BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017370
MEIPLASLTSSRATTTTSLKLNGGLGRELCVSKKGTVKSGPNQMRWCVRASAERSRSNED
IKNSDNSRFTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMALAGRFI
CSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDVEDEELR
SFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASLTGVLPP
FVPFAQAFAAVITAALTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAWYERRQM
KKIYSPLLEGLLALYLGFEWIQTNNILAPIITHGIYSAVILGHGLWKIHDHRRRLHQRIQ
RLELEGNDSDRK

High Scoring Gene Products

Symbol, full name Information P value
AT2G35260 protein from Arabidopsis thaliana 4.3e-109
AT4G17840 protein from Arabidopsis thaliana 1.9e-99

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017370
        (372 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2063484 - symbol:AT2G35260 "AT2G35260" species...  1078  4.3e-109  1
TAIR|locus:2141000 - symbol:AT4G17840 "AT4G17840" species...   987  1.9e-99   1


>TAIR|locus:2063484 [details] [associations]
            symbol:AT2G35260 "AT2G35260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0010155 "regulation of proton transport"
            evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
            evidence=RCA] [GO:0046777 "protein autophosphorylation"
            evidence=RCA] InterPro:IPR003675 Pfam:PF02517 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0016020 EMBL:AC004667 EMBL:AF361619
            EMBL:AY081832 IPI:IPI00545114 PIR:D84766 RefSeq:NP_565802.1
            UniGene:At.24777 STRING:O82167 PaxDb:O82167 PRIDE:O82167
            EnsemblPlants:AT2G35260.1 GeneID:818093 KEGG:ath:AT2G35260
            TAIR:At2g35260 eggNOG:NOG279687 HOGENOM:HOG000005905
            InParanoid:O82167 OMA:RFICSVT PhylomeDB:O82167
            ProtClustDB:CLSN2688697 ArrayExpress:O82167 Genevestigator:O82167
            Uniprot:O82167
        Length = 382

 Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
 Identities = 211/309 (68%), Positives = 240/309 (77%)

Query:    48 VRASAERSRSNEDIKNSDN---------SRFTGSVMEVTTFDRGFGQPAASDFPVWDKIG 98
             V ASAERS    + K +D           RF G+ MEVTT DRGF      DFP+WDKIG
Sbjct:    53 VIASAERSSEGIE-KTTDTVGGGGGGGAGRFAGTAMEVTTLDRGFANSTTVDFPIWDKIG 111

Query:    99 AIVRLSYGIGIYGAMALAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILD 158
             A+VRL+YGIGIYGAMA+AGRFICS+TG+DS GGF PSLDA++ GLGYA PPIMALLFILD
Sbjct:   112 AVVRLTYGIGIYGAMAVAGRFICSVTGIDSSGGFDPSLDALLAGLGYATPPIMALLFILD 171

Query:   159 DEVVKLSPHARAIRDVEDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIF 218
             DEVVKLSPHARAIRDVEDEELRSFF+GMSPWQF+LIVAASS+GEELFYR AVQGAL+DIF
Sbjct:   172 DEVVKLSPHARAIRDVEDEELRSFFFGMSPWQFILIVAASSIGEELFYRVAVQGALSDIF 231

Query:   219 LRGTDFLTDAQGMASLTGXXXXXXXXXXXXXXXXXXXLTGSLYYVATSPKDPTYVVAPVL 278
             L+GT  +TD++GMASLTG                   LTGSLY++A SPKDPTY+VAPVL
Sbjct:   232 LKGTQLMTDSRGMASLTGVFPPFVPFAEVFAAVITATLTGSLYFLAASPKDPTYIVAPVL 291

Query:   279 RSRSGREDLKKLFAAWYERRQMKKIYSPXXXXXXXXXXGFEWIQTNNILAPIITHGIYSA 338
             RSR  R+D KKL +AWYE+RQMKKIYSP          G EW+QT+NILAP++THGIYSA
Sbjct:   292 RSR--RDDFKKLLSAWYEKRQMKKIYSPLLEGLLALYLGIEWVQTDNILAPMMTHGIYSA 349

Query:   339 VILGHGLWK 347
             VILGHGLWK
Sbjct:   350 VILGHGLWK 358


>TAIR|locus:2141000 [details] [associations]
            symbol:AT4G17840 "AT4G17840" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0016020 "membrane" evidence=IEA]
            InterPro:IPR003675 Pfam:PF02517 EMBL:CP002687 GO:GO:0016020
            ProtClustDB:CLSN2688697 EMBL:BT026482 EMBL:AK229659 IPI:IPI00538542
            RefSeq:NP_567542.1 UniGene:At.48873 UniGene:At.63702 STRING:Q0WMZ7
            EnsemblPlants:AT4G17840.1 GeneID:827507 KEGG:ath:AT4G17840
            TAIR:At4g17840 eggNOG:NOG270359 InParanoid:Q0WMZ7 OMA:PIITHGI
            PhylomeDB:Q0WMZ7 Genevestigator:Q0WMZ7 Uniprot:Q0WMZ7
        Length = 422

 Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
 Identities = 192/293 (65%), Positives = 222/293 (75%)

Query:    55 SRSNEDIKNSDNSRFTGSVMEVTTFDRGFGQPAASDFPVWDKIGAIVRLSYGIGIYGAMA 114
             S S+ +   + +    G   EVT+     G  +  DF  WDKIGAIVRLSYGIGIY  MA
Sbjct:   107 SFSSGEFVGAGSGGLAGPSGEVTSVGEFVGG-SGGDFKDWDKIGAIVRLSYGIGIYCGMA 165

Query:   115 LAGRFICSITGVDSMGGFHPSLDAIVEGLGYAAPPIMALLFILDDEVVKLSPHARAIRDV 174
             +AGRFIC + G+D  GGF+ SLD I+ GLGYA+PPIMALLFILDDEVVKLSPHARAIRDV
Sbjct:   166 VAGRFICEVAGIDYTGGFNASLDTIIAGLGYASPPIMALLFILDDEVVKLSPHARAIRDV 225

Query:   175 EDEELRSFFYGMSPWQFVLIVAASSVGEELFYRAAVQGALADIFLRGTDFLTDAQGMASL 234
             ED+ELR FF GMS WQF+L+V ASSVGEELFYRAA QGALADIFLRGTD ++D++GM +L
Sbjct:   226 EDDELRGFFQGMSAWQFILVVTASSVGEELFYRAAFQGALADIFLRGTDLISDSRGMVAL 285

Query:   235 TGXXXXXXXXXXXXXXXXXXXLTGSLYYVATSPKDPTYVVAPVLRSRSGREDLKKLFAAW 294
             TG                   LTGSLYY+A SPKDPTY++APVL++RS R++LKKLFAAW
Sbjct:   286 TGLLPPFVPFAQVFAATITAALTGSLYYIAASPKDPTYIMAPVLKTRSARDELKKLFAAW 345

Query:   295 YERRQMKKIYSPXXXXXXXXXXGFEWIQTNNILAPIITHGIYSAVILGHGLWK 347
             YERRQMKKIYSP          GFEWIQTNN+LAPIITHGIYSAV+LG+GLWK
Sbjct:   346 YERRQMKKIYSPLLEGLLGLYLGFEWIQTNNLLAPIITHGIYSAVVLGNGLWK 398


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.138   0.417    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      372       308   0.00078  116 3  11 22  0.38    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  212 KB (2117 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.08u 0.16s 21.24t   Elapsed:  00:00:01
  Total cpu time:  21.08u 0.16s 21.24t   Elapsed:  00:00:01
  Start:  Sat May 11 08:25:54 2013   End:  Sat May 11 08:25:55 2013

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