Query 017367
Match_columns 373
No_of_seqs 347 out of 2261
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 07:57:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017367.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017367hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 1.3E-61 2.7E-66 455.1 28.9 298 1-361 132-445 (452)
2 PLN02533 probable purple acid 100.0 1.1E-58 2.4E-63 449.8 33.5 294 1-357 125-422 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 1.5E-48 3.3E-53 365.0 30.3 276 18-353 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 4.1E-35 8.9E-40 276.1 28.4 262 19-362 26-338 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 8.7E-33 1.9E-37 256.3 25.1 244 20-338 1-275 (277)
6 cd07395 MPP_CSTP1 Homo sapiens 100.0 4.2E-30 9.1E-35 236.4 24.4 204 19-259 4-236 (262)
7 KOG2679 Purple (tartrate-resis 99.9 4.5E-26 9.8E-31 198.9 20.1 255 18-350 42-326 (336)
8 cd07396 MPP_Nbla03831 Homo sap 99.9 2.9E-26 6.2E-31 211.3 18.6 197 20-259 1-246 (267)
9 cd07402 MPP_GpdQ Enterobacter 99.9 1E-25 2.2E-30 204.6 20.3 192 21-260 1-213 (240)
10 PRK11148 cyclic 3',5'-adenosin 99.9 1.8E-24 3.9E-29 200.2 23.6 192 18-259 13-225 (275)
11 cd07401 MPP_TMEM62_N Homo sapi 99.9 1.6E-23 3.5E-28 191.5 20.4 193 22-239 2-216 (256)
12 cd00842 MPP_ASMase acid sphing 99.9 1.1E-20 2.5E-25 176.8 19.0 183 35-237 56-265 (296)
13 cd07399 MPP_YvnB Bacillus subt 99.9 7.9E-21 1.7E-25 169.2 16.0 149 20-237 1-165 (214)
14 cd07393 MPP_DR1119 Deinococcus 99.8 2.4E-18 5.2E-23 155.2 16.8 191 22-257 1-226 (232)
15 cd08163 MPP_Cdc1 Saccharomyces 99.8 8.6E-18 1.9E-22 153.1 18.3 171 37-236 36-231 (257)
16 cd07392 MPP_PAE1087 Pyrobaculu 99.8 8.9E-18 1.9E-22 146.3 16.7 167 22-234 1-174 (188)
17 TIGR03729 acc_ester putative p 99.8 3.8E-18 8.3E-23 154.7 14.4 176 21-234 1-222 (239)
18 PF00149 Metallophos: Calcineu 99.8 6.1E-19 1.3E-23 150.0 8.5 188 20-233 1-200 (200)
19 cd07383 MPP_Dcr2 Saccharomyces 99.8 7.4E-18 1.6E-22 148.6 15.1 150 19-237 2-180 (199)
20 TIGR03767 P_acnes_RR metalloph 99.8 1.6E-17 3.5E-22 159.4 17.5 114 140-256 290-416 (496)
21 PF09423 PhoD: PhoD-like phosp 99.7 5.1E-16 1.1E-20 153.6 22.0 231 2-237 90-381 (453)
22 COG1409 Icc Predicted phosphoh 99.7 1.2E-16 2.7E-21 149.1 16.7 179 20-233 1-193 (301)
23 cd07400 MPP_YydB Bacillus subt 99.7 6E-16 1.3E-20 129.2 13.6 132 22-256 1-144 (144)
24 cd07388 MPP_Tt1561 Thermus the 99.7 4.4E-15 9.5E-20 132.0 18.7 174 18-231 3-189 (224)
25 cd07385 MPP_YkuE_C Bacillus su 99.7 2.7E-15 5.8E-20 134.6 15.2 187 19-259 1-206 (223)
26 TIGR03768 RPA4764 metallophosp 99.7 5.8E-15 1.3E-19 140.4 17.7 93 140-233 291-411 (492)
27 cd07404 MPP_MS158 Microscilla 99.6 7E-16 1.5E-20 132.0 10.4 145 22-236 1-152 (166)
28 KOG1432 Predicted DNA repair e 99.6 4.1E-14 8.8E-19 128.5 21.5 256 18-354 52-377 (379)
29 PRK11340 phosphodiesterase Yae 99.6 8.1E-15 1.7E-19 135.2 16.0 164 19-239 49-220 (271)
30 cd00840 MPP_Mre11_N Mre11 nucl 99.6 8.5E-15 1.8E-19 131.1 13.8 185 21-236 1-204 (223)
31 PF14008 Metallophos_C: Iron/z 99.6 3.1E-15 6.6E-20 105.6 6.1 43 305-349 20-62 (62)
32 cd07397 MPP_DevT Myxococcus xa 99.5 4.5E-13 9.7E-18 119.4 17.8 195 20-255 1-232 (238)
33 cd07379 MPP_239FB Homo sapiens 99.5 8.3E-13 1.8E-17 109.0 12.5 116 21-234 1-117 (135)
34 COG3540 PhoD Phosphodiesterase 99.5 4.6E-13 9.9E-18 126.6 11.7 224 2-235 125-420 (522)
35 PF12850 Metallophos_2: Calcin 99.5 1.3E-12 2.8E-17 110.1 13.0 138 20-259 1-139 (156)
36 cd00838 MPP_superfamily metall 99.4 2.7E-12 5.9E-17 103.9 12.4 116 23-237 1-119 (131)
37 COG1408 Predicted phosphohydro 99.4 1E-11 2.2E-16 114.4 14.5 75 18-116 43-120 (284)
38 cd07394 MPP_Vps29 Homo sapiens 99.3 2.8E-10 6E-15 98.2 20.4 40 212-259 97-136 (178)
39 TIGR00040 yfcE phosphoesterase 99.3 6E-11 1.3E-15 100.6 15.2 61 20-113 1-63 (158)
40 KOG3770 Acid sphingomyelinase 99.3 3.8E-11 8.3E-16 117.1 15.5 179 36-236 199-407 (577)
41 PRK05340 UDP-2,3-diacylglucosa 99.3 2.6E-11 5.6E-16 110.1 12.9 178 20-235 1-201 (241)
42 cd08166 MPP_Cdc1_like_1 unchar 99.3 1.9E-11 4E-16 105.7 10.8 40 188-237 112-151 (195)
43 cd00841 MPP_YfcE Escherichia c 99.3 2.4E-11 5.2E-16 102.6 10.5 57 187-260 77-133 (155)
44 COG1768 Predicted phosphohydro 99.2 1.4E-10 3E-15 96.3 11.7 189 20-256 1-219 (230)
45 COG2129 Predicted phosphoester 99.2 3.2E-10 7E-15 98.4 14.5 189 19-256 3-203 (226)
46 cd07403 MPP_TTHA0053 Thermus t 99.2 1.1E-10 2.3E-15 95.4 10.7 49 187-236 58-106 (129)
47 PF14582 Metallophos_3: Metall 99.2 5.4E-10 1.2E-14 96.7 14.1 177 19-235 5-220 (255)
48 TIGR01854 lipid_A_lpxH UDP-2,3 99.2 1.1E-09 2.5E-14 98.7 16.3 183 23-257 2-217 (231)
49 cd07384 MPP_Cdc1_like Saccharo 99.2 3.6E-10 7.8E-15 96.9 12.3 32 188-237 119-150 (171)
50 PRK09453 phosphodiesterase; Pr 99.2 2.7E-09 5.8E-14 92.6 17.3 75 20-114 1-76 (182)
51 cd08165 MPP_MPPE1 human MPPE1 99.2 4.6E-10 9.9E-15 94.8 11.9 53 41-114 34-89 (156)
52 cd00845 MPP_UshA_N_like Escher 99.1 2.5E-09 5.5E-14 97.7 15.6 175 20-235 1-208 (252)
53 TIGR00583 mre11 DNA repair pro 99.1 1.2E-08 2.6E-13 98.6 19.1 40 19-58 3-55 (405)
54 cd07389 MPP_PhoD Bacillus subt 99.1 4.1E-09 8.9E-14 94.8 14.2 178 21-236 1-207 (228)
55 cd07406 MPP_CG11883_N Drosophi 99.0 6.8E-09 1.5E-13 95.1 14.1 194 20-262 1-228 (257)
56 cd07410 MPP_CpdB_N Escherichia 99.0 1.2E-08 2.6E-13 94.6 15.5 206 20-261 1-251 (277)
57 cd07398 MPP_YbbF-LpxH Escheric 99.0 3.1E-09 6.8E-14 94.7 11.0 197 23-256 1-216 (217)
58 COG0420 SbcD DNA repair exonuc 98.9 1.2E-08 2.7E-13 99.2 13.2 75 20-116 1-90 (390)
59 cd07411 MPP_SoxB_N Thermus the 98.9 1.3E-07 2.8E-12 87.0 18.0 172 20-233 1-219 (264)
60 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.9 6.5E-08 1.4E-12 88.3 15.4 189 22-238 1-234 (262)
61 cd08164 MPP_Ted1 Saccharomyces 98.9 4.6E-09 9.9E-14 90.7 7.4 32 188-237 129-160 (193)
62 COG0622 Predicted phosphoester 98.9 1.3E-07 2.9E-12 80.5 16.2 38 20-57 2-40 (172)
63 PHA02546 47 endonuclease subun 98.9 8.4E-08 1.8E-12 91.5 15.7 74 20-114 1-89 (340)
64 cd07408 MPP_SA0022_N Staphyloc 98.8 7.6E-08 1.7E-12 88.2 13.7 202 20-261 1-236 (257)
65 COG2908 Uncharacterized protei 98.8 1.3E-08 2.9E-13 89.4 8.1 191 23-258 1-216 (237)
66 cd07412 MPP_YhcR_N Bacillus su 98.8 2E-07 4.3E-12 86.8 15.7 211 20-262 1-265 (288)
67 cd07409 MPP_CD73_N CD73 ecto-5 98.7 4.2E-07 9E-12 84.4 15.8 174 20-234 1-219 (281)
68 PRK04036 DNA polymerase II sma 98.6 4.8E-07 1E-11 90.5 14.3 201 18-256 242-467 (504)
69 PRK09419 bifunctional 2',3'-cy 98.6 1.4E-06 2.9E-11 95.8 18.6 184 18-234 659-883 (1163)
70 cd07386 MPP_DNA_pol_II_small_a 98.6 1.1E-06 2.5E-11 79.7 14.1 195 23-256 2-218 (243)
71 cd07407 MPP_YHR202W_N Saccharo 98.6 3.3E-06 7.2E-11 78.2 17.2 205 19-263 5-254 (282)
72 cd07405 MPP_UshA_N Escherichia 98.6 4.6E-06 1E-10 77.6 17.8 187 20-234 1-222 (285)
73 TIGR00619 sbcd exonuclease Sbc 98.6 2.3E-07 5E-12 84.7 8.7 73 20-114 1-88 (253)
74 cd07382 MPP_DR1281 Deinococcus 98.6 3.4E-06 7.3E-11 76.7 16.2 189 21-259 1-200 (255)
75 cd07424 MPP_PrpA_PrpB PrpA and 98.5 1.3E-07 2.9E-12 83.8 6.1 37 21-57 2-40 (207)
76 cd07390 MPP_AQ1575 Aquifex aeo 98.5 1.1E-06 2.3E-11 75.3 11.1 63 23-114 2-82 (168)
77 cd07425 MPP_Shelphs Shewanella 98.5 1.7E-07 3.8E-12 82.9 6.4 23 212-234 158-180 (208)
78 PRK10966 exonuclease subunit S 98.5 4.9E-07 1.1E-11 88.0 9.1 74 20-115 1-88 (407)
79 TIGR00282 metallophosphoestera 98.4 6.3E-05 1.4E-09 68.7 19.0 192 20-260 1-204 (266)
80 KOG3662 Cell division control 98.4 4.2E-06 9.2E-11 79.6 11.6 113 18-161 47-183 (410)
81 COG0737 UshA 5'-nucleotidase/2 98.3 2.5E-05 5.4E-10 78.9 16.2 212 18-263 25-274 (517)
82 PRK09558 ushA bifunctional UDP 98.2 1.9E-05 4.1E-10 80.3 14.3 188 18-233 33-257 (551)
83 cd08162 MPP_PhoA_N Synechococc 98.2 1.6E-05 3.5E-10 74.8 11.9 39 20-58 1-51 (313)
84 TIGR01530 nadN NAD pyrophospha 98.2 3.8E-05 8.3E-10 78.0 15.0 174 20-234 1-219 (550)
85 COG4186 Predicted phosphoester 98.2 5.3E-05 1.1E-09 62.0 12.5 66 21-114 5-86 (186)
86 cd07391 MPP_PF1019 Pyrococcus 98.2 5E-06 1.1E-10 71.4 6.7 70 23-114 1-88 (172)
87 cd07380 MPP_CWF19_N Schizosacc 98.1 1.3E-05 2.7E-10 66.9 8.5 50 187-236 71-126 (150)
88 PRK09418 bifunctional 2',3'-cy 98.0 0.00018 4E-09 75.2 16.4 76 173-262 234-310 (780)
89 PHA02239 putative protein phos 98.0 1.4E-05 3E-10 72.0 7.0 70 20-114 1-73 (235)
90 PRK11907 bifunctional 2',3'-cy 98.0 0.00026 5.5E-09 74.3 16.9 194 18-233 114-354 (814)
91 PRK09419 bifunctional 2',3'-cy 98.0 0.00013 2.8E-09 80.6 15.2 58 172-234 223-281 (1163)
92 KOG2863 RNA lariat debranching 98.0 8.8E-05 1.9E-09 68.6 11.4 182 20-232 1-229 (456)
93 PRK00166 apaH diadenosine tetr 97.9 2.4E-05 5.3E-10 72.0 6.1 67 20-114 1-69 (275)
94 TIGR00024 SbcD_rel_arch putati 97.9 4.7E-05 1E-09 68.1 7.5 70 20-114 15-102 (225)
95 COG1311 HYS2 Archaeal DNA poly 97.8 0.00052 1.1E-08 66.4 14.7 89 18-116 224-323 (481)
96 cd07423 MPP_PrpE Bacillus subt 97.7 4.6E-05 1E-09 68.8 5.7 68 21-114 2-80 (234)
97 cd07387 MPP_PolD2_C PolD2 (DNA 97.7 0.0012 2.7E-08 59.9 13.7 191 22-236 2-218 (257)
98 TIGR01390 CycNucDiestase 2',3' 97.7 0.00056 1.2E-08 70.4 12.9 54 174-233 186-240 (626)
99 PRK11439 pphA serine/threonine 97.6 0.00013 2.7E-09 65.2 6.0 37 21-57 18-56 (218)
100 PRK13625 bis(5'-nucleosyl)-tet 97.6 0.0001 2.2E-09 67.0 5.4 68 20-113 1-78 (245)
101 COG1692 Calcineurin-like phosp 97.5 0.026 5.7E-07 50.1 19.4 185 20-253 1-195 (266)
102 cd07413 MPP_PA3087 Pseudomonas 97.5 0.00015 3.2E-09 65.0 5.7 67 22-114 1-76 (222)
103 PRK09968 serine/threonine-spec 97.5 0.00012 2.6E-09 65.4 5.0 38 20-57 15-54 (218)
104 COG1407 Predicted ICC-like pho 97.5 0.0003 6.5E-09 62.4 7.3 73 20-114 20-110 (235)
105 PRK09420 cpdB bifunctional 2', 97.5 0.0018 3.9E-08 67.0 13.7 58 170-233 205-263 (649)
106 cd07422 MPP_ApaH Escherichia c 97.5 0.00021 4.6E-09 65.2 5.7 64 23-114 2-67 (257)
107 cd07421 MPP_Rhilphs Rhilph pho 97.4 0.00043 9.4E-09 63.6 6.6 37 21-57 3-46 (304)
108 TIGR00668 apaH bis(5'-nucleosy 97.3 0.00037 8.1E-09 63.8 5.7 65 21-113 2-68 (279)
109 cd00144 MPP_PPP_family phospho 97.3 0.00047 1E-08 61.6 5.6 65 24-114 2-68 (225)
110 COG5555 Cytolysin, a secreted 97.2 0.00089 1.9E-08 60.2 6.5 136 100-236 169-337 (392)
111 cd07381 MPP_CapA CapA and rela 97.1 0.011 2.4E-07 53.5 12.8 136 91-236 69-222 (239)
112 smart00854 PGA_cap Bacterial c 96.9 0.022 4.7E-07 51.5 13.0 136 91-236 65-220 (239)
113 KOG3947 Phosphoesterases [Gene 96.9 0.025 5.4E-07 51.0 12.5 68 19-116 61-128 (305)
114 PF13277 YmdB: YmdB-like prote 96.8 0.042 9.1E-07 49.4 13.1 187 23-259 1-198 (253)
115 KOG3325 Membrane coat complex 96.7 0.022 4.7E-07 46.5 9.9 40 211-258 97-136 (183)
116 KOG2310 DNA repair exonuclease 96.3 0.019 4.2E-07 56.3 8.8 41 19-59 13-66 (646)
117 cd07416 MPP_PP2B PP2B, metallo 96.3 0.0085 1.8E-07 56.2 5.9 37 21-57 44-81 (305)
118 PF09587 PGA_cap: Bacterial ca 96.2 0.098 2.1E-06 47.6 12.7 136 92-237 68-232 (250)
119 cd07420 MPP_RdgC Drosophila me 96.0 0.012 2.6E-07 55.4 5.6 23 210-232 253-275 (321)
120 smart00156 PP2Ac Protein phosp 96.0 0.016 3.4E-07 53.5 6.3 38 20-57 28-66 (271)
121 cd07415 MPP_PP2A_PP4_PP6 PP2A, 95.8 0.015 3.2E-07 54.0 5.4 23 210-232 214-236 (285)
122 cd07414 MPP_PP1_PPKL PP1, PPKL 95.7 0.016 3.5E-07 54.0 5.1 37 21-57 51-88 (293)
123 PTZ00239 serine/threonine prot 95.7 0.019 4.1E-07 53.7 5.5 23 210-232 215-237 (303)
124 cd07418 MPP_PP7 PP7, metalloph 95.5 0.032 7E-07 53.5 6.2 21 210-230 273-293 (377)
125 KOG4419 5' nucleotidase [Nucle 95.1 0.34 7.4E-06 48.5 12.3 57 166-234 211-270 (602)
126 PTZ00244 serine/threonine-prot 95.1 0.033 7.2E-07 51.9 5.1 23 210-232 224-246 (294)
127 PTZ00480 serine/threonine-prot 95.1 0.04 8.7E-07 51.8 5.5 23 210-232 231-253 (320)
128 cd07417 MPP_PP5_C PP5, C-termi 94.6 0.076 1.7E-06 50.0 6.1 23 210-232 233-255 (316)
129 cd07419 MPP_Bsu1_C Arabidopsis 94.5 0.1 2.2E-06 49.2 6.6 21 210-230 242-262 (311)
130 PF04042 DNA_pol_E_B: DNA poly 93.5 0.048 1E-06 48.1 2.3 83 22-116 1-93 (209)
131 PTZ00235 DNA polymerase epsilo 88.2 2.5 5.4E-05 39.0 7.9 80 19-114 27-122 (291)
132 KOG0372 Serine/threonine speci 77.4 5.2 0.00011 35.9 5.2 36 22-57 45-81 (303)
133 KOG0374 Serine/threonine speci 75.8 2.9 6.3E-05 39.7 3.5 23 210-232 233-255 (331)
134 KOG0371 Serine/threonine prote 67.1 9.9 0.00021 34.4 4.6 35 21-57 61-98 (319)
135 KOG0373 Serine/threonine speci 64.3 16 0.00034 32.3 5.1 34 22-57 48-84 (306)
136 KOG2476 Uncharacterized conser 52.8 38 0.00083 33.3 6.1 37 19-57 5-46 (528)
137 PRK09968 serine/threonine-spec 44.8 18 0.0004 32.0 2.6 29 220-256 178-206 (218)
138 COG2843 PgsA Putative enzyme o 40.8 65 0.0014 31.1 5.7 62 169-237 210-272 (372)
139 KOG0375 Serine-threonine phosp 40.6 35 0.00075 32.5 3.7 35 21-57 89-126 (517)
140 PHA03008 hypothetical protein; 38.7 63 0.0014 28.1 4.7 43 187-234 163-205 (234)
141 cd01987 USP_OKCHK USP domain i 37.1 1.8E+02 0.004 22.3 7.2 23 210-232 74-96 (124)
142 PF01784 NIF3: NIF3 (NGG1p int 36.9 52 0.0011 29.6 4.3 43 188-232 56-98 (241)
143 PF06874 FBPase_2: Firmicute f 34.2 33 0.00072 35.1 2.7 43 43-114 182-224 (640)
144 COG2248 Predicted hydrolase (m 32.5 1.5E+02 0.0032 27.1 6.2 39 19-58 176-214 (304)
145 PRK11439 pphA serine/threonine 32.0 41 0.00088 29.7 2.7 29 221-257 179-207 (218)
146 PRK13600 putative ribosomal pr 29.4 2.4E+02 0.0051 20.9 6.1 24 33-56 17-40 (84)
147 KOG3818 DNA polymerase epsilon 27.5 3.4E+02 0.0074 26.9 8.1 37 19-57 282-325 (525)
148 PRK11449 putative deoxyribonuc 26.6 82 0.0018 28.7 3.8 64 154-235 98-161 (258)
149 PF02350 Epimerase_2: UDP-N-ac 26.5 78 0.0017 30.2 3.8 44 183-229 179-222 (346)
150 PRK01018 50S ribosomal protein 24.2 3.2E+02 0.007 20.7 6.2 23 34-56 21-43 (99)
151 COG3931 Predicted N-formylglut 24.1 1.7E+02 0.0036 26.3 4.9 12 103-114 101-112 (263)
152 PRK10799 metal-binding protein 22.7 1.8E+02 0.0039 26.2 5.3 44 188-234 59-102 (247)
153 PF00072 Response_reg: Respons 22.7 2.5E+02 0.0054 20.7 5.5 53 33-113 31-83 (112)
154 TIGR00486 YbgI_SA1388 dinuclea 22.4 1.6E+02 0.0035 26.6 4.8 18 214-232 84-101 (249)
155 PF05582 Peptidase_U57: YabG p 21.5 99 0.0021 28.5 3.2 49 171-232 117-166 (287)
156 PF04683 Proteasom_Rpn13: Prot 21.0 3E+02 0.0064 20.4 5.2 36 318-354 16-51 (85)
157 PF13258 DUF4049: Domain of un 20.8 1.3E+02 0.0028 27.0 3.6 16 101-116 127-142 (318)
158 cd04502 SGNH_hydrolase_like_7 20.7 3.3E+02 0.0071 22.3 6.2 10 44-53 49-58 (171)
159 TIGR02855 spore_yabG sporulati 20.5 86 0.0019 28.8 2.6 49 171-232 116-165 (283)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-61 Score=455.14 Aligned_cols=298 Identities=44% Similarity=0.750 Sum_probs=260.6
Q ss_pred CCCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhC-CCCEEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 1 ~s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~~-~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
||++|+|+|+| ++ ..+.+++++||++.......++..+.+. ++|+|||+|||+|++.+.+
T Consensus 132 wS~~f~F~t~p--~~-~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n---------------- 192 (452)
T KOG1378|consen 132 WSEIFSFKTPP--GQ-DSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSN---------------- 192 (452)
T ss_pred cccceEeECCC--Cc-cCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCCCc----------------
Confidence 89999999999 22 2479999999999887776677666554 5999999999999864310
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccc
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY 159 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~ 159 (373)
.+||.|.++++++++.+|+|++.||||....... .|..|..||.||.++..+..+.||||++|++|||+|+|+
T Consensus 193 ------~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse 265 (452)
T KOG1378|consen 193 ------WQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTE 265 (452)
T ss_pred ------cchHHHHhhhhhhhccCceEEecccccccCCCcc-cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEecc
Confidence 4899999999999999999999999999765443 689999999999988877788999999999999999999
Q ss_pred ccC--CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCC-CccchH--HHHHHHHHHHHHcCccEEEecccccee
Q 017367 160 ISY--DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSS-HYREAE--CMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 160 ~~~--~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~-~~~~~~--~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
.++ ....+|++||+++|++++|.++||+||+.|+|+|++... ++.+.+ .++..|++||.+++||++|+||.|+||
T Consensus 266 ~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YE 345 (452)
T KOG1378|consen 266 TYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYE 345 (452)
T ss_pred ccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehh
Confidence 875 346899999999999999876899999999999998764 455444 678899999999999999999999999
Q ss_pred eeeecccCcc----------CCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCccc
Q 017367 235 RSNRVFNYTL----------DPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCW 304 (373)
Q Consensus 235 r~~p~~~~~~----------~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (373)
|++|+++.++ ++.+++||++|.||+.++.+.. +
T Consensus 346 R~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~--------------------------~----------- 388 (452)
T KOG1378|consen 346 RFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPF--------------------------S----------- 388 (452)
T ss_pred ccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcc--------------------------c-----------
Confidence 9999999877 7889999999999998875431 0
Q ss_pred CCCCCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeCCCCCCCC
Q 017367 305 DRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPFH 361 (373)
Q Consensus 305 ~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~~~~~~~~ 361 (373)
.++|+||+||+.+|||++|++.|+||+.|+|+++.|.++++.|+|||+|+...|...
T Consensus 389 ~~~p~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~ 445 (452)
T KOG1378|consen 389 SPQPEWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVG 445 (452)
T ss_pred CCCCcccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccc
Confidence 368999999999999999999999999999999988889999999999998776643
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=1.1e-58 Score=449.76 Aligned_cols=294 Identities=47% Similarity=0.866 Sum_probs=253.1
Q ss_pred CCCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCC
Q 017367 1 MSDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 80 (373)
Q Consensus 1 ~s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~ 80 (373)
+|++|+|+|+|.. .++||+++||+|.......+++.+.+.+|||||++||++|++
T Consensus 125 ~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~GDl~y~~--------------------- 179 (427)
T PLN02533 125 STQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILPGDLSYAN--------------------- 179 (427)
T ss_pred CccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEcCcccccc---------------------
Confidence 3688999998853 379999999999766566788999889999999999999853
Q ss_pred cccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCC--CCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcc
Q 017367 81 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQA--GNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGA 158 (373)
Q Consensus 81 ~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt 158 (373)
.|+.+|+.|.+.++++.+.+|+|+++||||..... ....+..|.++|.||..+.+...+.||||++|++|||+||+
T Consensus 180 --~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds 257 (427)
T PLN02533 180 --FYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGS 257 (427)
T ss_pred --chHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeC
Confidence 13568999999999998899999999999986432 23467788899999987666667899999999999999999
Q ss_pred cccCCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc--hHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 159 YISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE--AECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 159 ~~~~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~--~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
+.++....+|++||+++|++++++++||+||++|+|+|++...+... ...+++.|++||.+++|+++|+||+|.|||+
T Consensus 258 ~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~ 337 (427)
T PLN02533 258 YTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERF 337 (427)
T ss_pred CccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceeccccc
Confidence 98877889999999999999887788999999999999876443222 2346789999999999999999999999999
Q ss_pred eecccCccCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccccccC
Q 017367 237 NRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRES 316 (373)
Q Consensus 237 ~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (373)
+|++++++++.|++||++|+||+.++.... + ..++|+|++||+.
T Consensus 338 ~p~~~~~~~~~gpvyiv~G~gG~~e~~~~~--------------------------~----------~~~~~~~s~~r~~ 381 (427)
T PLN02533 338 DRVYQGKTDKCGPVYITIGDGGNREGLATK--------------------------Y----------IDPKPDISLFREA 381 (427)
T ss_pred ccccCCccCCCCCEEEEeCCCccccccccc--------------------------c----------CCCCCCceeEEec
Confidence 999999999999999999999998764310 0 1467889999999
Q ss_pred CceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeCCCC
Q 017367 317 SFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDK 357 (373)
Q Consensus 317 ~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~~~~ 357 (373)
+|||++|+|.|.|||.|+|++++|+++.|.|+|||.|...+
T Consensus 382 ~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~ 422 (427)
T PLN02533 382 SFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE 422 (427)
T ss_pred cCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC
Confidence 99999999999999999999998887789999999998653
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=1.5e-48 Score=365.03 Aligned_cols=276 Identities=44% Similarity=0.759 Sum_probs=219.4
Q ss_pred CCeEEEEEecCCCC-CChHHHHHHHHh--CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH
Q 017367 18 YPKRIAIVGDLGLT-YNTTCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 94 (373)
Q Consensus 18 ~~~r~~~igD~h~~-~~~~~~l~~l~~--~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 94 (373)
.++||+++||+|.. .....++++|.+ .+|||||++||++|... . ..+.+|+.|.+.
T Consensus 3 ~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~-----~----------------~~~~~~~~~~~~ 61 (294)
T cd00839 3 TPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADG-----Y----------------NNGSRWDTFMRQ 61 (294)
T ss_pred CcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcC-----C----------------ccchhHHHHHHH
Confidence 37999999999973 456778888887 69999999999998532 1 012578889999
Q ss_pred HhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC---CCChHHHHH
Q 017367 95 MQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY---DKSGHQYKW 171 (373)
Q Consensus 95 l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~---~~~~~Q~~W 171 (373)
++++...+|+++++||||............+..++.++........+.||+|++|+++||+|||+... ....+|++|
T Consensus 62 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 62 IEPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred HHHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99988889999999999987543222111111123333333334567899999999999999998765 568999999
Q ss_pred HHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc--chHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCc------
Q 017367 172 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT------ 243 (373)
Q Consensus 172 L~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~------ 243 (373)
|+++|+++.+.+.+|+||++|+|+++....... .....++.|.++|++++|+++|+||+|.|+|++|+++.+
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~~~~~ 221 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGDCN 221 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEeccccc
Confidence 999999987666789999999999987543322 235678899999999999999999999999999998754
Q ss_pred --cCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccccccCCceeE
Q 017367 244 --LDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHG 321 (373)
Q Consensus 244 --~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~ 321 (373)
.+++|++||++|+||+.++.... ..+.++|++++...+||+
T Consensus 222 ~~~~~~g~~yiv~G~~G~~~~~~~~-------------------------------------~~~~~~~~~~~~~~~g~~ 264 (294)
T cd00839 222 PYSNPKGPVHIVIGAGGNDEGLDPF-------------------------------------SAPPPAWSAFRESDYGFG 264 (294)
T ss_pred cccCCCccEEEEECCCccccCcCcc-------------------------------------cCCCCCceEEEeccCCEE
Confidence 36789999999999998653210 012357999999999999
Q ss_pred EEEEecCCeEEEEEEEecCCCceeeEEEEEEe
Q 017367 322 ILEVKNETWALWTWHRNQDSNNKVGDQIYIVR 353 (373)
Q Consensus 322 ~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k 353 (373)
+|+|.|+|+|.++|+++.+| +|+|+|+|+|
T Consensus 265 ~~~~~~~t~l~~~~~~~~~g--~v~D~f~i~k 294 (294)
T cd00839 265 RLTVHNSTHLHFEWIRNDDG--VVIDSFWIIK 294 (294)
T ss_pred EEEEEecCeEEEEEEECCCC--eEEEEEEEeC
Confidence 99999999999999998877 9999999987
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=4.1e-35 Score=276.13 Aligned_cols=262 Identities=19% Similarity=0.302 Sum_probs=190.6
Q ss_pred CeEEEEEecCCCCCChHHHHH----HHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHH-HH
Q 017367 19 PKRIAIVGDLGLTYNTTCTIN----HMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY-WG 92 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~----~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~-~~ 92 (373)
.+||+++||+|.+...+..++ ++. +.++||||.+||++ .+ |.. ....++|.. |.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~-----Gv~--------------sv~Dp~f~~~FE 85 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PG-----GVD--------------GLNDPKWKHCFE 85 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cC-----CCC--------------CccchhHHhhHh
Confidence 599999999997655544433 332 35899999999998 33 321 111344544 55
Q ss_pred HHHhhhh--cCCCeEEecCCCCcCCCCCCcc--hh------------------hhhcccCCCCCCCCCCCcceEEE----
Q 017367 93 RFMQNLV--SKVPIMVVEGNHEIEAQAGNQT--FV------------------AYSSRFAFPSEESGSLSSFYYSF---- 146 (373)
Q Consensus 93 ~~l~~l~--~~~P~~~v~GNHD~~~~~~~~~--~~------------------~~~~~~~~p~~~~~~~~~~~ys~---- 146 (373)
++..... ..+||++|+||||+.++...+. +. ....||.||. .||.+
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f 157 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHF 157 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeee
Confidence 6665543 5799999999999976544321 11 1135787775 57754
Q ss_pred Ee-------------CCEEEEEEcccccC------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchH
Q 017367 147 NA-------------GGIHFIMLGAYISY------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAE 207 (373)
Q Consensus 147 ~~-------------g~~~fi~ldt~~~~------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~ 207 (373)
.. ..+.||++||.... ....+|++||+++|+.+. +..+|+||++|||+|+++.. ....
T Consensus 158 ~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a~-k~a~WkIVvGHhPIySsG~h--g~~~ 234 (394)
T PTZ00422 158 TDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYAP-KIADYIIVVGDKPIYSSGSS--KGDS 234 (394)
T ss_pred ecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhhc-cCCCeEEEEecCceeecCCC--CCCH
Confidence 22 12899999996321 235789999999997553 45689999999999998642 3345
Q ss_pred HHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCC
Q 017367 208 CMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGG 287 (373)
Q Consensus 208 ~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (373)
+++..|++||++|+|+++|+||.|++|+.. .+|+.||++|+||...+...
T Consensus 235 ~L~~~L~PLL~ky~VdlYisGHDH~lq~i~--------~~gt~yIvSGaGs~~~~~~~---------------------- 284 (394)
T PTZ00422 235 YLSYYLLPLLKDAQVDLYISGYDRNMEVLT--------DEGTAHINCGSGGNSGRKSI---------------------- 284 (394)
T ss_pred HHHHHHHHHHHHcCcCEEEEccccceEEec--------CCCceEEEeCccccccCCCC----------------------
Confidence 688899999999999999999999999973 56899999999988543110
Q ss_pred ccccccccCCCCCCcccCCCCCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeCCCCCCCCC
Q 017367 288 FCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQPDKCPFHG 362 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~~~~~~~~~ 362 (373)
...+|++|....+||..+++ +++.|+++|+...+| ++++++++.|-.-+-.+.|
T Consensus 285 ------------------~~~~~s~F~~~~~GF~~~~l-~~~~l~~~fid~~~G--kvL~~~~~~~~~~~~~~~~ 338 (394)
T PTZ00422 285 ------------------MKNSKSLFYSEDIGFCIHEL-NAEGMVTKFVSGNTG--EVLYTHKQPLKKRKLRFQG 338 (394)
T ss_pred ------------------CCCCCcceecCCCCEEEEEE-ecCEEEEEEEeCCCC--cEEEEeeecccchhhhhhc
Confidence 12356788888899999998 888999999975566 9999999977665544444
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=100.00 E-value=8.7e-33 Score=256.34 Aligned_cols=244 Identities=24% Similarity=0.367 Sum_probs=171.8
Q ss_pred eEEEEEecCCCC-CC-hH---HHHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHH-HHHH
Q 017367 20 KRIAIVGDLGLT-YN-TT---CTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW-DYWG 92 (373)
Q Consensus 20 ~r~~~igD~h~~-~~-~~---~~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~-~~~~ 92 (373)
++|+++||++.. .. .. ..|.++. +.+|||||++||++|+++.. ..+...| +.|.
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~-------------------~~~~~~~~~~~~ 61 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVG-------------------SVDDPRFETTFE 61 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCC-------------------CCcchHHHHHHH
Confidence 489999999975 22 22 2333333 36999999999999864321 0111233 3355
Q ss_pred HHHhhhhcCCCeEEecCCCCcCCCCCCc-chhh--hhcccCCCCCCCCCCCcceEEEEeC------CEEEEEEcccccC-
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIEAQAGNQ-TFVA--YSSRFAFPSEESGSLSSFYYSFNAG------GIHFIMLGAYISY- 162 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~~~~~~~-~~~~--~~~~~~~p~~~~~~~~~~~ys~~~g------~~~fi~ldt~~~~- 162 (373)
+.++.+..++|+++++||||+....... .+.. +..+|.+ ...||+|+++ +++||+|||....
T Consensus 62 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~--------~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~ 133 (277)
T cd07378 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTM--------PAYYYRVSFPFPSSDTTVEFIMIDTVPLCG 133 (277)
T ss_pred HHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccC--------cchheEEEeecCCCCCEEEEEEEeChhHcC
Confidence 5555554689999999999987432111 1111 1223333 3478999988 7999999997532
Q ss_pred --------------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEec
Q 017367 163 --------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNG 228 (373)
Q Consensus 163 --------------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~G 228 (373)
....+|++||+++|+++.+ +|+||++|+|+++..... .....++.|.+++++++|+++|+|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~~---~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~G 208 (277)
T cd07378 134 NSDDIASPYGPPNGKLAEEQLAWLEKTLAASTA---DWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSG 208 (277)
T ss_pred ccccccccccCcchhhHHHHHHHHHHHHHhcCC---CeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeC
Confidence 2368999999999998753 689999999998764322 224568899999999999999999
Q ss_pred cccceeeeeecccCccCCCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCC
Q 017367 229 HVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQP 308 (373)
Q Consensus 229 H~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (373)
|+|.+++..+ ...++.||++|+||...+.... . ....|
T Consensus 209 H~H~~~~~~~------~~~~~~~i~~G~~~~~~~~~~~---------~---------------------------~~~~~ 246 (277)
T cd07378 209 HDHNLQHIKD------DGSGTSFVVSGAGSKARPSVKH---------I---------------------------DKVPQ 246 (277)
T ss_pred Ccccceeeec------CCCCcEEEEeCCCcccCCCCCc---------c---------------------------Ccccc
Confidence 9999998853 2359999999998886532210 0 01234
Q ss_pred CccccccCCceeEEEEEecCCeEEEEEEEe
Q 017367 309 DYSAFRESSFGHGILEVKNETWALWTWHRN 338 (373)
Q Consensus 309 ~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~ 338 (373)
+|.+++...+||++++| ..+.|.++|+..
T Consensus 247 ~~~~~~~~~~Gy~~i~v-~~~~l~~~~~~~ 275 (277)
T cd07378 247 FFSGFTSSGGGFAYLEL-TKEELTVRFYDA 275 (277)
T ss_pred cccccccCCCCEEEEEE-ecCEEEEEEECC
Confidence 68888889999999999 566899999853
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.97 E-value=4.2e-30 Score=236.42 Aligned_cols=204 Identities=23% Similarity=0.366 Sum_probs=147.0
Q ss_pred CeEEEEEecCCCCCC-----------------hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 19 PKRIAIVGDLGLTYN-----------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 19 ~~r~~~igD~h~~~~-----------------~~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
+++|+++||+|.+.. ..++++.+.+. +||+||++||+++. +..
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~------~~~------------ 65 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNA------MPG------------ 65 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCC------Ccc------------
Confidence 799999999997731 13445666665 99999999999953 221
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccc
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY 159 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~ 159 (373)
.+..+.+++.+.+.++.+...+|+++++||||+........+..|...| +..||+++.++++||+|||.
T Consensus 66 -~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~ 134 (262)
T cd07395 66 -DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQ 134 (262)
T ss_pred -hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHh----------CCcceEEEECCEEEEEeccc
Confidence 1111245677777777776689999999999986433222333444333 34589999999999999996
Q ss_pred ccC------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCc----cchHHHHHHHHHHHHHcCccEEEecc
Q 017367 160 ISY------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY----REAECMRVEMEALLYSYGVDIVFNGH 229 (373)
Q Consensus 160 ~~~------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~----~~~~~~~~~l~~ll~~~~v~lvl~GH 229 (373)
... ....+|++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||
T Consensus 135 ~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH 214 (262)
T cd07395 135 LFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGH 214 (262)
T ss_pred cccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECc
Confidence 432 23579999999999998634455799999999975432211 12245678999999999999999999
Q ss_pred ccceeeeeecccCccCCCCCEEEEeCCCCC
Q 017367 230 VHAYERSNRVFNYTLDPCGPVHITIGDGGN 259 (373)
Q Consensus 230 ~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~ 259 (373)
+|...+.. -.|+.+++++++|.
T Consensus 215 ~H~~~~~~--------~~g~~~~~~~~~~~ 236 (262)
T cd07395 215 YHRNAGGR--------YGGLEMVVTSAIGA 236 (262)
T ss_pred cccCCceE--------ECCEEEEEcCceec
Confidence 99877642 34788888877765
No 7
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=4.5e-26 Score=198.93 Aligned_cols=255 Identities=20% Similarity=0.257 Sum_probs=165.7
Q ss_pred CCeEEEEEecCCCCC--ChHH---HHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHH
Q 017367 18 YPKRIAIVGDLGLTY--NTTC---TINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 91 (373)
Q Consensus 18 ~~~r~~~igD~h~~~--~~~~---~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~ 91 (373)
..++|+++||++... +... .+..|. +.++||||-+||.+|.++..+. .|+++++ .|
T Consensus 42 gslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~-----------~Dp~Fq~-------sF 103 (336)
T KOG2679|consen 42 GSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSE-----------NDPRFQD-------SF 103 (336)
T ss_pred CceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCC-----------CChhHHh-------hh
Confidence 369999999999543 3222 334443 3589999999999997543211 1122222 24
Q ss_pred HHHHhhhhcCCCeEEecCCCCcCCCCCCcc---hhhhhcccCCCCCCCCCCCcceEE----EE--eCCEEEEEEcccccC
Q 017367 92 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQT---FVAYSSRFAFPSEESGSLSSFYYS----FN--AGGIHFIMLGAYISY 162 (373)
Q Consensus 92 ~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~---~~~~~~~~~~p~~~~~~~~~~~ys----~~--~g~~~fi~ldt~~~~ 162 (373)
.++...-....|||.|+||||+.++...+. +.....||..|.. ||. .+ .-++.+.++++....
T Consensus 104 ~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~~ 175 (336)
T KOG2679|consen 104 ENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTLC 175 (336)
T ss_pred hhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccH--------Hhhcceeeeeeccccccchhhheecc
Confidence 444443334679999999999988765442 4455567755531 221 11 113344444443211
Q ss_pred C--------------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEec
Q 017367 163 D--------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNG 228 (373)
Q Consensus 163 ~--------------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~G 228 (373)
. ....++.||+..|++. .++|+||.+|||+.+.+ +.+.+.++.+.|.++|+.++|+++++|
T Consensus 176 ~~~~ydw~~v~PR~~~~~~~l~~le~~L~~S---~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nG 250 (336)
T KOG2679|consen 176 TDDVYDWRGVLPRVKYLRALLSWLEVALKAS---RAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYING 250 (336)
T ss_pred cccccccccCChHHHHHHHHHHHHHHHHHHh---hcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEec
Confidence 0 1367899999999984 56799999999998754 456778999999999999999999999
Q ss_pred cccceeeeeecccCccC-CCCCEEEEeCCCCCccccccccCCCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCC
Q 017367 229 HVHAYERSNRVFNYTLD-PCGPVHITIGDGGNLEKMSITHADEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQ 307 (373)
Q Consensus 229 H~H~~~r~~p~~~~~~~-~~g~~yi~~G~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
|.|+.|... . .+++-|+++|+|...-.... + | ..-.
T Consensus 251 HDHcLQhis-------~~e~~iqf~tSGagSkaw~g~~-~------------------------~-----------~~~~ 287 (336)
T KOG2679|consen 251 HDHCLQHIS-------SPESGIQFVTSGAGSKAWRGTD-H------------------------N-----------PEVN 287 (336)
T ss_pred chhhhhhcc-------CCCCCeeEEeeCCcccccCCCc-c------------------------C-----------CccC
Confidence 999999874 3 35666777777654321100 0 0 0112
Q ss_pred CCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEEE
Q 017367 308 PDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQIY 350 (373)
Q Consensus 308 ~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~ 350 (373)
|+.-.|.-..-||.-+++ ....+++.|+... ++++..-.
T Consensus 288 p~~lkF~YdgqGfmsv~i-s~~e~~vvfyD~~---G~~Lhk~~ 326 (336)
T KOG2679|consen 288 PKELKFYYDGQGFMSVEI-SHSEARVVFYDVS---GKVLHKWS 326 (336)
T ss_pred hhheEEeeCCCceEEEEE-ecceeEEEEEecc---CceEEEee
Confidence 333455444459999999 7788999998643 37887744
No 8
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.94 E-value=2.9e-26 Score=211.26 Aligned_cols=197 Identities=23% Similarity=0.308 Sum_probs=137.0
Q ss_pred eEEEEEecCCCCCC--------------hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 20 KRIAIVGDLGLTYN--------------TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 20 ~r~~~igD~h~~~~--------------~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
|||+++||+|.... ..++++.+++.+||+||++||+++. +.. ..+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~------~~~---------------~~~ 59 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG------DNA---------------RAE 59 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC------CCc---------------hHH
Confidence 69999999996542 1345677777789999999999952 210 012
Q ss_pred HHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccccc----
Q 017367 86 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS---- 161 (373)
Q Consensus 86 ~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~---- 161 (373)
..|+.+.+.++.+ ++|+++++||||...... .+.. .... ...+..||+|+.++++||+||+...
T Consensus 60 ~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~-----~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~~ 127 (267)
T cd07396 60 EALDAVLAILDRL--KGPVHHVLGNHDLYNPSR-----EYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISALG 127 (267)
T ss_pred HHHHHHHHHHHhc--CCCEEEecCccccccccH-----hhhh-cccc----cCCCCceEEEecCCcEEEEEeCCcccccc
Confidence 4566666666666 799999999999863221 1110 0000 1245579999999999999998521
Q ss_pred ------------------------------CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHH
Q 017367 162 ------------------------------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV 211 (373)
Q Consensus 162 ------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~ 211 (373)
.....+|++||+++|+++..... .+||++|+|++...... ......++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~~-~viV~~Hhp~~~~~~~~-~~~~~~~~ 205 (267)
T cd07396 128 RPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANGE-KVIIFSHFPLHPESTSP-HGLLWNHE 205 (267)
T ss_pred CCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcCC-eEEEEEeccCCCCCCCc-cccccCHH
Confidence 12468999999999998753333 48999999987654211 11112257
Q ss_pred HHHHHHHHc-CccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 017367 212 EMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 259 (373)
Q Consensus 212 ~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~ 259 (373)
.+.++++++ +|+++|+||+|.++.. ..+|+.|+++|+-..
T Consensus 206 ~~~~ll~~~~~V~~v~~GH~H~~~~~--------~~~gi~~~~~~a~~~ 246 (267)
T cd07396 206 EVLSILRAYGCVKACISGHDHEGGYA--------QRHGIHFLTLEGMVE 246 (267)
T ss_pred HHHHHHHhCCCEEEEEcCCcCCCCcc--------ccCCeeEEEechhhc
Confidence 788999996 8999999999998754 357898988886443
No 9
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.94 E-value=1e-25 Score=204.57 Aligned_cols=192 Identities=22% Similarity=0.320 Sum_probs=136.0
Q ss_pred EEEEEecCCCCCC-------------hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 21 RIAIVGDLGLTYN-------------TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 21 r~~~igD~h~~~~-------------~~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
||+++||+|.+.. ..++++.+++. +||+||++||+++. +. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~------~~------------------~ 56 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD------GS------------------P 56 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC------CC------------------H
Confidence 6999999998743 13456666665 89999999999952 22 2
Q ss_pred HHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC---
Q 017367 86 PRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY--- 162 (373)
Q Consensus 86 ~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~--- 162 (373)
.+++.+.+.++.+ ++|+++|+||||... . +.+.|..... ..+..+|+|+.++++||+||+....
T Consensus 57 ~~~~~~~~~l~~~--~~p~~~v~GNHD~~~-----~---~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~ 123 (240)
T cd07402 57 ESYERLRELLAAL--PIPVYLLPGNHDDRA-----A---MRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHG 123 (240)
T ss_pred HHHHHHHHHHhhc--CCCEEEeCCCCCCHH-----H---HHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcC
Confidence 3456666777766 899999999999741 1 2222211100 1345678999999999999986532
Q ss_pred -CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHHc-CccEEEeccccceeeeeec
Q 017367 163 -DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRV 239 (373)
Q Consensus 163 -~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~ 239 (373)
....+|++||++.|++.. .. .+|+++|+|++......... ....++++.+++.++ +++++|+||+|......
T Consensus 124 ~~~~~~ql~wL~~~L~~~~--~~-~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~-- 198 (240)
T cd07402 124 GELCAAQLDWLEAALAEAP--DK-PTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS-- 198 (240)
T ss_pred CEECHHHHHHHHHHHHhCC--CC-CEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--
Confidence 246899999999999875 22 36778888876543211111 112367899999999 99999999999976553
Q ss_pred ccCccCCCCCEEEEeCCCCCc
Q 017367 240 FNYTLDPCGPVHITIGDGGNL 260 (373)
Q Consensus 240 ~~~~~~~~g~~yi~~G~gG~~ 260 (373)
.+|+.++++|+.|..
T Consensus 199 ------~~g~~~~~~gs~~~~ 213 (240)
T cd07402 199 ------WGGIPLLTAPSTCHQ 213 (240)
T ss_pred ------ECCEEEEEcCcceee
Confidence 478999999987774
No 10
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.93 E-value=1.8e-24 Score=200.22 Aligned_cols=192 Identities=19% Similarity=0.250 Sum_probs=126.1
Q ss_pred CCeEEEEEecCCCCC---------C----hHHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcc
Q 017367 18 YPKRIAIVGDLGLTY---------N----TTCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 82 (373)
Q Consensus 18 ~~~r~~~igD~h~~~---------~----~~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~ 82 (373)
.++||++++|+|+.. + ..++++.+++. +||+||++||++. ++.
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~------~~~---------------- 70 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ------DHS---------------- 70 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC------CCC----------------
Confidence 369999999999632 1 13456666553 6999999999994 222
Q ss_pred cchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC
Q 017367 83 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY 162 (373)
Q Consensus 83 ~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~ 162 (373)
...++.+.+.++.+ ++|+++++||||... .+..+.....+ ...++.+..++++||+||+....
T Consensus 71 --~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~-----~~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g 133 (275)
T PRK11148 71 --SEAYQHFAEGIAPL--RKPCVWLPGNHDFQP-----AMYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFG 133 (275)
T ss_pred --HHHHHHHHHHHhhc--CCcEEEeCCCCCChH-----HHHHHHhhcCC--------CccceEEecCCEEEEEecCCCCC
Confidence 13455666667766 789999999999842 11222111111 11233444567999999996432
Q ss_pred ----CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHHc-CccEEEeccccceeee
Q 017367 163 ----DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSY-GVDIVFNGHVHAYERS 236 (373)
Q Consensus 163 ----~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~ 236 (373)
..+.+|++||+++|+++.. .+.+|+++|+|+.... .+... .....++|.++++++ +|+++|+||+|.....
T Consensus 134 ~~~G~l~~~ql~wL~~~L~~~~~--~~~vv~~hH~P~~~~~-~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~ 210 (275)
T PRK11148 134 VPHGELSEYQLEWLERKLADAPE--RHTLVLLHHHPLPAGC-AWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL 210 (275)
T ss_pred CcCCEeCHHHHHHHHHHHhhCCC--CCeEEEEcCCCCCCCc-chhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc
Confidence 3468999999999998753 3335666666764422 11110 112356899999998 8999999999985443
Q ss_pred eecccCccCCCCCEEEEeCCCCC
Q 017367 237 NRVFNYTLDPCGPVHITIGDGGN 259 (373)
Q Consensus 237 ~p~~~~~~~~~g~~yi~~G~gG~ 259 (373)
..+|+.++++++.+.
T Consensus 211 --------~~~gi~~~~~ps~~~ 225 (275)
T PRK11148 211 --------DWNGRRLLATPSTCV 225 (275)
T ss_pred --------eECCEEEEEcCCCcC
Confidence 246888877766554
No 11
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.92 E-value=1.6e-23 Score=191.51 Aligned_cols=193 Identities=21% Similarity=0.272 Sum_probs=126.3
Q ss_pred EEEEecCCCCCCh--------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 22 IAIVGDLGLTYNT--------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 22 ~~~igD~h~~~~~--------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
|++++|+|.+... ..+++.+++.+||+||++||++.... ..+. ....++.+|+.|.+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~--~~~~-------------~~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKT--GNKL-------------PSYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccc--cCCC-------------cccccHHHHHHHHH
Confidence 7899999986431 12355666789999999999994211 1111 01223557877777
Q ss_pred HHhhhhc--CCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEE--EeCCEEEEEEccccc--------
Q 017367 94 FMQNLVS--KVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSF--NAGGIHFIMLGAYIS-------- 161 (373)
Q Consensus 94 ~l~~l~~--~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~--~~g~~~fi~ldt~~~-------- 161 (373)
.+..+.. ..|++.++||||............|..++.... .....+|.+ ..++++||+|||...
T Consensus 67 ~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~~----~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~ 142 (256)
T cd07401 67 ILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSATG----RDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFN 142 (256)
T ss_pred HHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhheec----CCCccceEEEecCCCEEEEEEcCccCCCCCCCCc
Confidence 7766532 589999999999964332222222222221100 011223333 348999999999742
Q ss_pred --CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeec
Q 017367 162 --YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 239 (373)
Q Consensus 162 --~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~ 239 (373)
.....+|++||++.|+++.. .+++||++|+|+....... . . ....+.++|++++|+++||||+|.+++..|+
T Consensus 143 ~~g~l~~~ql~wL~~~L~~~~~--~~~~IV~~HhP~~~~~~~~-~--~-~~~~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 143 FFGSLDKKLLDRLEKELEKSTN--SNYTIWFGHYPTSTIISPS-A--K-SSSKFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred eeccCCHHHHHHHHHHHHhccc--CCeEEEEEcccchhccCCC-c--c-hhHHHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 23468999999999998653 3468999999986532211 1 1 1223899999999999999999999996664
No 12
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.86 E-value=1.1e-20 Score=176.77 Aligned_cols=183 Identities=20% Similarity=0.286 Sum_probs=120.6
Q ss_pred HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH-HHHHHHHHHhhhhcCCCeEEecCCC
Q 017367 35 TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP-RWDYWGRFMQNLVSKVPIMVVEGNH 111 (373)
Q Consensus 35 ~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~-~~~~~~~~l~~l~~~~P~~~v~GNH 111 (373)
+++++.+.+. +|||||++||++..+.+.. ..+.... .+..+.+.++.....+|+++++|||
T Consensus 56 ~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~----------------~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNH 119 (296)
T cd00842 56 ESALEAIKKNHPKPDFILWTGDLVRHDVDEQ----------------TPETLVLISISNLTSLLKKAFPDTPVYPALGNH 119 (296)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCCCCchhh----------------chhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCC
Confidence 4567777766 9999999999996532210 0000000 2444566666666789999999999
Q ss_pred CcCCCCC-------CcchhhhhcccC--CCCCC-CCCCCcceEEEE-eCCEEEEEEcccccC-----------CCChHHH
Q 017367 112 EIEAQAG-------NQTFVAYSSRFA--FPSEE-SGSLSSFYYSFN-AGGIHFIMLGAYISY-----------DKSGHQY 169 (373)
Q Consensus 112 D~~~~~~-------~~~~~~~~~~~~--~p~~~-~~~~~~~~ys~~-~g~~~fi~ldt~~~~-----------~~~~~Q~ 169 (373)
|...... ...+..+...|. ++... .......||++. .+++++|+|||.... ....+|+
T Consensus 120 D~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql 199 (296)
T cd00842 120 DSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQL 199 (296)
T ss_pred CCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHH
Confidence 9875321 112222222222 22111 112346789988 889999999996432 1247899
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcC--ccEEEeccccceeeee
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAYERSN 237 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~~~r~~ 237 (373)
+||+++|+++++.+.+ ++|++|+|+....... .....++|.+++++|. |.++|+||+|..+...
T Consensus 200 ~WL~~~L~~a~~~~~~-v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 200 QWLEDELQEAEQAGEK-VWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred HHHHHHHHHHHHCCCe-EEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 9999999998644433 7778899987643221 1345688999999996 7889999999877653
No 13
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.86 E-value=7.9e-21 Score=169.19 Aligned_cols=149 Identities=19% Similarity=0.267 Sum_probs=106.7
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHH
Q 017367 20 KRIAIVGDLGLTYNT---------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 90 (373)
Q Consensus 20 ~r~~~igD~h~~~~~---------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~ 90 (373)
|||++++|+|..... ..+++.+.+.+||+||++||++.. +. ...+|..
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~------~~-----------------~~~~~~~ 57 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDD------GD-----------------NDAEWEA 57 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCC------CC-----------------CHHHHHH
Confidence 689999999975431 123444455789999999999952 11 0246778
Q ss_pred HHHHHhhhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHH
Q 017367 91 WGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 169 (373)
Q Consensus 91 ~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~ 169 (373)
+.+.++.+. ..+|+++++||||. ++.+|+ ....+|+
T Consensus 58 ~~~~~~~l~~~~~p~~~~~GNHD~---------------------------------------~~~ld~----~~~~~ql 94 (214)
T cd07399 58 ADKAFARLDKAGIPYSVLAGNHDL---------------------------------------VLALEF----GPRDEVL 94 (214)
T ss_pred HHHHHHHHHHcCCcEEEECCCCcc---------------------------------------hhhCCC----CCCHHHH
Confidence 888888885 67999999999992 122222 2358999
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-----hHHHHHHHHHHHHHc-CccEEEeccccceeeee
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-----AECMRVEMEALLYSY-GVDIVFNGHVHAYERSN 237 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-----~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~ 237 (373)
+||++.|++.+. . ++|+++|+|++......... ....++.|.++++++ +|+++|+||.|.+.+..
T Consensus 95 ~WL~~~L~~~~~--~-~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 95 QWANEVLKKHPD--R-PAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred HHHHHHHHHCCC--C-CEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 999999998642 2 37888899987654321111 123346788999999 79999999999987764
No 14
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.80 E-value=2.4e-18 Score=155.17 Aligned_cols=191 Identities=17% Similarity=0.204 Sum_probs=117.6
Q ss_pred EEEEecCCCCC--------C---hHHHHHHHHhC------CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 22 IAIVGDLGLTY--------N---TTCTINHMSSN------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 22 ~~~igD~h~~~--------~---~~~~l~~l~~~------~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
|.+++|+|... - ..+.++++.+. +||+||++||++.. +. .
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~------~~-----------------~ 57 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA------MK-----------------L 57 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC------CC-----------------h
Confidence 46899999772 1 13455555543 99999999999842 11 0
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccccc---
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS--- 161 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~--- 161 (373)
.......+.++.+ ..|+++|+||||++.. ....+.+.+... +..-....++.++++.|++++....
T Consensus 58 -~~~~~~l~~l~~l--~~~v~~V~GNHD~~~~----~~~~~~~~l~~~----~~~~~~n~~~~~~~i~i~G~~~~~~~~~ 126 (232)
T cd07393 58 -EEAKLDLAWIDAL--PGTKVLLKGNHDYWWG----SASKLRKALEES----RLALLFNNAYIDDDVAICGTRGWDNPGN 126 (232)
T ss_pred -HHHHHHHHHHHhC--CCCeEEEeCCccccCC----CHHHHHHHHHhc----CeEEeccCcEEECCEEEEEEEeeCCCCC
Confidence 1122233344444 4589999999998421 112222211100 0000012456678899999863211
Q ss_pred -C-------------CCChHHHHHHHHHHhhccCCC-CCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEE
Q 017367 162 -Y-------------DKSGHQYKWLEKDLANVDRSV-TPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 226 (373)
Q Consensus 162 -~-------------~~~~~Q~~WL~~~L~~~~~~~-~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl 226 (373)
. ....+|++||++.|+++.... ..++|+++|+|++..... .+.+.+++++++++++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl 198 (232)
T cd07393 127 PWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICV 198 (232)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEE
Confidence 0 013568999999999875322 235888889888664321 24577888999999999
Q ss_pred eccccceeeeeecccCccCCCCCEEEEeCCC
Q 017367 227 NGHVHAYERSNRVFNYTLDPCGPVHITIGDG 257 (373)
Q Consensus 227 ~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~g 257 (373)
+||+|..++..|+.. ..+|+.|.++.++
T Consensus 199 ~GH~H~~~~~~~~~~---~~~gi~~~~~~~~ 226 (232)
T cd07393 199 YGHLHGVGRDRAING---ERGGIRYQLVSAD 226 (232)
T ss_pred ECCCCCCcccccccc---eECCEEEEEEcch
Confidence 999999988766532 3467878776654
No 15
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.78 E-value=8.6e-18 Score=153.10 Aligned_cols=171 Identities=19% Similarity=0.253 Sum_probs=107.7
Q ss_pred HHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCC
Q 017367 37 TINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEA 115 (373)
Q Consensus 37 ~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~ 115 (373)
....+.+ .+||+||++||++.. |... ..+.+..+++.|.+++..+...+|++.|+||||+..
T Consensus 36 ~~~~~~~~l~PD~vv~lGDL~d~------G~~~-----------~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~ 98 (257)
T cd08163 36 NWRYMQKQLKPDSTIFLGDLFDG------GRDW-----------ADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGF 98 (257)
T ss_pred HHHHHHHhcCCCEEEEecccccC------CeeC-----------cHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCC
Confidence 3444443 589999999999942 3210 011222233444555544433589999999999854
Q ss_pred CCCC--cchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC-----CCChHHHHHHHHHHhhccCCCCCeEE
Q 017367 116 QAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY-----DKSGHQYKWLEKDLANVDRSVTPWLV 188 (373)
Q Consensus 116 ~~~~--~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~iI 188 (373)
.... .....|.+.|. ..+++++.++++||+||+.... ....+|++||++.|+..... .| +|
T Consensus 99 ~~~~~~~~~~rf~~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~~-~p-~I 166 (257)
T cd08163 99 GNGVVLPVRQRFEKYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVKS-KP-RI 166 (257)
T ss_pred CCCCCHHHHHHHHHHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCCC-Cc-EE
Confidence 3211 12344555552 2468999999999999996321 24568999999999876432 33 78
Q ss_pred EEeCCCCcCCCCCCcc---c---------hH----HH-HHHHHHHHHHcCccEEEeccccceeee
Q 017367 189 ATWHPPWYSSYSSHYR---E---------AE----CM-RVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 189 v~~H~P~~~~~~~~~~---~---------~~----~~-~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
+++|+|+|.......+ + .. .+ .+.-..||.+.++.+||+||+|.|=..
T Consensus 167 Ll~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 167 LLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred EEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 9999998854321110 0 00 01 234456777779999999999987554
No 16
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.78 E-value=8.9e-18 Score=146.33 Aligned_cols=167 Identities=18% Similarity=0.196 Sum_probs=102.8
Q ss_pred EEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhcC
Q 017367 22 IAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSK 101 (373)
Q Consensus 22 ~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~ 101 (373)
|+++||+|........ ..+.+.++|+||++||++.. +. ......+ +.++.+ +
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~------~~------------------~~~~~~~-~~l~~~--~ 52 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNF------GG------------------KEAAVEI-NLLLAI--G 52 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCc------CC------------------HHHHHHH-HHHHhc--C
Confidence 5799999986543322 44556789999999999942 22 1111222 444444 7
Q ss_pred CCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccccc------CCCChHHHHHHHHH
Q 017367 102 VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS------YDKSGHQYKWLEKD 175 (373)
Q Consensus 102 ~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~------~~~~~~Q~~WL~~~ 175 (373)
+|+++++||||.... ......... .. ....+.+++++|+++++... .....+|++|+ +.
T Consensus 53 ~p~~~v~GNHD~~~~-----~~~~~~~~~-------~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~ 117 (188)
T cd07392 53 VPVLAVPGNCDTPEI-----LGLLTSAGL-------NL--HGKVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GR 117 (188)
T ss_pred CCEEEEcCCCCCHHH-----HHhhhcCcE-------ec--CCCEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hh
Confidence 899999999997321 111100000 00 11345688999999987432 23467899998 44
Q ss_pred HhhccCCCCCeEEEEeCCCCcCC-CCCCccchHHHHHHHHHHHHHcCccEEEecccccee
Q 017367 176 LANVDRSVTPWLVATWHPPWYSS-YSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 176 L~~~~~~~~~~iIv~~H~P~~~~-~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
|.... .+..|+++|+|++.. ............+.+.+++++++++++||||+|...
T Consensus 118 l~~~~---~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 118 LNNLL---AKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred hhccC---CCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 44332 234788888888653 111111111224678899999999999999999854
No 17
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.78 E-value=3.8e-18 Score=154.72 Aligned_cols=176 Identities=18% Similarity=0.211 Sum_probs=106.3
Q ss_pred EEEEEecCCCCCCh-------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 21 RIAIVGDLGLTYNT-------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 21 r~~~igD~h~~~~~-------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
||+++||+|..... .++++.+.+.++|+||++||++.. . + +...+.+
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~------~-------------------~-~~~~~~~ 54 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND------F-------------------Q-RSLPFIE 54 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc------h-------------------h-hHHHHHH
Confidence 68999999965321 235566667899999999999931 0 0 1112233
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccC-----------
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISY----------- 162 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~----------- 162 (373)
.+.++ ...|+++++||||+..... +..+.+.+. .....+.++.+..++++|++++...++
T Consensus 55 ~l~~~-~~~pv~~v~GNHD~~~~~~---~~~~~~~~~-----~~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~ 125 (239)
T TIGR03729 55 KLQEL-KGIKVTFNAGNHDMLKDLT---YEEIESNDS-----PLYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEI 125 (239)
T ss_pred HHHHh-cCCcEEEECCCCCCCCCCC---HHHHHhccc-----hhhhcccccccCCCceEEEeeccceecccccccCHHHH
Confidence 33322 4689999999999852211 121221110 001222333444578899988843221
Q ss_pred ---------------C-----CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCC------CCccchH--HHHHHHH
Q 017367 163 ---------------D-----KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYS------SHYREAE--CMRVEME 214 (373)
Q Consensus 163 ---------------~-----~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~------~~~~~~~--~~~~~l~ 214 (373)
. ...+|++||++.|+++.. .+ +|+++|+|+..... ..+.... ...+.|.
T Consensus 126 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~~-~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~ 202 (239)
T TIGR03729 126 LRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDN--KQ-VIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFG 202 (239)
T ss_pred HHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCC--CC-EEEEEcccchHHHhcCCCCCcchhhhhhccChHHHH
Confidence 0 136789999999988753 23 66777777643211 1111111 1147899
Q ss_pred HHHHHcCccEEEecccccee
Q 017367 215 ALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 215 ~ll~~~~v~lvl~GH~H~~~ 234 (373)
+++++++++++|+||+|.-.
T Consensus 203 ~li~~~~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 203 QLLVKYEIKDVIFGHLHRRF 222 (239)
T ss_pred HHHHHhCCCEEEECCccCCC
Confidence 99999999999999999854
No 18
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.77 E-value=6.1e-19 Score=150.04 Aligned_cols=188 Identities=23% Similarity=0.271 Sum_probs=97.3
Q ss_pred eEEEEEecCCCCCChH-----HHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHH-H
Q 017367 20 KRIAIVGDLGLTYNTT-----CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG-R 93 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~-----~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~-~ 93 (373)
+||+++||+|...... .......+.++|+||++||+++.. . ....+.... .
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~------~-----------------~~~~~~~~~~~ 57 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGG------N-----------------PSEEWRAQFWF 57 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSS------S-----------------HHHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccc------c-----------------ccccchhhhcc
Confidence 6999999999875433 233444567999999999999642 1 011111111 1
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccC-CCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCC---hHHH
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA-FPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKS---GHQY 169 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~---~~Q~ 169 (373)
........+|+++++||||.................. ..........+........................ ..++
T Consensus 58 ~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (200)
T PF00149_consen 58 FIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWW 137 (200)
T ss_dssp HHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHH
T ss_pred chhhhhccccccccccccccceeccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcc
Confidence 2233356899999999999863211110011110000 00000000000001111122222222221111112 2233
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc--chHHHHHHHHHHHHHcCccEEEeccccce
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAY 233 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~~ 233 (373)
.|+...+.. ...+++||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 138 ~~~~~~~~~---~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 138 LWLLLLLEA---KNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHE---EEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccc---ccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 333333332 34467999999999876543211 01234678889999999999999999986
No 19
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.77 E-value=7.4e-18 Score=148.58 Aligned_cols=150 Identities=20% Similarity=0.213 Sum_probs=95.2
Q ss_pred CeEEEEEecCCCCCCh------------HHHHHH-HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 19 PKRIAIVGDLGLTYNT------------TCTINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~------------~~~l~~-l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
.+||++++|+|.+... .+.+.+ +.+.+||+||++||+++.... . .
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~--------------------~--~ 59 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENT--------------------N--D 59 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCC--------------------c--h
Confidence 4899999999986432 122333 335689999999999963210 0 0
Q ss_pred HHHHHHHHHHhhhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCC
Q 017367 86 PRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDK 164 (373)
Q Consensus 86 ~~~~~~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~ 164 (373)
..+..+.++++.+. .++|+++++||||. ....
T Consensus 60 ~~~~~~~~~~~~l~~~~~p~~~~~GNHD~-----------------------------------------------~g~l 92 (199)
T cd07383 60 NSTSALDKAVSPMIDRKIPWAATFGNHDG-----------------------------------------------YDWI 92 (199)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECccCCC-----------------------------------------------CCCC
Confidence 12334455555552 37999999999991 1124
Q ss_pred ChHHHHHHHHHHhhcc--CCCCCeEEEEeCCCCcCCCCCCc---------cc---hHHHHHHHHHH-HHHcCccEEEecc
Q 017367 165 SGHQYKWLEKDLANVD--RSVTPWLVATWHPPWYSSYSSHY---------RE---AECMRVEMEAL-LYSYGVDIVFNGH 229 (373)
Q Consensus 165 ~~~Q~~WL~~~L~~~~--~~~~~~iIv~~H~P~~~~~~~~~---------~~---~~~~~~~l~~l-l~~~~v~lvl~GH 229 (373)
..+|++||+++|++.. +....+.++++|+|+......+. .+ .......+.++ ++..+|+++|+||
T Consensus 93 ~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH 172 (199)
T cd07383 93 RPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGH 172 (199)
T ss_pred CHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCC
Confidence 5799999999999873 12234578888888754321110 01 01122334444 4556899999999
Q ss_pred ccceeeee
Q 017367 230 VHAYERSN 237 (373)
Q Consensus 230 ~H~~~r~~ 237 (373)
+|.++...
T Consensus 173 ~H~~~~~~ 180 (199)
T cd07383 173 DHGNDFCG 180 (199)
T ss_pred CCCcceec
Confidence 99976653
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.77 E-value=1.6e-17 Score=159.42 Aligned_cols=114 Identities=22% Similarity=0.263 Sum_probs=78.7
Q ss_pred CcceEEEE-eCCEEEEEEccccc-----CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc-----chHH
Q 017367 140 SSFYYSFN-AGGIHFIMLGAYIS-----YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR-----EAEC 208 (373)
Q Consensus 140 ~~~~ys~~-~g~~~fi~ldt~~~-----~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~-----~~~~ 208 (373)
+..||+|+ .++++||+|||... .....+|++||+++|++.. .+++||++|||++........ ....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a~---~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRASS---DTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcCC---CCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 89999999999743 2357999999999999753 235888999998765432211 1112
Q ss_pred HHHHHHHHHHHc-CccEEEeccccceeeeeecc-cCccCCCCCEEEEeCC
Q 017367 209 MRVEMEALLYSY-GVDIVFNGHVHAYERSNRVF-NYTLDPCGPVHITIGD 256 (373)
Q Consensus 209 ~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~-~~~~~~~g~~yi~~G~ 256 (373)
..++|.++|+++ +|.++||||+|......-.. +......|.+.|.+++
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~~~~~~~~~~p~~gfweI~TaS 416 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKITAHRRVEGVGKDKGFWEINTAS 416 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccccccCCCCCCCcCCeEEEeccc
Confidence 357899999999 89999999999866442100 0000123566676654
No 21
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.73 E-value=5.1e-16 Score=153.64 Aligned_cols=231 Identities=23% Similarity=0.332 Sum_probs=113.9
Q ss_pred CCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHh-CCCCEEEEcCcccccccc--ccCCCCCCccc--cCCC
Q 017367 2 SDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSS-NEPDLVLLVGDVTYANLY--LTNGTGSDCYS--CSFS 76 (373)
Q Consensus 2 s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~-~~pd~vi~~GDl~y~~~~--~~~g~~~~~~~--~~~~ 76 (373)
|.+.+|+|+|..... ++||++.|+.+.......+++.+.+ .+|||+|++||.+|.+.. ........... ....
T Consensus 90 s~~g~~rT~p~~~~~--~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~ 167 (453)
T PF09423_consen 90 SPVGRFRTAPDGDPD--PFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAH 167 (453)
T ss_dssp ---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S-----SSS
T ss_pred CCceEEEcCCCCCCC--ceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCccccccccccccccccccc
Confidence 567899999665433 5999999999876556778888888 699999999999998741 00000000000 0000
Q ss_pred CCCCcccchHHHHHHH--HHHhhhhcCCCeEEecCCCCcCCCCCCc------------------chhhhhcccCCCCCC-
Q 017367 77 KTPIHETYQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGNQ------------------TFVAYSSRFAFPSEE- 135 (373)
Q Consensus 77 ~~~~~~~y~~~~~~~~--~~l~~l~~~~P~~~v~GNHD~~~~~~~~------------------~~~~~~~~~~~p~~~- 135 (373)
.....+.|+..|..+. ..++.+.+.+|+++++-.||+..+.... .+..|..........
T Consensus 168 ~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~~p~r~~~~ 247 (453)
T PF09423_consen 168 EAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEYQPVRNPDP 247 (453)
T ss_dssp S--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHHS---GGG-
T ss_pred ccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhhcCccCCCc
Confidence 1122334554454432 3456667789999999999997653210 011222211111100
Q ss_pred CCCCCcceEEEEeCC-EEEEEEcccccCC---------------------CChHHHHHHHHHHhhccCCCCCeEEEEeCC
Q 017367 136 SGSLSSFYYSFNAGG-IHFIMLGAYISYD---------------------KSGHQYKWLEKDLANVDRSVTPWLVATWHP 193 (373)
Q Consensus 136 ~~~~~~~~ys~~~g~-~~fi~ldt~~~~~---------------------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~ 193 (373)
.......|++|.+|+ +.|++||+..... .+.+|++||++.|++.. .+|+|+..-.
T Consensus 248 ~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~s~---a~~kvi~s~v 324 (453)
T PF09423_consen 248 PGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLASSQ---ATWKVIGSSV 324 (453)
T ss_dssp BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS
T ss_pred cCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhcCC---CcEEEEEeCC
Confidence 112345789999999 9999999863211 36899999999999853 6799998877
Q ss_pred CCcCCCC-----------CCccchHHHHHHHHHHHHHcCcc--EEEeccccceeeee
Q 017367 194 PWYSSYS-----------SHYREAECMRVEMEALLYSYGVD--IVFNGHVHAYERSN 237 (373)
Q Consensus 194 P~~~~~~-----------~~~~~~~~~~~~l~~ll~~~~v~--lvl~GH~H~~~r~~ 237 (373)
|+..... ..+......|++|.++|++.++. ++|+|..|......
T Consensus 325 ~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 325 PFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp --S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEE
T ss_pred ceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeee
Confidence 7643221 12233445688999999888664 88999999877664
No 22
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.73 E-value=1.2e-16 Score=149.09 Aligned_cols=179 Identities=26% Similarity=0.363 Sum_probs=120.2
Q ss_pred eEEEEEecCCCCC-C--h----HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHH
Q 017367 20 KRIAIVGDLGLTY-N--T----TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 92 (373)
Q Consensus 20 ~r~~~igD~h~~~-~--~----~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~ 92 (373)
+||++|||+|... . . .++++.++..+||+||++||++.. |. ...++.+.
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~------~~------------------~~~~~~~~ 56 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND------GE------------------PEEYRRLK 56 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC------CC------------------HHHHHHHH
Confidence 5899999999872 2 1 345677777899999999999952 33 23455666
Q ss_pred HHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEe-CCEEEEEEccccc----CCCChH
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNA-GGIHFIMLGAYIS----YDKSGH 167 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~-g~~~fi~ldt~~~----~~~~~~ 167 (373)
++++.+....|++++|||||..... ...+...+.... ..+..... ++++++.+|+... ......
T Consensus 57 ~~l~~~~~~~~~~~vpGNHD~~~~~----~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~ 125 (301)
T COG1409 57 ELLARLELPAPVIVVPGNHDARVVN----GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAE 125 (301)
T ss_pred HHHhhccCCCceEeeCCCCcCCchH----HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHH
Confidence 7777555588999999999986432 222222221110 01111122 6789999999754 235799
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcC--ccEEEeccccce
Q 017367 168 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYG--VDIVFNGHVHAY 233 (373)
Q Consensus 168 Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~--v~lvl~GH~H~~ 233 (373)
|++||++.|++........+|+++|+|..................+..++..++ |+++|+||.|..
T Consensus 126 q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 126 QLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999999999987643112468888888766443332223333466777888887 999999999975
No 23
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.68 E-value=6e-16 Score=129.15 Aligned_cols=132 Identities=27% Similarity=0.386 Sum_probs=90.9
Q ss_pred EEEEecCCCCCChH-----------HHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHH
Q 017367 22 IAIVGDLGLTYNTT-----------CTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDY 90 (373)
Q Consensus 22 ~~~igD~h~~~~~~-----------~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~ 90 (373)
|+++||+|.+.... ..++.+.+.++|+|+++||+++. +. +.+|+.
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~------------------~~~~~~ 56 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQR------GL------------------PEEFEE 56 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCC------CC------------------HHHHHH
Confidence 57899999865321 13445556799999999999953 22 245666
Q ss_pred HHHHHhhhhcC-CCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHH
Q 017367 91 WGRFMQNLVSK-VPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQY 169 (373)
Q Consensus 91 ~~~~l~~l~~~-~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~ 169 (373)
+.++++.+... +|++.++||||.
T Consensus 57 ~~~~~~~l~~~~~~~~~v~GNHD~-------------------------------------------------------- 80 (144)
T cd07400 57 AREFLDALPAPLEPVLVVPGNHDV-------------------------------------------------------- 80 (144)
T ss_pred HHHHHHHccccCCcEEEeCCCCeE--------------------------------------------------------
Confidence 77778877433 699999999995
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCC
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGP 249 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~ 249 (373)
|+++|+|++.......... ...+.+.+++++++++++|+||+|......-. ...+++
T Consensus 81 ------------------iv~~Hhp~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~l~GH~H~~~~~~~~----~~~~~~ 137 (144)
T cd07400 81 ------------------IVVLHHPLVPPPGSGRERL-LDAGDALKLLAEAGVDLVLHGHKHVPYVGNIS----NAGGGL 137 (144)
T ss_pred ------------------EEEecCCCCCCCccccccC-CCHHHHHHHHHHcCCCEEEECCCCCcCeeecc----CCCCCE
Confidence 6777877766533221111 14567899999999999999999986654211 124456
Q ss_pred EEEEeCC
Q 017367 250 VHITIGD 256 (373)
Q Consensus 250 ~yi~~G~ 256 (373)
.++.+|+
T Consensus 138 ~~~~aGs 144 (144)
T cd07400 138 VVIGAGT 144 (144)
T ss_pred EEEecCC
Confidence 6776664
No 24
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.67 E-value=4.4e-15 Score=131.98 Aligned_cols=174 Identities=13% Similarity=0.148 Sum_probs=103.5
Q ss_pred CCeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 18 YPKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
++.||+++||+|..... .++++.+.+.++|+||++||+++. +.. ...+..+.+.+.
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~------g~~-----------------~~~~~~~l~~l~ 59 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPK------AAK-----------------SEDYAAFFRILG 59 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CCC-----------------HHHHHHHHHHHH
Confidence 36899999999965433 334454555789999999999952 210 112223333343
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhhcccC----CCCCCCCCCCcceEEEEe-CCEEEEEEcccccC--CCChHHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA----FPSEESGSLSSFYYSFNA-GGIHFIMLGAYISY--DKSGHQY 169 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~ys~~~-g~~~fi~ldt~~~~--~~~~~Q~ 169 (373)
.+ ..|+++|+||||.. ........|. .|... ..... ...+ |+++|++++..... ..+++|.
T Consensus 60 ~l--~~pv~~V~GNhD~~------v~~~l~~~~~~~~~~p~~~--~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~ 127 (224)
T cd07388 60 EA--HLPTFYVPGPQDAP------LWEYLREAYNAELVHPEIR--NVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEA 127 (224)
T ss_pred hc--CCceEEEcCCCChH------HHHHHHHHhcccccCccce--ecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHH
Confidence 33 68999999999962 0111111121 12110 01111 2344 55999999976433 3355552
Q ss_pred ----HHHHH-HHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecccc
Q 017367 170 ----KWLEK-DLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVH 231 (373)
Q Consensus 170 ----~WL~~-~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H 231 (373)
+||.+ .|+...+...+..|+++|+|++.....+. -.+.+.++++++++.+++|||+|
T Consensus 128 ~~~~~~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 128 LRYPAWVAEYRLKALWELKDYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhhhhhHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 56533 22222111223578899999988742221 23678889999999999999999
No 25
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.65 E-value=2.7e-15 Score=134.57 Aligned_cols=187 Identities=20% Similarity=0.207 Sum_probs=111.9
Q ss_pred CeEEEEEecCCCCCC-----hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 19 ~~r~~~igD~h~~~~-----~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
++||+++||+|.... ..+.++.+.+.+||+|+++||+++.. . ... +.+.+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~------~------------------~~~-~~~~~ 55 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGS------V------------------DVL-ELLLE 55 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCc------c------------------hhh-HHHHH
Confidence 489999999998743 24566667778999999999999531 1 000 24556
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHH
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLE 173 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~ 173 (373)
.++.+....|+++++||||....... .+....+...+. ...+....++.++..+..+.-.. .....+++.
T Consensus 56 ~l~~l~~~~~v~~v~GNHD~~~~~~~-~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~ 125 (223)
T cd07385 56 LLKKLKAPLGVYAVLGNHDYYSGDEE-NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLE 125 (223)
T ss_pred HHhccCCCCCEEEECCCcccccCchH-HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHH
Confidence 66666667899999999998643211 101111111111 12233455666665444443111 112234566
Q ss_pred HHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCc----------
Q 017367 174 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT---------- 243 (373)
Q Consensus 174 ~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~---------- 243 (373)
+.++..+. ..+.|++.|.|.+.. .+.+.++|++|+||+|..|...|.....
T Consensus 126 ~~~~~~~~--~~~~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~ 186 (223)
T cd07385 126 KALKGLDE--DDPNILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYD 186 (223)
T ss_pred HHHhCCCC--CCCEEEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCccc
Confidence 66665442 345899999876321 1145689999999999999877654321
Q ss_pred ----cCCCCCEEEEeCCCCC
Q 017367 244 ----LDPCGPVHITIGDGGN 259 (373)
Q Consensus 244 ----~~~~g~~yi~~G~gG~ 259 (373)
...+..+||.+|.|..
T Consensus 187 ~G~~~~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 187 YGLYRKGGSQLYVSRGLGTW 206 (223)
T ss_pred ceEEEECCEEEEEcCCccCC
Confidence 1233466777766654
No 26
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.65 E-value=5.8e-15 Score=140.44 Aligned_cols=93 Identities=19% Similarity=0.237 Sum_probs=67.4
Q ss_pred CcceEEEE-eCCE--EEEEEccccc-----------CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCc--
Q 017367 140 SSFYYSFN-AGGI--HFIMLGAYIS-----------YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHY-- 203 (373)
Q Consensus 140 ~~~~ys~~-~g~~--~fi~ldt~~~-----------~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~-- 203 (373)
+..||+|+ .+++ ++|+||+... .....+|++||+++|+.+.+ +.+++|+++|+|+.+......
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhh
Confidence 34599999 5855 9999998641 12469999999999998864 446789999999875221110
Q ss_pred -c----------chHHHHHHHHHHHHHc-CccEEEeccccce
Q 017367 204 -R----------EAECMRVEMEALLYSY-GVDIVFNGHVHAY 233 (373)
Q Consensus 204 -~----------~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~ 233 (373)
. .......+|.++|.+| +|.++||||.|..
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 0 0011124799999999 7999999999973
No 27
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.65 E-value=7e-16 Score=131.96 Aligned_cols=145 Identities=20% Similarity=0.297 Sum_probs=86.1
Q ss_pred EEEEecCCCCCChHHH-H-HHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhh
Q 017367 22 IAIVGDLGLTYNTTCT-I-NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 99 (373)
Q Consensus 22 ~~~igD~h~~~~~~~~-l-~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~ 99 (373)
|+++||+|.+...... + +.+.+.++|+|+++||+++. +. ...+ ........
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~------~~------------------~~~~---~~~~~~~~ 53 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYL------TD------------------APRF---APLLLALK 53 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCC------cc------------------hHHH---HHHHHhhc
Confidence 5789999987644322 2 33445689999999999952 11 0111 11223334
Q ss_pred cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCC-CChHHHHHHHHHHhh
Q 017367 100 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD-KSGHQYKWLEKDLAN 178 (373)
Q Consensus 100 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~-~~~~Q~~WL~~~L~~ 178 (373)
...|+++++||||.. ++|+......++. ...++++|+.+++.
T Consensus 54 ~~~~v~~v~GNHD~~------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~- 96 (166)
T cd07404 54 GFEPVIYVPGNHEFY------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR- 96 (166)
T ss_pred CCccEEEeCCCcceE------------------------------------EEEEeeecccccCccchHHHHhCCCCCC-
Confidence 578999999999984 2222222111111 12344455544443
Q ss_pred ccCCCCCeEEEEeCCCCcCCCCCCcc----chHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 179 VDRSVTPWLVATWHPPWYSSYSSHYR----EAECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 179 ~~~~~~~~iIv~~H~P~~~~~~~~~~----~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
. .+||++|+|+......... .....++.+.+++++++|++++|||+|.....
T Consensus 97 -----~-~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~~ 152 (166)
T cd07404 97 -----G-KTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFDY 152 (166)
T ss_pred -----C-CEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccceE
Confidence 1 2677778877664322211 11234566778888899999999999986443
No 28
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.64 E-value=4.1e-14 Score=128.50 Aligned_cols=256 Identities=21% Similarity=0.250 Sum_probs=143.8
Q ss_pred CCeEEEEEecCCCCCC--------------------hHHHHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCC
Q 017367 18 YPKRIAIVGDLGLTYN--------------------TTCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFS 76 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~--------------------~~~~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~ 76 (373)
.+|||+.++|+|.+.. ....|.++. .++||||+++||++++...
T Consensus 52 g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t--------------- 116 (379)
T KOG1432|consen 52 GTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST--------------- 116 (379)
T ss_pred CceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc---------------
Confidence 3799999999997643 123455554 5799999999999964211
Q ss_pred CCCCcccchHHHHHHHHHHhhh-hcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCC---CCCc-------ceEE
Q 017367 77 KTPIHETYQPRWDYWGRFMQNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESG---SLSS-------FYYS 145 (373)
Q Consensus 77 ~~~~~~~y~~~~~~~~~~l~~l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~---~~~~-------~~ys 145 (373)
..++ ..+++.+++. ..++||.+++||||-...........+... +|...+. ..+. ..|-
T Consensus 117 -----~Da~---~sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn 186 (379)
T KOG1432|consen 117 -----QDAA---TSLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYN 186 (379)
T ss_pred -----HhHH---HHHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhc--CCCccccCCCcccceeeeecccceE
Confidence 0111 2355666665 679999999999998765433333333221 1211100 0011 1111
Q ss_pred EEeC-----------CEEEEEEcccccC----------CCChHHHHHHHHHHhhc---cCCCCC-eEEEEeCCCCcC--C
Q 017367 146 FNAG-----------GIHFIMLGAYISY----------DKSGHQYKWLEKDLANV---DRSVTP-WLVATWHPPWYS--S 198 (373)
Q Consensus 146 ~~~g-----------~~~fi~ldt~~~~----------~~~~~Q~~WL~~~L~~~---~~~~~~-~iIv~~H~P~~~--~ 198 (373)
.... -..+++||+..+- .....|++||+..-..- ...-.| .-+++.|.|+-. .
T Consensus 187 ~~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~ 266 (379)
T KOG1432|consen 187 LQIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLE 266 (379)
T ss_pred EEeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhh
Confidence 1111 1345566654221 23588999999877331 111223 467888998632 1
Q ss_pred CCC------Cccc---hHHHHHHHHHHHH-HcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccccccccC
Q 017367 199 YSS------HYRE---AECMRVEMEALLY-SYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKMSITHA 268 (373)
Q Consensus 199 ~~~------~~~~---~~~~~~~l~~ll~-~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~~~~~~ 268 (373)
... ...+ .......+...|. ..+|++|++||.|......+ -.+.+++.=|+|+..-++.
T Consensus 267 ~~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~-------~k~~~wlCygGgaGyggYg---- 335 (379)
T KOG1432|consen 267 LESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGE-------LKGELWLCYGGGAGYGGYG---- 335 (379)
T ss_pred ccCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccccceecc-------cCCeEEEEecCCCccCCcC----
Confidence 111 0111 1112344555665 77999999999999776654 3454777666554432110
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccccCCCCCCcccCCCCCccccccCCceeEEEEEe-cCCeEEEEEEEecCCCceeeE
Q 017367 269 DEPGNCPEPSSTPDPYMGGFCATNFTSGPAAGKFCWDRQPDYSAFRESSFGHGILEVK-NETWALWTWHRNQDSNNKVGD 347 (373)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~l~v~-~~t~l~~~~~~~~~~~~~v~d 347 (373)
.+.|- .+=-++++. +...+ -+|+|.+|+..+|+|
T Consensus 336 --------------------------------------~~gw~------Rr~Rv~e~d~~~~~I-kTWKRl~d~~~~~~D 370 (379)
T KOG1432|consen 336 --------------------------------------IGGWE------RRARVFELDLNKDRI-KTWKRLDDKPLSVID 370 (379)
T ss_pred --------------------------------------cCCcc------cceEEEEcccccccc-ceeeecCCCCcceee
Confidence 01111 123345553 44444 469999998888989
Q ss_pred EEEEEeC
Q 017367 348 QIYIVRQ 354 (373)
Q Consensus 348 ~~~i~k~ 354 (373)
.-.+.+.
T Consensus 371 ~q~l~d~ 377 (379)
T KOG1432|consen 371 YQLLYDG 377 (379)
T ss_pred eEEEecc
Confidence 8777654
No 29
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.63 E-value=8.1e-15 Score=135.24 Aligned_cols=164 Identities=15% Similarity=0.131 Sum_probs=97.8
Q ss_pred CeEEEEEecCCCCCC-----hHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 19 PKRIAIVGDLGLTYN-----TTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 19 ~~r~~~igD~h~~~~-----~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
++||+++||+|.+.. ..++++.+++.+||+|+++||+++. +. ...++.+.+
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~------~~------------------~~~~~~~~~ 104 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLF------DM------------------PLNFSAFSD 104 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCC------Cc------------------cccHHHHHH
Confidence 699999999998632 2345666777899999999999942 11 012344666
Q ss_pred HHhhhhcCCCeEEecCCCCcCCCCCC-cchhhhhcccCCCCCCCCCCCcceEEEEeCC--EEEEEEcccccCCCChHHHH
Q 017367 94 FMQNLVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYSFNAGG--IHFIMLGAYISYDKSGHQYK 170 (373)
Q Consensus 94 ~l~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~--~~fi~ldt~~~~~~~~~Q~~ 170 (373)
.++.+.+..|+++|+||||+...... +.+....+.-.. ....+....+..++ +.+++++........
T Consensus 105 ~L~~L~~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi-----~lL~n~~~~i~~~~~~i~i~G~~d~~~~~~~----- 174 (271)
T PRK11340 105 VLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGI-----TVLFNQATVIATPNRQFELVGTGDLWAGQCK----- 174 (271)
T ss_pred HHHHHhhcCCEEEecCCCCcccCccchHHHHHHHHhcCc-----EEeeCCeEEEeeCCcEEEEEEecchhccCCC-----
Confidence 77777666899999999998532111 111112111111 01223344455543 566677542211101
Q ss_pred HHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeec
Q 017367 171 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRV 239 (373)
Q Consensus 171 WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~ 239 (373)
..+.+++ . ...|++.|.|-.. +.+.+.++|++||||+|.-|...|.
T Consensus 175 -~~~~~~~----~-~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 175 -PPPASEA----N-LPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred -hhHhcCC----C-CCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 1111211 2 2478999999632 1234568999999999999987664
No 30
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.61 E-value=8.5e-15 Score=131.11 Aligned_cols=185 Identities=16% Similarity=0.158 Sum_probs=102.4
Q ss_pred EEEEEecCCCCCCh----------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 21 RIAIVGDLGLTYNT----------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 21 r~~~igD~h~~~~~----------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
||+++||+|++... .++++.+.+.++|+||++||++.... ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~----~~------------------ 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN----PS------------------ 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC----CC------------------
Confidence 68999999987421 23444555679999999999995310 00
Q ss_pred hHHHHHHHHHHhhhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCC--CCCCCCcceEEEEeCCEEEEEEccccc
Q 017367 85 QPRWDYWGRFMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE--ESGSLSSFYYSFNAGGIHFIMLGAYIS 161 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~ys~~~g~~~fi~ldt~~~ 161 (373)
...+..+.+.++.+. ..+|+++++||||....... ............. ...........+...++.|++++....
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~ 136 (223)
T cd00840 59 PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRR 136 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEecCCCCCcccccc--ccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCH
Confidence 123455666666663 48999999999998643211 1111100000000 000011112223344577777765422
Q ss_pred CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 162 YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 162 ~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
. ....+++++++.+.... .....|++.|.|+.......... .......+...+++++++||.|..+..
T Consensus 137 ~-~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 137 S-RLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred H-HHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 1 12334444455554443 23458999999876543221110 122334456678999999999987653
No 31
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.58 E-value=3.1e-15 Score=105.56 Aligned_cols=43 Identities=40% Similarity=0.686 Sum_probs=32.1
Q ss_pred CCCCCccccccCCceeEEEEEecCCeEEEEEEEecCCCceeeEEE
Q 017367 305 DRQPDYSAFRESSFGHGILEVKNETWALWTWHRNQDSNNKVGDQI 349 (373)
Q Consensus 305 ~~~~~~~~~~~~~~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~ 349 (373)
.++|+|+++|..+|||++|+|.|+|+|+|+|++++|+ +|+|+|
T Consensus 20 ~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g--~v~D~f 62 (62)
T PF14008_consen 20 YPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDG--SVLDEF 62 (62)
T ss_dssp SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS---T-CEE-
T ss_pred CCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCC--cEecCC
Confidence 4678999999999999999999999999999998877 899997
No 32
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.54 E-value=4.5e-13 Score=119.40 Aligned_cols=195 Identities=21% Similarity=0.239 Sum_probs=103.8
Q ss_pred eEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhh
Q 017367 20 KRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 99 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~ 99 (373)
+||+++||+|..... ..++.+.+.+||+|+++||++.. . ..+.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~-------~----------------------~~~~~~l~~l- 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE-------S----------------------VQLVRAISSL- 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC-------h----------------------HHHHHHHHhC-
Confidence 589999999976543 33456667799999999999831 0 1233334444
Q ss_pred cCCCeEEecCCCCcCCCCCC-cchhhhhcccCCCCCCCCCCCcceEE---EEeCCEEEEEEccccc--------------
Q 017367 100 SKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEESGSLSSFYYS---FNAGGIHFIMLGAYIS-------------- 161 (373)
Q Consensus 100 ~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~ys---~~~g~~~fi~ldt~~~-------------- 161 (373)
..|+++++||||....... ..+..+.+.... .+..+.. .++....+.++.+...
T Consensus 50 -~~p~~~V~GNHD~~~~~~~~~k~~~l~~~L~~-------lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr 121 (238)
T cd07397 50 -PLPKAVILGNHDAWYDATFRKKGDRVQEQLEL-------LGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVK 121 (238)
T ss_pred -CCCeEEEcCCCcccccccccchHHHHHHHHHH-------hCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHH
Confidence 5799999999998653211 012223222211 1111111 2233333333333211
Q ss_pred --CC--CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCC-------------CccchHHHHHHHHHHHHHcCccE
Q 017367 162 --YD--KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSS-------------HYREAECMRVEMEALLYSYGVDI 224 (373)
Q Consensus 162 --~~--~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~-------------~~~~~~~~~~~l~~ll~~~~v~l 224 (373)
+. .-.+-++.+-+.++.+.... + .|++.|.++...++. .......+.+++..+-.+-.+.+
T Consensus 122 ~~fgi~s~~eA~~~ive~~~~~~~~~-~-~VliaH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l 199 (238)
T cd07397 122 AVYGVISLEESAQRIIAAAKKAPPDL-P-LILLAHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPL 199 (238)
T ss_pred HHhCCCCHHHHHHHHHHHhhhcCCCC-C-eEEEeCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCE
Confidence 00 11233444444444333222 2 688889887654311 11123345566655543346899
Q ss_pred EEeccccceeeeee-ccc-CccCCCCCEEEEeC
Q 017367 225 VFNGHVHAYERSNR-VFN-YTLDPCGPVHITIG 255 (373)
Q Consensus 225 vl~GH~H~~~r~~p-~~~-~~~~~~g~~yi~~G 255 (373)
+++||+|.--+... +++ ...+.+|++|+..+
T Consensus 200 ~~fGH~H~~l~~~~~~r~~~~~~~~gt~y~N~a 232 (238)
T cd07397 200 VVFGHMHHRLRRGKGLRNMIAVDREGTVYLNAA 232 (238)
T ss_pred EEeCCccCcccccccccceeeecCCCeEEEecc
Confidence 99999997533321 000 11356789998654
No 33
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.47 E-value=8.3e-13 Score=108.95 Aligned_cols=116 Identities=19% Similarity=0.229 Sum_probs=75.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhc
Q 017367 21 RIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 100 (373)
Q Consensus 21 r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~ 100 (373)
||+++||+|.... .+...++|+|+++||++.. +. ..+++.+.+.++.+
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~------~~------------------~~~~~~~~~~l~~~-- 48 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTER------GT------------------LEELQKFLDWLKSL-- 48 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCC------CC------------------HHHHHHHHHHHHhC--
Confidence 5899999997654 2344689999999999942 21 12334455555555
Q ss_pred CCC-eEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHHhhc
Q 017367 101 KVP-IMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 179 (373)
Q Consensus 101 ~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L~~~ 179 (373)
..| +++|+||||.... .
T Consensus 49 ~~~~~~~v~GNHD~~~~--------------------------------------------------------------~ 66 (135)
T cd07379 49 PHPHKIVIAGNHDLTLD--------------------------------------------------------------P 66 (135)
T ss_pred CCCeEEEEECCCCCcCC--------------------------------------------------------------C
Confidence 334 5789999996310 1
Q ss_pred cCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecccccee
Q 017367 180 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 180 ~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
.+ ..|++.|.|++..............+.+.+++++.+++++|+||+|...
T Consensus 67 --~~--~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 --ED--TDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred --CC--CEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 12 2577788888764322111111223567778888899999999999864
No 34
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.46 E-value=4.6e-13 Score=126.58 Aligned_cols=224 Identities=23% Similarity=0.288 Sum_probs=144.2
Q ss_pred CCceEEEeCCCCCCCCCCeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCcccc------CC
Q 017367 2 SDVYYFRTLPASGPQSYPKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSC------SF 75 (373)
Q Consensus 2 s~~~~F~t~p~~~~~~~~~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~------~~ 75 (373)
|.+-+|+|+|..+....-++|++.|..|.+.+.-.+.+.+.+.+||||||+||.+|.++-. ...++. ..
T Consensus 125 spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~-----~~~~~~~~~~~~~~ 199 (522)
T COG3540 125 SPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPI-----PDEVSLNSWKNVVV 199 (522)
T ss_pred ccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCc-----cccccccccccccc
Confidence 4466789999987553334444444445555566778888889999999999999975421 111110 01
Q ss_pred CC-----CCCcccchHHHHHHH--HHHhhhhcCCCeEEecCCCCcCCCCCC-----------cc--------hhhhhccc
Q 017367 76 SK-----TPIHETYQPRWDYWG--RFMQNLVSKVPIMVVEGNHEIEAQAGN-----------QT--------FVAYSSRF 129 (373)
Q Consensus 76 ~~-----~~~~~~y~~~~~~~~--~~l~~l~~~~P~~~v~GNHD~~~~~~~-----------~~--------~~~~~~~~ 129 (373)
.. ...-+.|+.+|..++ .-++...+..||++.+-.||..++... +. ++.|.+
T Consensus 200 ~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE-- 277 (522)
T COG3540 200 TQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYE-- 277 (522)
T ss_pred CCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHH--
Confidence 11 122346666666543 446777788999999999999865211 11 122222
Q ss_pred CCCCCCCC--CCCcceEEEEeCC-EEEEEEcccccC------C----------------CChHHHHHHHHHHhhccCCCC
Q 017367 130 AFPSEESG--SLSSFYYSFNAGG-IHFIMLGAYISY------D----------------KSGHQYKWLEKDLANVDRSVT 184 (373)
Q Consensus 130 ~~p~~~~~--~~~~~~ys~~~g~-~~fi~ldt~~~~------~----------------~~~~Q~~WL~~~L~~~~~~~~ 184 (373)
.||-.... .....|-+|.+|+ +.|.+||+.... + .+.+|.+||+..|.+ +++
T Consensus 278 ~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---Ska 354 (522)
T COG3540 278 HMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKA 354 (522)
T ss_pred hCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cch
Confidence 24443221 1357889999998 678899986432 1 268999999999998 567
Q ss_pred CeEEEEeCCCCcC----CC---C------CCccchHHHHHHHHHHHHHcCcc--EEEeccccceee
Q 017367 185 PWLVATWHPPWYS----SY---S------SHYREAECMRVEMEALLYSYGVD--IVFNGHVHAYER 235 (373)
Q Consensus 185 ~~iIv~~H~P~~~----~~---~------~~~~~~~~~~~~l~~ll~~~~v~--lvl~GH~H~~~r 235 (373)
.|.|+..-.|+-. .. . ..+.....-|++|+.++++.++. ++|+|.+|....
T Consensus 355 tWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~wA 420 (522)
T COG3540 355 TWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSWA 420 (522)
T ss_pred hhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHHH
Confidence 7998888877521 11 0 01122234488999999998654 899999996443
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.45 E-value=1.3e-12 Score=110.14 Aligned_cols=138 Identities=25% Similarity=0.393 Sum_probs=80.5
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+||+++||+|..... .++++.+ .++|+|+++||++.. ..+.+.++.+
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------------------------~~~~~~~~~~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------------------------EEVLELLRDI 48 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------------------------HHHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------------------------HHHHHHHhcC
Confidence 699999999986432 4556666 579999999999831 2234444443
Q ss_pred hcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHHhh
Q 017367 99 VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLAN 178 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L~~ 178 (373)
|++++.||||.. .+....... + + +..
T Consensus 49 ----~~~~v~GNHD~~---------~~~~~~~~~----------~----------------------------~---~~~ 74 (156)
T PF12850_consen 49 ----PVYVVRGNHDNW---------AFPNENDEE----------Y----------------------------L---LDA 74 (156)
T ss_dssp ----EEEEE--CCHST---------HHHSEECTC----------S----------------------------S---HSE
T ss_pred ----CEEEEeCCcccc---------cchhhhhcc----------c----------------------------c---ccc
Confidence 899999999953 121111000 0 0 001
Q ss_pred ccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCC
Q 017367 179 VDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 258 (373)
Q Consensus 179 ~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG 258 (373)
....-....|++.|.+.+.... ..+.+.+++...+++++|+||+|..+... .+++.++..|+-+
T Consensus 75 ~~~~~~~~~i~~~H~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--------~~~~~~~~~Gs~~ 138 (156)
T PF12850_consen 75 LRLTIDGFKILLSHGHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--------IGGIHVINPGSIG 138 (156)
T ss_dssp EEEEETTEEEEEESSTSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--------ETTEEEEEE-GSS
T ss_pred eeeeecCCeEEEECCCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--------ECCEEEEECCcCC
Confidence 0000112467777776654321 12345677778899999999999977763 4678888888755
Q ss_pred C
Q 017367 259 N 259 (373)
Q Consensus 259 ~ 259 (373)
.
T Consensus 139 ~ 139 (156)
T PF12850_consen 139 G 139 (156)
T ss_dssp S
T ss_pred C
Confidence 4
No 36
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.42 E-value=2.7e-12 Score=103.91 Aligned_cols=116 Identities=28% Similarity=0.483 Sum_probs=80.1
Q ss_pred EEEecCCCCCChHHHH---HHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhh
Q 017367 23 AIVGDLGLTYNTTCTI---NHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLV 99 (373)
Q Consensus 23 ~~igD~h~~~~~~~~l---~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~ 99 (373)
+++||+|......... ....+.++|+||++||+++. +.. ..+..+........
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~------~~~------------------~~~~~~~~~~~~~~ 56 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGD------GPD------------------PEEVLAAALALLLL 56 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCC------CCC------------------chHHHHHHHHHhhc
Confidence 4789999876544332 34456799999999999963 110 11122221223335
Q ss_pred cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHHHhhc
Q 017367 100 SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKDLANV 179 (373)
Q Consensus 100 ~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~L~~~ 179 (373)
...|+++++||||
T Consensus 57 ~~~~~~~~~GNHD------------------------------------------------------------------- 69 (131)
T cd00838 57 LGIPVYVVPGNHD------------------------------------------------------------------- 69 (131)
T ss_pred CCCCEEEeCCCce-------------------------------------------------------------------
Confidence 6899999999999
Q ss_pred cCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 180 DRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 180 ~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
|++.|.|++.............+..+..++.+.+++++|+||+|.+++..
T Consensus 70 --------i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 70 --------ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred --------EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 88889998765433222222246778888999999999999999988864
No 37
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.37 E-value=1e-11 Score=114.38 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=57.4
Q ss_pred CCeEEEEEecCCCCCCh---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH
Q 017367 18 YPKRIAIVGDLGLTYNT---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF 94 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~---~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 94 (373)
..+||+++||+|..... .+.+.++....||+|+++||++... . .+....+...
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~-----~-------------------~~~~~~~~~~ 98 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGD-----R-------------------PPGVAALALF 98 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCC-----C-------------------CCCHHHHHHH
Confidence 46999999999976544 3455566677889999999999520 0 1234567788
Q ss_pred HhhhhcCCCeEEecCCCCcCCC
Q 017367 95 MQNLVSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 95 l~~l~~~~P~~~v~GNHD~~~~ 116 (373)
+++|.+..+++++.||||+...
T Consensus 99 L~~L~~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 99 LAKLKAPLGVFAVLGNHDYGVD 120 (284)
T ss_pred HHhhhccCCEEEEecccccccc
Confidence 8888888999999999999754
No 38
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.34 E-value=2.8e-10 Score=98.25 Aligned_cols=40 Identities=30% Similarity=0.478 Sum_probs=29.9
Q ss_pred HHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCC
Q 017367 212 EMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGN 259 (373)
Q Consensus 212 ~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~ 259 (373)
.+..+.++.+++++++||+|...... .+|.+++..|+.|.
T Consensus 97 ~~~~~~~~~~~dvii~GHTH~p~~~~--------~~g~~viNPGSv~~ 136 (178)
T cd07394 97 SLAALQRQLDVDILISGHTHKFEAFE--------HEGKFFINPGSATG 136 (178)
T ss_pred HHHHHHHhcCCCEEEECCCCcceEEE--------ECCEEEEECCCCCC
Confidence 44555667789999999999765432 35788999998764
No 39
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.32 E-value=6e-11 Score=100.55 Aligned_cols=61 Identities=20% Similarity=0.336 Sum_probs=43.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhC-CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~-~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
+|++++||+|..... ...++.+... ++|.|+++||++. ....+.++.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~-------------------------------~~~~~~l~~ 49 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS-------------------------------PFVLKEFED 49 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC-------------------------------HHHHHHHHH
Confidence 589999999976543 3344445555 8999999999982 012233344
Q ss_pred hhcCCCeEEecCCCCc
Q 017367 98 LVSKVPIMVVEGNHEI 113 (373)
Q Consensus 98 l~~~~P~~~v~GNHD~ 113 (373)
+ ..|++.|.||||.
T Consensus 50 ~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 50 L--AAKVIAVRGNNDG 63 (158)
T ss_pred h--CCceEEEccCCCc
Confidence 3 5689999999996
No 40
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=99.32 E-value=3.8e-11 Score=117.15 Aligned_cols=179 Identities=17% Similarity=0.266 Sum_probs=106.4
Q ss_pred HHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCc
Q 017367 36 CTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEI 113 (373)
Q Consensus 36 ~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~ 113 (373)
.+|+.|.+. ++|+|+++||++-.+.|. ...+.--.....+.+.|.+...++|+|+++||||.
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~----------------~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~ 262 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWA----------------QTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEI 262 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchh----------------hhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCC
Confidence 456666543 499999999999654220 11111111233344556666679999999999998
Q ss_pred CCCC-------CCc-----chhhhhc---ccCCCCCCCCCCCcceEEEE-eCCEEEEEEcccccC----------CCChH
Q 017367 114 EAQA-------GNQ-----TFVAYSS---RFAFPSEESGSLSSFYYSFN-AGGIHFIMLGAYISY----------DKSGH 167 (373)
Q Consensus 114 ~~~~-------~~~-----~~~~~~~---~~~~p~~~~~~~~~~~ys~~-~g~~~fi~ldt~~~~----------~~~~~ 167 (373)
.... ... .|..+.. .|.-+........+.+|... .+|.++|+||+..-+ .....
T Consensus 263 ~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~ 342 (577)
T KOG3770|consen 263 HPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPID 342 (577)
T ss_pred CcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchH
Confidence 6421 001 1111211 22222222233455667644 589999999986432 12477
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc--CccEEEeccccceeee
Q 017367 168 QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY--GVDIVFNGHVHAYERS 236 (373)
Q Consensus 168 Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~--~v~lvl~GH~H~~~r~ 236 (373)
|++|+..+|.+++..+. -|-+++|.|+-... .. ......+-.++.++ -+...|.||+|.-+..
T Consensus 343 ~lqWf~~~L~~ae~~Ge-kVhil~HIPpG~~~-c~----~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 343 QLQWFVDQLQEAESAGE-KVHILGHIPPGDGV-CL----EGWSINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred HhhHHHHHHHHHHhcCC-EEEEEEeeCCCCcc-hh----hhhhHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 89999999999865443 37788999985421 11 11123445566666 3567899999986643
No 41
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.31 E-value=2.6e-11 Score=110.10 Aligned_cols=178 Identities=17% Similarity=0.231 Sum_probs=92.0
Q ss_pred eEEEEEecCCCCCChH----HHHHHHH--hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNTT----CTINHMS--SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGR 93 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~----~~l~~l~--~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 93 (373)
+|++++||+|.+.... ..++.+. +.++|+|+++||++.. + .|.. ........+.+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~--~--~g~~---------------~~~~~~~~~~~ 61 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEA--W--IGDD---------------DPSPFAREIAA 61 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceecc--c--cccC---------------cCCHHHHHHHH
Confidence 4899999999875432 2344442 3589999999999942 1 1110 00122234556
Q ss_pred HHhhhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHH
Q 017367 94 FMQNLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWL 172 (373)
Q Consensus 94 ~l~~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL 172 (373)
.++.+. .++|+++++||||.... ..+.+...+.. . .....+++++.+++..-..... .....++++
T Consensus 62 ~l~~l~~~g~~v~~v~GNHD~~~~------~~~~~~~g~~~-----l-~~~~~~~~~g~~i~l~HGd~~~-~~d~~y~~~ 128 (241)
T PRK05340 62 ALKALSDSGVPCYFMHGNRDFLLG------KRFAKAAGMTL-----L-PDPSVIDLYGQRVLLLHGDTLC-TDDKAYQRF 128 (241)
T ss_pred HHHHHHHcCCeEEEEeCCCchhhh------HHHHHhCCCEE-----e-CCcEEEEECCEEEEEECCcccc-cCCHHHHHH
Confidence 666664 35899999999997421 11222211100 0 1134567788887777543221 122333333
Q ss_pred HHHHhhccCCCCCeEEEEeCCCCcCCC---------------C-CCccchHHHHHHHHHHHHHcCccEEEeccccceee
Q 017367 173 EKDLANVDRSVTPWLVATWHPPWYSSY---------------S-SHYREAECMRVEMEALLYSYGVDIVFNGHVHAYER 235 (373)
Q Consensus 173 ~~~L~~~~~~~~~~iIv~~H~P~~~~~---------------~-~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r 235 (373)
.+.+... +.+...|.+++... . ....-.....+.+.+++++++++++++||+|.-..
T Consensus 129 r~~~r~~------~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 129 RRKVRNP------WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHhCH------HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 3333221 11111111111000 0 00000000124677888999999999999998544
No 42
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=99.30 E-value=1.9e-11 Score=105.67 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=32.0
Q ss_pred EEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 188 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 188 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
|++.|.|+..... ..+..++.+++++++|+||.|.+....
T Consensus 112 i~lsH~P~~~~~~----------~~~~~~~~~~~p~~Ifs~H~H~s~~~~ 151 (195)
T cd08166 112 IMLSHVPLLAEGG----------QALKHVVTDLDPDLIFSAHRHKSSIFM 151 (195)
T ss_pred eeeeccccccccc----------HHHHHHHHhcCceEEEEcCccceeeEE
Confidence 8899999865321 256788889999999999999977653
No 43
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.28 E-value=2.4e-11 Score=102.60 Aligned_cols=57 Identities=19% Similarity=0.114 Sum_probs=37.2
Q ss_pred EEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCc
Q 017367 187 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNL 260 (373)
Q Consensus 187 iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~ 260 (373)
.|++.|.+....... . .. ..++++.+++++++||+|..... ..++++++..|+.|..
T Consensus 77 ~i~v~Hg~~~~~~~~----~----~~-~~~~~~~~~d~vi~GHtH~~~~~--------~~~~~~~inpGs~~~~ 133 (155)
T cd00841 77 RIFLTHGHLYGVKNG----L----DR-LYLAKEGGADVVLYGHTHIPVIE--------KIGGVLLLNPGSLSLP 133 (155)
T ss_pred EEEEECCcccccccc----h----hh-hhhhhhcCCCEEEECcccCCccE--------EECCEEEEeCCCccCc
Confidence 567777765433211 0 11 44566778999999999986543 2357888888887653
No 44
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=99.23 E-value=1.4e-10 Score=96.26 Aligned_cols=189 Identities=18% Similarity=0.215 Sum_probs=99.6
Q ss_pred eEEEEEecCCCCCChHHHH-----------HHHHh------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcc
Q 017367 20 KRIAIVGDLGLTYNTTCTI-----------NHMSS------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 82 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~~~l-----------~~l~~------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~ 82 (373)
+++..++|+|...+..+.| ++|.+ ..-|.|++.|||..+-.. +.+.
T Consensus 1 M~iyaiaDLHLa~~~pKpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l-~ea~---------------- 63 (230)
T COG1768 1 MRIYAIADLHLALGVPKPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRL-EEAE---------------- 63 (230)
T ss_pred CceeeeehhhHhhCCCCceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheec-hhhh----------------
Confidence 4678899999654322111 12221 245899999999975211 1111
Q ss_pred cchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccc---
Q 017367 83 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAY--- 159 (373)
Q Consensus 83 ~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~--- 159 (373)
.=.+++..| .-.-+.+.||||++..... ...+. +|... .. ..-.|.++++.+++.-..
T Consensus 64 -------~Dl~~i~~L--PG~K~m~rGNHDYWw~s~s----kl~n~--lp~~l--~~--~n~~f~l~n~aI~G~RgW~s~ 124 (230)
T COG1768 64 -------EDLRFIGDL--PGTKYMIRGNHDYWWSSIS----KLNNA--LPPIL--FY--LNNGFELLNYAIVGVRGWDSP 124 (230)
T ss_pred -------hhhhhhhcC--CCcEEEEecCCccccchHH----HHHhh--cCchH--hh--hccceeEeeEEEEEeecccCC
Confidence 113444544 3345899999999854211 11111 11100 00 001244555555443222
Q ss_pred -ccCCCC--------hHHHHHHHHHH-hhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecc
Q 017367 160 -ISYDKS--------GHQYKWLEKDL-ANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 229 (373)
Q Consensus 160 -~~~~~~--------~~Q~~WL~~~L-~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH 229 (373)
.++..- ..++..|+..+ ++.+ +...-+|||.|.|+.+..... ..+.+++++++|+.++.||
T Consensus 125 ~~~~e~~te~Deki~~RE~~RLrlsa~a~l~-k~~~~fivM~HYPP~s~~~t~--------~~~sevlee~rv~~~lyGH 195 (230)
T COG1768 125 SFDSEPLTEQDEKIFLREIGRLRLSADAALP-KGVSKFIVMTHYPPFSDDGTP--------GPFSEVLEEGRVSKCLYGH 195 (230)
T ss_pred CCCcCccchhHHHHHHHHHHHHHHHHHHhcc-cCcCeEEEEEecCCCCCCCCC--------cchHHHHhhcceeeEEeee
Confidence 112111 12334444422 2333 333458999999998754322 3466788899999999999
Q ss_pred ccceeeeeecccCccCCCCCEEEEeCC
Q 017367 230 VHAYERSNRVFNYTLDPCGPVHITIGD 256 (373)
Q Consensus 230 ~H~~~r~~p~~~~~~~~~g~~yi~~G~ 256 (373)
.|.-.|-.+-.. +-.|+.|..+.+
T Consensus 196 lHgv~~p~~~~s---~v~Gi~y~Lvaa 219 (230)
T COG1768 196 LHGVPRPNIGFS---NVRGIEYMLVAA 219 (230)
T ss_pred ccCCCCCCCCcc---cccCceEEEEec
Confidence 998766432211 234777766554
No 45
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=99.23 E-value=3.2e-10 Score=98.43 Aligned_cols=189 Identities=18% Similarity=0.272 Sum_probs=112.3
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHH--H
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRF--M 95 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~--l 95 (373)
.+|+++++|+|..... .+.+..+...++|+++++||++|.. .+.. ....+. +
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~----~~~~---------------------~~~~~~~~~ 57 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFH----FGPK---------------------EVAEELNKL 57 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhh----cCch---------------------HHHHhhhHH
Confidence 5899999999987543 4455555556999999999999432 1210 001111 3
Q ss_pred hhh-hcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccc------cCCCChHH
Q 017367 96 QNL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI------SYDKSGHQ 168 (373)
Q Consensus 96 ~~l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~------~~~~~~~Q 168 (373)
+.+ ...+|+++++||-|-. ...... +..... ..+ -+.+++++.|+.+.... ....++++
T Consensus 58 e~l~~~~~~v~avpGNcD~~-----~v~~~l-~~~~~~------v~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~ 123 (226)
T COG2129 58 EALKELGIPVLAVPGNCDPP-----EVIDVL-KNAGVN------VHG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDE 123 (226)
T ss_pred HHHHhcCCeEEEEcCCCChH-----HHHHHH-Hhcccc------ccc--ceEEecCcEEEEecccCCCCCCCccccCHHH
Confidence 444 3589999999998853 111111 111111 011 45778888888865321 11223333
Q ss_pred -HHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccc-hHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCC
Q 017367 169 -YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYRE-AECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDP 246 (373)
Q Consensus 169 -~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~-~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~ 246 (373)
+.-|++.+.++.. +..|+..|.|++.+....... ...-.+.+.+++++.++.+.+|||.|...-.. .-
T Consensus 124 I~s~l~~~v~~~~~---~~~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d-------~i 193 (226)
T COG2129 124 IYSKLKSLVKKADN---PVNILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGID-------KI 193 (226)
T ss_pred HHHHHHHHHhcccC---cceEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccccccc-------cc
Confidence 3444444444431 223889999998765432111 12235788899999999999999999754432 12
Q ss_pred CCCEEEEeCC
Q 017367 247 CGPVHITIGD 256 (373)
Q Consensus 247 ~g~~yi~~G~ 256 (373)
+.++.|..|.
T Consensus 194 G~TivVNPG~ 203 (226)
T COG2129 194 GNTIVVNPGP 203 (226)
T ss_pred CCeEEECCCC
Confidence 3466666555
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.22 E-value=1.1e-10 Score=95.44 Aligned_cols=49 Identities=12% Similarity=0.017 Sum_probs=31.0
Q ss_pred EEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeee
Q 017367 187 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERS 236 (373)
Q Consensus 187 iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~ 236 (373)
.|+++|+|++...... .......+.+.+++.+++++++|+||+|.....
T Consensus 58 ~Ilv~H~pp~~~~~~~-~~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPPAGIGDGE-DFAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCCCcCcCcc-cccccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 3566677765432211 111112467778888999999999999975543
No 47
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.19 E-value=5.4e-10 Score=96.73 Aligned_cols=177 Identities=21% Similarity=0.340 Sum_probs=88.9
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHH--------
Q 017367 19 PKRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD-------- 89 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~-------- 89 (373)
+-|++++||.+..... .+.++.+...++|.|+++||+.-.. . -..+|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~------a-----------------~~~e~~~a~~~~r~ 61 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAE------A-----------------RSDEYERAQEEQRE 61 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TC------H-----------------HHHHHHHHHHTT--
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccc------h-----------------hhhHHHHHhhhccC
Confidence 4689999999865443 3455555567999999999998321 0 012232
Q ss_pred ------------------HHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchh--hhhcccCCCCCCCCCCCcceEEEEeC
Q 017367 90 ------------------YWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFV--AYSSRFAFPSEESGSLSSFYYSFNAG 149 (373)
Q Consensus 90 ------------------~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~ys~~~g 149 (373)
.|.+.+..+ ++|+++||||||... ..|. .|......|.-. .-...+.+.-|
T Consensus 62 p~k~~i~~e~~~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~----~~~lr~a~~~e~v~p~~~---~vH~sf~~~~g 132 (255)
T PF14582_consen 62 PDKSEINEEECYDSEALDKFFRILGEL--GVPVFVVPGNMDAPE----RFFLREAYNAEIVTPHIH---NVHESFFFWKG 132 (255)
T ss_dssp --THHHHHHHHHHHHHHHHHHHHHHCC---SEEEEE--TTS-SH----HHHHHHHHHCCCC-TTEE---E-CTCEEEETT
T ss_pred cchhhhhhhhhhhHHHHHHHHHHHHhc--CCcEEEecCCCCchH----HHHHHHHhccceecccee---eeeeeecccCC
Confidence 444444444 899999999999741 1111 111111112100 00112333345
Q ss_pred CEEEEEEcccccCCC---------ChHHHHHHHHHHhhccCCCCCeEEEEeCCCC-cCCCCCCccchHHHHHHHHHHHHH
Q 017367 150 GIHFIMLGAYISYDK---------SGHQYKWLEKDLANVDRSVTPWLVATWHPPW-YSSYSSHYREAECMRVEMEALLYS 219 (373)
Q Consensus 150 ~~~fi~ldt~~~~~~---------~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~-~~~~~~~~~~~~~~~~~l~~ll~~ 219 (373)
.+.++++..+..... ..-..+|..+.|..++ . .-.|++.|.|+ ...+..+.+ .+.+.+++++
T Consensus 133 ~y~v~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~elk--~-~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~ 204 (255)
T PF14582_consen 133 EYLVAGMGGEITDDQREEEFKLRYPAWEAEYSLKFLRELK--D-YRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKT 204 (255)
T ss_dssp TEEEEEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGCT--S-SEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHH
T ss_pred cEEEEecCccccCCCccccccccchHHHHHHHHHHHHhcc--c-ccEEEEEecCCccCCCccccc-----HHHHHHHHHh
Confidence 588888887532211 1224455556666654 2 23677799998 333222222 2678899999
Q ss_pred cCccEEEeccccceee
Q 017367 220 YGVDIVFNGHVHAYER 235 (373)
Q Consensus 220 ~~v~lvl~GH~H~~~r 235 (373)
++.+++||||.|.-.-
T Consensus 205 ~~P~ivl~Ghihe~~~ 220 (255)
T PF14582_consen 205 YNPDIVLCGHIHESHG 220 (255)
T ss_dssp H--SEEEE-SSS-EE-
T ss_pred cCCcEEEecccccchh
Confidence 9999999999997553
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=99.18 E-value=1.1e-09 Score=98.66 Aligned_cols=183 Identities=15% Similarity=0.205 Sum_probs=96.2
Q ss_pred EEEecCCCCCCh----HHHHHHHHh--CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 23 AIVGDLGLTYNT----TCTINHMSS--NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 23 ~~igD~h~~~~~----~~~l~~l~~--~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
+++||+|.+... ...++.+.+ .+||+|+++||++. .+. +.. ......+.+.+.++
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d--~~~--~~~---------------~~~~~~~~~~~~l~ 62 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFE--AWI--GDD---------------DPSTLARSVAQAIR 62 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceec--ccc--CCC---------------CCCHHHHHHHHHHH
Confidence 689999987532 345555554 37999999999994 221 110 00112234555666
Q ss_pred hhh-cCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCC------------
Q 017367 97 NLV-SKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYD------------ 163 (373)
Q Consensus 97 ~l~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~------------ 163 (373)
.+. .++|+++++||||.... . .+.+...+.. .. ....+..++.+++++-.-....
T Consensus 63 ~L~~~~~~v~~v~GNHD~~~~---~---~~~~~~gi~~-----l~-~~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~ 130 (231)
T TIGR01854 63 QVSDQGVPCYFMHGNRDFLIG---K---RFAREAGMTL-----LP-DPSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKV 130 (231)
T ss_pred HHHHCCCeEEEEcCCCchhhh---H---HHHHHCCCEE-----EC-CCEEEEECCEEEEEEcCccccCCCHHHHHHHHHH
Confidence 664 36899999999997421 1 1111111100 01 1223566666666654321110
Q ss_pred -----------CChHHHHHHHHHHhhccCC---CCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecc
Q 017367 164 -----------KSGHQYKWLEKDLANVDRS---VTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 229 (373)
Q Consensus 164 -----------~~~~Q~~WL~~~L~~~~~~---~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH 229 (373)
.......||.+.+.+..+. ..+ ..++.+. ...+.++++++++++++|||
T Consensus 131 r~~~~~~~~~~l~~~~r~~l~~~~~~~s~~~~~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~i~GH 193 (231)
T TIGR01854 131 HQPWLQRLFLHLPLAVRVKLARKIRAESRADKQMKS-QDIMDVN----------------PAEVAAVMRRYGVDRLIHGH 193 (231)
T ss_pred hCHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCc-chhhCCC----------------HHHHHHHHHHcCCCEEEECC
Confidence 0112234444444432111 111 1111110 14467778888999999999
Q ss_pred ccceeeeeecccCccCCCCCEEEEeCCC
Q 017367 230 VHAYERSNRVFNYTLDPCGPVHITIGDG 257 (373)
Q Consensus 230 ~H~~~r~~p~~~~~~~~~g~~yi~~G~g 257 (373)
+|.-+.. +... +..+..|++.|.-
T Consensus 194 tH~~~~~-~~~~---~~~~~~~~~lgdW 217 (231)
T TIGR01854 194 THRPAIH-PLQA---DGQPATRIVLGDW 217 (231)
T ss_pred ccCccee-eccc---CCCccEEEEECCC
Confidence 9987654 2210 1224578888875
No 49
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=99.17 E-value=3.6e-10 Score=96.89 Aligned_cols=32 Identities=25% Similarity=0.334 Sum_probs=25.4
Q ss_pred EEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 188 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 188 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
|++.|.|.+. ++.+.+++++|+||+|.+-+..
T Consensus 119 i~l~H~p~~~------------------~~~~~~~~~~lsGH~H~~~~~~ 150 (171)
T cd07384 119 ILLTHIPLYR------------------LLDTIKPVLILSGHDHDQCEVV 150 (171)
T ss_pred eeEECCccHH------------------HHhccCceEEEeCcccCCeEEE
Confidence 8899998731 5667789999999999875553
No 50
>PRK09453 phosphodiesterase; Provisional
Probab=99.16 E-value=2.7e-09 Score=92.64 Aligned_cols=75 Identities=20% Similarity=0.344 Sum_probs=47.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+|++++||+|..... +++++.+.+.++|.|+++||++.. +.. ....+.|+ .+...+.++.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~------~~~----------~~~~~~~~--~~~~~~~l~~~ 62 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYH------GPR----------NPLPEGYA--PKKVAELLNAY 62 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEccccccc------CcC----------CCCccccC--HHHHHHHHHhc
Confidence 589999999965332 345555666799999999999942 110 01112222 12333444443
Q ss_pred hcCCCeEEecCCCCcC
Q 017367 99 VSKVPIMVVEGNHEIE 114 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~ 114 (373)
..+++.|.||||..
T Consensus 63 --~~~v~~V~GNhD~~ 76 (182)
T PRK09453 63 --ADKIIAVRGNCDSE 76 (182)
T ss_pred --CCceEEEccCCcch
Confidence 56899999999963
No 51
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=99.15 E-value=4.6e-10 Score=94.80 Aligned_cols=53 Identities=28% Similarity=0.549 Sum_probs=33.2
Q ss_pred HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh-hh--cCCCeEEecCCCCcC
Q 017367 41 MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN-LV--SKVPIMVVEGNHEIE 114 (373)
Q Consensus 41 l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~-l~--~~~P~~~v~GNHD~~ 114 (373)
+.+.+||+|+++||++.. +.. .. ...|..+...+.. +. ...|+++++||||..
T Consensus 34 i~~~~pd~vv~~GDl~~~------~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 34 LWLLQPDVVFVLGDLFDE------GKW--------------ST-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHhcCCCEEEECCCCCCC------Ccc--------------CC-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 345799999999999953 210 00 1334443333333 22 258999999999984
No 52
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=99.11 E-value=2.5e-09 Score=97.68 Aligned_cols=175 Identities=16% Similarity=0.129 Sum_probs=91.3
Q ss_pred eEEEEEecCCCCC-------C---hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHH
Q 017367 20 KRIAIVGDLGLTY-------N---TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 88 (373)
Q Consensus 20 ~r~~~igD~h~~~-------~---~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~ 88 (373)
++|++++|+|... . ....++++.+..+| +++.+||++......+ + ...
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~--------------------~-~~~ 59 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST--------------------A-TKG 59 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh--------------------c-cCC
Confidence 5899999999543 1 13567777777788 7899999995422100 0 001
Q ss_pred HHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCC----------CCCCCcceEEEEeCCEEEEEEc-
Q 017367 89 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE----------SGSLSSFYYSFNAGGIHFIMLG- 157 (373)
Q Consensus 89 ~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~----------~~~~~~~~ys~~~g~~~fi~ld- 157 (373)
....+.+..+ + .-++++||||+... .+.+.........+.-. .......|-.++.+++++-++.
T Consensus 60 ~~~~~~l~~~--g-~d~~~~GNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~ 134 (252)
T cd00845 60 EANIELMNAL--G-YDAVTIGNHEFDYG--LDALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGL 134 (252)
T ss_pred cHHHHHHHhc--C-CCEEeecccccccc--HHHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEe
Confidence 1233444443 3 34577899998532 22333333322222100 0011233556778886654443
Q ss_pred -ccccCC----------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEE
Q 017367 158 -AYISYD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVF 226 (373)
Q Consensus 158 -t~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl 226 (373)
+..... ......+-+++..+.. +.+...+|++.|.+... ...+.+.+ .++|++|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvl 199 (252)
T cd00845 135 TTPDTPTYTPLGWIIGLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDD------------DEELAEEV--PGIDVIL 199 (252)
T ss_pred ccccceeecCCCcccCceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEE
Confidence 321100 0012223333322222 24567899999977642 01121111 4899999
Q ss_pred eccccceee
Q 017367 227 NGHVHAYER 235 (373)
Q Consensus 227 ~GH~H~~~r 235 (373)
+||+|..+.
T Consensus 200 ggH~H~~~~ 208 (252)
T cd00845 200 GGHTHHLLE 208 (252)
T ss_pred cCCcCcccC
Confidence 999998543
No 53
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=99.07 E-value=1.2e-08 Score=98.58 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=30.4
Q ss_pred CeEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccc
Q 017367 19 PKRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYA 58 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y~ 58 (373)
.+||+++||+|++... .++++.+.+.++|+||++||++..
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~ 55 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHE 55 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCC
Confidence 4999999999987421 234444556799999999999953
No 54
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=99.05 E-value=4.1e-09 Score=94.81 Aligned_cols=178 Identities=20% Similarity=0.210 Sum_probs=104.4
Q ss_pred EEEEEecCCCCCChHHHHHHHH----hCCCCEEEEcCccccccccccCCCCCC--ccccCCCCCCCcccchHHHHHHH--
Q 017367 21 RIAIVGDLGLTYNTTCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSD--CYSCSFSKTPIHETYQPRWDYWG-- 92 (373)
Q Consensus 21 r~~~igD~h~~~~~~~~l~~l~----~~~pd~vi~~GDl~y~~~~~~~g~~~~--~~~~~~~~~~~~~~y~~~~~~~~-- 92 (373)
||++.|..+...........+. +.+||++|++||.+|.+.......... ............+.|...+..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5788888776655444444554 679999999999999864211000000 00000001122333443443332
Q ss_pred HHHhhhhcCCCeEEecCCCCcCCCCCC---------c-------chhhhhcccCCCCCCCC--CCCcceEEEEeCCE-EE
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIEAQAGN---------Q-------TFVAYSSRFAFPSEESG--SLSSFYYSFNAGGI-HF 153 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~~~~~~---------~-------~~~~~~~~~~~p~~~~~--~~~~~~ys~~~g~~-~f 153 (373)
..++.+.+.+|++.++.+||+..+.+. . ....|...+..+..... .....|+++.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 235666778999999999999876433 1 11234333333332221 34678999999996 99
Q ss_pred EEEcccccCCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc--CccEEEecccc
Q 017367 154 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY--GVDIVFNGHVH 231 (373)
Q Consensus 154 i~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~--~v~lvl~GH~H 231 (373)
++||+.... ..+.....-++++..++.+. +-.++|||+.|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999998653 12223334466676765554 34588999999
Q ss_pred ceeee
Q 017367 232 AYERS 236 (373)
Q Consensus 232 ~~~r~ 236 (373)
..+..
T Consensus 203 ~~~~~ 207 (228)
T cd07389 203 LAEAS 207 (228)
T ss_pred HHHHh
Confidence 75544
No 55
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=99.01 E-value=6.8e-09 Score=95.11 Aligned_cols=194 Identities=15% Similarity=0.107 Sum_probs=106.0
Q ss_pred eEEEEEecCCCCC-----------ChHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCCCCCCcccchHH
Q 017367 20 KRIAIVGDLGLTY-----------NTTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPR 87 (373)
Q Consensus 20 ~r~~~igD~h~~~-----------~~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~ 87 (373)
++|++++|+|.-. .....++++.+++++ +++.+||++...... . + .+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~-------------------~-~-~~ 59 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS-------------------T-A-TK 59 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch-------------------h-h-cC
Confidence 5899999999311 113456666667788 999999999532110 0 0 00
Q ss_pred HHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCC----------CCCCCcceEEEEeCCEEEEEE-
Q 017367 88 WDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE----------SGSLSSFYYSFNAGGIHFIML- 156 (373)
Q Consensus 88 ~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~----------~~~~~~~~ys~~~g~~~fi~l- 156 (373)
.+...+.++.+ +.. +.++||||+... .+.+....+....|--. ....-..|..++.+++++-++
T Consensus 60 g~~~~~~l~~l--~~d-~~~~GNHefd~g--~~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG 134 (257)
T cd07406 60 GKQMVPVLNAL--GVD-LACFGNHEFDFG--EDQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLG 134 (257)
T ss_pred CccHHHHHHhc--CCc-EEeecccccccC--HHHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEE
Confidence 11234445544 333 668999998532 22333322222211100 001124677788898665544
Q ss_pred -cccccC---C--C----ChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHH-cCccEE
Q 017367 157 -GAYISY---D--K----SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIV 225 (373)
Q Consensus 157 -dt~~~~---~--~----~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lv 225 (373)
.+.... . . -.+-.+.+++.+++..+.+...+|++.|.+... . . ++.++ .++|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d----~---~la~~~~~iD~I 199 (257)
T cd07406 135 LVEEEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------D----K---RLAREVPEIDLI 199 (257)
T ss_pred EecccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------h----H---HHHHhCCCCceE
Confidence 332111 0 0 122334444444444445678899999987521 1 1 23333 379999
Q ss_pred EeccccceeeeeecccCccCCCCCEEEEeCCCCCccc
Q 017367 226 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 262 (373)
Q Consensus 226 l~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~ 262 (373)
|+||.|..+.. ..++++.+-+|.-|...+
T Consensus 200 lgGH~H~~~~~--------~~~~t~vv~~g~~g~~vg 228 (257)
T cd07406 200 LGGHDHEYILV--------QVGGTPIVKSGSDFRTVY 228 (257)
T ss_pred EecccceeEee--------eECCEEEEeCCcCcceEE
Confidence 99999987632 235677777777776554
No 56
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=99.00 E-value=1.2e-08 Score=94.59 Aligned_cols=206 Identities=17% Similarity=0.116 Sum_probs=106.2
Q ss_pred eEEEEEecCCCCCC-----------------hHHHHHHHHhCCCCEEEE-cCccccccccccC--CCCCCccccCCCCCC
Q 017367 20 KRIAIVGDLGLTYN-----------------TTCTINHMSSNEPDLVLL-VGDVTYANLYLTN--GTGSDCYSCSFSKTP 79 (373)
Q Consensus 20 ~r~~~igD~h~~~~-----------------~~~~l~~l~~~~pd~vi~-~GDl~y~~~~~~~--g~~~~~~~~~~~~~~ 79 (373)
++|++++|+|.... ....++++.+.+++.+++ +||++.+.....- +.
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~------------- 67 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKI------------- 67 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhc-------------
Confidence 58999999995421 134566666677888777 9999954321000 00
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCC--------CCCCCcceEEEEeC-C
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEE--------SGSLSSFYYSFNAG-G 150 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~--------~~~~~~~~ys~~~g-~ 150 (373)
+ ........+.|+.+ +.. +.++||||+... .+.+....+....|--. .......|..++.+ +
T Consensus 68 --~--~~~~~~~~~~ln~~--g~d-~~~lGNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g 138 (277)
T cd07410 68 --E--DGDPHPMIAAMNAL--GYD-AGTLGNHEFNYG--LDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVG 138 (277)
T ss_pred --c--cCCCChHHHHHHhc--CCC-EEeecccCcccC--HHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCC
Confidence 0 00001234445555 444 667899998532 22333333333222110 00122356667888 8
Q ss_pred EEEEEEcccccC---------------CCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 151 IHFIMLGAYISY---------------DKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 151 ~~fi~ldt~~~~---------------~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
+++-++.-.... ....+.+++..++|++ .+...+|++.|........... . ......+
T Consensus 139 ~kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~~-~---~~~~~~~ 211 (277)
T cd07410 139 VKVGIIGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEESL-T---GENAAYE 211 (277)
T ss_pred CEEEEEecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCccccc-C---CccHHHH
Confidence 776655432110 0011223444444443 4567899999987654321000 0 1112234
Q ss_pred HHHH-cCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCcc
Q 017367 216 LLYS-YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLE 261 (373)
Q Consensus 216 ll~~-~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~ 261 (373)
+.++ .++|++|+||.|...... ..+++..+-+|.-|...
T Consensus 212 la~~~~~vD~IlgGHsH~~~~~~-------~~~~~~v~q~g~~g~~v 251 (277)
T cd07410 212 LAEEVPGIDAILTGHQHRRFPGP-------TVNGVPVVQPGNWGSHL 251 (277)
T ss_pred HHhcCCCCcEEEeCCCccccccC-------CcCCEEEEcCChhhCEE
Confidence 4444 489999999999754321 12456666666655543
No 57
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=99.00 E-value=3.1e-09 Score=94.69 Aligned_cols=197 Identities=16% Similarity=0.171 Sum_probs=97.1
Q ss_pred EEEecCCCCCCh---HHHHHHHHh----CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 23 AIVGDLGLTYNT---TCTINHMSS----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 23 ~~igD~h~~~~~---~~~l~~l~~----~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
+++||+|.+... ......+.+ .++|.|+++||++. .+...-. ... ......+...+
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d--~~~~~~~------------~~~---~~~~~~~~~l~ 63 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFD--LWFGDDE------------VVP---PAAHEVLAALL 63 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEE--EEecCCC------------CCC---hHHHHHHHHHH
Confidence 479999987543 222333332 48999999999994 2211000 000 11111123444
Q ss_pred hhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHHH
Q 017367 96 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEKD 175 (373)
Q Consensus 96 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~~ 175 (373)
+.+..+.+++.++||||.... ..+........ .......+..++.+++++-.... ........|+...
T Consensus 64 ~~~~~~~~v~~v~GNHD~~~~------~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~~-d~~~~~~~~~~~~ 131 (217)
T cd07398 64 RLADRGTRVYYVPGNHDFLLG------DFFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQF-DTDDRAYQLLRRL 131 (217)
T ss_pred HHHHCCCeEEEECCCchHHHH------hHHHHHcCCEE-----eccceEEEeeCCeEEEEECCCcC-chhHHHHHHHHHH
Confidence 455668999999999998521 11111111000 01111156778888888866432 1223333444332
Q ss_pred HhhccC-----C-CCCe--EEEEeCC----CCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCc
Q 017367 176 LANVDR-----S-VTPW--LVATWHP----PWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYT 243 (373)
Q Consensus 176 L~~~~~-----~-~~~~--iIv~~H~----P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~ 243 (373)
+..... . ..++ .+..... +................+.+.+++++++++++++||+|......
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~------ 205 (217)
T cd07398 132 GRNPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALHE------ 205 (217)
T ss_pred hCcHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeEE------
Confidence 211000 0 0000 0000000 00000000111122345667777888999999999999866543
Q ss_pred cCCCCCEEEEeCC
Q 017367 244 LDPCGPVHITIGD 256 (373)
Q Consensus 244 ~~~~g~~yi~~G~ 256 (373)
.++..|+++|+
T Consensus 206 --~~~~~~~n~G~ 216 (217)
T cd07398 206 --LDGKLYINLGD 216 (217)
T ss_pred --ECCEEEEECCC
Confidence 23678888875
No 58
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.93 E-value=1.2e-08 Score=99.21 Aligned_cols=75 Identities=21% Similarity=0.354 Sum_probs=52.2
Q ss_pred eEEEEEecCCCCC---Ch-----------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccch
Q 017367 20 KRIAIVGDLGLTY---NT-----------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQ 85 (373)
Q Consensus 20 ~r~~~igD~h~~~---~~-----------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~ 85 (373)
+||+++||+|++. +. ..+++.+.+.++||||++||+... .. |..
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~------~~------------Ps~---- 58 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDT------NN------------PSP---- 58 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccC------CC------------CCH----
Confidence 5999999999982 11 234556667899999999999953 11 101
Q ss_pred HHHHHHHHHHhhh-hcCCCeEEecCCCCcCCC
Q 017367 86 PRWDYWGRFMQNL-VSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 86 ~~~~~~~~~l~~l-~~~~P~~~v~GNHD~~~~ 116 (373)
.....+.+.++.+ ..++|++++.||||....
T Consensus 59 ~a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~~ 90 (390)
T COG0420 59 RALKLFLEALRRLKDAGIPVVVIAGNHDSPSR 90 (390)
T ss_pred HHHHHHHHHHHHhccCCCcEEEecCCCCchhc
Confidence 1223456666666 358999999999998643
No 59
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.89 E-value=1.3e-07 Score=87.01 Aligned_cols=172 Identities=16% Similarity=0.124 Sum_probs=88.7
Q ss_pred eEEEEEecCCCCCC-----------------------hHHHHHHHHhC-CCCEE-EEcCccccccccccCCCCCCccccC
Q 017367 20 KRIAIVGDLGLTYN-----------------------TTCTINHMSSN-EPDLV-LLVGDVTYANLYLTNGTGSDCYSCS 74 (373)
Q Consensus 20 ~r~~~igD~h~~~~-----------------------~~~~l~~l~~~-~pd~v-i~~GDl~y~~~~~~~g~~~~~~~~~ 74 (373)
++|++++|+|.... ....++++.+. .+|.+ +.+||++......
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~------------ 68 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEA------------ 68 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHH------------
Confidence 47888899885310 12345666666 89977 5699999542110
Q ss_pred CCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC--------CCCCcceEEE
Q 017367 75 FSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES--------GSLSSFYYSF 146 (373)
Q Consensus 75 ~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~--------~~~~~~~ys~ 146 (373)
+........+.|.. +++.++.||||+... ...+....+.+..|--.. ......|..+
T Consensus 69 ---------~~~~g~~~~~~l~~----~g~da~~GNHefd~g--~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~ 133 (264)
T cd07411 69 ---------LYTRGQAMVDALNA----LGVDAMVGHWEFTYG--PERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIK 133 (264)
T ss_pred ---------hhcCChhHHHHHHh----hCCeEEecccccccC--HHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEE
Confidence 00011223333433 455555599998632 233333333333221100 0111235566
Q ss_pred EeCCEEE--EEEcccccCC--C--------ChHHHHHHHHHHhhcc-CCCCCeEEEEeCCCCcCCCCCCccchHHHHHHH
Q 017367 147 NAGGIHF--IMLGAYISYD--K--------SGHQYKWLEKDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEM 213 (373)
Q Consensus 147 ~~g~~~f--i~ldt~~~~~--~--------~~~Q~~WL~~~L~~~~-~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l 213 (373)
+.+++++ |.+.+..... . .....+.+++.+.+.. ..+...+|++.|.+... . .
T Consensus 134 ~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~--------~----~-- 199 (264)
T cd07411 134 EVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV--------D----V-- 199 (264)
T ss_pred EECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh--------h----H--
Confidence 7888655 4444321100 0 1223444554433332 24567899999977531 0 1
Q ss_pred HHHHHH-cCccEEEeccccce
Q 017367 214 EALLYS-YGVDIVFNGHVHAY 233 (373)
Q Consensus 214 ~~ll~~-~~v~lvl~GH~H~~ 233 (373)
++.++ .++|++|+||.|..
T Consensus 200 -~la~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 200 -ELAERVPGIDVILSGHTHER 219 (264)
T ss_pred -HHHhcCCCCcEEEeCccccc
Confidence 22233 37999999999974
No 60
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.89 E-value=6.5e-08 Score=88.31 Aligned_cols=189 Identities=17% Similarity=0.221 Sum_probs=100.7
Q ss_pred EEEEecCCCCCChH-HHHHHHHh---CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 22 IAIVGDLGLTYNTT-CTINHMSS---NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 22 ~~~igD~h~~~~~~-~~l~~l~~---~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
|++.||.|...... +.++.+++ .++|+||++||+.-. + +....++ -.....|. .+..|.+.++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~--~--~~~d~~~-------~~~p~k~~-~~~~f~~~~~g 68 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAV--R--NEADLKC-------MAVPPKYR-KMGDFYKYYSG 68 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCc--C--Ccchhhh-------hccchhhh-hhhhHHHHhcC
Confidence 58999999754322 22333332 479999999999631 1 1110000 01112221 23445555555
Q ss_pred h-hcCCCeEEecCCCCcCCCCCCcchhhhh-cccCCCCCCCCCCCcce-----EEEEeCCEEEEEEccccc---C-----
Q 017367 98 L-VSKVPIMVVEGNHEIEAQAGNQTFVAYS-SRFAFPSEESGSLSSFY-----YSFNAGGIHFIMLGAYIS---Y----- 162 (373)
Q Consensus 98 l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~-----ys~~~g~~~fi~ldt~~~---~----- 162 (373)
+ ...+|+++|.||||... .+.... ..+. ..+.+ ..++++|++|..|..... +
T Consensus 69 ~~~~p~~t~fi~GNHE~~~-----~l~~l~~gg~v--------~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~ 135 (262)
T cd00844 69 EKKAPILTIFIGGNHEASN-----YLWELPYGGWV--------APNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHF 135 (262)
T ss_pred CccCCeeEEEECCCCCCHH-----HHHhhcCCCee--------cCcEEEecCCCEEEECCeEEEEecccccccccccccc
Confidence 4 34778899999999631 111110 0010 12233 246689999999986321 1
Q ss_pred ---CCChHHHHHHH-------HHHhhccCCCCCeEEEEeCCCCcCCCCCCccc---------------hHHHHHHHHHHH
Q 017367 163 ---DKSGHQYKWLE-------KDLANVDRSVTPWLVATWHPPWYSSYSSHYRE---------------AECMRVEMEALL 217 (373)
Q Consensus 163 ---~~~~~Q~~WL~-------~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~ll 217 (373)
.....++..+- +.|.... .+.-|+++|.|+.......... ...-...+.+++
T Consensus 136 ~~~~~t~~~~rs~y~~r~~~~~kl~~~~---~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll 212 (262)
T cd00844 136 ERPPYSEDTKRSAYHVRNIEVFKLKQLK---QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELL 212 (262)
T ss_pred cCCCCCHHHHHHhhhhhHHHHHHHHhcC---CCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHH
Confidence 11233433211 1122221 2346889999886643211100 011235677899
Q ss_pred HHcCccEEEeccccc-eeeeee
Q 017367 218 YSYGVDIVFNGHVHA-YERSNR 238 (373)
Q Consensus 218 ~~~~v~lvl~GH~H~-~~r~~p 238 (373)
++.++.++|+||.|. |++..|
T Consensus 213 ~~lkPryhf~gH~H~~f~~~~~ 234 (262)
T cd00844 213 KHLKPRYWFSAHLHVKFAALVP 234 (262)
T ss_pred HHhCCCEEEEecCCcccceecC
Confidence 999999999999997 555543
No 61
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.88 E-value=4.6e-09 Score=90.75 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=24.1
Q ss_pred EEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 188 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 188 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
|++.|.|.+. +..+.+++++||||+|.-++..
T Consensus 129 ilL~H~P~~~------------------~~~~~~~dl~lSGHtHgGqi~~ 160 (193)
T cd08164 129 ILLTHVPLYK------------------IFLEGKPGLILTGHDHEGCDYQ 160 (193)
T ss_pred EEEEccccee------------------ccccCCCCEEEeCccCCCeEEE
Confidence 8889999754 1123478999999999877653
No 62
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.88 E-value=1.3e-07 Score=80.49 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=29.7
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
+||+++||+|..... ....+.....++|+|||+||++.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~ 40 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTS 40 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCC
Confidence 699999999986532 34444455679999999999995
No 63
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.86 E-value=8.4e-08 Score=91.46 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=47.1
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 20 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
+||+++||+|.+... .++++.+.+.++|+||++||++... ... ...
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~----~~~-----------------~~~ 59 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVR----KAI-----------------TQN 59 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCC----CCC-----------------CHH
Confidence 589999999987421 1234444568999999999999421 000 011
Q ss_pred HHHHHHH-HHhhh-hcCCCeEEecCCCCcC
Q 017367 87 RWDYWGR-FMQNL-VSKVPIMVVEGNHEIE 114 (373)
Q Consensus 87 ~~~~~~~-~l~~l-~~~~P~~~v~GNHD~~ 114 (373)
....+.+ +++.+ ..++|+++++||||..
T Consensus 60 ~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 60 TMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 1222222 23444 2479999999999974
No 64
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.82 E-value=7.6e-08 Score=88.21 Aligned_cols=202 Identities=18% Similarity=0.149 Sum_probs=102.1
Q ss_pred eEEEEEecCCCCCC--------h---HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHH
Q 017367 20 KRIAIVGDLGLTYN--------T---TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRW 88 (373)
Q Consensus 20 ~r~~~igD~h~~~~--------~---~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~ 88 (373)
++|++++|+|.... . ...++++.+.+.++++.+||++.+.... .. ...
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~-------------------~~--~~g 59 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPIS-------------------DL--DKG 59 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhh-------------------hh--cCC
Confidence 58999999996421 1 2345555544678999999999532110 00 001
Q ss_pred HHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-------C-CCCcceEEEEeC-CEEE--EEEc
Q 017367 89 DYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAG-GIHF--IMLG 157 (373)
Q Consensus 89 ~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-------~-~~~~~~ys~~~g-~~~f--i~ld 157 (373)
....+.|..+ +..+ .++||||+... .+.+..+.+.+..|--.. + ..-..|--++.+ ++++ +++-
T Consensus 60 ~~~~~~ln~~--g~d~-~~~GNHefd~G--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~ 134 (257)
T cd07408 60 ETIIKIMNAV--GYDA-VTPGNHEFDYG--LDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLT 134 (257)
T ss_pred cHHHHHHHhc--CCcE-EccccccccCC--HHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeec
Confidence 1233444444 5555 56899998532 233333333333332110 0 011234455677 7554 4444
Q ss_pred cccc-C--CC-------ChHHHHHHHHH-HhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHH-cCccEE
Q 017367 158 AYIS-Y--DK-------SGHQYKWLEKD-LANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS-YGVDIV 225 (373)
Q Consensus 158 t~~~-~--~~-------~~~Q~~WL~~~-L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~-~~v~lv 225 (373)
+... . .. -.+-.+-+++. ....++.+...+|++.|.+....... . . ... +.++ .++|++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~-~----~~~---la~~~~giDvI 205 (257)
T cd07408 135 TPETATKTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-W-T----STE---LAANVTGIDLI 205 (257)
T ss_pred CcCcccccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-c-c----HHH---HHHhCCCceEE
Confidence 4210 0 00 01122334333 23333346778999999887543211 1 0 112 2223 379999
Q ss_pred EeccccceeeeeecccCccCCCCCEEEEeCCCCCcc
Q 017367 226 FNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLE 261 (373)
Q Consensus 226 l~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~ 261 (373)
|.||.|....... ...+++..+.+|.-|...
T Consensus 206 igGH~H~~~~~~~-----~~~~~~~ivq~g~~g~~v 236 (257)
T cd07408 206 IDGHSHTTIEIGK-----KDGNNVLLTQTGAYLANI 236 (257)
T ss_pred EeCCCcccccCcc-----cccCCeEEEcCChHHceE
Confidence 9999998654310 012455556566555543
No 65
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.82 E-value=1.3e-08 Score=89.36 Aligned_cols=191 Identities=15% Similarity=0.181 Sum_probs=96.5
Q ss_pred EEEecCCCCCChHH----HHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 23 AIVGDLGLTYNTTC----TINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 23 ~~igD~h~~~~~~~----~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
++|||+|.+..... .++-|... +.|.+.++||++. .|. |. +.+.+..++....+.
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~--g~---------------~~~~~~~~~V~~~l~ 61 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWI--GD---------------DEPPQLHRQVAQKLL 61 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhh--cC---------------CcccHHHHHHHHHHH
Confidence 36999999844322 23333333 5599999999993 332 11 112223344444444
Q ss_pred hh-hcCCCeEEecCCCCcCCCCCCcchhhhhcccC-CCCCCCCCCCcceEEEEeCCEEEEEEcccccCCCChHHHHHHHH
Q 017367 97 NL-VSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFA-FPSEESGSLSSFYYSFNAGGIHFIMLGAYISYDKSGHQYKWLEK 174 (373)
Q Consensus 97 ~l-~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~~~~~~~Q~~WL~~ 174 (373)
.+ .++.|+|+++||||... ...+...+. +- .-+.+-..+..|-+++++-.-. +.....++.|+..
T Consensus 62 ~~a~~G~~v~~i~GN~Dfll------~~~f~~~~g~~~------l~~~~~~~~l~g~~~Ll~HGD~-f~t~~~~y~~~r~ 128 (237)
T COG2908 62 RLARKGTRVYYIHGNHDFLL------GKRFAQEAGGMT------LLPDPIVLDLYGKRILLAHGDT-FCTDDRAYQWFRY 128 (237)
T ss_pred HHHhcCCeEEEecCchHHHH------HHHHHhhcCceE------EcCcceeeeecCcEEEEEeCCc-ccchHHHHHHHHH
Confidence 44 56799999999999642 112222221 10 1112223444455555553321 1122333444332
Q ss_pred HHhhccCCCCCeEEEEeCCCCc----------CCC--CCC-----ccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 175 DLANVDRSVTPWLVATWHPPWY----------SSY--SSH-----YREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 175 ~L~~~~~~~~~~iIv~~H~P~~----------~~~--~~~-----~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
....+-. ..++.+.|+. ... ... ..-.+.+.+...+.+++++|+.+++||+|.-...
T Consensus 129 ~~~~~~~-----~~lflnl~l~~R~ri~~k~r~~s~~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~- 202 (237)
T COG2908 129 KVHWAWL-----QLLFLNLPLRVRRRIAYKIRSLSSWAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIH- 202 (237)
T ss_pred HcccHHH-----HHHHHHhHHHHHHHHHHHHHHhhHHhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhc-
Confidence 2211100 0011111110 000 000 0001123456778888999999999999985544
Q ss_pred ecccCccCCCCCEEEEeCCCC
Q 017367 238 RVFNYTLDPCGPVHITIGDGG 258 (373)
Q Consensus 238 p~~~~~~~~~g~~yi~~G~gG 258 (373)
+-.+..|++.|+-.
T Consensus 203 -------~i~~~~yi~lGdW~ 216 (237)
T COG2908 203 -------NIPGITYINLGDWV 216 (237)
T ss_pred -------cCCCceEEecCcch
Confidence 34569999999865
No 66
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.79 E-value=2e-07 Score=86.83 Aligned_cols=211 Identities=14% Similarity=0.151 Sum_probs=105.9
Q ss_pred eEEEEEecCCCCCC---------------hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCCCCCCccc
Q 017367 20 KRIAIVGDLGLTYN---------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 83 (373)
Q Consensus 20 ~r~~~igD~h~~~~---------------~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~ 83 (373)
++|++++|+|.... ....++++.+..++ ++|.+||++....+.+.-
T Consensus 1 i~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~------------------ 62 (288)
T cd07412 1 VQILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESAL------------------ 62 (288)
T ss_pred CeEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhc------------------
Confidence 48999999995421 12345555555554 899999999543211000
Q ss_pred chHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhc------------------ccCC-----CCCC-CCCC
Q 017367 84 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS------------------RFAF-----PSEE-SGSL 139 (373)
Q Consensus 84 y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~------------------~~~~-----p~~~-~~~~ 139 (373)
+ ......+.|..+ +.- +.++||||+... ...+..+.+ .|.+ .... ....
T Consensus 63 ~--~g~~~~~~~n~~--g~D-a~t~GNHefd~G--~~~l~~~~~~~~~~~~~~~~~~~~~~a~fp~l~aNv~~~~~~~~~ 135 (288)
T cd07412 63 L--QDEPTIEALNAM--GVD-ASAVGNHEFDEG--YAELLRRINGGCHPTTGCQAGYPFPGANFPYLAANVYDKGTGTPA 135 (288)
T ss_pred c--cCCcHHHHHHhh--CCe-eeeecccccccC--HHHHHHHHhccCCccccccccccCcCCCCCEEEEeEEecCCCCcc
Confidence 0 001233444444 444 477899998632 112222211 1111 0000 0011
Q ss_pred CcceEEEEeCCEEEEEEcc--ccc-C--C-------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchH
Q 017367 140 SSFYYSFNAGGIHFIMLGA--YIS-Y--D-------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAE 207 (373)
Q Consensus 140 ~~~~ys~~~g~~~fi~ldt--~~~-~--~-------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~ 207 (373)
-..|.-++.+++++-++.- ... . . .-..-.+-+++.++++++.+.+.+|++.|........... ..
T Consensus 136 ~~py~i~~~~G~kIgviGl~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~ 213 (288)
T cd07412 136 LPPYTIKDVGGVKVGFIGAVTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CS 213 (288)
T ss_pred cCCEEEEEECCEEEEEEeecCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--cc
Confidence 1245557788866544432 110 0 0 0122334455555555434677899999977643221100 00
Q ss_pred HHHHHHHHHHHH--cCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCccc
Q 017367 208 CMRVEMEALLYS--YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEK 262 (373)
Q Consensus 208 ~~~~~l~~ll~~--~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~ 262 (373)
.......+++.+ .++|++|+||+|..... +. ...++++.+.+|.-|...+
T Consensus 214 ~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~~-~~----~~~~~~~v~q~g~~g~~vg 265 (288)
T cd07412 214 AASGPIADIVNRLDPDVDVVFAGHTHQAYNC-TV----PAGNPRLVTQAGSYGKAVA 265 (288)
T ss_pred ccChhHHHHHhhcCCCCCEEEeCccCccccc-cc----cCcCCEEEEecChhhceeE
Confidence 001122334444 37999999999986542 10 0235777788887776544
No 67
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.73 E-value=4.2e-07 Score=84.43 Aligned_cols=174 Identities=17% Similarity=0.254 Sum_probs=93.6
Q ss_pred eEEEEEecCCCCCC----------------------hHHHHHHHHhCCCC-EEEEcCccccccccccCCCCCCccccCCC
Q 017367 20 KRIAIVGDLGLTYN----------------------TTCTINHMSSNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFS 76 (373)
Q Consensus 20 ~r~~~igD~h~~~~----------------------~~~~l~~l~~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~ 76 (373)
++|++.+|+|.... ....++++.+..++ +++.+||++.+....
T Consensus 1 l~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~-------------- 66 (281)
T cd07409 1 LTILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWY-------------- 66 (281)
T ss_pred CEEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchh--------------
Confidence 57899999995310 12345666556677 566699999543210
Q ss_pred CCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-----------CCCCcceEE
Q 017367 77 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-----------GSLSSFYYS 145 (373)
Q Consensus 77 ~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-----------~~~~~~~ys 145 (373)
..+ ..+...+.|..+ +.. +.++||||+... .+.+..+.+....|.-.. ...-..|..
T Consensus 67 -----~~~--~g~~~~~~ln~~--g~D-~~~lGNHefd~G--~~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i 134 (281)
T cd07409 67 -----TLY--KGNADAEFMNLL--GYD-AMTLGNHEFDDG--VEGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTI 134 (281)
T ss_pred -----hhc--CChHHHHHHHhc--CCC-EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEE
Confidence 000 112234455554 555 456799998643 223333333332221110 001134556
Q ss_pred EEeCCEEEEEE--cccccC---C--C---ChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 146 FNAGGIHFIML--GAYISY---D--K---SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 146 ~~~g~~~fi~l--dt~~~~---~--~---~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
++.+++++-++ -+.... . . -.+..+.+++.++++++.+...+|++.|..... . . +
T Consensus 135 ~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~--------d----~---~ 199 (281)
T cd07409 135 LTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV--------D----K---E 199 (281)
T ss_pred EEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh--------H----H---H
Confidence 78888665444 332110 0 0 123445566766666555677899999976421 1 1 2
Q ss_pred HHHH-cCccEEEecccccee
Q 017367 216 LLYS-YGVDIVFNGHVHAYE 234 (373)
Q Consensus 216 ll~~-~~v~lvl~GH~H~~~ 234 (373)
+.++ .++|++|+||+|...
T Consensus 200 la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 200 IARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred HHHcCCCCcEEEeCCcCccc
Confidence 3333 379999999999864
No 68
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.65 E-value=4.8e-07 Score=90.45 Aligned_cols=201 Identities=18% Similarity=0.217 Sum_probs=102.6
Q ss_pred CCeEEEEEecCCCCCCh------HHHHHHHH---------hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcc
Q 017367 18 YPKRIAIVGDLGLTYNT------TCTINHMS---------SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHE 82 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~------~~~l~~l~---------~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~ 82 (373)
...+++++||+|.+... ...++.+. +.+++.||++||++...+... +... +....+
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p-~~~~--------~~~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYP-GQEE--------ELEIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCc-cchh--------hccchh
Confidence 46899999999987531 23445555 567999999999994311000 0000 000011
Q ss_pred cchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCc--chhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccc
Q 017367 83 TYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ--TFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI 160 (373)
Q Consensus 83 ~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~ 160 (373)
.+ .+++.+.++++.+...+|+++++||||.......+ ....+...+.... .....+ -+.+.+++.++++.....
T Consensus 313 ~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~~~--v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 313 IY-EQYEAAAEYLKQIPEDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPEHN--VTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEEecCCCcchhhccCCCCccHHHHHhcCcCC--eEEecC-CeEEEECCEEEEEECCCC
Confidence 11 22445667777777789999999999975321110 1111211121100 001122 245778888888775432
Q ss_pred -----cCC---CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccc
Q 017367 161 -----SYD---KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 161 -----~~~---~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+- ....-.+.|++.|..-. -.| ..-.+.|.+.... .. +.-..-.+++++||.|.
T Consensus 389 idDl~~~i~~~s~~~p~~~m~~~l~~rH--laP--t~p~~~~~~p~~~-D~------------lvi~~~Pdv~~~GH~H~ 451 (504)
T PRK04036 389 IDDVISLIPGASYEKPGKAMEELLKRRH--LAP--IYGGRTPIAPEKE-DY------------LVIDEVPDIFHTGHVHI 451 (504)
T ss_pred HHHHHhhcccccccCHHHHHHHHHHhcc--cCC--CCCCCEEeCcCCC-CC------------EEEecCCCEEEeCCCCc
Confidence 010 11223455666665311 001 0000122222110 00 11112369999999998
Q ss_pred eeeeeecccCccCCCCCEEEEeCC
Q 017367 233 YERSNRVFNYTLDPCGPVHITIGD 256 (373)
Q Consensus 233 ~~r~~p~~~~~~~~~g~~yi~~G~ 256 (373)
+.... -+|+.+|.+|+
T Consensus 452 ~~~~~--------~~g~~~IN~gs 467 (504)
T PRK04036 452 NGYGK--------YRGVLLINSGT 467 (504)
T ss_pred cceEE--------ECCEEEEECCc
Confidence 76542 35788888776
No 69
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.63 E-value=1.4e-06 Score=95.85 Aligned_cols=184 Identities=17% Similarity=0.194 Sum_probs=96.6
Q ss_pred CCeEEEEEecCCCCCC-h---HHHHHHHHhCCCCEEEE-cCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHH
Q 017367 18 YPKRIAIVGDLGLTYN-T---TCTINHMSSNEPDLVLL-VGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 92 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-~---~~~l~~l~~~~pd~vi~-~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~ 92 (373)
..++|++++|+|.... . ...++++.+.+++.|++ +||++.+.... .. .......
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~-------------------~~--~~g~~~~ 717 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYS-------------------NL--LKGLPVL 717 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchh-------------------hh--cCChHHH
Confidence 4699999999996532 2 34566666778888766 99999532110 00 0112233
Q ss_pred HHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcc--------------cCC-------CCC-CCCCCCcceEEEEeCC
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSR--------------FAF-------PSE-ESGSLSSFYYSFNAGG 150 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~--------------~~~-------p~~-~~~~~~~~~ys~~~g~ 150 (373)
+.|..+ +. -+.++||||+.... +.+..+... |.+ ... .....-..|.-++.++
T Consensus 718 ~~ln~l--g~-d~~~~GNHEfd~g~--~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G 792 (1163)
T PRK09419 718 KMMKEM--GY-DASTFGNHEFDWGP--DVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNG 792 (1163)
T ss_pred HHHhCc--CC-CEEEecccccccCh--HHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECC
Confidence 444444 22 35699999986431 222222211 110 000 0001113456678888
Q ss_pred EEE--EEEcccc-cC--CC-------ChHHHHHHHHHHhhcc-CCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHH
Q 017367 151 IHF--IMLGAYI-SY--DK-------SGHQYKWLEKDLANVD-RSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALL 217 (373)
Q Consensus 151 ~~f--i~ldt~~-~~--~~-------~~~Q~~WL~~~L~~~~-~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll 217 (373)
+++ |++-+.. .. .. -.+..+.+++..++.+ ..+...+|++.|.......... .....++.
T Consensus 793 ~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~~-------~~~~~~lA 865 (1163)
T PRK09419 793 KKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTTG-------EITGLELA 865 (1163)
T ss_pred EEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCcccccccc-------ccHHHHHH
Confidence 665 4443321 00 00 1123334444444443 2467789999998764321110 11233444
Q ss_pred HHc-CccEEEecccccee
Q 017367 218 YSY-GVDIVFNGHVHAYE 234 (373)
Q Consensus 218 ~~~-~v~lvl~GH~H~~~ 234 (373)
++. +||++|.||+|...
T Consensus 866 ~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 866 KKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred HhCCCCCEEEeCCCCccc
Confidence 444 79999999999754
No 70
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=98.60 E-value=1.1e-06 Score=79.74 Aligned_cols=195 Identities=16% Similarity=0.185 Sum_probs=95.4
Q ss_pred EEEecCCCCCCh------HHHHHHHHhC-----CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHH
Q 017367 23 AIVGDLGLTYNT------TCTINHMSSN-----EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYW 91 (373)
Q Consensus 23 ~~igD~h~~~~~------~~~l~~l~~~-----~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~ 91 (373)
+++||+|.+... ...++.|... ++|.||++||++...... .+... .-..+.....+..+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~-~~~~~---------~~~~~~~~~~~~~~ 71 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVY-PGQEE---------ELEILDIYEQYEEA 71 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccC-Ccchh---------hhhhhhHHHHHHHH
Confidence 689999976432 1233444333 569999999999531000 00000 00000112234556
Q ss_pred HHHHhhhhcCCCeEEecCCCCcCCCCCC--cchhhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEcccc-c----C--
Q 017367 92 GRFMQNLVSKVPIMVVEGNHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYI-S----Y-- 162 (373)
Q Consensus 92 ~~~l~~l~~~~P~~~v~GNHD~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~-~----~-- 162 (373)
.++++.+...+|+++++||||....... .....+.+.+. +.+ .....+. +.+.+++.+|++..... . .
T Consensus 72 ~~~l~~L~~~~~v~~ipGNHD~~~~~~pq~~l~~~l~~~~~-~~~-v~~l~Np-~~~~~~g~~i~~~~G~~~~d~~~~~~ 148 (243)
T cd07386 72 AEYLSDVPSHIKIIIIPGNHDAVRQAEPQPALPEEIRKLFL-PGN-VEFVSNP-ALVKIHGVDVLIYHGRSIDDVVKLIP 148 (243)
T ss_pred HHHHHhcccCCeEEEeCCCCCcccccCCCCCccHHHHhhcC-CCc-eEEeCCC-CEEEECCEEEEEECCCCHHHHHHhCC
Confidence 7778888778999999999998532111 11122222211 000 0011222 35778888887653211 0 0
Q ss_pred -CCChHHHHHHHHHHhhccCCC-CCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecc
Q 017367 163 -DKSGHQYKWLEKDLANVDRSV-TPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVF 240 (373)
Q Consensus 163 -~~~~~Q~~WL~~~L~~~~~~~-~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~ 240 (373)
.....-.++++..|....-.. .+-. .|.+... ... +......+++|+||.|.+....
T Consensus 149 ~~~~~~~~~~~~~~l~~~hl~P~~~~~-----~~~~~~~-~~~------------~~~~~~p~vii~Gh~h~~~~~~--- 207 (243)
T cd07386 149 GLSYDKPGKAMEELLKRRHLAPIYGGR-----TPIAPEP-EDY------------LVIDEVPDILHTGHVHVYGVGV--- 207 (243)
T ss_pred CCCcccHHHHHHHHHhhcccCCCCCCC-----EeeCCCC-CCC------------EEecCCCCEEEECCCCchHhEE---
Confidence 111223455665555421110 1100 0111100 000 1112367899999999876552
Q ss_pred cCccCCCCCEEEEeCC
Q 017367 241 NYTLDPCGPVHITIGD 256 (373)
Q Consensus 241 ~~~~~~~g~~yi~~G~ 256 (373)
-++++++..|+
T Consensus 208 -----~~~~~~vn~Gs 218 (243)
T cd07386 208 -----YRGVLLVNSGT 218 (243)
T ss_pred -----ECCEEEEECCC
Confidence 24788887776
No 71
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=98.59 E-value=3.3e-06 Score=78.19 Aligned_cols=205 Identities=15% Similarity=0.164 Sum_probs=103.0
Q ss_pred CeEEEEEecCCCCCC--------------hHHHHHHHH----hCCCC-EEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 19 PKRIAIVGDLGLTYN--------------TTCTINHMS----SNEPD-LVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 19 ~~r~~~igD~h~~~~--------------~~~~l~~l~----~~~pd-~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
+++|++.+|+|.... ..+.++++. +..++ +++.+||++.+..+
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~------------------ 66 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGL------------------ 66 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeec------------------
Confidence 599999999995421 122333332 23555 67789999965322
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCC-cchhhhhcccCCCCCCC---------C--CCCcceEEEE
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGN-QTFVAYSSRFAFPSEES---------G--SLSSFYYSFN 147 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~-~~~~~~~~~~~~p~~~~---------~--~~~~~~ys~~ 147 (373)
...+........++|..+ +.- +.++||||+...... ..+..+.+....|--.. . .....|..++
T Consensus 67 -~~~~~~~g~~~~~~mN~m--gyD-a~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~ 142 (282)
T cd07407 67 -SDASPPPGSYSNPIFRMM--PYD-LLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFT 142 (282)
T ss_pred -eeeecCCChHHHHHHHhc--CCc-EEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEE
Confidence 111101123345555555 222 588999999532111 11111222111121000 0 1112355567
Q ss_pred eC-CEEE--EEEcccccC-------CCChH--HHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 148 AG-GIHF--IMLGAYISY-------DKSGH--QYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 148 ~g-~~~f--i~ldt~~~~-------~~~~~--Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
.+ ++++ |++-+.... ....+ +.+|+.+.|++ .+...+|++.|....... .. .+....
T Consensus 143 ~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~~---~~~~~~ 211 (282)
T cd07407 143 TKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----EF---KVLHDA 211 (282)
T ss_pred cCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----cH---HHHHHH
Confidence 76 7664 444332110 01112 22477777763 356789999998764321 11 111122
Q ss_pred HHHHc-Ccc-EEEeccccceeeeeecccCccCCCCCEEEEeCCCCCcccc
Q 017367 216 LLYSY-GVD-IVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKM 263 (373)
Q Consensus 216 ll~~~-~v~-lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~ 263 (373)
+.++. +++ ++|.||+|..... + ..+++..+-.|.-|...+.
T Consensus 212 la~~~~~id~~Ii~GHsH~~~~~-~------~~~~~~ivq~G~~g~~lg~ 254 (282)
T cd07407 212 IRKIFPDTPIQFLGGHSHVRDFT-Q------YDSSSTGLESGRYLETVGW 254 (282)
T ss_pred HHHhCCCCCEEEEeCCcccccce-e------ccCcEEEEeccchhhceEE
Confidence 33333 567 7999999975332 1 1256666667776665543
No 72
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=98.57 E-value=4.6e-06 Score=77.55 Aligned_cols=187 Identities=17% Similarity=0.142 Sum_probs=90.9
Q ss_pred eEEEEEecCCCCCC-----------hHHHHHHHHhC-----CCCEEEEcCccccccccccCCCCCCccccCCCCCCCccc
Q 017367 20 KRIAIVGDLGLTYN-----------TTCTINHMSSN-----EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHET 83 (373)
Q Consensus 20 ~r~~~igD~h~~~~-----------~~~~l~~l~~~-----~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~ 83 (373)
++|++.+|+|.... ....++++.+. ..-+++.+||++.+... ...
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~-------------------~~~ 61 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPE-------------------SDL 61 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchh-------------------HHh
Confidence 57999999996421 12345555432 33589999999853211 000
Q ss_pred chHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC------C-CCCcceEEEEeCCEEEEEE
Q 017367 84 YQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES------G-SLSSFYYSFNAGGIHFIML 156 (373)
Q Consensus 84 y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~------~-~~~~~~ys~~~g~~~fi~l 156 (373)
++ .....+.|..+ +.-+ .++||||+... ...+....+....|--.. + .....|.-++.+++++-++
T Consensus 62 ~~--g~~~~~~~n~~--g~Da-~~~GNHEfD~G--~~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgvi 134 (285)
T cd07405 62 QD--AEPDFRGMNLV--GYDA-MAVGNHEFDNP--LEVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVI 134 (285)
T ss_pred cC--cchHHHHHHhh--CCcE-EeecccccccC--HHHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEE
Confidence 10 11223445555 4444 46699999643 222222222111111000 0 1123456677888765544
Q ss_pred --ccccc-C--CC----C---hHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccE
Q 017367 157 --GAYIS-Y--DK----S---GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDI 224 (373)
Q Consensus 157 --dt~~~-~--~~----~---~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~l 224 (373)
-+... . .. + .+.++=+++.++++++.+...+|++.|.......... ........+.+.+...++|+
T Consensus 135 G~t~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~~--~~~~~~~~lA~~~~~~giD~ 212 (285)
T cd07405 135 GLTTDDTAKIGNPAYFEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEHG--SNAPGDVEMARALPAGGLDL 212 (285)
T ss_pred EecccccccccCcCCcCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCcccc--ccCchHHHHHHhcCCCCCCE
Confidence 33211 0 00 0 1122223333333332356789999998875322100 00001122333333358999
Q ss_pred EEecccccee
Q 017367 225 VFNGHVHAYE 234 (373)
Q Consensus 225 vl~GH~H~~~ 234 (373)
+|.||+|...
T Consensus 213 IigGHsH~~~ 222 (285)
T cd07405 213 IVGGHSQDPV 222 (285)
T ss_pred EEeCCCCccc
Confidence 9999999844
No 73
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.57 E-value=2.3e-07 Score=84.72 Aligned_cols=73 Identities=25% Similarity=0.409 Sum_probs=48.6
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 20 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
+||+++||+|++... ...++.+.+.++|+||++||++.. .. ... .
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~------~~--------------p~~--~ 58 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDT------AN--------------PPA--E 58 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCC------CC--------------CCH--H
Confidence 589999999986421 123444556799999999999942 11 001 1
Q ss_pred HHHHHHHHHhhhh-cC-CCeEEecCCCCcC
Q 017367 87 RWDYWGRFMQNLV-SK-VPIMVVEGNHEIE 114 (373)
Q Consensus 87 ~~~~~~~~l~~l~-~~-~P~~~v~GNHD~~ 114 (373)
....+.+.++.+. .. +|+++++||||..
T Consensus 59 ~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 59 AQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 1233455566653 24 8999999999985
No 74
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.57 E-value=3.4e-06 Score=76.70 Aligned_cols=189 Identities=15% Similarity=0.239 Sum_probs=101.2
Q ss_pred EEEEEecCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 21 RIAIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 21 r~~~igD~h~~~~~---~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
||+++||+=..... ...+.++.+ .++||+|..||.+... .|. . ....+.|.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg----~gl------------------~---~~~~~~L~ 55 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGG----KGI------------------T---PKIAKELL 55 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCC----CCC------------------C---HHHHHHHH
Confidence 68999998543332 234555544 4799999999998421 111 0 12233444
Q ss_pred hhhcCCCeEEecCCCCcCCCCCCcchhhhhccc---CCCCCCC-CCCCcceEEEEeCCEEEEEEccc--ccCCCChHHHH
Q 017367 97 NLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRF---AFPSEES-GSLSSFYYSFNAGGIHFIMLGAY--ISYDKSGHQYK 170 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~---~~p~~~~-~~~~~~~ys~~~g~~~fi~ldt~--~~~~~~~~Q~~ 170 (373)
.+ ++-+ .+.|||++... ....+.+.. -.|.+-+ ...+..|..++.+++++-+++-. ........-++
T Consensus 56 ~~--G~D~-iTlGNH~fD~g----el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~ 128 (255)
T cd07382 56 SA--GVDV-ITMGNHTWDKK----EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFR 128 (255)
T ss_pred hc--CCCE-EEecccccCcc----hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHH
Confidence 44 5555 45599998643 222332222 1122211 12234577788888776665532 11111122234
Q ss_pred HHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCE
Q 017367 171 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPV 250 (373)
Q Consensus 171 WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~ 250 (373)
-+++.++++++ +.+.+||.+|.-.. .+ ..++...+ +.+||+++.||+|....- ..+-|+|+.
T Consensus 129 ~~~~~v~~lk~-~~D~IIV~~H~g~t---------sE--k~ala~~l-dg~VdvIvGtHTHv~t~d-----~~il~~gTa 190 (255)
T cd07382 129 AADELLEELKE-EADIIFVDFHAEAT---------SE--KIALGWYL-DGRVSAVVGTHTHVQTAD-----ERILPGGTA 190 (255)
T ss_pred HHHHHHHHHhc-CCCEEEEEECCCCC---------HH--HHHHHHhC-CCCceEEEeCCCCccCCc-----cEEeeCCeE
Confidence 46666666553 56789999996321 11 11222211 336999999999974322 112367888
Q ss_pred EEE-eCCCCC
Q 017367 251 HIT-IGDGGN 259 (373)
Q Consensus 251 yi~-~G~gG~ 259 (373)
|++ .|.-|.
T Consensus 191 ~itd~Gm~G~ 200 (255)
T cd07382 191 YITDVGMTGP 200 (255)
T ss_pred EEecCccccC
Confidence 876 344444
No 75
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=98.54 E-value=1.3e-07 Score=83.75 Aligned_cols=37 Identities=24% Similarity=0.344 Sum_probs=25.7
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~-~~pd~vi~~GDl~y 57 (373)
||+++||+|..... .++++.+.. .++|.|+++||+++
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~ 40 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLID 40 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 78999999965332 223333322 36899999999994
No 76
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.52 E-value=1.1e-06 Score=75.25 Aligned_cols=63 Identities=17% Similarity=0.276 Sum_probs=40.4
Q ss_pred EEEecCCCCCCh----------------HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 23 AIVGDLGLTYNT----------------TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 23 ~~igD~h~~~~~----------------~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
.++||+|.+... .+.++.+.+. ++|.||++||++.. +.
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 57 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFG------GK------------------ 57 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCC------CC------------------
Confidence 478999987532 1234444442 78999999999942 21
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
... +.+.++.+ ..|++.|+||||..
T Consensus 58 ~~~---~~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 58 AGT---ELELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred hHH---HHHHHHhC--CCCeEEEeCCCCch
Confidence 011 13344444 56899999999974
No 77
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=98.52 E-value=1.7e-07 Score=82.93 Aligned_cols=23 Identities=17% Similarity=0.299 Sum_probs=19.6
Q ss_pred HHHHHHHHcCccEEEecccccee
Q 017367 212 EMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 212 ~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
.+.++++..+.+++++||+|...
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~~~ 180 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQEG 180 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeeeec
Confidence 57778888899999999999744
No 78
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.49 E-value=4.9e-07 Score=88.02 Aligned_cols=74 Identities=26% Similarity=0.464 Sum_probs=47.9
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 20 KRIAIVGDLGLTYNT-------------TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-------------~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
+||+++||+|++... ..+++.+.+.+||+||++||++.. +.. ..+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~------~~p--------------~~~-- 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT------GSP--------------PSY-- 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccC------CCC--------------cHH--
Confidence 589999999986321 123444556899999999999942 110 011
Q ss_pred HHHHHHHHHhhhh-cCCCeEEecCCCCcCC
Q 017367 87 RWDYWGRFMQNLV-SKVPIMVVEGNHEIEA 115 (373)
Q Consensus 87 ~~~~~~~~l~~l~-~~~P~~~v~GNHD~~~ 115 (373)
....+.+++..+. .++|+++|+||||...
T Consensus 59 a~~~~~~~l~~L~~~~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 59 ARELYNRFVVNLQQTGCQLVVLAGNHDSVA 88 (407)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCChh
Confidence 1122334444442 3689999999999753
No 79
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.36 E-value=6.3e-05 Score=68.68 Aligned_cols=192 Identities=16% Similarity=0.160 Sum_probs=105.1
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 20 ~r~~~igD~h~~~~~---~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
+||+++||.=..... ...+..+.+ .++||+|..||.+... .|.. ....+.|
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG----~Gi~---------------------~~~~~~L 55 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHG----KGLT---------------------LKIYEFL 55 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCC----CCCC---------------------HHHHHHH
Confidence 589999998533211 234555554 4789999999999421 0110 1122333
Q ss_pred hhhhcCCCeEEecCCCCcCCCCCCcchhhhh--cccCCCCCCC-CCCCcceEEEEeCCEEEEEEccc--ccCCC--ChHH
Q 017367 96 QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYS--SRFAFPSEES-GSLSSFYYSFNAGGIHFIMLGAY--ISYDK--SGHQ 168 (373)
Q Consensus 96 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~--~~~~~p~~~~-~~~~~~~ys~~~g~~~fi~ldt~--~~~~~--~~~Q 168 (373)
... ++-++.+ |||.+... +.+.... .+.-.|.+-+ ...+..|..++.++.++-+++-. ..... ...-
T Consensus 56 ~~~--GvDviT~-GNH~~Dkg---e~~~~i~~~~~~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~P 129 (266)
T TIGR00282 56 KQS--GVNYITM-GNHTWFQK---LILDVVINQKDLVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNP 129 (266)
T ss_pred Hhc--CCCEEEc-cchhccCc---HHHHHHhccccccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCH
Confidence 333 6776555 99999643 1111110 1111122211 12344567778888776666532 11111 1223
Q ss_pred HHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCC
Q 017367 169 YKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCG 248 (373)
Q Consensus 169 ~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g 248 (373)
++-+++.+++++. +.+.+||.+|.-.. . .+.....+-+.+|++|+.-|+|...--. .+-|+|
T Consensus 130 f~~~d~~i~~lk~-~~d~IIVd~Haeat-----------s-EK~a~~~~ldg~vsaVvGtHtHV~TaD~-----~il~~g 191 (266)
T TIGR00282 130 FKVLKELINMLKK-DCDLIFVDFHAETT-----------S-EKNAFGMAFDGYVTAVVGTHTHVPTADL-----RILPKG 191 (266)
T ss_pred HHHHHHHHHhhhc-CCCEEEEEeCCCCH-----------H-HHHHHHHHhCCCccEEEeCCCCCCCCcc-----eeCCCC
Confidence 3345555555543 36789999995321 1 1334456666799999999999633221 123789
Q ss_pred CEEEE-eCCCCCc
Q 017367 249 PVHIT-IGDGGNL 260 (373)
Q Consensus 249 ~~yi~-~G~gG~~ 260 (373)
+-|++ +|..|..
T Consensus 192 tayitD~Gm~G~~ 204 (266)
T TIGR00282 192 TAYITDVGMTGPF 204 (266)
T ss_pred CEEEecCCcccCc
Confidence 99987 4555553
No 80
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.36 E-value=4.2e-06 Score=79.63 Aligned_cols=113 Identities=18% Similarity=0.308 Sum_probs=69.2
Q ss_pred CCeEEEEEecCCCCCCh--------------HHHHHHH----H-hCCCCEEEEcCccccccccccCCCCCCccccCCCCC
Q 017367 18 YPKRIAIVGDLGLTYNT--------------TCTINHM----S-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKT 78 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~--------------~~~l~~l----~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~ 78 (373)
.++|++.++|.|+-.+. +..+.+. . ..+||+++++||+.. .|....
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfD------eG~~~~--------- 111 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFD------EGQWAG--------- 111 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccc------cCccCC---------
Confidence 47999999999965421 1112221 1 259999999999994 233211
Q ss_pred CCcccchHHHHHHHHHHhhh---hcCCCeEEecCCCCcCCCCCC--cchhhhhcccCCCCCCCCCCCcceEEEEeCCEEE
Q 017367 79 PIHETYQPRWDYWGRFMQNL---VSKVPIMVVEGNHEIEAQAGN--QTFVAYSSRFAFPSEESGSLSSFYYSFNAGGIHF 153 (373)
Q Consensus 79 ~~~~~y~~~~~~~~~~l~~l---~~~~P~~~v~GNHD~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~f 153 (373)
..+|....+.++.+ ...+|++.++||||+...... .....|.+.| ++...+|++++..|
T Consensus 112 ------~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf~~~~~~~~i~Rfe~~f----------g~~~r~f~v~~~tf 175 (410)
T KOG3662|consen 112 ------DEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIGFGNELIPEWIDRFESVF----------GPTERRFDVGNLTF 175 (410)
T ss_pred ------hHHHHHHHHHHHHhhCCCCCCeeEEeCCccccccccccchhHHHHHHHhh----------cchhhhhccCCcee
Confidence 23444432223333 247999999999999643211 1112333333 33456789999999
Q ss_pred EEEccccc
Q 017367 154 IMLGAYIS 161 (373)
Q Consensus 154 i~ldt~~~ 161 (373)
+++|++..
T Consensus 176 ~~~d~~~l 183 (410)
T KOG3662|consen 176 VMFDSNAL 183 (410)
T ss_pred EEeeehhh
Confidence 99998753
No 81
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=98.29 E-value=2.5e-05 Score=78.91 Aligned_cols=212 Identities=14% Similarity=0.119 Sum_probs=112.2
Q ss_pred CCeEEEEEecCCCCCC------------h----HHHHHHHHhC-CCCEEEEcCccccccccccCCCCCCccccCCCCCCC
Q 017367 18 YPKRIAIVGDLGLTYN------------T----TCTINHMSSN-EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPI 80 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~------------~----~~~l~~l~~~-~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~ 80 (373)
..++|++.+|+|.... . ...++++.++ +..++|.+||++.++...+.
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~---------------- 88 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY---------------- 88 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc----------------
Confidence 4699999999996432 1 1234555444 44689999999965322111
Q ss_pred cccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCC---------CCCCCCcceEEEEeCCE
Q 017367 81 HETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSE---------ESGSLSSFYYSFNAGGI 151 (373)
Q Consensus 81 ~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~---------~~~~~~~~~ys~~~g~~ 151 (373)
........+.|..+ +.- +.++||||+... .+.+..+......|-- ......+.|.-++.+++
T Consensus 89 ----~~~g~~~~~~mN~m--~yD-a~tiGNHEFd~g--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~ 159 (517)
T COG0737 89 ----LTKGEPTVDLLNAL--GYD-AMTLGNHEFDYG--LEALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGV 159 (517)
T ss_pred ----ccCCChHHHHHhhc--CCc-EEeecccccccC--HHHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCe
Confidence 01112234555555 222 678999999643 2223333333333310 01123356778888886
Q ss_pred EE--EEEcccc-c-C---C-----CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHH
Q 017367 152 HF--IMLGAYI-S-Y---D-----KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYS 219 (373)
Q Consensus 152 ~f--i~ldt~~-~-~---~-----~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~ 219 (373)
++ |++-+.. . + . .-....+++++.+.+.+++....+|++.|.+............ ...... .
T Consensus 160 KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~~-~~~~~~----~- 233 (517)
T COG0737 160 KIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEVP-GDVDVA----V- 233 (517)
T ss_pred EEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCcccccccccc-cccccc----c-
Confidence 54 5544311 0 1 1 1235566777777776644467899999988764322111000 000000 0
Q ss_pred cCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCCCcccc
Q 017367 220 YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGGNLEKM 263 (373)
Q Consensus 220 ~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG~~~~~ 263 (373)
..+|+++.||.|.+--... .....+++..+..|.-|...+.
T Consensus 234 ~~iD~i~~GH~H~~~~~~~---~~~~~~~t~ivqag~~gk~vG~ 274 (517)
T COG0737 234 PGIDLIIGGHSHTVFPGGD---KPGTVNGTPIVQAGEYGKYVGV 274 (517)
T ss_pred cCcceEeccCCcccccCCc---ccCccCCEEEEccChhhCceeE
Confidence 3499999999996322110 0012245566666666665444
No 82
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=98.24 E-value=1.9e-05 Score=80.34 Aligned_cols=188 Identities=18% Similarity=0.176 Sum_probs=92.0
Q ss_pred CCeEEEEEecCCCCCC--------h---HHHHHHHHh-----CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCc
Q 017367 18 YPKRIAIVGDLGLTYN--------T---TCTINHMSS-----NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 81 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~--------~---~~~l~~l~~-----~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~ 81 (373)
..++|++++|+|.... . ...++++.+ ...-++|.+||++.+....
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s------------------- 93 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPES------------------- 93 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhh-------------------
Confidence 4799999999996532 1 233444442 2235899999998542110
Q ss_pred ccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-------C-CCCcceEEEEeCCEEE
Q 017367 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNAGGIHF 153 (373)
Q Consensus 82 ~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-------~-~~~~~~ys~~~g~~~f 153 (373)
..+. .....+.|..+ +.- +.++||||+... .+.+..+......|--.. + ..-..|.-++.+++++
T Consensus 94 ~~~~--g~~~i~~mN~~--g~D-a~tlGNHEFD~G--~~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kI 166 (551)
T PRK09558 94 DLQD--AEPDFRGMNLI--GYD-AMAVGNHEFDNP--LSVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKI 166 (551)
T ss_pred hhcC--CchhHHHHhcC--CCC-EEcccccccCcC--HHHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEE
Confidence 0010 11223445544 444 456799998643 222222222222221100 0 1123456678888665
Q ss_pred EEEc--cccc--C-CC-------ChHHHHHHHHHHhhccC-CCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc
Q 017367 154 IMLG--AYIS--Y-DK-------SGHQYKWLEKDLANVDR-SVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY 220 (373)
Q Consensus 154 i~ld--t~~~--~-~~-------~~~Q~~WL~~~L~~~~~-~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~ 220 (373)
-++. +... . .. -....+-+++.+++.++ .+...+|++.|.......... ..... ...+.+-+...
T Consensus 167 giiG~~t~~~~~~~~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~-~~~~~-d~~la~~~~~~ 244 (551)
T PRK09558 167 AVIGLTTEDTAKIGNPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG-SNAPG-DVEMARSLPAG 244 (551)
T ss_pred EEEEEeccccccccCCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC-CCCcc-HHHHHHhCCcc
Confidence 4443 2211 0 00 01122223344444332 367789999998774322110 00000 01222222223
Q ss_pred CccEEEeccccce
Q 017367 221 GVDIVFNGHVHAY 233 (373)
Q Consensus 221 ~v~lvl~GH~H~~ 233 (373)
+||++|.||+|..
T Consensus 245 ~IDvIlgGHsH~~ 257 (551)
T PRK09558 245 GLDMIVGGHSQDP 257 (551)
T ss_pred CceEEEeCCCCcc
Confidence 7999999999974
No 83
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=98.20 E-value=1.6e-05 Score=74.80 Aligned_cols=39 Identities=15% Similarity=0.081 Sum_probs=26.2
Q ss_pred eEEEEEecCCCCCC-------hHHHHHHHHhC----C-CCEEEEcCccccc
Q 017367 20 KRIAIVGDLGLTYN-------TTCTINHMSSN----E-PDLVLLVGDVTYA 58 (373)
Q Consensus 20 ~r~~~igD~h~~~~-------~~~~l~~l~~~----~-pd~vi~~GDl~y~ 58 (373)
++|++.+|+|.... ....++++.+. . .-+++.+||++.+
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qG 51 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIP 51 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccC
Confidence 57999999997632 12345555432 3 3589999999954
No 84
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=98.19 E-value=3.8e-05 Score=77.96 Aligned_cols=174 Identities=16% Similarity=0.169 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCC-------------------h---HHHHHHHHhCCC-CEEEEcCccccccccccCCCCCCccccCCC
Q 017367 20 KRIAIVGDLGLTYN-------------------T---TCTINHMSSNEP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFS 76 (373)
Q Consensus 20 ~r~~~igD~h~~~~-------------------~---~~~l~~l~~~~p-d~vi~~GDl~y~~~~~~~g~~~~~~~~~~~ 76 (373)
++|++++|+|.... . ...++++.+..+ -+++.+||++.+..+
T Consensus 1 ltILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~--------------- 65 (550)
T TIGR01530 1 LSIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLY--------------- 65 (550)
T ss_pred CEEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccc---------------
Confidence 57899999995310 0 123455544444 588899999964321
Q ss_pred CCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC------C----CCCcceEEE
Q 017367 77 KTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES------G----SLSSFYYSF 146 (373)
Q Consensus 77 ~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~------~----~~~~~~ys~ 146 (373)
...+. .+...++|..+ +.- +.++||||+... .+.+..+.+....|--.. . ..-..|.-+
T Consensus 66 ----~~~~~--g~~~i~~~N~~--g~D-a~~lGNHEFd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~ 134 (550)
T TIGR01530 66 ----FTLFG--GRADAALMNAA--GFD-FFTLGNHEFDAG--NEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIF 134 (550)
T ss_pred ----hhhcC--CHHHHHHHhcc--CCC-EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEE
Confidence 11111 11223444444 222 688999998642 223333333222221100 0 012345667
Q ss_pred EeCCE--EEEEEccccc-C---CCC-----hHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHH
Q 017367 147 NAGGI--HFIMLGAYIS-Y---DKS-----GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEA 215 (373)
Q Consensus 147 ~~g~~--~fi~ldt~~~-~---~~~-----~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ 215 (373)
+.+++ -||++.+... . ... ...++=+++..+..++.+...+|++.|..... . .+
T Consensus 135 ~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~--------d-------~~ 199 (550)
T TIGR01530 135 ERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGFEK--------N-------CE 199 (550)
T ss_pred EECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH--------H-------HH
Confidence 88884 4566644211 0 010 11222233333333334567899999965311 1 12
Q ss_pred HHHHc-CccEEEecccccee
Q 017367 216 LLYSY-GVDIVFNGHVHAYE 234 (373)
Q Consensus 216 ll~~~-~v~lvl~GH~H~~~ 234 (373)
+.++. +||++|+||+|..-
T Consensus 200 la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 200 IAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred HHhcCCCCCEEEeCCCCccc
Confidence 33333 79999999999854
No 85
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=98.18 E-value=5.3e-05 Score=61.98 Aligned_cols=66 Identities=17% Similarity=0.241 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCC----------h----HHHHHHHHh-CC-CCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 21 RIAIVGDLGLTYN----------T----TCTINHMSS-NE-PDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 21 r~~~igD~h~~~~----------~----~~~l~~l~~-~~-pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
.+-++||+|.+-. . ..++...++ .+ =|.+.++||++... .
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~------n------------------ 60 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGA------N------------------ 60 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEeccccccc------c------------------
Confidence 5778999997531 1 123333333 24 48999999999421 0
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
.-..+..+++.| +--...|+||||-.
T Consensus 61 --~~~~a~~IlerL--nGrkhlv~GNhDk~ 86 (186)
T COG4186 61 --RERAAGLILERL--NGRKHLVPGNHDKC 86 (186)
T ss_pred --hhhHHHHHHHHc--CCcEEEeeCCCCCC
Confidence 012456777777 33458999999975
No 86
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.15 E-value=5e-06 Score=71.40 Aligned_cols=70 Identities=21% Similarity=0.435 Sum_probs=42.9
Q ss_pred EEEecCCCCCCh--------------HHHHHH----HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 23 AIVGDLGLTYNT--------------TCTINH----MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 23 ~~igD~h~~~~~--------------~~~l~~----l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
+++||+|.+... .+++++ +.+.+||.||++||+++... +. .
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~----~~----------------~- 59 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFG----GL----------------S- 59 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccc----cc----------------C-
Confidence 478999987421 123333 34579999999999995310 11 0
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
...+.... .+......+|+++++||||..
T Consensus 60 ~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 60 RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 11222222 233335688999999999974
No 87
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=98.13 E-value=1.3e-05 Score=66.95 Aligned_cols=50 Identities=14% Similarity=-0.075 Sum_probs=30.7
Q ss_pred EEEEeCCCCcCCCCCC-c----cchHHHHHHHHHHHHHcCccEEEecccc-ceeee
Q 017367 187 LVATWHPPWYSSYSSH-Y----REAECMRVEMEALLYSYGVDIVFNGHVH-AYERS 236 (373)
Q Consensus 187 iIv~~H~P~~~~~~~~-~----~~~~~~~~~l~~ll~~~~v~lvl~GH~H-~~~r~ 236 (373)
-|+++|.|++...... . .........+.+++++.++.++||||.| .|||-
T Consensus 71 DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~fyer~ 126 (150)
T cd07380 71 DILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVFYERE 126 (150)
T ss_pred CEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCceEeec
Confidence 4677777775532100 0 0011123567788888899999999999 55553
No 88
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.02 E-value=0.00018 Score=75.17 Aligned_cols=76 Identities=21% Similarity=0.065 Sum_probs=41.4
Q ss_pred HHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccceeeeeecccCccCCCCCEE
Q 017367 173 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYERSNRVFNYTLDPCGPVH 251 (373)
Q Consensus 173 ~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~y 251 (373)
++.+.+.++.....||++.|........ ...... .. ..+.+. +||++|.||+|..... ..+|+..
T Consensus 234 ~~~v~~Lr~~GaDvIIaLsH~G~~~d~~---~~~~en--a~-~~l~~v~gID~IlgGHsH~~~~~--------~ingv~v 299 (780)
T PRK09418 234 KKMVPKMKAEGADVIVALAHSGVDKSGY---NVGMEN--AS-YYLTEVPGVDAVLMGHSHTEVKD--------VFNGVPV 299 (780)
T ss_pred HHHHHHHHhcCCCEEEEEeccCcccccc---cccchh--hh-HHHhcCCCCCEEEECCCCCcccc--------cCCCEEE
Confidence 3333333334577899999987643211 110111 11 113443 8999999999985432 1235555
Q ss_pred EEeCCCCCccc
Q 017367 252 ITIGDGGNLEK 262 (373)
Q Consensus 252 i~~G~gG~~~~ 262 (373)
+..|.-|...+
T Consensus 300 vqaG~~G~~LG 310 (780)
T PRK09418 300 VMPGVFGSNLG 310 (780)
T ss_pred EEcChhhcEEE
Confidence 66666555544
No 89
>PHA02239 putative protein phosphatase
Probab=98.01 E-value=1.4e-05 Score=72.02 Aligned_cols=70 Identities=17% Similarity=0.306 Sum_probs=43.5
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhC--CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSN--EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQ 96 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~--~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~ 96 (373)
+|+++|||+|..... .+.++.+... ..|.|+++||++. .|.. ..+.+..+++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iD------rG~~-------------------s~~v~~~l~~ 55 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVD------RGKR-------------------SKDVVNYIFD 55 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCC------CCCC-------------------hHHHHHHHHH
Confidence 478999999965432 3455555433 3599999999994 2321 0112222333
Q ss_pred hhhcCCCeEEecCCCCcC
Q 017367 97 NLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 97 ~l~~~~P~~~v~GNHD~~ 114 (373)
.+....++++++||||..
T Consensus 56 ~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 56 LMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred HhhcCCCeEEEECCcHHH
Confidence 223356899999999963
No 90
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.00 E-value=0.00026 Score=74.29 Aligned_cols=194 Identities=17% Similarity=0.090 Sum_probs=93.0
Q ss_pred CCeEEEEEecCCCCCC-----------------hHHHHHHHHhCCC-CEEEEcCccccccccccCCCCCCccccCCCCCC
Q 017367 18 YPKRIAIVGDLGLTYN-----------------TTCTINHMSSNEP-DLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTP 79 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~-----------------~~~~l~~l~~~~p-d~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~ 79 (373)
..+||+..+|+|.... ....|+++.++.+ -++|..||++.+..+.+--..
T Consensus 114 ~~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~------------ 181 (814)
T PRK11907 114 VDVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAI------------ 181 (814)
T ss_pred eEEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhh------------
Confidence 3699999999996421 1124555554444 489999999965432100000
Q ss_pred CcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCC-------C-CCCcceEEEEe---
Q 017367 80 IHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEES-------G-SLSSFYYSFNA--- 148 (373)
Q Consensus 80 ~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~-------~-~~~~~~ys~~~--- 148 (373)
....++..-....+.|..+ +.- ..++||||+... .+.+..+.+....|--.. + ..-..|--++.
T Consensus 182 ~~~~~~g~~~P~i~amN~L--GyD-A~tLGNHEFDyG--~d~L~~~l~~a~fPvl~ANV~~~~~~~~~~~PY~I~e~~~~ 256 (814)
T PRK11907 182 VDPVEEGEQHPMYAALEAL--GFD-AGTLGNHEFNYG--LDYLEKVIATANMPIVNANVLDPTTGDFLYTPYTIVTKTFT 256 (814)
T ss_pred ccccccCcchHHHHHHhcc--CCC-EEEechhhcccC--HHHHHHHHHhCCCCEEEeeeeecCCCCccCCCeEEEEEEEe
Confidence 0000000001234455555 332 578999998643 222333322222221110 0 01123333443
Q ss_pred --CC------EEEEEEcccc--cCCC--------ChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHH
Q 017367 149 --GG------IHFIMLGAYI--SYDK--------SGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMR 210 (373)
Q Consensus 149 --g~------~~fi~ldt~~--~~~~--------~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~ 210 (373)
+| +-||++-+.. .+.. -.+-.+-+++...+.++.+.+.||++.|.-.......... +.
T Consensus 257 d~~G~~~~vKIGiIGlvtp~~~~w~~~~l~g~v~f~D~veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~--En-- 332 (814)
T PRK11907 257 DTEGKKVTLNIGITGIVPPQILNWDKANLEGKVIVRDAVEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGE--EN-- 332 (814)
T ss_pred cCCCcccceEEEEEEeCchhhhhcccccccCCeEECCHHHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccc--cc--
Confidence 33 4556654321 1110 1233344555555554456788999999876432111001 11
Q ss_pred HHHHHHHHHcCccEEEeccccce
Q 017367 211 VEMEALLYSYGVDIVFNGHVHAY 233 (373)
Q Consensus 211 ~~l~~ll~~~~v~lvl~GH~H~~ 233 (373)
.-..+.+--+||++|.||+|..
T Consensus 333 -~~~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 333 -VGYQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred -hhhHHhcCCCCCEEEECCCCCc
Confidence 1112222248999999999984
No 91
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.98 E-value=0.00013 Score=80.56 Aligned_cols=58 Identities=24% Similarity=0.264 Sum_probs=34.8
Q ss_pred HHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEecccccee
Q 017367 172 LEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAYE 234 (373)
Q Consensus 172 L~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~~ 234 (373)
+++.+.++++.+...+|++.|........... . .....+|.++. +||++|.||+|...
T Consensus 223 ~~~~v~~lk~~gaDvII~l~H~G~~~~~~~~~--~---en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 223 ANKTIPEMKKGGADVIVALAHSGIESEYQSSG--A---EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred HHHHHHHHHhcCCCEEEEEeccCcCCCCCCCC--c---chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 33444444335678899999988654321111 1 12233455444 79999999999864
No 92
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=97.97 E-value=8.8e-05 Score=68.57 Aligned_cols=182 Identities=21% Similarity=0.278 Sum_probs=100.7
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhC---CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSN---EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~---~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
+||+|-|..|..-+. -+++..+.+. ++|++|++||+-.- .++..-.+ -.....|+.. ..|.+..
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQav----Rn~~D~~s-------iavPpKy~~m-~~F~~YY 68 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAV----RNEQDLKS-------IAVPPKYRRM-GDFYKYY 68 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhh----cchhhccc-------ccCCHHHHHH-HHHHHHh
Confidence 589999999975432 3456666654 89999999998632 12221110 0122334322 2222222
Q ss_pred -hhhhcCCCeEEecCCCCcCCCCCCcchhhhhcccCCCCCCCCCCCcceE-----EEEeCCEEEEEEccc---ccCCCC-
Q 017367 96 -QNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSSRFAFPSEESGSLSSFYY-----SFNAGGIHFIMLGAY---ISYDKS- 165 (373)
Q Consensus 96 -~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~y-----s~~~g~~~fi~ldt~---~~~~~~- 165 (373)
.++.+.+|.++|=||||.. .|+... |..+ -...+.|| .+.++|+|+-+|... .++..+
T Consensus 69 sge~~APVlTIFIGGNHEAs---------nyL~eL--pyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh 136 (456)
T KOG2863|consen 69 SGEIKAPVLTIFIGGNHEAS---------NYLQEL--PYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGH 136 (456)
T ss_pred CCcccCceeEEEecCchHHH---------HHHHhc--ccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCC
Confidence 3345678889999999973 333321 2110 01234555 477899999999863 222110
Q ss_pred ----------------hHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHH-------H----------HHH
Q 017367 166 ----------------GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAEC-------M----------RVE 212 (373)
Q Consensus 166 ----------------~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~-------~----------~~~ 212 (373)
-.+++ -..|.+. +.|.-|++.|.=+.... .++.... + ...
T Consensus 137 ~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~ 209 (456)
T KOG2863|consen 137 FEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPA 209 (456)
T ss_pred CCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChH
Confidence 11111 1123333 34567888885332211 1111110 1 246
Q ss_pred HHHHHHHcCccEEEeccccc
Q 017367 213 MEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 213 l~~ll~~~~v~lvl~GH~H~ 232 (373)
+++||++-++..+|+.|.|.
T Consensus 210 ~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 210 LEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHHHhCcchhhhhhHhh
Confidence 78899999999999999996
No 93
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.87 E-value=2.4e-05 Score=72.04 Aligned_cols=67 Identities=24% Similarity=0.359 Sum_probs=44.1
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhh
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQN 97 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~ 97 (373)
+++++|||+|..... .++++++. ..+.|.++++||++. .|.. -....+.+..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVd------rGp~--------------------s~~vl~~l~~ 54 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVN------RGPD--------------------SLEVLRFVKS 54 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccC------CCcC--------------------HHHHHHHHHh
Confidence 368999999976543 33455543 246899999999994 2321 1123344444
Q ss_pred hhcCCCeEEecCCCCcC
Q 017367 98 LVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 98 l~~~~P~~~v~GNHD~~ 114 (373)
+ +.++++|.||||..
T Consensus 55 l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 55 L--GDSAVTVLGNHDLH 69 (275)
T ss_pred c--CCCeEEEecChhHH
Confidence 4 45789999999973
No 94
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.85 E-value=4.7e-05 Score=68.12 Aligned_cols=70 Identities=17% Similarity=0.334 Sum_probs=47.3
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHH----hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCc
Q 017367 20 KRIAIVGDLGLTYNT--------------TCTINHMS----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 81 (373)
Q Consensus 20 ~r~~~igD~h~~~~~--------------~~~l~~l~----~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~ 81 (373)
-+.+++||+|.+... .++++++. +.+||.||++||+.+... .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~-----~--------------- 74 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK-----K--------------- 74 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC-----C---------------
Confidence 478999999987421 13454443 358999999999995311 0
Q ss_pred ccchHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 82 ~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
...++.+.++++.+ ..+++.|+||||..
T Consensus 75 ---~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 75 ---GLEWRFIREFIEVT--FRDLILIRGNHDAL 102 (225)
T ss_pred ---hHHHHHHHHHHHhc--CCcEEEECCCCCCc
Confidence 02344555566555 46999999999963
No 95
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=97.85 E-value=0.00052 Score=66.43 Aligned_cols=89 Identities=16% Similarity=0.331 Sum_probs=57.9
Q ss_pred CCeEEEEEecCCCCCCh------HHHHHHHH-----hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 18 YPKRIAIVGDLGLTYNT------TCTINHMS-----SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 18 ~~~r~~~igD~h~~~~~------~~~l~~l~-----~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
..+++++++|.|.+... ...++.|. +.+...++.+||++.+-+.+. |+. .+....+.| .
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYp-gq~--------~eL~i~di~-~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYP-GQE--------EELVIADIY-E 293 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEeccccccccccc-Ccc--------cccccccch-H
Confidence 46899999999986431 23444443 235689999999995432221 221 111222233 2
Q ss_pred HHHHHHHHHhhhhcCCCeEEecCCCCcCCC
Q 017367 87 RWDYWGRFMQNLVSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 87 ~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~ 116 (373)
+++.+.+.+..+...+.++..|||||....
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcccc
Confidence 567778888888888999999999998644
No 96
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.75 E-value=4.6e-05 Score=68.80 Aligned_cols=68 Identities=22% Similarity=0.339 Sum_probs=43.0
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHh----------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHH
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSS----------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 89 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~----------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~ 89 (373)
||+++||+|..... .++++++.- .+.|.++++||++. .|.. ..
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlID------rG~~--------------------s~ 55 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVD------RGPD--------------------SP 55 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccC------CCCC--------------------HH
Confidence 79999999976543 344555421 13689999999994 2321 12
Q ss_pred HHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 90 YWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 90 ~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
...+.+..+.....++++.||||..
T Consensus 56 evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 56 EVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHHHHHhhCCcEEEEECCcHHH
Confidence 2334444443334688999999963
No 97
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=97.67 E-value=0.0012 Score=59.94 Aligned_cols=191 Identities=15% Similarity=0.210 Sum_probs=96.8
Q ss_pred EEEEecCCCCCCh------HHHHHHHHh-----------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccc
Q 017367 22 IAIVGDLGLTYNT------TCTINHMSS-----------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETY 84 (373)
Q Consensus 22 ~~~igD~h~~~~~------~~~l~~l~~-----------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y 84 (373)
++++||+|.+... +..++.|.- .+..-+|++||.+....-..+.... ............+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~---~~~~~~~~~~~~~ 78 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTK---ARYLTKKSSAASV 78 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhh---hhccccccchhhH
Confidence 7899999987652 122333321 2345799999999542110000000 0000000011112
Q ss_pred hHHHHHHHHHHhhhhcCCCeEEecCCCCcCCCCCCc-ch-hhhhcccCCCCCCCCCCCcceEEEEeCCEEEEEEccccc-
Q 017367 85 QPRWDYWGRFMQNLVSKVPIMVVEGNHEIEAQAGNQ-TF-VAYSSRFAFPSEESGSLSSFYYSFNAGGIHFIMLGAYIS- 161 (373)
Q Consensus 85 ~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~-~~-~~~~~~~~~p~~~~~~~~~~~ys~~~g~~~fi~ldt~~~- 161 (373)
...+.+..++..+.+.+|+..+|||||-....-.+ .+ ..+..+-....+ -....+ -|.|+++|++|++.....-
T Consensus 79 -~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~~lfp~s~~~~~-~~~vtN-P~~~~i~g~~vLgtsGqni~ 155 (257)
T cd07387 79 -EAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHRCLFPKSSNYST-LNLVTN-PYEFSIDGVRVLGTSGQNVD 155 (257)
T ss_pred -HHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCHHHhhcccccCC-cEEeCC-CeEEEECCEEEEEECCCCHH
Confidence 34667778888888899999999999976432111 00 011000000000 001122 2569999999999987531
Q ss_pred ----CCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc--chHHHHHHHHHHHHHcCccEEEeccccceee
Q 017367 162 ----YDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR--EAECMRVEMEALLYSYGVDIVFNGHVHAYER 235 (373)
Q Consensus 162 ----~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~--~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r 235 (373)
+.....-++.|++.|+--. - .|.++..-..+. .. .+++-+.-.+++++||.|.|+.
T Consensus 156 Di~ky~~~~~~l~~me~~L~wrH--l---------aPTaPDTL~~yP~~~~-------Dpfvi~~~PhVyf~Gnq~~f~t 217 (257)
T cd07387 156 DILKYSSLESRLDILERTLKWRH--I---------APTAPDTLWCYPFTDR-------DPFILEECPHVYFAGNQPKFGT 217 (257)
T ss_pred HHHHhCCCCCHHHHHHHHHHhcc--c---------CCCCCCccccccCCCC-------CceeecCCCCEEEeCCCcceee
Confidence 2334455777877776410 0 111111000000 00 0122233589999999999876
Q ss_pred e
Q 017367 236 S 236 (373)
Q Consensus 236 ~ 236 (373)
.
T Consensus 218 ~ 218 (257)
T cd07387 218 K 218 (257)
T ss_pred e
Confidence 4
No 98
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=97.67 E-value=0.00056 Score=70.44 Aligned_cols=54 Identities=26% Similarity=0.204 Sum_probs=30.6
Q ss_pred HHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccce
Q 017367 174 KDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAY 233 (373)
Q Consensus 174 ~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~ 233 (373)
+.+.+.++.....||++.|........... .+. ....+.+. +||++|+||+|..
T Consensus 186 ~~v~~Lr~~gaDvII~LsH~G~~~d~~~~~--~en----~~~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 186 KYVPEMKAKGADIIVALAHSGISADPYQPG--AEN----SAYYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred HHHHHHHHcCCCEEEEEeccCcCCCccccc--cch----HHHHHhcCCCCCEEEcCCCCcc
Confidence 333333334577899999987643211100 111 11123443 8999999999984
No 99
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=97.59 E-value=0.00013 Score=65.19 Aligned_cols=37 Identities=27% Similarity=0.405 Sum_probs=27.8
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhC-CCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSSN-EPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~~-~pd~vi~~GDl~y 57 (373)
|+.++||+|..... .++++++... +.|-++++||++.
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvD 56 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLID 56 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccC
Confidence 99999999976543 3455555433 6799999999994
No 100
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.58 E-value=0.0001 Score=67.01 Aligned_cols=68 Identities=24% Similarity=0.300 Sum_probs=41.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHh---------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHH
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSS---------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWD 89 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~---------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~ 89 (373)
+|+.++||+|..... .+.++++.- ..-|.++++||++. .|.. . .
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD------RGp~---------------S-----~ 54 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD------RGPH---------------S-----L 54 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC------CCcC---------------h-----H
Confidence 378999999975433 334444321 12479999999994 3431 0 1
Q ss_pred HHHHHHhhhhcCCCeEEecCCCCc
Q 017367 90 YWGRFMQNLVSKVPIMVVEGNHEI 113 (373)
Q Consensus 90 ~~~~~l~~l~~~~P~~~v~GNHD~ 113 (373)
...+.+..+.....++++.||||.
T Consensus 55 ~vl~~~~~~~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 55 RMIEIVWELVEKKAAYYVPGNHCN 78 (245)
T ss_pred HHHHHHHHHhhCCCEEEEeCccHH
Confidence 122333333234579999999995
No 101
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=97.54 E-value=0.026 Score=50.07 Aligned_cols=185 Identities=17% Similarity=0.228 Sum_probs=101.0
Q ss_pred eEEEEEecCCCCCChHH---HHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHH
Q 017367 20 KRIAIVGDLGLTYNTTC---TINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFM 95 (373)
Q Consensus 20 ~r~~~igD~h~~~~~~~---~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l 95 (373)
+|++++||+=....... -+..+.+ .++||||..|-.+-.- .|. .++.+..++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G----~Gi--------------------t~k~y~~l~ 56 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGG----FGI--------------------TEKIYKELL 56 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCC----cCC--------------------CHHHHHHHH
Confidence 58999999865444333 3344443 4899999999998421 122 123333333
Q ss_pred hhhhcCCCeEEecCCCCcCCCCCCcchh--hhhcccCCCCCCC-CCCCcceEEEEeCCEEEEEEcc--cccCCC-ChHHH
Q 017367 96 QNLVSKVPIMVVEGNHEIEAQAGNQTFV--AYSSRFAFPSEES-GSLSSFYYSFNAGGIHFIMLGA--YISYDK-SGHQY 169 (373)
Q Consensus 96 ~~l~~~~P~~~v~GNHD~~~~~~~~~~~--~~~~~~~~p~~~~-~~~~~~~ys~~~g~~~fi~ldt--~~~~~~-~~~Q~ 169 (373)
+ .++- +.++|||=+... +.+. .-..++-.|.+-+ +..+..|.-|...+..+.++|- ...... -..-.
T Consensus 57 ~---~G~d-viT~GNH~wd~~---ei~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF 129 (266)
T COG1692 57 E---AGAD-VITLGNHTWDQK---EILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPF 129 (266)
T ss_pred H---hCCC-EEecccccccch---HHHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHH
Confidence 2 2555 478999987531 1111 1112233344322 2445667778887766655553 222111 12233
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCC
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGP 249 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~ 249 (373)
+=+++.|...+ .+++.+||-+|.-..+.- .+| -..-+.+|.+|+.=|+|.... ...+-++|+
T Consensus 130 ~~~d~l~~~~~-~~~~~iiVDFHAEtTSEK-----------~a~-g~yldGrvsavvGTHTHV~Ta-----D~rIL~~GT 191 (266)
T COG1692 130 KAADKLLDEIK-LGTDLIIVDFHAETTSEK-----------NAF-GWYLDGRVSAVVGTHTHVPTA-----DERILPKGT 191 (266)
T ss_pred HHHHHHHHhCc-cCCceEEEEccccchhhh-----------hhh-heEEcCeEEEEEeccCccccc-----cceecCCCc
Confidence 44566666654 345679999895432110 111 122244799999999996322 222357889
Q ss_pred EEEE
Q 017367 250 VHIT 253 (373)
Q Consensus 250 ~yi~ 253 (373)
-|++
T Consensus 192 ayiT 195 (266)
T COG1692 192 AYIT 195 (266)
T ss_pred EEEe
Confidence 9986
No 102
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=97.53 E-value=0.00015 Score=64.97 Aligned_cols=67 Identities=18% Similarity=0.300 Sum_probs=41.4
Q ss_pred EEEEecCCCCCCh-HHHHHHHHhC--------CCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHH
Q 017367 22 IAIVGDLGLTYNT-TCTINHMSSN--------EPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWG 92 (373)
Q Consensus 22 ~~~igD~h~~~~~-~~~l~~l~~~--------~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~ 92 (373)
+.+|||+|..... .+.++++... ..|.+|++||++. .|.. -....
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~ID------RGp~--------------------S~~vl 54 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLID------RGPE--------------------IRELL 54 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccC------CCCC--------------------HHHHH
Confidence 3689999976543 3345554321 3689999999994 2331 12233
Q ss_pred HHHhhhhcCCCeEEecCCCCcC
Q 017367 93 RFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 93 ~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
+.+..+...-.++++.||||..
T Consensus 55 ~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 55 EIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred HHHHHhhcCCCEEEEEccCcHH
Confidence 4444443334689999999963
No 103
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=97.53 E-value=0.00012 Score=65.37 Aligned_cols=38 Identities=32% Similarity=0.517 Sum_probs=27.4
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHH-hCCCCEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~-~~~pd~vi~~GDl~y 57 (373)
-|++++||+|..... .++++.+. ..+.|.++++||++.
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vd 54 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNID 54 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcC
Confidence 399999999975433 33444443 246899999999994
No 104
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=97.52 E-value=0.0003 Score=62.43 Aligned_cols=73 Identities=21% Similarity=0.449 Sum_probs=48.8
Q ss_pred eEEEEEecCCCCCCh--------------HH---HHHH-HHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCc
Q 017367 20 KRIAIVGDLGLTYNT--------------TC---TINH-MSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIH 81 (373)
Q Consensus 20 ~r~~~igD~h~~~~~--------------~~---~l~~-l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~ 81 (373)
-+.++++|+|.+... .+ .+++ +.+.+|+-+|++||+-..- +
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~-----~---------------- 78 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEF-----G---------------- 78 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccccc-----C----------------
Confidence 588999999987532 12 2332 3457999999999999631 1
Q ss_pred ccchHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 82 ETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 82 ~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
.....+|+....+++.+... -++++.||||-+
T Consensus 79 ~~~~~e~~~~~~f~~~~~~~-evi~i~GNHD~~ 110 (235)
T COG1407 79 KSLRQEKEEVREFLELLDER-EVIIIRGNHDNG 110 (235)
T ss_pred ccccccHHHHHHHHHHhccC-cEEEEeccCCCc
Confidence 11234555566666655433 599999999975
No 105
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=97.49 E-value=0.0018 Score=66.98 Aligned_cols=58 Identities=22% Similarity=0.201 Sum_probs=32.5
Q ss_pred HHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHc-CccEEEeccccce
Q 017367 170 KWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSY-GVDIVFNGHVHAY 233 (373)
Q Consensus 170 ~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~-~v~lvl~GH~H~~ 233 (373)
+-+++...+.++.+...||++.|........... .+ .... .+.+. +||++|.||+|..
T Consensus 205 e~a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~--ae---n~~~-~l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 205 ETARKYVPEMKEKGADIVVAIPHSGISADPYKAM--AE---NSVY-YLSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcCCCCcccc--cc---chhH-HHhcCCCCCEEEeCCCCcc
Confidence 3344444444434578899999987643211000 01 1111 12333 7999999999985
No 106
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=97.46 E-value=0.00021 Score=65.16 Aligned_cols=64 Identities=25% Similarity=0.349 Sum_probs=42.0
Q ss_pred EEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhc
Q 017367 23 AIVGDLGLTYNT-TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS 100 (373)
Q Consensus 23 ~~igD~h~~~~~-~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~ 100 (373)
.+|||+|..... +++++++.- .+.|.++++||++. .|.. -....+.+..+
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVd------RGp~--------------------s~evl~~l~~l-- 53 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVN------RGPD--------------------SLETLRFVKSL-- 53 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCC------CCcC--------------------HHHHHHHHHhc--
Confidence 589999976543 345555542 36799999999994 2331 12234444444
Q ss_pred CCCeEEecCCCCcC
Q 017367 101 KVPIMVVEGNHEIE 114 (373)
Q Consensus 101 ~~P~~~v~GNHD~~ 114 (373)
+..+..|+||||..
T Consensus 54 ~~~v~~VlGNHD~~ 67 (257)
T cd07422 54 GDSAKTVLGNHDLH 67 (257)
T ss_pred CCCeEEEcCCchHH
Confidence 34788999999974
No 107
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=97.37 E-value=0.00043 Score=63.63 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=26.4
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhC------CCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSSN------EPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~~------~pd~vi~~GDl~y 57 (373)
++.++||+|..... .++++.|.+. ..+.+|++||++.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVD 46 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCD 46 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCC
Confidence 78999999976543 3445555422 3568999999994
No 108
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=97.33 E-value=0.00037 Score=63.83 Aligned_cols=65 Identities=25% Similarity=0.417 Sum_probs=42.5
Q ss_pred EEEEEecCCCCCCh-HHHHHHHH-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMS-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
++.+|||+|..... .+.++++. ....|-++++||++. .|.. -....+.+..+
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVd------RGP~--------------------slevL~~l~~l 55 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVA------RGPG--------------------SLEVLRYVKSL 55 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccC------CCCC--------------------HHHHHHHHHhc
Confidence 57899999986543 45566664 235799999999994 2321 11233444444
Q ss_pred hcCCCeEEecCCCCc
Q 017367 99 VSKVPIMVVEGNHEI 113 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~ 113 (373)
+..+..|.||||.
T Consensus 56 --~~~~~~VlGNHD~ 68 (279)
T TIGR00668 56 --GDAVRLVLGNHDL 68 (279)
T ss_pred --CCCeEEEEChhHH
Confidence 3346789999996
No 109
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=97.26 E-value=0.00047 Score=61.62 Aligned_cols=65 Identities=17% Similarity=0.230 Sum_probs=40.4
Q ss_pred EEecCCCCCCh-HHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhc-C
Q 017367 24 IVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVS-K 101 (373)
Q Consensus 24 ~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~-~ 101 (373)
++||+|..... .++++.+.....|.+|++||++.. |.. .......+..+.. .
T Consensus 2 ~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdr------g~~--------------------~~~~l~~l~~~~~~~ 55 (225)
T cd00144 2 VIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDR------GPD--------------------SVEVIDLLLALKILP 55 (225)
T ss_pred EEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCC------CCC--------------------cHHHHHHHHHhcCCC
Confidence 79999965432 234444444578999999999942 321 0122233333311 4
Q ss_pred CCeEEecCCCCcC
Q 017367 102 VPIMVVEGNHEIE 114 (373)
Q Consensus 102 ~P~~~v~GNHD~~ 114 (373)
.+++.+.||||..
T Consensus 56 ~~~~~l~GNHe~~ 68 (225)
T cd00144 56 DNVILLRGNHEDM 68 (225)
T ss_pred CcEEEEccCchhh
Confidence 5799999999975
No 110
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=97.20 E-value=0.00089 Score=60.25 Aligned_cols=136 Identities=21% Similarity=0.345 Sum_probs=82.8
Q ss_pred cCCCeEEecCCCCcCCCCCCcc-------hhhhhcccC-------CCCCCC-CCCCcceEEEEeCCEEEEEEcccccCC-
Q 017367 100 SKVPIMVVEGNHEIEAQAGNQT-------FVAYSSRFA-------FPSEES-GSLSSFYYSFNAGGIHFIMLGAYISYD- 163 (373)
Q Consensus 100 ~~~P~~~v~GNHD~~~~~~~~~-------~~~~~~~~~-------~p~~~~-~~~~~~~ys~~~g~~~fi~ldt~~~~~- 163 (373)
-.+|+|.-+||||.....-... ...|...+. -|.... -..-..-||+++|+++.+-+-+.....
T Consensus 169 ~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~ 248 (392)
T COG5555 169 MHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAE 248 (392)
T ss_pred eeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeeeccccC
Confidence 3689999999999875422211 122222111 111110 122345689999999999887654321
Q ss_pred -CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCcc----------------chHHHHHHHHHHHHHcCccEEE
Q 017367 164 -KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYR----------------EAECMRVEMEALLYSYGVDIVF 226 (373)
Q Consensus 164 -~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~----------------~~~~~~~~l~~ll~~~~v~lvl 226 (373)
...--+-||+.+|........| ++++.|.-.-......++ .....+..|...++.|+|...+
T Consensus 249 ~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~f 327 (392)
T COG5555 249 PGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTF 327 (392)
T ss_pred CCccccCcceeccceeeccCCCc-eeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEec
Confidence 1234578999999987655666 788888653221111110 0112367888899999999999
Q ss_pred eccccceeee
Q 017367 227 NGHVHAYERS 236 (373)
Q Consensus 227 ~GH~H~~~r~ 236 (373)
.||.|.+...
T Consensus 328 hGhkhd~~ma 337 (392)
T COG5555 328 HGHKHDFNMA 337 (392)
T ss_pred ccccccccee
Confidence 9999986443
No 111
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=97.10 E-value=0.011 Score=53.47 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=70.3
Q ss_pred HHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhh---hcccCCCCCCCCCC---CcceEEEEeCCEEE--EEEcccccC
Q 017367 91 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAY---SSRFAFPSEESGSL---SSFYYSFNAGGIHF--IMLGAYISY 162 (373)
Q Consensus 91 ~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~---~~~~~~p~~~~~~~---~~~~ys~~~g~~~f--i~ldt~~~~ 162 (373)
..+.|..+ ++-++.+.+||++.... +.+... .+.-.++..+.+.. ...+..++.+++++ +.+.+....
T Consensus 69 ~~~~L~~~--G~d~~tlaNNH~fD~G~--~gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~ 144 (239)
T cd07381 69 VADALKAA--GFDVVSLANNHTLDYGE--EGLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNG 144 (239)
T ss_pred HHHHHHHh--CCCEEEcccccccccch--HHHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCC
Confidence 34445544 66766666699986432 222221 12222332211110 13455677888554 444432111
Q ss_pred C----------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccc
Q 017367 163 D----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 163 ~----------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
. ......+-+++.++++++. .+++||+.|-...... ........+...+.+.++|+|+.||.|.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~i~~lr~~-~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv 218 (239)
T cd07381 145 IPLAAGARPGGVNPLDLERIAADIAEAKKK-ADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHV 218 (239)
T ss_pred CcCcccCCccccCccCHHHHHHHHHHHhhc-CCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCc
Confidence 0 1112234456666666543 7789999996542211 1111234455555567899999999998
Q ss_pred eeee
Q 017367 233 YERS 236 (373)
Q Consensus 233 ~~r~ 236 (373)
.+-.
T Consensus 219 ~q~~ 222 (239)
T cd07381 219 LQGI 222 (239)
T ss_pred CCCe
Confidence 7644
No 112
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=96.90 E-value=0.022 Score=51.52 Aligned_cols=136 Identities=13% Similarity=0.142 Sum_probs=69.0
Q ss_pred HHHHHhhhhcCCCeEEecCCCCcCCCCCCcchhhhhc---ccCCCCCCCCCC---CcceEEEEeCCEEEEEEc--cccc-
Q 017367 91 WGRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEESGSL---SSFYYSFNAGGIHFIMLG--AYIS- 161 (373)
Q Consensus 91 ~~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~---~~~~p~~~~~~~---~~~~ys~~~g~~~fi~ld--t~~~- 161 (373)
..+.|..+ +.-++.+.+||++.... +.+....+ ...++..+.+.. ...+..++.+++++-++. +...
T Consensus 65 ~~~~l~~~--G~d~~~laNNH~fD~G~--~gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~ 140 (239)
T smart00854 65 NAAALKAA--GFDVVSLANNHSLDYGE--EGLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNN 140 (239)
T ss_pred HHHHHHHh--CCCEEEeccCcccccch--HHHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCC
Confidence 44555555 66666666699996432 22222111 112332211111 123556778886654443 2211
Q ss_pred -CC----------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccc
Q 017367 162 -YD----------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHV 230 (373)
Q Consensus 162 -~~----------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~ 230 (373)
+. ......+=+++.++++++ +.+++||+.|--...... .. .....+..-+.+.++|+|+.||.
T Consensus 141 ~~~~~~~~~g~~~~~~~~~~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~~----p~-~~~~~~A~~l~~~G~DvIiG~H~ 214 (239)
T smart00854 141 GWAASKDRPGVALLPDLDREKILADIARARK-KADVVIVSLHWGVEYQYE----PT-DEQRELAHALIDAGADVVIGHHP 214 (239)
T ss_pred CcccCCCCCCeeecCcCCHHHHHHHHHHHhc-cCCEEEEEecCccccCCC----CC-HHHHHHHHHHHHcCCCEEEcCCC
Confidence 10 011113334555555543 468899999966432111 11 12234444454568999999999
Q ss_pred cceeee
Q 017367 231 HAYERS 236 (373)
Q Consensus 231 H~~~r~ 236 (373)
|..+..
T Consensus 215 H~~~~~ 220 (239)
T smart00854 215 HVLQPI 220 (239)
T ss_pred CcCCce
Confidence 987654
No 113
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=96.87 E-value=0.025 Score=50.98 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=41.4
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 19 PKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
-.||+.++|.|...... .. -..-|+++++||.+. .|. ..+...+.+.+..|
T Consensus 61 ~~r~VcisdtH~~~~~i---~~--~p~gDvlihagdfT~------~g~------------------~~ev~~fn~~~gsl 111 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDI---ND--IPDGDVLIHAGDFTN------LGL------------------PEEVIKFNEWLGSL 111 (305)
T ss_pred ceEEEEecCcccccCcc---cc--CCCCceEEeccCCcc------ccC------------------HHHHHhhhHHhccC
Confidence 47999999999542211 11 246689999999993 233 11223344544444
Q ss_pred hcCCCeEEecCCCCcCCC
Q 017367 99 VSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~~~ 116 (373)
.-. =-++|.||||...+
T Consensus 112 ph~-yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 112 PHE-YKIVIAGNHELTFD 128 (305)
T ss_pred cce-eeEEEeeccceeec
Confidence 211 23689999998754
No 114
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=96.76 E-value=0.042 Score=49.36 Aligned_cols=187 Identities=17% Similarity=0.236 Sum_probs=88.8
Q ss_pred EEEecCCCCCCh---HHHHHHHHh-CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhh
Q 017367 23 AIVGDLGLTYNT---TCTINHMSS-NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNL 98 (373)
Q Consensus 23 ~~igD~h~~~~~---~~~l~~l~~-~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l 98 (373)
+++||+=..... ...|..|.+ .++||||..|..+.. |... ....+.+++
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~------G~Gi------------------t~~~~~~L~--- 53 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAG------GFGI------------------TPKIAEELF--- 53 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTT------TSS--------------------HHHHHHHH---
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCC------CCCC------------------CHHHHHHHH---
Confidence 467776322221 234455544 489999999999942 2210 011222222
Q ss_pred hcCCCeEEecCCCCcCCCCCCcchhhhhc---ccCCCCCCC-CCCCcceEEEEeCCEEEEEEccc--ccCCCChHHHHHH
Q 017367 99 VSKVPIMVVEGNHEIEAQAGNQTFVAYSS---RFAFPSEES-GSLSSFYYSFNAGGIHFIMLGAY--ISYDKSGHQYKWL 172 (373)
Q Consensus 99 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~---~~~~p~~~~-~~~~~~~ys~~~g~~~fi~ldt~--~~~~~~~~Q~~WL 172 (373)
..++-+ .+.|||=+.. .+. ..+.. +.-.|.|-+ +..+..|..++.++.++.++|-. ........-+.-+
T Consensus 54 ~~GvDv-iT~GNH~wdk---kei-~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~ 128 (253)
T PF13277_consen 54 KAGVDV-ITMGNHIWDK---KEI-FDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAA 128 (253)
T ss_dssp HHT-SE-EE--TTTTSS---TTH-HHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHH
T ss_pred hcCCCE-EecCcccccC---cHH-HHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHH
Confidence 225664 7899998753 122 22222 233344433 35677889999999887777643 2222222344455
Q ss_pred HHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEE
Q 017367 173 EKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHI 252 (373)
Q Consensus 173 ~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi 252 (373)
++.|++.. .+.+.+||=+|.=.. .+ +.-.-.+-+.+|.+|+.=|+|.... ...+-|+|+-||
T Consensus 129 d~~l~~l~-~~~~~iiVDFHAEaT---------SE---K~A~g~~lDGrvsaV~GTHTHVqTa-----DerILp~GTaYi 190 (253)
T PF13277_consen 129 DRLLEELK-EETDIIIVDFHAEAT---------SE---KQAMGWYLDGRVSAVVGTHTHVQTA-----DERILPGGTAYI 190 (253)
T ss_dssp HHHHHH------SEEEEEEE-S-H---------HH---HHHHHHHHBTTBSEEEEESSSS-BS-------EE-TTS-EEE
T ss_pred HHHHHhcc-ccCCEEEEEeecCcH---------HH---HHHHHHHhCCcEEEEEeCCCCccCc-----hhhccCCCCEEE
Confidence 55555543 456789998884211 11 2222344456899999999996321 222247899998
Q ss_pred E-eCCCCC
Q 017367 253 T-IGDGGN 259 (373)
Q Consensus 253 ~-~G~gG~ 259 (373)
+ +|.-|.
T Consensus 191 TDvGMtG~ 198 (253)
T PF13277_consen 191 TDVGMTGP 198 (253)
T ss_dssp S---EBEE
T ss_pred ecCccccC
Confidence 5 343343
No 115
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.71 E-value=0.022 Score=46.46 Aligned_cols=40 Identities=25% Similarity=0.437 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCccEEEeccccceeeeeecccCccCCCCCEEEEeCCCC
Q 017367 211 VEMEALLYSYGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDGG 258 (373)
Q Consensus 211 ~~l~~ll~~~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~gG 258 (373)
+.|.-|-++..||+.++||+|.++.+. .+|-.||..|++-
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye--------~eg~ffvnPGSaT 136 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE--------HEGKFFVNPGSAT 136 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE--------eCCcEEeCCCccc
Confidence 345556667799999999999999884 6788888888753
No 116
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=96.33 E-value=0.019 Score=56.26 Aligned_cols=41 Identities=32% Similarity=0.445 Sum_probs=31.5
Q ss_pred CeEEEEEecCCCCCCh---------HHHHHHHH----hCCCCEEEEcCcccccc
Q 017367 19 PKRIAIVGDLGLTYNT---------TCTINHMS----SNEPDLVLLVGDVTYAN 59 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~---------~~~l~~l~----~~~pd~vi~~GDl~y~~ 59 (373)
.+||++.+|.|+++.. -.+++.|. +.++|+||..|||++.+
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeN 66 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHEN 66 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccC
Confidence 5999999999988642 23444443 46999999999999754
No 117
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=96.25 E-value=0.0085 Score=56.18 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=25.2
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
+++++||+|..... .+.++.+.....+-++++||++.
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 68999999975433 22343332234589999999994
No 118
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=96.24 E-value=0.098 Score=47.61 Aligned_cols=136 Identities=12% Similarity=0.136 Sum_probs=76.4
Q ss_pred HHHHhhhhcCCCeEEecCCCCcCCCCCCcchh---hhhcccCCCCCCCCC---CCcceEEEEeCCEEEEEEcccccC---
Q 017367 92 GRFMQNLVSKVPIMVVEGNHEIEAQAGNQTFV---AYSSRFAFPSEESGS---LSSFYYSFNAGGIHFIMLGAYISY--- 162 (373)
Q Consensus 92 ~~~l~~l~~~~P~~~v~GNHD~~~~~~~~~~~---~~~~~~~~p~~~~~~---~~~~~ys~~~g~~~fi~ldt~~~~--- 162 (373)
.+.|..+ ++-++.+.-||-+.... +.+. ..++...++..+.+. .......++.+++++-++.-....
T Consensus 68 ~~~L~~~--G~d~vslANNH~~D~G~--~gl~~Tl~~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~ 143 (250)
T PF09587_consen 68 LDALKDA--GFDVVSLANNHIFDYGE--EGLLDTLEALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGY 143 (250)
T ss_pred HHHHHHc--CCCEEEecCCCCccccH--HHHHHHHHHHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCC
Confidence 3444444 77788888899775331 2221 122222333222111 112345677888777666532110
Q ss_pred --C------------------CChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCc
Q 017367 163 --D------------------KSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGV 222 (373)
Q Consensus 163 --~------------------~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v 222 (373)
. ....+.+.+.+++++++ ++.+++||+.|.-.-... ......+.+...+.+.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~-----~p~~~q~~~a~~lidaGa 217 (250)
T PF09587_consen 144 SSANGNRPYGFSYRPDKAGLNPNRPGIERIKEDIREAR-KKADVVIVSLHWGIEYEN-----YPTPEQRELARALIDAGA 217 (250)
T ss_pred ccccccccccccccccccccccccchHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC-----CCCHHHHHHHHHHHHcCC
Confidence 0 01234588888888887 567899999996422111 111233455556666799
Q ss_pred cEEEeccccceeeee
Q 017367 223 DIVFNGHVHAYERSN 237 (373)
Q Consensus 223 ~lvl~GH~H~~~r~~ 237 (373)
|+|+.+|.|..|-..
T Consensus 218 DiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 218 DIIIGHHPHVIQPVE 232 (250)
T ss_pred CEEEeCCCCcccceE
Confidence 999999999876654
No 119
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=96.03 E-value=0.012 Score=55.41 Aligned_cols=23 Identities=13% Similarity=0.192 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++.+.++++=||.=.
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He~v 275 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHECK 275 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 56788999999999999999853
No 120
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=96.02 E-value=0.016 Score=53.52 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=26.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 20 KRIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 20 ~r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
-+++++||+|..... .++++.+.....+-++++||++.
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VD 66 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVD 66 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccC
Confidence 378999999975433 22444333346688999999994
No 121
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=95.85 E-value=0.015 Score=53.96 Aligned_cols=23 Identities=13% Similarity=0.222 Sum_probs=20.0
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+++.+.+++.+.++++=||.-.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCccc
Confidence 46788999999999999999854
No 122
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=95.71 E-value=0.016 Score=53.98 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=25.0
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNT-TCTINHMSSNEPDLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~-~~~l~~l~~~~pd~vi~~GDl~y 57 (373)
+++++||+|..... .+.++.......+-+|++||++.
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 88 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVD 88 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEec
Confidence 68999999975432 23444333335578999999994
No 123
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=95.69 E-value=0.019 Score=53.67 Aligned_cols=23 Identities=4% Similarity=0.033 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++.+.++++=||.-.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 46788999999999999999854
No 124
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=95.46 E-value=0.032 Score=53.52 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=19.2
Q ss_pred HHHHHHHHHHcCccEEEeccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHV 230 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~ 230 (373)
.+.+.+.|++.+.++++=||.
T Consensus 273 ~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 273 PDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHHcCCcEEEECCC
Confidence 577889999999999999998
No 125
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=95.15 E-value=0.34 Score=48.47 Aligned_cols=57 Identities=18% Similarity=0.173 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHH-HHHHHHHHc-CccE-EEecccccee
Q 017367 166 GHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRV-EMEALLYSY-GVDI-VFNGHVHAYE 234 (373)
Q Consensus 166 ~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~-~l~~ll~~~-~v~l-vl~GH~H~~~ 234 (373)
-.|.+|-.+.++. ...+.+|+++|.|..... .++ .+.++.+.+ ++++ ||-||.|...
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~~---------e~~~~~~~ir~~~p~t~IqviGGHshird 270 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD---------EWKSLHAEIRKVHPNTPIQVIGGHSHIRD 270 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccch---------hhhhHHHHHhhhCCCCceEEECchhhhhh
Confidence 4567787777766 355679999999974321 112 333344444 6777 9999999744
No 126
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=95.12 E-value=0.033 Score=51.87 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=19.8
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++.+.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 46788999999999999999853
No 127
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=95.07 E-value=0.04 Score=51.82 Aligned_cols=23 Identities=13% Similarity=0.238 Sum_probs=20.1
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 57788999999999999999854
No 128
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=94.61 E-value=0.076 Score=50.01 Aligned_cols=23 Identities=9% Similarity=0.105 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+.+++.+.++++-||.=.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 46788899999999999999854
No 129
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=94.48 E-value=0.1 Score=49.19 Aligned_cols=21 Identities=10% Similarity=0.230 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCccEEEeccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHV 230 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~ 230 (373)
.+++.+.+++.+.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467888999999999999997
No 130
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=93.51 E-value=0.048 Score=48.12 Aligned_cols=83 Identities=12% Similarity=0.279 Sum_probs=42.8
Q ss_pred EEEEecCCCCCCh--HHHHHHH----H-hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH---HHHHH
Q 017367 22 IAIVGDLGLTYNT--TCTINHM----S-SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP---RWDYW 91 (373)
Q Consensus 22 ~~~igD~h~~~~~--~~~l~~l----~-~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~---~~~~~ 91 (373)
|+++||.+...+. -+.++.+ . +.+|+.+|++|+++.......... .....+.. ....+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 68 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSG------------SVPDSYSFEEDFLKEL 68 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---------------HHCCHHHHHHHHC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccc------------cccccccccHHHHHHH
Confidence 6899999987432 2233333 3 567999999999996422110000 00001111 12233
Q ss_pred HHHHhhhhcCCCeEEecCCCCcCCC
Q 017367 92 GRFMQNLVSKVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 92 ~~~l~~l~~~~P~~~v~GNHD~~~~ 116 (373)
.+.+..+...++++.+||+||....
T Consensus 69 ~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 69 DSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHhhcccccEEEEeCCCcccccc
Confidence 4445556678999999999998643
No 131
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=88.20 E-value=2.5 Score=39.04 Aligned_cols=80 Identities=13% Similarity=0.213 Sum_probs=49.9
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHh------------CCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchH
Q 017367 19 PKRIAIVGDLGLTYNTTCTINHMSS------------NEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQP 86 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~~l~~------------~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~ 86 (373)
..+|+++||.|+.. .+++++|.+ ..|-.+|+.|+++..-.. .+. ...+.|..
T Consensus 27 ~~~~VilSDV~LD~--p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~--~~~------------~~~~~yk~ 90 (291)
T PTZ00235 27 RHNWIIMHDVYLDS--PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFD--YNR------------NFHKVYIK 90 (291)
T ss_pred ceEEEEEEeeccCC--HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCccc--CCC------------CchHHHHH
Confidence 47999999999853 333333321 138899999999953110 000 12234665
Q ss_pred HHHHHHH-HHh---hhhcCCCeEEecCCCCcC
Q 017367 87 RWDYWGR-FMQ---NLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 87 ~~~~~~~-~l~---~l~~~~P~~~v~GNHD~~ 114 (373)
.++.+.. ++. .+..+.-+++|||-.|-+
T Consensus 91 ~Fd~La~llls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 91 GFEKLSVMLISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHHHHHHHHHhChHHHhcCeEEEECCCCCCC
Confidence 5666654 233 345678899999999975
No 132
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=77.39 E-value=5.2 Score=35.88 Aligned_cols=36 Identities=17% Similarity=0.358 Sum_probs=21.0
Q ss_pred EEEEecCCCCCChHHHHHHHHhCCC-CEEEEcCcccc
Q 017367 22 IAIVGDLGLTYNTTCTINHMSSNEP-DLVLLVGDVTY 57 (373)
Q Consensus 22 ~~~igD~h~~~~~~~~l~~l~~~~p-d~vi~~GDl~y 57 (373)
+.+.||+|..+...-.+-++-..-| .=-+++||++.
T Consensus 45 vtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 45 VTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 5678999976433222222222222 35789999994
No 133
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=75.78 E-value=2.9 Score=39.65 Aligned_cols=23 Identities=13% Similarity=0.244 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+++++.++++++-+|.=.
T Consensus 233 ~~~v~~f~~~~~ldlivRaHqvv 255 (331)
T KOG0374|consen 233 PAVVEDFCKKLDLDLIVRAHQVV 255 (331)
T ss_pred HHHHHHHHHHhCcceEEEcCccc
Confidence 46788889999999999998643
No 134
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=67.13 E-value=9.9 Score=34.41 Aligned_cols=35 Identities=23% Similarity=0.436 Sum_probs=22.7
Q ss_pred EEEEEecCCCCCChHHHHH--HHHhCCCCE-EEEcCcccc
Q 017367 21 RIAIVGDLGLTYNTTCTIN--HMSSNEPDL-VLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~~~~l~--~l~~~~pd~-vi~~GDl~y 57 (373)
-+.+.||.|..+. ..++ +|-...||. .++.||.+.
T Consensus 61 pvtvcGDvHGqf~--dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 61 PVTVCGDVHGQFH--DLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred ceEEecCcchhHH--HHHHHHHccCCCCCcceeeeeeecc
Confidence 3678899997543 2333 333345664 788999994
No 135
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=64.27 E-value=16 Score=32.33 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=19.8
Q ss_pred EEEEecCCCCCChHHHHHHHH--hCCCC-EEEEcCcccc
Q 017367 22 IAIVGDLGLTYNTTCTINHMS--SNEPD-LVLLVGDVTY 57 (373)
Q Consensus 22 ~~~igD~h~~~~~~~~l~~l~--~~~pd-~vi~~GDl~y 57 (373)
+-+.||+|..+.. .++-.. -.-|| --|+.||++.
T Consensus 48 VTvCGDIHGQFyD--L~eLFrtgG~vP~tnYiFmGDfVD 84 (306)
T KOG0373|consen 48 VTVCGDIHGQFYD--LLELFRTGGQVPDTNYIFMGDFVD 84 (306)
T ss_pred eeEeeccchhHHH--HHHHHHhcCCCCCcceEEeccccc
Confidence 4568999975422 222221 13344 3688999994
No 136
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.76 E-value=38 Score=33.33 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=27.3
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHh-----CCCCEEEEcCcccc
Q 017367 19 PKRIAIVGDLGLTYNTTCTINHMSS-----NEPDLVLLVGDVTY 57 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~~l~~-----~~pd~vi~~GDl~y 57 (373)
+.||+++||.-. +....+++|.+ ...|++|++|++.-
T Consensus 5 ~~kILv~Gd~~G--r~~eli~rI~~v~Kk~GpFd~liCvGnfF~ 46 (528)
T KOG2476|consen 5 DAKILVCGDVEG--RFDELIKRIQKVNKKSGPFDLLICVGNFFG 46 (528)
T ss_pred CceEEEEcCccc--cHHHHHHHHHHHhhcCCCceEEEEecccCC
Confidence 469999999864 44555555542 25899999999993
No 137
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=44.77 E-value=18 Score=31.97 Aligned_cols=29 Identities=21% Similarity=0.256 Sum_probs=19.4
Q ss_pred cCccEEEeccccceeeeeecccCccCCCCCEEEEeCC
Q 017367 220 YGVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGD 256 (373)
Q Consensus 220 ~~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~ 256 (373)
.+++++++||+|.-... ..++.+.|-+|+
T Consensus 178 ~~~~~vv~GHTh~~~~~--------~~~~~i~IDtGs 206 (218)
T PRK09968 178 NGADYFIFGHMMFDNIQ--------TFANQIYIDTGS 206 (218)
T ss_pred CCCCEEEECCCCcCcce--------eECCEEEEECCC
Confidence 35789999999974332 123567777775
No 138
>COG2843 PgsA Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]
Probab=40.81 E-value=65 Score=31.09 Aligned_cols=62 Identities=13% Similarity=0.135 Sum_probs=39.5
Q ss_pred HHHHHHHHhhccCCCCCeEEEEeCCCC-cCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccceeeee
Q 017367 169 YKWLEKDLANVDRSVTPWLVATWHPPW-YSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYERSN 237 (373)
Q Consensus 169 ~~WL~~~L~~~~~~~~~~iIv~~H~P~-~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~r~~ 237 (373)
.+-+..+++.+++ ....+|++.|+-. |... ....+..|..-+...++++++.+|-|..|-..
T Consensus 210 ~~~~~~~v~~a~k-~adlviv~~HwG~ey~~~------p~~~q~~~a~~lidAGa~iIvGhhpHvlqpiE 272 (372)
T COG2843 210 LERVLAAVLAAKK-GADLVIVQPHWGVEYAYE------PAAGQRALARRLIDAGADIIVGHHPHVLQPIE 272 (372)
T ss_pred hhhhHHHHHhhhc-cCCEEEEeccccccccCC------CcHHHHHHHHHHHhcCcCeEecCCCCcCcceE
Confidence 4445555555553 4567889888732 2221 11224556666667899999999999877654
No 139
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=40.57 E-value=35 Score=32.47 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=20.1
Q ss_pred EEEEEecCCCCCChHHHHHHHHh-CCC--CEEEEcCcccc
Q 017367 21 RIAIVGDLGLTYNTTCTINHMSS-NEP--DLVLLVGDVTY 57 (373)
Q Consensus 21 r~~~igD~h~~~~~~~~l~~l~~-~~p--d~vi~~GDl~y 57 (373)
-|-+.||+|..+- ..++-.+- ..| ---+++||++.
T Consensus 89 PiTVCGDIHGQf~--DLmKLFEVGG~PA~t~YLFLGDYVD 126 (517)
T KOG0375|consen 89 PITVCGDIHGQFF--DLMKLFEVGGSPANTRYLFLGDYVD 126 (517)
T ss_pred CeeEecccchHHH--HHHHHHHccCCcccceeEeeccccc
Confidence 3567899996532 22222221 122 34789999995
No 140
>PHA03008 hypothetical protein; Provisional
Probab=38.69 E-value=63 Score=28.05 Aligned_cols=43 Identities=2% Similarity=-0.021 Sum_probs=28.2
Q ss_pred EEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecccccee
Q 017367 187 LVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 187 iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
-|++.|.|++.......+ .+.|.+-+.+-++.+.++||.-.|.
T Consensus 163 DILITHgPP~GhLD~~vG-----C~~Ll~~I~rVKPKyHVFGh~~~~~ 205 (234)
T PHA03008 163 DILITASPPFAILDDDLA-----CGDLFSKVIKIKPKFHIFNGLTQFS 205 (234)
T ss_pred CEEEeCCCCccccccccC-----cHHHHHHHHHhCCcEEEeCCccccC
Confidence 388899999876533211 2344444556689999999965543
No 141
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=37.14 E-value=1.8e+02 Score=22.28 Aligned_cols=23 Identities=9% Similarity=0.063 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCccEEEeccccc
Q 017367 210 RVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 210 ~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
.+.+.+..+++++++++.|+.+.
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~ 96 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRR 96 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 36677888899999999888764
No 142
>PF01784 NIF3: NIF3 (NGG1p interacting factor 3); InterPro: IPR002678 This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown [][].; PDB: 1NMO_F 1NMP_B 2GX8_C 2FYW_B 2NYD_A 3LNL_A 2YYB_A 3RXY_F.
Probab=36.89 E-value=52 Score=29.60 Aligned_cols=43 Identities=16% Similarity=0.255 Sum_probs=20.0
Q ss_pred EEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccc
Q 017367 188 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 188 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~ 232 (373)
+++.|||++-.............+.+..+++ +++ .+++-|+..
T Consensus 56 lIItHHP~~f~~~~~~~~~~~~~~~~~~li~-~~I-~vy~~Ht~l 98 (241)
T PF01784_consen 56 LIITHHPLFFKPLKSLTGDDYKGKIIEKLIK-NGI-SVYSAHTNL 98 (241)
T ss_dssp EEEESS-SSSSTSSHCHCHSHHHHHHHHHHH-TT--EEEEESHHH
T ss_pred EEEEcCchhhcCCccccccchhhHHHHHHHH-CCC-EEEEecccc
Confidence 5566778654322211112123344444444 566 567778775
No 143
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=34.21 E-value=33 Score=35.15 Aligned_cols=43 Identities=26% Similarity=0.387 Sum_probs=28.0
Q ss_pred hCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCCcC
Q 017367 43 SNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHEIE 114 (373)
Q Consensus 43 ~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~ 114 (373)
+.-+|-+-++||+.. .|..+ ..+|..|...--+=.-+||||+.
T Consensus 182 rL~VDhLHIvGDIyD------RGp~p-----------------------d~ImD~Lm~~hsvDIQWGNHDIl 224 (640)
T PF06874_consen 182 RLAVDHLHIVGDIYD------RGPRP-----------------------DKIMDRLMNYHSVDIQWGNHDIL 224 (640)
T ss_pred HHhhhheeecccccC------CCCCh-----------------------hHHHHHHhcCCCccccccchHHH
Confidence 457899999999994 45421 23344443333455778999975
No 144
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=32.50 E-value=1.5e+02 Score=27.11 Aligned_cols=39 Identities=18% Similarity=0.328 Sum_probs=31.7
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCccccc
Q 017367 19 PKRIAIVGDLGLTYNTTCTINHMSSNEPDLVLLVGDVTYA 58 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~~l~~~~pd~vi~~GDl~y~ 58 (373)
..+|++.||.+.- .....++.+.+.+|+++|+.|=.+|-
T Consensus 176 ~~~i~faSDvqGp-~~~~~l~~i~e~~P~v~ii~GPpty~ 214 (304)
T COG2248 176 KSSIVFASDVQGP-INDEALEFILEKRPDVLIIGGPPTYL 214 (304)
T ss_pred CeEEEEcccccCC-CccHHHHHHHhcCCCEEEecCCchhH
Confidence 4689999998753 34557888888999999999999964
No 145
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=32.00 E-value=41 Score=29.71 Aligned_cols=29 Identities=28% Similarity=0.264 Sum_probs=19.8
Q ss_pred CccEEEeccccceeeeeecccCccCCCCCEEEEeCCC
Q 017367 221 GVDIVFNGHVHAYERSNRVFNYTLDPCGPVHITIGDG 257 (373)
Q Consensus 221 ~v~lvl~GH~H~~~r~~p~~~~~~~~~g~~yi~~G~g 257 (373)
+.+++++||+|..... ..+..+.|-+|+.
T Consensus 179 ~~~~vv~GHT~~~~~~--------~~~~~i~IDtGav 207 (218)
T PRK11439 179 GADHFWFGHTPLRHRV--------DIGNLHYIDTGAV 207 (218)
T ss_pred CCCEEEECCccCCCcc--------ccCCEEEEECCCC
Confidence 5578999999985432 2345677777763
No 146
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=29.44 E-value=2.4e+02 Score=20.93 Aligned_cols=24 Identities=13% Similarity=0.268 Sum_probs=21.0
Q ss_pred ChHHHHHHHHhCCCCEEEEcCccc
Q 017367 33 NTTCTINHMSSNEPDLVLLVGDVT 56 (373)
Q Consensus 33 ~~~~~l~~l~~~~pd~vi~~GDl~ 56 (373)
...++++.|.+....+|++++|.-
T Consensus 17 G~kqt~Kai~kg~~~~v~iA~Da~ 40 (84)
T PRK13600 17 GLKETLKALKKDQVTSLIIAEDVE 40 (84)
T ss_pred eHHHHHHHHhcCCceEEEEeCCCC
Confidence 456788999889999999999987
No 147
>KOG3818 consensus DNA polymerase epsilon, subunit B [Replication, recombination and repair]
Probab=27.52 E-value=3.4e+02 Score=26.86 Aligned_cols=37 Identities=16% Similarity=0.293 Sum_probs=26.4
Q ss_pred CeEEEEEecCCCCCChHHHHHHHH-------hCCCCEEEEcCcccc
Q 017367 19 PKRIAIVGDLGLTYNTTCTINHMS-------SNEPDLVLLVGDVTY 57 (373)
Q Consensus 19 ~~r~~~igD~h~~~~~~~~l~~l~-------~~~pd~vi~~GDl~y 57 (373)
.-+|+++||.++.. .++|+++. ...|-.||+.|-+..
T Consensus 282 d~~fVfLSdV~LD~--~~vm~aL~kifqgy~~~pP~~iIlcG~FtS 325 (525)
T KOG3818|consen 282 DTSFVFLSDVFLDD--KKVMEALRKIFQGYKDAPPTAIILCGSFTS 325 (525)
T ss_pred CceEEEEehhcccc--HHHHHHHHHHHhhccCCCCeEEEEeccccc
Confidence 46899999999753 33343332 247889999999984
No 148
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=26.57 E-value=82 Score=28.68 Aligned_cols=64 Identities=19% Similarity=0.175 Sum_probs=38.0
Q ss_pred EEEcccccCCCChHHHHHHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEeccccce
Q 017367 154 IMLGAYISYDKSGHQYKWLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAY 233 (373)
Q Consensus 154 i~ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~ 233 (373)
|+||-.........|.++++++|+-+.+-+.|.+ .|..- . .+.+.++++++++. ..|..|.|
T Consensus 98 iGLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~Pv~---iH~r~-----a--------~~~~~~il~~~~~~--~~~i~H~f 159 (258)
T PRK11449 98 IGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVI---LHSRR-----T--------HDKLAMHLKRHDLP--RTGVVHGF 159 (258)
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHhCCCEE---EEecC-----c--------cHHHHHHHHhcCCC--CCeEEEcC
Confidence 5566432222346799999999998876666622 35431 1 14566778877542 24567765
Q ss_pred ee
Q 017367 234 ER 235 (373)
Q Consensus 234 ~r 235 (373)
.-
T Consensus 160 sG 161 (258)
T PRK11449 160 SG 161 (258)
T ss_pred CC
Confidence 43
No 149
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=26.49 E-value=78 Score=30.21 Aligned_cols=44 Identities=23% Similarity=0.327 Sum_probs=23.1
Q ss_pred CCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecc
Q 017367 183 VTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGH 229 (373)
Q Consensus 183 ~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH 229 (373)
..+++++..|..-... .......+.+.+..+.+..++.+++..|
T Consensus 179 ~~~~iLvt~H~~t~~~---~~~~~~~i~~~l~~L~~~~~~~vi~~~h 222 (346)
T PF02350_consen 179 PKPYILVTLHPVTNED---NPERLEQILEALKALAERQNVPVIFPLH 222 (346)
T ss_dssp TSEEEEEE-S-CCCCT---HH--HHHHHHHHHHHHHHTTEEEEEE--
T ss_pred CCCEEEEEeCcchhcC---ChHHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 4567888777654221 0111234456666666666788889888
No 150
>PRK01018 50S ribosomal protein L30e; Reviewed
Probab=24.18 E-value=3.2e+02 Score=20.72 Aligned_cols=23 Identities=17% Similarity=0.343 Sum_probs=19.2
Q ss_pred hHHHHHHHHhCCCCEEEEcCccc
Q 017367 34 TTCTINHMSSNEPDLVLLVGDVT 56 (373)
Q Consensus 34 ~~~~l~~l~~~~pd~vi~~GDl~ 56 (373)
...+++.+.+.+.-+||++.|..
T Consensus 21 ~~~v~kai~~gkaklViiA~D~~ 43 (99)
T PRK01018 21 SKRTIKAIKLGKAKLVIVASNCP 43 (99)
T ss_pred HHHHHHHHHcCCceEEEEeCCCC
Confidence 35678888888999999999964
No 151
>COG3931 Predicted N-formylglutamate amidohydrolase [Amino acid transport and metabolism]
Probab=24.08 E-value=1.7e+02 Score=26.33 Aligned_cols=12 Identities=42% Similarity=0.545 Sum_probs=9.9
Q ss_pred CeEEecCCCCcC
Q 017367 103 PIMVVEGNHEIE 114 (373)
Q Consensus 103 P~~~v~GNHD~~ 114 (373)
-.+.|||||++.
T Consensus 101 e~~~VPgN~~ls 112 (263)
T COG3931 101 EGTVVPGNHPLS 112 (263)
T ss_pred cceeccCCCCCC
Confidence 458999999984
No 152
>PRK10799 metal-binding protein; Provisional
Probab=22.74 E-value=1.8e+02 Score=26.23 Aligned_cols=44 Identities=11% Similarity=0.065 Sum_probs=21.5
Q ss_pred EEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCccEEEecccccee
Q 017367 188 VATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVDIVFNGHVHAYE 234 (373)
Q Consensus 188 Iv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~lvl~GH~H~~~ 234 (373)
+++.|||++-........ .........+.++++ .+++-|++.-.
T Consensus 59 lIitHHP~~~~~~~~~~~--~~~~~~~~~li~~~i-~vy~~Htn~D~ 102 (247)
T PRK10799 59 AVIVHHGYFWKGESPVIR--GMKRNRLKTLLANDI-NLYGWHLPLDA 102 (247)
T ss_pred EEEECCchhccCCCcccc--chHHHHHHHHHHCCC-eEEEEecchhh
Confidence 445688865332211111 122233344455565 56788888643
No 153
>PF00072 Response_reg: Response regulator receiver domain; InterPro: IPR001789 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Bipartite response regulator proteins are involved in a two-component signal transduction system in bacteria, and certain eukaryotes like protozoa, that functions to detect and respond to environmental changes []. These systems have been detected during host invasion, drug resistance, motility, phosphate uptake, osmoregulation, and nitrogen fixation, amongst others []. The two-component system consists of a histidine protein kinase environmental sensor that phosphorylates the receiver domain of a response regulator protein; phosphorylation induces a conformational change in the response regulator, which activates the effector domain, triggering the cellular response []. The domains of the two-component proteins are highly modular, but the core structures and activities are maintained. The response regulators act as phosphorylation-activated switches to affect a cellular response, usually by transcriptional regulation. Most of these proteins consist of two domains, an N-terminal response regulator receiver domain, and a variable C-terminal effector domain with DNA-binding activity. This entry represents the response regulator receiver domain, which belongs to the CheY family, and receives the signal from the sensor partner in the two-component system.; GO: 0000156 two-component response regulator activity, 0000160 two-component signal transduction system (phosphorelay), 0006355 regulation of transcription, DNA-dependent; PDB: 2QR3_A 2QXY_A 1I3C_A 1JLK_A 2PKX_A 2PL1_A 3H1F_A 3H1E_A 3GWG_A 3H1G_A ....
Probab=22.72 E-value=2.5e+02 Score=20.73 Aligned_cols=53 Identities=13% Similarity=0.247 Sum_probs=35.8
Q ss_pred ChHHHHHHHHhCCCCEEEEcCccccccccccCCCCCCccccCCCCCCCcccchHHHHHHHHHHhhhhcCCCeEEecCCCC
Q 017367 33 NTTCTINHMSSNEPDLVLLVGDVTYANLYLTNGTGSDCYSCSFSKTPIHETYQPRWDYWGRFMQNLVSKVPIMVVEGNHE 112 (373)
Q Consensus 33 ~~~~~l~~l~~~~pd~vi~~GDl~y~~~~~~~g~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~l~~~~P~~~v~GNHD 112 (373)
+...+++.+.+..||++++--++...+ ...+.+.++......|++++..++|
T Consensus 31 ~~~~~~~~~~~~~~d~iiid~~~~~~~----------------------------~~~~~~~i~~~~~~~~ii~~t~~~~ 82 (112)
T PF00072_consen 31 SGEEALELLKKHPPDLIIIDLELPDGD----------------------------GLELLEQIRQINPSIPIIVVTDEDD 82 (112)
T ss_dssp SHHHHHHHHHHSTESEEEEESSSSSSB----------------------------HHHHHHHHHHHTTTSEEEEEESSTS
T ss_pred CHHHHHHHhcccCceEEEEEeeecccc----------------------------ccccccccccccccccEEEecCCCC
Confidence 356778888888999999988777321 1123444444446788888887776
Q ss_pred c
Q 017367 113 I 113 (373)
Q Consensus 113 ~ 113 (373)
.
T Consensus 83 ~ 83 (112)
T PF00072_consen 83 S 83 (112)
T ss_dssp H
T ss_pred H
Confidence 4
No 154
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=22.45 E-value=1.6e+02 Score=26.62 Aligned_cols=18 Identities=11% Similarity=0.337 Sum_probs=11.2
Q ss_pred HHHHHHcCccEEEeccccc
Q 017367 214 EALLYSYGVDIVFNGHVHA 232 (373)
Q Consensus 214 ~~ll~~~~v~lvl~GH~H~ 232 (373)
...+.++++ .+++-|+..
T Consensus 84 ~~~li~~~I-~vy~~Ht~l 101 (249)
T TIGR00486 84 LKILLQNDI-SLYSAHTNL 101 (249)
T ss_pred HHHHHHCCC-eEEEeecch
Confidence 344566666 567777765
No 155
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=21.53 E-value=99 Score=28.55 Aligned_cols=49 Identities=27% Similarity=0.313 Sum_probs=31.0
Q ss_pred HHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCcc-EEEeccccc
Q 017367 171 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVD-IVFNGHVHA 232 (373)
Q Consensus 171 WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~-lvl~GH~H~ 232 (373)
.|+..|+..++-..| ..-.|.| ...+-+.+.+||+++++| +||+||.-.
T Consensus 117 YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 117 YLNKCLKVYKQLGIP--AVGIHVP-----------EKEQPEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHHHHHHHHHHcCCc--eEEEEec-----------hHHhhHHHHHHHHHcCCCEEEEeCchhh
Confidence 477777765433332 3333322 223457889999999887 569999874
No 156
>PF04683 Proteasom_Rpn13: Proteasome complex subunit Rpn13 ubiquitin receptor; InterPro: IPR006773 This family was thought originally to be involved in cell-adhesion [, ], but the members are now known to be proteasome subunit Rpn13, a novel ubiquitin receptor. The 26S proteasome is a huge macromolecular protein-degradation machine consisting of a proteolytically active 20S core, in the form of four disc-like proteins, and one or two 19S regulatory particles. The regulatory particle(s) sit on the top and or bottom of the core, de-ubiquitinate the substrate peptides, unfold them and guide them into the narrow channel through the centre of the core. Rpn13 and its homologues dock onto the regulatory particle through the N-terminal region which binds Rpn2. The C-terminal part of the domain binds de-ubiquitinating enzyme Uch37/UCHL5 and enhances its isopeptidase activity. Rpn13 binds ubiquitin via a conserved amino-terminal region called the pleckstrin-like receptor for ubiquitin, termed Pru, domain []. The domain forms two contiguous anti-parallel beta-sheets with a configuration similar to the pleckstrin-homology domain (PHD) fold []. Rpn13's ability to bind ubiquitin and the proteasome subunit Rpn2/S1 simultaneously supports evidence of its role as a ubiquitin receptor. Finally, when complexed to di-ubiquitin, via the Pru, and Uch37 via the C-terminal part, it frees up the distal ubiquitin for de-ubiquitination by the Uch37 []. ; GO: 0005634 nucleus, 0005737 cytoplasm; PDB: 2Z4D_A 2KR0_A 2Z59_A 2R2Y_A.
Probab=21.04 E-value=3e+02 Score=20.36 Aligned_cols=36 Identities=14% Similarity=0.255 Sum_probs=23.1
Q ss_pred ceeEEEEEecCCeEEEEEEEecCCCceeeEEEEEEeC
Q 017367 318 FGHGILEVKNETWALWTWHRNQDSNNKVGDQIYIVRQ 354 (373)
Q Consensus 318 ~Gy~~l~v~~~t~l~~~~~~~~~~~~~v~d~~~i~k~ 354 (373)
-|+..|....++.++++|...++. +++-|++.|.-.
T Consensus 16 KG~l~l~~~~d~l~~f~W~~r~~~-~~~e~d~il~pg 51 (85)
T PF04683_consen 16 KGLLYLYKSEDGLLHFCWKPRDTT-GEVEDDLILFPG 51 (85)
T ss_dssp -EEEEEEETTTS-EEEEEEETST----EEEEEEE-TT
T ss_pred CEEEEEEECCCCeEEEEEEEcCcC-CCcccceecCCC
Confidence 488888775568899999976651 378888887544
No 157
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=20.76 E-value=1.3e+02 Score=27.04 Aligned_cols=16 Identities=38% Similarity=0.654 Sum_probs=13.2
Q ss_pred CCCeEEecCCCCcCCC
Q 017367 101 KVPIMVVEGNHEIEAQ 116 (373)
Q Consensus 101 ~~P~~~v~GNHD~~~~ 116 (373)
+..+.+..||||...+
T Consensus 127 nknvvvlagnhein~n 142 (318)
T PF13258_consen 127 NKNVVVLAGNHEINFN 142 (318)
T ss_pred ccceEEEecCceeccC
Confidence 5678999999999754
No 158
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=20.74 E-value=3.3e+02 Score=22.33 Aligned_cols=10 Identities=30% Similarity=0.468 Sum_probs=6.8
Q ss_pred CCCCEEEEcC
Q 017367 44 NEPDLVLLVG 53 (373)
Q Consensus 44 ~~pd~vi~~G 53 (373)
.+||.|++..
T Consensus 49 ~~p~~vvi~~ 58 (171)
T cd04502 49 YQPRRVVLYA 58 (171)
T ss_pred CCCCEEEEEE
Confidence 4888776644
No 159
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=20.54 E-value=86 Score=28.78 Aligned_cols=49 Identities=24% Similarity=0.214 Sum_probs=30.6
Q ss_pred HHHHHHhhccCCCCCeEEEEeCCCCcCCCCCCccchHHHHHHHHHHHHHcCcc-EEEeccccc
Q 017367 171 WLEKDLANVDRSVTPWLVATWHPPWYSSYSSHYREAECMRVEMEALLYSYGVD-IVFNGHVHA 232 (373)
Q Consensus 171 WL~~~L~~~~~~~~~~iIv~~H~P~~~~~~~~~~~~~~~~~~l~~ll~~~~v~-lvl~GH~H~ 232 (373)
+|+..|+..++-..| ++-.|.|- ..+-+.+.+|++++++| +||.||.-.
T Consensus 116 YL~~Cl~~Ykql~i~--a~G~~~~E-----------~eqp~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 116 YLRKCLKLYKKIGVP--VVGIHCKE-----------KEMPEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHhCCc--eEEEEecc-----------hhchHHHHHHHHHhCCCEEEEeCchhh
Confidence 477777765433333 33333221 12346788999999887 569999854
Done!