHHH-HHHHh--ccCccchhheEEeccccCchh
Confidence 45554332 233468888883 33333 23344 465 5689999999998743
No 160
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=22.28 E-value=2.2e+02 Score=26.90 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
+...+.++.++. .+++ .+.|+|+|=||.=|.+-+-.+.+
T Consensus 69 ~~A~~yl~~~~~-~~~~--~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 69 KSALAYLKKIAK-KYPG--KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHH-hCCC--CEEEEEechhhHHHHHHHHHccH
Confidence 333444445443 2333 59999999999766655555433
No 161
>PRK13690 hypothetical protein; Provisional
Probab=22.16 E-value=1.2e+02 Score=28.10 Aligned_cols=28 Identities=18% Similarity=0.450 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhCCCccCeEEEEeeCh
Q 017366 148 RVFQAVMEDLMAKGMKNAQNAVLSGCSA 175 (373)
Q Consensus 148 ~n~~avl~~l~~~~l~~a~~v~lsG~SA 175 (373)
..+++++++|++..--++.+++|-|||-
T Consensus 8 ~~~~~~~~El~~~a~l~~g~i~VvGcST 35 (184)
T PRK13690 8 KQTRQILEELLEQANLKPGQIFVLGCST 35 (184)
T ss_pred HHHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 4578889999976555677899999984
No 162
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=22.13 E-value=1.5e+02 Score=28.99 Aligned_cols=18 Identities=28% Similarity=0.324 Sum_probs=14.7
Q ss_pred CeEEEEeeChhhHHHHHh
Q 017366 166 QNAVLSGCSAGGLTSILH 183 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~ 183 (373)
..++|.|.|.||.-++..
T Consensus 162 ~~~~LvGhSmGG~val~~ 179 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKV 179 (349)
T ss_pred CCEEEEEeccchHHHHHH
Confidence 469999999999877653
No 163
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=21.99 E-value=1.3e+02 Score=29.98 Aligned_cols=66 Identities=20% Similarity=0.212 Sum_probs=45.5
Q ss_pred eeEehHHHHHHHHHHHHHh------CCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCC
Q 017366 142 LHFRGARVFQAVMEDLMAK------GMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDV 212 (373)
Q Consensus 142 l~frG~~n~~avl~~l~~~------~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~ 212 (373)
.+|.=..-++.+.++|++. -.+.|+.=+|+|.|-||+.+++-.-.-=++| =.+++=||.|.+.+.-
T Consensus 147 ~~~~n~~~~~~L~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~F-----G~V~s~Sps~~~~~~~ 218 (299)
T COG2382 147 ELHCNEAYWRFLAQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERF-----GHVLSQSGSFWWTPLD 218 (299)
T ss_pred HhcccHHHHHHHHHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhh-----ceeeccCCccccCccc
Confidence 3345556678888888852 2356788899999999999887543333333 3677888888777543
No 164
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=21.92 E-value=1e+02 Score=31.82 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=20.9
Q ss_pred HHHHHHHhCCCccCeEEEEeeChhhHHHHHhhH
Q 017366 153 VMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 153 vl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d 185 (373)
|++-|.++|+.-- +++|+|||++-+.+.+.
T Consensus 101 v~kaL~e~gl~p~---~i~GtS~Gaivaa~~a~ 130 (391)
T cd07229 101 VVKALWLRGLLPR---IITGTATGALIAALVGV 130 (391)
T ss_pred HHHHHHHcCCCCc---eEEEecHHHHHHHHHHc
Confidence 4566666666322 59999999987666554
No 165
>PRK03592 haloalkane dehalogenase; Provisional
Probab=21.83 E-value=2.7e+02 Score=26.13 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=22.9
Q ss_pred CeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeecc
Q 017366 166 QNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADA 203 (373)
Q Consensus 166 ~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DS 203 (373)
++++|.|.|.||.=++..+ .+.|+.++-.++.++
T Consensus 93 ~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lil~~~ 126 (295)
T PRK03592 93 DDVVLVGHDWGSALGFDWA----ARHPDRVRGIAFMEA 126 (295)
T ss_pred CCeEEEEECHHHHHHHHHH----HhChhheeEEEEECC
Confidence 6799999999998776544 345654444444554
No 166
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=21.64 E-value=43 Score=36.41 Aligned_cols=35 Identities=34% Similarity=0.490 Sum_probs=32.3
Q ss_pred EehHHHHHHHHHHHHHhCCCccCeEEEEeeChhhH
Q 017366 144 FRGARVFQAVMEDLMAKGMKNAQNAVLSGCSAGGL 178 (373)
Q Consensus 144 frG~~n~~avl~~l~~~~l~~a~~v~lsG~SAGGl 178 (373)
++...-+.||.++|+.+|+..|+++=+-|.|=|||
T Consensus 478 q~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGL 512 (648)
T COG1505 478 QNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGL 512 (648)
T ss_pred hhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCce
Confidence 45678899999999999999999999999999997
No 167
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=21.26 E-value=1.4e+02 Score=26.71 Aligned_cols=23 Identities=26% Similarity=0.228 Sum_probs=17.9
Q ss_pred ccCeEEEEeeChhhHHHHHhhHH
Q 017366 164 NAQNAVLSGCSAGGLTSILHCDN 186 (373)
Q Consensus 164 ~a~~v~lsG~SAGGlga~~~~d~ 186 (373)
.-++++|.|.|.||.-++..+-.
T Consensus 64 ~~~~~~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 64 NILPYWLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred CCCCeEEEEECHHHHHHHHHHHh
Confidence 34789999999999877765443
No 168
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=21.15 E-value=1.1e+02 Score=31.46 Aligned_cols=34 Identities=24% Similarity=0.345 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHh---C-C---CccCeEEEEeeChhhHHHHH
Q 017366 149 VFQAVMEDLMAK---G-M---KNAQNAVLSGCSAGGLTSIL 182 (373)
Q Consensus 149 n~~avl~~l~~~---~-l---~~a~~v~lsG~SAGGlga~~ 182 (373)
-+.++|++|++. . + -++.+|.+.|+|-||+.++.
T Consensus 135 dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~ 175 (365)
T COG4188 135 DISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAME 175 (365)
T ss_pred cHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHH
Confidence 477888988864 2 3 26789999999999998653
No 169
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=21.05 E-value=2.3e+02 Score=29.14 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=46.1
Q ss_pred cccceEEEecCCCCccCCCcccccCCCceeEehHHHHHHHHHHHHHhCCCccCeEEEEee---------------ChhhH
Q 017366 114 YNWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAKGMKNAQNAVLSGC---------------SAGGL 178 (373)
Q Consensus 114 ~nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~~l~~a~~v~lsG~---------------SAGGl 178 (373)
.+|..++||=..|.+--|+.-. | -.=-=..|+..+...|.++.| .-++|++||. |.|.+
T Consensus 143 ~~~G~~ii~P~~g~la~~~~g~---g--r~~~~~~I~~~~~~~~~~~~l-~gk~vlITgG~T~E~ID~VR~isN~SSG~~ 216 (399)
T PRK05579 143 RSRGVEIIGPASGRLACGDVGP---G--RMAEPEEIVAAAERALSPKDL-AGKRVLITAGPTREPIDPVRYITNRSSGKM 216 (399)
T ss_pred HHCCCEEECCCCccccCCCcCC---C--CCCCHHHHHHHHHHHhhhccc-CCCEEEEeCCCccccccceeeeccCCcchH
Confidence 3677888887776665554221 0 000114566666655543334 3478999999 99988
Q ss_pred HHHHhhHHHHhhCCCCcEEEEee
Q 017366 179 TSILHCDNFRALFPVGTKVKCFA 201 (373)
Q Consensus 179 ga~~~~d~v~~~lp~~~~v~~l~ 201 (373)
|..+--...+ .+++|.++.
T Consensus 217 G~aiA~~l~~----~Ga~V~~v~ 235 (399)
T PRK05579 217 GYALARAAAR----RGADVTLVS 235 (399)
T ss_pred HHHHHHHHHH----CCCEEEEeC
Confidence 8766433333 367777764
No 170
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=21.03 E-value=1.5e+02 Score=29.55 Aligned_cols=67 Identities=21% Similarity=0.287 Sum_probs=38.3
Q ss_pred ccceEEEecCCCCccCCCcccccCCCceeEehHHHHHHHHHHHHHh--CCCccCeEEEEeeChhhHHHHHhhHHHHh
Q 017366 115 NWNRIKVRYCDGASFTGDVEAVNPANNLHFRGARVFQAVMEDLMAK--GMKNAQNAVLSGCSAGGLTSILHCDNFRA 189 (373)
Q Consensus 115 nwN~V~vpYCdGd~~~G~~~~~~~~~~l~frG~~n~~avl~~l~~~--~l~~a~~v~lsG~SAGGlga~~~~d~v~~ 189 (373)
+|..|.+.-.+ +|.|-... .| =|=..-+.+.+++|... |..+.++|||.|+|-|.--++.+......
T Consensus 63 ~wsl~q~~LsS--Sy~G~G~~-----SL-~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~ 131 (303)
T PF08538_consen 63 GWSLFQVQLSS--SYSGWGTS-----SL-DRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNP 131 (303)
T ss_dssp T-EEEEE--GG--GBTTS-S-------H-HHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT
T ss_pred CeEEEEEEecC--ccCCcCcc-----hh-hhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCc
Confidence 68888887654 44453221 00 01144678889999974 44578999999999999988876665553
No 171
>CHL00024 psbI photosystem II protein I
Probab=20.95 E-value=56 Score=22.28 Aligned_cols=12 Identities=50% Similarity=0.634 Sum_probs=11.0
Q ss_pred ccccCCCCCCCC
Q 017366 100 SGMLSNKQKFNP 111 (373)
Q Consensus 100 ~Gils~~~~~NP 111 (373)
-|.||+|+..||
T Consensus 21 fGFlsnDp~RnP 32 (36)
T CHL00024 21 FGFLSNDPGRNP 32 (36)
T ss_pred ccccCCCCCCCC
Confidence 489999999999
No 172
>TIGR01440 conserved hypothetical protein TIGR01440. Members of this family are uncharacterized proteins of about 180 amino acids from the Bacillus/Clostridium group of Gram-positive bacteria, found in no more than one copy per genome.
Probab=20.84 E-value=1.1e+02 Score=28.04 Aligned_cols=27 Identities=22% Similarity=0.409 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhCCCccCeEEEEeeCh
Q 017366 149 VFQAVMEDLMAKGMKNAQNAVLSGCSA 175 (373)
Q Consensus 149 n~~avl~~l~~~~l~~a~~v~lsG~SA 175 (373)
.++.++++|++...-++.++++-|||-
T Consensus 2 ~~~~~~~El~~~a~l~~g~i~VvGcST 28 (172)
T TIGR01440 2 QLTTVLEELKDASNLKKGDLFVIGCST 28 (172)
T ss_pred hHHHHHHHHHHhhCCCCCCEEEEecch
Confidence 367889999986555677899999984
No 173
>PRK02655 psbI photosystem II reaction center I protein I; Provisional
Probab=20.68 E-value=57 Score=22.44 Aligned_cols=12 Identities=42% Similarity=0.587 Sum_probs=11.0
Q ss_pred ccccCCCCCCCC
Q 017366 100 SGMLSNKQKFNP 111 (373)
Q Consensus 100 ~Gils~~~~~NP 111 (373)
-|.||+|+..||
T Consensus 21 FGflsnDP~RnP 32 (38)
T PRK02655 21 FGFLSSDPTRNP 32 (38)
T ss_pred cccCCCCCCCCC
Confidence 489999999999
No 174
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=20.53 E-value=2.7e+02 Score=28.39 Aligned_cols=43 Identities=21% Similarity=0.199 Sum_probs=25.3
Q ss_pred cCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccccccCCC
Q 017366 165 AQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYFINAKDV 212 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~fld~~~~ 212 (373)
...+|+.|+|-|| .-+-++|..+|. .-.-.++-|+...-..++
T Consensus 112 ~~pwI~~GgSY~G----~Laaw~r~kyP~-~~~ga~ASSapv~a~~df 154 (434)
T PF05577_consen 112 NSPWIVFGGSYGG----ALAAWFRLKYPH-LFDGAWASSAPVQAKVDF 154 (434)
T ss_dssp C--EEEEEETHHH----HHHHHHHHH-TT-T-SEEEEET--CCHCCTT
T ss_pred CCCEEEECCcchh----HHHHHHHhhCCC-eeEEEEeccceeeeeccc
Confidence 3468888888777 445578999996 445666777776655554
No 175
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=20.44 E-value=1e+02 Score=30.48 Aligned_cols=36 Identities=31% Similarity=0.321 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHhCC---------CccCeEEEEeeChhhHHHHHhhH
Q 017366 149 VFQAVMEDLMAKGM---------KNAQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 149 n~~avl~~l~~~~l---------~~a~~v~lsG~SAGGlga~~~~d 185 (373)
-..+|++||.+ || .+-+++.|+|+|-||-.|+.-+=
T Consensus 95 ~aa~V~~WL~~-gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlAL 139 (307)
T PF07224_consen 95 SAASVINWLPE-GLQHVLPENVEANLSKLALSGHSRGGKTAFALAL 139 (307)
T ss_pred HHHHHHHHHHh-hhhhhCCCCcccccceEEEeecCCccHHHHHHHh
Confidence 46678888874 32 35689999999999988876554
No 176
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=20.44 E-value=72 Score=32.95 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=32.0
Q ss_pred EehHHHHH--HHHHHHHHhCCCccCeEEEEeeChhhHHHHHhhHHHHhhCCCCcEEEEeeccccc
Q 017366 144 FRGARVFQ--AVMEDLMAKGMKNAQNAVLSGCSAGGLTSILHCDNFRALFPVGTKVKCFADAGYF 206 (373)
Q Consensus 144 frG~~n~~--avl~~l~~~~l~~a~~v~lsG~SAGGlga~~~~d~v~~~lp~~~~v~~l~DSG~f 206 (373)
+-|...++ .++|+|.+.-.-++++|-++|.|.||+=|++- ..|.+. |++.+=+|++
T Consensus 202 ~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~L-----aALDdR--Ika~v~~~~l 259 (390)
T PF12715_consen 202 LAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWL-----AALDDR--IKATVANGYL 259 (390)
T ss_dssp HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHH-----HHH-TT----EEEEES-B
T ss_pred HHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHH-----HHcchh--hHhHhhhhhh
Confidence 34444443 35677775444478999999999999876542 334333 4555545554
No 177
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=20.28 E-value=2.9e+02 Score=25.74 Aligned_cols=32 Identities=13% Similarity=0.190 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHhC--CCccCeEEEEeeChhh
Q 017366 146 GARVFQAVMEDLMAKG--MKNAQNAVLSGCSAGG 177 (373)
Q Consensus 146 G~~n~~avl~~l~~~~--l~~a~~v~lsG~SAGG 177 (373)
+...++..+++|.... -.+++.||++|-..-+
T Consensus 15 ~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~ 48 (243)
T cd07386 15 LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDG 48 (243)
T ss_pred hHHHHHHHHHHHcCCcccccCccEEEEeCCcccc
Confidence 3456677777776310 1267999999987765
No 178
>PHA02857 monoglyceride lipase; Provisional
Probab=20.18 E-value=1.7e+02 Score=27.01 Aligned_cols=21 Identities=33% Similarity=0.308 Sum_probs=16.5
Q ss_pred cCeEEEEeeChhhHHHHHhhH
Q 017366 165 AQNAVLSGCSAGGLTSILHCD 185 (373)
Q Consensus 165 a~~v~lsG~SAGGlga~~~~d 185 (373)
.+.++|.|.|.||.=|+..+.
T Consensus 96 ~~~~~lvG~S~GG~ia~~~a~ 116 (276)
T PHA02857 96 GVPVFLLGHSMGATISILAAY 116 (276)
T ss_pred CCCEEEEEcCchHHHHHHHHH
Confidence 456999999999987766553
Done!