Query 017371
Match_columns 372
No_of_seqs 242 out of 2054
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 13:20:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017371.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017371hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 2.5E-33 8.6E-38 259.6 30.4 270 76-372 16-312 (322)
2 3sre_A PON1, serum paraoxonase 100.0 2.7E-28 9.2E-33 226.6 29.0 273 69-371 41-355 (355)
3 3dr2_A Exported gluconolactona 100.0 6.1E-27 2.1E-31 215.0 31.1 255 69-371 36-304 (305)
4 3e5z_A Putative gluconolactona 99.9 9E-25 3.1E-29 199.2 30.1 253 69-371 19-284 (296)
5 3g4e_A Regucalcin; six bladed 99.9 1.7E-24 5.9E-29 197.9 29.4 244 72-363 6-263 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 3.7E-24 1.3E-28 196.0 28.0 260 70-372 10-298 (314)
7 4hw6_A Hypothetical protein, I 99.9 3.4E-23 1.2E-27 199.1 28.5 238 77-372 137-432 (433)
8 2p4o_A Hypothetical protein; p 99.9 7.6E-23 2.6E-27 187.9 28.6 230 71-363 26-279 (306)
9 1q7f_A NHL, brain tumor CG1071 99.9 2.6E-21 8.8E-26 175.1 30.0 234 75-371 26-278 (286)
10 3tc9_A Hypothetical hydrolase; 99.9 8.4E-22 2.9E-26 189.3 27.0 238 77-372 135-429 (430)
11 1rwi_B Serine/threonine-protei 99.9 1.3E-21 4.5E-26 175.2 25.9 230 80-372 25-263 (270)
12 3hrp_A Uncharacterized protein 99.9 7.7E-21 2.6E-25 181.6 32.7 237 77-372 129-409 (409)
13 2ghs_A AGR_C_1268P; regucalcin 99.9 6.4E-21 2.2E-25 176.6 30.3 242 69-364 39-294 (326)
14 2dg1_A DRP35, lactonase; beta 99.9 6.1E-21 2.1E-25 176.4 29.9 246 78-371 44-314 (333)
15 2qc5_A Streptogramin B lactona 99.9 3.9E-20 1.3E-24 167.5 31.8 230 78-371 19-258 (300)
16 2qc5_A Streptogramin B lactona 99.9 4.3E-20 1.5E-24 167.3 30.4 228 78-371 61-298 (300)
17 2z2n_A Virginiamycin B lyase; 99.9 1.1E-19 3.7E-24 164.5 32.9 230 78-371 14-253 (299)
18 2z2n_A Virginiamycin B lyase; 99.9 9.3E-20 3.2E-24 165.0 30.2 229 78-371 56-293 (299)
19 3fvz_A Peptidyl-glycine alpha- 99.9 2.3E-20 8E-25 172.9 24.3 241 76-371 21-320 (329)
20 2qe8_A Uncharacterized protein 99.9 5.1E-20 1.8E-24 171.7 24.7 243 70-365 9-313 (343)
21 3a9g_A Putative uncharacterize 99.8 6.2E-19 2.1E-23 165.0 26.3 258 69-371 20-350 (354)
22 3kya_A Putative phosphatase; s 99.8 1.4E-18 4.7E-23 167.5 27.8 239 76-372 136-474 (496)
23 3v64_C Agrin; beta propeller, 99.8 5E-18 1.7E-22 158.7 28.7 227 81-370 36-272 (349)
24 3v64_C Agrin; beta propeller, 99.8 4.2E-18 1.4E-22 159.2 25.3 201 78-337 72-284 (349)
25 3v65_B Low-density lipoprotein 99.8 1.2E-17 4.2E-22 158.1 28.1 228 80-370 78-315 (386)
26 2ism_A Putative oxidoreductase 99.8 5E-18 1.7E-22 158.8 24.0 250 69-364 22-336 (352)
27 1npe_A Nidogen, entactin; glyc 99.8 1.2E-17 4E-22 149.9 25.3 200 79-337 36-247 (267)
28 3dsm_A Uncharacterized protein 99.8 1.3E-17 4.6E-22 154.3 25.6 211 78-337 83-310 (328)
29 3v65_B Low-density lipoprotein 99.8 1.3E-17 4.4E-22 158.0 25.0 201 78-337 115-327 (386)
30 1ijq_A LDL receptor, low-densi 99.8 4.5E-17 1.5E-21 150.1 27.3 220 91-371 3-236 (316)
31 1ijq_A LDL receptor, low-densi 99.8 2.4E-17 8.1E-22 151.9 25.1 182 78-284 29-227 (316)
32 1rwi_B Serine/threonine-protei 99.8 2.1E-17 7.3E-22 147.6 23.9 184 76-284 64-253 (270)
33 1npe_A Nidogen, entactin; glyc 99.8 7.1E-17 2.4E-21 144.7 26.8 218 91-372 3-237 (267)
34 3sov_A LRP-6, low-density lipo 99.8 2E-17 6.8E-22 152.5 23.7 201 78-337 34-247 (318)
35 3p5b_L Low density lipoprotein 99.8 5.4E-17 1.8E-21 154.4 25.0 225 85-370 79-317 (400)
36 3fvz_A Peptidyl-glycine alpha- 99.8 1.6E-17 5.5E-22 153.7 19.5 192 72-284 84-311 (329)
37 3m0c_C LDL receptor, low-densi 99.8 2.2E-16 7.5E-21 161.4 28.0 228 82-370 388-629 (791)
38 3p5b_L Low density lipoprotein 99.8 1.9E-16 6.6E-21 150.5 24.4 182 78-284 111-309 (400)
39 3sov_A LRP-6, low-density lipo 99.8 4.1E-16 1.4E-20 143.6 25.7 220 89-371 4-236 (318)
40 4a0p_A LRP6, LRP-6, low-densit 99.7 2.8E-16 9.5E-21 157.4 25.6 185 74-284 32-226 (628)
41 1q7f_A NHL, brain tumor CG1071 99.7 6.7E-17 2.3E-21 145.9 18.8 183 77-284 75-270 (286)
42 3vgz_A Uncharacterized protein 99.7 2.9E-15 1E-19 138.5 29.5 236 79-372 41-302 (353)
43 4a2l_A BT_4663, two-component 99.7 3.8E-16 1.3E-20 161.3 25.2 226 81-371 359-612 (795)
44 3das_A Putative oxidoreductase 99.7 6.7E-15 2.3E-19 136.0 27.5 257 68-371 22-346 (347)
45 3dsm_A Uncharacterized protein 99.7 2.3E-15 7.9E-20 139.2 23.8 232 80-372 45-301 (328)
46 2p9w_A MAL S 1 allergenic prot 99.7 2.3E-15 8E-20 136.6 22.7 187 78-284 12-254 (334)
47 3s94_A LRP-6, low-density lipo 99.7 7.2E-16 2.5E-20 154.3 21.1 182 78-284 39-232 (619)
48 3hrp_A Uncharacterized protein 99.7 3.3E-15 1.1E-19 142.5 24.5 183 78-284 171-399 (409)
49 2fp8_A Strictosidine synthase; 99.7 7E-16 2.4E-20 142.1 19.2 177 79-284 80-302 (322)
50 3v9f_A Two-component system se 99.7 2.5E-15 8.5E-20 155.0 25.1 230 81-370 315-565 (781)
51 3v9f_A Two-component system se 99.7 6.9E-16 2.4E-20 159.1 20.9 225 81-371 365-609 (781)
52 3m0c_C LDL receptor, low-densi 99.7 5.2E-15 1.8E-19 151.3 26.0 182 78-284 423-621 (791)
53 3s94_A LRP-6, low-density lipo 99.7 5.9E-15 2E-19 147.7 25.4 182 78-284 348-540 (619)
54 3hfq_A Uncharacterized protein 99.7 2E-14 6.8E-19 133.2 27.3 239 78-371 39-315 (347)
55 2g8s_A Glucose/sorbosone dehyd 99.7 2.6E-15 9E-20 140.3 19.9 261 69-371 9-352 (353)
56 1n7d_A LDL receptor, low-densi 99.7 6.3E-16 2.2E-20 157.0 16.7 227 84-371 372-612 (699)
57 4a2l_A BT_4663, two-component 99.7 1.1E-14 3.7E-19 150.4 24.9 223 81-370 408-656 (795)
58 4a0p_A LRP6, LRP-6, low-densit 99.7 3.5E-14 1.2E-18 142.2 27.6 218 89-371 6-235 (628)
59 4hw6_A Hypothetical protein, I 99.7 6.5E-15 2.2E-19 141.4 21.0 182 77-284 180-422 (433)
60 3e5z_A Putative gluconolactona 99.7 3.1E-14 1.1E-18 129.1 24.4 176 78-284 68-277 (296)
61 1n7d_A LDL receptor, low-densi 99.7 5.1E-16 1.7E-20 157.7 13.7 182 78-284 405-603 (699)
62 3tc9_A Hypothetical hydrolase; 99.6 7E-15 2.4E-19 141.1 19.2 181 78-284 178-419 (430)
63 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 3E-14 1E-18 129.8 21.4 179 79-284 71-288 (314)
64 3hxj_A Pyrrolo-quinoline quino 99.6 3.2E-13 1.1E-17 123.8 27.7 208 84-363 103-315 (330)
65 3u4y_A Uncharacterized protein 99.6 8.2E-13 2.8E-17 121.1 28.0 233 78-372 40-303 (331)
66 3kya_A Putative phosphatase; s 99.6 1E-13 3.5E-18 133.6 21.8 184 77-284 184-464 (496)
67 3vgz_A Uncharacterized protein 99.6 4E-12 1.4E-16 117.2 30.9 217 79-362 89-334 (353)
68 2dg1_A DRP35, lactonase; beta 99.6 9.2E-14 3.2E-18 127.9 19.7 199 114-371 42-261 (333)
69 3no2_A Uncharacterized protein 99.6 1.8E-12 6.1E-17 116.8 25.9 215 89-364 5-234 (276)
70 2ism_A Putative oxidoreductase 99.6 4.9E-13 1.7E-17 124.8 22.8 217 108-371 22-295 (352)
71 3g4e_A Regucalcin; six bladed 99.6 1.6E-13 5.4E-18 124.9 18.8 178 79-284 54-262 (297)
72 3no2_A Uncharacterized protein 99.6 4.5E-12 1.5E-16 114.2 28.0 233 70-351 28-273 (276)
73 3dr2_A Exported gluconolactona 99.6 3E-13 1E-17 123.5 20.3 179 79-284 86-297 (305)
74 3ott_A Two-component system se 99.5 5E-13 1.7E-17 137.2 23.1 227 81-371 326-584 (758)
75 3ott_A Two-component system se 99.5 9.5E-13 3.3E-17 135.2 24.7 224 81-370 375-623 (758)
76 3a9g_A Putative uncharacterize 99.5 2.4E-12 8.2E-17 120.2 24.2 165 108-285 20-218 (354)
77 3u4y_A Uncharacterized protein 99.5 9E-12 3.1E-16 114.1 27.7 224 88-371 8-250 (331)
78 3hxj_A Pyrrolo-quinoline quino 99.5 2.7E-12 9.1E-17 117.6 22.3 216 82-370 63-281 (330)
79 1jof_A Carboxy-CIS,CIS-muconat 99.5 2.2E-11 7.4E-16 113.9 28.6 245 78-371 39-339 (365)
80 3hfq_A Uncharacterized protein 99.5 9.5E-12 3.3E-16 115.0 25.9 187 78-284 85-306 (347)
81 1l0q_A Surface layer protein; 99.5 3.9E-11 1.3E-15 112.5 30.4 230 79-372 32-274 (391)
82 2qe8_A Uncharacterized protein 99.5 1.7E-12 5.6E-17 120.7 18.9 185 76-284 64-310 (343)
83 1ri6_A Putative isomerase YBHE 99.5 2.6E-11 8.8E-16 111.1 26.8 234 79-371 38-306 (343)
84 2p4o_A Hypothetical protein; p 99.5 3.4E-12 1.2E-16 116.6 20.5 191 117-371 32-240 (306)
85 3das_A Putative oxidoreductase 99.5 3.3E-11 1.1E-15 111.3 25.3 222 109-371 24-290 (347)
86 2iwa_A Glutamine cyclotransfer 99.5 1.1E-11 3.9E-16 110.1 21.4 194 118-371 22-235 (266)
87 3scy_A Hypothetical bacterial 99.4 2E-10 6.9E-15 106.7 29.9 238 78-371 49-335 (361)
88 3qqz_A Putative uncharacterize 99.4 7.4E-11 2.5E-15 104.3 24.5 191 76-284 24-243 (255)
89 2ghs_A AGR_C_1268P; regucalcin 99.4 6.4E-12 2.2E-16 115.9 18.5 175 80-284 91-292 (326)
90 1ri6_A Putative isomerase YBHE 99.4 2.5E-10 8.6E-15 104.4 28.5 228 89-371 4-260 (343)
91 1cru_A Protein (soluble quinop 99.4 4E-12 1.4E-16 122.5 16.7 170 69-241 18-249 (454)
92 1pby_B Quinohemoprotein amine 99.4 1.2E-10 4.3E-15 106.2 24.9 220 80-371 35-308 (337)
93 1nir_A Nitrite reductase; hemo 99.4 3.9E-10 1.3E-14 111.3 29.8 231 85-372 144-401 (543)
94 1l0q_A Surface layer protein; 99.4 7E-10 2.4E-14 103.9 28.4 214 91-371 3-231 (391)
95 2g8s_A Glucose/sorbosone dehyd 99.3 8.5E-11 2.9E-15 109.6 19.9 165 108-285 9-218 (353)
96 2wg3_C Hedgehog-interacting pr 99.3 1.3E-10 4.6E-15 111.8 20.8 168 69-238 5-242 (463)
97 3bws_A Protein LP49; two-domai 99.3 1.3E-09 4.5E-14 103.5 27.2 248 80-372 171-431 (433)
98 1jof_A Carboxy-CIS,CIS-muconat 99.3 2.9E-09 9.8E-14 99.4 28.9 184 91-283 4-212 (365)
99 2iwa_A Glutamine cyclotransfer 99.3 2.8E-10 9.7E-15 101.1 20.6 152 78-250 65-237 (266)
100 3scy_A Hypothetical bacterial 99.3 7.9E-10 2.7E-14 102.7 24.4 185 79-284 100-326 (361)
101 3bws_A Protein LP49; two-domai 99.3 1.9E-09 6.6E-14 102.3 25.9 219 80-364 124-367 (433)
102 1nir_A Nitrite reductase; hemo 99.3 2.8E-09 9.5E-14 105.2 27.1 234 80-372 180-457 (543)
103 3nol_A Glutamine cyclotransfer 99.3 9.8E-10 3.3E-14 96.7 21.2 148 81-249 89-255 (262)
104 3nok_A Glutaminyl cyclase; bet 99.2 1.1E-09 3.8E-14 96.3 19.2 148 80-248 97-264 (268)
105 3nol_A Glutamine cyclotransfer 99.2 2.3E-09 7.7E-14 94.4 21.1 189 122-371 47-254 (262)
106 3mbr_X Glutamine cyclotransfer 99.2 3.4E-09 1.2E-13 92.4 21.3 149 80-249 66-234 (243)
107 1qks_A Cytochrome CD1 nitrite 99.2 1.3E-08 4.6E-13 100.6 27.9 228 86-372 163-420 (567)
108 1jmx_B Amine dehydrogenase; ox 99.2 1.3E-08 4.3E-13 93.3 25.7 216 79-339 43-336 (349)
109 3c75_H MADH, methylamine dehyd 99.2 7.1E-09 2.4E-13 98.6 24.4 231 91-372 86-401 (426)
110 3c75_H MADH, methylamine dehyd 99.2 6.1E-09 2.1E-13 99.0 23.6 222 70-335 112-409 (426)
111 3nok_A Glutaminyl cyclase; bet 99.2 3.7E-09 1.2E-13 93.1 19.9 188 122-371 59-264 (268)
112 1jmx_B Amine dehydrogenase; ox 99.1 1.4E-08 4.9E-13 92.9 24.3 158 83-251 4-176 (349)
113 3qqz_A Putative uncharacterize 99.1 2.1E-08 7.1E-13 88.5 23.2 195 117-370 27-250 (255)
114 3sjl_D Methylamine dehydrogena 99.1 6.6E-08 2.3E-12 90.4 27.5 237 70-371 72-361 (386)
115 3q6k_A 43.2 kDa salivary prote 99.1 2.3E-08 7.9E-13 93.0 24.2 228 80-363 27-344 (381)
116 1cru_A Protein (soluble quinop 99.1 1.4E-09 4.8E-14 104.7 16.7 171 108-286 18-249 (454)
117 2p9w_A MAL S 1 allergenic prot 99.1 3E-09 1E-13 96.6 17.6 159 161-372 13-214 (334)
118 1pby_B Quinohemoprotein amine 99.1 1.2E-08 4.2E-13 92.8 21.9 148 92-251 4-164 (337)
119 1qks_A Cytochrome CD1 nitrite 99.1 6.7E-08 2.3E-12 95.5 27.0 242 72-371 192-475 (567)
120 4ery_A WD repeat-containing pr 99.1 5.4E-07 1.8E-11 81.5 30.9 183 76-284 21-212 (312)
121 3mbr_X Glutamine cyclotransfer 99.1 5.7E-08 2E-12 84.7 22.5 154 160-371 20-177 (243)
122 2mad_H Methylamine dehydrogena 99.0 5.5E-07 1.9E-11 84.4 30.5 243 71-372 61-349 (373)
123 3ow8_A WD repeat-containing pr 99.0 1.5E-06 5.1E-11 79.4 32.2 234 75-371 77-319 (321)
124 2ece_A 462AA long hypothetical 99.0 6.4E-08 2.2E-12 91.5 22.9 187 91-284 97-341 (462)
125 1gxr_A ESG1, transducin-like e 99.0 8.4E-07 2.9E-11 80.4 29.9 224 80-371 99-335 (337)
126 1mda_H Methylamine dehydrogena 99.0 3.7E-08 1.3E-12 91.9 19.3 223 69-337 58-355 (368)
127 2ece_A 462AA long hypothetical 99.0 1.1E-07 3.6E-12 90.0 21.7 188 78-283 137-400 (462)
128 2ymu_A WD-40 repeat protein; u 98.9 1.2E-06 3.9E-11 86.2 30.0 224 79-369 345-576 (577)
129 2ojh_A Uncharacterized protein 98.9 5.1E-07 1.7E-11 79.9 24.5 164 97-282 20-191 (297)
130 1fwx_A Nitrous oxide reductase 98.9 1.1E-07 3.6E-12 93.0 21.3 190 89-284 100-350 (595)
131 2ymu_A WD-40 repeat protein; u 98.9 2E-06 6.9E-11 84.5 30.9 225 79-370 304-536 (577)
132 3sjl_D Methylamine dehydrogena 98.9 2.9E-07 9.9E-12 86.1 22.7 135 90-243 45-212 (386)
133 1k8k_C P40, ARP2/3 complex 41 98.9 1.7E-06 5.8E-11 79.7 27.9 232 80-371 10-272 (372)
134 2hqs_A Protein TOLB; TOLB, PAL 98.9 6.3E-07 2.1E-11 85.1 24.9 204 80-340 180-398 (415)
135 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.1E-06 3.7E-11 81.9 25.8 216 88-371 102-335 (376)
136 1gxr_A ESG1, transducin-like e 98.9 6.7E-06 2.3E-10 74.3 30.0 181 79-284 52-244 (337)
137 2hqs_A Protein TOLB; TOLB, PAL 98.9 2.7E-06 9.3E-11 80.7 28.3 160 99-283 159-329 (415)
138 2oiz_A Aromatic amine dehydrog 98.9 7.7E-07 2.6E-11 82.9 24.1 242 72-371 46-332 (361)
139 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.5E-06 5.1E-11 81.0 25.8 216 89-370 143-375 (376)
140 2pm9_A Protein WEB1, protein t 98.8 1.2E-06 4.1E-11 82.1 24.1 235 80-371 69-335 (416)
141 3zwl_B Eukaryotic translation 98.8 4.7E-06 1.6E-10 76.3 27.1 246 79-371 75-344 (369)
142 4gqb_B Methylosome protein 50; 98.8 3.7E-06 1.3E-10 77.7 26.4 227 81-371 85-329 (344)
143 4gqb_B Methylosome protein 50; 98.8 2.7E-06 9.4E-11 78.6 25.5 183 81-284 33-235 (344)
144 3zwl_B Eukaryotic translation 98.8 1.7E-05 5.7E-10 72.6 30.5 185 78-284 32-238 (369)
145 4g56_B MGC81050 protein; prote 98.8 5.7E-07 2E-11 83.5 20.6 182 80-281 44-244 (357)
146 2mad_H Methylamine dehydrogena 98.8 3.8E-06 1.3E-10 78.6 26.1 137 91-248 34-194 (373)
147 2oiz_A Aromatic amine dehydrog 98.8 1.3E-06 4.3E-11 81.4 22.7 101 165-277 258-360 (361)
148 2ojh_A Uncharacterized protein 98.8 1.2E-06 4.1E-11 77.5 21.6 178 79-282 42-234 (297)
149 1got_B GT-beta; complex (GTP-b 98.8 2.4E-05 8.2E-10 71.7 30.9 185 75-284 52-246 (340)
150 2z3z_A Dipeptidyl aminopeptida 98.8 2.7E-06 9.4E-11 86.0 26.5 199 79-281 82-328 (706)
151 1r5m_A SIR4-interacting protei 98.8 6.7E-06 2.3E-10 76.8 26.9 229 80-371 110-359 (425)
152 2vdu_B TRNA (guanine-N(7)-)-me 98.8 7.8E-06 2.7E-10 78.1 27.6 178 82-284 8-260 (450)
153 1erj_A Transcriptional repress 98.7 1.4E-05 4.9E-10 74.9 28.8 227 81-371 126-387 (393)
154 3vl1_A 26S proteasome regulato 98.7 5.4E-06 1.8E-10 77.9 25.9 224 85-371 104-363 (420)
155 2ecf_A Dipeptidyl peptidase IV 98.7 1.5E-06 5.3E-11 88.3 23.5 136 80-238 38-228 (741)
156 3ow8_A WD repeat-containing pr 98.7 5.8E-05 2E-09 68.7 31.6 182 76-284 30-226 (321)
157 1got_B GT-beta; complex (GTP-b 98.7 1.6E-05 5.5E-10 72.9 27.9 224 81-369 100-339 (340)
158 1mda_H Methylamine dehydrogena 98.7 4.8E-07 1.7E-11 84.4 17.2 86 90-179 32-143 (368)
159 3sre_A PON1, serum paraoxonase 98.7 6.6E-07 2.2E-11 82.8 17.7 184 161-372 50-251 (355)
160 1r5m_A SIR4-interacting protei 98.7 3.2E-06 1.1E-10 79.0 22.7 178 79-284 150-350 (425)
161 2ynn_A Coatomer subunit beta'; 98.7 3.6E-05 1.2E-09 69.3 28.8 151 76-250 11-172 (304)
162 1vyh_C Platelet-activating fac 98.7 2.5E-05 8.7E-10 73.7 28.2 149 78-250 108-265 (410)
163 4ery_A WD repeat-containing pr 98.7 9E-05 3.1E-09 66.6 30.7 230 79-372 66-311 (312)
164 2ecf_A Dipeptidyl peptidase IV 98.7 2.2E-06 7.7E-11 87.1 21.7 198 81-283 111-355 (741)
165 3mkq_A Coatomer beta'-subunit; 98.7 2.1E-05 7.3E-10 80.5 29.1 229 78-371 13-257 (814)
166 3s25_A Hypothetical 7-bladed b 98.6 4.8E-06 1.6E-10 75.5 21.2 210 81-372 57-292 (302)
167 4h5i_A Guanine nucleotide-exch 98.6 1.1E-05 3.7E-10 75.1 24.2 186 81-284 136-332 (365)
168 3iz6_a 40S ribosomal protein R 98.6 0.00015 5.1E-09 67.5 32.1 259 75-371 63-373 (380)
169 1erj_A Transcriptional repress 98.6 6.1E-05 2.1E-09 70.5 29.1 180 79-284 65-276 (393)
170 1sq9_A Antiviral protein SKI8; 98.6 1.7E-05 6E-10 73.6 25.2 237 79-371 63-393 (397)
171 3pe7_A Oligogalacturonate lyas 98.6 1.9E-05 6.6E-10 73.2 25.3 192 84-280 41-254 (388)
172 3s25_A Hypothetical 7-bladed b 98.6 1.2E-05 4.2E-10 72.8 23.1 212 84-372 21-254 (302)
173 1pgu_A Actin interacting prote 98.6 1.7E-05 5.9E-10 78.1 25.8 239 79-371 19-281 (615)
174 3frx_A Guanine nucleotide-bind 98.6 7.6E-05 2.6E-09 67.7 28.2 184 75-284 14-216 (319)
175 1vyh_C Platelet-activating fac 98.6 4.6E-05 1.6E-09 71.9 27.5 227 80-371 152-409 (410)
176 3ei3_B DNA damage-binding prot 98.6 2E-05 6.8E-10 73.1 24.4 186 78-284 73-271 (383)
177 4g56_B MGC81050 protein; prote 98.6 7.8E-06 2.7E-10 75.8 21.4 227 80-371 96-341 (357)
178 1sq9_A Antiviral protein SKI8; 98.6 4.7E-05 1.6E-09 70.7 26.9 239 75-371 13-320 (397)
179 1fwx_A Nitrous oxide reductase 98.6 9E-07 3.1E-11 86.5 14.7 184 70-278 188-457 (595)
180 1nr0_A Actin interacting prote 98.6 1.6E-05 5.5E-10 79.2 24.4 185 80-284 20-210 (611)
181 3vl1_A 26S proteasome regulato 98.6 1E-05 3.5E-10 75.9 21.7 149 80-251 58-213 (420)
182 1pgu_A Actin interacting prote 98.6 0.00013 4.3E-09 71.9 30.6 229 81-371 67-326 (615)
183 2z3z_A Dipeptidyl aminopeptida 98.5 3.7E-05 1.3E-09 77.6 26.6 181 81-282 183-418 (706)
184 3o4h_A Acylamino-acid-releasin 98.5 6.2E-06 2.1E-10 81.5 20.3 178 81-284 67-265 (582)
185 2xyi_A Probable histone-bindin 98.5 4.2E-05 1.4E-09 72.6 25.3 185 79-284 129-342 (430)
186 3i2n_A WD repeat-containing pr 98.5 2.8E-05 9.5E-10 70.9 22.2 184 80-283 67-279 (357)
187 3pe7_A Oligogalacturonate lyas 98.5 1.3E-05 4.3E-10 74.5 19.7 153 83-252 85-275 (388)
188 2aq5_A Coronin-1A; WD40 repeat 98.5 8.2E-05 2.8E-09 69.6 25.5 182 79-282 82-285 (402)
189 4aez_A CDC20, WD repeat-contai 98.5 0.00016 5.5E-09 67.6 27.5 175 80-283 136-322 (401)
190 1xfd_A DIP, dipeptidyl aminope 98.5 9.3E-06 3.2E-10 82.2 20.2 136 80-237 18-191 (723)
191 1yfq_A Cell cycle arrest prote 98.5 3.4E-05 1.2E-09 70.0 21.9 180 79-284 12-214 (342)
192 4e54_B DNA damage-binding prot 98.4 2.1E-05 7.3E-10 74.7 20.9 185 80-284 121-316 (435)
193 3fm0_A Protein CIAO1; WDR39,SG 98.4 9.8E-05 3.3E-09 67.8 24.7 182 81-284 19-214 (345)
194 4a9v_A PHOX; hydrolase, beta-p 98.4 1.6E-06 5.5E-11 83.9 12.6 75 158-238 473-550 (592)
195 4aez_A CDC20, WD repeat-contai 98.4 0.00053 1.8E-08 64.1 29.7 170 83-282 98-278 (401)
196 4a11_B DNA excision repair pro 98.4 0.00011 3.8E-09 68.1 24.7 266 75-371 40-363 (408)
197 3q6k_A 43.2 kDa salivary prote 98.4 6.7E-05 2.3E-09 69.7 22.5 190 77-284 85-343 (381)
198 3dm0_A Maltose-binding peripla 98.4 0.0004 1.4E-08 70.0 30.2 182 79-284 431-622 (694)
199 3mkq_A Coatomer beta'-subunit; 98.4 8.6E-05 2.9E-09 76.0 25.6 179 80-284 57-248 (814)
200 1k8k_C P40, ARP2/3 complex 41 98.4 9.1E-05 3.1E-09 67.9 23.4 182 79-283 53-263 (372)
201 3azo_A Aminopeptidase; POP fam 98.4 4.7E-05 1.6E-09 76.3 23.1 177 88-283 88-312 (662)
202 2ynn_A Coatomer subunit beta'; 98.4 0.00029 9.8E-09 63.3 26.1 229 81-371 58-300 (304)
203 3jrp_A Fusion protein of prote 98.4 0.00014 4.8E-09 66.6 24.6 185 79-284 12-229 (379)
204 3dwl_C Actin-related protein 2 98.4 6E-06 2E-10 76.4 15.2 184 80-284 13-225 (377)
205 2pbi_B Guanine nucleotide-bind 98.4 0.0005 1.7E-08 63.3 28.2 183 75-284 61-260 (354)
206 3frx_A Guanine nucleotide-bind 98.4 0.00068 2.3E-08 61.3 28.6 178 79-284 66-257 (319)
207 3odt_A Protein DOA1; ubiquitin 98.4 0.0003 1E-08 62.6 25.8 226 76-371 16-253 (313)
208 2pbi_B Guanine nucleotide-bind 98.4 0.00056 1.9E-08 63.0 28.3 225 80-369 108-353 (354)
209 2aq5_A Coronin-1A; WD40 repeat 98.4 6.9E-05 2.4E-09 70.1 21.7 182 79-280 132-329 (402)
210 2vdu_B TRNA (guanine-N(7)-)-me 98.3 0.00032 1.1E-08 66.7 26.5 151 80-251 104-272 (450)
211 3k26_A Polycomb protein EED; W 98.3 0.00017 5.9E-09 65.7 23.8 232 80-371 71-364 (366)
212 3sfz_A APAF-1, apoptotic pepti 98.3 0.00037 1.3E-08 74.9 29.9 183 78-284 615-818 (1249)
213 3ei3_B DNA damage-binding prot 98.3 0.00012 4.3E-09 67.7 23.1 240 80-372 120-381 (383)
214 3lrv_A PRE-mRNA-splicing facto 98.3 0.0013 4.3E-08 60.0 29.3 171 88-283 93-279 (343)
215 3v7d_B Cell division control p 98.3 0.00062 2.1E-08 64.7 28.2 174 82-284 126-330 (464)
216 3odt_A Protein DOA1; ubiquitin 98.3 0.00051 1.7E-08 61.1 25.8 221 79-371 60-294 (313)
217 3b7f_A Glycosyl hydrolase, BNR 98.3 2.1E-05 7.1E-10 74.0 17.2 175 86-284 19-253 (394)
218 3sfz_A APAF-1, apoptotic pepti 98.3 0.00035 1.2E-08 75.2 28.8 179 79-284 658-860 (1249)
219 1nr0_A Actin interacting prote 98.3 0.00058 2E-08 67.9 28.4 182 76-284 57-259 (611)
220 3f3f_A Nucleoporin SEH1; struc 98.3 0.00022 7.4E-09 64.1 23.2 180 75-276 8-226 (351)
221 1tl2_A L10, protein (tachylect 98.3 7.6E-06 2.6E-10 69.6 12.2 160 65-248 27-208 (236)
222 2ad6_A Methanol dehydrogenase 98.3 0.00069 2.3E-08 66.9 28.4 62 84-147 111-186 (571)
223 3k26_A Polycomb protein EED; W 98.3 0.00045 1.5E-08 62.8 25.0 155 72-250 12-192 (366)
224 2xzm_R RACK1; ribosome, transl 98.3 0.0015 5.1E-08 59.6 28.5 181 79-283 77-274 (343)
225 1xfd_A DIP, dipeptidyl aminope 98.3 7.2E-05 2.5E-09 75.6 21.2 199 80-281 62-323 (723)
226 3dm0_A Maltose-binding peripla 98.2 0.00042 1.5E-08 69.9 26.1 183 76-284 380-581 (694)
227 1yfq_A Cell cycle arrest prote 98.2 0.0001 3.5E-09 66.8 19.3 223 79-363 57-314 (342)
228 3dw8_B Serine/threonine-protei 98.2 0.0006 2E-08 64.2 25.3 185 80-284 30-305 (447)
229 2ad6_A Methanol dehydrogenase 98.2 0.00084 2.9E-08 66.3 27.0 43 319-363 484-527 (571)
230 3azo_A Aminopeptidase; POP fam 98.2 7.5E-05 2.6E-09 74.7 19.8 196 80-284 25-261 (662)
231 3o4h_A Acylamino-acid-releasin 98.2 3.4E-05 1.2E-09 76.1 16.9 170 81-284 112-301 (582)
232 3gre_A Serine/threonine-protei 98.2 0.001 3.4E-08 62.7 26.2 244 72-371 57-357 (437)
233 1k32_A Tricorn protease; prote 98.2 0.00017 6E-09 76.3 23.0 142 83-238 342-491 (1045)
234 3amr_A 3-phytase; beta-propell 98.2 0.00016 5.3E-09 66.2 19.2 132 200-371 102-261 (355)
235 3i2n_A WD repeat-containing pr 98.2 0.00028 9.4E-09 64.1 20.7 186 75-284 15-232 (357)
236 1kb0_A Quinohemoprotein alcoho 98.2 0.0015 5.1E-08 65.9 27.6 40 319-361 497-538 (677)
237 2pm9_A Protein WEB1, protein t 98.1 5.9E-05 2E-09 70.4 16.1 183 80-284 14-235 (416)
238 3jro_A Fusion protein of prote 98.1 0.00015 5.1E-09 74.1 20.1 185 79-284 10-227 (753)
239 4aow_A Guanine nucleotide-bind 98.1 0.0043 1.5E-07 55.7 28.8 181 79-284 87-276 (340)
240 4a5s_A Dipeptidyl peptidase 4 98.1 0.00062 2.1E-08 69.3 24.5 251 83-371 66-398 (740)
241 2xdw_A Prolyl endopeptidase; a 98.1 0.0012 4E-08 66.8 26.4 186 83-284 129-355 (710)
242 3v7d_B Cell division control p 98.1 0.0051 1.7E-07 58.3 29.4 182 79-284 163-370 (464)
243 4h5i_A Guanine nucleotide-exch 98.1 0.00025 8.4E-09 65.8 18.8 151 80-250 178-343 (365)
244 3dwl_C Actin-related protein 2 98.1 0.00015 5E-09 66.9 17.2 185 80-284 57-271 (377)
245 3c5m_A Oligogalacturonate lyas 98.1 0.00044 1.5E-08 63.9 20.4 195 81-283 38-257 (396)
246 2j04_A TAU60, YPL007P, hypothe 98.1 0.0031 1.1E-07 61.6 26.5 180 79-282 16-242 (588)
247 3dw8_B Serine/threonine-protei 98.0 0.0012 4E-08 62.1 23.0 157 75-251 174-374 (447)
248 3mmy_A MRNA export factor; mRN 98.0 0.0016 5.4E-08 59.1 23.1 97 75-177 36-146 (368)
249 2gop_A Trilobed protease; beta 98.0 0.0014 4.8E-08 59.5 22.6 174 80-283 60-280 (347)
250 3fm0_A Protein CIAO1; WDR39,SG 98.0 0.0006 2E-08 62.4 20.1 147 118-284 18-170 (345)
251 3amr_A 3-phytase; beta-propell 98.0 0.00069 2.4E-08 62.0 19.9 176 88-284 38-252 (355)
252 4aow_A Guanine nucleotide-bind 98.0 0.0071 2.4E-07 54.2 28.9 185 75-284 35-235 (340)
253 2xyi_A Probable histone-bindin 98.0 0.00061 2.1E-08 64.4 20.5 183 79-284 182-399 (430)
254 2xzm_R RACK1; ribosome, transl 98.0 0.0065 2.2E-07 55.3 26.7 181 76-284 19-233 (343)
255 2oaj_A Protein SNI1; WD40 repe 98.0 0.00085 2.9E-08 70.0 23.1 180 78-284 17-231 (902)
256 2wg3_C Hedgehog-interacting pr 98.0 0.00012 4.1E-09 70.2 15.3 165 108-280 5-237 (463)
257 2hes_X YDR267CP; beta-propelle 98.0 0.0036 1.2E-07 56.7 24.7 173 80-275 16-208 (330)
258 3iz6_a 40S ribosomal protein R 98.0 0.0026 8.8E-08 59.0 23.9 178 83-284 162-364 (380)
259 3jrp_A Fusion protein of prote 98.0 0.0014 4.7E-08 59.9 21.6 181 80-282 57-274 (379)
260 1kb0_A Quinohemoprotein alcoho 98.0 0.0045 1.5E-07 62.3 27.0 63 83-147 123-200 (677)
261 3b7f_A Glycosyl hydrolase, BNR 98.0 0.00046 1.6E-08 64.6 18.5 180 80-283 56-298 (394)
262 1k32_A Tricorn protease; prote 98.0 0.00093 3.2E-08 70.8 22.7 171 82-282 248-438 (1045)
263 3lrv_A PRE-mRNA-splicing facto 97.9 0.0033 1.1E-07 57.2 23.1 168 91-284 50-234 (343)
264 2hz6_A Endoplasmic reticulum t 97.9 4.4E-05 1.5E-09 71.1 10.0 136 89-251 9-150 (369)
265 2pm7_B Protein transport prote 97.9 0.013 4.4E-07 52.1 27.3 176 79-276 10-216 (297)
266 4gga_A P55CDC, cell division c 97.8 0.0064 2.2E-07 57.0 24.2 226 81-371 150-393 (420)
267 1z68_A Fibroblast activation p 97.8 0.00014 4.8E-09 73.6 13.3 129 81-237 18-187 (719)
268 1z68_A Fibroblast activation p 97.8 0.0004 1.4E-08 70.2 16.6 195 81-280 62-328 (719)
269 1w6s_A Methanol dehydrogenase 97.8 0.013 4.5E-07 58.0 26.7 45 317-363 491-536 (599)
270 1w6s_A Methanol dehydrogenase 97.8 0.032 1.1E-06 55.2 30.1 64 83-147 110-192 (599)
271 4a11_B DNA excision repair pro 97.8 0.0099 3.4E-07 54.6 24.0 149 79-251 100-277 (408)
272 4e54_B DNA damage-binding prot 97.8 0.0035 1.2E-07 59.2 21.0 240 80-371 166-428 (435)
273 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.028 9.6E-07 52.9 27.9 249 81-372 162-441 (445)
274 2xbg_A YCF48-like protein; pho 97.8 0.014 4.8E-07 53.0 24.2 180 80-284 37-224 (327)
275 3mmy_A MRNA export factor; mRN 97.7 0.0029 9.9E-08 57.3 19.2 201 79-284 87-335 (368)
276 1tl2_A L10, protein (tachylect 97.7 0.0023 7.8E-08 54.5 16.6 141 118-282 42-199 (236)
277 2j04_B YDR362CP, TAU91; beta p 97.7 0.0018 6.1E-08 63.2 18.5 149 80-250 268-428 (524)
278 3bg1_A Protein SEC13 homolog; 97.7 0.011 3.9E-07 53.0 22.1 183 80-283 15-235 (316)
279 3f3f_A Nucleoporin SEH1; struc 97.7 0.027 9.2E-07 50.1 24.6 111 122-251 16-144 (351)
280 1flg_A Protein (quinoprotein e 97.7 0.028 9.6E-07 55.4 26.4 42 319-363 506-549 (582)
281 2xbg_A YCF48-like protein; pho 97.7 0.018 6.1E-07 52.3 23.3 175 82-284 83-269 (327)
282 1yiq_A Quinohemoprotein alcoho 97.6 0.017 5.7E-07 58.3 24.9 42 319-363 495-538 (689)
283 3vu4_A KMHSV2; beta-propeller 97.6 0.037 1.3E-06 50.6 28.5 199 79-284 20-260 (355)
284 1kv9_A Type II quinohemoprotei 97.6 0.018 6.1E-07 57.9 24.8 43 319-363 478-521 (668)
285 2ovr_B FBW7, F-BOX/WD repeat p 97.6 0.048 1.6E-06 51.2 29.5 242 82-371 123-389 (445)
286 1kv9_A Type II quinohemoprotei 97.6 0.0076 2.6E-07 60.6 21.4 111 89-215 66-194 (668)
287 3iuj_A Prolyl endopeptidase; h 97.6 0.021 7E-07 57.6 24.6 178 82-280 132-341 (693)
288 1p22_A F-BOX/WD-repeat protein 97.6 0.03 1E-06 52.5 24.4 173 81-284 176-354 (435)
289 2gop_A Trilobed protease; beta 97.6 0.007 2.4E-07 54.8 19.2 136 98-247 42-206 (347)
290 3c5m_A Oligogalacturonate lyas 97.6 0.0084 2.9E-07 55.1 20.0 160 97-278 166-364 (396)
291 3gre_A Serine/threonine-protei 97.5 0.018 6.2E-07 53.9 22.3 149 80-250 113-292 (437)
292 2hes_X YDR267CP; beta-propelle 97.5 0.034 1.2E-06 50.2 23.3 143 122-284 19-173 (330)
293 4ggc_A P55CDC, cell division c 97.5 0.044 1.5E-06 48.4 25.7 230 81-371 70-313 (318)
294 1yr2_A Prolyl oligopeptidase; 97.5 0.028 9.7E-07 57.0 24.5 183 83-283 167-381 (741)
295 3jro_A Fusion protein of prote 97.5 0.0069 2.4E-07 61.7 19.9 183 79-283 54-273 (753)
296 2xdw_A Prolyl endopeptidase; a 97.5 0.023 8E-07 57.2 23.1 104 163-279 127-247 (710)
297 1yiq_A Quinohemoprotein alcoho 97.4 0.023 7.8E-07 57.3 22.7 112 89-215 70-199 (689)
298 2j04_A TAU60, YPL007P, hypothe 97.4 0.0031 1E-07 61.6 15.5 134 81-237 132-286 (588)
299 2bkl_A Prolyl endopeptidase; m 97.4 0.014 4.8E-07 58.8 21.1 183 82-283 124-337 (695)
300 3vu4_A KMHSV2; beta-propeller 97.4 0.075 2.6E-06 48.5 24.5 30 117-147 20-50 (355)
301 1p22_A F-BOX/WD-repeat protein 97.4 0.092 3.1E-06 49.2 24.9 214 83-371 138-363 (435)
302 2pm7_B Protein transport prote 97.4 0.067 2.3E-06 47.3 23.7 184 80-284 55-274 (297)
303 4gga_A P55CDC, cell division c 97.4 0.096 3.3E-06 48.8 29.7 168 82-277 109-289 (420)
304 1flg_A Protein (quinoprotein e 97.4 0.063 2.1E-06 52.9 24.2 111 89-214 68-199 (582)
305 4a5s_A Dipeptidyl peptidase 4 97.2 0.01 3.4E-07 60.3 17.5 131 82-237 20-189 (740)
306 3zwu_A Alkaline phosphatase PH 97.2 0.0027 9.2E-08 62.4 12.5 73 159-236 474-548 (592)
307 3bg1_A Protein SEC13 homolog; 97.2 0.075 2.6E-06 47.5 21.5 199 80-284 59-282 (316)
308 2oaj_A Protein SNI1; WD40 repe 97.1 0.025 8.6E-07 58.9 19.5 149 80-250 60-242 (902)
309 2bkl_A Prolyl endopeptidase; m 97.1 0.056 1.9E-06 54.3 21.2 107 162-282 122-245 (695)
310 2j04_B YDR362CP, TAU91; beta p 97.1 0.013 4.5E-07 57.0 15.5 177 80-283 209-416 (524)
311 3iuj_A Prolyl endopeptidase; h 97.0 0.14 5E-06 51.3 22.8 103 162-279 130-248 (693)
312 2oit_A Nucleoporin 214KDA; NH2 96.9 0.082 2.8E-06 49.9 19.6 149 80-250 94-278 (434)
313 1yr2_A Prolyl oligopeptidase; 96.8 0.21 7.3E-06 50.5 22.6 103 162-278 164-281 (741)
314 2oit_A Nucleoporin 214KDA; NH2 96.7 0.018 6E-07 54.6 13.2 146 162-358 94-255 (434)
315 4a9v_A PHOX; hydrolase, beta-p 96.7 0.019 6.4E-07 55.8 12.6 116 220-360 385-549 (592)
316 3zwu_A Alkaline phosphatase PH 96.6 0.019 6.4E-07 56.4 12.3 116 219-359 384-548 (592)
317 1k3i_A Galactose oxidase precu 96.4 0.33 1.1E-05 48.4 20.5 189 84-284 248-475 (656)
318 2w18_A PALB2, fancn, partner a 96.2 0.44 1.5E-05 43.5 18.0 51 197-248 303-355 (356)
319 4ggc_A P55CDC, cell division c 96.1 0.62 2.1E-05 40.7 29.4 142 82-250 29-181 (318)
320 2cn3_A Xyloglucanase, beta-1,4 95.9 1.7 5.8E-05 43.9 23.6 99 80-178 24-151 (737)
321 2xe4_A Oligopeptidase B; hydro 95.4 0.54 1.8E-05 47.7 17.2 105 163-282 176-289 (751)
322 1k3i_A Galactose oxidase precu 95.4 1.2 3.9E-05 44.4 19.3 120 80-214 187-329 (656)
323 2hz6_A Endoplasmic reticulum t 95.1 0.023 7.8E-07 52.6 5.3 52 197-250 17-68 (369)
324 1sqj_A OXG-RCBH, oligoxylogluc 95.1 3.5 0.00012 42.0 22.7 152 80-251 16-201 (789)
325 4gq1_A NUP37; propeller, trans 94.6 2.7 9.2E-05 38.5 22.5 184 80-284 138-379 (393)
326 2w18_A PALB2, fancn, partner a 94.6 2.6 9E-05 38.3 23.1 152 122-284 183-346 (356)
327 2zwa_A Leucine carboxyl methyl 94.6 2.7 9.2E-05 42.1 19.4 147 88-252 396-579 (695)
328 2be1_A Serine/threonine-protei 94.4 0.2 6.9E-06 45.6 9.6 109 89-216 10-138 (339)
329 2xe4_A Oligopeptidase B; hydro 94.0 2.2 7.4E-05 43.2 17.5 113 122-251 178-305 (751)
330 3a0f_A Xyloglucanase; beta-pro 93.5 7.2 0.00024 39.5 23.2 181 80-283 22-264 (763)
331 4gq1_A NUP37; propeller, trans 92.6 6.1 0.00021 36.0 25.3 135 92-250 104-286 (393)
332 2uvk_A YJHT; unknown function, 92.4 5.9 0.0002 35.5 20.8 153 89-248 19-224 (357)
333 2be1_A Serine/threonine-protei 91.4 2.8 9.5E-05 38.0 12.6 24 88-111 110-135 (339)
334 2woz_A Kelch repeat and BTB do 87.4 14 0.00049 32.3 19.8 132 101-251 80-232 (318)
335 4asc_A Kelch repeat and BTB do 85.4 18 0.00062 31.6 21.1 132 101-251 69-222 (315)
336 3sbq_A Nitrous-oxide reductase 85.0 3.5 0.00012 39.9 8.9 84 200-283 299-396 (638)
337 3s9j_A Member of DUF4221 famil 84.4 20 0.00067 32.8 13.5 101 227-361 36-150 (369)
338 1xip_A Nucleoporin NUP159; bet 83.9 26 0.00089 32.2 18.2 167 80-282 39-231 (388)
339 2vpj_A Kelch-like protein 12; 83.1 22 0.00075 30.7 19.9 142 89-250 112-278 (301)
340 3a0f_A Xyloglucanase; beta-pro 82.5 21 0.00071 36.1 14.2 151 82-249 591-761 (763)
341 4asc_A Kelch repeat and BTB do 81.7 26 0.00088 30.5 23.9 136 99-251 13-175 (315)
342 1zgk_A Kelch-like ECH-associat 80.9 27 0.00093 30.3 23.0 133 99-251 39-194 (308)
343 1xip_A Nucleoporin NUP159; bet 80.5 35 0.0012 31.3 20.0 127 80-237 89-232 (388)
344 1sqj_A OXG-RCBH, oligoxylogluc 80.4 53 0.0018 33.2 18.6 150 117-284 15-190 (789)
345 2woz_A Kelch repeat and BTB do 79.4 31 0.0011 30.0 24.7 134 100-251 25-185 (318)
346 3ii7_A Kelch-like protein 7; p 76.9 36 0.0012 29.4 26.1 135 98-251 23-179 (306)
347 1zgk_A Kelch-like ECH-associat 71.5 50 0.0017 28.5 19.6 143 89-251 70-241 (308)
348 2cn3_A Xyloglucanase, beta-1,4 68.8 44 0.0015 33.5 12.1 118 118-245 24-159 (737)
349 2zwa_A Leucine carboxyl methyl 67.6 1E+02 0.0034 30.6 20.4 146 122-283 391-558 (695)
350 2xn4_A Kelch-like protein 2; s 67.5 59 0.002 27.8 22.9 132 100-251 31-183 (302)
351 3sbq_A Nitrous-oxide reductase 65.6 43 0.0015 32.5 10.4 71 71-144 317-405 (638)
352 2vpj_A Kelch-like protein 12; 62.4 73 0.0025 27.2 25.6 143 89-251 62-232 (301)
353 3ii7_A Kelch-like protein 7; p 62.2 75 0.0026 27.2 25.2 147 89-251 55-226 (306)
354 2uvk_A YJHT; unknown function, 59.2 93 0.0032 27.3 17.0 97 165-284 13-127 (357)
355 3f6k_A Sortilin; protein sorti 52.5 87 0.003 31.1 10.6 110 123-245 50-164 (685)
356 2xn4_A Kelch-like protein 2; s 47.5 1.3E+02 0.0045 25.5 25.2 145 89-251 61-230 (302)
357 3elq_A Arylsulfate sulfotransf 38.5 2.8E+02 0.0096 26.8 26.6 45 88-134 216-265 (571)
358 3elq_A Arylsulfate sulfotransf 32.5 3.5E+02 0.012 26.1 18.2 56 122-178 211-266 (571)
359 4hvt_A Ritya.17583.B, post-pro 29.1 4.3E+02 0.015 26.1 16.9 34 199-236 156-201 (711)
360 3al9_A Plexin-A2; beta-propell 20.8 2.4E+02 0.0082 27.0 7.5 62 82-144 403-477 (539)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=2.5e-33 Score=259.62 Aligned_cols=270 Identities=24% Similarity=0.386 Sum_probs=217.9
Q ss_pred CCCCCCccEEEcCCCc-EEEEecCCeEEEEe-C-CceEEEEec--------------------CCCcccCeEEcC-CCCE
Q 017371 76 GSVNHPEDASMDKNGV-IYTATRDGWIKRLQ-D-GTWVNWKFI--------------------DSQTLVGLTSTK-EGHL 131 (372)
Q Consensus 76 g~~~~p~~i~~d~~G~-l~v~~~~g~i~~~~-~-g~~~~~~~~--------------------~~~p~~gl~~d~-dG~l 131 (372)
|.+..||++++|++|+ +|++..+++|++++ + ++++.+... .+.|. ||++++ +|+|
T Consensus 16 g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~-gi~~~~~~g~l 94 (322)
T 2fp8_A 16 APSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTY-DISYNLQNNQL 94 (322)
T ss_dssp CSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEE-EEEEETTTTEE
T ss_pred CccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCc-eEEEcCCCCcE
Confidence 5578999999999998 88888899999999 4 467666531 24688 999997 8999
Q ss_pred EEEeCCCcEEEEcCC-C-cEEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC
Q 017371 132 IICDNANGLHKVSED-G-VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 208 (372)
Q Consensus 132 ~v~~~~~gv~~~~~~-g-~~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t 208 (372)
||++...++++++.+ + .+.+.....+.++..++++++|+ +|+|||+|....|....+...+.+....++|+++|+++
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 999988889999954 5 67776555555667899999999 99999999865555444433444455678999999988
Q ss_pred CeEEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchh
Q 017371 209 NITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDAR 288 (372)
Q Consensus 209 ~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~ 288 (372)
++++.+...+..|+|+++++||+.+||+++.+++|++|++++...+..+.+.+ .++ |+++++|++|+|||++...++.
T Consensus 175 ~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 175 KETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp TEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred CEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCcccc
Confidence 98888878889999999999999999999998999999998766566666654 567 9999999999999999763221
Q ss_pred HHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEE
Q 017371 289 RMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGK 368 (372)
Q Consensus 289 ~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~ 368 (372)
. |. ....+.|++++++|+.+..+..++|..+..++++.+.+++||+++..+++|.+
T Consensus 253 ~-----------------~~-------~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~ 308 (322)
T 2fp8_A 253 N-----------------MH-------GRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGI 308 (322)
T ss_dssp S-----------------TT-------SCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEE
T ss_pred c-----------------cc-------CCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEE
Confidence 1 00 11256899999999999999998876677788888889999999999999999
Q ss_pred EeCC
Q 017371 369 VQLS 372 (372)
Q Consensus 369 ~~~~ 372 (372)
++++
T Consensus 309 ~~~~ 312 (322)
T 2fp8_A 309 LVYD 312 (322)
T ss_dssp EEC-
T ss_pred Eecc
Confidence 9874
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.97 E-value=2.7e-28 Score=226.61 Aligned_cols=273 Identities=20% Similarity=0.312 Sum_probs=202.6
Q ss_pred CceEecCCCCCCCccEEEcCCCcEEEEe-------------cCCeEEEEe-C---CceEEEEecC-------CCcccCeE
Q 017371 69 DFIKVGEGSVNHPEDASMDKNGVIYTAT-------------RDGWIKRLQ-D---GTWVNWKFID-------SQTLVGLT 124 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~-------------~~g~i~~~~-~---g~~~~~~~~~-------~~p~~gl~ 124 (372)
..+.+. +...+||+|+++++|.+|+++ .+|+|++++ + ++.+.+.... .+|+ ||.
T Consensus 41 ~C~~i~-~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~Ph-Gi~ 118 (355)
T 3sre_A 41 NCNLVK-GIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPH-GIS 118 (355)
T ss_dssp CEEECT-TCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEE-EEE
T ss_pred CCEEeC-CCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeee-eeE
Confidence 667774 434699999999999999997 689999999 4 3455544332 4899 999
Q ss_pred EcC--CC--CEEEEeCCCc-----EEEEcCCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCccc--cccc
Q 017371 125 STK--EG--HLIICDNANG-----LHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEY--CLDI 192 (372)
Q Consensus 125 ~d~--dG--~l~v~~~~~g-----v~~~~~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~--~~~~ 192 (372)
+.+ +| +|||+++..+ +++++.++ ...+.....+.++..+|+++++++|++|++++. |-.+.. ..+.
T Consensus 119 ~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~--~ftd~~~~~~e~ 196 (355)
T 3sre_A 119 TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDH--YFIDPYLKSWEM 196 (355)
T ss_dssp EEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESC--SCSSHHHHHHHH
T ss_pred EEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCc--EeCCcccccchh
Confidence 854 45 5999987643 88888655 666666677888899999999999999999863 111110 0111
Q ss_pred ccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCC-CCcceeeeccCCCCCCceeE
Q 017371 193 LEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE-RKGKLETFAENLPGAPDNIN 271 (372)
Q Consensus 193 ~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~g~p~~i~ 271 (372)
....+.|+||+||+ ++++.+.+++.+|||++++||++++|++++..++|++|+++.. +++..+.+ ..++.|||++
T Consensus 197 ~~~~~~g~vyr~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~ 272 (355)
T 3sre_A 197 HLGLAWSFVTYYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNIS 272 (355)
T ss_dssp HTTCCCEEEEEECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEE
T ss_pred hccCCccEEEEEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEE
Confidence 23456789999998 4677888999999999999999999999999999999998742 34445555 3578899999
Q ss_pred EcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEEC----CCCcEEEEEECCCCCeeccc
Q 017371 272 LAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA----EDGTIIRNLVDPTGQLMSFV 346 (372)
Q Consensus 272 ~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~----~~g~~~~~~~~~~g~~~~~~ 346 (372)
+|+ +|++|++...... ++...-|.. .....|.++. .++++.+.|.+ +|+.++..
T Consensus 273 vD~e~G~lwva~~~~g~-------------~v~~~~P~~-------~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~ 331 (355)
T 3sre_A 273 VDPVTGDLWVGCHPNGM-------------RIFFYDAEN-------PPGSEVLRIQDILSEEPKVTVVYAE-NGTVLQGS 331 (355)
T ss_dssp ECTTTCCEEEEEESCHH-------------HHHSCCTTS-------CCCEEEEEEECTTSSSCEEEEEEEE-CSSSCCSE
T ss_pred EeCCCCcEEEEecCCce-------------EEEEECCCC-------CCCCEEEEEEccCCCCcEEEEEEEc-CCCEEEee
Confidence 999 5999998753211 111111221 1134566665 47888888988 79889999
Q ss_pred eeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 347 TSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 347 t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
|.+.+.+|+||||+...+ +..|+|
T Consensus 332 T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 332 TVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp EEEEEETTEEEEEESSSC-EEEEEC
T ss_pred EEEEEECCEEEEEEcCCC-ceeccC
Confidence 999999999999999888 556654
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.96 E-value=6.1e-27 Score=214.97 Aligned_cols=255 Identities=16% Similarity=0.227 Sum_probs=199.2
Q ss_pred CceEecCCCCCCCccEEEcCCCc-EEEEe-cCCeEEEEe-CCceEEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc
Q 017371 69 DFIKVGEGSVNHPEDASMDKNGV-IYTAT-RDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS 144 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~G~-l~v~~-~~g~i~~~~-~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~ 144 (372)
.++.+..+ +..+|+.+++++|+ ||+.+ .+++|++++ +|+.+.+....+.+. +++++++|+||+++.. .+|.+++
T Consensus 36 ~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~-gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTN-GNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEE-EEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccc-eeeECCCCCEEEEECCCCEEEEEC
Confidence 56677777 57899999999887 66666 789999999 888888877778889 9999999999999876 6799999
Q ss_pred CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccc--cccccccCCCeEEEEeCCCCeEEEEeCCccCc
Q 017371 145 EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYC--LDILEGKPHGQLLKYDPSSNITTLVADGFYFA 221 (372)
Q Consensus 145 ~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~--~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~ 221 (372)
.+| .+.+.....+.++..+++++++++|+||+||.. |+..... .........++|+++|+++++++.+. .+..|
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p 190 (305)
T 3dr2_A 114 ADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP 190 (305)
T ss_dssp TTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE
T ss_pred CCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC
Confidence 668 777766556666678999999999999999863 2111000 00011123578999999888888777 88899
Q ss_pred ceEEEecCCCEEEEEeCCC-----CeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcc
Q 017371 222 NGVALSRDEDYVVVCESWK-----FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSS 296 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~ 296 (372)
+|+++++|++.||++++.. ++|++|++++..+...+.+.+...+.|+++++|++|+||+++..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~------------ 258 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT------------ 258 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS------------
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC------------
Confidence 9999999999999999863 78999998764444445555445678999999999999999844
Q ss_pred hhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE--CCEEEEEeCCCCeEEEEeC
Q 017371 297 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 297 ~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~ 371 (372)
+|.+|+++|+.+..+..+.+ ++.+++. +++||+++. +.|.++++
T Consensus 259 ------------------------gv~~~~~~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 259 ------------------------GVCVFDSDGQLLGHIPTPGT-----ASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp ------------------------EEEEECTTSCEEEEEECSSC-----CCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred ------------------------cEEEECCCCCEEEEEECCCc-----eeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 69999999999999887653 4555553 478999995 57888775
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.94 E-value=9e-25 Score=199.18 Aligned_cols=253 Identities=19% Similarity=0.251 Sum_probs=191.5
Q ss_pred CceEecCCCCCCCccEEEcCCCc-EEEEe-cCCeEEEEe-CCceEEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc
Q 017371 69 DFIKVGEGSVNHPEDASMDKNGV-IYTAT-RDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS 144 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~G~-l~v~~-~~g~i~~~~-~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~ 144 (372)
.++.+..+ +..||+++++++|+ ||+.+ .+++|++++ ++..+.+....+.|. +++++++|+||+++.. .+|.+++
T Consensus 19 ~~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 19 EARRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQN-GHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEE-EEEECTTCCEEEEETTTTEEEEEC
T ss_pred cEEEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcc-eeeECCCCcEEEEecCCCeEEEEc
Confidence 44566655 67899999999997 66555 788999999 444777776677788 9999999999999875 6799999
Q ss_pred -CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccc--cccccccCCCeEEEEeCCCCeEEEEeCCccC
Q 017371 145 -EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYC--LDILEGKPHGQLLKYDPSSNITTLVADGFYF 220 (372)
Q Consensus 145 -~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~--~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~ 220 (372)
.+| .+.+.....+.....+++++++++|++|++|+. |+..... .........++|++++++ ++.+.+...+..
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~--~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~ 173 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPT--YGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK 173 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECS--HHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCc--cccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC
Confidence 578 666655444555567899999999999999862 1100000 000011235689999998 888888888889
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEEcc-CCCC-cceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchh
Q 017371 221 ANGVALSRDEDYVVVCESWKFRCRKYWLK-GERK-GKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKL 298 (372)
Q Consensus 221 ~~gi~~~~dg~~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~ 298 (372)
|+++++++|++.+ ++++..++|++|+++ ..+. .....+ ....+.|+++++|++|++|+++ .
T Consensus 174 ~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~-------------- 236 (296)
T 3e5z_A 174 PNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-G-------------- 236 (296)
T ss_dssp EEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-T--------------
T ss_pred CccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-C--------------
Confidence 9999999999977 999988999999986 2233 333455 4455689999999999999999 4
Q ss_pred HHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE--C-CEEEEEeCCCCeEEEEeC
Q 017371 299 IKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--D-NHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 299 ~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~-g~L~igs~~~~~i~~~~~ 371 (372)
+.|.+++++|+.+..+..+.+ ++++.+. + ++||+++. +.|.++++
T Consensus 237 ---------------------~~v~~~~~~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t~--~~l~~~~~ 284 (296)
T 3e5z_A 237 ---------------------DGVHVLTPDGDELGRVLTPQT-----TSNLCFGGPEGRTLYMTVS--TEFWSIET 284 (296)
T ss_dssp ---------------------TEEEEECTTSCEEEEEECSSC-----CCEEEEESTTSCEEEEEET--TEEEEEEC
T ss_pred ---------------------CeEEEECCCCCEEEEEECCCC-----ceeEEEECCCCCEEEEEcC--CeEEEEEc
Confidence 379999999999988887654 4555553 3 58999995 57888875
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.94 E-value=1.7e-24 Score=197.88 Aligned_cols=244 Identities=13% Similarity=0.152 Sum_probs=184.2
Q ss_pred EecCCCCCCCccEEEcC-CCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CC
Q 017371 72 KVGEGSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-ED 146 (372)
Q Consensus 72 ~~~~g~~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~ 146 (372)
.+......-+|+.+.++ ++.||+.+ .+++|++++ +++.+.+. ..+.+. +++++++|+||++. ..+|++++ .+
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~-~i~~~~dG~l~v~~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVS-SVALRQSGGYVATI-GTKFCALNWKE 82 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEE-EEEEBTTSSEEEEE-TTEEEEEETTT
T ss_pred EEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe-CCCceE-EEEECCCCCEEEEE-CCeEEEEECCC
Confidence 33333366799999997 67899988 688999999 45555543 346778 99999999999997 57899999 56
Q ss_pred C-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEE
Q 017371 147 G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVA 225 (372)
Q Consensus 147 g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~ 225 (372)
+ .+.+.....+.+...++++++|++|++|+++...... ........++||+++++ ++...+...+..|||++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------PAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLD 155 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------TTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEE
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc------cccccCCCcEEEEEECC-CCEEEEeeccccccceE
Confidence 7 6666554344445678999999999999987531100 00011346789999987 67777777888999999
Q ss_pred EecCCCEEEEEeCCCCeEEEEEcc--CCCCcceeeeccC--CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHH
Q 017371 226 LSRDEDYVVVCESWKFRCRKYWLK--GERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKH 301 (372)
Q Consensus 226 ~~~dg~~l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~ 301 (372)
+++|++.+|++++..++|++|+++ +......+.+... ..+.|+++++|++|+||+++..
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~----------------- 218 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN----------------- 218 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET-----------------
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC-----------------
Confidence 999999999999999999999874 3233333444332 2367999999999999999987
Q ss_pred HHHhcCccccccccCCCceEEEEECCC-CcEEEEEECCCCCeeccceeeEEEC---CEEEEEeCCC
Q 017371 302 VLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQVD---NHLYVISLTS 363 (372)
Q Consensus 302 ~~~~~p~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~~---g~L~igs~~~ 363 (372)
.+.|.+++++ |+.+..+..+.. .++++++.+ ++||+++...
T Consensus 219 -----------------~~~v~~~d~~tG~~~~~i~~p~~----~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 219 -----------------GGRVIRLDPVTGKRLQTVKLPVD----KTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp -----------------TTEEEEECTTTCCEEEEEECSSS----BEEEEEEESGGGCEEEEEEBCT
T ss_pred -----------------CCEEEEEcCCCceEEEEEECCCC----CceEEEEeCCCCCEEEEEcCCc
Confidence 4689999997 999998887643 467788752 6899999754
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.94 E-value=3.7e-24 Score=196.00 Aligned_cols=260 Identities=21% Similarity=0.297 Sum_probs=191.0
Q ss_pred ceEecCCCCCCCccEEEcCCCcEEEE--------ecCCeEEEEe--CCceEEEEe-----cCCCcccCeEEcCC-CCEEE
Q 017371 70 FIKVGEGSVNHPEDASMDKNGVIYTA--------TRDGWIKRLQ--DGTWVNWKF-----IDSQTLVGLTSTKE-GHLII 133 (372)
Q Consensus 70 ~~~~~~g~~~~p~~i~~d~~G~l~v~--------~~~g~i~~~~--~g~~~~~~~-----~~~~p~~gl~~d~d-G~l~v 133 (372)
.+.+..+ +..|++++++++|.+|++ ..+++|++++ +++++.+.. ..+.|. +++++++ |+|||
T Consensus 10 ~~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~~~~~g~l~v 87 (314)
T 1pjx_A 10 FTKVTED-IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPA-GCQCDRDANQLFV 87 (314)
T ss_dssp CEEEECC-CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEE-EEEECSSSSEEEE
T ss_pred Hhhhhcc-CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCc-eEEEecCCCcEEE
Confidence 4455555 789999999999999999 4788999999 677766644 335788 9999999 99999
Q ss_pred EeCCCcEEEEcCCC-cEEE-eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeE
Q 017371 134 CDNANGLHKVSEDG-VENF-LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT 211 (372)
Q Consensus 134 ~~~~~gv~~~~~~g-~~~l-~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~ 211 (372)
++...+|++++.+| ...+ .....+.....++++++|++|++|+++........++ ........++|+++|++ ++.
T Consensus 88 ~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 88 ADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY--TRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp EETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC--CBTTSSSCEEEEEECTT-SCE
T ss_pred EECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccc--cccccCCCCeEEEECCC-CCE
Confidence 98777899999448 5544 3322233345789999999999999976311000000 00112234789999987 777
Q ss_pred EEEeCCccCcceEEEe----cCCCEEEEEeCCCCeEEEEEccC-CCCcceeeeccC--CC-CCCceeEEcCCCCEEEEEe
Q 017371 212 TLVADGFYFANGVALS----RDEDYVVVCESWKFRCRKYWLKG-ERKGKLETFAEN--LP-GAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 212 ~~~~~~~~~~~gi~~~----~dg~~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~--~~-g~p~~i~~d~~G~lwva~~ 283 (372)
+.+......|++++++ +|++.+|++++.+++|++|++++ .+......+... .. +.|+++++|++|++|+++.
T Consensus 165 ~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 165 IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 7766667789999999 99988999998889999999762 222222233221 11 5689999999999999997
Q ss_pred cCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC-CcEEEEEECCCCCeeccceeeEEE-CCE-EEEEe
Q 017371 284 KLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVIS 360 (372)
Q Consensus 284 ~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~-~g~-L~igs 360 (372)
. .+.|.+++++ |+.+..+..+. ..++++.++ +++ ||+++
T Consensus 245 ~----------------------------------~~~i~~~d~~~g~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 245 G----------------------------------SSHIEVFGPDGGQPKMRIRCPF----EKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp T----------------------------------TTEEEEECTTCBSCSEEEECSS----SCEEEEEECTTSSEEEEEE
T ss_pred C----------------------------------CCEEEEEcCCCCcEeEEEeCCC----CCceeEEECCCCCEEEEEe
Confidence 6 4689999988 88777776543 346777775 454 99999
Q ss_pred CCCCeEEEEeCC
Q 017371 361 LTSNFIGKVQLS 372 (372)
Q Consensus 361 ~~~~~i~~~~~~ 372 (372)
...+.|.+++++
T Consensus 287 ~~~~~l~~~~~~ 298 (314)
T 1pjx_A 287 HENNAVWKFEWQ 298 (314)
T ss_dssp TTTTEEEEEECS
T ss_pred CCCCeEEEEeCC
Confidence 988999999863
No 7
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.92 E-value=3.4e-23 Score=199.11 Aligned_cols=238 Identities=12% Similarity=0.096 Sum_probs=182.9
Q ss_pred CCCCCccEEEcCC---CcEEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCC-----CcEEEEcCC
Q 017371 77 SVNHPEDASMDKN---GVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-----NGLHKVSED 146 (372)
Q Consensus 77 ~~~~p~~i~~d~~---G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~-----~gv~~~~~~ 146 (372)
.|..|.+|++|++ |+||+++..++|++++ ++++..+......|. +++++++|+|||++.. .+++.++.+
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~-giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCA-DVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEE-EEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCcc-EEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 6788999999974 8999999658999999 678888777777899 9999999999999863 357777743
Q ss_pred C-c---EEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeE-EEEeC--Cc
Q 017371 147 G-V---ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVAD--GF 218 (372)
Q Consensus 147 g-~---~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~-~~~~~--~~ 218 (372)
+ . ..+. .+..|+++++|+ +|+|||+|. ..++|+++|++++++ +.+.. ..
T Consensus 216 ~~~~~~~~~~------~~~~P~giavd~~~G~lyv~d~-----------------~~~~V~~~d~~~g~~~~~~~~~~~~ 272 (433)
T 4hw6_A 216 SGFTERLSLC------NARGAKTCAVHPQNGKIYYTRY-----------------HHAMISSYDPATGTLTEEEVMMDTK 272 (433)
T ss_dssp GTTCCEEEEE------ECSSBCCCEECTTTCCEEECBT-----------------TCSEEEEECTTTCCEEEEEEECSCC
T ss_pred CCeecccccc------ccCCCCEEEEeCCCCeEEEEEC-----------------CCCEEEEEECCCCeEEEEEeccCCC
Confidence 3 2 1221 246789999999 899999876 467999999987776 33322 23
Q ss_pred cCcceEEEecCCCEEEEEeCCCCeEEEEEccCC--CCcceeeeccC--C------------CCCCceeEE---------c
Q 017371 219 YFANGVALSRDEDYVVVCESWKFRCRKYWLKGE--RKGKLETFAEN--L------------PGAPDNINL---------A 273 (372)
Q Consensus 219 ~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~--~------------~g~p~~i~~---------d 273 (372)
..+.++++++++++|||+++.+++|++++.++. .......+... . ...|.++++ |
T Consensus 273 ~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 273 GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 345679999999999999999999999987642 22222222211 1 124788999 9
Q ss_pred CCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECC--------CC-----
Q 017371 274 PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDP--------TG----- 340 (372)
Q Consensus 274 ~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~--------~g----- 340 (372)
.+|+|||++.. +++|.+++++|++....... +|
T Consensus 353 ~~g~lyvaD~~----------------------------------n~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~ 398 (433)
T 4hw6_A 353 DEYDFYFCDRD----------------------------------SHTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQ 398 (433)
T ss_dssp CCEEEEEEETT----------------------------------TTEEEEECTTSEEEEEECCCTTCSSCCBCEETTTT
T ss_pred CCCcEEEEECC----------------------------------CCEEEEECCCCCEEEEEeCCCCCccccCCCccccc
Confidence 99999999987 57899999999776655432 11
Q ss_pred CeeccceeeEEE--CCEEEEEeCCCCeEEEEeCC
Q 017371 341 QLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 341 ~~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~~ 372 (372)
..++.+.+++.+ +|+||+++..+++|.+++++
T Consensus 399 ~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 399 ALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 136678899988 69999999999999999875
No 8
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.92 E-value=7.6e-23 Score=187.85 Aligned_cols=230 Identities=19% Similarity=0.230 Sum_probs=174.7
Q ss_pred eEecCCCCCCCccEEEcCCCcEEEEe-cCCeEEEEe-CCceEEEEecCCCcccCeEEcCCCCEEEEeCC-Cc--EEEEc-
Q 017371 71 IKVGEGSVNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NG--LHKVS- 144 (372)
Q Consensus 71 ~~~~~g~~~~p~~i~~d~~G~l~v~~-~~g~i~~~~-~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~g--v~~~~- 144 (372)
..++.+ ..||++++|++|+||+++ .+++|++++ +++...+....+.|. +++++++|+|||++.. .+ +++++
T Consensus 26 ~~~p~~--~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~-gia~~~dG~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 26 TSFPVN--TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVS-GLAFTSNGDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp EEECTT--CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEE-EEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred EeCCCC--CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCce-eEEEcCCCcEEEEeccCCcceEEEEcC
Confidence 344444 589999999999999999 789999999 777666656667899 9999999999999854 23 88888
Q ss_pred CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE---------
Q 017371 145 EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV--------- 214 (372)
Q Consensus 145 ~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~--------- 214 (372)
++| ++.+... +. ..++++++..+++++|++|. ..++||++|+.+++.++.
T Consensus 103 ~~g~~~~~~~~-~~--~~~~~g~~~~~~~~~~v~d~-----------------~~g~i~~~d~~~~~~~v~~~~~~~~~~ 162 (306)
T 2p4o_A 103 SDGTVETLLTL-PD--AIFLNGITPLSDTQYLTADS-----------------YRGAIWLIDVVQPSGSIWLEHPMLARS 162 (306)
T ss_dssp TTSCEEEEEEC-TT--CSCEEEEEESSSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred CCCeEEEEEeC-CC--ccccCcccccCCCcEEEEEC-----------------CCCeEEEEeCCCCcEeEEEECCccccc
Confidence 777 6655443 22 35678888888889999875 467999999876543332
Q ss_pred --eCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccC-CCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHH
Q 017371 215 --ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG-ERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMK 291 (372)
Q Consensus 215 --~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~ 291 (372)
...+..|||+ ++|+++||++++.+++|++|++++ .+.+..+.+... ..|++|++|++|++||++..
T Consensus 163 ~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~------- 231 (306)
T 2p4o_A 163 NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHI------- 231 (306)
T ss_dssp STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBT-------
T ss_pred cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCC-------
Confidence 1345678998 889999999999999999999975 334444455432 46999999999999999987
Q ss_pred HhhcchhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-----CCEEEEEeCCC
Q 017371 292 ILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-----DNHLYVISLTS 363 (372)
Q Consensus 292 ~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-----~g~L~igs~~~ 363 (372)
.+.|.+++++|+.......+.+ ...++++++. +++||+++..+
T Consensus 232 ---------------------------~~~V~~~~~~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 232 ---------------------------YNSVVRIAPDRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ---------------------------TCCEEEECTTCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ---------------------------CCeEEEECCCCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 5689999999987543222222 3467888874 37999999754
No 9
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.90 E-value=2.6e-21 Score=175.09 Aligned_cols=234 Identities=15% Similarity=0.264 Sum_probs=175.4
Q ss_pred CCCCCCCccEEEcCCCcEEEEe-cCCeEEEEe-CCceE-EEEec------CCCcccCeEE-cCCCCEEEEeC--CCcEEE
Q 017371 75 EGSVNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGTWV-NWKFI------DSQTLVGLTS-TKEGHLIICDN--ANGLHK 142 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G~l~v~~-~~g~i~~~~-~g~~~-~~~~~------~~~p~~gl~~-d~dG~l~v~~~--~~gv~~ 142 (372)
.|.+..|.+++++++|.+|+++ .+++|.+++ +++.. .+... ...|. ++++ +++|+|||++. ...|.+
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~-~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN-RVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEE-EEEEETTTTEEEEEECGGGCEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCce-EEEEEcCCCeEEEEcCCCCCEEEE
Confidence 3567889999999999999997 678999999 66543 33221 14678 9999 58999999985 467889
Q ss_pred EcCCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe--CCc
Q 017371 143 VSEDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGF 218 (372)
Q Consensus 143 ~~~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~--~~~ 218 (372)
++.+| ...+ .......|++|+++++|++|+++. ..++|+++|++......+. ..+
T Consensus 105 ~d~~g~~~~~~----~~~~~~~~~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~g~~~~~~~~~~~~ 163 (286)
T 1q7f_A 105 YNQYGQFVRKF----GATILQHPRGVTVDNKGRIIVVEC-----------------KVMRVIIFDQNGNVLHKFGCSKHL 163 (286)
T ss_dssp ECTTSCEEEEE----CTTTCSCEEEEEECTTSCEEEEET-----------------TTTEEEEECTTSCEEEEEECTTTC
T ss_pred ECCCCcEEEEe----cCccCCCceEEEEeCCCCEEEEEC-----------------CCCEEEEEcCCCCEEEEeCCCCcc
Confidence 98666 3333 112235688999999999999875 4578999998744444443 345
Q ss_pred cCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC-CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcch
Q 017371 219 YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSK 297 (372)
Q Consensus 219 ~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~-~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~ 297 (372)
..|++++++++|+ +|+++..+++|.+|+.++.. ...+... ....|.++++|++|++||++..
T Consensus 164 ~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~---~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~------------- 226 (286)
T 1q7f_A 164 EFPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNH------------- 226 (286)
T ss_dssp SSEEEEEECSSSE-EEEEEGGGTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECS-------------
T ss_pred CCcEEEEECCCCC-EEEEECCCCEEEEEcCCCCE---EEEEccCCccCCCcEEEECCCCCEEEEeCC-------------
Confidence 6799999999986 99999888999999986532 2223211 1246899999999999999976
Q ss_pred hHHHHHHhcCccccccccCCCce-EEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 298 LIKHVLAAYPKLFSQFITLGGGA-HLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 298 ~~r~~~~~~p~~~~~~~~~~~~~-~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
.+ .|..++++|+.+..+....+ ...+.++..+ +|+||+++. .+.|.++++
T Consensus 227 ---------------------~~~~i~~~~~~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~ 278 (286)
T 1q7f_A 227 ---------------------NNFNLTIFTQDGQLISALESKVK--HAQCFDVALMDDGSVVLASK-DYRLYIYRY 278 (286)
T ss_dssp ---------------------SSCEEEEECTTSCEEEEEEESSC--CSCEEEEEEETTTEEEEEET-TTEEEEEEC
T ss_pred ---------------------CCEEEEEECCCCCEEEEEcccCC--CCcceeEEECCCCcEEEECC-CCeEEEEEc
Confidence 44 89999999999888765432 2245677776 689999974 789988875
No 10
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=8.4e-22 Score=189.32 Aligned_cols=238 Identities=13% Similarity=0.097 Sum_probs=181.3
Q ss_pred CCCCCccEEEcC--CCcEEEEecCCeEEEEe-C-CceEEEEecCCCcccCeEEcCCCC-EEEEeCCC-----cEEEEcCC
Q 017371 77 SVNHPEDASMDK--NGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN-----GLHKVSED 146 (372)
Q Consensus 77 ~~~~p~~i~~d~--~G~l~v~~~~g~i~~~~-~-g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~-----gv~~~~~~ 146 (372)
.+..|.+|++|+ +|+||+++..++|.+++ + +.++.+......|. +|+++++|+ |||++... .++.++.+
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~-~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVR-TICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEE-EEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcc-eEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 477899999995 58999999668999999 4 56777777777899 999999998 99998632 46666655
Q ss_pred C-cE---EEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe--CCcc
Q 017371 147 G-VE---NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFY 219 (372)
Q Consensus 147 g-~~---~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~--~~~~ 219 (372)
| .. .+. .+..|+++++++ +|+||++|. ..++|+++++++++...+. ....
T Consensus 214 g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~-----------------~~~~V~~~~~~~~~~~~~~~~~~~~ 270 (430)
T 3tc9_A 214 SGFKVITELT------KGQNCNGAETHPINGELYFNSW-----------------NAGQVFRYDFTTQETTPLFTIQDSG 270 (430)
T ss_dssp GTSCSEEEEE------ECSSCCCEEECTTTCCEEEEET-----------------TTTEEEEEETTTTEEEEEEECSSSS
T ss_pred Cceeeeeeec------cCCCceEEEEeCCCCEEEEEEC-----------------CCCEEEEEECCCCcEEEEEEcCCCC
Confidence 5 32 222 246789999999 899999986 4679999999877763332 2345
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEccCC--CCcceeeeccC--------------CCCCCc-eeEE--------cC
Q 017371 220 FANGVALSRDEDYVVVCESWKFRCRKYWLKGE--RKGKLETFAEN--------------LPGAPD-NINL--------AP 274 (372)
Q Consensus 220 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~--~~~~~~~~~~~--------------~~g~p~-~i~~--------d~ 274 (372)
.|++++++++|++|||++..+++|++++.++. +......+... ....|. ++++ |+
T Consensus 271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~ 350 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSD 350 (430)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSC
T ss_pred cceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCC
Confidence 79999999999999999999999999998753 11111122111 012477 7888 57
Q ss_pred CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECC--------CC-----C
Q 017371 275 DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDP--------TG-----Q 341 (372)
Q Consensus 275 ~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~--------~g-----~ 341 (372)
+|+|||++.. ++.|.+++++|++....... +| .
T Consensus 351 ~g~lyvaD~~----------------------------------n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~ 396 (430)
T 3tc9_A 351 EYDFYFCDRE----------------------------------NHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEA 396 (430)
T ss_dssp CEEEEEEEGG----------------------------------GTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTC
T ss_pred CCeEEEEECC----------------------------------CcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhc
Confidence 7999999987 57899999999877666541 12 1
Q ss_pred eeccceeeEEE--CCEEEEEeCCCCeEEEEeCC
Q 017371 342 LMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 342 ~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~~ 372 (372)
.++.+..++.+ +++||+++..+++|.+++++
T Consensus 397 ~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 397 RFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp BCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 36678999988 48999999999999999865
No 11
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.90 E-value=1.3e-21 Score=175.17 Aligned_cols=230 Identities=17% Similarity=0.211 Sum_probs=169.9
Q ss_pred CCccEEEcCCCcEEE-Ee-cCCeEEEEe-CC-ceEEEEe-cCCCcccCeEEcCCCCEEEEeCCCcEEEEcCCC--cEEEe
Q 017371 80 HPEDASMDKNGVIYT-AT-RDGWIKRLQ-DG-TWVNWKF-IDSQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENFL 152 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v-~~-~~g~i~~~~-~g-~~~~~~~-~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g--~~~l~ 152 (372)
.|++|++|++|+||+ ++ .+++|.+++ ++ ....+.. ....|. +++++++|+|||++...+|++++.++ ...+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQ-GLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCC-CEEECTTCCEEEEETTTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcc-eeEECCCCCEEEEcCCCEEEEEeCCCceEeeee
Confidence 999999999999999 85 678999998 33 3222222 235788 99999999999998756799999555 33221
Q ss_pred eecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE-eCCccCcceEEEecCCC
Q 017371 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRDED 231 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~-~~~~~~~~gi~~~~dg~ 231 (372)
...+..+.+|+++++|++|+++. ..++|++++..+...... ...+..|++++++++|+
T Consensus 104 ----~~~~~~p~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 104 ----FDGLNYPEGLAVDTQGAVYVADR-----------------GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN 162 (270)
T ss_dssp ----CCSCSSEEEEEECTTCCEEEEEG-----------------GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC
T ss_pred ----cCCcCCCcceEECCCCCEEEEEC-----------------CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC
Confidence 12235688999999999999875 357899998765443332 23456899999999997
Q ss_pred EEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCcccc
Q 017371 232 YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 311 (372)
Q Consensus 232 ~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~ 311 (372)
+|+++..+++|.+|+.++.... .........|.+|++|++|++|+++..
T Consensus 163 -l~v~~~~~~~i~~~~~~~~~~~---~~~~~~~~~p~~i~~d~~g~l~v~~~~--------------------------- 211 (270)
T 1rwi_B 163 -VYVTDTDNNRVVKLEAESNNQV---VLPFTDITAPWGIAVDEAGTVYVTEHN--------------------------- 211 (270)
T ss_dssp -EEEEEGGGTEEEEECTTTCCEE---ECCCSSCCSEEEEEECTTCCEEEEETT---------------------------
T ss_pred -EEEEECCCCEEEEEecCCCceE---eecccCCCCceEEEECCCCCEEEEECC---------------------------
Confidence 9999988889999998764211 111111146899999999999999976
Q ss_pred ccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeCC
Q 017371 312 QFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 312 ~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~~ 372 (372)
.+.|.+++++++....... .+ +..+.++..+ +|+||+++..++.|.+++++
T Consensus 212 -------~~~v~~~~~~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 212 -------TNQVVKLLAGSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp -------TSCEEEECTTCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred -------CCcEEEEcCCCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 4679999988876544222 12 3467888886 58999999999999999864
No 12
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.90 E-value=7.7e-21 Score=181.58 Aligned_cols=237 Identities=13% Similarity=0.078 Sum_probs=176.3
Q ss_pred CCCCCccEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCCC--cEEEEcC-CC-c
Q 017371 77 SVNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN--GLHKVSE-DG-V 148 (372)
Q Consensus 77 ~~~~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~--gv~~~~~-~g-~ 148 (372)
.+..|.+|++|++|+||+++ .+++|.+++ ++.+..+......+. ++++++|+ ||+++... .+++++. .+ .
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred ccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 47789999999999999999 568999999 467777766544443 89999986 78887643 6999994 44 3
Q ss_pred -EEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE----eCCcc--C
Q 017371 149 -ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV----ADGFY--F 220 (372)
Q Consensus 149 -~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~----~~~~~--~ 220 (372)
..+. .........++++++++ +|+||+++ ..++|+++|++++....+ ..+.. .
T Consensus 207 ~~~~g-~~~~~~~~~p~~iav~p~~g~lyv~d------------------~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 207 PTRIG-QLGSTFSGKIGAVALDETEEWLYFVD------------------SNKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp EEEEE-ECCTTSCSCCCBCEECTTSSEEEEEC------------------TTCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred eEEee-eccchhcCCcEEEEEeCCCCeEEEEE------------------CCCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 2331 11111346789999999 79999964 356899999987776655 22222 2
Q ss_pred cc-eEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCC--------------CCCCceeEEcCCCCEEEEEe-c
Q 017371 221 AN-GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL--------------PGAPDNINLAPDGTFWIAII-K 284 (372)
Q Consensus 221 ~~-gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~--------------~g~p~~i~~d~~G~lwva~~-~ 284 (372)
|. +++++++++.||++++.+++|++++.++. ...+.... ...|.+|++|++|+|||++. .
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~ 343 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK 343 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC
Confidence 44 99999987789999999999999998764 11221111 23599999999999999998 7
Q ss_pred CchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEEC-CCCcEEEEEECC------CC----CeeccceeeEEE-
Q 017371 285 LDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDP------TG----QLMSFVTSGLQV- 352 (372)
Q Consensus 285 ~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~------~g----~~~~~~t~~~~~- 352 (372)
++.|.+++ ++|++......+ +| ..++.+.+++.+
T Consensus 344 ----------------------------------~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~ 389 (409)
T 3hrp_A 344 ----------------------------------GYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG 389 (409)
T ss_dssp ----------------------------------TCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS
T ss_pred ----------------------------------CCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC
Confidence 57899999 788876555431 11 125678889887
Q ss_pred CCEEEEEeCCCCeEEEEeCC
Q 017371 353 DNHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 353 ~g~L~igs~~~~~i~~~~~~ 372 (372)
+|+||++...++.|.++.++
T Consensus 390 ~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 390 EGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp SSEEEEEESTTCEEEEEEEC
T ss_pred CCCEEEEECCCCeEEEEEeC
Confidence 59999999999999999875
No 13
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.90 E-value=6.4e-21 Score=176.58 Aligned_cols=242 Identities=17% Similarity=0.166 Sum_probs=180.5
Q ss_pred CceEecCCCCCCCccEEEcCC-CcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc
Q 017371 69 DFIKVGEGSVNHPEDASMDKN-GVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS 144 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~-G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~ 144 (372)
+++.+......-+|+.+++++ +.+|+.+ .+++|++++ +++.+.+.. ...+. +++++++|++|++. ..||++++
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~~~v~-~i~~~~dg~l~v~~-~~gl~~~d 115 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL-PFMGS-ALAKISDSKQLIAS-DDGLFLRD 115 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC-SSCEE-EEEEEETTEEEEEE-TTEEEEEE
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC-CCcce-EEEEeCCCeEEEEE-CCCEEEEE
Confidence 456666655567899999985 6788887 678999999 555655543 35677 99999999999997 46899999
Q ss_pred -CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc
Q 017371 145 -EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN 222 (372)
Q Consensus 145 -~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~ 222 (372)
.+| .+.+.....+.....++++++|++|++|+++.... .....++||+++ +++.+.+......++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~--~g~~~~~~~~~~~~~ 182 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA--KGKVTKLFADISIPN 182 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE--TTEEEEEEEEESSEE
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe--CCcEEEeeCCCcccC
Confidence 567 66554322223345688999999999999864210 012457899999 478777666667899
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEcc--CC-CCcceeeecc--CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcch
Q 017371 223 GVALSRDEDYVVVCESWKFRCRKYWLK--GE-RKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSK 297 (372)
Q Consensus 223 gi~~~~dg~~l~v~~~~~~~i~~~~~~--g~-~~~~~~~~~~--~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~ 297 (372)
++++++|++.+|++++..++|++|+.+ +. +......+.. ...+.|+++++|++|++|+++..
T Consensus 183 ~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~------------- 249 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG------------- 249 (326)
T ss_dssp EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET-------------
T ss_pred CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC-------------
Confidence 999999999999999988899999985 33 3333333322 23457999999999999999976
Q ss_pred hHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE--C-CEEEEEeCCCC
Q 017371 298 LIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--D-NHLYVISLTSN 364 (372)
Q Consensus 298 ~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~-g~L~igs~~~~ 364 (372)
.+.|.+++++|+.+..+..+.. .++++.+. + ++||+++....
T Consensus 250 ---------------------~~~v~~~d~~g~~~~~i~~~~~----~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 250 ---------------------EGAVDRYDTDGNHIARYEVPGK----QTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ---------------------TTEEEEECTTCCEEEEEECSCS----BEEEEEEESTTSCEEEEEEBCTT
T ss_pred ---------------------CCEEEEECCCCCEEEEEECCCC----CcEEEEEecCCCCEEEEEecCCC
Confidence 4689999999999888876643 46777765 2 68999997763
No 14
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.90 E-value=6.1e-21 Score=176.37 Aligned_cols=246 Identities=19% Similarity=0.239 Sum_probs=179.1
Q ss_pred CCCCccEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEE-ecCCCcccCeEEcCCCCEEEEeCCC-----cEEEEc-CCC
Q 017371 78 VNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWK-FIDSQTLVGLTSTKEGHLIICDNAN-----GLHKVS-EDG 147 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~-~~~~~p~~gl~~d~dG~l~v~~~~~-----gv~~~~-~~g 147 (372)
...|++++++++|+||+++ .++.|++++ +++.+.+. .....+. +++++++|+||+++... +|++++ ..+
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPA-AIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEE-EEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcc-eEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 5689999999999999876 678999999 56666654 3446778 99999999999998654 799999 444
Q ss_pred -cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEE
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 226 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~ 226 (372)
.+.+.... .....+++++++++|++|+++... ......++|+++|+++++.+.+......++++++
T Consensus 123 ~~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~-----------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 189 (333)
T 2dg1_A 123 NLQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRG-----------YSTNPLGGVYYVSPDFRTVTPIIQNISVANGIAL 189 (333)
T ss_dssp SCEEEECSS--SSCCCEEEEEECTTSCEEEEECCC-----------BTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEE
T ss_pred EEEEEEccC--ccCCcccceEECCCCCEEEEeccc-----------cccCCCceEEEEeCCCCEEEEeecCCCcccceEE
Confidence 54332211 122468899999999999987521 0012357899999987777776666677899999
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccC--CCCcce--eeeccC-CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHH
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKG--ERKGKL--ETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKH 301 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g--~~~~~~--~~~~~~-~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~ 301 (372)
++||+.+|++++..++|++|+++. ...... ..+... ....|+++++|++|++|+++..
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~----------------- 252 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG----------------- 252 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-----------------
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-----------------
Confidence 999999999998888999999853 221111 111111 1136899999999999999976
Q ss_pred HHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCC--CeeccceeeEEE-C-CEEEEEeCCC-----CeEEEEeC
Q 017371 302 VLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTG--QLMSFVTSGLQV-D-NHLYVISLTS-----NFIGKVQL 371 (372)
Q Consensus 302 ~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g--~~~~~~t~~~~~-~-g~L~igs~~~-----~~i~~~~~ 371 (372)
.+.|.+++++|+.+..+..+.. ..+..++++... + ++||+++..+ ..|.++++
T Consensus 253 -----------------~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 253 -----------------QGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp -----------------TTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred -----------------CCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 4689999999999888876532 012245666664 4 6999999874 36766664
No 15
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.89 E-value=3.9e-20 Score=167.55 Aligned_cols=230 Identities=17% Similarity=0.244 Sum_probs=175.7
Q ss_pred CCCCccEEEcCCCcEEEEe-cCCeEEEEe-CCceEEEEec--CCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC-cEEE
Q 017371 78 VNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENF 151 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~-~~g~i~~~~-~g~~~~~~~~--~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g-~~~l 151 (372)
...|++|++|++|.+|+++ .+++|.+++ ++++..+... ...|. +++++++|++|+++.. .+|.+++.+| ...+
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~ 97 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVM-CLIVSSLGDIWFTENGANKIGKLSKKGGFTEY 97 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcce-eEEECCCCCEEEEecCCCeEEEECCCCCeEEe
Confidence 5789999999999999999 578999999 7666665432 35688 9999999999999874 5699999557 5443
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe--CCccCcceEEEecC
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 229 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~--~~~~~~~gi~~~~d 229 (372)
... . ....+.+++++++|++|+++. ..++|+++|++ ++...+. .....|++++++++
T Consensus 98 ~~~--~-~~~~~~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 98 PLP--Q-PDSGPYGITEGLNGDIWFTQL-----------------NGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp ECS--S-TTCCEEEEEECSTTCEEEEET-----------------TTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred cCC--C-CCCCCccceECCCCCEEEEcc-----------------CCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 221 1 124688999999999999865 35789999998 7665442 23567899999999
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeeec-cCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETFA-ENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~-~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
|+ +|+++..+++|++++.++. ...+. ......|.++++|++|++|+++..
T Consensus 157 g~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~------------------------ 207 (300)
T 2qc5_A 157 NA-LWFTENQNNSIGRITNTGK----LEEYPLPTNAAAPVGITSGNDGALWFVEIM------------------------ 207 (300)
T ss_dssp SS-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECTTSSEEEEETT------------------------
T ss_pred CC-EEEEecCCCeEEEECCCCc----EEEeeCCCCCCCcceEEECCCCCEEEEccC------------------------
Confidence 98 9999988889999987442 22221 122246899999999999999976
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 309 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|.+++++|+.... ..+.+ ...+.++..+ +|+||+++...+.|.+++.
T Consensus 208 ----------~~~i~~~~~~g~~~~~-~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 208 ----------GNKIGRITTTGEISEY-DIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp ----------TTEEEEECTTCCEEEE-ECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred ----------CCEEEEEcCCCcEEEE-ECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 4589999998877653 33322 3456778877 6899999999999999874
No 16
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.88 E-value=4.3e-20 Score=167.29 Aligned_cols=228 Identities=16% Similarity=0.196 Sum_probs=172.5
Q ss_pred CCCCccEEEcCCCcEEEEec-CCeEEEEe-CCceEEEEe--cCCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC-cEEE
Q 017371 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWKF--IDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENF 151 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~~-~g~i~~~~-~g~~~~~~~--~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g-~~~l 151 (372)
...|.+|++|++|++|+++. +++|++++ +++...+.. ....|. +++++++|+||+++.. .++++++.+| ...+
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 139 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPY-GITEGLNGDIWFTQLNGDRIGKLTADGTIYEY 139 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECSTTCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCc-cceECCCCCEEEEccCCCeEEEECCCCCEEEc
Confidence 46899999999999999984 78899999 777765543 235688 9999999999999864 5799999557 5443
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe--CCccCcceEEEecC
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 229 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~--~~~~~~~gi~~~~d 229 (372)
.. +. ....++++++|++|++|+++. ..++|+++|+ +++...+. .....|.+++++++
T Consensus 140 ~~--~~-~~~~~~~i~~d~~g~l~v~~~-----------------~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 140 DL--PN-KGSYPAFITLGSDNALWFTEN-----------------QNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGND 198 (300)
T ss_dssp EC--SS-TTCCEEEEEECTTSSEEEEET-----------------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred cC--CC-CCCCceeEEECCCCCEEEEec-----------------CCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCC
Confidence 21 11 235788999999999999875 3578999998 46665543 34567889999999
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeee-ccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETF-AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~-~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
|+ +|+++...++|.+++.++. ...+ .......|.++++|++|++|+++..
T Consensus 199 g~-l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~------------------------ 249 (300)
T 2qc5_A 199 GA-LWFVEIMGNKIGRITTTGE----ISEYDIPTPNARPHAITAGKNSEIWFTEWG------------------------ 249 (300)
T ss_dssp SS-EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECSTTCEEEEETT------------------------
T ss_pred CC-EEEEccCCCEEEEEcCCCc----EEEEECCCCCCCceEEEECCCCCEEEeccC------------------------
Confidence 86 9999988889999987432 2222 1122345889999999999999965
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 309 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|.+++++|+.. .+..+.+ ...+.++..+ +|+||+++. + .|.+++.
T Consensus 250 ----------~~~i~~~~~~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 250 ----------ANQIGRITNDNTIQ-EYQLQTE--NAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp ----------TTEEEEECTTSCEE-EEECCST--TCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred ----------CCeEEEECCCCcEE-EEECCcc--CCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 46899999988765 4444433 2346777776 689999998 6 9988875
No 17
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.88 E-value=1.1e-19 Score=164.51 Aligned_cols=230 Identities=16% Similarity=0.264 Sum_probs=174.4
Q ss_pred CCCCccEEEcCCCcEEEEec-CCeEEEEe-CCceEEEEe--cCCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC-cEEE
Q 017371 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWKF--IDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENF 151 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~~-~g~i~~~~-~g~~~~~~~--~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g-~~~l 151 (372)
...|++|++|++|++|+++. ++.|.+++ ++++..+.. ....|. +++++++|++|+++.. .++++++.++ .+.+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVM-CLTISSDGEVWFTENAANKIGRITKKGIIKEY 92 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCcee-eEEECCCCCEEEeCCCCCeEEEECCCCcEEEE
Confidence 56899999999999999995 78899999 776666543 245688 9999999999999874 5699999657 5544
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe--CCccCcceEEEecC
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 229 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~--~~~~~~~gi~~~~d 229 (372)
... .....+.+++++++|++|+++. ..++|+++|+ +++...+. .....|++++++++
T Consensus 93 ~~~---~~~~~~~~i~~~~~g~l~v~~~-----------------~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 93 TLP---NPDSAPYGITEGPNGDIWFTEM-----------------NGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp ECS---STTCCEEEEEECTTSCEEEEET-----------------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred eCC---CcCCCceeeEECCCCCEEEEec-----------------CCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC
Confidence 321 1234688999999999999865 3578999999 56666543 23567899999999
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeee-ccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETF-AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~-~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
|+ +|+++...++|++++.++ + ...+ .......|.++++|++|++|+++..
T Consensus 152 g~-l~v~~~~~~~i~~~~~~g-~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------------------------ 202 (299)
T 2z2n_A 152 NA-LWFTENQNNAIGRITESG-D---ITEFKIPTPASGPVGITKGNDDALWFVEII------------------------ 202 (299)
T ss_dssp SC-EEEEETTTTEEEEECTTC-C---EEEEECSSTTCCEEEEEECTTSSEEEEETT------------------------
T ss_pred CC-EEEEeCCCCEEEEEcCCC-c---EEEeeCCCCCCcceeEEECCCCCEEEEccC------------------------
Confidence 86 999998888999998733 2 2222 1122235889999999999999975
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 309 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|.+++++|+... +..+.. ...+.++.++ +|+||+++...+.|.+++.
T Consensus 203 ----------~~~i~~~~~~g~~~~-~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 203 ----------GNKIGRITTSGEITE-FKIPTP--NARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp ----------TTEEEEECTTCCEEE-EECSST--TCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred ----------CceEEEECCCCcEEE-EECCCC--CCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 458999999877654 444322 3457788876 6899999998999999875
No 18
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.88 E-value=9.3e-20 Score=164.98 Aligned_cols=229 Identities=14% Similarity=0.198 Sum_probs=172.0
Q ss_pred CCCCccEEEcCCCcEEEEec-CCeEEEEe-CCceEEEEe--cCCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC-cEEE
Q 017371 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWKF--IDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENF 151 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~~-~g~i~~~~-~g~~~~~~~--~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g-~~~l 151 (372)
...|.+|++|++|.+|+++. +++|++++ +++.+.+.. ....|. +++++++|+||+++.. .++++++.+| ...+
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~ 134 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPY-GITEGPNGDIWFTEMNGNRIGRITDDGKIREY 134 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEEEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCce-eeEECCCCCEEEEecCCceEEEECCCCCEEEe
Confidence 35799999999999999984 78899999 777766653 345788 9999999999999864 5799999766 5443
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe--CCccCcceEEEecC
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--DGFYFANGVALSRD 229 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~--~~~~~~~gi~~~~d 229 (372)
... .....+++++++++|++|+++. ..++|+++|+ +++++.+. .....|.+++++++
T Consensus 135 ~~~---~~~~~~~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~ 193 (299)
T 2z2n_A 135 ELP---NKGSYPSFITLGSDNALWFTEN-----------------QNNAIGRITE-SGDITEFKIPTPASGPVGITKGND 193 (299)
T ss_dssp ECS---STTCCEEEEEECTTSCEEEEET-----------------TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred cCC---CCCCCCceEEEcCCCCEEEEeC-----------------CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC
Confidence 221 1234688999999999999864 3578999999 67776542 34567889999999
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeee-ccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETF-AENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~-~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
|+ +|+++...++|.+++.++ + ...+ .......|.++++|++|++|+++..
T Consensus 194 g~-l~v~~~~~~~i~~~~~~g-~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------------------------ 244 (299)
T 2z2n_A 194 DA-LWFVEIIGNKIGRITTSG-E---ITEFKIPTPNARPHAITAGAGIDLWFTEWG------------------------ 244 (299)
T ss_dssp SS-EEEEETTTTEEEEECTTC-C---EEEEECSSTTCCEEEEEECSTTCEEEEETT------------------------
T ss_pred CC-EEEEccCCceEEEECCCC-c---EEEEECCCCCCCceeEEECCCCCEEEeccC------------------------
Confidence 87 999998888999999833 2 2222 1112246889999999999999865
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 309 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|.+++++|+. ..+..+.+ ...+.++.+.+|+||+++. .+.|.+++.
T Consensus 245 ----------~~~i~~~d~~g~~-~~~~~~~~--~~~~~~i~~~~g~l~v~~~-~~~l~~~~~ 293 (299)
T 2z2n_A 245 ----------ANKIGRLTSNNII-EEYPIQIK--SAEPHGICFDGETIWFAME-CDKIGKLTL 293 (299)
T ss_dssp ----------TTEEEEEETTTEE-EEEECSSS--SCCEEEEEECSSCEEEEET-TTEEEEEEE
T ss_pred ----------CceEEEECCCCce-EEEeCCCC--CCccceEEecCCCEEEEec-CCcEEEEEc
Confidence 4689999988764 44544432 2345666666699999987 688988874
No 19
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=2.3e-20 Score=172.88 Aligned_cols=241 Identities=13% Similarity=0.129 Sum_probs=169.3
Q ss_pred CCCCCCccEEEcCCCcEEEEecCC-------------------------eEEEEe--CCceEEEEe--cCCCcccCeEEc
Q 017371 76 GSVNHPEDASMDKNGVIYTATRDG-------------------------WIKRLQ--DGTWVNWKF--IDSQTLVGLTST 126 (372)
Q Consensus 76 g~~~~p~~i~~d~~G~l~v~~~~g-------------------------~i~~~~--~g~~~~~~~--~~~~p~~gl~~d 126 (372)
..+..|.+|++|++|++|+++..+ .|++++ +|++..... ....|. +++++
T Consensus 21 ~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~-gia~d 99 (329)
T 3fvz_A 21 LLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPH-GLSID 99 (329)
T ss_dssp CCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEE-EEEEC
T ss_pred eecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCce-EEEEC
Confidence 346789999999999999998433 699998 477654322 234789 99999
Q ss_pred CCCCEEEEeCC-CcEEEEcCCC-c---EEEeee-cC---CcccccccceEEcc-CCcEEEEeCCCCCCCccccccccccc
Q 017371 127 KEGHLIICDNA-NGLHKVSEDG-V---ENFLSY-VN---GSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGK 196 (372)
Q Consensus 127 ~dG~l~v~~~~-~gv~~~~~~g-~---~~l~~~-~~---~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~ 196 (372)
++|+|||++.. ..|.+++.+| . ..+... .. ...+..|++|++++ +|+||++|..
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~---------------- 163 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY---------------- 163 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS----------------
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC----------------
Confidence 99999999876 5688898655 2 222211 01 12355789999999 8999999851
Q ss_pred CCCeEEEEeCCCCeEEEEeC-----------CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc-CCC
Q 017371 197 PHGQLLKYDPSSNITTLVAD-----------GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NLP 264 (372)
Q Consensus 197 ~~g~v~~~d~~t~~~~~~~~-----------~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~-~~~ 264 (372)
..++|+++|++ ++...... .+..|++++++++++.+||++..+++|.+|+.++.+. ...+.. ...
T Consensus 164 ~~~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~~~~~~ 240 (329)
T 3fvz_A 164 CNSRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREIKHASFG 240 (329)
T ss_dssp SCCEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEECCTTTT
T ss_pred CCCeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEEeccccC
Confidence 36789999976 54443321 3456999999999777999999999999999872221 112211 111
Q ss_pred CCCceeEEcC------CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEEC-CCCcEEEEEEC
Q 017371 265 GAPDNINLAP------DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVD 337 (372)
Q Consensus 265 g~p~~i~~d~------~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~ 337 (372)
..|.++++.+ +|++|+++.. ...+..++ .+|+.+..+..
T Consensus 241 ~~~~~~~~~pg~~~~~~g~~~v~~~~----------------------------------~~~v~~~~~~~g~~~~~~~~ 286 (329)
T 3fvz_A 241 RNVFAISYIPGFLFAVNGKPYFGDQE----------------------------------PVQGFVMNFSSGEIIDVFKP 286 (329)
T ss_dssp TCEEEEEEETTEEEEEECCCCTTCSC----------------------------------CCCEEEEETTTCCEEEEECC
T ss_pred CCcceeeecCCEEEEeCCCEEeccCC----------------------------------CcEEEEEEcCCCeEEEEEcC
Confidence 2244444444 5555555443 44677777 67999888764
Q ss_pred CCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 338 PTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 338 ~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
..+. +..+.++..+ +|+||+++..++.|.++++
T Consensus 287 ~~~~-~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 287 VRKH-FDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp SSSC-CSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred CCCc-cCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 3332 6678888887 5899999999999999985
No 20
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.86 E-value=5.1e-20 Score=171.67 Aligned_cols=243 Identities=14% Similarity=0.144 Sum_probs=169.2
Q ss_pred ceEecCCCCCCCccEEEcCCCcEEEEec---CC--eEEEEeCCceEEEEe-------cCCCcccCeEEcCCCCEEEEeCC
Q 017371 70 FIKVGEGSVNHPEDASMDKNGVIYTATR---DG--WIKRLQDGTWVNWKF-------IDSQTLVGLTSTKEGHLIICDNA 137 (372)
Q Consensus 70 ~~~~~~g~~~~p~~i~~d~~G~l~v~~~---~g--~i~~~~~g~~~~~~~-------~~~~p~~gl~~d~dG~l~v~~~~ 137 (372)
++.+.... ..|++|+++++|++|++.. +| +|+.+++|++..+.. ....|. ++++|++|+|||++..
T Consensus 9 ~~~v~~~~-~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~-gv~~d~~g~L~v~D~g 86 (343)
T 2qe8_A 9 LEVVAELS-LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVL-GIKSDGNGIVWMLDNG 86 (343)
T ss_dssp CEEEEEES-SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEE-EEEECSSSEEEEEECH
T ss_pred eEEEEEcC-CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEee-EEEEcCCCcEEEEcCC
Confidence 34444332 5899999999999999962 34 788887665543321 124688 9999999999999864
Q ss_pred ------CcEEEEc-CCC--cEEEeee-cCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeC
Q 017371 138 ------NGLHKVS-EDG--VENFLSY-VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 206 (372)
Q Consensus 138 ------~gv~~~~-~~g--~~~l~~~-~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 206 (372)
..|+++| .+| ...+... .......+++++++|+ +|.+|++|.+. ...++|+++|+
T Consensus 87 ~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--------------~~~~~i~v~d~ 152 (343)
T 2qe8_A 87 NQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--------------DDKAALIRVDL 152 (343)
T ss_dssp HHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--------------GGGCEEEEEET
T ss_pred CCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--------------CCCCeEEEEEC
Confidence 5799999 667 3333221 1122335789999996 57999998631 12456778887
Q ss_pred CCCeEEEEeCC------------------------------ccCcceEEEecCCCEEEEEeCCCCeEEEEEcc---CCCC
Q 017371 207 SSNITTLVADG------------------------------FYFANGVALSRDEDYVVVCESWKFRCRKYWLK---GERK 253 (372)
Q Consensus 207 ~t~~~~~~~~~------------------------------~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~---g~~~ 253 (372)
++++...+..+ ...++|+++++||+.||++++...+|++++.+ ....
T Consensus 153 ~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~ 232 (343)
T 2qe8_A 153 QTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL 232 (343)
T ss_dssp TTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC
T ss_pred CCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC
Confidence 76665544321 02479999999999999999988899999853 1111
Q ss_pred cceeeec----cCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-C
Q 017371 254 GKLETFA----ENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-D 328 (372)
Q Consensus 254 ~~~~~~~----~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~ 328 (372)
...+.+. ....+.|+++++|++|++|++... .+.|.++++ +
T Consensus 233 ~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~----------------------------------~~~V~~~d~~~ 278 (343)
T 2qe8_A 233 TDAELGSKIERYSEKPICDGISIDKDHNIYVGDLA----------------------------------HSAIGVITSAD 278 (343)
T ss_dssp CHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGG----------------------------------GTEEEEEETTT
T ss_pred ChhhhhcceEecccCCCCceEEECCCCCEEEEccC----------------------------------CCeEEEEECCC
Confidence 1111110 012347999999999999999987 578999998 8
Q ss_pred CcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCe
Q 017371 329 GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNF 365 (372)
Q Consensus 329 g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~ 365 (372)
|+.......+ .+..++++.++ +++||+.+...+.
T Consensus 279 G~~~~~~~~~---~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 279 RAYKLLVTDE---KLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp TEEEEEEECG---GGSCEEEEEECTTSCEEEEECCGGG
T ss_pred CCEEEEEECC---ceecCCeeEECCCCcEEEEeCcccc
Confidence 9876555544 25578888886 6899999875543
No 21
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.84 E-value=6.2e-19 Score=165.01 Aligned_cols=258 Identities=15% Similarity=0.174 Sum_probs=172.6
Q ss_pred CceEecCCCCCCCccEEEcCCCcEEEEecCCeEEEEe-CCceEEEEe------cCCCcccCeEEcCC----CCEEEEeCC
Q 017371 69 DFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQ-DGTWVNWKF------IDSQTLVGLTSTKE----GHLIICDNA 137 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~g~i~~~~-~g~~~~~~~------~~~~p~~gl~~d~d----G~l~v~~~~ 137 (372)
.++++..+ +..|++|+++++|+||+++..|+|++++ +|+ +.+.. ..+.|+ ||+++++ |.|||+...
T Consensus 20 ~~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 20 KISEVASD-LEVPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLL-GLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp EEEEEECS-CSCEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEE
T ss_pred EEEEEeCC-CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCcee-eEEeCCCCCcCCEEEEEEec
Confidence 46677766 8899999999999999999889999998 776 54432 235688 9999986 899999763
Q ss_pred --------CcEEEEc-CCC------cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEE
Q 017371 138 --------NGLHKVS-EDG------VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLL 202 (372)
Q Consensus 138 --------~gv~~~~-~~g------~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~ 202 (372)
..|.+++ ..+ .+.+....+....+.+++|++++||+||+++..... ... ........|+|+
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~--~~~--~~d~~~~~G~I~ 172 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAAD--PRL--AQDLSSLAGKIL 172 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTC--GGG--GTCTTCCSSEEE
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCC--Ccc--ccCCCCCCeEEE
Confidence 5688888 322 233333334444567899999999999999643110 000 001123468999
Q ss_pred EEeCCCC--------eEEEEeCCccCcceEEEecCCCEEEEEeCCCCe---EEEEEccCCCCc------------ceeee
Q 017371 203 KYDPSSN--------ITTLVADGFYFANGVALSRDEDYVVVCESWKFR---CRKYWLKGERKG------------KLETF 259 (372)
Q Consensus 203 ~~d~~t~--------~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~---i~~~~~~g~~~~------------~~~~~ 259 (372)
|+++++. ..+++..++.+|+|++++++...||+++.+.++ |.++.. |...+ .....
T Consensus 173 ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~g~~~~~~~~~p~ 251 (354)
T 3a9g_A 173 RVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLATGKAGRGEFVDPV 251 (354)
T ss_dssp EECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCCSCCCCTTSCCCS
T ss_pred EEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCcccCCCCCCCCcCCE
Confidence 9999843 356788899999999999954459999987754 555432 22111 00011
Q ss_pred cc--CCCCCCceeEE-------cCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC--
Q 017371 260 AE--NLPGAPDNINL-------APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-- 328 (372)
Q Consensus 260 ~~--~~~g~p~~i~~-------d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~-- 328 (372)
.. .....|.++++ +.+|++|+++.. .+.|.+++.+
T Consensus 252 ~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~----------------------------------~~~v~~~~~~~~ 297 (354)
T 3a9g_A 252 IDTGSETWAPSGASFVHGDMFPGLRGWLLIACLR----------------------------------GSMLAAVNFGDN 297 (354)
T ss_dssp EECTTCCCCEEEEEECCSSSCGGGTTEEEEEETT----------------------------------TTEEEEEEECGG
T ss_pred eecCCCCcCCcceEEECCCCCcccCCcEEEEEcC----------------------------------CCEEEEEEECCC
Confidence 00 11235889998 578999999876 4567777654
Q ss_pred CcEE--EEEECCCCCeeccceeeEEE-CCEEEEEeCC-CC---------eEEEEeC
Q 017371 329 GTII--RNLVDPTGQLMSFVTSGLQV-DNHLYVISLT-SN---------FIGKVQL 371 (372)
Q Consensus 329 g~~~--~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~-~~---------~i~~~~~ 371 (372)
|+.. ..+-. +. ...+..+.+. +|.||+.+.. .. .|.|+..
T Consensus 298 g~~~~~~~~~~--~~-~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 298 MEVRKISTFFK--NV-FGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVS 350 (354)
T ss_dssp GCEEEEEEECT--TT-SCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred Ccccceeeecc--CC-CCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEec
Confidence 4443 22221 11 2346778876 6899999974 22 7888863
No 22
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=1.4e-18 Score=167.47 Aligned_cols=239 Identities=11% Similarity=0.112 Sum_probs=175.8
Q ss_pred CCCCCCccEEEcC--CCcEEEEec-CCeEEEEe--CCceEEEEecC----CCcccCeEE-------cCCCC-EEEEeCCC
Q 017371 76 GSVNHPEDASMDK--NGVIYTATR-DGWIKRLQ--DGTWVNWKFID----SQTLVGLTS-------TKEGH-LIICDNAN 138 (372)
Q Consensus 76 g~~~~p~~i~~d~--~G~l~v~~~-~g~i~~~~--~g~~~~~~~~~----~~p~~gl~~-------d~dG~-l~v~~~~~ 138 (372)
+.+..|..|++|| +++||++.. .++|.++| ++.+..+.... .+|. +|++ +++|+ |||++...
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~-~ia~~~~~~~~d~~G~~lyvad~~~ 214 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIR-SIAFNKKIEGYADEAEYMIVAIDYD 214 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEE-EEEECCCBTTTBCTTCEEEEEECCC
T ss_pred cccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCc-EEEEeecccccCCCCCEEEEEeCCC
Confidence 3466799999997 579999984 57899999 55777765432 3688 9999 99997 99998653
Q ss_pred -------cEEEEc--CCC-c------EEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeE
Q 017371 139 -------GLHKVS--EDG-V------ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQL 201 (372)
Q Consensus 139 -------gv~~~~--~~g-~------~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v 201 (372)
.++.++ .+| + ..+. ....|+++++++ +|.||+++. ..++|
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~-----------------~~g~V 271 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSY-----------------EKGQV 271 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEET-----------------TTTEE
T ss_pred CCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEEC-----------------CCCEE
Confidence 377776 335 3 2332 235789999999 689999986 56789
Q ss_pred EEEeCC-------CCeE------------EEEe--CCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCC--Ccceee
Q 017371 202 LKYDPS-------SNIT------------TLVA--DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER--KGKLET 258 (372)
Q Consensus 202 ~~~d~~-------t~~~------------~~~~--~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~--~~~~~~ 258 (372)
++||++ +++. +.+. .....|.+++++++|+.||++++.+++|++++.++.. ......
T Consensus 272 ~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~ 351 (496)
T 3kya_A 272 FRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYN 351 (496)
T ss_dssp EEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEE
T ss_pred EEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEE
Confidence 999987 5654 1221 2235578999999999999999999999999887632 111122
Q ss_pred eccC--CC------------CCCc-eeEEc-------CCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccC
Q 017371 259 FAEN--LP------------GAPD-NINLA-------PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 316 (372)
Q Consensus 259 ~~~~--~~------------g~p~-~i~~d-------~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 316 (372)
+... .. ..|. ++++| ++|+|||++..
T Consensus 352 ~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~-------------------------------- 399 (496)
T 3kya_A 352 FVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL-------------------------------- 399 (496)
T ss_dssp EEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG--------------------------------
T ss_pred ecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC--------------------------------
Confidence 2211 11 2477 78887 78999999988
Q ss_pred CCceEEEEECCCCcEEEEEECC--------------CC-----CeeccceeeEEE-C-CEEEEEeCCCCeEEEEeCC
Q 017371 317 GGGAHLIHVAEDGTIIRNLVDP--------------TG-----QLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 317 ~~~~~v~~~~~~g~~~~~~~~~--------------~g-----~~~~~~t~~~~~-~-g~L~igs~~~~~i~~~~~~ 372 (372)
+.+|.+++++|.+....... +| ..++.+++++.+ + |+|||++..+++|.+++++
T Consensus 400 --N~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 400 --NFCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp --GTEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred --CCEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 67999999999776554431 22 136778899988 3 8999999999999999864
No 23
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.83 E-value=5e-18 Score=158.66 Aligned_cols=227 Identities=12% Similarity=0.105 Sum_probs=171.5
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe-CC-ceEEEEecCCCcccCeEEc-CCCCEEEEeCC-CcEEEEcCCC--cEEEeee
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ-DG-TWVNWKFIDSQTLVGLTST-KEGHLIICDNA-NGLHKVSEDG--VENFLSY 154 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~-~g-~~~~~~~~~~~p~~gl~~d-~dG~l~v~~~~-~gv~~~~~~g--~~~l~~~ 154 (372)
-.+.+.++++.|++++.. .|.+++ ++ ..+.+......|. ++++| .++.||++|.. ..|++++.+| .+.+...
T Consensus 36 ~~C~~~~~~~~ll~~~~~-~I~~i~~~g~~~~~~~~~~~~~~-~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 36 RSCKALGPEPVLLFANRI-DIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp SCEEESSSCCEEEEECBS-CEEEECTTSCCEEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CcccccccCceeEeeccc-ceEEEeCCCCeeEEeecCCCceE-EEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 345666677788888644 599999 55 4555666677899 99999 56789999876 4588898555 4444321
Q ss_pred cCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCCE
Q 017371 155 VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDY 232 (372)
Q Consensus 155 ~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~~ 232 (372)
.+..|.+|++|. +|+||++|. ..++|.++++++...+.+. .++..|++++++|+++.
T Consensus 114 ----~~~~p~glavd~~~g~ly~~d~-----------------~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ 172 (349)
T 3v64_C 114 ----GLESPGGLAVDWVHDKLYWTDS-----------------GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGT 172 (349)
T ss_dssp ----SCSCCCEEEEETTTTEEEEEET-----------------TTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTE
T ss_pred ----CCCCccEEEEecCCCeEEEEcC-----------------CCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCe
Confidence 234688999996 689999987 3568999998855545444 56889999999998889
Q ss_pred EEEEeCCC-CeEEEEEccCCCCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccc
Q 017371 233 VVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 310 (372)
Q Consensus 233 l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~ 310 (372)
+||+++.. .+|++++++|.. ...+.......|++|++|+ +|+||+++..
T Consensus 173 ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~-------------------------- 223 (349)
T 3v64_C 173 IYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAK-------------------------- 223 (349)
T ss_dssp EEEEECSSSCEEEEEETTSCS---CEESCCSSCSCEEEEEEETTTTEEEEEETT--------------------------
T ss_pred EEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCcceEEEeCCCCEEEEEECC--------------------------
Confidence 99999988 999999998742 2233322334699999995 6789999987
Q ss_pred cccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEe
Q 017371 311 SQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 311 ~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~ 370 (372)
.+.|.+++.+|.....+-... +..+.++..++++||+++..++.|.+++
T Consensus 224 --------~~~I~~~~~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 224 --------HHVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp --------TTEEEEEETTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred --------CCEEEEEeCCCCceEEEEeCC---CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 568999998886554443322 4467788888899999999999999986
No 24
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.82 E-value=4.2e-18 Score=159.18 Aligned_cols=201 Identities=11% Similarity=0.121 Sum_probs=153.1
Q ss_pred CCCCccEEEc-CCCcEEEEe-cCCeEEEEe-CC-ceEEEE-ecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCCC--c
Q 017371 78 VNHPEDASMD-KNGVIYTAT-RDGWIKRLQ-DG-TWVNWK-FIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--V 148 (372)
Q Consensus 78 ~~~p~~i~~d-~~G~l~v~~-~~g~i~~~~-~g-~~~~~~-~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~g--~ 148 (372)
+..|.++++| .++.||+++ .+++|++++ +| ..+.+. .....|. ||++|+ .|+||+++.. ..|.+++.+| .
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 150 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc-EEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence 5789999999 578999999 688999999 55 344443 3346788 999995 6789999976 4688888666 4
Q ss_pred EEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEE
Q 017371 149 ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVAL 226 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~ 226 (372)
+.+.. ..+..|++|++|+ +|.||++|.. ..++|++++.++...+.+. .++..|+|+++
T Consensus 151 ~~l~~----~~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~ 210 (349)
T 3v64_C 151 KVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTI 210 (349)
T ss_dssp EEEEC----TTCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEESCCSSCSCEEEEEE
T ss_pred EEEEe----CCCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCcceEEE
Confidence 44432 1245789999997 6799999863 2378999999855555443 56888999999
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhc
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAY 306 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~ 306 (372)
+++++.|||+++..++|++++++|.. ...+.....+.|++|+++ +|++|++++.
T Consensus 211 d~~~~~lY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~---------------------- 264 (349)
T 3v64_C 211 DYAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWH---------------------- 264 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETT----------------------
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCCc---eEEEEeCCCCCceEEEEE-CCEEEEecCC----------------------
Confidence 99988999999999999999998742 223333334579999995 5789999987
Q ss_pred CccccccccCCCceEEEEEC-CCCcEEEEEEC
Q 017371 307 PKLFSQFITLGGGAHLIHVA-EDGTIIRNLVD 337 (372)
Q Consensus 307 p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~ 337 (372)
.+.|.+++ .+|+....+..
T Consensus 265 ------------~~~V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 265 ------------TKSINSANKFTGKNQEIIRN 284 (349)
T ss_dssp ------------TTEEEEEETTTCCSCEEEEC
T ss_pred ------------CCeEEEEEccCCCccEEecc
Confidence 56889998 67877666653
No 25
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.81 E-value=1.2e-17 Score=158.11 Aligned_cols=228 Identities=12% Similarity=0.112 Sum_probs=172.0
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe-C-CceEEEEecCCCcccCeEEc-CCCCEEEEeCC-CcEEEEcCCC--cEEEee
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTST-KEGHLIICDNA-NGLHKVSEDG--VENFLS 153 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~-~-g~~~~~~~~~~~p~~gl~~d-~dG~l~v~~~~-~gv~~~~~~g--~~~l~~ 153 (372)
+-.+.+.++++.|++++. ..|.+++ + +..+.+......|. ++++| .+++||++|.. ..|++++.+| .+.+..
T Consensus 78 ~~~C~~~~~~~~l~~~~~-~~I~~i~~~~~~~~~~~~~~~~~~-gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 78 RRSCKALGPEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp SSCEEECSSCCEEEEECB-SCEEEECTTSCCCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CCeECCccccceeEeecC-ccceeeccCCCcEEEEecCCCccE-EEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 344566667778888865 4699999 4 45666666777899 99999 46789999876 4588888555 444422
Q ss_pred ecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCC
Q 017371 154 YVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDED 231 (372)
Q Consensus 154 ~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~ 231 (372)
..+..|++|++|+ +|+||++|. ..++|.++++++...+.+. .++..|++++++|+++
T Consensus 156 ----~~~~~p~glavd~~~g~lY~~d~-----------------~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g 214 (386)
T 3v65_B 156 ----TGLESPGGLAVDWVHDKLYWTDS-----------------GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG 214 (386)
T ss_dssp ----SSCSCCCCEEEETTTTEEEEEET-----------------TTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred ----CCCCCccEEEEEeCCCeEEEEcC-----------------CCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCC
Confidence 1234788999996 689999987 3568999998755544443 5678999999999888
Q ss_pred EEEEEeCCC-CeEEEEEccCCCCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCcc
Q 017371 232 YVVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 309 (372)
Q Consensus 232 ~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~ 309 (372)
.|||++... .+|++++++|.. ...+.......|++|++|+ +|+||+++..
T Consensus 215 ~ly~td~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~------------------------- 266 (386)
T 3v65_B 215 TIYWTDWGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAK------------------------- 266 (386)
T ss_dssp EEEEEECSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETT-------------------------
T ss_pred eEEEeccCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECC-------------------------
Confidence 999999988 899999998752 2233323334699999994 6789999987
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEe
Q 017371 310 FSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 310 ~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~ 370 (372)
.+.|.+++.+|.....+.... +..+.++..++++||+++..++.|.+++
T Consensus 267 ---------~~~I~~~d~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 267 ---------HHVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp ---------TTEEEEECTTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred ---------CCEEEEEeCCCCeeEEEEECC---CCCceEEEEECCEEEEeeCCCCeEEEEE
Confidence 568999998886555443322 4467788888899999999999999987
No 26
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.81 E-value=5e-18 Score=158.82 Aligned_cols=250 Identities=16% Similarity=0.175 Sum_probs=164.9
Q ss_pred CceEecCCCCCCCccEEEcCCCcEEEEecCCeEEEEeCCceEEEEe------cCCCcccCeEEcCC----CCEEEEeCC-
Q 017371 69 DFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQDGTWVNWKF------IDSQTLVGLTSTKE----GHLIICDNA- 137 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~g~i~~~~~g~~~~~~~------~~~~p~~gl~~d~d----G~l~v~~~~- 137 (372)
.++.+..+ +..|++|+++++|+||+++..|+|+++++|+.+.+.. ..+.|+ ||+++++ |.|||++..
T Consensus 22 ~~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~-gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 22 RVEEVVGG-LEVPWALAFLPDGGMLIAERPGRIRLFREGRLSTYAELSVYHRGESGLL-GLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CEEEEECC-CSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEEECC-CCCceEEEEcCCCeEEEEeCCCeEEEEECCCccEeecceEeecCCCCce-eEEECCCCCCCCEEEEEEecC
Confidence 46677776 7899999999999999999889999999665544432 245788 9999997 789999763
Q ss_pred -----CcEEEEc-CCC----cEEEeeecC--CcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEe
Q 017371 138 -----NGLHKVS-EDG----VENFLSYVN--GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYD 205 (372)
Q Consensus 138 -----~gv~~~~-~~g----~~~l~~~~~--~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d 205 (372)
..|.+++ .++ .+.+....+ ....+.+++|++++||+||+++..... .... .......|+|+|++
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~--~~~~--~d~~~~~g~I~ri~ 175 (352)
T 2ism_A 100 EGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYE--RELA--QDLASLGGKILRLT 175 (352)
T ss_dssp TTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTC--GGGG--GCTTCSSSEEEEEC
T ss_pred CCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCC--Cccc--cCCCCCceEEEEEc
Confidence 4688888 433 233444334 334567899999999999999753110 0000 01123458999999
Q ss_pred CCC-------------CeEEEEeCCccCcceEEEecCCCEEEEEeCCCCe--------EEEEEccCCCCcc---------
Q 017371 206 PSS-------------NITTLVADGFYFANGVALSRDEDYVVVCESWKFR--------CRKYWLKGERKGK--------- 255 (372)
Q Consensus 206 ~~t-------------~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~--------i~~~~~~g~~~~~--------- 255 (372)
+++ ...+++..++.+|+|+++++++..||+++.+.++ |.++.. |...+.
T Consensus 176 ~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~-G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 176 PEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP-GGNYGWPRVVGRGND 254 (352)
T ss_dssp TTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECT-TCBCCTTTCCSCCCC
T ss_pred CCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc-CCcCCCCcccCCCCC
Confidence 974 2456677889999999999955559999987766 555432 221110
Q ss_pred ---eeeecc-CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC--C
Q 017371 256 ---LETFAE-NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--G 329 (372)
Q Consensus 256 ---~~~~~~-~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~--g 329 (372)
...... .....|.++++ .+|++|+++.. .+.|.+++.+ +
T Consensus 255 ~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~----------------------------------~~~v~~v~~~~~~ 299 (352)
T 2ism_A 255 PRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLR----------------------------------GQALLRLVLEGER 299 (352)
T ss_dssp TTSCCCSEECTTCCCEEEEEE-ETTEEEEEETT----------------------------------TTEEEEEEEEEET
T ss_pred CCCcCCeEecCCCCCCcceEE-ECCEEEEEECC----------------------------------CCEEEEEEECCCC
Confidence 000000 11124889998 67899999876 3466666543 3
Q ss_pred cE-----EEEEECCCCCeeccceeeEEE-CCEEEEEeCCCC
Q 017371 330 TI-----IRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSN 364 (372)
Q Consensus 330 ~~-----~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~ 364 (372)
.. ...+-.. ...+..+.+. +|.||+.+...+
T Consensus 300 ~~~~~~~~~~~~~~----~~rp~~v~~~pdG~lyv~~~~~~ 336 (352)
T 2ism_A 300 GRWRVLRVETALSG----FGRLREVQVGPDGALYVTTSNRD 336 (352)
T ss_dssp TEEEEEEEEEEEES----SCCEEEEEECTTSCEEEEECSTT
T ss_pred cceeecchheeccc----CCCeeEEEECCCCcEEEEEeCCC
Confidence 21 1222211 2346788886 699999997643
No 27
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.81 E-value=1.2e-17 Score=149.90 Aligned_cols=200 Identities=13% Similarity=0.094 Sum_probs=151.3
Q ss_pred CCCccEEEcC-CCcEEEEe-cCCeEEEEe-CCc-eEEEEe-cCCCcccCeEEcCC-CCEEEEeCC-CcEEEEcCCC--cE
Q 017371 79 NHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT-WVNWKF-IDSQTLVGLTSTKE-GHLIICDNA-NGLHKVSEDG--VE 149 (372)
Q Consensus 79 ~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~g~-~~~~~~-~~~~p~~gl~~d~d-G~l~v~~~~-~gv~~~~~~g--~~ 149 (372)
..|+++++|+ ++.||+++ .+++|++++ +|. .+.+.. ....|. ++++|++ |+||+++.. ..|.+++.+| .+
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~-~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPE-GIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCcc-EEEEEecCCeEEEEECCCCEEEEEEcCCCCEE
Confidence 4789999997 67999999 678999999 553 444433 336899 9999985 689999876 4688888655 44
Q ss_pred EEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEe
Q 017371 150 NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALS 227 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~ 227 (372)
.+... .+..|+++++|+ +|+||+++.. ...++|++++.+....+.+. ..+..|+|++++
T Consensus 115 ~~~~~----~~~~P~~i~vd~~~g~lyv~~~~---------------~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 115 VLFDT----GLVNPRGIVTDPVRGNLYWTDWN---------------RDNPKIETSHMDGTNRRILAQDNLGLPNGLTFD 175 (267)
T ss_dssp EEECS----SCSSEEEEEEETTTTEEEEEECC---------------SSSCEEEEEETTSCCCEEEECTTCSCEEEEEEE
T ss_pred EEEEC----CCCCccEEEEeeCCCEEEEEECC---------------CCCcEEEEEecCCCCcEEEEECCCCCCcEEEEc
Confidence 44221 135789999998 5899999752 12578999998754444443 567789999999
Q ss_pred cCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcC
Q 017371 228 RDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 307 (372)
Q Consensus 228 ~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p 307 (372)
++++.|||++...++|.++++++.. ...+.. ....|+++++| +|++|+++..
T Consensus 176 ~~~~~lyv~d~~~~~I~~~~~~g~~---~~~~~~-~~~~P~gi~~d-~~~lyva~~~----------------------- 227 (267)
T 1npe_A 176 AFSSQLCWVDAGTHRAECLNPAQPG---RRKVLE-GLQYPFAVTSY-GKNLYYTDWK----------------------- 227 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEETTEEE---EEEEEE-CCCSEEEEEEE-TTEEEEEETT-----------------------
T ss_pred CCCCEEEEEECCCCEEEEEecCCCc---eEEEec-CCCCceEEEEe-CCEEEEEECC-----------------------
Confidence 9999999999999999999987632 223333 23469999998 6899999987
Q ss_pred ccccccccCCCceEEEEECCC-CcEEEEEEC
Q 017371 308 KLFSQFITLGGGAHLIHVAED-GTIIRNLVD 337 (372)
Q Consensus 308 ~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~ 337 (372)
.+.|.+++++ |+.+..+..
T Consensus 228 -----------~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 228 -----------TNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp -----------TTEEEEEETTTTEEEEEECC
T ss_pred -----------CCeEEEEeCCCCCceEEEcc
Confidence 5689999985 888887754
No 28
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.80 E-value=1.3e-17 Score=154.33 Aligned_cols=211 Identities=12% Similarity=0.080 Sum_probs=151.6
Q ss_pred CCCCccEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCC------CcccCeEEcCCCCEEEEeC--CCcEEEEc-C
Q 017371 78 VNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDS------QTLVGLTSTKEGHLIICDN--ANGLHKVS-E 145 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~------~p~~gl~~d~dG~l~v~~~--~~gv~~~~-~ 145 (372)
...|++|+++++|.+|+++ .++.|.++| ++++........ .|. ++++ .+++|||++. ...|.++| .
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~-~i~~-~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE-QMVQ-YGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC-CEEE-ETTEEEEEECTTCCEEEEEETT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc-eEEE-ECCEEEEEcCCCCCEEEEEECC
Confidence 3689999998889999999 789999999 566654444445 788 9999 5789999985 45799999 5
Q ss_pred CC-c-EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC--ccCc
Q 017371 146 DG-V-ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFA 221 (372)
Q Consensus 146 ~g-~-~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--~~~~ 221 (372)
++ + ..+.. + ..|++++++++|++|+++... +.. .......+.|+++|++++++...... ...|
T Consensus 161 t~~~~~~i~~---g---~~p~~i~~~~dG~l~v~~~~~-~~~------~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p 227 (328)
T 3dsm_A 161 TDKVVDELTI---G---IQPTSLVMDKYNKMWTITDGG-YEG------SPYGYEAPSLYRIDAETFTVEKQFKFKLGDWP 227 (328)
T ss_dssp TTEEEEEEEC---S---SCBCCCEECTTSEEEEEBCCB-CTT------CSSCBCCCEEEEEETTTTEEEEEEECCTTCCC
T ss_pred CCeEEEEEEc---C---CCccceEEcCCCCEEEEECCC-ccC------CccccCCceEEEEECCCCeEEEEEecCCCCCc
Confidence 66 3 22211 1 357899999999999986531 000 00001147899999998887643321 3479
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHH
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIK 300 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r 300 (372)
+++++++|++.+|+++. .|++++.++.+... ..+.......|+++++|+ +|++||++...
T Consensus 228 ~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~~~~--------------- 288 (328)
T 3dsm_A 228 SEVQLNGTRDTLYWINN---DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVADAID--------------- 288 (328)
T ss_dssp EEEEECTTSCEEEEESS---SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEECTT---------------
T ss_pred eeEEEecCCCEEEEEcc---EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEcccc---------------
Confidence 99999999999999976 79999987654322 122221134699999998 78999999210
Q ss_pred HHHHhcCccccccccCCCceEEEEECCCCcEEEEEEC
Q 017371 301 HVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVD 337 (372)
Q Consensus 301 ~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~ 337 (372)
....+.|.+|+++|+++..+..
T Consensus 289 ---------------y~~~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 289 ---------------YQQQGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp ---------------SSSEEEEEEECTTCCEEEEEEE
T ss_pred ---------------cccCCEEEEECCCCCEEEEEEe
Confidence 0115789999999999998865
No 29
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.80 E-value=1.3e-17 Score=157.99 Aligned_cols=201 Identities=11% Similarity=0.123 Sum_probs=152.9
Q ss_pred CCCCccEEEc-CCCcEEEEe-cCCeEEEEe-CCc-eEEEE-ecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCCC--c
Q 017371 78 VNHPEDASMD-KNGVIYTAT-RDGWIKRLQ-DGT-WVNWK-FIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--V 148 (372)
Q Consensus 78 ~~~p~~i~~d-~~G~l~v~~-~~g~i~~~~-~g~-~~~~~-~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~g--~ 148 (372)
+..|.++++| .++.||+++ .+++|++++ +|. .+.+. .....|. ||++|+ .|+||+++.. ..|.+++.+| .
T Consensus 115 ~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~~~~I~~~~~dg~~~ 193 (386)
T 3v65_B 115 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 193 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETTTTEEEECBTTSCSC
T ss_pred CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCCCCeEEEEeCCCCce
Confidence 6789999999 478999999 688999999 554 44443 3445788 999995 6789999976 4577777666 4
Q ss_pred EEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEE
Q 017371 149 ENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVAL 226 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~ 226 (372)
+.+.. ..+..|++|++|+ +|.||++|.. ..++|++++++....+.+. .++..|+|+++
T Consensus 194 ~~l~~----~~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~PnGlav 253 (386)
T 3v65_B 194 KVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWPNGLTI 253 (386)
T ss_dssp EEEEC----SSCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred EEeec----CCCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCeeeEEE
Confidence 44432 1245789999996 6789999863 2478999999855544443 57888999999
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhc
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAY 306 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~ 306 (372)
+++++.|||+++..++|++++++|.. ...+.....+.|++|+++ ++++|++++.
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~---------------------- 307 (386)
T 3v65_B 254 DYAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWH---------------------- 307 (386)
T ss_dssp EGGGTEEEEEETTTTEEEEECTTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETT----------------------
T ss_pred eCCCCEEEEEECCCCEEEEEeCCCCe---eEEEEECCCCCceEEEEE-CCEEEEeeCC----------------------
Confidence 99888999999999999999998742 223333334579999995 5689999987
Q ss_pred CccccccccCCCceEEEEEC-CCCcEEEEEEC
Q 017371 307 PKLFSQFITLGGGAHLIHVA-EDGTIIRNLVD 337 (372)
Q Consensus 307 p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~ 337 (372)
.+.|.+++ .+|+....+..
T Consensus 308 ------------~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 308 ------------TKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp ------------TTEEEEEETTTCCSCEEEEC
T ss_pred ------------CCeEEEEECCCCcceEEEcc
Confidence 56899998 67877776654
No 30
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.80 E-value=4.5e-17 Score=150.08 Aligned_cols=220 Identities=10% Similarity=0.115 Sum_probs=162.5
Q ss_pred cEEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCCC------cEEEeeecCCccc
Q 017371 91 VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG------VENFLSYVNGSKL 160 (372)
Q Consensus 91 ~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~g------~~~l~~~~~~~~~ 160 (372)
.|++++. ..|.+++ .++...+......|. |+++|+ +++||+++.. ..|++++.+| .+.+.. ..+
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~-g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~----~~~ 76 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDI 76 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----SSC
T ss_pred EEEEECC-CeEEEEECCCcceEehhcCCCceE-EEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----CCC
Confidence 4667764 3599999 445556666678899 999996 5689999876 5688888332 232221 123
Q ss_pred ccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCCEEEEEeC
Q 017371 161 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCES 238 (372)
Q Consensus 161 ~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~~l~v~~~ 238 (372)
..|.+|++|. +|+||++|. ..++|.++|+++...+.+. ..+..|++++++|+++.+||++.
T Consensus 77 ~~p~glavd~~~~~ly~~d~-----------------~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~ 139 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDS-----------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDW 139 (316)
T ss_dssp SCCCEEEEETTTTEEEEEET-----------------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEEC
T ss_pred CCcCEEEEeecCCeEEEEEC-----------------CCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEcc
Confidence 5788999995 679999986 4678999999865555554 46789999999998889999998
Q ss_pred CC-CeEEEEEccCCCCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccC
Q 017371 239 WK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 316 (372)
Q Consensus 239 ~~-~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 316 (372)
+. .+|++++++|.. .+.+.......|.+|++|+ +++||+++..
T Consensus 140 ~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~~-------------------------------- 184 (316)
T 1ijq_A 140 GTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK-------------------------------- 184 (316)
T ss_dssp SSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETT--------------------------------
T ss_pred CCCCeEEEEcCCCCC---eEEEEECCCCCceEEEEeccCCEEEEEECC--------------------------------
Confidence 76 799999998742 2233322335799999996 5689999976
Q ss_pred CCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 317 GGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 317 ~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|.+++.+|+..+.+....+. +..+.++..++++||+....++.|.+++.
T Consensus 185 --~~~I~~~d~dg~~~~~~~~~~~~-~~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 185 --LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp --TTEEEEEETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred --CCeEEEEecCCCceEEEeecCCc-cCCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 46899999888665555432221 44577888888999999999999999874
No 31
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.79 E-value=2.4e-17 Score=151.92 Aligned_cols=182 Identities=13% Similarity=0.089 Sum_probs=136.7
Q ss_pred CCCCccEEEcC-CCcEEEEe-cCCeEEEEe-CC-----ceEEEEe-cCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCC
Q 017371 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-----TWVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSED 146 (372)
Q Consensus 78 ~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~g-----~~~~~~~-~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~ 146 (372)
+..|+++++|+ ++.||+++ .+++|++++ ++ ..+.+.. ....|. ||++|. +|+||+++.. ..|.+++.+
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC-EEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 67899999996 67999999 678999999 54 2333332 346788 999995 6789999876 568888866
Q ss_pred C--cEEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcc
Q 017371 147 G--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFAN 222 (372)
Q Consensus 147 g--~~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~ 222 (372)
| .+.+... .+..|++|++|+ +|+||++|.. ..++|++++++....+.+. ..+..|+
T Consensus 108 g~~~~~~~~~----~~~~P~~iavdp~~g~ly~~d~~----------------~~~~I~~~~~dG~~~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 108 GVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 167 (316)
T ss_dssp SSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCceEEEEEC----CCCCcceEEeCCCCCEEEEEccC----------------CCCeEEEEcCCCCCeEEEEECCCCCce
Confidence 6 4444321 235789999997 6799999863 2478999998754444443 5688999
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC--CCCCCceeEEcCCCCEEEEEec
Q 017371 223 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 223 gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwva~~~ 284 (372)
|++++++++.|||+++..++|.+++++|.. .+.+... ....|++|++|. |++|++++.
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~---~~~~~~~~~~~~~P~giav~~-~~ly~~d~~ 227 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFE-DKVFWTDII 227 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEET-TEEEEEETT
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCCc---eEEEeecCCccCCcEEEEEEC-CEEEEEECC
Confidence 999999999999999999999999998743 2333322 234699999985 889999987
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.79 E-value=2.1e-17 Score=147.61 Aligned_cols=184 Identities=17% Similarity=0.224 Sum_probs=136.1
Q ss_pred CCCCCCccEEEcCCCcEEEEecCCeEEEEe-CCc-eEEEEe-cCCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC-cEE
Q 017371 76 GSVNHPEDASMDKNGVIYTATRDGWIKRLQ-DGT-WVNWKF-IDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VEN 150 (372)
Q Consensus 76 g~~~~p~~i~~d~~G~l~v~~~~g~i~~~~-~g~-~~~~~~-~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g-~~~ 150 (372)
..+..|++|+++++|+||+++.+++|++++ ++. ...+.. ....|. +++++++|+||+++.. .+|.+++... ...
T Consensus 64 ~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 64 NGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPE-GLAVDTQGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp CSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEE-EEEECTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred CCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCc-ceEECCCCCEEEEECCCCEEEEEECCCceeE
Confidence 335689999999999999999888999999 554 333322 225688 9999999999999865 4688887333 222
Q ss_pred EeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE-eCCccCcceEEEecC
Q 017371 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVALSRD 229 (372)
Q Consensus 151 l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~-~~~~~~~~gi~~~~d 229 (372)
... ...+..|++|+++++|++|+++. ..++|+++|++++..... ...+..|.+++++++
T Consensus 143 ~~~---~~~~~~p~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~ 202 (270)
T 1rwi_B 143 VLP---FTGLNDPDGVAVDNSGNVYVTDT-----------------DNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEA 202 (270)
T ss_dssp ECC---CCSCCSCCCEEECTTCCEEEEEG-----------------GGTEEEEECTTTCCEEECCCSSCCSEEEEEECTT
T ss_pred eec---cccCCCceeEEEeCCCCEEEEEC-----------------CCCEEEEEecCCCceEeecccCCCCceEEEECCC
Confidence 211 11235788999999999999875 357899999986655433 234577899999999
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
| .+|+++..+++|.+++.++.... .........|.++++|++|++|+++..
T Consensus 203 g-~l~v~~~~~~~v~~~~~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 203 G-TVYVTEHNTNQVVKLLAGSTTST---VLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp C-CEEEEETTTSCEEEECTTCSCCE---ECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred C-CEEEEECCCCcEEEEcCCCCcce---eeccCCCCCceeEEECCCCCEEEEECC
Confidence 9 49999998889999998764221 111111235899999999999999987
No 33
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.79 E-value=7.1e-17 Score=144.73 Aligned_cols=218 Identities=11% Similarity=0.136 Sum_probs=158.6
Q ss_pred cEEEEecCCeEEEEe-CCce-------EEEEecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCCC--cEEEeeecCCc
Q 017371 91 VIYTATRDGWIKRLQ-DGTW-------VNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGS 158 (372)
Q Consensus 91 ~l~v~~~~g~i~~~~-~g~~-------~~~~~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~g--~~~l~~~~~~~ 158 (372)
.||+++. +.|++++ ++.. ..+..+..+|. ++++|+ +++||+++.. ..|.+++.+| ...+.. .
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~-gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~ 76 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVII-GLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR----Q 76 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEE-EEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC----T
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEE-EEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE----C
Confidence 5788774 4799998 5532 12333345788 999997 4689999976 4588888555 443321 1
Q ss_pred ccccccceEEccC-CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCCEEEEE
Q 017371 159 KLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVC 236 (372)
Q Consensus 159 ~~~~~~~l~~d~d-G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~~l~v~ 236 (372)
.+..|++|++|++ |+||++|. ..++|.+++.++...+.+. .++..|++++++++++.+||+
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~-----------------~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDS-----------------QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWT 139 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred CCCCccEEEEEecCCeEEEEEC-----------------CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEE
Confidence 2357889999985 79999986 4578999998754444443 456789999999988889999
Q ss_pred eCC--CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCC-CCEEEEEecCchhHHHHhhcchhHHHHHHhcCcccccc
Q 017371 237 ESW--KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQF 313 (372)
Q Consensus 237 ~~~--~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~ 313 (372)
+.. .++|+++++++... +.+.......|.++++|++ ++||+++..
T Consensus 140 ~~~~~~~~I~~~~~dg~~~---~~~~~~~~~~P~gia~d~~~~~lyv~d~~----------------------------- 187 (267)
T 1npe_A 140 DWNRDNPKIETSHMDGTNR---RILAQDNLGLPNGLTFDAFSSQLCWVDAG----------------------------- 187 (267)
T ss_dssp ECCSSSCEEEEEETTSCCC---EEEECTTCSCEEEEEEETTTTEEEEEETT-----------------------------
T ss_pred ECCCCCcEEEEEecCCCCc---EEEEECCCCCCcEEEEcCCCCEEEEEECC-----------------------------
Confidence 987 57999999987432 2222222346999999996 579999987
Q ss_pred ccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeCC
Q 017371 314 ITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 314 ~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~~ 372 (372)
.+.|.+++.+|.....+.. + ...+.++..++++||+++..++.|.+++.+
T Consensus 188 -----~~~I~~~~~~g~~~~~~~~--~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 188 -----THRAECLNPAQPGRRKVLE--G--LQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp -----TTEEEEEETTEEEEEEEEE--C--CCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred -----CCEEEEEecCCCceEEEec--C--CCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 5689999988765544432 1 234567777889999999999999999863
No 34
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.79 E-value=2e-17 Score=152.46 Aligned_cols=201 Identities=15% Similarity=0.164 Sum_probs=150.3
Q ss_pred CCCCccEEEcC-CCcEEEEe-cCCeEEEEe-CCc---eEEEEecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCCC--
Q 017371 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT---WVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG-- 147 (372)
Q Consensus 78 ~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~g~---~~~~~~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~g-- 147 (372)
+..|..+++|+ +|.||+++ .+++|++++ +|. ...+......|. |+++|. .|+||+++.. ..|.+++.+|
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc-EEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 45677888885 68999999 678999999 553 223344556889 999995 7799999876 4678888666
Q ss_pred cEEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE-eCCccCcceEE
Q 017371 148 VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFANGVA 225 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~-~~~~~~~~gi~ 225 (372)
.+.+.. ..+..|++|++|+ .|.||++|.. ..++|++++++....+.+ ..++..|||++
T Consensus 113 ~~~l~~----~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~l~~Pngla 172 (318)
T 3sov_A 113 RKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLT 172 (318)
T ss_dssp CEEEEC----SSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEEEe----CCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCCCeEEEEECCCCCccEEE
Confidence 454432 2245789999997 5899999853 357899999885444444 36788999999
Q ss_pred EecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHh
Q 017371 226 LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAA 305 (372)
Q Consensus 226 ~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~ 305 (372)
++++++.|||+++..++|++++++|.. .+.+.....+.|+++++|.+ ++|++++.
T Consensus 173 vd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~glav~~~-~lywtd~~--------------------- 227 (318)
T 3sov_A 173 LDYEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFED-ILYWTDWS--------------------- 227 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSCCSCEEEEEEETT-EEEEEETT---------------------
T ss_pred EeccCCEEEEEECCCCEEEEEcCCCCc---eEEEecCCCCCceEEEEeCC-EEEEEecC---------------------
Confidence 999988999999999999999998742 23344333457999999854 67777876
Q ss_pred cCccccccccCCCceEEEEECC-CCcEEEEEEC
Q 017371 306 YPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVD 337 (372)
Q Consensus 306 ~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~ 337 (372)
.+.|.++++ +|+....+..
T Consensus 228 -------------~~~V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 228 -------------THSILACNKYTGEGLREIHS 247 (318)
T ss_dssp -------------TTEEEEEETTTCCSCEEEEC
T ss_pred -------------CCeEEEEECCCCCceEEEeC
Confidence 568888887 5776555543
No 35
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.78 E-value=5.4e-17 Score=154.38 Aligned_cols=225 Identities=9% Similarity=0.109 Sum_probs=166.8
Q ss_pred EEcCCCcEEEEecCCeEEEEe-C-CceEEEEecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCCC------cEEEeee
Q 017371 85 SMDKNGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG------VENFLSY 154 (372)
Q Consensus 85 ~~d~~G~l~v~~~~g~i~~~~-~-g~~~~~~~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~g------~~~l~~~ 154 (372)
+.++...|++++ ...|.+++ + .....+......|. +|++|+ ++.||++|.. ..|++++.+| .+.+..
T Consensus 79 ~~~~~~~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~-~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~- 155 (400)
T 3p5b_L 79 AVGSIAYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS- 155 (400)
T ss_dssp CSTTSCEEEEEE-TTEEEEECTTSCSCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-
T ss_pred eccccceeEEec-cceeEEEccCCcceeEeccccCcce-EEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-
Confidence 344455677776 45799999 4 44666666678899 999995 6789999876 4588887433 222221
Q ss_pred cCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCCE
Q 017371 155 VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDY 232 (372)
Q Consensus 155 ~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~~ 232 (372)
..+..|.+|++|. .++||++|. ..++|.+++++++..+.+. ..+..|++++++|.++.
T Consensus 156 ---~~~~~p~glavD~~~~~lY~~d~-----------------~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ 215 (400)
T 3p5b_L 156 ---RDIQAPDGLAVDWIHSNIYWTDS-----------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGF 215 (400)
T ss_dssp ---SSCSCEEEEEEETTTTEEEEEET-----------------TTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTE
T ss_pred ---CCCCCcccEEEEecCCceEEEEC-----------------CCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCe
Confidence 2245788999997 789999987 4678999999866555544 57888999999998889
Q ss_pred EEEEeCCC-CeEEEEEccCCCCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccc
Q 017371 233 VVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 310 (372)
Q Consensus 233 l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~ 310 (372)
|||++.+. .+|++++++|... ..+.......|.+|++|+ +++||+++..
T Consensus 216 ly~td~~~~~~I~~~~~dG~~~---~~~~~~~l~~P~glavd~~~~~lY~aD~~-------------------------- 266 (400)
T 3p5b_L 216 MYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLLSGRLYWVDSK-------------------------- 266 (400)
T ss_dssp EEEEECSSSCCEEEEETTSCSC---EEEECSSCSCEEEEEEETTTTEEEEEETT--------------------------
T ss_pred EEEEeCCCCCEEEEEeCCCCcc---EEEEECCCCceEEEEEEeCCCEEEEEECC--------------------------
Confidence 99999864 7999999987532 223323334699999995 5689999976
Q ss_pred cccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEe
Q 017371 311 SQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 311 ~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~ 370 (372)
...|.+++.+|...+.+....+. +..+.++..++++||+.+..++.|.+++
T Consensus 267 --------~~~I~~~d~dG~~~~~~~~~~~~-l~~P~gl~v~~~~lywtd~~~~~V~~~~ 317 (400)
T 3p5b_L 267 --------LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSAN 317 (400)
T ss_dssp --------TTEEEEEETTSCCCEEEEECSST-TSSEEEEEEETTEEEEEESSSCSEEEEE
T ss_pred --------CCEEEEEeCCCCccEEEEeCCCC-CCCCEEEEEeCCEEEEecCCCCeEEEEE
Confidence 46899999888765555432222 4567788888999999999999999986
No 36
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.77 E-value=1.6e-17 Score=153.72 Aligned_cols=192 Identities=11% Similarity=0.135 Sum_probs=135.5
Q ss_pred EecCCCCCCCccEEEcCCCcEEEEe-cCCeEEEEe-CCc---eEEEEe---------cCCCcccCeEEcC-CCCEEEEeC
Q 017371 72 KVGEGSVNHPEDASMDKNGVIYTAT-RDGWIKRLQ-DGT---WVNWKF---------IDSQTLVGLTSTK-EGHLIICDN 136 (372)
Q Consensus 72 ~~~~g~~~~p~~i~~d~~G~l~v~~-~~g~i~~~~-~g~---~~~~~~---------~~~~p~~gl~~d~-dG~l~v~~~ 136 (372)
....+.+..|.+|++|++|+||+++ .+++|.+++ +|+ +..+.. ....|. ++++++ +|+|||++.
T Consensus 84 ~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~-~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 84 SSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT-DVAVEPSTGAVFVSDG 162 (329)
T ss_dssp EECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE-EEEECTTTCCEEEEEC
T ss_pred ccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc-EEEEeCCCCeEEEEeC
Confidence 3444667799999999999999999 678999999 665 333321 123688 999998 899999995
Q ss_pred --CCcEEEEcCCC--cEEEeeecCC-----cccccccceEEccC-CcEEEEeCCCCCCCcccccccccccCCCeEEEEeC
Q 017371 137 --ANGLHKVSEDG--VENFLSYVNG-----SKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 206 (372)
Q Consensus 137 --~~gv~~~~~~g--~~~l~~~~~~-----~~~~~~~~l~~d~d-G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 206 (372)
...|.+++.+| ...+.....+ ..+..|++|+++++ |+||++|. .+++|.+||+
T Consensus 163 ~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~-----------------~~~~I~~~~~ 225 (329)
T 3fvz_A 163 YCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR-----------------ENGRIQCFKT 225 (329)
T ss_dssp SSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET-----------------TTTEEEEEET
T ss_pred CCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-----------------CCCEEEEEEC
Confidence 46788899777 4444322111 24567999999998 89999986 4679999999
Q ss_pred CCCeEEEEeCC---ccCcceEEEec------CCCEEEEEeCCCCeEEEEEccCCCCcceeeec--cCCCCCCceeEEcCC
Q 017371 207 SSNITTLVADG---FYFANGVALSR------DEDYVVVCESWKFRCRKYWLKGERKGKLETFA--ENLPGAPDNINLAPD 275 (372)
Q Consensus 207 ~t~~~~~~~~~---~~~~~gi~~~~------dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~--~~~~g~p~~i~~d~~ 275 (372)
++|+....... ...+.+++++| +|+ +|+++....+|..++....+. ...+. ......|.++++|++
T Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~d 302 (329)
T 3fvz_A 226 DTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASED 302 (329)
T ss_dssp TTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTT
T ss_pred CCCcEEEEEeccccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCC
Confidence 86765544321 12233444554 665 677777777899998754321 12221 122346999999999
Q ss_pred CCEEEEEec
Q 017371 276 GTFWIAIIK 284 (372)
Q Consensus 276 G~lwva~~~ 284 (372)
|++||++..
T Consensus 303 G~lyvad~~ 311 (329)
T 3fvz_A 303 GTVYIGDAH 311 (329)
T ss_dssp SEEEEEESS
T ss_pred CCEEEEECC
Confidence 999999987
No 37
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.76 E-value=2.2e-16 Score=161.43 Aligned_cols=228 Identities=9% Similarity=0.099 Sum_probs=169.3
Q ss_pred ccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcC-CCCEEEEeCCC-cEEEEcCCC------cEEE
Q 017371 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK-EGHLIICDNAN-GLHKVSEDG------VENF 151 (372)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~-dG~l~v~~~~~-gv~~~~~~g------~~~l 151 (372)
...+++....|++++. ..|.+++ .+....+......+. +|+++. +++||+++... .|++++.+| .+.+
T Consensus 388 ~C~~~~~~p~Ll~an~-~~Ir~i~l~~~~~~~l~~~~~~~~-gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v 465 (791)
T 3m0c_C 388 ACKAVGSIAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV 465 (791)
T ss_dssp CCEETTSCCEEEEECB-SSEEEECTTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEE
T ss_pred eeeecccccccccccc-cceeEeeccCCcceeeecCCCceE-EEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE
Confidence 3455565667777764 3588888 445666666777889 999996 67899999874 477777433 2222
Q ss_pred eeecCCcccccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecC
Q 017371 152 LSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRD 229 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~d 229 (372)
. ...+..|.+|++|..+ +||++|. ..++|.+++.++...+++. ..+..|++|++++.
T Consensus 466 i----~~~l~~P~GLAvD~~~~~LY~tD~-----------------~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~ 524 (791)
T 3m0c_C 466 I----SRDIQAPDGLAVDWIHSNIYWTDS-----------------VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPV 524 (791)
T ss_dssp E----CSSCSCCCEEEEETTTTEEEEEET-----------------TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETT
T ss_pred E----ecCCCCcceeeeeecCCcEEEEec-----------------CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecC
Confidence 2 2234678999999755 8999987 4678999999866555554 57888999999999
Q ss_pred CCEEEEEeCCC-CeEEEEEccCCCCcceeeeccCCCCCCceeEEc-CCCCEEEEEecCchhHHHHhhcchhHHHHHHhcC
Q 017371 230 EDYVVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLA-PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 307 (372)
Q Consensus 230 g~~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d-~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p 307 (372)
++.|||++++. .+|++++++|.. ...+.......|.+|++| .+|+||+++..
T Consensus 525 ~g~LYwtD~g~~~~I~~~~~dG~~---~~~lv~~~l~~P~GLavD~~~~~LYwaD~~----------------------- 578 (791)
T 3m0c_C 525 HGFMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSK----------------------- 578 (791)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETT-----------------------
T ss_pred CCCEEEecCCCCCeEEEEecCCCc---eEEEEeCCCCCceEEEEecCCCeEEEEeCC-----------------------
Confidence 88999999876 899999998752 223333333469999999 56789999976
Q ss_pred ccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEe
Q 017371 308 KLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 308 ~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~ 370 (372)
...|.+++.+|.....+....+. +..+.++...+++||+.+..++.|.+++
T Consensus 579 -----------~~~I~~~d~dG~~~~~v~~~~~~-l~~P~glav~~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 579 -----------LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp -----------TTEEEEEETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -----------CCcEEEEecCCCceEEEecCCCc-cCCCCEEEEeCCEEEEEECCCCEEEEEe
Confidence 46899999988766655433232 4566778888899999999999999986
No 38
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.75 E-value=1.9e-16 Score=150.55 Aligned_cols=182 Identities=13% Similarity=0.099 Sum_probs=136.3
Q ss_pred CCCCccEEEcC-CCcEEEEe-cCCeEEEEe-CC-----ceEEEEe-cCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCC
Q 017371 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-----TWVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSED 146 (372)
Q Consensus 78 ~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~g-----~~~~~~~-~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~ 146 (372)
+..|.+|++|+ ++.||+++ .+++|++++ +| ..+.+.. ....|. ||++|. .++||+++.. ..|.+++.+
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc-cEEEEecCCceEEEECCCCeEEEEeCC
Confidence 67899999995 78999999 678999998 54 2333333 556789 999996 7899999976 457788866
Q ss_pred C--cEEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE-eCCccCcc
Q 017371 147 G--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGFYFAN 222 (372)
Q Consensus 147 g--~~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~-~~~~~~~~ 222 (372)
| .+.+... .+..|++|++|+ +|.||++|.. ..++|++++.++...+.+ ..++..|+
T Consensus 190 g~~~~~l~~~----~~~~P~~iavdp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~~~~~~l~~P~ 249 (400)
T 3p5b_L 190 GVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 249 (400)
T ss_dssp TCSEEEEEEC----SSCCEEEEEEETTTTEEEEEECS----------------SSCCEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCceEEEEeC----CCCCcceEEEecccCeEEEEeCC----------------CCCEEEEEeCCCCccEEEEECCCCceE
Confidence 6 4444331 245689999997 6799999863 346899999985554444 45688999
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC--CCCCCceeEEcCCCCEEEEEec
Q 017371 223 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 223 gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwva~~~ 284 (372)
|++++++++.|||+++..++|++++++|... ..+... ....|.+++++. +++|++++.
T Consensus 250 glavd~~~~~lY~aD~~~~~I~~~d~dG~~~---~~~~~~~~~l~~P~gl~v~~-~~lywtd~~ 309 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAVFE-DKVFWTDII 309 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCCC---EEEEECSSTTSSEEEEEEET-TEEEEEESS
T ss_pred EEEEEeCCCEEEEEECCCCEEEEEeCCCCcc---EEEEeCCCCCCCCEEEEEeC-CEEEEecCC
Confidence 9999999999999999999999999987532 223222 234689999965 468888876
No 39
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.75 E-value=4.1e-16 Score=143.62 Aligned_cols=220 Identities=10% Similarity=0.049 Sum_probs=162.1
Q ss_pred CCcEEEEecCCeEEEEe-CCc---eEEEEecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCCC--c-EEEeeecCCcc
Q 017371 89 NGVIYTATRDGWIKRLQ-DGT---WVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--V-ENFLSYVNGSK 159 (372)
Q Consensus 89 ~G~l~v~~~~g~i~~~~-~g~---~~~~~~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~g--~-~~l~~~~~~~~ 159 (372)
+..|++++ ...|.+++ ++. ..........+. ++.+++ +|+||++|.. ..|++++.+| . +.+... .
T Consensus 4 ~p~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~-~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~----~ 77 (318)
T 3sov_A 4 APLLLYAN-RRDLRLVDATNGKENATIVVGGLEDAA-AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS----G 77 (318)
T ss_dssp CCEEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEE-EEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE----C
T ss_pred ccEEEEEc-cCeEEEEECCCCceEEEEEecCCCccE-EEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC----C
Confidence 44677776 35699998 543 333334445677 899985 5899999976 4588888544 2 222221 2
Q ss_pred cccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCCEEEEEe
Q 017371 160 LRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCE 237 (372)
Q Consensus 160 ~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~~l~v~~ 237 (372)
+..|.++++|. +|+||++|. ..++|.++++++...+.+. ..+..|++++++++++.+||++
T Consensus 78 l~~p~glavd~~~g~ly~~d~-----------------~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td 140 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDS-----------------ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTD 140 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEET-----------------TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEE
T ss_pred CCCccEEEEEcCCCeEEEEEC-----------------CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEe
Confidence 35788999995 789999986 4578999999865555554 6788999999999888899999
Q ss_pred CC-CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCcccccccc
Q 017371 238 SW-KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFIT 315 (372)
Q Consensus 238 ~~-~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~ 315 (372)
.+ ..+|++++++|.. ...+....-..|++|++|+ +|+||+++..
T Consensus 141 ~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pnglavd~~~~~lY~aD~~------------------------------- 186 (318)
T 3sov_A 141 WGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADAK------------------------------- 186 (318)
T ss_dssp CSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETT-------------------------------
T ss_pred cCCCCEEEEEEcCCCC---eEEEEECCCCCccEEEEeccCCEEEEEECC-------------------------------
Confidence 75 6899999998743 2223322234699999997 6789999987
Q ss_pred CCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 316 LGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 316 ~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|.+++.+|+..+.+.... +..+.++..+++.||.....++.|.+++.
T Consensus 187 ---~~~I~~~d~dG~~~~~~~~~~---~~~P~glav~~~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 187 ---LNFIHKSNLDGTNRQAVVKGS---LPHPFALTLFEDILYWTDWSTHSILACNK 236 (318)
T ss_dssp ---TTEEEEEETTSCSCEEEECSC---CSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ---CCEEEEEcCCCCceEEEecCC---CCCceEEEEeCCEEEEEecCCCeEEEEEC
Confidence 568999998886655554321 44677888888999999999999999875
No 40
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.75 E-value=2.8e-16 Score=157.43 Aligned_cols=185 Identities=14% Similarity=0.086 Sum_probs=145.8
Q ss_pred cCCCCCCCccEEEcC-CCcEEEEe-cCCeEEEEe-CC-ceEEEEe-cCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCC
Q 017371 74 GEGSVNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-TWVNWKF-IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSED 146 (372)
Q Consensus 74 ~~g~~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~g-~~~~~~~-~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~ 146 (372)
+.+.+..|.+|++|+ +|.||+++ .+++|++++ +| ..+.+.. ....|. ||++|. .|+||+++.. ..|.+++.+
T Consensus 32 ~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~-GlAvD~~~~~LY~tD~~~~~I~v~~~d 110 (628)
T 4a0p_A 32 PLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE-GMAVDWLGKNLYWADTGTNRIEVSKLD 110 (628)
T ss_dssp CCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc-eEEEEeCCCEEEEEECCCCEEEEEecC
Confidence 333467899999995 78999999 689999999 55 4455444 335799 999995 5789999986 457777766
Q ss_pred C--cEEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcce
Q 017371 147 G--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANG 223 (372)
Q Consensus 147 g--~~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~g 223 (372)
| .+.+.. ..+..|++|++|+ +|.||++|.+ ..++|+++++++...+.+.+++..|+|
T Consensus 111 G~~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~P~G 170 (628)
T 4a0p_A 111 GQHRQVLVW----KDLDSPRALALDPAEGFMYWTEWG----------------GKPKIDRAAMDGSERTTLVPNVGRANG 170 (628)
T ss_dssp STTCEEEEC----SSCCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSCSSEEE
T ss_pred CCcEEEEEe----CCCCCcccEEEccCCCeEEEeCCC----------------CCCEEEEEeCCCCceEEEECCCCCcce
Confidence 6 455542 2245789999997 7899999863 367999999987777788889999999
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 224 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 224 i~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
++++++++.|||++...++|++++++|... +.+...+ ..|.+++++. +++|++++.
T Consensus 171 lalD~~~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~l-~~P~glav~~-~~ly~tD~~ 226 (628)
T 4a0p_A 171 LTIDYAKRRLYWTDLDTNLIESSNMLGLNR---EVIADDL-PHPFGLTQYQ-DYIYWTDWS 226 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEEECC-SCEEEEEEET-TEEEEEETT
T ss_pred EEEccccCEEEEEECCCCEEEEEcCCCCce---EEeeccC-CCceEEEEEC-CEEEEecCC
Confidence 999999999999999999999999988533 3444333 3699999997 789999976
No 41
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.75 E-value=6.7e-17 Score=145.94 Aligned_cols=183 Identities=14% Similarity=0.252 Sum_probs=134.7
Q ss_pred CCCCCccEEE-cCCCcEEEEec--CCeEEEEe-CCceE-EEEe-cCCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC--
Q 017371 77 SVNHPEDASM-DKNGVIYTATR--DGWIKRLQ-DGTWV-NWKF-IDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-- 147 (372)
Q Consensus 77 ~~~~p~~i~~-d~~G~l~v~~~--~g~i~~~~-~g~~~-~~~~-~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g-- 147 (372)
.+..|.++++ +++|+||+++. +++|.+++ +|+.. .+.. ....|. +++++++|++||++.. ..|.+++.+|
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 153 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPR-GVTVDNKGRIIVVECKVMRVIIFDQNGNV 153 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEE-EEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCce-EEEEeCCCCEEEEECCCCEEEEEcCCCCE
Confidence 3567999999 58999999983 78999999 66543 3322 234688 9999999999999865 5688998666
Q ss_pred cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC--ccCcceEE
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVA 225 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--~~~~~gi~ 225 (372)
...+... ..+..|++|+++++|++|+++. ..++|+++|+++.....+... +..|.+++
T Consensus 154 ~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~-----------------~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~ 213 (286)
T 1q7f_A 154 LHKFGCS---KHLEFPNGVVVNDKQEIFISDN-----------------RAHCVKVFNYEGQYLRQIGGEGITNYPIGVG 213 (286)
T ss_dssp EEEEECT---TTCSSEEEEEECSSSEEEEEEG-----------------GGTEEEEEETTCCEEEEESCTTTSCSEEEEE
T ss_pred EEEeCCC---CccCCcEEEEECCCCCEEEEEC-----------------CCCEEEEEcCCCCEEEEEccCCccCCCcEEE
Confidence 3333211 2235688999999999999875 367899999875444444322 46799999
Q ss_pred EecCCCEEEEEeCCCC-eEEEEEccCCCCcceeeeccC-CCCCCceeEEcCCCCEEEEEec
Q 017371 226 LSRDEDYVVVCESWKF-RCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 226 ~~~dg~~l~v~~~~~~-~i~~~~~~g~~~~~~~~~~~~-~~g~p~~i~~d~~G~lwva~~~ 284 (372)
++++|+ +|+++..++ +|.+|+.++... ..+... ....|.+++++++|++||++..
T Consensus 214 ~d~~G~-l~v~~~~~~~~i~~~~~~g~~~---~~~~~~~~~~~~~~i~~~~~g~l~vs~~~ 270 (286)
T 1q7f_A 214 INSNGE-ILIADNHNNFNLTIFTQDGQLI---SALESKVKHAQCFDVALMDDGSVVLASKD 270 (286)
T ss_dssp ECTTCC-EEEEECSSSCEEEEECTTSCEE---EEEEESSCCSCEEEEEEETTTEEEEEETT
T ss_pred ECCCCC-EEEEeCCCCEEEEEECCCCCEE---EEEcccCCCCcceeEEECCCCcEEEECCC
Confidence 999996 999998876 999999765422 222222 1224789999999999999643
No 42
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.74 E-value=2.9e-15 Score=138.51 Aligned_cols=236 Identities=13% Similarity=0.121 Sum_probs=165.0
Q ss_pred CCCccEEEcCCC-cEEEEec-------CCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCC-CcEEEEc-C
Q 017371 79 NHPEDASMDKNG-VIYTATR-------DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-E 145 (372)
Q Consensus 79 ~~p~~i~~d~~G-~l~v~~~-------~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~-~gv~~~~-~ 145 (372)
.+|.+++++++| .+|+++. ++.|+.++ +++..........|. +++++++|+ +|+++.. ..+..+| .
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPF-GATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCC-SEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcc-eEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 378899999987 6888873 56899999 566544444556788 999999997 8888765 4588888 5
Q ss_pred CC--cEEEeeecCC----cccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC-C
Q 017371 146 DG--VENFLSYVNG----SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-G 217 (372)
Q Consensus 146 ~g--~~~l~~~~~~----~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~-~ 217 (372)
++ ...+...... .....+.+++++++|+ +|+++.. ..+.|+.+|.++++...... .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------~~~~i~~~d~~~~~~~~~~~~~ 183 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----------------KESVIWVVDGGNIKLKTAIQNT 183 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------------SSCEEEEEETTTTEEEEEECCC
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC----------------CCceEEEEcCCCCceEEEecCC
Confidence 66 3333221110 0112367899999986 7887532 35789999999888776655 4
Q ss_pred ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc-CCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhc
Q 017371 218 FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNS 295 (372)
Q Consensus 218 ~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~-~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~ 295 (372)
...+.++++++||+.+|+++. ++.|+.+++.+.+......... .....+.+++++++|+ +|+++..
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------- 251 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK----------- 251 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----------
T ss_pred CCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----------
Confidence 455899999999999999876 6789999986543221111111 1233567799999997 8888765
Q ss_pred chhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE--CCEEEEEeCCCCeEEEEeCC
Q 017371 296 SKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 296 ~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~~ 372 (372)
.+.|..+|. +++.+..+..+.+ ..+... +++||+++...+.|.+++++
T Consensus 252 -----------------------~~~v~~~d~~~~~~~~~~~~~~~------~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 252 -----------------------AAEVLVVDTRNGNILAKVAAPES------LAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp -----------------------SSEEEEEETTTCCEEEEEECSSC------CCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred -----------------------CCEEEEEECCCCcEEEEEEcCCC------ceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 467888885 5788777765432 234444 45799999989999998863
No 43
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.74 E-value=3.8e-16 Score=161.32 Aligned_cols=226 Identities=14% Similarity=0.178 Sum_probs=162.5
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEec---------CCCcccCeEEcCCCC-EEEEeCCCcEEEEc-CCC
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI---------DSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG 147 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~---------~~~p~~gl~~d~dG~-l~v~~~~~gv~~~~-~~g 147 (372)
..+|+.|++|.||+|+.++.|.+++ .++++.+... ..... +++.|++|+ ||++....||++++ .++
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK-AVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE-EEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE-EEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 4578899999999999887899999 5666665421 13345 888999999 99998778999999 556
Q ss_pred -cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-----c--c
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-----F--Y 219 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~-----~--~ 219 (372)
.+.+....+......+..+..|++|+||++. .++|+++|+++++++.+... + .
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGNLWLGT-------------------LSALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-------------------SSCEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-------------------cCceeEEeCCCCeEEEccccccccccCCc
Confidence 6555432111223456789999999999973 24699999998887765422 1 1
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc--CCCC----CCceeEEcCCCCEEEEEecCchhHHHHh
Q 017371 220 FANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE--NLPG----APDNINLAPDGTFWIAIIKLDARRMKIL 293 (372)
Q Consensus 220 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~--~~~g----~p~~i~~d~~G~lwva~~~~~~~~~~~~ 293 (372)
....+..+++|+ +|++.. ..|++++.++.+. .+.. ...+ ....|..|++|+||+++..
T Consensus 499 ~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~----~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~--------- 562 (795)
T 4a2l_A 499 QITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI----QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE--------- 562 (795)
T ss_dssp CEEEEEECTTCC-EEEEES--SCEEEEEEETTEE----EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS---------
T ss_pred eEEEEEECCCCC-EEEEeC--CceEEEeCCCCeE----EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC---------
Confidence 234566777786 888875 5699998865432 1211 1112 2345888999999999875
Q ss_pred hcchhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 294 NSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 294 ~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
++++++++.+.+..+...+|...+.+.++.++ +|+||+++ .+.|.+++.
T Consensus 563 ---------------------------Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~ 612 (795)
T 4a2l_A 563 ---------------------------GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNP 612 (795)
T ss_dssp ---------------------------CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEET
T ss_pred ---------------------------CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcC
Confidence 68999988777777776666655567888887 69999999 467777764
No 44
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.71 E-value=6.7e-15 Score=135.99 Aligned_cols=257 Identities=15% Similarity=0.213 Sum_probs=166.8
Q ss_pred cCceEecCCCCCCCccEEEcCCCcEEEEec-CCeEEEEe--CCceEEEE-------ecCCCcccCeEEcCC----CCEEE
Q 017371 68 QDFIKVGEGSVNHPEDASMDKNGVIYTATR-DGWIKRLQ--DGTWVNWK-------FIDSQTLVGLTSTKE----GHLII 133 (372)
Q Consensus 68 ~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~-~g~i~~~~--~g~~~~~~-------~~~~~p~~gl~~d~d----G~l~v 133 (372)
..++++.+| +..|++|++.++|.||++.. .|+|++++ +|+.+.+. ...+.++ ||+++|+ |.||+
T Consensus 22 ~~~~~va~g-L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll-Gia~~Pdf~~~g~lYv 99 (347)
T 3das_A 22 KVLRTVATG-LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLL-GIALSPDYASDHMVYA 99 (347)
T ss_dssp EEEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE-EEEECTTHHHHCEEEE
T ss_pred ceeEEeecC-CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCce-eeEeccccccCCEEEE
Confidence 367778877 89999999999999999996 89999998 45554432 1234677 9999984 88999
Q ss_pred EeC---CCcEEEEc-CC-----C----cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCe
Q 017371 134 CDN---ANGLHKVS-ED-----G----VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQ 200 (372)
Q Consensus 134 ~~~---~~gv~~~~-~~-----g----~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~ 200 (372)
+.. ...|.++. .. . .+.+....+....+....|++++||+|||+....-. .. .........|.
T Consensus 100 ~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~--~~--~~qd~~~~~G~ 175 (347)
T 3das_A 100 YFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGD--TG--LSQDRKSLGGK 175 (347)
T ss_dssp EEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTC--GG--GTTCTTCSTTC
T ss_pred EEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCC--Cc--cccCCCCCCCE
Confidence 742 34688887 32 1 344544444445577888999999999998532100 00 00001234689
Q ss_pred EEEEeCCCC--------eEEEEeCCccCcceEEEecCCCEEEEEeCCCC---eEEEEEccCCCCccee------------
Q 017371 201 LLKYDPSSN--------ITTLVADGFYFANGVALSRDEDYVVVCESWKF---RCRKYWLKGERKGKLE------------ 257 (372)
Q Consensus 201 v~~~d~~t~--------~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~---~i~~~~~~g~~~~~~~------------ 257 (372)
|+|+++++. ..+++..++.+|+|++++++|+ ||+++.+.+ .|.++. .|...+-..
T Consensus 176 IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~-~G~nyGwP~~~g~~~~~~~~~ 253 (347)
T 3das_A 176 ILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIK-PGDNYGWPEAEGKGGGSGFHD 253 (347)
T ss_dssp EEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEEC-TTCBCCTTTCCSSCCCTTCCC
T ss_pred EEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEc-CCCEecCCcccCCCCCccccC
Confidence 999999854 3567888999999999999876 999998653 455553 232211100
Q ss_pred eeccCCC--CCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEEC--CCC---c
Q 017371 258 TFAENLP--GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA--EDG---T 330 (372)
Q Consensus 258 ~~~~~~~--g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~--~~g---~ 330 (372)
....-.+ .-|.|+++. +|.+|++... ...|.++. .++ +
T Consensus 254 P~~~~~~~~~ap~G~~~~-~g~~~~~~l~----------------------------------~~~l~~v~~~~~~~~~~ 298 (347)
T 3das_A 254 PVAQWSTDEASPSGIAYA-EGSVWMAGLR----------------------------------GERLWRIPLKGTAAAAD 298 (347)
T ss_dssp CSEEECTTTCCEEEEEEE-TTEEEEEEST----------------------------------TCSEEEEEEETTEESSC
T ss_pred CcEecCCCCCCCcceEEE-cCceeecccc----------------------------------CCEEEEEEecCCceecc
Confidence 0000011 246788887 5899999876 23454443 222 1
Q ss_pred EEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCC----------eEEEEeC
Q 017371 331 IIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSN----------FIGKVQL 371 (372)
Q Consensus 331 ~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~----------~i~~~~~ 371 (372)
....+.+. ...+..+... +|.||+++.+.+ +|.|+.+
T Consensus 299 ~e~~l~~~----~gR~~dv~~~pDG~lyv~td~~~g~g~p~~~ddri~r~~~ 346 (347)
T 3das_A 299 PQAFLEGE----YGRLRTVAPAGGDKLWLVTSNTDGRGDAKGGDDRILELEV 346 (347)
T ss_dssp CEEESTTT----SSCEEEEEEEETTEEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred eEEeecCC----CCCccEEEECCCCcEEEEEcCCCCCCCCCCCCCEEEEEeC
Confidence 12222222 2246777776 799999987544 6887765
No 45
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=2.3e-15 Score=139.21 Aligned_cols=232 Identities=7% Similarity=-0.034 Sum_probs=160.4
Q ss_pred CCccEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEe-CCCcEEEEc-CCC-cE-EEe
Q 017371 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICD-NANGLHKVS-EDG-VE-NFL 152 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~-~~~gv~~~~-~~g-~~-~l~ 152 (372)
.|++++++ ++.+|+++ .++.|..+| +++..........|. +++++++|+|||++ ....|.++| .++ +. .+.
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~-~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR-YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE-EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc-EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 57889886 57899998 578899999 566533234567899 99998889999998 456799999 556 33 232
Q ss_pred eecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCE
Q 017371 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDY 232 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~ 232 (372)
..........|.+|++ .++++|+++.+ ..+.|.++|++++++.........|+++++++||+
T Consensus 123 ~g~~~~~~~~p~~i~~-~~~~lyv~~~~----------------~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~- 184 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ-YGKYVYVNCWS----------------YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK- 184 (328)
T ss_dssp CTTCCTTTCBCCCEEE-ETTEEEEEECT----------------TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE-
T ss_pred cCCccccCCCcceEEE-ECCEEEEEcCC----------------CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC-
Confidence 2111112236889999 67899998641 25689999999888766555556799999999997
Q ss_pred EEEEeCCC----------CeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCC-CEEEEEecCchhHHHHhhcchhHHH
Q 017371 233 VVVCESWK----------FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKH 301 (372)
Q Consensus 233 l~v~~~~~----------~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~ 301 (372)
+|++..+. +.|++++..+.+... .+.-.....|.+++++++| .+|+++.
T Consensus 185 l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~--~~~~~~g~~p~~la~~~d~~~lyv~~~------------------ 244 (328)
T 3dsm_A 185 MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEK--QFKFKLGDWPSEVQLNGTRDTLYWINN------------------ 244 (328)
T ss_dssp EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEE--EEECCTTCCCEEEEECTTSCEEEEESS------------------
T ss_pred EEEEECCCccCCccccCCceEEEEECCCCeEEE--EEecCCCCCceeEEEecCCCEEEEEcc------------------
Confidence 88887765 789999986543221 2211112269999999976 5777653
Q ss_pred HHHhcCccccccccCCCceEEEEECCC-CcEEEEEECCCCCeeccceeeEEE--CCEEEEEe----CCCCeEEEEeCC
Q 017371 302 VLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVIS----LTSNFIGKVQLS 372 (372)
Q Consensus 302 ~~~~~p~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs----~~~~~i~~~~~~ 372 (372)
.|+.+|.+ +++...-..+.+ ...+.++..+ +++||+++ ..++.|.+++.+
T Consensus 245 -------------------~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 -------------------DIWRMPVEADRVPVRPFLEFR--DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -------------------SEEEEETTCSSCCSSCSBCCC--SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred -------------------EEEEEECCCCceeeeeeecCC--CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 36778864 444210001111 2356777775 58999999 778899998753
No 46
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.70 E-value=2.3e-15 Score=136.62 Aligned_cols=187 Identities=13% Similarity=0.130 Sum_probs=128.8
Q ss_pred CCCCccEEEcC-CCcEEEEe-cCCeEEEEe-C-CceEEEEecC----C----CcccCeEE---cCCCCEEEE-eC-----
Q 017371 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-D-GTWVNWKFID----S----QTLVGLTS---TKEGHLIIC-DN----- 136 (372)
Q Consensus 78 ~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~-g~~~~~~~~~----~----~p~~gl~~---d~dG~l~v~-~~----- 136 (372)
-.-||++..|+ +|.+|+++ .+|+|.+++ + +..+.+.... + .+. ||.+ |++|+|||+ +.
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~s-Gl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMS-GLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEE-EEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceee-EEEEeccCCCCcEEEEEccccccc
Confidence 45799999985 78999999 799999999 4 5555542221 1 356 9999 799999995 42
Q ss_pred --------CCcEEEEc-C---CC-cEEEee--ecC-------CcccccccceEEccCCcEEEEeCCCCCCCccccccccc
Q 017371 137 --------ANGLHKVS-E---DG-VENFLS--YVN-------GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 194 (372)
Q Consensus 137 --------~~gv~~~~-~---~g-~~~l~~--~~~-------~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~ 194 (372)
...|+++| . +| ...... ... +.....+++|++|++|++||+++.
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-------------- 156 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-------------- 156 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE--------------
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC--------------
Confidence 35699999 5 46 333322 111 113346899999999999999762
Q ss_pred ccCCCeEEEEeCCCCeEEEEe------CCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc--C---C
Q 017371 195 GKPHGQLLKYDPSSNITTLVA------DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE--N---L 263 (372)
Q Consensus 195 ~~~~g~v~~~d~~t~~~~~~~------~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~--~---~ 263 (372)
+-+.|+|++++......+. .....+|||+++|||+.|++.++ .++|++|++..+... +.-.. . .
T Consensus 157 --~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~--~v~~~~~G~~~~ 231 (334)
T 2p9w_A 157 --GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAW--PEPVKINGDFGT 231 (334)
T ss_dssp --SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCC--CEECEESSCCCC
T ss_pred --CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcce--eecccccCCccc
Confidence 2178999999855454432 12334789999999999999998 889999998743210 11111 1 1
Q ss_pred CCCCcee-EEcCCCCE-EEEEec
Q 017371 264 PGAPDNI-NLAPDGTF-WIAIIK 284 (372)
Q Consensus 264 ~g~p~~i-~~d~~G~l-wva~~~ 284 (372)
...|++| ....+|++ +|+...
T Consensus 232 ~~~~dgilp~~~~G~vllV~~~~ 254 (334)
T 2p9w_A 232 LSGTEKIVTVPVGNESVLVGARA 254 (334)
T ss_dssp CTTEEEEEEEEETTEEEEEEEET
T ss_pred ccCcccccccccCCEEEEEEcCC
Confidence 2248895 66778987 777765
No 47
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.70 E-value=7.2e-16 Score=154.27 Aligned_cols=182 Identities=16% Similarity=0.159 Sum_probs=134.6
Q ss_pred CCCCccEEEcC-CCcEEEEe-cCCeEEEEe-CCc--eEEEE-ecCCCcccCeEEcC-CCCEEEEeCCC-cEEEEcCCC--
Q 017371 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DGT--WVNWK-FIDSQTLVGLTSTK-EGHLIICDNAN-GLHKVSEDG-- 147 (372)
Q Consensus 78 ~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~g~--~~~~~-~~~~~p~~gl~~d~-dG~l~v~~~~~-gv~~~~~~g-- 147 (372)
+..|..|+++. +|.||+++ .+++|++++ +|. .+.+. .....|. ||++|. .++||+++... .|.+++.+|
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~-GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC-eEEEEecCCEEEEEeCCCCEEEEEECCCCC
Confidence 67899999995 77999999 688999999 654 23333 3346899 999997 56899999774 477777677
Q ss_pred cEEEeeecCCcccccccceEEccC-CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEE
Q 017371 148 VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVA 225 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~d-G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~ 225 (372)
.+.+.. ..+..|++|++|+. |.||+||.. ..++|++.+++....+.+. ..+..|+|++
T Consensus 118 ~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~~P~Gla 177 (619)
T 3s94_A 118 RKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLT 177 (619)
T ss_dssp CEEEEC----SSCSCCCCEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSSEEEEE
T ss_pred EEEEEe----CCCCCCceEEEecCCCeEEEeccC----------------CCCEEEEEECCCCceEEEEeCCCCCCcEEE
Confidence 455542 23467999999985 899999863 3578999998855454444 5788999999
Q ss_pred EecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 226 LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 226 ~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
++++++.|||+++..++|++++++|.. .+.+.......|.+|+++++ ++|++++.
T Consensus 178 ld~~~~~LY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gi~~~~~-~ly~td~~ 232 (619)
T 3s94_A 178 LDYEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFED-ILYWTDWS 232 (619)
T ss_dssp EETTTTEEEEEETTTCCEEEESSSCCE---EC---------CCCEEESSS-EEEEECTT
T ss_pred EEccCCEEEEEeCCCCeEEEecCCCCc---cEEEEeCCCCCceEEEEeCC-EEEEecCC
Confidence 999988999999999999999998742 22233222346999999987 89999876
No 48
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.70 E-value=3.3e-15 Score=142.50 Aligned_cols=183 Identities=15% Similarity=0.187 Sum_probs=129.4
Q ss_pred CCCCccEEEcCCC-cEEEEecCC--eEEEEe-CC-c-eEEE----EecCCCcccCeEEcC-CCCEEEEeCCCcEEEEc-C
Q 017371 78 VNHPEDASMDKNG-VIYTATRDG--WIKRLQ-DG-T-WVNW----KFIDSQTLVGLTSTK-EGHLIICDNANGLHKVS-E 145 (372)
Q Consensus 78 ~~~p~~i~~d~~G-~l~v~~~~g--~i~~~~-~g-~-~~~~----~~~~~~p~~gl~~d~-dG~l~v~~~~~gv~~~~-~ 145 (372)
...|+ ++++++| .||+++.++ +|++++ .+ . ...+ ......|. ++++++ +|+||+++....+++++ .
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~-~iav~p~~g~lyv~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIG-AVALDETEEWLYFVDSNKNFGRFNVK 248 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCC-BCEECTTSSEEEEECTTCEEEEEETT
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcE-EEEEeCCCCeEEEEECCCcEEEEECC
Confidence 35677 9999988 588888544 899999 33 2 2333 11456788 999999 78999987655699999 4
Q ss_pred CC-cEEEee-ecCCccccccc-ceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC-C---
Q 017371 146 DG-VENFLS-YVNGSKLRFAN-DVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-G--- 217 (372)
Q Consensus 146 ~g-~~~l~~-~~~~~~~~~~~-~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~-~--- 217 (372)
++ ...+.. ...+.....|. +|++++ +|+||++|. ..++|++++++ ++...+.. .
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~-----------------~~~~I~~~~~~-g~~~~~~g~~~~~ 310 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ-----------------NLSSVYKITPD-GECEWFCGSATQK 310 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEET-----------------TTTEEEEECTT-CCEEEEEECTTCC
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeC-----------------CCCEEEEEecC-CCEEEEEeCCCCC
Confidence 44 444321 11121112234 999999 689999986 46789999987 44544432 2
Q ss_pred -----------ccCcceEEEecCCCEEEEEeC-CCCeEEEEEccCCCCcceeeeccC--------------CCCCCceeE
Q 017371 218 -----------FYFANGVALSRDEDYVVVCES-WKFRCRKYWLKGERKGKLETFAEN--------------LPGAPDNIN 271 (372)
Q Consensus 218 -----------~~~~~gi~~~~dg~~l~v~~~-~~~~i~~~~~~g~~~~~~~~~~~~--------------~~g~p~~i~ 271 (372)
+..|+|++++++|+ +|++++ .+++|.++++.+.. ...+... ....|.+++
T Consensus 311 g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~---v~~~~g~~~~~g~~~g~~~~~~~~~P~gia 386 (409)
T 3hrp_A 311 TVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGY---VSTVAGQVDVASQIDGTPLEATFNYPYDIC 386 (409)
T ss_dssp SCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTE---EEEEEECTTCBSCCCBSTTTCCBSSEEEEE
T ss_pred CcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCE---EEEEeCCCCCCCcCCCChhceEeCCceEEE
Confidence 56799999999998 999999 99999999954322 2222111 013599999
Q ss_pred EcCCCCEEEEEec
Q 017371 272 LAPDGTFWIAIIK 284 (372)
Q Consensus 272 ~d~~G~lwva~~~ 284 (372)
+|++|+|||++..
T Consensus 387 vd~~g~lyVad~~ 399 (409)
T 3hrp_A 387 YDGEGGYWIAEAW 399 (409)
T ss_dssp ECSSSEEEEEEST
T ss_pred EcCCCCEEEEECC
Confidence 9999999999987
No 49
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.70 E-value=7e-16 Score=142.15 Aligned_cols=177 Identities=15% Similarity=0.105 Sum_probs=127.7
Q ss_pred CCCccEEEcC-CCcEEEEecCCeEEEEe-C-CceEEEEe-----cCCCcccCeEEcC-CCCEEEEeCC------------
Q 017371 79 NHPEDASMDK-NGVIYTATRDGWIKRLQ-D-GTWVNWKF-----IDSQTLVGLTSTK-EGHLIICDNA------------ 137 (372)
Q Consensus 79 ~~p~~i~~d~-~G~l~v~~~~g~i~~~~-~-g~~~~~~~-----~~~~p~~gl~~d~-dG~l~v~~~~------------ 137 (372)
..|.+|++++ +|+||+++..++|++++ + ++++.+.. ....|. ++++|+ +|+|||++..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~-~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLY-AVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEE-EEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccc-eEEEecCCCEEEEECCcccccccccceeh
Confidence 3689999996 89999999777799999 4 55555532 224678 999999 9999999854
Q ss_pred ------CcEEEEcC-CC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCC
Q 017371 138 ------NGLHKVSE-DG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 208 (372)
Q Consensus 138 ------~gv~~~~~-~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t 208 (372)
.++++++. ++ .+.+... +..|++|+++++|+ ||++|. ..++|++|+.++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~-----~~~p~gia~~~dg~~lyv~d~-----------------~~~~I~~~~~~~ 216 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKE-----LHVPGGAEVSADSSFVLVAEF-----------------LSHQIVKYWLEG 216 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEE-----ESCCCEEEECTTSSEEEEEEG-----------------GGTEEEEEESSS
T ss_pred cccCCCceEEEEeCCCCEEEEeccC-----CccCcceEECCCCCEEEEEeC-----------------CCCeEEEEECCC
Confidence 34888984 45 5544332 35789999999986 999876 357899999864
Q ss_pred ---CeEEEEeCCccCcceEEEecCCCEEEEEeCC----------CCeEEEEEccCCCCcceeeeccC--C-CCCCceeEE
Q 017371 209 ---NITTLVADGFYFANGVALSRDEDYVVVCESW----------KFRCRKYWLKGERKGKLETFAEN--L-PGAPDNINL 272 (372)
Q Consensus 209 ---~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~----------~~~i~~~~~~g~~~~~~~~~~~~--~-~g~p~~i~~ 272 (372)
++.+.+.. +..|+|++++++|+ +|+++.. ..+|.+|+.+|... ..+... . ...|.+++.
T Consensus 217 ~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~---~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 217 PKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNIL---EVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp TTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEE---EEEECCTTTTTSCCCEEEE
T ss_pred CcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCEE---EEEECCCCCccccceEEEE
Confidence 34454443 22399999999997 9999865 46799998866422 222211 1 234677766
Q ss_pred cCCCCEEEEEec
Q 017371 273 APDGTFWIAIIK 284 (372)
Q Consensus 273 d~~G~lwva~~~ 284 (372)
.+|+|||++..
T Consensus 292 -~~g~L~v~~~~ 302 (322)
T 2fp8_A 292 -HDGLLYIGTLF 302 (322)
T ss_dssp -ETTEEEEECSS
T ss_pred -eCCEEEEeecC
Confidence 47899999876
No 50
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=2.5e-15 Score=154.95 Aligned_cols=230 Identities=12% Similarity=0.118 Sum_probs=157.9
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEec----------CCCcccCeEEcCCCCEEEEeCCCcEEEEcC-CC
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI----------DSQTLVGLTSTKEGHLIICDNANGLHKVSE-DG 147 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~----------~~~p~~gl~~d~dG~l~v~~~~~gv~~~~~-~g 147 (372)
..+|+.|++|.||+|+.++.|.+++ .+.++.+... ..... +++.|++|+||++....||.+++. ++
T Consensus 315 v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~~ 393 (781)
T 3v9f_A 315 ARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS-SVCDDGQGKLWIGTDGGGINVFENGKR 393 (781)
T ss_dssp EEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE-EEEECTTSCEEEEEBSSCEEEEETTEE
T ss_pred EEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE-EEEEcCCCCEEEEeCCCcEEEEECCCC
Confidence 4568999999999999777899998 4556555321 12345 889999999999987789999994 33
Q ss_pred -cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-c--cCcce
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-F--YFANG 223 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~-~--~~~~g 223 (372)
.+.+... .+.....+..|+.|++|+||++.. .++|+++|+++++++.+... + .....
T Consensus 394 ~~~~~~~~-~~~~~~~v~~i~~d~~g~lWigt~------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~ 454 (781)
T 3v9f_A 394 VAIYNKEN-RELLSNSVLCSLKDSEGNLWFGTY------------------LGNISYYNTRLKKFQIIELEKNELLDVRV 454 (781)
T ss_dssp EEECC------CCCSBEEEEEECTTSCEEEEET------------------TEEEEEECSSSCEEEECCSTTTCCCCEEE
T ss_pred eEEEccCC-CCCCCcceEEEEECCCCCEEEEec------------------cCCEEEEcCCCCcEEEeccCCCCCCeEEE
Confidence 3332111 122234567899999999999642 36899999988887765432 1 22334
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc-C-CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHH
Q 017371 224 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-N-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKH 301 (372)
Q Consensus 224 i~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~-~-~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~ 301 (372)
++.+++|+ +|++.. ..|++++..+.+......... . .......++.|++|+||+++..
T Consensus 455 i~~d~~g~-lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~----------------- 514 (781)
T 3v9f_A 455 FYEDKNKK-IWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG----------------- 514 (781)
T ss_dssp EEECTTSE-EEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESS-----------------
T ss_pred EEECCCCC-EEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcC-----------------
Confidence 55666664 888765 579999986543322111100 0 1134567889999999999974
Q ss_pred HHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeE-EEEe
Q 017371 302 VLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFI-GKVQ 370 (372)
Q Consensus 302 ~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i-~~~~ 370 (372)
+++++++++++.+..+....+...+.+.++.++ +|+||+|+. +.| .+++
T Consensus 515 ------------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~Glv~~~d 565 (781)
T 3v9f_A 515 ------------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--EGLVCFPS 565 (781)
T ss_dssp ------------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--TEEEEESC
T ss_pred ------------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--CCceEEEC
Confidence 368999998877777776666555677888887 699999997 445 5554
No 51
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=6.9e-16 Score=159.08 Aligned_cols=225 Identities=12% Similarity=0.088 Sum_probs=157.6
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe-C-CceEEEEe----cCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC-cEEEe
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ-D-GTWVNWKF----IDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFL 152 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~-~-g~~~~~~~----~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g-~~~l~ 152 (372)
..+|+.|++|.||+|+.++.|++++ . +.++.+.. ...... +++.|++|+||++....|+++++ .++ ++.+.
T Consensus 365 v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~ 443 (781)
T 3v9f_A 365 VSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVL-CSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIE 443 (781)
T ss_dssp EEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEE-EEEECTTSCEEEEETTEEEEEECSSSCEEEECC
T ss_pred eEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceE-EEEECCCCCEEEEeccCCEEEEcCCCCcEEEec
Confidence 5678899999999999777799999 3 33333211 123455 88899999999998767999999 456 55442
Q ss_pred eecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc------cCcceEEE
Q 017371 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF------YFANGVAL 226 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~------~~~~gi~~ 226 (372)
.. +.....+..|..|++|+||++. .++|+++|+++++++.+.... .....++.
T Consensus 444 ~~--~~~~~~v~~i~~d~~g~lwigt-------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 444 LE--KNELLDVRVFYEDKNKKIWIGT-------------------HAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp ST--TTCCCCEEEEEECTTSEEEEEE-------------------TTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred cC--CCCCCeEEEEEECCCCCEEEEE-------------------CCceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 21 2223456789999999999973 257999999887776654321 23456777
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCC----ceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHH
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAP----DNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHV 302 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p----~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~ 302 (372)
+++|+ +|++.. +..|++++.++. ....+.. ..+.| ..|..|++|+||+++..
T Consensus 503 d~~g~-lWigt~-~~Gl~~~~~~~~---~~~~~~~-~~~l~~~~i~~i~~d~~g~lWi~T~~------------------ 558 (781)
T 3v9f_A 503 DSEGR-FWIGTF-GGGVGIYTPDMQ---LVRKFNQ-YEGFCSNTINQIYRSSKGQMWLATGE------------------ 558 (781)
T ss_dssp CTTCC-EEEEES-SSCEEEECTTCC---EEEEECT-TTTCSCSCEEEEEECTTSCEEEEETT------------------
T ss_pred cCCCC-EEEEEc-CCCEEEEeCCCC---eEEEccC-CCCCCCCeeEEEEECCCCCEEEEECC------------------
Confidence 88886 888765 346999987543 2333321 22333 45888999999999975
Q ss_pred HHhcCccccccccCCCceEE-EEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 303 LAAYPKLFSQFITLGGGAHL-IHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 303 ~~~~p~~~~~~~~~~~~~~v-~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
++ .+++++...+..|...+|...+.+.++.++ +|+||+++. +.|.+++.
T Consensus 559 ------------------Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~--~Gl~~~~~ 609 (781)
T 3v9f_A 559 ------------------GLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWASTN--TGISCYIT 609 (781)
T ss_dssp ------------------EEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEECS--SCEEEEET
T ss_pred ------------------CceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEcC--CceEEEEC
Confidence 45 999987766677776667555567788887 699999994 45777764
No 52
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.69 E-value=5.2e-15 Score=151.33 Aligned_cols=182 Identities=13% Similarity=0.079 Sum_probs=135.3
Q ss_pred CCCCccEEEcC-CCcEEEEe-cCCeEEEEe-CC-----ceEEEEe-cCCCcccCeEEcCCC-CEEEEeCC-CcEEEEcCC
Q 017371 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-----TWVNWKF-IDSQTLVGLTSTKEG-HLIICDNA-NGLHKVSED 146 (372)
Q Consensus 78 ~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~g-----~~~~~~~-~~~~p~~gl~~d~dG-~l~v~~~~-~gv~~~~~~ 146 (372)
+..|.+|++|. ++.||+++ .+++|++++ +| ..+.+.. ....|. ||++|..+ +||+++.. +.|.+++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~-GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc-eeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 67899999996 78999999 678999998 54 2333333 567899 99999655 89999987 457777766
Q ss_pred C--cEEEeeecCCcccccccceEEccC-CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcc
Q 017371 147 G--VENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFAN 222 (372)
Q Consensus 147 g--~~~l~~~~~~~~~~~~~~l~~d~d-G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~ 222 (372)
| .+++... .+..|++|++|+. |+||++|.+ ..++|.+++.++...+.+. .++..|+
T Consensus 502 G~~~~~l~~~----~l~~P~gIaVDp~~g~LYwtD~g----------------~~~~I~~~~~dG~~~~~lv~~~l~~P~ 561 (791)
T 3m0c_C 502 GVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 561 (791)
T ss_dssp SSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCeEEEEEeC----CCCCcceEEEecCCCCEEEecCC----------------CCCeEEEEecCCCceEEEEeCCCCCce
Confidence 6 4444331 2356899999985 899999863 2378999999865555544 5678999
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC--CCCCCceeEEcCCCCEEEEEec
Q 017371 223 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 223 gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwva~~~ 284 (372)
||+++++++.|||++...++|++++++|.... .+... .-..|.+|+++. ++||++++.
T Consensus 562 GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~---~v~~~~~~l~~P~glav~~-~~lYwtD~~ 621 (791)
T 3m0c_C 562 GITLDLLSGRLYWVDSKLHSISSIDVNGGNRK---TILEDEKRLAHPFSLAVFE-DKVFWTDII 621 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEEECTTTTSSEEEEEEET-TEEEEEETT
T ss_pred EEEEecCCCeEEEEeCCCCcEEEEecCCCceE---EEecCCCccCCCCEEEEeC-CEEEEEECC
Confidence 99999988899999999999999999885322 22222 122477888864 489999987
No 53
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.69 E-value=5.9e-15 Score=147.66 Aligned_cols=182 Identities=16% Similarity=0.135 Sum_probs=139.3
Q ss_pred CCCCccEEEcC-CCcEEEEe-cCCeEEEEe-CC-ceEEEEe-cCCCcccCeEEcC-CCCEEEEeCCC-cEEEEcCCC--c
Q 017371 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-TWVNWKF-IDSQTLVGLTSTK-EGHLIICDNAN-GLHKVSEDG--V 148 (372)
Q Consensus 78 ~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~g-~~~~~~~-~~~~p~~gl~~d~-dG~l~v~~~~~-gv~~~~~~g--~ 148 (372)
+..|..|++|+ +|.||+++ ..++|++++ +| ..+.+.. ..+.|. ||++|. .++||+++... .|.+++.+| .
T Consensus 348 l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~-GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 348 IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPD-GIAVDWVARNLYWTDTGTDRIEVTRLNGTMR 426 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcC-ceEEecccCcEEEEeCCCCcEEEEeCCCCeE
Confidence 66788999996 78999999 688999999 65 3444443 346899 999995 67899999874 466666666 4
Q ss_pred EEEeeecCCcccccccceEEccC-CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEE
Q 017371 149 ENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVAL 226 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~d-G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~ 226 (372)
+.+.. ..+..|++|++|+. |.||++|.+ ..++|++.+.+....+.+. ..+..|+|+++
T Consensus 427 ~~l~~----~~l~~P~~iavdp~~G~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~l~~P~Glal 486 (619)
T 3s94_A 427 KILIS----EDLEEPRAIVLDPMVGYMYWTDWG----------------EIPKIERAALDGSDRVVLVNTSLGWPNGLAL 486 (619)
T ss_dssp EEEEC----TTCCSEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred EEEEE----CCCCCeeeEEEEcCCCcEEEecCC----------------CCCEEEEEccCCCccEEEEeCCCCCCeeeEE
Confidence 55542 23568999999985 999999864 3478999998754444444 46899999999
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++++.|||+++..++|++++++|... +.+.......|.+|+++.+ +||++++.
T Consensus 487 D~~~~~LY~aD~~~~~I~~~~~dG~~~---~~~~~~~l~~P~glav~~~-~ly~tD~~ 540 (619)
T 3s94_A 487 DYDEGKIYWGDAKTDKIEVMNTDGTGR---RVLVEDKIPHIFGFTLLGD-YVYWTDWQ 540 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCC---EEEEECCCCSSCCEEEETT-EEEEECTT
T ss_pred cccCCEEEEEECCCCEEEEEecCCCce---EEEeccCCCCcEEEEEECC-EEEEeecC
Confidence 998889999999999999999988532 2222233346999999866 89999987
No 54
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.69 E-value=2e-14 Score=133.21 Aligned_cols=239 Identities=12% Similarity=0.137 Sum_probs=155.3
Q ss_pred CCCCccEEEcCCCcEEEEec---CCeEEEEe--CCceEEEE---ecCCCcccCeEEcCCCC-EEEEeCC-CcEEEEc--C
Q 017371 78 VNHPEDASMDKNGVIYTATR---DGWIKRLQ--DGTWVNWK---FIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS--E 145 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~~---~g~i~~~~--~g~~~~~~---~~~~~p~~gl~~d~dG~-l~v~~~~-~gv~~~~--~ 145 (372)
...|..++++++|+||+++. ++.|+.|+ +++.+.+. .....|. ++++++||+ ||+++.. ..+..++ .
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~-~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA-YVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCS-EEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCE-EEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 36899999999999998874 57899988 66654433 3466788 999999997 7787744 3466666 4
Q ss_pred CC-cEEEeee-cCCc------ccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCC-CCeEEEEe-
Q 017371 146 DG-VENFLSY-VNGS------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVA- 215 (372)
Q Consensus 146 ~g-~~~l~~~-~~~~------~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-t~~~~~~~- 215 (372)
+| .+.+... ..+. ....+..+++++||++|+++. ..+.|+.|+.+ +++.....
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~-----------------~~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL-----------------GSDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET-----------------TTTEEEEEEECTTSCEEEEEE
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC-----------------CCCEEEEEEECCCCcEEEeee
Confidence 55 4443321 1111 112466799999999998865 34567777765 46554322
Q ss_pred ---CCccCcceEEEecCCCEEEEEeCCCCeEEEEEccC--CCCcceeeeccCCC------CCCceeEEcCCCC-EEEEEe
Q 017371 216 ---DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG--ERKGKLETFAENLP------GAPDNINLAPDGT-FWIAII 283 (372)
Q Consensus 216 ---~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~------g~p~~i~~d~~G~-lwva~~ 283 (372)
.....|++++++|||+++|+++...+.|..|+++. .+......+. ..+ ..|.++++++||+ +|++..
T Consensus 181 ~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 181 LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK-TIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE-SSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred EEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee-ecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 22336778999999999999998888888888764 2211111221 111 2367799999997 778876
Q ss_pred cCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCCCcE--EEEEECCCCCeeccceeeEEE-C-CEEEEE
Q 017371 284 KLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTI--IRNLVDPTGQLMSFVTSGLQV-D-NHLYVI 359 (372)
Q Consensus 284 ~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~--~~~~~~~~g~~~~~~t~~~~~-~-g~L~ig 359 (372)
.. ..-.++.++.+|+. +..+... +. .+..+... + ..||++
T Consensus 260 ~~--------------------------------~~v~v~~~~~~g~~~~~~~~~~~-~~---~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 260 GY--------------------------------NTLAVFAVTADGHLTLIQQISTE-GD---FPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp TT--------------------------------TEEEEEEECGGGCEEEEEEEECS-SS---CCCEEEECTTSSEEEEE
T ss_pred CC--------------------------------CEEEEEEECCCCcEEEeEEEecC-CC---CcCeEEECCCCCEEEEE
Confidence 41 01234444445543 3333322 21 35566665 3 579999
Q ss_pred eCCCCeEEEEeC
Q 017371 360 SLTSNFIGKVQL 371 (372)
Q Consensus 360 s~~~~~i~~~~~ 371 (372)
+...+.|.++++
T Consensus 304 ~~~~~~v~v~~~ 315 (347)
T 3hfq_A 304 NQNTDNATLYAR 315 (347)
T ss_dssp ETTTTEEEEEEE
T ss_pred EcCCCcEEEEEE
Confidence 998899988854
No 55
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.68 E-value=2.6e-15 Score=140.30 Aligned_cols=261 Identities=12% Similarity=0.111 Sum_probs=164.6
Q ss_pred CceEecCCCCCCCccEEEcCCCc-EEEEecCCeEEEEe-CCceEE-EE-------ecCCCcccCeEEcC----CCCEEEE
Q 017371 69 DFIKVGEGSVNHPEDASMDKNGV-IYTATRDGWIKRLQ-DGTWVN-WK-------FIDSQTLVGLTSTK----EGHLIIC 134 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~g~i~~~~-~g~~~~-~~-------~~~~~p~~gl~~d~----dG~l~v~ 134 (372)
.++++..+ +..|.+|+++++|+ ||+++..|+|++++ +|.... +. ...+.++ +|+++| +|.|||+
T Consensus 9 ~~~~va~~-l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 9 NVEVLQDK-LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLL-DVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp EEEEEEEE-ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEE-EEEECTTHHHHCEEEEE
T ss_pred EEEEEECC-CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCce-eEEECCCCCCCCEEEEE
Confidence 35556555 78999999999999 99999889999999 665431 11 1234567 999998 5899999
Q ss_pred eCC--------CcEEEEc-C-C-C----cEEEeeecCC--cccccccceEEccCCcEEEEeCCCCCCCcccccccccccC
Q 017371 135 DNA--------NGLHKVS-E-D-G----VENFLSYVNG--SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKP 197 (372)
Q Consensus 135 ~~~--------~gv~~~~-~-~-g----~~~l~~~~~~--~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~ 197 (372)
... ..|.+++ . + + .+.+....+. ...+.+++|++++||+||++...... .+... .....
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~--~~~~q--~~~~~ 162 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQ--RPTAQ--DLDKL 162 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTC--GGGGG--CTTSC
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCC--CCccC--CCCCC
Confidence 643 2577776 2 2 2 2333333332 23467889999999999999643110 00000 11234
Q ss_pred CCeEEEEeCCCC-------------eEEEEeCCccCcceEEEecCCCEEEEEeCCCC---eEEEEEccCCCCcc------
Q 017371 198 HGQLLKYDPSSN-------------ITTLVADGFYFANGVALSRDEDYVVVCESWKF---RCRKYWLKGERKGK------ 255 (372)
Q Consensus 198 ~g~v~~~d~~t~-------------~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~---~i~~~~~~g~~~~~------ 255 (372)
.|+|+|+|+++. ..+++..++..|.|++++++...||+++.+.+ +|.++.. |...+-
T Consensus 163 ~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~-G~nyGwp~~~~~ 241 (353)
T 2g8s_A 163 QGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQK-GKNYGWPLATWG 241 (353)
T ss_dssp TTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCT-TCBCCTTTBCSS
T ss_pred CeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEecc-CCcCCCCCccCC
Confidence 689999999843 45677788999999999996557999998643 4554432 111100
Q ss_pred ---------------eeeecc-----CCCCCCceeEEcC-------CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 256 ---------------LETFAE-----NLPGAPDNINLAP-------DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 256 ---------------~~~~~~-----~~~g~p~~i~~d~-------~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
...+.. .....|.++++.. +|++||++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~------------------------ 297 (353)
T 2g8s_A 242 INYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALK------------------------ 297 (353)
T ss_dssp BCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETT------------------------
T ss_pred CCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEcc------------------------
Confidence 000000 0011377888754 5889999876
Q ss_pred cccccccCCCceEEEEECCC-CcEEEEEECCCCCeeccceeeEEE-CCEEEEEeC-CCCeEEEEeC
Q 017371 309 LFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISL-TSNFIGKVQL 371 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~-~~~~i~~~~~ 371 (372)
.+.|.+++.+ ++......--.+ ....+..+.+. +|.||+.+. ....|.|+..
T Consensus 298 ----------~~~v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 298 ----------DKDVIVMSVNGDKVTEDGRILTD-RGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp ----------TTEEEEEEEETTEEEEEEEESGG-GCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred ----------CCEEEEEEeCCCeEeeeEEcccC-CCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 4567777644 343322111111 12246778876 689999865 5678888753
No 56
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.67 E-value=6.3e-16 Score=156.97 Aligned_cols=227 Identities=9% Similarity=0.095 Sum_probs=161.9
Q ss_pred EEEcCCCcEEEEecCCeEEEEe-C-CceEEEEecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCCC------cEEEee
Q 017371 84 ASMDKNGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG------VENFLS 153 (372)
Q Consensus 84 i~~d~~G~l~v~~~~g~i~~~~-~-g~~~~~~~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~g------~~~l~~ 153 (372)
.++++...|++++. +.|.+++ + ++...+......|. +|++++ ++.||+++.. ..|++++.++ ...+
T Consensus 372 ~~~~~~~~ll~~~~-~~I~~id~~~~~~~~~~~~~~~p~-gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~-- 447 (699)
T 1n7d_A 372 KAVGSIAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV-- 447 (699)
T ss_dssp BCCSSCCCBCCCCT-TC-CEECTTSCCEECCSCCCTTCC-CCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB--
T ss_pred cccccceeEEecCc-cceEEEeCCCCcceeeeccCcceE-EEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE--
Confidence 33445556777754 4688888 3 44555555567889 999996 5689999866 4688888332 1111
Q ss_pred ecCCcccccccceEEc-cCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCC
Q 017371 154 YVNGSKLRFANDVVEA-SDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDED 231 (372)
Q Consensus 154 ~~~~~~~~~~~~l~~d-~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~ 231 (372)
....+..|.+|++| ..|+||++|. ..++|++++++++..+.+. .++..|++++++++++
T Consensus 448 --i~~~~~~P~glavD~~~g~LY~tD~-----------------~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g 508 (699)
T 1n7d_A 448 --ISRDIQAPDGLAVDWIHSNIYWTDS-----------------VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHG 508 (699)
T ss_dssp --CCSCC--CCCEECCCSSSBCEECCT-----------------TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSS
T ss_pred --EeCCCCCcceEEEEeeCCcEEEEec-----------------cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCC
Confidence 11224568899999 5679999876 4578999999866655554 4578899999999888
Q ss_pred EEEEEeCCC-CeEEEEEccCCCCcceeeeccCCCCCCceeEEcCC-CCEEEEEecCchhHHHHhhcchhHHHHHHhcCcc
Q 017371 232 YVVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 309 (372)
Q Consensus 232 ~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~ 309 (372)
+|||++.+. .+|++++++|... ..+.......|.+|++|++ ++||+++..
T Consensus 509 ~ly~td~~~~~~I~~~~~dG~~~---~~l~~~~l~~PnGlavd~~~~~LY~aD~~------------------------- 560 (699)
T 1n7d_A 509 FMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLLSGRLYWVDSK------------------------- 560 (699)
T ss_dssp CCEECCCSSSCCEEBCCSSSCCC---CEESCSSCSSCCCEEECTTTCCEEEEETT-------------------------
T ss_pred cEEEcccCCCCeEEEEeCCCCCe---eEEEeCCCCCccEEEEeccCCEEEEEecC-------------------------
Confidence 899999875 7899999887432 2232222356999999975 689999976
Q ss_pred ccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 310 FSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 310 ~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|.+++.+|...+.+....+. +..+.++..++++||+....++.|.+++.
T Consensus 561 ---------~~~I~~~d~dG~~~~~~~~~~~~-~~~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 561 ---------LHSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp ---------TTEEEEECSSSSCCEEECCCSSS-CSSCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred ---------CCeEEEEccCCCceEEEEecCCc-CCCceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 46899999888665555432222 45677788888899999999999999874
No 57
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.66 E-value=1.1e-14 Score=150.44 Aligned_cols=223 Identities=14% Similarity=0.175 Sum_probs=155.0
Q ss_pred CccEEEcCCCc-EEEEecCCeEEEEe--CCceEEEEe-----cCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC-cEE
Q 017371 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKF-----IDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VEN 150 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~~~~-----~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g-~~~ 150 (372)
..+++.|++|. ||+|+.++.|++++ +++++.+.. ...... .+..|++|+||++.. .|+++++ .++ .+.
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVY-AILPDGEGNLWLGTL-SALVRFNPEQRSFTT 485 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEE-EEEECSSSCEEEEES-SCEEEEETTTTEEEE
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeE-EEEECCCCCEEEEec-CceeEEeCCCCeEEE
Confidence 45788899999 99999877899999 566766643 123456 889999999999986 7999999 555 554
Q ss_pred Eeeec--CCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC-----Ccc--Cc
Q 017371 151 FLSYV--NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-----GFY--FA 221 (372)
Q Consensus 151 l~~~~--~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~-----~~~--~~ 221 (372)
+.... .+.....+..+.+|++|+||++. . ++|+++|++++++ .+.. ++. ..
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt------------------~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i 545 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKRLWIGG------------------E-EGLSVFKQEGLDI-QKASILPVSNVTKLFT 545 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCCEEEEE------------------S-SCEEEEEEETTEE-EECCCSCSCGGGGSCE
T ss_pred ccccccccccCCceEEEEEECCCCCEEEEe------------------C-CceEEEeCCCCeE-EEecCCCCCCCCCCee
Confidence 43210 11122456789999999999973 2 5699999887776 3321 121 22
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCc----eeEEcCCCCEEEEEecCchhHHHHhhcch
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPD----NINLAPDGTFWIAIIKLDARRMKILNSSK 297 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~----~i~~d~~G~lwva~~~~~~~~~~~~~~~~ 297 (372)
..+..+++|+ +|++... +|++|+.++. ....+. ...|+|+ ++..|++|+||+++..
T Consensus 546 ~~i~~d~~g~-lWigT~~--Gl~~~d~~~~---~~~~~~-~~~gl~~~~i~~i~~d~~g~lWi~t~~------------- 605 (795)
T 4a2l_A 546 NCIYEASNGI-IWVGTRE--GFYCFNEKDK---QIKRYN-TTNGLPNNVVYGILEDSFGRLWLSTNR------------- 605 (795)
T ss_dssp EEEEECTTSC-EEEEESS--CEEEEETTTT---EEEEEC-GGGTCSCSCEEEEEECTTSCEEEEETT-------------
T ss_pred EEEEECCCCC-EEEEeCC--CceeECCCCC---cEEEeC-CCCCCchhheEEEEECCCCCEEEEcCC-------------
Confidence 3566677776 8887653 7999997543 233332 2223444 4888999999999965
Q ss_pred hHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccc--eeeEEE-CCEEEEEeCCCCeEEEEe
Q 017371 298 LIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFV--TSGLQV-DNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 298 ~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~--t~~~~~-~g~L~igs~~~~~i~~~~ 370 (372)
++.+++++...+..|...+|...+.+ .++..+ +|+||+|+.. .|.+++
T Consensus 606 -----------------------Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~--Gl~~~~ 656 (795)
T 4a2l_A 606 -----------------------GISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGIN--GITTFR 656 (795)
T ss_dssp -----------------------EEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETT--EEEEEC
T ss_pred -----------------------ceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCC--ceEEEc
Confidence 79999998888888877777543433 344444 6999999965 455554
No 58
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.66 E-value=3.5e-14 Score=142.25 Aligned_cols=218 Identities=11% Similarity=0.113 Sum_probs=161.2
Q ss_pred CCcEEEEecCCeEEEEe-CC-ceEEEEe--cCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCCC--cEEEeeecCCccc
Q 017371 89 NGVIYTATRDGWIKRLQ-DG-TWVNWKF--IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSEDG--VENFLSYVNGSKL 160 (372)
Q Consensus 89 ~G~l~v~~~~g~i~~~~-~g-~~~~~~~--~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~g--~~~l~~~~~~~~~ 160 (372)
+..|.++. .+.|.+++ ++ ....... ....|. +|++|+ +|+||++|.. ..|.+++.+| .+.+... .+
T Consensus 6 ~~~Ll~s~-~~~I~~i~l~~~~~~~~~~~~~~~~~~-~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~----g~ 79 (628)
T 4a0p_A 6 EAFLLFSR-RADIRRISLETNNNNVAIPLTGVKEAS-ALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF----GL 79 (628)
T ss_dssp CCEEEEEE-TTEEEEEESSCTTCEEECCCCSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS----SC
T ss_pred CcEEEEEe-CCcEEEEECCCCCcceEEEcCCCCceE-EEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC----CC
Confidence 44566664 56799998 44 3333222 234788 999996 6789999876 4588888555 5544321 23
Q ss_pred ccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCCEEEEEeC
Q 017371 161 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCES 238 (372)
Q Consensus 161 ~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~~l~v~~~ 238 (372)
..|.+||+|. .|+||++|. ..++|.+++++++..+.+. ..+..|++++++|.++.|||++.
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~-----------------~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~ 142 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADT-----------------GTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEW 142 (628)
T ss_dssp SCCCEEEEETTTTEEEEEET-----------------TTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEEC
T ss_pred CCcceEEEEeCCCEEEEEEC-----------------CCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCC
Confidence 5789999995 578999987 4678999998865555554 77889999999998778999997
Q ss_pred C-CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCC-CCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccC
Q 017371 239 W-KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 316 (372)
Q Consensus 239 ~-~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 316 (372)
+ ..+|++++++|.. .+.+.+. ...|.+|++|.+ ++||+++..
T Consensus 143 g~~~~I~r~~~dG~~---~~~l~~~-~~~P~GlalD~~~~~LY~aD~~-------------------------------- 186 (628)
T 4a0p_A 143 GGKPKIDRAAMDGSE---RTTLVPN-VGRANGLTIDYAKRRLYWTDLD-------------------------------- 186 (628)
T ss_dssp SSSCEEEEEETTSCS---CEEEECS-CSSEEEEEEETTTTEEEEEETT--------------------------------
T ss_pred CCCCEEEEEeCCCCc---eEEEECC-CCCcceEEEccccCEEEEEECC--------------------------------
Confidence 6 6899999998853 2233333 246999999985 689999987
Q ss_pred CCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 317 GGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 317 ~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|.+++.+|...+.+... +..+.++..++++||+++..++.|.+++.
T Consensus 187 --~~~I~~~d~dG~~~~v~~~~----l~~P~glav~~~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 187 --TNLIESSNMLGLNREVIADD----LPHPFGLTQYQDYIYWTDWSRRSIERANK 235 (628)
T ss_dssp --TTEEEEEETTSCSCEEEEEC----CSCEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred --CCEEEEEcCCCCceEEeecc----CCCceEEEEECCEEEEecCCCCEEEEEEC
Confidence 56899999887554444331 34567888888999999999999999873
No 59
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.66 E-value=6.5e-15 Score=141.35 Aligned_cols=182 Identities=13% Similarity=0.135 Sum_probs=127.9
Q ss_pred CCCCCccEEEcCCCcEEEEecC-----CeEEEEe-CCceE--EEEecCCCcccCeEEcC-CCCEEEEeCCC-cEEEEcC-
Q 017371 77 SVNHPEDASMDKNGVIYTATRD-----GWIKRLQ-DGTWV--NWKFIDSQTLVGLTSTK-EGHLIICDNAN-GLHKVSE- 145 (372)
Q Consensus 77 ~~~~p~~i~~d~~G~l~v~~~~-----g~i~~~~-~g~~~--~~~~~~~~p~~gl~~d~-dG~l~v~~~~~-gv~~~~~- 145 (372)
.+..|.+|++|++|.||+++.. ..++.++ ++.+. ........|. ++++++ +|+|||++... .|++++.
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~-giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAK-TCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBC-CCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCC-EEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 4678999999999999999853 2466666 33321 2223467899 999999 89999998764 5999995
Q ss_pred CC-c-EEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCC--CCeE---EEEeC-
Q 017371 146 DG-V-ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS--SNIT---TLVAD- 216 (372)
Q Consensus 146 ~g-~-~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~--t~~~---~~~~~- 216 (372)
+| . +.+... .. ...+.+|+++++|+ ||++|. ..++|++++.+ ++.+ ..++.
T Consensus 259 ~g~~~~~~~~~-~~--~~~~~~ia~dpdG~~LYvad~-----------------~~~~I~~~~~d~~~~~~~~~~~~ag~ 318 (433)
T 4hw6_A 259 TGTLTEEEVMM-DT--KGSNFHIVWHPTGDWAYIIYN-----------------GKHCIYRVDYNRETGKLAVPYIVCGQ 318 (433)
T ss_dssp TCCEEEEEEEC-SC--CSSCEEEEECTTSSEEEEEET-----------------TTTEEEEEEBCTTTCCBCCCEEEEEC
T ss_pred CCeEEEEEecc-CC--CCCcccEEEeCCCCEEEEEeC-----------------CCCEEEEEeCCCCCcccCcEEEEEec
Confidence 47 5 444322 11 12345799999997 999986 46789997754 3322 22221
Q ss_pred --------------CccCcceEEE---------ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeec-----------cC
Q 017371 217 --------------GFYFANGVAL---------SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA-----------EN 262 (372)
Q Consensus 217 --------------~~~~~~gi~~---------~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~-----------~~ 262 (372)
.+..|.++++ +.+| .|||+++.+++|.+++.+|. ...+. +.
T Consensus 319 ~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~lyvaD~~n~~I~~~~~~G~----v~t~~G~g~~~~~G~~dG 393 (433)
T 4hw6_A 319 HSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFYFCDRDSHTVRVLTPEGR----VTTYAGRGNSREWGYVDG 393 (433)
T ss_dssp TTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEEEEETTTTEEEEECTTSE----EEEEECCCTTCSSCCBCE
T ss_pred CCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEEEEECCCCEEEEECCCCC----EEEEEeCCCCCccccCCC
Confidence 2567899999 6666 59999999999999987652 11111 10
Q ss_pred ------CCCCCceeEEc-CCCCEEEEEec
Q 017371 263 ------LPGAPDNINLA-PDGTFWIAIIK 284 (372)
Q Consensus 263 ------~~g~p~~i~~d-~~G~lwva~~~ 284 (372)
....|.+|++| ++|+|||++..
T Consensus 394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~ 422 (433)
T 4hw6_A 394 ELRSQALFNHPTSIAYDMKRKCFYIGDCD 422 (433)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred ccccccEeCCCcEEEEECCCCEEEEEeCC
Confidence 11258999999 89999999987
No 60
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.66 E-value=3.1e-14 Score=129.10 Aligned_cols=176 Identities=13% Similarity=0.178 Sum_probs=127.6
Q ss_pred CCCCccEEEcCCCcEEEEec-CCeEEEEe--CCceEEEEe-----cCCCcccCeEEcCCCCEEEEeC-------------
Q 017371 78 VNHPEDASMDKNGVIYTATR-DGWIKRLQ--DGTWVNWKF-----IDSQTLVGLTSTKEGHLIICDN------------- 136 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~~-~g~i~~~~--~g~~~~~~~-----~~~~p~~gl~~d~dG~l~v~~~------------- 136 (372)
...|.+++++++|.+|+++. +++|.+++ +|+.+.+.. ....|. +++++++|++|+++.
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN-DVCLAPDGSLWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC-CEEECTTSCEEEEECSHHHHCGGGSSCC
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC-CEEECCCCCEEEECCccccccccccccc
Confidence 34689999999999999984 58899999 677665532 234577 899999999999853
Q ss_pred -----CCcEEEEcCCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCC-CC
Q 017371 137 -----ANGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SN 209 (372)
Q Consensus 137 -----~~gv~~~~~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-t~ 209 (372)
..+|++++.+| .+.+... ...+++++++++|++++++. ..++|+++|.+ ++
T Consensus 147 ~~~~~~~~l~~~~~~g~~~~~~~~-----~~~~~gi~~s~dg~~lv~~~-----------------~~~~i~~~~~~~~g 204 (296)
T 3e5z_A 147 EMELPGRWVFRLAPDGTLSAPIRD-----RVKPNGLAFLPSGNLLVSDT-----------------GDNATHRYCLNARG 204 (296)
T ss_dssp CCCSSSCEEEEECTTSCEEEEECC-----CSSEEEEEECTTSCEEEEET-----------------TTTEEEEEEECSSS
T ss_pred cccCCCcEEEEECCCCCEEEeecC-----CCCCccEEECCCCCEEEEeC-----------------CCCeEEEEEECCCC
Confidence 23799999557 5544322 34678999999998778765 45789998875 45
Q ss_pred eE---E-EEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEE-cCCC-CEEEEEe
Q 017371 210 IT---T-LVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINL-APDG-TFWIAII 283 (372)
Q Consensus 210 ~~---~-~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~-d~~G-~lwva~~ 283 (372)
+. . .+......|.+++++++|+ +|++. .++|.+|+.+|.. ...+. ...+ |.++++ .++| +||+++.
T Consensus 205 ~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g~~---~~~~~-~~~~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 205 ETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDGDE---LGRVL-TPQT-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp CEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTSCE---EEEEE-CSSC-CCEEEEESTTSCEEEEEET
T ss_pred cCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCCCE---EEEEE-CCCC-ceeEEEECCCCCEEEEEcC
Confidence 54 2 2212345688999999997 99988 6789999987532 22222 2223 889998 4676 5999986
Q ss_pred c
Q 017371 284 K 284 (372)
Q Consensus 284 ~ 284 (372)
.
T Consensus 277 ~ 277 (296)
T 3e5z_A 277 T 277 (296)
T ss_dssp T
T ss_pred C
Confidence 5
No 61
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.66 E-value=5.1e-16 Score=157.66 Aligned_cols=182 Identities=13% Similarity=0.103 Sum_probs=132.6
Q ss_pred CCCCccEEEcC-CCcEEEEe-cCCeEEEEe-CC-----ceEEEE-ecCCCcccCeEEc-CCCCEEEEeCC-CcEEEEcCC
Q 017371 78 VNHPEDASMDK-NGVIYTAT-RDGWIKRLQ-DG-----TWVNWK-FIDSQTLVGLTST-KEGHLIICDNA-NGLHKVSED 146 (372)
Q Consensus 78 ~~~p~~i~~d~-~G~l~v~~-~~g~i~~~~-~g-----~~~~~~-~~~~~p~~gl~~d-~dG~l~v~~~~-~gv~~~~~~ 146 (372)
+..|++|++++ ++.||+++ .+++|++++ ++ ....+. .....|. ||++| ..|+|||++.. ..|.+++.+
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC-CEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc-eEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 56899999996 67999998 678999998 54 222222 2345788 99999 56799999866 568888866
Q ss_pred C--cEEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcc
Q 017371 147 G--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFAN 222 (372)
Q Consensus 147 g--~~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~ 222 (372)
| .+.+.. ..+..|++|++|+ .|+||++|.. ..++|+++++++...+++. ..+..|+
T Consensus 484 g~~~~~l~~----~~~~~P~giavDp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 484 GVKRKTLFR----EQGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 543 (699)
T ss_dssp SCCEEEECC----CSSCCCCCEECCSSSSCCEECCCS----------------SSCCEEBCCSSSCCCCEESCSSCSSCC
T ss_pred CCceEEEEe----CCCCCcceEEEccCCCcEEEcccC----------------CCCeEEEEeCCCCCeeEEEeCCCCCcc
Confidence 6 444432 1235789999998 5789998753 2378999988744443433 5688999
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc--CCCCCCceeEEcCCCCEEEEEec
Q 017371 223 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 223 gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~--~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
||+++++++.|||+++..++|++++++|.. ...+.. ...+.|.+|++|.+ +||++++.
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~~~P~glavd~~-~lywtd~~ 603 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFED-KVFWTDII 603 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSSSC---CEEECCCSSSCSSCCCCEEETT-EEEEECST
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCCCc---eEEEEecCCcCCCceEeEEECC-EEEEEeCC
Confidence 999999988899999999999999998742 223332 12346999999986 67777776
No 62
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=7e-15 Score=141.09 Aligned_cols=181 Identities=12% Similarity=0.124 Sum_probs=126.2
Q ss_pred CCCCccEEEcCCCc-EEEEec-CC----eEEEEe-CCceE--EEEecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEcCC
Q 017371 78 VNHPEDASMDKNGV-IYTATR-DG----WIKRLQ-DGTWV--NWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVSED 146 (372)
Q Consensus 78 ~~~p~~i~~d~~G~-l~v~~~-~g----~i~~~~-~g~~~--~~~~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~~~ 146 (372)
+..|.+|++|++|. ||+++. ++ .++.++ ++.+. ........|. ++++++ +|+|||++.. ..|++++.+
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~-giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCN-GAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCC-CEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCce-EEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 56899999999997 999984 22 466677 55443 2223467899 999999 8999999876 468999954
Q ss_pred C--cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCC--CCeE---EEEeC--
Q 017371 147 G--VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS--SNIT---TLVAD-- 216 (372)
Q Consensus 147 g--~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~--t~~~---~~~~~-- 216 (372)
+ ...+... .. ...|++|+++++|+ ||++|. ..++|++++.+ ++++ ..+..
T Consensus 257 ~~~~~~~~~~-~~--~~~P~gia~~pdG~~lyv~d~-----------------~~~~I~~~~~d~~~~~~~~~~~~ag~~ 316 (430)
T 3tc9_A 257 TQETTPLFTI-QD--SGWEFHIQFHPSGNYAYIVVV-----------------NQHYILRSDYDWKTKRLTTPYIVCGQQ 316 (430)
T ss_dssp TTEEEEEEEC-SS--SSCCEEEEECTTSSEEEEEET-----------------TTTEEEEEEEETTTTEECCCEEEEECT
T ss_pred CCcEEEEEEc-CC--CCcceeEEEcCCCCEEEEEEC-----------------CCCEEEEEeCCcccccccceEEEeccC
Confidence 4 4333221 11 24688999999998 999986 46788887654 2322 22221
Q ss_pred -------------CccCcc-eEEEec--------CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC------------
Q 017371 217 -------------GFYFAN-GVALSR--------DEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN------------ 262 (372)
Q Consensus 217 -------------~~~~~~-gi~~~~--------dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~------------ 262 (372)
.+..|. |++++. +| .|||+++.+++|.+++.+|. ...+...
T Consensus 317 g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n~~I~~i~~~G~----v~~~~g~g~~~~~G~~dG~ 391 (430)
T 3tc9_A 317 GAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDRENHCIRILTPQGR----VTTFAGRGSNGTSGYNDGD 391 (430)
T ss_dssp TCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGGTEEEEECTTSE----EEEEEECCTTSSSSCBCEE
T ss_pred CCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEECCCcEEEEECCCCc----EEEEEeCCCCCCCcccCCC
Confidence 255687 788853 34 69999999999999986652 1111110
Q ss_pred -----CCCCCceeEEcC-CCCEEEEEec
Q 017371 263 -----LPGAPDNINLAP-DGTFWIAIIK 284 (372)
Q Consensus 263 -----~~g~p~~i~~d~-~G~lwva~~~ 284 (372)
.-..|.+|++|+ +|+|||++..
T Consensus 392 ~~~~~~~~~P~giavd~~~g~lyVaD~~ 419 (430)
T 3tc9_A 392 LRQEARFNHPEGIVYDEERECFFIGDRE 419 (430)
T ss_dssp TTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred chhhcEeCCCcEEEEECCCCEEEEEECC
Confidence 012699999999 6999999987
No 63
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=3e-14 Score=129.76 Aligned_cols=179 Identities=17% Similarity=0.217 Sum_probs=129.0
Q ss_pred CCCccEEEcCC-CcEEEEecCCeEEEEe-CCceEEE-Eec-----CCCcccCeEEcCCCCEEEEeCC-------------
Q 017371 79 NHPEDASMDKN-GVIYTATRDGWIKRLQ-DGTWVNW-KFI-----DSQTLVGLTSTKEGHLIICDNA------------- 137 (372)
Q Consensus 79 ~~p~~i~~d~~-G~l~v~~~~g~i~~~~-~g~~~~~-~~~-----~~~p~~gl~~d~dG~l~v~~~~------------- 137 (372)
..|.+++++++ |+||+++..++|++++ +|+.+.+ ... ...+. +++++++|++|+++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCN-DCAFDYEGNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCC-EEEECTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCCCCEEEEEeccCCCccccCCc-CEEECCCCCEEEEecCccccccccccccc
Confidence 46899999999 9999999766899999 7766554 221 23477 9999999999999864
Q ss_pred ---CcEEEEcCCC-cEEEeeecCCcccccccceEEc----cCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCC-
Q 017371 138 ---NGLHKVSEDG-VENFLSYVNGSKLRFANDVVEA----SDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS- 207 (372)
Q Consensus 138 ---~gv~~~~~~g-~~~l~~~~~~~~~~~~~~l~~d----~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~- 207 (372)
.++++++.++ ...+... ...+++++++ ++| .+|+++. ..++|+++|.+
T Consensus 150 ~~~~~l~~~~~~g~~~~~~~~-----~~~~~~i~~~~~~d~dg~~l~v~~~-----------------~~~~i~~~~~~~ 207 (314)
T 1pjx_A 150 EKFGSIYCFTTDGQMIQVDTA-----FQFPNGIAVRHMNDGRPYQLIVAET-----------------PTKKLWSYDIKG 207 (314)
T ss_dssp SSCEEEEEECTTSCEEEEEEE-----ESSEEEEEEEECTTSCEEEEEEEET-----------------TTTEEEEEEEEE
T ss_pred CCCCeEEEECCCCCEEEeccC-----CCCcceEEEecccCCCCCEEEEEEC-----------------CCCeEEEEECCC
Confidence 3689998557 5444322 2356789999 999 6899865 35789999864
Q ss_pred CCeEE---EEe--CC-c-cCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EE
Q 017371 208 SNITT---LVA--DG-F-YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FW 279 (372)
Q Consensus 208 t~~~~---~~~--~~-~-~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lw 279 (372)
+++.. .+. .. . ..|.+++++++|+ +|+++...++|.+|+.++.+.. ..+. .....|.+++++++|+ ||
T Consensus 208 ~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~--~~~~-~~~~~~~~i~~~~dg~~l~ 283 (314)
T 1pjx_A 208 PAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPK--MRIR-CPFEKPSNLHFKPQTKTIF 283 (314)
T ss_dssp TTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCS--EEEE-CSSSCEEEEEECTTSSEEE
T ss_pred CCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEe--EEEe-CCCCCceeEEECCCCCEEE
Confidence 35432 111 11 1 4688999999996 9999877889999998722221 1221 1224688999999998 99
Q ss_pred EEEec
Q 017371 280 IAIIK 284 (372)
Q Consensus 280 va~~~ 284 (372)
+++..
T Consensus 284 v~~~~ 288 (314)
T 1pjx_A 284 VTEHE 288 (314)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 99876
No 64
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.63 E-value=3.2e-13 Score=123.82 Aligned_cols=208 Identities=16% Similarity=0.216 Sum_probs=142.7
Q ss_pred EEEcCCCcEEEEecCCeEEEEe-CCceEEEEecC-CCcccCeEEcCCCCEEEEeCCCcEEEEcCCC-cEEEeeecCCccc
Q 017371 84 ASMDKNGVIYTATRDGWIKRLQ-DGTWVNWKFID-SQTLVGLTSTKEGHLIICDNANGLHKVSEDG-VENFLSYVNGSKL 160 (372)
Q Consensus 84 i~~d~~G~l~v~~~~g~i~~~~-~g~~~~~~~~~-~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g-~~~l~~~~~~~~~ 160 (372)
.+++ +|.||+++.+|.|++++ +|+........ .... .+..+++|+||++....+++.++.+| ..... ....
T Consensus 103 ~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~-~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~-~~~~--- 176 (330)
T 3hxj_A 103 FTIF-EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYA-TPIVSEDGTIYVGSNDNYLYAINPDGTEKWRF-KTND--- 176 (330)
T ss_dssp EEEE-TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCS-CCEECTTSCEEEECTTSEEEEECTTSCEEEEE-ECSS---
T ss_pred ceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceee-eeEEcCCCEEEEEcCCCEEEEECCCCCEeEEE-ecCC---
Confidence 3444 78999999889999999 75433222222 2234 78889899999998768899999447 32211 1121
Q ss_pred ccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCCEEEEEeCC
Q 017371 161 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESW 239 (372)
Q Consensus 161 ~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~~l~v~~~~ 239 (372)
.....+.+|++|+||++ . ++|+++|. +++..... ........++++++|+ +|++..
T Consensus 177 ~~~~~~~~d~~g~l~v~-------------------t-~~l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~- 233 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFG-------------------S-DKVYAINP-DGTEKWNFYAGYWTVTRPAISEDGT-IYVTSL- 233 (330)
T ss_dssp CCCSCCEECTTCCEEEE-------------------S-SSEEEECT-TSCEEEEECCSSCCCSCCEECTTSC-EEEEET-
T ss_pred CceeeeEEcCCCEEEEE-------------------e-CEEEEECC-CCcEEEEEccCCcceeceEECCCCe-EEEEcC-
Confidence 24567889999999996 2 67999994 45544332 2234456788888876 888764
Q ss_pred CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCc
Q 017371 240 KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG 319 (372)
Q Consensus 240 ~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 319 (372)
++.|++++.++... ..+. .....+..+.+|++|+||+++..
T Consensus 234 ~~gl~~~~~~g~~~---~~~~-~~~~~~~~~~~~~~g~l~v~t~~----------------------------------- 274 (330)
T 3hxj_A 234 DGHLYAINPDGTEK---WRFK-TGKRIESSPVIGNTDTIYFGSYD----------------------------------- 274 (330)
T ss_dssp TTEEEEECTTSCEE---EEEE-CSSCCCSCCEECTTSCEEEECTT-----------------------------------
T ss_pred CCeEEEECCCCCEe---EEee-CCCCccccceEcCCCeEEEecCC-----------------------------------
Confidence 56799997654322 2222 22234567889999999999875
Q ss_pred eEEEEECCCCcEEEEEECCCCCeeccceeeEE-ECCEEEEEeCCC
Q 017371 320 AHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTS 363 (372)
Q Consensus 320 ~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~-~~g~L~igs~~~ 363 (372)
+.++++|++|+.+..+..+.. .+.++.. .+|+||+++..+
T Consensus 275 ggl~~~d~~g~~~~~~~~~~~----~~~~~~~d~~g~l~~gt~~G 315 (330)
T 3hxj_A 275 GHLYAINPDGTEKWNFETGSW----IIATPVIDENGTIYFGTRNG 315 (330)
T ss_dssp CEEEEECTTSCEEEEEECSSC----CCSCCEECTTCCEEEECTTS
T ss_pred CCEEEECCCCcEEEEEEcCCc----cccceEEcCCCEEEEEcCCC
Confidence 589999999999888776532 3456666 579999999764
No 65
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.60 E-value=8.2e-13 Score=121.11 Aligned_cols=233 Identities=10% Similarity=0.096 Sum_probs=153.6
Q ss_pred CCCCccEEEcCCCc-EEEEec-CCeEEEEe--CCce-EEEEecCCCcccC-eEEcCCCCEEEEeCCC----cEEEEc-CC
Q 017371 78 VNHPEDASMDKNGV-IYTATR-DGWIKRLQ--DGTW-VNWKFIDSQTLVG-LTSTKEGHLIICDNAN----GLHKVS-ED 146 (372)
Q Consensus 78 ~~~p~~i~~d~~G~-l~v~~~-~g~i~~~~--~g~~-~~~~~~~~~p~~g-l~~d~dG~l~v~~~~~----gv~~~~-~~ 146 (372)
...| +++++++|. +|+++. ++.|+.++ +++. .........|. . ++++++|+.+++.... .+..++ .+
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM-ADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC-CCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc-cceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 3456 999999996 888884 88999999 5665 44445556777 6 9999999844454444 588888 55
Q ss_pred C--cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCe---EEEEeCCCCeE----EEEeC
Q 017371 147 G--VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQ---LLKYDPSSNIT----TLVAD 216 (372)
Q Consensus 147 g--~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~---v~~~d~~t~~~----~~~~~ 216 (372)
+ ...+.. + ..++++++++||+ +|+++.. .+. +|.++.+ +.. .....
T Consensus 118 ~~~~~~~~~---~---~~~~~~~~spdg~~l~~~~~~-----------------~~~~i~~~~~~~~-g~~~~~~~~~~~ 173 (331)
T 3u4y_A 118 NKFISTIPI---P---YDAVGIAISPNGNGLILIDRS-----------------SANTVRRFKIDAD-GVLFDTGQEFIS 173 (331)
T ss_dssp TEEEEEEEC---C---TTEEEEEECTTSSCEEEEEET-----------------TTTEEEEEEECTT-CCEEEEEEEEEC
T ss_pred CCeEEEEEC---C---CCccceEECCCCCEEEEEecC-----------------CCceEEEEEECCC-CcEeecCCcccc
Confidence 5 232211 1 2467999999995 8887542 233 4444433 332 12223
Q ss_pred CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcc-eeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhh
Q 017371 217 GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGK-LETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILN 294 (372)
Q Consensus 217 ~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~-~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~ 294 (372)
....|.+++++|||+++|++....+.|..|++.+.+... ...+. ....|.++++++||+ +|++...
T Consensus 174 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~---------- 241 (331)
T 3u4y_A 174 GGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTES---------- 241 (331)
T ss_dssp SSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSS----------
T ss_pred CCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcC----------
Confidence 445688999999999999999888899999987544311 22222 234689999999998 7887654
Q ss_pred cchhHHHHHHhcCccccccccCCCceEEEEECCC-CcE--EEEEECC---CCCeeccceeeEEE--CCEEEEEeCCCCeE
Q 017371 295 SSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTI--IRNLVDP---TGQLMSFVTSGLQV--DNHLYVISLTSNFI 366 (372)
Q Consensus 295 ~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~-g~~--~~~~~~~---~g~~~~~~t~~~~~--~g~L~igs~~~~~i 366 (372)
.+.|..+|.+ |++ +..+... ++........+... +..||+++..++.|
T Consensus 242 ------------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 297 (331)
T 3u4y_A 242 ------------------------TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISREL 297 (331)
T ss_dssp ------------------------EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEE
T ss_pred ------------------------CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcE
Confidence 4568888865 555 3333321 11111111234443 46899999999999
Q ss_pred EEEeCC
Q 017371 367 GKVQLS 372 (372)
Q Consensus 367 ~~~~~~ 372 (372)
.+++++
T Consensus 298 ~v~d~~ 303 (331)
T 3u4y_A 298 KVFTIS 303 (331)
T ss_dssp EEEETT
T ss_pred EEEEec
Confidence 999874
No 66
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.60 E-value=1e-13 Score=133.59 Aligned_cols=184 Identities=13% Similarity=0.140 Sum_probs=127.0
Q ss_pred CCCCCccEEE-------cCCCc-EEEEecCC-------eEEEEe---CCceE------EEEecCCCcccCeEEcC-CCCE
Q 017371 77 SVNHPEDASM-------DKNGV-IYTATRDG-------WIKRLQ---DGTWV------NWKFIDSQTLVGLTSTK-EGHL 131 (372)
Q Consensus 77 ~~~~p~~i~~-------d~~G~-l~v~~~~g-------~i~~~~---~g~~~------~~~~~~~~p~~gl~~d~-dG~l 131 (372)
.+..|.+|++ |++|. ||+++..+ .|+.++ +|.+. .+. ...+|+ ++++++ +|.|
T Consensus 184 ~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~-giavdp~~g~L 261 (496)
T 3kya_A 184 PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCN-GATIHPINGEL 261 (496)
T ss_dssp SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCC-CEEECTTTCCE
T ss_pred ccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-cCCCce-EEEEcCCCCeE
Confidence 4667999999 99886 99999543 377886 35553 333 456899 999998 6899
Q ss_pred EEEeCCCc-EEEEc-C-------CC-c-E-----------EEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCccc
Q 017371 132 IICDNANG-LHKVS-E-------DG-V-E-----------NFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEY 188 (372)
Q Consensus 132 ~v~~~~~g-v~~~~-~-------~g-~-~-----------~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~ 188 (372)
|+++...+ |++++ . ++ . + .+.. .+ ....+.+|+++++|+ |||+|.
T Consensus 262 Yvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~-~~--~~~~p~~ia~~p~G~~lYvaD~--------- 329 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFT-IA--DPSWEFQIFIHPTGKYAYFGVI--------- 329 (496)
T ss_dssp EEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEE-CS--SSSCCEEEEECTTSSEEEEEET---------
T ss_pred EEEECCCCEEEEEecccccccccCceeecccccccccccceeEe-cC--CCCCceEEEEcCCCCEEEEEeC---------
Confidence 99998765 99999 5 45 4 1 2211 11 123577999999998 899987
Q ss_pred ccccccccCCCeEEEEeC--CCCeE---EEEeC---------------CccCcc-eEEEe-------cCCCEEEEEeCCC
Q 017371 189 CLDILEGKPHGQLLKYDP--SSNIT---TLVAD---------------GFYFAN-GVALS-------RDEDYVVVCESWK 240 (372)
Q Consensus 189 ~~~~~~~~~~g~v~~~d~--~t~~~---~~~~~---------------~~~~~~-gi~~~-------~dg~~l~v~~~~~ 240 (372)
.+++|++++. .++.+ ..++. .+..|. +++++ .++ .|||+++.+
T Consensus 330 --------~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N 400 (496)
T 3kya_A 330 --------NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLN 400 (496)
T ss_dssp --------TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE-EEEEEEGGG
T ss_pred --------CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCC-eEEEEECCC
Confidence 5678999654 33433 23321 245688 77776 344 599999999
Q ss_pred CeEEEEEccCCCCccee--------------eeccC------CCCCCceeEEcCC-CCEEEEEec
Q 017371 241 FRCRKYWLKGERKGKLE--------------TFAEN------LPGAPDNINLAPD-GTFWIAIIK 284 (372)
Q Consensus 241 ~~i~~~~~~g~~~~~~~--------------~~~~~------~~g~p~~i~~d~~-G~lwva~~~ 284 (372)
++|.+++.+|. ..... .+.+. .-..|.+|++|++ |+|||++..
T Consensus 401 ~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~ 464 (496)
T 3kya_A 401 FCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQV 464 (496)
T ss_dssp TEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETT
T ss_pred CEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCC
Confidence 99999997652 11110 00011 1125889999997 999999988
No 67
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.59 E-value=4e-12 Score=117.24 Aligned_cols=217 Identities=14% Similarity=0.154 Sum_probs=150.7
Q ss_pred CCCccEEEcCCCc-EEEEe-cCCeEEEEe--CCceEE-EEecCC---------CcccCeEEcCCCC-EEEEeC--CCcEE
Q 017371 79 NHPEDASMDKNGV-IYTAT-RDGWIKRLQ--DGTWVN-WKFIDS---------QTLVGLTSTKEGH-LIICDN--ANGLH 141 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~-~~g~i~~~~--~g~~~~-~~~~~~---------~p~~gl~~d~dG~-l~v~~~--~~gv~ 141 (372)
..|.+++++++|. +|+++ .++.|..++ +++... +....+ .|. +++++++|+ +|+++. ...+.
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR-ELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE-EEEEETTTTEEEEEEESSSCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc-eEEECCCCCEEEEEecCCCceEE
Confidence 3689999999986 89888 578999999 565433 322211 257 899999986 788773 24488
Q ss_pred EEc-CCC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-
Q 017371 142 KVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG- 217 (372)
Q Consensus 142 ~~~-~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~- 217 (372)
.+| .++ ...... ..+ ..+.+++++++|+ +|+++ ..+.|+.+|..+++.......
T Consensus 168 ~~d~~~~~~~~~~~-~~~---~~~~~~~~s~dg~~l~~~~------------------~~~~i~~~d~~~~~~~~~~~~~ 225 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQ-NTG---KMSTGLALDSEGKRLYTTN------------------ADGELITIDTADNKILSRKKLL 225 (353)
T ss_dssp EEETTTTEEEEEEC-CCC---TTCCCCEEETTTTEEEEEC------------------TTSEEEEEETTTTEEEEEEECC
T ss_pred EEcCCCCceEEEec-CCC---CccceEEECCCCCEEEEEc------------------CCCeEEEEECCCCeEEEEEEcC
Confidence 898 555 222111 111 3478899999986 66653 357899999988876654322
Q ss_pred ----ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHH
Q 017371 218 ----FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKI 292 (372)
Q Consensus 218 ----~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~ 292 (372)
...+.++++++|++++|+++...+.|+.+++.+.+.. ..+. . +.+.+++++++|+ +|++...
T Consensus 226 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~--~~~~--~-~~~~~~~~s~dg~~l~v~~~~-------- 292 (353)
T 3vgz_A 226 DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL--AKVA--A-PESLAVLFNPARNEAYVTHRQ-------- 292 (353)
T ss_dssp CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE--EEEE--C-SSCCCEEEETTTTEEEEEETT--------
T ss_pred CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE--EEEE--c-CCCceEEECCCCCEEEEEECC--------
Confidence 3345679999999999999988889999998654321 1121 1 2367899999997 8888865
Q ss_pred hhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE-C-CEEEEEeCC
Q 017371 293 LNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLT 362 (372)
Q Consensus 293 ~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~-g~L~igs~~ 362 (372)
.+.|..+|. +++.+..+.... .+.++... + +.||+++..
T Consensus 293 --------------------------~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 293 --------------------------AGKVSVIDAKSYKVVKTFDTPT-----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp --------------------------TTEEEEEETTTTEEEEEEECCS-----EEEEEEECTTSCEEEEEEEC
T ss_pred --------------------------CCeEEEEECCCCeEEEEEecCC-----CCCeEEEcCCCCEEEEEEcc
Confidence 467888885 477777776532 35666665 3 569998876
No 68
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.58 E-value=9.2e-14 Score=127.93 Aligned_cols=199 Identities=16% Similarity=0.146 Sum_probs=134.4
Q ss_pred ecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCccccc
Q 017371 114 FIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCL 190 (372)
Q Consensus 114 ~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~ 190 (372)
.....+. +++++++|+||+++.. .+|++++ .++ ...+... . ...+.+++++++|++|+++...
T Consensus 42 ~~~~~~~-~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~---~~~~~~i~~~~dg~l~v~~~~~--------- 107 (333)
T 2dg1_A 42 KKGLQLE-GLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS-H---KANPAAIKIHKDGRLFVCYLGD--------- 107 (333)
T ss_dssp SSCCCEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC-S---SSSEEEEEECTTSCEEEEECTT---------
T ss_pred ccCcccc-CcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC-C---CCCcceEEECCCCcEEEEeCCC---------
Confidence 3344566 9999999999998654 5699999 555 5444321 1 1357899999999999986520
Q ss_pred ccccccCCCeEEEEeCCCCeEEEEeC---CccCcceEEEecCCCEEEEEeCC------CCeEEEEEccCCCCcceeeecc
Q 017371 191 DILEGKPHGQLLKYDPSSNITTLVAD---GFYFANGVALSRDEDYVVVCESW------KFRCRKYWLKGERKGKLETFAE 261 (372)
Q Consensus 191 ~~~~~~~~g~v~~~d~~t~~~~~~~~---~~~~~~gi~~~~dg~~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~ 261 (372)
....++|+++|+++++.+.+.. ....+++++++++|+ +|+++.. ..+|++++.++.+. ..+..
T Consensus 108 ----~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~ 179 (333)
T 2dg1_A 108 ----FKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTV---TPIIQ 179 (333)
T ss_dssp ----SSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCE---EEEEE
T ss_pred ----CCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEE---EEeec
Confidence 0123689999998887764432 234578899999997 8888764 36799998765322 22221
Q ss_pred CCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC--CCcEEEEEE--
Q 017371 262 NLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE--DGTIIRNLV-- 336 (372)
Q Consensus 262 ~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~--~g~~~~~~~-- 336 (372)
. ...|.+++++++|+ +|++... .+.|.+++. +|+.+..+.
T Consensus 180 ~-~~~~~~i~~~~dg~~l~v~~~~----------------------------------~~~i~~~d~~~~g~~~~~~~~~ 224 (333)
T 2dg1_A 180 N-ISVANGIALSTDEKVLWVTETT----------------------------------ANRLHRIALEDDGVTIQPFGAT 224 (333)
T ss_dssp E-ESSEEEEEECTTSSEEEEEEGG----------------------------------GTEEEEEEECTTSSSEEEEEEE
T ss_pred C-CCcccceEECCCCCEEEEEeCC----------------------------------CCeEEEEEecCCCcCcccccce
Confidence 1 12478999999996 9998865 346777775 455433221
Q ss_pred ---CCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 337 ---DPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 337 ---~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
...+ ...+..+.++ +|+||+++..++.|.+++.
T Consensus 225 ~~~~~~~--~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 225 IPYYFTG--HEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEECCS--SSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred EEEecCC--CCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 1112 1245667776 6899999988889998874
No 69
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.57 E-value=1.8e-12 Score=116.83 Aligned_cols=215 Identities=13% Similarity=0.172 Sum_probs=147.9
Q ss_pred CCcEEEEecCCeEEEEe--CCceEEEEecC---CCcccCeEEcCCCCEEEEeCCCcEEEEcCCCcEEEeeecCCcccccc
Q 017371 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFID---SQTLVGLTSTKEGHLIICDNANGLHKVSEDGVENFLSYVNGSKLRFA 163 (372)
Q Consensus 89 ~G~l~v~~~~g~i~~~~--~g~~~~~~~~~---~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g~~~l~~~~~~~~~~~~ 163 (372)
+..|+.+..+++|+.++ +|+.. |.... ..+. +++++++|+++++ ...+++.++++|........+. ...+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~-w~~~~~~~~~~~-~~~~~pdG~ilvs-~~~~V~~~d~~G~~~W~~~~~~--~~~~ 79 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIV-WEYPLEKGWECN-SVAATKAGEILFS-YSKGAKMITRDGRELWNIAAPA--GCEM 79 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEE-EEEECCTTCCCC-EEEECTTSCEEEE-CBSEEEEECTTSCEEEEEECCT--TCEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEE-EEeCCCccCCCc-CeEECCCCCEEEe-CCCCEEEECCCCCEEEEEcCCC--Cccc
Confidence 33445555788999999 66654 33322 2567 8999999999995 4578999998772222111111 1234
Q ss_pred cceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe--C----CccCcceEEEecCCCEEEEEe
Q 017371 164 NDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA--D----GFYFANGVALSRDEDYVVVCE 237 (372)
Q Consensus 164 ~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~--~----~~~~~~gi~~~~dg~~l~v~~ 237 (372)
+...+.++|++++++.. ..++|+.+|++.+.+..+. . ....+.++++.++|+ ++++.
T Consensus 80 ~~~~~~~dG~~lv~~~~----------------~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~ 142 (276)
T 3no2_A 80 QTARILPDGNALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPL 142 (276)
T ss_dssp EEEEECTTSCEEEEEES----------------TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEE
T ss_pred cccEECCCCCEEEEecC----------------CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEe
Confidence 56788899999998642 1578999998633332221 1 123466788999998 66778
Q ss_pred CCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCC
Q 017371 238 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 317 (372)
Q Consensus 238 ~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 317 (372)
..+++|..|+.+|.... .+. .++.|.+....++|+++|+...
T Consensus 143 ~~~~~v~~~d~~G~~~w---~~~--~~~~~~~~~~~~~g~~~v~~~~--------------------------------- 184 (276)
T 3no2_A 143 FATSEVREIAPNGQLLN---SVK--LSGTPFSSAFLDNGDCLVACGD--------------------------------- 184 (276)
T ss_dssp TTTTEEEEECTTSCEEE---EEE--CSSCCCEEEECTTSCEEEECBT---------------------------------
T ss_pred cCCCEEEEECCCCCEEE---EEE--CCCCccceeEcCCCCEEEEeCC---------------------------------
Confidence 88899999998754221 222 2345888999999999999876
Q ss_pred CceEEEEECCC-CcEEEEEECCC--CCeeccceeeEEE-CCEEEEEeCCCC
Q 017371 318 GGAHLIHVAED-GTIIRNLVDPT--GQLMSFVTSGLQV-DNHLYVISLTSN 364 (372)
Q Consensus 318 ~~~~v~~~~~~-g~~~~~~~~~~--g~~~~~~t~~~~~-~g~L~igs~~~~ 364 (372)
.+.|+.+|++ |+++..+...+ +..+..++++... +|++|+++++++
T Consensus 185 -~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~ 234 (276)
T 3no2_A 185 -AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGH 234 (276)
T ss_dssp -TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTT
T ss_pred -CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCc
Confidence 4689999998 99999997532 3335667777775 799999998553
No 70
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.56 E-value=4.9e-13 Score=124.84 Aligned_cols=217 Identities=12% Similarity=0.117 Sum_probs=137.2
Q ss_pred ceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEcCCC-cEEEeee-cCCcccccccceEEccC----CcEEEEeCCC
Q 017371 108 TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDG-VENFLSY-VNGSKLRFANDVVEASD----GSLYFTVSSS 181 (372)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g-~~~l~~~-~~~~~~~~~~~l~~d~d----G~i~vtd~~~ 181 (372)
+++.+......|. +|+++++|+|||++....|++++ +| .+.+... ........+.+|+++++ |.||+++...
T Consensus 22 ~~~~va~~l~~P~-~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 22 RVEEVVGGLEVPW-ALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CEEEEECCCSCEE-EEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEEECCCCCce-EEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 4455555667899 99999999999999876788888 66 4444321 11122457889999997 8999987520
Q ss_pred CCCCcccccccccccCCCeEEEEeCCCC---eEEEEeC-------CccCcceEEEecCCCEEEEEeC-------------
Q 017371 182 KYLPHEYCLDILEGKPHGQLLKYDPSSN---ITTLVAD-------GFYFANGVALSRDEDYVVVCES------------- 238 (372)
Q Consensus 182 ~~~~~~~~~~~~~~~~~g~v~~~d~~t~---~~~~~~~-------~~~~~~gi~~~~dg~~l~v~~~------------- 238 (372)
. .....+|++++.+.+ +.+.+.+ ..+.++++++++||. ||++..
T Consensus 100 ~------------~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~ 166 (352)
T 2ism_A 100 E------------GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLAS 166 (352)
T ss_dssp T------------TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTC
T ss_pred C------------CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCC
Confidence 0 001267999987644 2233322 235678999999995 999863
Q ss_pred CCCeEEEEEccCCCC----------cceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhcC
Q 017371 239 WKFRCRKYWLKGERK----------GKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 307 (372)
Q Consensus 239 ~~~~i~~~~~~g~~~----------~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p 307 (372)
...+|+|++.+|.-. ...+.+...+ ..|.++++|+ +|+||+++...... +. .|
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~-----------~~----~~ 230 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGE-----------QG----YG 230 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC---------------------C
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCC-----------CC----CC
Confidence 225899999886210 1223343222 2489999999 89999999873110 00 00
Q ss_pred ccccccccCCCceEEEEECCCC-----------------cEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEe
Q 017371 308 KLFSQFITLGGGAHLIHVAEDG-----------------TIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 308 ~~~~~~~~~~~~~~v~~~~~~g-----------------~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~ 370 (372)
...+..+.+.+ ..+..+ .+ ...++.+.+.+|+||+++..+..|.+++
T Consensus 231 -----------~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~----~~ap~G~~~~~G~l~v~~~~~~~v~~v~ 294 (352)
T 2ism_A 231 -----------HDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQ----GFPPGNLAFFRGDLYVAGLRGQALLRLV 294 (352)
T ss_dssp -----------CCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TT----CCCEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred -----------CeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CC----CCCCcceEEECCEEEEEECCCCEEEEEE
Confidence 01233332211 111111 11 1246677778899999999999999987
Q ss_pred C
Q 017371 371 L 371 (372)
Q Consensus 371 ~ 371 (372)
+
T Consensus 295 ~ 295 (352)
T 2ism_A 295 L 295 (352)
T ss_dssp E
T ss_pred E
Confidence 5
No 71
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.56 E-value=1.6e-13 Score=124.88 Aligned_cols=178 Identities=10% Similarity=0.070 Sum_probs=127.7
Q ss_pred CCCccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEec-----CCCcccCeEEcCCCCEEEEeCC------------Cc
Q 017371 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI-----DSQTLVGLTSTKEGHLIICDNA------------NG 139 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~-----~~~p~~gl~~d~dG~l~v~~~~------------~g 139 (372)
..|.+++++++|++|+++ +++|++++ +++++.+... ..+++ ++++|++|++|+++.. .+
T Consensus 54 ~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCC-CEEECCCCCEEEecCCcccccccccCCCcE
Confidence 368899999999999998 56799999 5777666542 23467 8999999999998732 25
Q ss_pred EEEEcCCC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeC--CCCeEE---
Q 017371 140 LHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP--SSNITT--- 212 (372)
Q Consensus 140 v~~~~~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~--~t~~~~--- 212 (372)
|++++.+| ...+... ...++++++++||+ +|++++ ..++|+++|. .+++..
T Consensus 132 l~~~d~~g~~~~~~~~-----~~~pngi~~spdg~~lyv~~~-----------------~~~~i~~~~~d~~~G~~~~~~ 189 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFDQ-----VDISNGLDWSLDHKIFYYIDS-----------------LSYSVDAFDYDLQTGQISNRR 189 (297)
T ss_dssp EEEECTTSCEEEEEEE-----ESBEEEEEECTTSCEEEEEEG-----------------GGTEEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCEEEEeec-----cccccceEEcCCCCEEEEecC-----------------CCCcEEEEeccCCCCcccCcE
Confidence 88998667 5444332 34688999999995 899875 3567888864 556542
Q ss_pred EEeC---CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEc-CCC-CEEEEEec
Q 017371 213 LVAD---GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLA-PDG-TFWIAIIK 284 (372)
Q Consensus 213 ~~~~---~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d-~~G-~lwva~~~ 284 (372)
.+.. ....|.|++++++|+ +|++...+++|.+|++++.+.. ..+ ......|.++++. +++ .|||++..
T Consensus 190 ~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~--~~i-~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 190 SVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRL--QTV-KLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEE--EEE-ECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEE--EEE-ECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 2221 235689999999996 9999988889999998632211 111 1112357889997 665 69999975
No 72
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.56 E-value=4.5e-12 Score=114.19 Aligned_cols=233 Identities=10% Similarity=0.051 Sum_probs=154.8
Q ss_pred ceEecCCCCCCCccEEEcCCCcEEEEecCCeEEEEe-CCceEE-EEecC-CCcccCeEEcCCCCEEEEeCC-C-cEEEEc
Q 017371 70 FIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQ-DGTWVN-WKFID-SQTLVGLTSTKEGHLIICDNA-N-GLHKVS 144 (372)
Q Consensus 70 ~~~~~~g~~~~p~~i~~d~~G~l~v~~~~g~i~~~~-~g~~~~-~~~~~-~~p~~gl~~d~dG~l~v~~~~-~-gv~~~~ 144 (372)
++.+..+....+++++++++|++++ +.+++|+.++ +|+... +.... .... +..+.++|++++++.. . .++.++
T Consensus 28 ~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~-~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 28 VWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQ-TARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp EEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEE-EEEECTTSCEEEEEESTTEEEEEEC
T ss_pred EEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCcccc-ccEECCCCCEEEEecCCCCEEEEEe
Confidence 3444433224789999999999999 4577899999 776432 22221 2344 7788899999999765 3 577888
Q ss_pred CCC--cEEEeeecC-CcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCc
Q 017371 145 EDG--VENFLSYVN-GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA 221 (372)
Q Consensus 145 ~~g--~~~l~~~~~-~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~ 221 (372)
++| +..+..... ...+..+..++++++|++++++. .+++|+.+|++ |+..+....-..|
T Consensus 106 ~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~-----------------~~~~v~~~d~~-G~~~w~~~~~~~~ 167 (276)
T 3no2_A 106 MKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF-----------------ATSEVREIAPN-GQLLNSVKLSGTP 167 (276)
T ss_dssp TTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET-----------------TTTEEEEECTT-SCEEEEEECSSCC
T ss_pred CCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec-----------------CCCEEEEECCC-CCEEEEEECCCCc
Confidence 777 333322111 12234567888999999999865 46899999998 7776655444567
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEcc-CCCCcceeeeccCCC----CCCceeEEcCCCCEEEEEecCchhHHHHhhcc
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLK-GERKGKLETFAENLP----GAPDNINLAPDGTFWIAIIKLDARRMKILNSS 296 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~----g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~ 296 (372)
.++...++|+ +++++..+++|+.++.+ |....+.. ....+ ..|.++.+.++|++||+++.....-
T Consensus 168 ~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~--~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~------- 237 (276)
T 3no2_A 168 FSSAFLDNGD-CLVACGDAHCFVQLNLESNRIVRRVN--ANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDRE------- 237 (276)
T ss_dssp CEEEECTTSC-EEEECBTTSEEEEECTTTCCEEEEEE--GGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTT-------
T ss_pred cceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEEEEec--CCCCCCccccccccceEcCCCCEEEEeccCcccc-------
Confidence 7888888887 77777777899999987 43222111 11111 2478999999999999997410000
Q ss_pred hhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEE
Q 017371 297 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQ 351 (372)
Q Consensus 297 ~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~ 351 (372)
.+....+.+++++++|+++..|.+... +..++.++.
T Consensus 238 -----------------~~~~~~~~~~~~~~~g~~~W~~~~~~~--~~~~~~~~~ 273 (276)
T 3no2_A 238 -----------------AGKGKHPQLVEIDSEGKVVWQLNDKVK--FGMISTICP 273 (276)
T ss_dssp -----------------GGGSCCCSEEEECTTSBEEEEECCTTT--SCCCCEEEE
T ss_pred -----------------ccccCCceEEEECCCCCEEEEecCccc--ccceeeeee
Confidence 000024579999999999999876443 444555543
No 73
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.56 E-value=3e-13 Score=123.46 Aligned_cols=179 Identities=13% Similarity=0.149 Sum_probs=126.9
Q ss_pred CCCccEEEcCCCcEEEEec-CCeEEEEe-CCceEEEEec-----CCCcccCeEEcCCCCEEEEeC---------------
Q 017371 79 NHPEDASMDKNGVIYTATR-DGWIKRLQ-DGTWVNWKFI-----DSQTLVGLTSTKEGHLIICDN--------------- 136 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~~-~g~i~~~~-~g~~~~~~~~-----~~~p~~gl~~d~dG~l~v~~~--------------- 136 (372)
..|.++++|++|+||+++. +++|.+++ +|+++.+... ...|. +++++++|++|+++.
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~-~i~~d~dG~l~~td~~~g~~~~~~~~~~~~ 164 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPN-DLIVARDGAIWFTDPPFGLRKPSQGCPADP 164 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCC-CEEECTTSCEEEECCSGGGSCGGGSCCCCC
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCC-CEEECCCCCEEEeCcCCCcccccccccccc
Confidence 4688999999999999984 57899999 8877665432 24577 899999999999752
Q ss_pred ---CCcEEEEc-CCC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe
Q 017371 137 ---ANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI 210 (372)
Q Consensus 137 ---~~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~ 210 (372)
..+|++++ .+| .+.+. . +..++++++++||+ ||+++.... ....++|++++.+++.
T Consensus 165 ~~~~~~v~~~d~~~g~~~~~~-~-----~~~p~gl~~spdg~~lyv~~~~~~------------~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 165 ELAHHSVYRLPPDGSPLQRMA-D-----LDHPNGLAFSPDEQTLYVSQTPEQ------------GHGSVEITAFAWRDGA 226 (305)
T ss_dssp SSSCEEEEEECSSSCCCEEEE-E-----ESSEEEEEECTTSSEEEEEECCC---------------CCCEEEEEEEETTE
T ss_pred ccCCCeEEEEcCCCCcEEEEe-c-----CCCCcceEEcCCCCEEEEEecCCc------------CCCCCEEEEEEecCCC
Confidence 24699999 467 66553 2 34688999999996 999875310 0113679888876443
Q ss_pred E---EEEeC-CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCC-CEEEEEec
Q 017371 211 T---TLVAD-GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIK 284 (372)
Q Consensus 211 ~---~~~~~-~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwva~~~ 284 (372)
. +.+.. ....|.|++++++|+ +|++. .++|++|+.+|.... .+. .+..|.+++++++| .||+++..
T Consensus 227 l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~~~~---~~~--~~~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 227 LHDRRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQLLG---HIP--TPGTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EEEEEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSCEEE---EEE--CSSCCCEEEECTTSCEEEEEETT
T ss_pred ccCCeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCCEEE---EEE--CCCceeEEEEeCCCCEEEEEcCC
Confidence 2 12221 235688999999998 88886 457999998664222 222 22248899998877 69998865
No 74
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.55 E-value=5e-13 Score=137.25 Aligned_cols=227 Identities=13% Similarity=0.157 Sum_probs=144.0
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe--CC---ceEEEEec-------CCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ--DG---TWVNWKFI-------DSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG 147 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~--~g---~~~~~~~~-------~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g 147 (372)
..+++.|++|.||+|+.+ .+++++ .+ .++.+... ..... .|..|++|+||++.. .||.+++ .++
T Consensus 326 v~~i~~D~~g~lWiGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~-~GL~~~~~~~~ 402 (758)
T 3ott_A 326 FYSLFRDSKGFYWFGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIR-HIYEDKEQQLWIATD-GSINRYDYATR 402 (758)
T ss_dssp EEEEEECTTCCEEEEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCEE-EEEECTTSCEEEEET-TEEEEEETTTT
T ss_pred EEEEEEcCCCCEEEeeCC-cceeecccccccceeEEeccCCcCCCCCCCceE-EEEECCCCCEEEEeC-CcHhhcCcCCC
Confidence 356889999999999954 699998 33 23333211 12345 788999999999984 5999999 556
Q ss_pred -cEEEeeecC-C-cccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC------CeEE---EE-
Q 017371 148 -VENFLSYVN-G-SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS------NITT---LV- 214 (372)
Q Consensus 148 -~~~l~~~~~-~-~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t------~~~~---~~- 214 (372)
++.+..... + .....+..+..|++|+||++.. .++|+++|+++ +.+. .+
T Consensus 403 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~------------------~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 403 QFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTC------------------LGGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp EEEEEEEECCC--CBSSSEEEEEECTTSEEEEEES------------------SSCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred cEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEEC------------------CCceEEEccccccccCCcceecccccc
Confidence 555432111 1 1223466789999999999743 35799998652 1221 11
Q ss_pred -eCCccC--cceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc-CCC--CCCceeEEcCCCCEEEEEecCchh
Q 017371 215 -ADGFYF--ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NLP--GAPDNINLAPDGTFWIAIIKLDAR 288 (372)
Q Consensus 215 -~~~~~~--~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~-~~~--g~p~~i~~d~~G~lwva~~~~~~~ 288 (372)
..++.. ...+..+++|+ +|+......+|.+|+.... ....+.. .+. ..+..+..|++|+||+++..
T Consensus 465 ~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~~---~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~---- 536 (758)
T 3ott_A 465 VHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRTR---EVTKLFADELTGEKSPNYLLCDEDGLLWVGFHG---- 536 (758)
T ss_dssp GGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTTT---EEEEECTTTSCGGGCEEEEEECTTSCEEEEETT----
T ss_pred cccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCCC---ceEEecCCCcCCCcccceEEECCCCCEEEEecC----
Confidence 112221 23566777776 8883333467999997543 2323321 111 23567889999999999854
Q ss_pred HHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEE
Q 017371 289 RMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGK 368 (372)
Q Consensus 289 ~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~ 368 (372)
++.+++++.+....+. .+|...+.+.++.+++|+||+++. +.|.+
T Consensus 537 --------------------------------Gl~~~~~~~~~~~~~~-~~gl~~~~i~~i~~~~g~lWi~t~--~Gl~~ 581 (758)
T 3ott_A 537 --------------------------------GVMRINPKDESQQSIS-FGSFSNNEILSMTCVKNSIWVSTT--NGLWI 581 (758)
T ss_dssp --------------------------------EEEEECC--CCCCBCC-CCC---CCEEEEEEETTEEEEEES--SCEEE
T ss_pred --------------------------------ceEEEecCCCceEEec-ccCCCccceEEEEECCCCEEEECC--CCeEE
Confidence 7999998765554443 235444567888888899999994 55777
Q ss_pred EeC
Q 017371 369 VQL 371 (372)
Q Consensus 369 ~~~ 371 (372)
++.
T Consensus 582 ~~~ 584 (758)
T 3ott_A 582 IDR 584 (758)
T ss_dssp EET
T ss_pred EcC
Confidence 764
No 75
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.54 E-value=9.5e-13 Score=135.18 Aligned_cols=224 Identities=15% Similarity=0.195 Sum_probs=143.8
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEec-------CCCcccCeEEcCCCCEEEEeCCCcEEEEcCCC----
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI-------DSQTLVGLTSTKEGHLIICDNANGLHKVSEDG---- 147 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~-------~~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g---- 147 (372)
..+|+.|++|.||+|+ ++.|.+++ +++++.+... ..... .+..|++|+|||+....||++++++.
T Consensus 375 v~~i~~d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~ 452 (758)
T 3ott_A 375 IRHIYEDKEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTY-YIFEDTAGQLWISTCLGGIFVVDKHKLMQS 452 (758)
T ss_dssp EEEEEECTTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEE-EEEECTTSEEEEEESSSCEEEEEHHHHHHC
T ss_pred eEEEEECCCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEE-EEEEcCCCCEEEEECCCceEEEcccccccc
Confidence 4678999999999999 45799999 5666665421 12345 78889999999998777999998321
Q ss_pred -cEEEe-----eecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-c--
Q 017371 148 -VENFL-----SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-F-- 218 (372)
Q Consensus 148 -~~~l~-----~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~-~-- 218 (372)
...+. ....+.....+..|..|++|+||+... ..++|+++|+++++++.+... +
T Consensus 453 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~-----------------t~~Gl~~~d~~~~~~~~~~~~~~~~ 515 (758)
T 3ott_A 453 TSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLY-----------------NNKGIDKINPRTREVTKLFADELTG 515 (758)
T ss_dssp CSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEET-----------------TCSSEEEEETTTTEEEEECTTTSCG
T ss_pred CCcceecccccccccccccceeeeEEEcCCCCEEEEcc-----------------CCCCcEEEeCCCCceEEecCCCcCC
Confidence 01111 111222223567899999999999211 235699999998888776422 1
Q ss_pred -cCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCC-CCCceeEEcCCCCEEEEEecCchhHHHHhhcc
Q 017371 219 -YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIAIIKLDARRMKILNSS 296 (372)
Q Consensus 219 -~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~-g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~ 296 (372)
..++.+..+.+|+ +|++.. ..|.+|+.++.+..... .+.++ ....++..| +|+||+++..
T Consensus 516 ~~~~~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~~~~~--~~gl~~~~i~~i~~~-~g~lWi~t~~------------ 577 (758)
T 3ott_A 516 EKSPNYLLCDEDGL-LWVGFH--GGVMRINPKDESQQSIS--FGSFSNNEILSMTCV-KNSIWVSTTN------------ 577 (758)
T ss_dssp GGCEEEEEECTTSC-EEEEET--TEEEEECC--CCCCBCC--CCC---CCEEEEEEE-TTEEEEEESS------------
T ss_pred CcccceEEECCCCC-EEEEec--CceEEEecCCCceEEec--ccCCCccceEEEEEC-CCCEEEECCC------------
Confidence 2345677777776 888753 47999987654322211 01121 123446665 8999999965
Q ss_pred hhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEe
Q 017371 297 KLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 297 ~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~ 370 (372)
++.+++++...+..+..++.. +. ..+... +|+||+|+.. .+.+++
T Consensus 578 ------------------------Gl~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~G~l~fG~~~--Gl~~f~ 623 (758)
T 3ott_A 578 ------------------------GLWIIDRKTMDARQQNMTNKR-FT--SLLFDPKEDCVYLGGAD--GFGISH 623 (758)
T ss_dssp ------------------------CEEEEETTTCCEEEC--CCCC-CS--EEEEETTTTEEEEECBS--EEEEEE
T ss_pred ------------------------CeEEEcCCCceeEEecCCCCc-ee--eeEEECCCCcEEEecCC--ceEEEC
Confidence 689999887666666555432 22 233333 7999999965 455554
No 76
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.53 E-value=2.4e-12 Score=120.17 Aligned_cols=165 Identities=9% Similarity=0.014 Sum_probs=109.2
Q ss_pred ceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEcCCCcEEEee-ecCCcccccccceEEccC----CcEEEEeCCCC
Q 017371 108 TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDGVENFLS-YVNGSKLRFANDVVEASD----GSLYFTVSSSK 182 (372)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g~~~l~~-~~~~~~~~~~~~l~~d~d----G~i~vtd~~~~ 182 (372)
+++.+......|. +|+++++|+|||++....|++++.+|.+.+.. .........+.+|+++++ |.||+++...
T Consensus 20 ~~~~va~~l~~P~-~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~- 97 (354)
T 3a9g_A 20 KISEVASDLEVPW-SIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYF- 97 (354)
T ss_dssp EEEEEECSCSCEE-EEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEE-
T ss_pred EEEEEeCCCCCCe-EEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEecc-
Confidence 3445555667899 99999999999999876788888656422221 111112346889999996 8999986410
Q ss_pred CCCcccccccccccCCCeEEEEeCCCC-----eEEEEeC-----CccCcceEEEecCCCEEEEEeC-------------C
Q 017371 183 YLPHEYCLDILEGKPHGQLLKYDPSSN-----ITTLVAD-----GFYFANGVALSRDEDYVVVCES-------------W 239 (372)
Q Consensus 183 ~~~~~~~~~~~~~~~~g~v~~~d~~t~-----~~~~~~~-----~~~~~~gi~~~~dg~~l~v~~~-------------~ 239 (372)
. .......+|++++.+.+ +.+++.+ ..+.++++++++||. ||++.. .
T Consensus 98 -~--------~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~ 167 (354)
T 3a9g_A 98 -A--------EGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSL 167 (354)
T ss_dssp -C--------GGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCC
T ss_pred -C--------CCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCC
Confidence 0 00011267999987644 2333322 245688999999996 999853 1
Q ss_pred CCeEEEEEccCCCC-----cceeeeccCCCCCCceeEEcC-CCCEEEEEecC
Q 017371 240 KFRCRKYWLKGERK-----GKLETFAENLPGAPDNINLAP-DGTFWIAIIKL 285 (372)
Q Consensus 240 ~~~i~~~~~~g~~~-----~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~ 285 (372)
..+|+|++.+|... ...+.+...+ ..|.+|++|+ +|+||+++...
T Consensus 168 ~G~I~ri~~dG~~p~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~ 218 (354)
T 3a9g_A 168 AGKILRVDEEGRPPADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGP 218 (354)
T ss_dssp SSEEEEECTTSCCCTTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCS
T ss_pred CeEEEEEcCCCCCCCCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCC
Confidence 35899999886410 0234444333 3589999999 89999999873
No 77
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.53 E-value=9e-12 Score=114.12 Aligned_cols=224 Identities=13% Similarity=0.093 Sum_probs=151.6
Q ss_pred CCCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCC-CcEEEEc-CCC-c-EEEeeecCCcc
Q 017371 88 KNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-V-ENFLSYVNGSK 159 (372)
Q Consensus 88 ~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~-~gv~~~~-~~g-~-~~l~~~~~~~~ 159 (372)
..+.+|+++ .++.|..++ +++..........+. +++++++|+ ||++... ..++.++ .++ . ...... .
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~--- 82 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE-G--- 82 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE-C---
T ss_pred CCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc-C---
Confidence 355788887 678999999 566654444445666 899999997 8888764 5688898 556 4 322221 1
Q ss_pred cccccc-eEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeC
Q 017371 160 LRFAND-VVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES 238 (372)
Q Consensus 160 ~~~~~~-l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~ 238 (372)
..+.. ++++++|+.+++... ....+.|+.+|.++++..........|++++++|||+++|+++.
T Consensus 83 -~~~~~~~~~s~dg~~l~~~~~--------------~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 83 -QSSMADVDITPDDQFAVTVTG--------------LNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp -SSCCCCEEECTTSSEEEECCC--------------SSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEE
T ss_pred -CCCccceEECCCCCEEEEecC--------------CCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEec
Confidence 23456 999999975444221 00122899999988887665555567899999999999999988
Q ss_pred CCCe-EEEEEccCCC-Ccce-eeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhcCccccccc
Q 017371 239 WKFR-CRKYWLKGER-KGKL-ETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFI 314 (372)
Q Consensus 239 ~~~~-i~~~~~~g~~-~~~~-~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~ 314 (372)
..+. |..|+++... .... .... .....|.+++++++|+ +|++...
T Consensus 148 ~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~------------------------------ 196 (331)
T 3u4y_A 148 SSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLI------------------------------ 196 (331)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETT------------------------------
T ss_pred CCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCC------------------------------
Confidence 7677 8888876421 1111 1111 1223588999999997 8888865
Q ss_pred cCCCceEEEEECC-CCcE---EEEEECCCCCeeccceeeEEE-C-CEEEEEeCCCCeEEEEeC
Q 017371 315 TLGGGAHLIHVAE-DGTI---IRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 315 ~~~~~~~v~~~~~-~g~~---~~~~~~~~g~~~~~~t~~~~~-~-g~L~igs~~~~~i~~~~~ 371 (372)
.+.|..++. +++. +..+... ..+..+... + ..||+++...+.|.++++
T Consensus 197 ----~~~v~v~d~~~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 197 ----GNSIGILETQNPENITLLNAVGTN-----NLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp ----TTEEEEEECSSTTSCEEEEEEECS-----SCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred ----CCeEEEEECCCCcccceeeeccCC-----CCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 356777775 4676 6665532 134556665 3 559999888888888875
No 78
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.51 E-value=2.7e-12 Score=117.64 Aligned_cols=216 Identities=16% Similarity=0.184 Sum_probs=139.7
Q ss_pred ccEEEcCCCcEEEEecCCeEEEEe-CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEcCCCcEEEeeecCCccc
Q 017371 82 EDASMDKNGVIYTATRDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDGVENFLSYVNGSKL 160 (372)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~i~~~~-~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g~~~l~~~~~~~~~ 160 (372)
.+++++++|.||+++.+ |++++ +|+................+. +|+||++....++++++.+|..........
T Consensus 63 ~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~--- 136 (330)
T 3hxj_A 63 CRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTIF-EDILYVTSMDGHLYAINTDGTEKWRFKTKK--- 136 (330)
T ss_dssp ECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEEEE-TTEEEEECTTSEEEEECTTSCEEEEEECSS---
T ss_pred cceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcCCC---
Confidence 46788889999999755 99998 554321111111112144454 889999987778999994472222112121
Q ss_pred ccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccCcceEEEecCCCEEEEEeCC
Q 017371 161 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYFANGVALSRDEDYVVVCESW 239 (372)
Q Consensus 161 ~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~~~gi~~~~dg~~l~v~~~~ 239 (372)
.....++++++|+||++. ..++|+++|++ ++..... ........+.+++++. +|++.
T Consensus 137 ~~~~~~~~~~~g~l~vgt------------------~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t-- 194 (330)
T 3hxj_A 137 AIYATPIVSEDGTIYVGS------------------NDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS-- 194 (330)
T ss_dssp CCCSCCEECTTSCEEEEC------------------TTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES--
T ss_pred ceeeeeEEcCCCEEEEEc------------------CCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe--
Confidence 234567888999999963 34789999998 6554322 2223345677777776 88876
Q ss_pred CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCc
Q 017371 240 KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG 319 (372)
Q Consensus 240 ~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~ 319 (372)
..|++++.++... ..+. ........+++|++|++|+++..
T Consensus 195 -~~l~~~d~~g~~~---~~~~-~~~~~~~~~~~~~~g~l~v~t~~----------------------------------- 234 (330)
T 3hxj_A 195 -DKVYAINPDGTEK---WNFY-AGYWTVTRPAISEDGTIYVTSLD----------------------------------- 234 (330)
T ss_dssp -SSEEEECTTSCEE---EEEC-CSSCCCSCCEECTTSCEEEEETT-----------------------------------
T ss_pred -CEEEEECCCCcEE---EEEc-cCCcceeceEECCCCeEEEEcCC-----------------------------------
Confidence 6799998443211 1111 12234677899999999999874
Q ss_pred eEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEe
Q 017371 320 AHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 320 ~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~ 370 (372)
+.+++++++|+.+..+....+. .+.+..+ +++||+++.. ..|.+++
T Consensus 235 ~gl~~~~~~g~~~~~~~~~~~~----~~~~~~~~~g~l~v~t~~-ggl~~~d 281 (330)
T 3hxj_A 235 GHLYAINPDGTEKWRFKTGKRI----ESSPVIGNTDTIYFGSYD-GHLYAIN 281 (330)
T ss_dssp TEEEEECTTSCEEEEEECSSCC----CSCCEECTTSCEEEECTT-CEEEEEC
T ss_pred CeEEEECCCCCEeEEeeCCCCc----cccceEcCCCeEEEecCC-CCEEEEC
Confidence 4899999999998887765432 3345555 7999999964 4666665
No 79
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.50 E-value=2.2e-11 Score=113.89 Aligned_cols=245 Identities=14% Similarity=0.084 Sum_probs=146.1
Q ss_pred CCCCccEEEcCCCc-EEEEecCCeEEEEe---CCceEEEEe--cCCCcccCeEEcCCCC-EEE--Ee-------------
Q 017371 78 VNHPEDASMDKNGV-IYTATRDGWIKRLQ---DGTWVNWKF--IDSQTLVGLTSTKEGH-LII--CD------------- 135 (372)
Q Consensus 78 ~~~p~~i~~d~~G~-l~v~~~~g~i~~~~---~g~~~~~~~--~~~~p~~gl~~d~dG~-l~v--~~------------- 135 (372)
...|..++++++|. ||+++.+ .|..|+ +|+...... ..+.|. ++++++||+ ||+ ++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR-ANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG-GGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc-cEEECCCCCEEEEEEecCCcceeccceeec
Confidence 45799999999996 8888766 788777 566543322 224578 899999998 243 32
Q ss_pred CCCcEEEEc--CCC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCC-CCe
Q 017371 136 NANGLHKVS--EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNI 210 (372)
Q Consensus 136 ~~~gv~~~~--~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-t~~ 210 (372)
....+..++ .+| ...............++++++++||+ +|+++. ..+.|+.||.+ +++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~-----------------~~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL-----------------TANKLWTHRKLASGE 179 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-----------------TTTEEEEEEECTTSC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC-----------------CCCEEEEEEECCCCC
Confidence 222344444 456 32211111101124678899999996 777654 34678888876 676
Q ss_pred EEEEe--C---CccCcceEEEecCCCEEEEEeCCCCeEEEEEccC--CCCcc-eeeeccCCC----C---------CCce
Q 017371 211 TTLVA--D---GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG--ERKGK-LETFAENLP----G---------APDN 269 (372)
Q Consensus 211 ~~~~~--~---~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g--~~~~~-~~~~~~~~~----g---------~p~~ 269 (372)
.+.+. . ....|.+++|+|||+++|+++...+.|..|+.+. .+... ...+. ..+ + .|.+
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~ 258 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP-LIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE-SSCTTCCCBCTTTSSBSEEEE
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE-cCCCCcCCccccccccccccc
Confidence 64332 1 1356888999999999999987777888876652 22110 11111 111 1 3678
Q ss_pred eE-EcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEE---EECCCCCeec
Q 017371 270 IN-LAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRN---LVDPTGQLMS 344 (372)
Q Consensus 270 i~-~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~---~~~~~g~~~~ 344 (372)
++ +++||+ ||+++...... ....-.++.++.+|++... ....... .
T Consensus 259 i~~~spdG~~l~v~~~~~~~~---------------------------~~~~i~v~~~~~~g~~~~~~~~~~~~~~~--~ 309 (365)
T 1jof_A 259 VCALTFSGKYMFASSRANKFE---------------------------LQGYIAGFKLRDCGSIEKQLFLSPTPTSG--G 309 (365)
T ss_dssp EEEECTTSSEEEEEEEESSTT---------------------------SCCEEEEEEECTTSCEEEEEEEEECSSCC--T
T ss_pred EEEECCCCCEEEEECCCCCCC---------------------------CCCeEEEEEECCCCCEEEeeeeeecCCCC--c
Confidence 99 999995 78777651000 0001245555556776542 2222111 0
Q ss_pred cceeeEE---ECCEEEEEeCCCCeEEEEeC
Q 017371 345 FVTSGLQ---VDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 345 ~~t~~~~---~~g~L~igs~~~~~i~~~~~ 371 (372)
..-.+.. ++++||+++..++.|.++++
T Consensus 310 ~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 310 HSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp TCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred ccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 1112334 46789999988888888765
No 80
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=9.5e-12 Score=115.02 Aligned_cols=187 Identities=16% Similarity=0.164 Sum_probs=122.7
Q ss_pred CCCCccEEEcCCCc-EEEEe-cCCeEEEEe---CCceEEEEe---cC---------CCcccCeEEcCCCCEEEEeCCC-c
Q 017371 78 VNHPEDASMDKNGV-IYTAT-RDGWIKRLQ---DGTWVNWKF---ID---------SQTLVGLTSTKEGHLIICDNAN-G 139 (372)
Q Consensus 78 ~~~p~~i~~d~~G~-l~v~~-~~g~i~~~~---~g~~~~~~~---~~---------~~p~~gl~~d~dG~l~v~~~~~-g 139 (372)
...|.+++++++|. ||+++ .++.|..|+ +|..+.+.. .. ..+. ++++++||++|+++... .
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~spdg~l~v~~~~~~~ 163 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH-YTDLTPDNRLAVIDLGSDK 163 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE-EEEECTTSCEEEEETTTTE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce-EEEECCCCcEEEEeCCCCE
Confidence 35799999999996 88888 678888887 455443322 11 1355 79999999999988654 4
Q ss_pred EEEEc-C-CC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeE--EEEeCCCCeEEE
Q 017371 140 LHKVS-E-DG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQL--LKYDPSSNITTL 213 (372)
Q Consensus 140 v~~~~-~-~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v--~~~d~~t~~~~~ 213 (372)
+..++ . +| ...+... .......++++++++||+ +|+++. ..+.+ +.++..+++.+.
T Consensus 164 v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~~~spdg~~l~v~~~-----------------~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVL-TMEAGFGPRHLVFSPDGQYAFLAGE-----------------LSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp EEEEEECTTSCEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEET-----------------TTTEEEEEEEETTTTEEEE
T ss_pred EEEEEECCCCcEEEeeeE-EcCCCCCCceEEECCCCCEEEEEeC-----------------CCCEEEEEEecCCCCceEE
Confidence 77777 4 56 4433221 111123577899999997 888754 23444 445554566544
Q ss_pred EeC--C-------ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCC-CCcceeeeccCCCCCCceeEEcCCCC-EEEEE
Q 017371 214 VAD--G-------FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE-RKGKLETFAENLPGAPDNINLAPDGT-FWIAI 282 (372)
Q Consensus 214 ~~~--~-------~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~ 282 (372)
+.. . ...+.+++++|||++||+++...+.|..|+++.. .......+. .....|.++++++||+ ||++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS-TEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE-CSSSCCCEEEECTTSSEEEEEE
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe-cCCCCcCeEEECCCCCEEEEEE
Confidence 321 1 1336679999999999999988888999988632 111122221 2233589999999997 77777
Q ss_pred ec
Q 017371 283 IK 284 (372)
Q Consensus 283 ~~ 284 (372)
..
T Consensus 305 ~~ 306 (347)
T 3hfq_A 305 QN 306 (347)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 81
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.50 E-value=3.9e-11 Score=112.48 Aligned_cols=230 Identities=14% Similarity=0.165 Sum_probs=162.1
Q ss_pred CCCccEEEcCCCc-EEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCC-CcEEEEc-CCC-cEE
Q 017371 79 NHPEDASMDKNGV-IYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VEN 150 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~-~gv~~~~-~~g-~~~ 150 (372)
..+.+++++++|. ||++. .++.|..++ +++..........+. +++++++|+ ||++... ..|..++ .++ ...
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ-GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc-ceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 3688999999995 66665 789999999 666555444455777 999999997 6777654 5688888 556 222
Q ss_pred EeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecC
Q 017371 151 FLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRD 229 (372)
Q Consensus 151 l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~d 229 (372)
.... . ..+..++++++|+ +|++.. ..+.|+.+|..+++..........+..+++++|
T Consensus 111 ~~~~-~----~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~d 168 (391)
T 1l0q_A 111 TVKT-G----KSPLGLALSPDGKKLYVTNN-----------------GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPD 168 (391)
T ss_dssp EEEC-S----SSEEEEEECTTSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEECCSSEEEEEECTT
T ss_pred EEeC-C----CCcceEEECCCCCEEEEEeC-----------------CCCEEEEEECCCCcEEEEEecCCCcceEEECCC
Confidence 2111 1 2467899999996 667643 467899999988887666655567789999999
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
++.+|++...++.|..+++.+.+. ...+. ....+.+++++++|+ +|++....
T Consensus 169 g~~l~~~~~~~~~v~~~d~~~~~~--~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~----------------------- 221 (391)
T 1l0q_A 169 GTKVYVANFDSMSISVIDTVTNSV--IDTVK--VEAAPSGIAVNPEGTKAYVTNVDK----------------------- 221 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEE--EEEEE--CSSEEEEEEECTTSSEEEEEEECS-----------------------
T ss_pred CCEEEEEeCCCCEEEEEECCCCeE--EEEEe--cCCCccceEECCCCCEEEEEecCc-----------------------
Confidence 999999988888999999865421 11221 233577899999995 66666410
Q ss_pred cccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE--CCEEEEEeCCCCeEEEEeCC
Q 017371 309 LFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~~ 372 (372)
..+.|..+|. +++.+..+.... .+.++... +..||++....+.|.+++++
T Consensus 222 ---------~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 222 ---------YFNTVSMIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp ---------SCCEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ---------CCCcEEEEECCCCeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 1457888885 467777665432 24556655 35788998888889888763
No 82
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.48 E-value=1.7e-12 Score=120.68 Aligned_cols=185 Identities=12% Similarity=0.147 Sum_probs=128.5
Q ss_pred CCCCCCccEEEcCCCcEEEEec------CCeEEEEe--CCc-eEEEEec------CCCcccCeEEcC-CCCEEEEeC---
Q 017371 76 GSVNHPEDASMDKNGVIYTATR------DGWIKRLQ--DGT-WVNWKFI------DSQTLVGLTSTK-EGHLIICDN--- 136 (372)
Q Consensus 76 g~~~~p~~i~~d~~G~l~v~~~------~g~i~~~~--~g~-~~~~~~~------~~~p~~gl~~d~-dG~l~v~~~--- 136 (372)
+.+..|.+|++|++|+||+.+. .++|++++ +|+ .+.+..+ ...+. ++++++ +|.+||++.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~-~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVN-DLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCC-EEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccc-eEEEecCCCEEEEEcCccC
Confidence 3477899999999999999983 47999999 576 4444322 13467 999996 478999986
Q ss_pred C-CcEEEEc-CCC-cEEEeee------------cCCccc-------------ccccceEEccCC-cEEEEeCCCCCCCcc
Q 017371 137 A-NGLHKVS-EDG-VENFLSY------------VNGSKL-------------RFANDVVEASDG-SLYFTVSSSKYLPHE 187 (372)
Q Consensus 137 ~-~gv~~~~-~~g-~~~l~~~------------~~~~~~-------------~~~~~l~~d~dG-~i~vtd~~~~~~~~~ 187 (372)
. .+|++++ .+| ...+... ..+..+ ..+++|++++|| .+|+++..
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~------- 215 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH------- 215 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS-------
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC-------
Confidence 3 6789999 556 3322211 011111 246899999999 59998652
Q ss_pred cccccccccCCCeEEEEeCC---CCe---------EEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEc-cCCCCc
Q 017371 188 YCLDILEGKPHGQLLKYDPS---SNI---------TTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWL-KGERKG 254 (372)
Q Consensus 188 ~~~~~~~~~~~g~v~~~d~~---t~~---------~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~-~g~~~~ 254 (372)
..+|++++.+ .+. ++.. .....|+|++++++|+ +|+++..+++|.+|+. +|.
T Consensus 216 ----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G~--- 280 (343)
T 2qe8_A 216 ----------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADRA--- 280 (343)
T ss_dssp ----------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTTE---
T ss_pred ----------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCCC---
Confidence 3488998742 110 1111 1234789999999986 9999999999999998 442
Q ss_pred ceeeeccC-CCCCCceeEEcCCCCEEEEEec
Q 017371 255 KLETFAEN-LPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 255 ~~~~~~~~-~~g~p~~i~~d~~G~lwva~~~ 284 (372)
...+... ....|++++++++|++||++..
T Consensus 281 -~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 281 -YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp -EEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred -EEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 2233221 1246999999999999999875
No 83
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.48 E-value=2.6e-11 Score=111.09 Aligned_cols=234 Identities=11% Similarity=0.097 Sum_probs=146.7
Q ss_pred CCCccEEEcCCCc-EEEEecC-CeEEEEe-C---CceEEEE--ecCCCcccCeEEcCCCC-EEEEeCCCc-EEEEc-CCC
Q 017371 79 NHPEDASMDKNGV-IYTATRD-GWIKRLQ-D---GTWVNWK--FIDSQTLVGLTSTKEGH-LIICDNANG-LHKVS-EDG 147 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~-g~i~~~~-~---g~~~~~~--~~~~~p~~gl~~d~dG~-l~v~~~~~g-v~~~~-~~g 147 (372)
..|.+++++++|. ||+++.+ +.|..|+ + ++.+... ...+.|. +++++++|+ ||++....+ +..++ .+|
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT-HISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS-EEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCc-EEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 4799999999996 8888854 8888877 3 4544332 2234778 999999997 777765444 66676 455
Q ss_pred -cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCC-CeEEEE------eCCc
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTLV------ADGF 218 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t-~~~~~~------~~~~ 218 (372)
........... ..+..++++++|+ +|+++. ..+.|+.+|..+ ++.... ....
T Consensus 117 ~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 177 (343)
T 1ri6_A 117 LPVGVVDVVEGL--DGCHSANISPDNRTLWVPAL-----------------KQDRICLFTVSDDGHLVAQDPAEVTTVEG 177 (343)
T ss_dssp EEEEEEEEECCC--TTBCCCEECTTSSEEEEEEG-----------------GGTEEEEEEECTTSCEEEEEEEEEECSTT
T ss_pred ccccccccccCC--CCceEEEECCCCCEEEEecC-----------------CCCEEEEEEecCCCceeeecccccccCCC
Confidence 22222222221 3578899999995 777643 356788888765 655422 1223
Q ss_pred cCcceEEEecCCCEEEEEeCCCCeEEEEEccC--CCCcceeeeccCC-----CCCCceeEEcCCCC-EEEEEecCchhHH
Q 017371 219 YFANGVALSRDEDYVVVCESWKFRCRKYWLKG--ERKGKLETFAENL-----PGAPDNINLAPDGT-FWIAIIKLDARRM 290 (372)
Q Consensus 219 ~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~-----~g~p~~i~~d~~G~-lwva~~~~~~~~~ 290 (372)
..|.+++++||++++|++....+.|..|+++. .+........... ...+..++++++|+ +|++...
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~------ 251 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT------ 251 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT------
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC------
Confidence 46778999999999999988888999999853 2221122221111 11345699999995 6666643
Q ss_pred HHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC--C-c--EEEEEECCCCCeeccceeeEEE--CCEEEEEeCCC
Q 017371 291 KILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--G-T--IIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTS 363 (372)
Q Consensus 291 ~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~--g-~--~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~~~ 363 (372)
.+.+..++.+ + + .+..+.. +. .+..+... +..||+++...
T Consensus 252 ----------------------------~~~i~v~d~~~~~~~~~~~~~~~~--~~---~~~~~~~s~dg~~l~~~~~~~ 298 (343)
T 1ri6_A 252 ----------------------------ASLITVFSVSEDGSVLSKEGFQPT--ET---QPRGFNVDHSGKYLIAAGQKS 298 (343)
T ss_dssp ----------------------------TTEEEEEEECTTSCCEEEEEEEEC--SS---SCCCEEECTTSSEEEEECTTT
T ss_pred ----------------------------CCEEEEEEEcCCCCceEEeeeecC--CC---ccceEEECCCCCEEEEecCCC
Confidence 2345555432 2 2 2333332 21 24556664 35688888777
Q ss_pred CeEEEEeC
Q 017371 364 NFIGKVQL 371 (372)
Q Consensus 364 ~~i~~~~~ 371 (372)
+.|.++++
T Consensus 299 ~~v~v~~~ 306 (343)
T 1ri6_A 299 HHISVYEI 306 (343)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEE
Confidence 88888753
No 84
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.48 E-value=3.4e-12 Score=116.57 Aligned_cols=191 Identities=13% Similarity=0.133 Sum_probs=131.2
Q ss_pred CCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCccccccccc
Q 017371 117 SQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 194 (372)
Q Consensus 117 ~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~ 194 (372)
..|. +++++++|+||+++.. ..|++++.++ ....... . ..|++|+++++|++|+++..
T Consensus 32 ~~pe-gia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~-~----~~p~gia~~~dG~l~vad~~-------------- 91 (306)
T 2p4o_A 32 TFLE-NLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATV-E----GKVSGLAFTSNGDLVATGWN-------------- 91 (306)
T ss_dssp CCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEEEEEEC-S----SEEEEEEECTTSCEEEEEEC--------------
T ss_pred CCcc-eEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeC-C----CCceeEEEcCCCcEEEEecc--------------
Confidence 4677 9999999999999854 5699999666 4333221 2 35889999999999998742
Q ss_pred ccCCCeEEEEeCCCCeEEEEeC--CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceee--------eccCCC
Q 017371 195 GKPHGQLLKYDPSSNITTLVAD--GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLET--------FAENLP 264 (372)
Q Consensus 195 ~~~~g~v~~~d~~t~~~~~~~~--~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~--------~~~~~~ 264 (372)
....+|+++|+.+++++.+.. ...+++|++..+++ .+|+++...++|++++..+.+ ..... ......
T Consensus 92 -~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~-~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 92 -ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPS-GSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp -TTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTE-EEEEEECGGGSCSSTTCCS
T ss_pred -CCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCc-EeEEEECCccccccccCCC
Confidence 012369999988888876543 45678899887654 699999888899999976421 01100 000111
Q ss_pred CCCceeEEcCCC-CEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC--CcE--EEEEECCC
Q 017371 265 GAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--GTI--IRNLVDPT 339 (372)
Q Consensus 265 g~p~~i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~--g~~--~~~~~~~~ 339 (372)
..|++| +++| ++|+++.. .+.|.+|+.+ |+. ...+..
T Consensus 169 ~~pngi--s~dg~~lyv~d~~----------------------------------~~~I~~~~~~~~g~~~~~~~~~~-- 210 (306)
T 2p4o_A 169 PAANGL--KRFGNFLYVSNTE----------------------------------KMLLLRIPVDSTDKPGEPEIFVE-- 210 (306)
T ss_dssp CSEEEE--EEETTEEEEEETT----------------------------------TTEEEEEEBCTTSCBCCCEEEEE--
T ss_pred CcCCCc--CcCCCEEEEEeCC----------------------------------CCEEEEEEeCCCCCCCccEEEec--
Confidence 257888 5555 79999976 4578888754 432 122221
Q ss_pred CCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 340 GQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 340 g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
...+..++.+ +|+||+++..++.|.+++.
T Consensus 211 ---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 211 ---QTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp ---SCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred ---cCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 1235666776 6899999999999999874
No 85
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.46 E-value=3.3e-11 Score=111.28 Aligned_cols=222 Identities=9% Similarity=0.041 Sum_probs=136.1
Q ss_pred eEEEEecCCCcccCeEEcCCCCEEEEeC-CCcEEEEc-CCC-cEEEeee--cCCcccccccceEEcc----CCcEEEEeC
Q 017371 109 WVNWKFIDSQTLVGLTSTKEGHLIICDN-ANGLHKVS-EDG-VENFLSY--VNGSKLRFANDVVEAS----DGSLYFTVS 179 (372)
Q Consensus 109 ~~~~~~~~~~p~~gl~~d~dG~l~v~~~-~~gv~~~~-~~g-~~~l~~~--~~~~~~~~~~~l~~d~----dG~i~vtd~ 179 (372)
++.+......|. +|++.+||+|||++. ...|++++ .+| .+.+... ........+.+|++++ +|.||++.+
T Consensus 24 ~~~va~gL~~P~-~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPW-GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCce-EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 345566677899 999999999999987 45588888 456 4444321 1122345778999998 489999743
Q ss_pred CCCCCCcccccccccccCCCeEEEEeCCCC--------eEEEEeC-----CccCcceEEEecCCCEEEEEe---------
Q 017371 180 SSKYLPHEYCLDILEGKPHGQLLKYDPSSN--------ITTLVAD-----GFYFANGVALSRDEDYVVVCE--------- 237 (372)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~--------~~~~~~~-----~~~~~~gi~~~~dg~~l~v~~--------- 237 (372)
. ...++|+|+..+.+ +.+++.. ..++...++|++||. |||+.
T Consensus 103 ~---------------~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~ 166 (347)
T 3das_A 103 S---------------ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLS 166 (347)
T ss_dssp C---------------SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGT
T ss_pred c---------------CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccc
Confidence 1 13468888865431 2344332 234567799999996 99984
Q ss_pred ----CCCCeEEEEEccCCCC-----cceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 238 ----SWKFRCRKYWLKGERK-----GKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 238 ----~~~~~i~~~~~~g~~~-----~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
....+|+|++.+|... ...+++...+ ..|.++++|++|+||+++..... ++
T Consensus 167 qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~-------------------~d 226 (347)
T 3das_A 167 QDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDT-------------------WD 226 (347)
T ss_dssp TCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSS-------------------CE
T ss_pred cCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCC-------------------Cc
Confidence 2357899999887410 0224454333 34899999999999999987321 11
Q ss_pred cccccccCCCceEEEEEC---CCC--cEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 309 LFSQFITLGGGAHLIHVA---EDG--TIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~---~~g--~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
.+..+.....+|+-++.. ..+ ..+..+. +. ...++.+.+.+|.+|++.+.+.+|.++.+
T Consensus 227 eln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~-~~---~~ap~G~~~~~g~~~~~~l~~~~l~~v~~ 290 (347)
T 3das_A 227 ELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS-TD---EASPSGIAYAEGSVWMAGLRGERLWRIPL 290 (347)
T ss_dssp EEEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC-TT---TCCEEEEEEETTEEEEEESTTCSEEEEEE
T ss_pred eeeEEcCCCEecCCcccCCCCCccccCCcEecC-CC---CCCCcceEEEcCceeeccccCCEEEEEEe
Confidence 111111111111100000 000 0111221 11 12467888889999999999999999876
No 86
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.46 E-value=1.1e-11 Score=110.14 Aligned_cols=194 Identities=13% Similarity=0.119 Sum_probs=135.6
Q ss_pred CcccCeEEcCCCCEEEEeCC---CcEEEEc-CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccc
Q 017371 118 QTLVGLTSTKEGHLIICDNA---NGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLD 191 (372)
Q Consensus 118 ~p~~gl~~d~dG~l~v~~~~---~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~ 191 (372)
.+. ||++++||.||+++.. +.|.++| .+| ...+. .+. ..+..+++++ +++||+++.
T Consensus 22 f~~-Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~--l~~--~~fgeGi~~~-g~~lyv~t~------------ 83 (266)
T 2iwa_A 22 FTQ-GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK--MDD--SYFGEGLTLL-NEKLYQVVW------------ 83 (266)
T ss_dssp CEE-EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE--CCT--TCCEEEEEEE-TTEEEEEET------------
T ss_pred Ccc-cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe--cCC--CcceEEEEEe-CCEEEEEEe------------
Confidence 467 9999988999998742 5699999 677 33332 121 2345577876 469999865
Q ss_pred cccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC--CCCCCce
Q 017371 192 ILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDN 269 (372)
Q Consensus 192 ~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~--~~g~p~~ 269 (372)
..+.++.||+++.+.......- .+.|..+++||+.+|+++ +.++|..++..+.+....-..... .-..|++
T Consensus 84 -----~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 84 -----LKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp -----TCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred -----cCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 5688999999887654433221 477888899999999998 678999999876432221111111 1124677
Q ss_pred eEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCC--------
Q 017371 270 INLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTG-------- 340 (372)
Q Consensus 270 i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g-------- 340 (372)
+.+. +|.+|++.+. .+.|.++|+ +|+++..+.....
T Consensus 157 le~~-dg~lyvn~~~----------------------------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~ 201 (266)
T 2iwa_A 157 LEYI-NGEVWANIWQ----------------------------------TDCIARISAKDGTLLGWILLPNLRKKLIDEG 201 (266)
T ss_dssp EEEE-TTEEEEEETT----------------------------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTT
T ss_pred EEEE-CCEEEEecCC----------------------------------CCeEEEEECCCCcEEEEEECCCccccccccc
Confidence 8777 7899999876 468999996 5899888865310
Q ss_pred -CeeccceeeEEE--CCEEEEEeCCCCeEEEEeC
Q 017371 341 -QLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 341 -~~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~ 371 (372)
.....+.++..+ ++++|++.-..+.|.++++
T Consensus 202 ~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 202 FRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 011245777776 3799999999999999885
No 87
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.44 E-value=2e-10 Score=106.72 Aligned_cols=238 Identities=16% Similarity=0.223 Sum_probs=145.8
Q ss_pred CCCCccEEEcCCCc-EEEEecC----CeEEEEe---C-CceEEEEe---cCCCcccCeEEcCCC-CEEEEeCCC-cEEEE
Q 017371 78 VNHPEDASMDKNGV-IYTATRD----GWIKRLQ---D-GTWVNWKF---IDSQTLVGLTSTKEG-HLIICDNAN-GLHKV 143 (372)
Q Consensus 78 ~~~p~~i~~d~~G~-l~v~~~~----g~i~~~~---~-g~~~~~~~---~~~~p~~gl~~d~dG-~l~v~~~~~-gv~~~ 143 (372)
...|..++++++|+ ||+++.+ |.|..|+ + |+.+.+.. ....|. ++++ +| .||+++... .+..+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~-~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC-YLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE-EEEE--CSSEEEEEETTTTEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE-EEEE--CCCEEEEEECCCCEEEEE
Confidence 46899999999996 8888754 6776554 3 66655432 345677 8888 55 588887554 36666
Q ss_pred c--CCC-cEEEee--ecCCc-------ccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEE--eCCC
Q 017371 144 S--EDG-VENFLS--YVNGS-------KLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKY--DPSS 208 (372)
Q Consensus 144 ~--~~g-~~~l~~--~~~~~-------~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~--d~~t 208 (372)
+ .++ +..+.. ...+. ....++.+++++||+ +|+++. ..+.|..| +..+
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-----------------~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL-----------------GTDQIHKFNINPNA 188 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET-----------------TTTEEEEEEECTTC
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC-----------------CCCEEEEEEEcCCC
Confidence 6 344 322111 11110 112346799999997 888764 34455555 5444
Q ss_pred C----e-E-------EEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC--CCCCCceeEEcC
Q 017371 209 N----I-T-------TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAP 274 (372)
Q Consensus 209 ~----~-~-------~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~--~~g~p~~i~~d~ 274 (372)
+ + + .........|.+++|+|||+++|+++...+.|..|++++.+.......... ....|.++++++
T Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp 268 (361)
T 3scy_A 189 NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP 268 (361)
T ss_dssp CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT
T ss_pred CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC
Confidence 3 2 2 222333456789999999999999998788999999874432222222111 112366899999
Q ss_pred CCC-EEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEEC-CCCcE--EEEEECCCCCeeccceeeE
Q 017371 275 DGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTI--IRNLVDPTGQLMSFVTSGL 350 (372)
Q Consensus 275 ~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~--~~~~~~~~g~~~~~~t~~~ 350 (372)
||+ ||++.... ...-.++.++ .+|+. +..+.. |. .+..+.
T Consensus 269 dg~~l~v~~~~~-------------------------------~~~i~v~~~~~~~g~~~~~~~~~~--g~---~~~~~~ 312 (361)
T 3scy_A 269 DGKYLYASNRLK-------------------------------ADGVAIFKVDETNGTLTKVGYQLT--GI---HPRNFI 312 (361)
T ss_dssp TSSEEEEEECSS-------------------------------SCEEEEEEECTTTCCEEEEEEEEC--SS---CCCEEE
T ss_pred CCCEEEEECCCC-------------------------------CCEEEEEEEcCCCCcEEEeeEecC--CC---CCceEE
Confidence 997 66666430 1123566666 34664 333333 32 355666
Q ss_pred EE-C-CEEEEEeCCCCeEEEEeC
Q 017371 351 QV-D-NHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 351 ~~-~-g~L~igs~~~~~i~~~~~ 371 (372)
.. + ..||+++...+.|.++++
T Consensus 313 ~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 313 ITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp ECTTSCEEEEEETTTTEEEEEEE
T ss_pred ECCCCCEEEEEECCCCCEEEEEE
Confidence 65 3 569999988899988654
No 88
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.43 E-value=7.4e-11 Score=104.26 Aligned_cols=191 Identities=12% Similarity=0.165 Sum_probs=128.7
Q ss_pred CCCCCCccEEEcCC-CcEEEE-ecCCeEEEEe-CCceEEEEe--cCCCcccCeEEcCCCCEEEEeCC-CcEEEEc--CCC
Q 017371 76 GSVNHPEDASMDKN-GVIYTA-TRDGWIKRLQ-DGTWVNWKF--IDSQTLVGLTSTKEGHLIICDNA-NGLHKVS--EDG 147 (372)
Q Consensus 76 g~~~~p~~i~~d~~-G~l~v~-~~~g~i~~~~-~g~~~~~~~--~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~--~~g 147 (372)
|....+.+|+.+++ +.||+. +.+++|++++ +|++..-.. ...++- ||+++++|.+||++.. ++++.++ .++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~E-GIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLE-TIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEE-EEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChH-HeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 44467999999975 579975 4889999999 776544332 235677 9999999999898655 5677766 344
Q ss_pred -cEEEeee-cC---CcccccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeC--CCCeEEEEeC---
Q 017371 148 -VENFLSY-VN---GSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP--SSNITTLVAD--- 216 (372)
Q Consensus 148 -~~~l~~~-~~---~~~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~--~t~~~~~~~~--- 216 (372)
+..+... .+ ........+|++|+++ ++|++... ....||.++. .+...++...
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~----------------~p~~i~~~~g~~~~~~l~i~~~~~~ 166 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK----------------NPIEVYKVNGLLSSNELHISKDKAL 166 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES----------------SSEEEEEEESTTCSSCCEEEECHHH
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc----------------CCceEEEEcccccCCceeeecchhh
Confidence 3332221 11 1222345799999887 89997532 2337888872 2233443321
Q ss_pred ----CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCC------CCCCceeEEcCCCCEEEEEec
Q 017371 217 ----GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL------PGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 217 ----~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~------~g~p~~i~~d~~G~lwva~~~ 284 (372)
.+..+.+++++|..+++|+.......|..++.+|..... ..+.... ...|.||++|++|++||++-.
T Consensus 167 ~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~-~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGE-MSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp HHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEE-EECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred ccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEE-EEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 244578999999999999999999999999987752221 1111111 125899999999999999755
No 89
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=6.4e-12 Score=115.86 Aligned_cols=175 Identities=12% Similarity=0.112 Sum_probs=124.3
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEec-----CCCcccCeEEcCCCCEEEEeCC-------CcEEEEcC
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI-----DSQTLVGLTSTKEGHLIICDNA-------NGLHKVSE 145 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~-----~~~p~~gl~~d~dG~l~v~~~~-------~gv~~~~~ 145 (372)
.+.+++++++|++|+++.+ +|++++ +|+++.+... ...+. ++++|++|++|+++.. .+|++++
T Consensus 91 ~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~- 167 (326)
T 2ghs_A 91 MGSALAKISDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSN-DGRMHPSGALWIGTMGRKAETGAGSIYHVA- 167 (326)
T ss_dssp CEEEEEEEETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEE-EEEECTTSCEEEEEEETTCCTTCEEEEEEE-
T ss_pred cceEEEEeCCCeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCC-CEEECCCCCEEEEeCCCcCCCCceEEEEEe-
Confidence 6788999999999999854 599999 6777665432 12467 8999999999998742 3689998
Q ss_pred CC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCC--CC-eE---EEEe--
Q 017371 146 DG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS--SN-IT---TLVA-- 215 (372)
Q Consensus 146 ~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~--t~-~~---~~~~-- 215 (372)
+| .+.+... ...++++++++||+ +|+++. ..++|+++|.+ ++ +. +.+.
T Consensus 168 ~g~~~~~~~~-----~~~~~~i~~s~dg~~lyv~~~-----------------~~~~I~~~d~~~~~Gl~~~~~~~~~~~ 225 (326)
T 2ghs_A 168 KGKVTKLFAD-----ISIPNSICFSPDGTTGYFVDT-----------------KVNRLMRVPLDARTGLPTGKAEVFIDS 225 (326)
T ss_dssp TTEEEEEEEE-----ESSEEEEEECTTSCEEEEEET-----------------TTCEEEEEEBCTTTCCBSSCCEEEEEC
T ss_pred CCcEEEeeCC-----CcccCCeEEcCCCCEEEEEEC-----------------CCCEEEEEEcccccCCcccCceEEEEC
Confidence 67 5544322 23578999999995 899865 35689999864 55 32 2222
Q ss_pred -CCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEc-CCC-CEEEEEec
Q 017371 216 -DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLA-PDG-TFWIAIIK 284 (372)
Q Consensus 216 -~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d-~~G-~lwva~~~ 284 (372)
.....|.+++++++|+ +|++....++|.+|+.++.. ...+. .....|.+++++ +++ .|||++..
T Consensus 226 ~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~~---~~~i~-~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 226 TGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGNH---IARYE-VPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCCE---EEEEE-CSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCCE---EEEEE-CCCCCcEEEEEecCCCCEEEEEecC
Confidence 1234688999999997 99998777899999885432 12221 112247789987 675 69999876
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.42 E-value=2.5e-10 Score=104.43 Aligned_cols=228 Identities=12% Similarity=0.086 Sum_probs=141.7
Q ss_pred CCcEEEEe-cCCeEEEEe-C--CceEEE--EecCCCcccCeEEcCCCC-EEEEeCC-CcEEEEc-C--CC-cEEEeeecC
Q 017371 89 NGVIYTAT-RDGWIKRLQ-D--GTWVNW--KFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-E--DG-VENFLSYVN 156 (372)
Q Consensus 89 ~G~l~v~~-~~g~i~~~~-~--g~~~~~--~~~~~~p~~gl~~d~dG~-l~v~~~~-~gv~~~~-~--~g-~~~l~~~~~ 156 (372)
+..+|+++ .++.|..|+ + ++.+.. ......+. +++++++|+ ||++... ..+..++ . +| .+.+... .
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~ 81 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQ-PMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES-A 81 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCC-CEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE-E
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCc-eEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc-c
Confidence 34688885 688899887 3 544332 23445678 999999997 7887765 4566655 3 45 4444322 1
Q ss_pred CcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC---eEEEEeCCccCcceEEEecCCCE
Q 017371 157 GSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN---ITTLVADGFYFANGVALSRDEDY 232 (372)
Q Consensus 157 ~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~---~~~~~~~~~~~~~gi~~~~dg~~ 232 (372)
.. ..+..++++++|+ +|++.. ..+.|..+|.+++ +..........+.++++++|+++
T Consensus 82 ~~--~~~~~~~~s~dg~~l~~~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 142 (343)
T 1ri6_A 82 LP--GSLTHISTDHQGQFVFVGSY-----------------NAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRT 142 (343)
T ss_dssp CS--SCCSEEEECTTSSEEEEEET-----------------TTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSE
T ss_pred cC--CCCcEEEEcCCCCEEEEEec-----------------CCCeEEEEECCCCccccccccccCCCCceEEEECCCCCE
Confidence 11 2678999999997 777643 3566777776323 33333455566889999999999
Q ss_pred EEEEeCCCCeEEEEEccC-CCCccee--eeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 233 VVVCESWKFRCRKYWLKG-ERKGKLE--TFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 233 l~v~~~~~~~i~~~~~~g-~~~~~~~--~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
+|+++...+.|..|++.. .+..... .........|.+++++++|+ +|++...
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~------------------------ 198 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL------------------------ 198 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT------------------------
T ss_pred EEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC------------------------
Confidence 999987778899999865 3222211 22212223588899999997 7777644
Q ss_pred cccccccCCCceEEEEECC---CCcE--EEEEEC-CCC-CeeccceeeEEE--CCEEEEEeCCCCeEEEEeC
Q 017371 309 LFSQFITLGGGAHLIHVAE---DGTI--IRNLVD-PTG-QLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~~---~g~~--~~~~~~-~~g-~~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~ 371 (372)
.+.+..++. .|+. ...+.. +.+ .....+..+... +..||++....+.|.++++
T Consensus 199 ----------~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~ 260 (343)
T 1ri6_A 199 ----------NSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSV 260 (343)
T ss_dssp ----------TTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ----------CCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEE
Confidence 234555543 2433 223321 222 112234456665 3478888877788887765
No 91
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.41 E-value=4e-12 Score=122.51 Aligned_cols=170 Identities=14% Similarity=0.139 Sum_probs=118.8
Q ss_pred CceEecCCCCCCCccEEEcCCCcEEEEecCC-eEEEEe--CCceEEEEe---------cCCCcccCeEEcC----CCCEE
Q 017371 69 DFIKVGEGSVNHPEDASMDKNGVIYTATRDG-WIKRLQ--DGTWVNWKF---------IDSQTLVGLTSTK----EGHLI 132 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~g-~i~~~~--~g~~~~~~~---------~~~~p~~gl~~d~----dG~l~ 132 (372)
.++++.++ +..|.+|+++++|+||+++..| +|++++ +|+.+.+.. ..+.++ ||+++| +|.||
T Consensus 18 ~~~~~a~~-l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gll-gia~~Pdf~~~g~lY 95 (454)
T 1cru_A 18 DKKVILSN-LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLL-GFAFHPDFKNNPYIY 95 (454)
T ss_dssp CEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEE-EEEECTTTTTSCEEE
T ss_pred EEEEEECC-CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCcee-EEEECCCcCcCCEEE
Confidence 56677776 8899999999999999999765 799998 466655432 124566 999998 68899
Q ss_pred EEeCC-------------CcEEEEc-CC--C----cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCC-Ccccc--
Q 017371 133 ICDNA-------------NGLHKVS-ED--G----VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYL-PHEYC-- 189 (372)
Q Consensus 133 v~~~~-------------~gv~~~~-~~--g----~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~-~~~~~-- 189 (372)
|+... ..|++++ .+ + .+++....+....+..++|++++||+|||+....-.. ....+
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSC
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccc
Confidence 99742 3588877 22 2 2344444444445788999999999999986431100 00000
Q ss_pred ------------cccccccCCCeEEEEeCCCC-----------eEEEEeCCccCcceEEEecCCCEEEEEeCCCC
Q 017371 190 ------------LDILEGKPHGQLLKYDPSSN-----------ITTLVADGFYFANGVALSRDEDYVVVCESWKF 241 (372)
Q Consensus 190 ------------~~~~~~~~~g~v~~~d~~t~-----------~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~ 241 (372)
.........|+|+|+++++. ..++++.++.+|.|++|+++|+ ||+++.+.+
T Consensus 176 ~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~~~d~g~~ 249 (454)
T 1cru_A 176 NQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LLQSEQGPN 249 (454)
T ss_dssp CCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EEEEEECSS
T ss_pred cccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EEEEecCCC
Confidence 00001123689999999855 4677889999999999999876 999997543
No 92
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.40 E-value=1.2e-10 Score=106.19 Aligned_cols=220 Identities=14% Similarity=0.057 Sum_probs=144.3
Q ss_pred CCccEEEcCCC-cEEEEe-cCCeEEEEe--CCceEEEEecCC------CcccCeEEcCCC-CEEEEe------------C
Q 017371 80 HPEDASMDKNG-VIYTAT-RDGWIKRLQ--DGTWVNWKFIDS------QTLVGLTSTKEG-HLIICD------------N 136 (372)
Q Consensus 80 ~p~~i~~d~~G-~l~v~~-~~g~i~~~~--~g~~~~~~~~~~------~p~~gl~~d~dG-~l~v~~------------~ 136 (372)
.|.+++++++| .+|++. .++.|..++ +++......... .+. +++++++| .||+++ .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF-GAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT-CEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc-ceEECCCCCEEEEEeccccccccccccc
Confidence 49999999999 578877 578999999 565443222222 678 99999999 577775 2
Q ss_pred CCcEEEEc-CCC-c-EEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEE
Q 017371 137 ANGLHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 212 (372)
Q Consensus 137 ~~gv~~~~-~~g-~-~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~ 212 (372)
...+..++ .++ . ..+.. + ..+.+++++++|+ ||++ ++.|+.+|.++++..
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~---~---~~~~~~~~s~dg~~l~~~--------------------~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA---P---RQITMLAWARDGSKLYGL--------------------GRDLHVMDPEAGTLV 167 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC---C---SSCCCEEECTTSSCEEEE--------------------SSSEEEEETTTTEEE
T ss_pred CceEEEEECCCCcEEEEEeC---C---CCcceeEECCCCCEEEEe--------------------CCeEEEEECCCCcEe
Confidence 35688888 555 2 22211 1 2467899999996 7774 346999999888776
Q ss_pred EEeCCccCcceEEEecCCCEEEEEeCCCC-----------------------eEEEEEccCCCCcceeeeccCCCCCCce
Q 017371 213 LVADGFYFANGVALSRDEDYVVVCESWKF-----------------------RCRKYWLKGERKGKLETFAENLPGAPDN 269 (372)
Q Consensus 213 ~~~~~~~~~~gi~~~~dg~~l~v~~~~~~-----------------------~i~~~~~~g~~~~~~~~~~~~~~g~p~~ 269 (372)
........+..+++++|++.+|++..... .|+.+++.+.+.. ...+. .....|.+
T Consensus 168 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~-~~~~~~~~ 245 (337)
T 1pby_B 168 EDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR-IMDVFYFS 245 (337)
T ss_dssp EEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE-ECSSCEEE
T ss_pred eeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC-CCCCceee
Confidence 54443333345678999988887765444 3567777654322 11111 22235778
Q ss_pred eEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC-CcEEEEEECCCCCeeccce
Q 017371 270 INLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVT 347 (372)
Q Consensus 270 i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t 347 (372)
++++++|+ +|++ .. .|..+|.+ ++.+..+.... .+.
T Consensus 246 ~~~s~dg~~l~~~-~~------------------------------------~v~~~d~~~~~~~~~~~~~~-----~~~ 283 (337)
T 1pby_B 246 TAVNPAKTRAFGA-YN------------------------------------VLESFDLEKNASIKRVPLPH-----SYY 283 (337)
T ss_dssp EEECTTSSEEEEE-ES------------------------------------EEEEEETTTTEEEEEEECSS-----CCC
T ss_pred EEECCCCCEEEEe-CC------------------------------------eEEEEECCCCcCcceecCCC-----cee
Confidence 99999996 6665 22 57778754 66766665432 245
Q ss_pred eeEEE--CCEEEEEeCCCCeEEEEeC
Q 017371 348 SGLQV--DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 348 ~~~~~--~g~L~igs~~~~~i~~~~~ 371 (372)
++... +..||+++ ..+.|.++++
T Consensus 284 ~~~~s~dg~~l~~~~-~~~~i~v~d~ 308 (337)
T 1pby_B 284 SVNVSTDGSTVWLGG-ALGDLAAYDA 308 (337)
T ss_dssp EEEECTTSCEEEEES-BSSEEEEEET
T ss_pred eEEECCCCCEEEEEc-CCCcEEEEEC
Confidence 55554 35688875 4677888875
No 93
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.39 E-value=3.9e-10 Score=111.28 Aligned_cols=231 Identities=8% Similarity=-0.050 Sum_probs=153.0
Q ss_pred EEcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCCCcEEEEcC--CCcEEEeeecCCc
Q 017371 85 SMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVSE--DGVENFLSYVNGS 158 (372)
Q Consensus 85 ~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~gv~~~~~--~g~~~l~~~~~~~ 158 (372)
+++++|.+|++. .++.|..|| .++..........+. ++++++||+ ||+++.+..|..+|. ...+.+.....+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g- 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVH-ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG- 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccc-eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-
Confidence 478889999988 688999999 565543333333478 999999995 788877666888884 222222221122
Q ss_pred ccccccceEEcc----CCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc------------cCc
Q 017371 159 KLRFANDVVEAS----DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF------------YFA 221 (372)
Q Consensus 159 ~~~~~~~l~~d~----dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~------------~~~ 221 (372)
..+.++++++ ||+ +|+++. ..+.|..+|..+++........ ..+
T Consensus 222 --~~p~~va~sp~~~~dg~~l~v~~~-----------------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v 282 (543)
T 1nir_A 222 --IEARSVESSKFKGYEDRYTIAGAY-----------------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 282 (543)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEE-----------------ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE
T ss_pred --CCcceEEeCCCcCCCCCEEEEEEc-----------------cCCeEEEEeccccccceeecccCcccCccccccCCce
Confidence 3578999999 885 677643 3567888998887765443221 134
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHH
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIK 300 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r 300 (372)
.+++++++++.+|++....+.|+.++....+......+. ...+|.+++++++|+ ++++...
T Consensus 283 ~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~--~~~~~~~~~~spdg~~l~va~~~---------------- 344 (543)
T 1nir_A 283 AAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG--AAPFLHDGGWDSSHRYFMTAANN---------------- 344 (543)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE--CCSSCCCEEECTTSCEEEEEEGG----------------
T ss_pred EEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec--cCcCccCceECCCCCEEEEEecC----------------
Confidence 578999999999999998999999998654322211221 234689999999998 5666654
Q ss_pred HHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEE-ECCEEEEEeC-CCCeEEEEeCC
Q 017371 301 HVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISL-TSNFIGKVQLS 372 (372)
Q Consensus 301 ~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~-~~g~L~igs~-~~~~i~~~~~~ 372 (372)
.+.|..+|. +|+++..+.............+.. +++.+|+.+. ..+.|.+++++
T Consensus 345 ------------------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~ 401 (543)
T 1nir_A 345 ------------------SNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTD 401 (543)
T ss_dssp ------------------GTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred ------------------CCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeC
Confidence 346777884 588887776421111111122222 2488998874 56889998864
No 94
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.37 E-value=7e-10 Score=103.85 Aligned_cols=214 Identities=16% Similarity=0.191 Sum_probs=145.9
Q ss_pred cEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCC-CcEEEEc-CCC-c-EEEeeecCCccccc
Q 017371 91 VIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-V-ENFLSYVNGSKLRF 162 (372)
Q Consensus 91 ~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~-~gv~~~~-~~g-~-~~l~~~~~~~~~~~ 162 (372)
.+|++. .++.|..++ +++..........+. +++++++|+ ||++... ..|..++ .++ . ..+.. . ..
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~--~----~~ 75 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPM-GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA--G----SS 75 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC--S----SS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcc-eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC--C----CC
Confidence 466665 688899999 566544444455677 999999997 5676533 4588888 566 2 22211 1 25
Q ss_pred ccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCCC
Q 017371 163 ANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKF 241 (372)
Q Consensus 163 ~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~ 241 (372)
+..++++++|+ ||++.. ..+.|+.+|..+++..........+.++++++|++.+|++...++
T Consensus 76 v~~~~~spdg~~l~~~~~-----------------~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNM-----------------ASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp EEEEEECTTSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT
T ss_pred ccceEECCCCCEEEEEEC-----------------CCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCC
Confidence 67899999996 777643 457899999998887666555566789999999999999988888
Q ss_pred eEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCce
Q 017371 242 RCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGA 320 (372)
Q Consensus 242 ~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~ 320 (372)
.|+.+++.+.+. ...+. ....|..++++++|+ +|++... .+
T Consensus 139 ~v~~~d~~~~~~--~~~~~--~~~~~~~~~~~~dg~~l~~~~~~----------------------------------~~ 180 (391)
T 1l0q_A 139 TVSVINTVTKAV--INTVS--VGRSPKGIAVTPDGTKVYVANFD----------------------------------SM 180 (391)
T ss_dssp EEEEEETTTTEE--EEEEE--CCSSEEEEEECTTSSEEEEEETT----------------------------------TT
T ss_pred EEEEEECCCCcE--EEEEe--cCCCcceEEECCCCCEEEEEeCC----------------------------------CC
Confidence 999999865321 11221 223478899999995 6676654 45
Q ss_pred EEEEECCC-CcEEEEEECCCCCeeccceeeEEE--CCEEEEEeC--CCCeEEEEeC
Q 017371 321 HLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISL--TSNFIGKVQL 371 (372)
Q Consensus 321 ~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~--~~~~i~~~~~ 371 (372)
.|..+|.+ ++.+..+.... .+.++... +..||+++. ....|.++++
T Consensus 181 ~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVEA-----APSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEEEEETTTTEEEEEEECSS-----EEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred EEEEEECCCCeEEEEEecCC-----CccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 67777754 55555554321 34555554 357888876 5677777765
No 95
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.33 E-value=8.5e-11 Score=109.62 Aligned_cols=165 Identities=13% Similarity=0.104 Sum_probs=107.1
Q ss_pred ceEEEEecCCCcccCeEEcCCCC-EEEEeCCCcEEEEcCCC-cE-EEeee--cCCcccccccceEEcc----CCcEEEEe
Q 017371 108 TWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVSEDG-VE-NFLSY--VNGSKLRFANDVVEAS----DGSLYFTV 178 (372)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~gv~~~~~~g-~~-~l~~~--~~~~~~~~~~~l~~d~----dG~i~vtd 178 (372)
+++.+......|. +|+++++|+ |||++....|++++.+| .. .+... ........+.+|++++ +|.||+++
T Consensus 9 ~~~~va~~l~~P~-~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 9 NVEVLQDKLDHPW-ALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp EEEEEEEEESSEE-EEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred EEEEEECCCCCcE-EEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 4556666677899 999999999 99999766688888666 32 22211 1111123567999998 58999986
Q ss_pred CCCCCCCcccccccccccCCCeEEEEeCCCC-----eEEEEeCC-------ccCcceEEEecCCCEEEEEeCC-------
Q 017371 179 SSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-----ITTLVADG-------FYFANGVALSRDEDYVVVCESW------- 239 (372)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~-----~~~~~~~~-------~~~~~gi~~~~dg~~l~v~~~~------- 239 (372)
.... ..+....+|++++.+.+ ..+++... .+.++++++++|| .||++...
T Consensus 88 ~~~~----------~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~ 156 (353)
T 2g8s_A 88 SEVG----------DDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTA 156 (353)
T ss_dssp EEEC----------SSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGG
T ss_pred eCCC----------CCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCcc
Confidence 4200 00001347888865432 23334322 3457899999999 69999632
Q ss_pred ------CCeEEEEEccCCCC----------cceeeeccCCCCCCceeEEcC-CCCEEEEEecC
Q 017371 240 ------KFRCRKYWLKGERK----------GKLETFAENLPGAPDNINLAP-DGTFWIAIIKL 285 (372)
Q Consensus 240 ------~~~i~~~~~~g~~~----------~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~ 285 (372)
..+|+|++.+|... ...+.+...+ ..|.++++|+ +|+||+++...
T Consensus 157 q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 157 QDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp GCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECS
T ss_pred CCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCC
Confidence 35899999987410 0223343222 2489999999 89999999873
No 96
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.32 E-value=1.3e-10 Score=111.77 Aligned_cols=168 Identities=16% Similarity=0.242 Sum_probs=110.0
Q ss_pred CceEecCCCCCCCccEEEcCCCc--EEEEecCCeEEEEe-CCce--EEE-------Eec-----CCCcccCeEEcCC---
Q 017371 69 DFIKVGEGSVNHPEDASMDKNGV--IYTATRDGWIKRLQ-DGTW--VNW-------KFI-----DSQTLVGLTSTKE--- 128 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~G~--l~v~~~~g~i~~~~-~g~~--~~~-------~~~-----~~~p~~gl~~d~d--- 128 (372)
.++++.+| |..|..|++.++|. |||+...|+|+.++ +|.. +.+ ... .+..+ ||+++|+
T Consensus 5 ~v~~va~g-L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gll-gia~~P~f~~ 82 (463)
T 2wg3_C 5 CIQEVVSG-LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLL-SLAFHPNYKK 82 (463)
T ss_dssp EEEEEEEE-ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEE-EEEECTTHHH
T ss_pred EEEEeccC-CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcce-eeEeCCCCcC
Confidence 35566666 88999999999985 99999999999998 5532 111 111 23456 9999985
Q ss_pred -CCEEEEeCC-------------CcEEEEc-CC--------C-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCC
Q 017371 129 -GHLIICDNA-------------NGLHKVS-ED--------G-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYL 184 (372)
Q Consensus 129 -G~l~v~~~~-------------~gv~~~~-~~--------g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~ 184 (372)
|.|||+... ..|.++. .+ . .+++.........+....|++++||+|||+....-..
T Consensus 83 n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~ 162 (463)
T 2wg3_C 83 NGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMIT 162 (463)
T ss_dssp HCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCC
T ss_pred CCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCC
Confidence 889998431 2466665 21 1 2344432222334667789999999999986531100
Q ss_pred CcccccccccccCCCeEEEEeCCCC--------------------eEEEEeCCccCcceEEEecCC-----C-EEEEEeC
Q 017371 185 PHEYCLDILEGKPHGQLLKYDPSSN--------------------ITTLVADGFYFANGVALSRDE-----D-YVVVCES 238 (372)
Q Consensus 185 ~~~~~~~~~~~~~~g~v~~~d~~t~--------------------~~~~~~~~~~~~~gi~~~~dg-----~-~l~v~~~ 238 (372)
..............|.|+|+|+++. ..++++.++.+|.|++|+++. + ++|.+|.
T Consensus 163 ~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 163 LDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred CCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 0000000011234689999999853 346788999999999999972 2 5777775
No 97
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.31 E-value=1.3e-09 Score=103.46 Aligned_cols=248 Identities=10% Similarity=0.067 Sum_probs=161.4
Q ss_pred CCccEEEcCCCcEEEEe-cCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCC-EEEEeCC-CcEEEEc-CCC-cEEE
Q 017371 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VENF 151 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~-l~v~~~~-~gv~~~~-~~g-~~~l 151 (372)
...++++.++|.+|++. .++.|..|+ +++. ..+......+. +++++++|+ +|++... ..+..++ .++ ....
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK-ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE-EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee-EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 34568888899888877 689999999 4443 33433445677 999999986 5566643 4588888 566 2211
Q ss_pred eeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCC
Q 017371 152 LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDE 230 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg 230 (372)
. .. ...+..++++++|+ +|++...... ....++.|+.+|..+++..........+.++++++++
T Consensus 250 ~---~~--~~~~~~~~~~~~g~~l~~~~~~~~~----------~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 314 (433)
T 3bws_A 250 T---DK--IGLPRGLLLSKDGKELYIAQFSASN----------QESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTE 314 (433)
T ss_dssp C---CC--CSEEEEEEECTTSSEEEEEEEESCT----------TCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSST
T ss_pred e---cC--CCCceEEEEcCCCCEEEEEECCCCc----------cccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCC
Confidence 1 11 12477899999995 5555321000 0013678999999888765554333467789999999
Q ss_pred CEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHHhcCcc
Q 017371 231 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 309 (372)
Q Consensus 231 ~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~ 309 (372)
+.+|++...++.|..|++++.+.. ..+. ....+..++++++|+ +|++....... .
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~~~~~--~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~--------------------~ 370 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKEKKVQ--KSIP--VFDKPNTIALSPDGKYLYVSCRGPNHP--------------------T 370 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEE--EEEE--CSSSEEEEEECTTSSEEEEEECCCCCT--------------------T
T ss_pred CEEEEEecCCCEEEEEECCCCcEE--EEec--CCCCCCeEEEcCCCCEEEEEecCCCcc--------------------c
Confidence 999999888899999998753211 1221 234578999999996 77776541100 0
Q ss_pred ccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE--CCEEEEEeCCCCeEEEEeCC
Q 017371 310 FSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 310 ~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~~ 372 (372)
-..+......+.|..+|. +++.+..+.... .+.++... +..|++++...+.|.+++++
T Consensus 371 ~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 371 EGYLKKGLVLGKVYVIDTTTDTVKEFWEAGN-----QPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp TCTTSCCSSCCEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred cccccccccceEEEEEECCCCcEEEEecCCC-----CCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 000111233568888885 577777776521 35667765 35788888778899988764
No 98
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.31 E-value=2.9e-09 Score=99.39 Aligned_cols=184 Identities=11% Similarity=0.068 Sum_probs=107.3
Q ss_pred cEEEEec--CCeEEEEe----CCceEEEEe----cCCCcccCeEEcCCCC-EEEEeCCCcEEEEc-C-CC-cEEEeee-c
Q 017371 91 VIYTATR--DGWIKRLQ----DGTWVNWKF----IDSQTLVGLTSTKEGH-LIICDNANGLHKVS-E-DG-VENFLSY-V 155 (372)
Q Consensus 91 ~l~v~~~--~g~i~~~~----~g~~~~~~~----~~~~p~~gl~~d~dG~-l~v~~~~~gv~~~~-~-~g-~~~l~~~-~ 155 (372)
.+|+|+. .+.|+.++ +|+.+.+.. ....|. ++++++||+ ||+++.. .+..++ . +| ...+... .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~-~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPIS-WMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCS-EEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCc-EEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeec
Confidence 5788884 25677654 566655433 223677 999999997 7787765 777777 4 67 4333221 1
Q ss_pred CCcccccccceEEccCCc-EEEEeCC-CCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-----CCccCcceEEEec
Q 017371 156 NGSKLRFANDVVEASDGS-LYFTVSS-SKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-----DGFYFANGVALSR 228 (372)
Q Consensus 156 ~~~~~~~~~~l~~d~dG~-i~vtd~~-~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-----~~~~~~~gi~~~~ 228 (372)
.+ .+..+++++||+ +|+...+ .++. .+............+|.++.+ ++..... .....+.+++++|
T Consensus 82 ~g----~~~~~~~spdg~~l~~~~~~~~~~~--~~~~~~~~~~g~v~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~sp 154 (365)
T 1jof_A 82 GG----HPRANDADTNTRAIFLLAAKQPPYA--VYANPFYKFAGYGNVFSVSET-GKLEKNVQNYEYQENTGIHGMVFDP 154 (365)
T ss_dssp CS----SGGGGCTTSCCEEEEEEECSSTTCC--EEEEEESSSCCEEEEEEECTT-CCEEEEEEEEECCTTCCEEEEEECT
T ss_pred CC----CCccEEECCCCCEEEEEEecCCcce--eccceeecCCceEEEEccCCC-CcCcceEeeEEeCCCCcceEEEECC
Confidence 12 366799999998 2432111 0000 000000001122344555433 5443222 2345788999999
Q ss_pred CCCEEEEEeCCCCeEEEEEcc-CCCCcceeeecc-CCCCCCceeEEcCCCC-EEEEEe
Q 017371 229 DEDYVVVCESWKFRCRKYWLK-GERKGKLETFAE-NLPGAPDNINLAPDGT-FWIAII 283 (372)
Q Consensus 229 dg~~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~-~~~g~p~~i~~d~~G~-lwva~~ 283 (372)
||+++|+++.+.++|+.|+++ +.+......+.. .....|.++++++||+ +|++..
T Consensus 155 dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 155 TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 999999999888899999986 333222122210 1123589999999995 777764
No 99
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.31 E-value=2.8e-10 Score=101.09 Aligned_cols=152 Identities=11% Similarity=0.032 Sum_probs=108.5
Q ss_pred CCCCccEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCC-CEEEEeCCCcEEEEc-CCC--cEE
Q 017371 78 VNHPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDNANGLHKVS-EDG--VEN 150 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG-~l~v~~~~~gv~~~~-~~g--~~~ 150 (372)
-..+++++.+ +++||+++ .++.+..+| +.+...-.... .+. |..+.+|| +||+++....|..+| .+. ...
T Consensus 65 ~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~-g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~ 141 (266)
T 2iwa_A 65 SYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKD-GWGLATDGKILYGSDGTSILYEIDPHTFKLIKK 141 (266)
T ss_dssp TCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEEECC-SSS-CCEEEECSSSEEEECSSSEEEEECTTTCCEEEE
T ss_pred CcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEEECC-CCC-eEEEEECCCEEEEECCCCeEEEEECCCCcEEEE
Confidence 3467788887 46999999 688999999 45433322233 333 44444454 799998656799999 443 333
Q ss_pred EeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC--Cc----------
Q 017371 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GF---------- 218 (372)
Q Consensus 151 l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~--~~---------- 218 (372)
+.-...+.+...+|.+.+. +|++|++.. ..+.|.++|++++++..... ++
T Consensus 142 I~Vg~~~~p~~~~nele~~-dg~lyvn~~-----------------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 142 HNVKYNGHRVIRLNELEYI-NGEVWANIW-----------------QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEET-----------------TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred EEECCCCcccccceeEEEE-CCEEEEecC-----------------CCCeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 3333234455578888887 899999764 35789999999998765442 22
Q ss_pred --cCcceEEEecCCCEEEEEeCCCCeEEEEEccC
Q 017371 219 --YFANGVALSRDEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 219 --~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g 250 (372)
..||||+++++++.+||+.....+|+.+++..
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 35799999999999999999889999998753
No 100
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.30 E-value=7.9e-10 Score=102.66 Aligned_cols=185 Identities=16% Similarity=0.184 Sum_probs=116.5
Q ss_pred CCCccEEEcCCCcEEEEe-cCCeEEEEe---CCceEE----EEecC----------CCcccCeEEcCCCC-EEEEeCC-C
Q 017371 79 NHPEDASMDKNGVIYTAT-RDGWIKRLQ---DGTWVN----WKFID----------SQTLVGLTSTKEGH-LIICDNA-N 138 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~-~~g~i~~~~---~g~~~~----~~~~~----------~~p~~gl~~d~dG~-l~v~~~~-~ 138 (372)
..|..+++ .+..||+++ .++.|..++ ++.+.. ..... ..+. +++++|||+ ||+++.. .
T Consensus 100 ~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~ 177 (361)
T 3scy_A 100 ADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLH-CVRITPDGKYLLADDLGTD 177 (361)
T ss_dssp SCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEE-EEEECTTSSEEEEEETTTT
T ss_pred CCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcce-EEEECCCCCEEEEEeCCCC
Confidence 47888888 344688888 678888887 343221 11111 1235 799999997 8888764 3
Q ss_pred cEEEEc-C--CC------cEEE--eeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeC
Q 017371 139 GLHKVS-E--DG------VENF--LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 206 (372)
Q Consensus 139 gv~~~~-~--~g------~~~l--~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 206 (372)
.+..++ . .+ +... ...........+.++++++||+ +|+++. ..+.|..+|.
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~-----------------~~~~v~v~~~ 240 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE-----------------IGGTVIAFRY 240 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET-----------------TTCEEEEEEE
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC-----------------CCCeEEEEEe
Confidence 455554 2 22 1111 0011111124577899999996 777653 3567888877
Q ss_pred CCCeEEEEeC------CccCcceEEEecCCCEEEEEeCC-CCeEEEEEcc--CCCCcceeeeccCCCCCCceeEEcCCCC
Q 017371 207 SSNITTLVAD------GFYFANGVALSRDEDYVVVCESW-KFRCRKYWLK--GERKGKLETFAENLPGAPDNINLAPDGT 277 (372)
Q Consensus 207 ~t~~~~~~~~------~~~~~~gi~~~~dg~~l~v~~~~-~~~i~~~~~~--g~~~~~~~~~~~~~~g~p~~i~~d~~G~ 277 (372)
++++.+.+.. ....+.+++++|||++||+++.. .+.|..|+++ +.+......+. . ...|.++++++||+
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~ 318 (361)
T 3scy_A 241 ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGK 318 (361)
T ss_dssp ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSC
T ss_pred cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCC
Confidence 6676654321 22346689999999999999987 7788888875 22222222222 2 34689999999997
Q ss_pred -EEEEEec
Q 017371 278 -FWIAIIK 284 (372)
Q Consensus 278 -lwva~~~ 284 (372)
||++...
T Consensus 319 ~l~~~~~~ 326 (361)
T 3scy_A 319 YLLVACRD 326 (361)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 7777643
No 101
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.27 E-value=1.9e-09 Score=102.27 Aligned_cols=219 Identities=12% Similarity=0.082 Sum_probs=148.5
Q ss_pred CCccEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEEe------cCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC-
Q 017371 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKF------IDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG- 147 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~------~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g- 147 (372)
.|.++++++++.+|++. .++.|..++ +++...... ..+... ++++.++|++|++... ..+..++ .++
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE-TISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE-EEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee-EEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 57789999988888887 567899999 565543221 112345 7899999999988765 4577788 555
Q ss_pred -cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEE
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVA 225 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~ 225 (372)
...+.. . ...+..++++++|+ +|++.. ..+.|+.+|..+++..........+.+++
T Consensus 203 ~~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 260 (433)
T 3bws_A 203 YKATVDL--T---GKWSKILLYDPIRDLVYCSNW-----------------ISEDISVIDRKTKLEIRKTDKIGLPRGLL 260 (433)
T ss_dssp EEEEEEC--S---SSSEEEEEEETTTTEEEEEET-----------------TTTEEEEEETTTTEEEEECCCCSEEEEEE
T ss_pred EEEEEcC--C---CCCeeEEEEcCCCCEEEEEec-----------------CCCcEEEEECCCCcEEEEecCCCCceEEE
Confidence 333321 1 13567899999986 556543 46789999998887766555555688999
Q ss_pred EecCCCEEEEEeC-------CCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcch
Q 017371 226 LSRDEDYVVVCES-------WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSK 297 (372)
Q Consensus 226 ~~~dg~~l~v~~~-------~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~ 297 (372)
++|+++.++++.. .++.|+.+++.+.+... .. ..++.+.+++++++|+ +|++...
T Consensus 261 ~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~--~~--~~~~~~~~~~~~~~g~~l~~~~~~------------- 323 (433)
T 3bws_A 261 LSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLID--TI--GPPGNKRHIVSGNTENKIYVSDMC------------- 323 (433)
T ss_dssp ECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEE--EE--EEEECEEEEEECSSTTEEEEEETT-------------
T ss_pred EcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEe--ec--cCCCCcceEEECCCCCEEEEEecC-------------
Confidence 9999998998874 34578889886542211 11 1123477899999995 7777655
Q ss_pred hHHHHHHhcCccccccccCCCceEEEEECCC-CcEEEEEECCCCCeeccceeeEEE--CCEEEEEeCCCC
Q 017371 298 LIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSN 364 (372)
Q Consensus 298 ~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~~~~ 364 (372)
.+.+..++.+ ++.+..+.... .+.++... +..||+++...+
T Consensus 324 ---------------------~~~v~v~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~~~~~~ 367 (433)
T 3bws_A 324 ---------------------CSKIEVYDLKEKKVQKSIPVFD-----KPNTIALSPDGKYLYVSCRGPN 367 (433)
T ss_dssp ---------------------TTEEEEEETTTTEEEEEEECSS-----SEEEEEECTTSSEEEEEECCCC
T ss_pred ---------------------CCEEEEEECCCCcEEEEecCCC-----CCCeEEEcCCCCEEEEEecCCC
Confidence 4577778754 66666665322 35566665 346888887654
No 102
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.26 E-value=2.8e-09 Score=105.17 Aligned_cols=234 Identities=15% Similarity=0.104 Sum_probs=149.1
Q ss_pred CCccEEEcCCC-cEEEEecCCeEEEEe-C-C--ceEEEEecCCCcccCeEEcC----CCC-EEEEeC-CCcEEEEc-CCC
Q 017371 80 HPEDASMDKNG-VIYTATRDGWIKRLQ-D-G--TWVNWKFIDSQTLVGLTSTK----EGH-LIICDN-ANGLHKVS-EDG 147 (372)
Q Consensus 80 ~p~~i~~d~~G-~l~v~~~~g~i~~~~-~-g--~~~~~~~~~~~p~~gl~~d~----dG~-l~v~~~-~~gv~~~~-~~g 147 (372)
.|++++++++| .||+++.++.|..|| . . +.......+..|. ++++++ ||+ ||+++. ...+..+| .++
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~-~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR-SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc-eEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 38899999998 688998889999999 3 3 3222223456788 999999 986 777764 35688888 555
Q ss_pred --cEEEeee---cCCc---ccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE--EeC
Q 017371 148 --VENFLSY---VNGS---KLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL--VAD 216 (372)
Q Consensus 148 --~~~l~~~---~~~~---~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~--~~~ 216 (372)
+..+... ..+. +...+..+++++++. +|++.. ..+.|+.+|..+.+... ...
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~-----------------~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK-----------------ETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET-----------------TTTEEEEEECTTSSSCEEEEEE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC-----------------CCCeEEEEEecCCCcceeEEec
Confidence 4433321 0110 112456788888775 555432 57899999987543211 122
Q ss_pred CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCC---ceeE-EcCC-CCEEEEEecCchhHHH
Q 017371 217 GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAP---DNIN-LAPD-GTFWIAIIKLDARRMK 291 (372)
Q Consensus 217 ~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p---~~i~-~d~~-G~lwva~~~~~~~~~~ 291 (372)
.-.++.+++|+|||+++|++....+.|..++..+.+... .+ .. ...| .+.. .+++ |.+|++....
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~--~i-~~-g~~ph~g~g~~~~~p~~g~~~~s~~~~------ 391 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA--LV-DV-GKTPHPGRGANFVHPKYGPVWSTSHLG------ 391 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE--EE-EC-SSSBCCTTCEEEEETTTEEEEEEEBSS------
T ss_pred cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE--ee-cc-CCCCCCCCCcccCCCCCccEEEeccCC------
Confidence 345788999999999999998888899999986543221 11 11 1112 2333 4666 7899887521
Q ss_pred HhhcchhHHHHHHhcCccccccccCCCceEEEEEC--CC------CcEEEEEECCCCCeeccceeeEEE--CCEEEEEeC
Q 017371 292 ILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA--ED------GTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISL 361 (372)
Q Consensus 292 ~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~--~~------g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~ 361 (372)
.+.|..++ +. ++.++.+....+. +..+..+ +.+||+++.
T Consensus 392 ---------------------------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~----~~~v~~~pdg~~l~v~~~ 440 (543)
T 1nir_A 392 ---------------------------DGSISLIGTDPKNHPQYAWKKVAELQGQGGG----SLFIKTHPKSSHLYVDTT 440 (543)
T ss_dssp ---------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC----CCCEECCTTCCEEEECCT
T ss_pred ---------------------------CceEEEEEeCCCCCchhcCeEEEEEEcCCCC----ceEEEcCCCCCcEEEecC
Confidence 23455554 31 6888888765432 2334443 578999874
Q ss_pred C------CCeEEEEeCC
Q 017371 362 T------SNFIGKVQLS 372 (372)
Q Consensus 362 ~------~~~i~~~~~~ 372 (372)
. .+.|.+++++
T Consensus 441 ~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 441 FNPDARISQSVAVFDLK 457 (543)
T ss_dssp TCSSHHHHTCEEEEETT
T ss_pred CCCCcccCceEEEEECC
Confidence 2 4489998863
No 103
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.26 E-value=9.8e-10 Score=96.68 Aligned_cols=148 Identities=21% Similarity=0.190 Sum_probs=107.4
Q ss_pred CccEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC--cEEEeee
Q 017371 81 PEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSY 154 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g--~~~l~~~ 154 (372)
.++++.+ +++||+.+ .++.++.+| +.+...-....+... |++.| .+.||+++....|..+| .+. ...+.-.
T Consensus 89 geGit~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~-glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 89 GEGISDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW-GLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp EEEEEEE-TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC-CEEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECE
T ss_pred eeEEEEe-CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce-EEecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEec
Confidence 4778887 45999999 688999999 455433223345667 88876 36899998666799999 444 3333333
Q ss_pred cCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC--c-----------cCc
Q 017371 155 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--F-----------YFA 221 (372)
Q Consensus 155 ~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--~-----------~~~ 221 (372)
..+.+...+|.+.+. +|+||+... ..+.|+++|+++|++....+- + ..+
T Consensus 166 ~~g~~~~~lNELe~~-~G~lyan~w-----------------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vl 227 (262)
T 3nol_A 166 AHGEELPELNELEWV-DGEIFANVW-----------------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVL 227 (262)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEET-----------------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCE
T ss_pred cCCccccccceeEEE-CCEEEEEEc-----------------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCce
Confidence 345555677778776 899999764 356899999999998664422 2 357
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEcc
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLK 249 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~ 249 (372)
||||++|+++.|||+.-.-.+++.+.+.
T Consensus 228 NGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 228 NGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp EEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 9999999999999999877888887753
No 104
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.22 E-value=1.1e-09 Score=96.32 Aligned_cols=148 Identities=18% Similarity=0.203 Sum_probs=107.8
Q ss_pred CCccEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC--cEEEee
Q 017371 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLS 153 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g--~~~l~~ 153 (372)
..|+++.+. ++||+.+ .++.++.+| +.+...-....+.+. |++.| .++||+++....+..+| .+. ...+.-
T Consensus 97 FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw-GLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 97 FAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW-GLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp CEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-CEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-EEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 347788874 5999999 688999999 555433233345677 88876 35899998666799999 444 333333
Q ss_pred ecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC--------------cc
Q 017371 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--------------FY 219 (372)
Q Consensus 154 ~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--------------~~ 219 (372)
...+.+..++|.+.+. +|+||+... ..+.|.++|+++|++....+- ..
T Consensus 174 ~~~g~~v~~lNeLe~~-dG~lyanvw-----------------~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~ 235 (268)
T 3nok_A 174 KLRGQPVELINELECA-NGVIYANIW-----------------HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEA 235 (268)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEET-----------------TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTC
T ss_pred CCCCcccccccccEEe-CCEEEEEEC-----------------CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCC
Confidence 3345556677888876 889999764 356899999999987664321 13
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEc
Q 017371 220 FANGVALSRDEDYVVVCESWKFRCRKYWL 248 (372)
Q Consensus 220 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~ 248 (372)
.+||||++++++.|||+.-.-.+++.+.+
T Consensus 236 vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 236 VLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp CEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 57999999999999999887778887765
No 105
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.22 E-value=2.3e-09 Score=94.36 Aligned_cols=189 Identities=11% Similarity=0.107 Sum_probs=127.4
Q ss_pred CeEEcCCCCEEEEeCCC---cEEEEc-CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccc
Q 017371 122 GLTSTKEGHLIICDNAN---GLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEG 195 (372)
Q Consensus 122 gl~~d~dG~l~v~~~~~---gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~ 195 (372)
||.++ +|.||+++... .|.++| .+| ...+. .+. ..+..+++++ +++||+.+.
T Consensus 47 GL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~--l~~--~~FgeGit~~-g~~ly~ltw---------------- 104 (262)
T 3nol_A 47 GFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE--LGK--RYFGEGISDW-KDKIVGLTW---------------- 104 (262)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE--CCT--TCCEEEEEEE-TTEEEEEES----------------
T ss_pred eEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe--cCC--ccceeEEEEe-CCEEEEEEe----------------
Confidence 89998 78999997553 488899 677 33332 121 2344567775 469999864
Q ss_pred cCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcce-eeeccCCC-CCCceeEEc
Q 017371 196 KPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKL-ETFAENLP-GAPDNINLA 273 (372)
Q Consensus 196 ~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~-~~~~~~~~-g~p~~i~~d 273 (372)
..+.+++||+++.+...-... .+.|..+++|++.||+++ +.++|+.+|..+.+.... .+-....+ ..++.+...
T Consensus 105 -~~~~v~v~D~~t~~~~~ti~~--~~eG~glt~dg~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~ 180 (262)
T 3nol_A 105 -KNGLGFVWNIRNLRQVRSFNY--DGEGWGLTHNDQYLIMSD-GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV 180 (262)
T ss_dssp -SSSEEEEEETTTCCEEEEEEC--SSCCCCEEECSSCEEECC-SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE
T ss_pred -eCCEEEEEECccCcEEEEEEC--CCCceEEecCCCEEEEEC-CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE
Confidence 467899999988775543322 235666677888899998 478999999875432221 11111111 234456665
Q ss_pred CCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCC--------Ceec
Q 017371 274 PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTG--------QLMS 344 (372)
Q Consensus 274 ~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g--------~~~~ 344 (372)
+|.+|+..+. .+.|.++|+ +|+++..+....- ...+
T Consensus 181 -~G~lyan~w~----------------------------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~ 225 (262)
T 3nol_A 181 -DGEIFANVWQ----------------------------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPID 225 (262)
T ss_dssp -TTEEEEEETT----------------------------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCC
T ss_pred -CCEEEEEEcc----------------------------------CCeEEEEECCCCcEEEEEECCcCccccccccCcCC
Confidence 7899999876 468999996 5999998876421 1123
Q ss_pred cceeeEEE--CCEEEEEeCCCCeEEEEeC
Q 017371 345 FVTSGLQV--DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 345 ~~t~~~~~--~g~L~igs~~~~~i~~~~~ 371 (372)
...+++.+ .++||+..-.=+.+-.++|
T Consensus 226 vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 226 VLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp CEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred ceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 45677877 4899999998888877764
No 106
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.20 E-value=3.4e-09 Score=92.45 Aligned_cols=149 Identities=18% Similarity=0.102 Sum_probs=108.4
Q ss_pred CCccEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC--cEEEee
Q 017371 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLS 153 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g--~~~l~~ 153 (372)
..++++.+ +++||+.+ .++.++.+| +.+...-....+.+. |++.| .++||+++....|..+| .+. ...+.-
T Consensus 66 fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw-glt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 66 FGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW-ALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp CEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC-EEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce-EEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 45778887 46899999 688999999 454333233345667 77765 46899999767799999 444 333433
Q ss_pred ecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC--------------Ccc
Q 017371 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--------------GFY 219 (372)
Q Consensus 154 ~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~--------------~~~ 219 (372)
...+.+...+|.+... +|+||+... .+..|.++|+++|++.-..+ ...
T Consensus 143 ~~~g~~~~~lNeLe~~-~G~lyanvw-----------------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~ 204 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWV-NGELLANVW-----------------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTND 204 (243)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEET-----------------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSS
T ss_pred ccCCcccccceeeEEe-CCEEEEEEC-----------------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCC
Confidence 3345556677777765 899998754 35689999999998766432 123
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEcc
Q 017371 220 FANGVALSRDEDYVVVCESWKFRCRKYWLK 249 (372)
Q Consensus 220 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~ 249 (372)
.+||||++++++.|||+.-.-.+++.+.+.
T Consensus 205 vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 205 VLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp CEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 579999999999999999877888888764
No 107
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.19 E-value=1.3e-08 Score=100.55 Aligned_cols=228 Identities=9% Similarity=-0.055 Sum_probs=148.3
Q ss_pred EcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCCCcEEEEc-C--CCcEEEeeecCCc
Q 017371 86 MDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-E--DGVENFLSYVNGS 158 (372)
Q Consensus 86 ~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~gv~~~~-~--~g~~~l~~~~~~~ 158 (372)
.|+++.+|++. .++.|..+| ++++......+..|. ++++++||+ +|+++....|..+| . ++ +.+.....+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G- 239 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVH-ISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIG- 239 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECC-
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCcc-ceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecC-
Confidence 45566788888 688999999 566554445566788 999999996 78887656799999 4 33 222222122
Q ss_pred ccccccceEEc----cCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC-Cc-----------cCc
Q 017371 159 KLRFANDVVEA----SDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GF-----------YFA 221 (372)
Q Consensus 159 ~~~~~~~l~~d----~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~-~~-----------~~~ 221 (372)
..|.+++++ +|| .+|+++. ..+.|..+|..+.+...... .. ...
T Consensus 240 --~~P~~ia~s~~~~pDGk~l~v~n~-----------------~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rv 300 (567)
T 1qks_A 240 --SEARSIETSKMEGWEDKYAIAGAY-----------------WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV 300 (567)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEE-----------------ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCE
T ss_pred --CCCceeEEccccCCCCCEEEEEEc-----------------cCCeEEEEECCCCcEEEEEeccccccccccccCCCce
Confidence 357899999 588 5888754 35778899988776554322 10 123
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHH
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIK 300 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r 300 (372)
.++..++++..++++....+.|+.++....+.-....+ ....+|.++.+|++|+ +|+++..
T Consensus 301 a~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~---------------- 362 (567)
T 1qks_A 301 AAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANA---------------- 362 (567)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGG----------------
T ss_pred EEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCC----------------
Confidence 46778888888888888888999998764321111111 1233688999999997 5666655
Q ss_pred HHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeE-EE--CCEEEEEe-CCCCeEEEEeCC
Q 017371 301 HVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGL-QV--DNHLYVIS-LTSNFIGKVQLS 372 (372)
Q Consensus 301 ~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~-~~--~g~L~igs-~~~~~i~~~~~~ 372 (372)
.+.|..+|. +++++..+..- |..-.....+. .+ .+.+|+.+ ...+.|.+++.+
T Consensus 363 ------------------sn~V~ViD~~t~kl~~~i~vg-g~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 363 ------------------RNKLVVIDTKEGKLVAIEDTG-GQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp ------------------GTEEEEEETTTTEEEEEEECS-SSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred ------------------CCeEEEEECCCCcEEEEEecc-CcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 457788884 57777666430 22111111222 23 47899866 455899999764
No 108
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.18 E-value=1.3e-08 Score=93.31 Aligned_cols=216 Identities=17% Similarity=0.070 Sum_probs=122.9
Q ss_pred CCCccEEEcCCCc-EEEEe-cCCeEEEEe--CCceEEEEecCC-------CcccCeEEcCCCC-EEEEeCC---------
Q 017371 79 NHPEDASMDKNGV-IYTAT-RDGWIKRLQ--DGTWVNWKFIDS-------QTLVGLTSTKEGH-LIICDNA--------- 137 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~-~~g~i~~~~--~g~~~~~~~~~~-------~p~~gl~~d~dG~-l~v~~~~--------- 137 (372)
..|++++++++|. +|++. .++.|+.++ +++......... .+. ++++++||+ ||++...
T Consensus 43 ~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~~~ 121 (349)
T 1jmx_B 43 FGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY-SFAISPDGKEVYATVNPTQRLNDHYV 121 (349)
T ss_dssp CSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSS-CEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred CCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccccc-ceEECCCCCEEEEEcccccccccccc
Confidence 3699999999985 78887 678999999 565443222222 267 999999996 6666532
Q ss_pred ---CcEEEEc-CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCC-CCCCccc--cccccccc-------------
Q 017371 138 ---NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSS-KYLPHEY--CLDILEGK------------- 196 (372)
Q Consensus 138 ---~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~-~~~~~~~--~~~~~~~~------------- 196 (372)
..+..++ .++ ........... ..+..+++++||++|++.... .+..... ...+....
T Consensus 122 ~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 122 VKPPRLEVFSTADGLEAKPVRTFPMP--RQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp ECCCEEEEEEGGGGGGBCCSEEEECC--SSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred cCCCeEEEEECCCccccceeeeccCC--CcccceeECCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCcccee
Confidence 4578888 554 21111111111 246788899999988753210 0000000 00000000
Q ss_pred -------------------------------CCCeEEEEeCCCCeEEEEe--CCccCcceEEEec-CCCEEEEEeCCCCe
Q 017371 197 -------------------------------PHGQLLKYDPSSNITTLVA--DGFYFANGVALSR-DEDYVVVCESWKFR 242 (372)
Q Consensus 197 -------------------------------~~g~v~~~d~~t~~~~~~~--~~~~~~~gi~~~~-dg~~l~v~~~~~~~ 242 (372)
....++.+|..+++++.+. .....+.+++++| |++.+|++ .+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~ 276 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNR 276 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCe
Confidence 0001112333333332221 1112455778889 99999988 568
Q ss_pred EEEEEccCCCCcceeeeccCCCCCCceeEEcCCC-CEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceE
Q 017371 243 CRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAH 321 (372)
Q Consensus 243 i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~ 321 (372)
|+.|++.+.+.. ..+. ....|.+++++++| .||++ .. .+.
T Consensus 277 v~~~d~~~~~~~--~~~~--~~~~~~~~~~s~dg~~l~~~-~~----------------------------------~~~ 317 (349)
T 1jmx_B 277 LAKYDLKQRKLI--KAAN--LDHTYYCVAFDKKGDKLYLG-GT----------------------------------FND 317 (349)
T ss_dssp EEEEETTTTEEE--EEEE--CSSCCCEEEECSSSSCEEEE-SB----------------------------------SSE
T ss_pred EEEEECccCeEE--EEEc--CCCCccceEECCCCCEEEEe-cC----------------------------------CCe
Confidence 999998653211 1221 23357899999998 57774 33 357
Q ss_pred EEEECC-CCcEEEEEECCC
Q 017371 322 LIHVAE-DGTIIRNLVDPT 339 (372)
Q Consensus 322 v~~~~~-~g~~~~~~~~~~ 339 (372)
|..+|. +++.+..+..+.
T Consensus 318 v~v~d~~~~~~~~~~~~~~ 336 (349)
T 1jmx_B 318 LAVFNPDTLEKVKNIKLPG 336 (349)
T ss_dssp EEEEETTTTEEEEEEECSS
T ss_pred EEEEeccccceeeeeecCC
Confidence 787885 477888877763
No 109
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.18 E-value=7.1e-09 Score=98.56 Aligned_cols=231 Identities=11% Similarity=0.042 Sum_probs=131.1
Q ss_pred cEEEEecC-----CeEEEEe--CCceEEEEecCCCcccCeEEcCCC-CEEEEeC----------CCcEEEEc-CCC--cE
Q 017371 91 VIYTATRD-----GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDN----------ANGLHKVS-EDG--VE 149 (372)
Q Consensus 91 ~l~v~~~~-----g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG-~l~v~~~----------~~gv~~~~-~~g--~~ 149 (372)
.+|+++.. +.|..+| ++++..-...+..| ++++++|| .|||++. ...|..+| .++ ..
T Consensus 86 ~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~ 163 (426)
T 3c75_H 86 RVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA 163 (426)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE
T ss_pred EEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEE
Confidence 69999842 6899999 56655444455556 89999999 5999974 23488899 555 33
Q ss_pred EEeeecCC-cc---cccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC----ccC
Q 017371 150 NFLSYVNG-SK---LRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----FYF 220 (372)
Q Consensus 150 ~l~~~~~~-~~---~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~----~~~ 220 (372)
.+.. ++ .+ ...|.++++++|| ++|+++.. ..+.|..+|..++++...... ...
T Consensus 164 ~I~v--~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----------------~~~~VsVID~~t~kvv~~I~v~g~~~~~ 225 (426)
T 3c75_H 164 DIEL--PDAPRFLVGTYQWMNALTPDNKNLLFYQFS----------------PAPAVGVVDLEGKTFDRMLDVPDCYHIF 225 (426)
T ss_dssp EEEE--TTCCCCCBSCCGGGSEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEEEE
T ss_pred EEEC--CCccccccCCCcceEEEcCCCCEEEEEecC----------------CCCeEEEEECCCCeEEEEEEcCCceeec
Confidence 3321 21 11 2468899999999 69998642 133455555544443221110 001
Q ss_pred c-----------------------------------------ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeee
Q 017371 221 A-----------------------------------------NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETF 259 (372)
Q Consensus 221 ~-----------------------------------------~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~ 259 (372)
| ..+.++++++.+|+... .++|+.++..+....-...+
T Consensus 226 p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~ 304 (426)
T 3c75_H 226 PASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPI 304 (426)
T ss_dssp EEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCE
T ss_pred cCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeee
Confidence 1 12334555555555543 34566666643321100011
Q ss_pred c---cC--CCC-CCce---eEEcCCC-CEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-C
Q 017371 260 A---EN--LPG-APDN---INLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-D 328 (372)
Q Consensus 260 ~---~~--~~g-~p~~---i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~ 328 (372)
. .. ..+ .|.+ ++++++| ++||+........ + ....+.|..+|. .
T Consensus 305 ~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gt----h---------------------k~~s~~VsVID~~T 359 (426)
T 3c75_H 305 EALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWK----H---------------------KAASRFVVVLNAET 359 (426)
T ss_dssp ESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTC----T---------------------TSCEEEEEEEETTT
T ss_pred eeccccccccccccCCceeeEEcCCCCEEEEEeccccccc----c---------------------cCCCCEEEEEECCC
Confidence 0 00 000 1333 7888886 6888875310000 0 001357888985 5
Q ss_pred CcEEEEEECCCCCeeccceeeEEE--CC-EEEEEeCCCCeEEEEeCC
Q 017371 329 GTIIRNLVDPTGQLMSFVTSGLQV--DN-HLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 329 g~~~~~~~~~~g~~~~~~t~~~~~--~g-~L~igs~~~~~i~~~~~~ 372 (372)
++++..+.... .+.++.+. +. +||+.+..++.|.++|+.
T Consensus 360 ~kvv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 360 GERINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp CCEEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred CeEEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 78888876532 24555554 45 788888889999999863
No 110
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.17 E-value=6.1e-09 Score=98.99 Aligned_cols=222 Identities=14% Similarity=0.110 Sum_probs=133.3
Q ss_pred ceEecCCCCCCCccEEEcCCC-cEEEEec----------CCeEEEEe--CCceE-EEEec-------CCCcccCeEEcCC
Q 017371 70 FIKVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTWV-NWKFI-------DSQTLVGLTSTKE 128 (372)
Q Consensus 70 ~~~~~~g~~~~p~~i~~d~~G-~l~v~~~----------~g~i~~~~--~g~~~-~~~~~-------~~~p~~gl~~d~d 128 (372)
+..+..|. .| ++++++|| .||+++. ++.|..+| ++++. .+... +..|. ++++++|
T Consensus 112 v~~I~vG~--~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~-~~~~spD 187 (426)
T 3c75_H 112 LGMTDGGF--LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQW-MNALTPD 187 (426)
T ss_dssp EEEEEECS--SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GSEECTT
T ss_pred EEEEECCC--CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcc-eEEEcCC
Confidence 44455563 68 99999988 6999973 56799999 55543 33322 35789 9999999
Q ss_pred C-CEEEEeCC--CcEEEEc-CCC--cEEEeeecCCcccccccc----eEEccCCcEEEEeCCC-C--------CCCccc-
Q 017371 129 G-HLIICDNA--NGLHKVS-EDG--VENFLSYVNGSKLRFAND----VVEASDGSLYFTVSSS-K--------YLPHEY- 188 (372)
Q Consensus 129 G-~l~v~~~~--~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~----l~~d~dG~i~vtd~~~-~--------~~~~~~- 188 (372)
| .|||++.. ..|..+| .++ +..+.. ++.....+.+ +++.+||++.+.+... + +.....
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p 265 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--PDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDEL 265 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSC
T ss_pred CCEEEEEecCCCCeEEEEECCCCeEEEEEEc--CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCc
Confidence 9 58998743 4699999 565 333321 1111112222 6677788655444321 1 111000
Q ss_pred -c---------cccccccCCCeEEEEeCCCCeEEEEeC-------C---ccCcce---EEEecCCCEEEEEeCC------
Q 017371 189 -C---------LDILEGKPHGQLLKYDPSSNITTLVAD-------G---FYFANG---VALSRDEDYVVVCESW------ 239 (372)
Q Consensus 189 -~---------~~~~~~~~~g~v~~~d~~t~~~~~~~~-------~---~~~~~g---i~~~~dg~~l~v~~~~------ 239 (372)
. ..+......+.|+.+|..+++.+.+.. . ...|.| +++++|++++|+++..
T Consensus 266 ~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gth 345 (426)
T 3c75_H 266 LINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKH 345 (426)
T ss_dssp BCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCT
T ss_pred eeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccc
Confidence 0 000111124567888876554433211 0 012444 8999999999998742
Q ss_pred ---CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEe-cCchhHHHHhhcchhHHHHHHhcCccccccc
Q 017371 240 ---KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII-KLDARRMKILNSSKLIKHVLAAYPKLFSQFI 314 (372)
Q Consensus 240 ---~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~-~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~ 314 (372)
.+.|..+|....+... .+. .++.|.++++++||+ +|+... .
T Consensus 346 k~~s~~VsVID~~T~kvv~--~I~--vg~~P~gia~spDg~~~lyv~n~~------------------------------ 391 (426)
T 3c75_H 346 KAASRFVVVLNAETGERIN--KIE--LGHEIDSINVSQDAEPLLYALSAG------------------------------ 391 (426)
T ss_dssp TSCEEEEEEEETTTCCEEE--EEE--EEEEECEEEECCSSSCEEEEEETT------------------------------
T ss_pred cCCCCEEEEEECCCCeEEE--EEE--CCCCcCeEEEccCCCEEEEEEcCC------------------------------
Confidence 3479999986543221 221 223599999999998 555444 4
Q ss_pred cCCCceEEEEECC-CCcEEEEE
Q 017371 315 TLGGGAHLIHVAE-DGTIIRNL 335 (372)
Q Consensus 315 ~~~~~~~v~~~~~-~g~~~~~~ 335 (372)
.+.|..+|. +++++..+
T Consensus 392 ----s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 392 ----TQTLHIYDAATGEELRSV 409 (426)
T ss_dssp ----TTEEEEEETTTCCEEEEE
T ss_pred ----CCeEEEEECCCCCEEEEe
Confidence 468899994 58888776
No 111
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.17 E-value=3.7e-09 Score=93.06 Aligned_cols=188 Identities=14% Similarity=0.102 Sum_probs=126.6
Q ss_pred CeEEcCCCCEEEEeCCC-cEEEEc-CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccC
Q 017371 122 GLTSTKEGHLIICDNAN-GLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKP 197 (372)
Q Consensus 122 gl~~d~dG~l~v~~~~~-gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~ 197 (372)
||.++ ++.||++.... .|.++| ++| ...+ .+.. .+..+++++ .++||+.+. .
T Consensus 59 GL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~--~FgeGit~~-g~~Ly~ltw-----------------~ 114 (268)
T 3nok_A 59 GLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME---RLGN--IFAEGLASD-GERLYQLTW-----------------T 114 (268)
T ss_dssp EEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE---ECTT--CCEEEEEEC-SSCEEEEES-----------------S
T ss_pred eEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE---CCCC--cceeEEEEe-CCEEEEEEc-----------------c
Confidence 88887 58999998764 377788 677 4433 2221 244567775 459999864 4
Q ss_pred CCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC--CCCCCceeEEcCC
Q 017371 198 HGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPD 275 (372)
Q Consensus 198 ~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~--~~g~p~~i~~d~~ 275 (372)
.+.++.||+++.+...-... .+.|..+++|++.||+++ +.++|+.++..+.+....-..... .-.+++.+... +
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp SCEEEEEETTTTEEEEEEEC--SSCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CCEEEEEECCcCcEEEEEeC--CCceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C
Confidence 67899999988776544332 245566667889999998 588999999876432221111111 11134556655 8
Q ss_pred CCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCC---------CCeecc
Q 017371 276 GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPT---------GQLMSF 345 (372)
Q Consensus 276 G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~---------g~~~~~ 345 (372)
|.+|+..+. ...|.++|+ +|+++..+.... ....+.
T Consensus 191 G~lyanvw~----------------------------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~v 236 (268)
T 3nok_A 191 GVIYANIWH----------------------------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAV 236 (268)
T ss_dssp TEEEEEETT----------------------------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCC
T ss_pred CEEEEEECC----------------------------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCc
Confidence 899998876 468999997 589988876421 011234
Q ss_pred ceeeEEE--CCEEEEEeCCCCeEEEEeC
Q 017371 346 VTSGLQV--DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 346 ~t~~~~~--~g~L~igs~~~~~i~~~~~ 371 (372)
..+++.+ .++||+....=+.+-.++|
T Consensus 237 lNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 237 LNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred eEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 5677776 4899999998888888775
No 112
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.15 E-value=1.4e-08 Score=92.94 Aligned_cols=158 Identities=10% Similarity=0.004 Sum_probs=95.8
Q ss_pred cEEEcCCCcEEEEe-cCCeEEEEe--CCceEEEEecCC--CcccCeEEcCCCC-EEEEeCC-CcEEEEc-CCC-cE-EEe
Q 017371 83 DASMDKNGVIYTAT-RDGWIKRLQ--DGTWVNWKFIDS--QTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG-VE-NFL 152 (372)
Q Consensus 83 ~i~~d~~G~l~v~~-~~g~i~~~~--~g~~~~~~~~~~--~p~~gl~~d~dG~-l~v~~~~-~gv~~~~-~~g-~~-~l~ 152 (372)
++++.+++.+|++. .++.|+.+| +++......... .+. +++++++|+ +|++... ..|..++ .++ .. .+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG-TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc-eeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 44566788888876 789999999 565543333333 578 999999996 7888654 4588888 556 32 222
Q ss_pred eec-CCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEE---EEeCCccCcceEEEe
Q 017371 153 SYV-NGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT---LVADGFYFANGVALS 227 (372)
Q Consensus 153 ~~~-~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~---~~~~~~~~~~gi~~~ 227 (372)
... ++.....+.++++++||+ +|++.......... .....+.|+.+|.++++.. ........+.+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~------~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 156 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH------YVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA 156 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSC------EEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEEC
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccc------cccCCCeEEEEECCCccccceeeeccCCCcccceeEC
Confidence 110 111124578999999995 66654210000000 0012468999998764321 112222346788899
Q ss_pred cCCCEEEEEeCCCCeEEEEEccCC
Q 017371 228 RDEDYVVVCESWKFRCRKYWLKGE 251 (372)
Q Consensus 228 ~dg~~l~v~~~~~~~i~~~~~~g~ 251 (372)
+||+ +|++. ..|+.+++.+.
T Consensus 157 ~dg~-l~~~~---~~i~~~d~~~~ 176 (349)
T 1jmx_B 157 DDGS-LYVAG---PDIYKMDVKTG 176 (349)
T ss_dssp TTSC-EEEES---SSEEEECTTTC
T ss_pred CCCc-EEEcc---CcEEEEeCCCC
Confidence 9999 88853 23888887643
No 113
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.13 E-value=2.1e-08 Score=88.53 Aligned_cols=195 Identities=11% Similarity=0.101 Sum_probs=128.7
Q ss_pred CCcccCeEEcCC-CCEEEE-eCCCcEEEEcCCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCccccccc
Q 017371 117 SQTLVGLTSTKE-GHLIIC-DNANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDI 192 (372)
Q Consensus 117 ~~p~~gl~~d~d-G~l~v~-~~~~gv~~~~~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~ 192 (372)
+.+- ||+++++ ++||++ +....|++++.+| .+.+.. .+ ..-+.+|+++.+|.+|+++.
T Consensus 27 ~~lS-Gla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l--~g--~~D~EGIa~~~~g~~~vs~E------------- 88 (255)
T 3qqz_A 27 NNIS-SLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPL--DF--VKDLETIEYIGDNQFVISDE------------- 88 (255)
T ss_dssp SCEE-EEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEEC--SS--CSSEEEEEECSTTEEEEEET-------------
T ss_pred cCcc-eeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEec--CC--CCChHHeEEeCCCEEEEEEC-------------
Confidence 3455 9999986 469975 5445699999557 343321 22 24577999999999999864
Q ss_pred ccccCCCeEEEEeCCC-CeEE---EEeCCc-cCc-----ceEEEecCCCEEEEEeCCCC-eEEEEEccCCCC-cceeee-
Q 017371 193 LEGKPHGQLLKYDPSS-NITT---LVADGF-YFA-----NGVALSRDEDYVVVCESWKF-RCRKYWLKGERK-GKLETF- 259 (372)
Q Consensus 193 ~~~~~~g~v~~~d~~t-~~~~---~~~~~~-~~~-----~gi~~~~dg~~l~v~~~~~~-~i~~~~~~g~~~-~~~~~~- 259 (372)
..++++.++... ++.. .....+ ..+ .|++++++++.||++.-... +|+.++ |-.. ......
T Consensus 89 ----~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~ 162 (255)
T 3qqz_A 89 ----RDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISK 162 (255)
T ss_dssp ----TTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEE
T ss_pred ----CCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeec
Confidence 346777765332 2211 111111 123 59999999988999775544 777776 2110 111111
Q ss_pred ----ccC-CCCCCceeEEcCC-CCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCCCcEEE
Q 017371 260 ----AEN-LPGAPDNINLAPD-GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIR 333 (372)
Q Consensus 260 ----~~~-~~g~p~~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~ 333 (372)
... .-.-+.++++|+. |++||-... ...++++|.+|+++.
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~----------------------------------s~~L~~~d~~g~~~~ 208 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHE----------------------------------SRALQEVTLVGEVIG 208 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETT----------------------------------TTEEEEECTTCCEEE
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECC----------------------------------CCeEEEEcCCCCEEE
Confidence 001 1123789999975 578888776 468999999999998
Q ss_pred EEECCCCC-----eeccceeeEEE-CCEEEEEeCCCCeEEEEe
Q 017371 334 NLVDPTGQ-----LMSFVTSGLQV-DNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 334 ~~~~~~g~-----~~~~~t~~~~~-~g~L~igs~~~~~i~~~~ 370 (372)
.+....|. .+..+.+++.+ +|+|||.+ ..|.+.+++
T Consensus 209 ~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs-E~n~~y~f~ 250 (255)
T 3qqz_A 209 EMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS-EPNRFYRFT 250 (255)
T ss_dssp EEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE-TTTEEEEEE
T ss_pred EEEcCCccCCcccccCCCCeeEECCCCCEEEEc-CCceEEEEE
Confidence 88777552 35678899998 59999997 447888875
No 114
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.12 E-value=6.6e-08 Score=90.42 Aligned_cols=237 Identities=15% Similarity=0.125 Sum_probs=133.9
Q ss_pred ceEecCCCCCCCccEEEcCCC-cEEEEec----------CCeEEEEe--CCce-EEEEec-------CCCcccCeEEcCC
Q 017371 70 FIKVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTW-VNWKFI-------DSQTLVGLTSTKE 128 (372)
Q Consensus 70 ~~~~~~g~~~~p~~i~~d~~G-~l~v~~~----------~g~i~~~~--~g~~-~~~~~~-------~~~p~~gl~~d~d 128 (372)
+..+..|. .|+ ++++++| .+|+++. ++.|..|| ++++ ..+..+ +..|. ++++++|
T Consensus 72 ~~~I~vG~--~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~-~~a~spD 147 (386)
T 3sjl_D 72 IGMIDGGF--LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW-MTSLTPD 147 (386)
T ss_dssp EEEEEECS--SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GEEECTT
T ss_pred EEEEECCC--CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCc-eEEEcCC
Confidence 34455563 686 9999998 6999872 46689999 5553 334322 23789 9999999
Q ss_pred CC-EEEEeC--CCcEEEEc-CCC--cEEEeeecCCcccccccc----eEEccCCcEEEEeCCCCCCCcccccccccccCC
Q 017371 129 GH-LIICDN--ANGLHKVS-EDG--VENFLSYVNGSKLRFAND----VVEASDGSLYFTVSSSKYLPHEYCLDILEGKPH 198 (372)
Q Consensus 129 G~-l~v~~~--~~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~----l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~ 198 (372)
|+ |||++. ...|..+| .++ +..+. .++....+|.+ ++..+||+
T Consensus 148 Gk~lyVan~~~~~~VsVID~~t~~vv~tI~--v~g~~~~~P~g~~~~~~~~~DG~------------------------- 200 (386)
T 3sjl_D 148 GKTLLFYQFSPAPAVGVVDLEGKAFKRMLD--VPDCYHIFPTAPDTFFMHCRDGS------------------------- 200 (386)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEEE--CCSEEEEEEEETTEEEEEETTSC-------------------------
T ss_pred CCEEEEEEcCCCCeEEEEECCCCcEEEEEE--CCCcceeecCCCceeEEECCCCC-------------------------
Confidence 95 899975 35688999 666 33332 12211112222 23444554
Q ss_pred CeEEEEeCCC-CeEEEEeCC------ccCcceEEEe-cCCCEEEEEeCCCCeEEEEEccCCCCcce---eeecc--C---
Q 017371 199 GQLLKYDPSS-NITTLVADG------FYFANGVALS-RDEDYVVVCESWKFRCRKYWLKGERKGKL---ETFAE--N--- 262 (372)
Q Consensus 199 g~v~~~d~~t-~~~~~~~~~------~~~~~gi~~~-~dg~~l~v~~~~~~~i~~~~~~g~~~~~~---~~~~~--~--- 262 (372)
+..++.++ +++...... ....+..+++ +||+.+|++. +.+|+.++..+....-. ..+.. .
T Consensus 201 --~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g 276 (386)
T 3sjl_D 201 --LAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEALTEAERADG 276 (386)
T ss_dssp --EEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEESSCHHHHHTT
T ss_pred --EEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceeecceecccccccccc
Confidence 44444332 222111111 1111223554 6786566555 45799999876532211 11111 0
Q ss_pred -CCCCCceeEEcCCC-CEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCC
Q 017371 263 -LPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPT 339 (372)
Q Consensus 263 -~~g~p~~i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~ 339 (372)
.++....+++++++ ++||+...... .- -..+.+.|..+|. .++++..+....
T Consensus 277 ~~p~g~q~~a~~~~~~~lyV~~~~~~~----~~---------------------hk~~~~~V~viD~~t~kv~~~i~vg~ 331 (386)
T 3sjl_D 277 WRPGGWQQVAYHRALDRIYLLVDQRDE----WR---------------------HKTASRFVVVLDAKTGERLAKFEMGH 331 (386)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECCT----TC---------------------TTSCEEEEEEEETTTCCEEEEEEEEE
T ss_pred ccCCCcceeeECCCCCeEEEEeccccc----cc---------------------cCCCCCEEEEEECCCCeEEEEEECCC
Confidence 11222347888776 79998753100 00 0112467999995 588888876532
Q ss_pred CCeeccceeeEEE-CC--EEEEEeCCCCeEEEEeC
Q 017371 340 GQLMSFVTSGLQV-DN--HLYVISLTSNFIGKVQL 371 (372)
Q Consensus 340 g~~~~~~t~~~~~-~g--~L~igs~~~~~i~~~~~ 371 (372)
.+.++... ++ +||+++..++.|.++|.
T Consensus 332 -----~~~~lavs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 332 -----EIDSINVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp -----EECEEEECSSSSCEEEEEETTTTEEEEEET
T ss_pred -----CcceEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 24455553 43 68888888999999985
No 115
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.12 E-value=2.3e-08 Score=92.99 Aligned_cols=228 Identities=11% Similarity=0.020 Sum_probs=149.2
Q ss_pred CCccEEEc-CCCcEEEEec---CC---eEEEEe-C---C------ce-EEEEe--cC---CCcccCeEEcCCCCEEEEeC
Q 017371 80 HPEDASMD-KNGVIYTATR---DG---WIKRLQ-D---G------TW-VNWKF--ID---SQTLVGLTSTKEGHLIICDN 136 (372)
Q Consensus 80 ~p~~i~~d-~~G~l~v~~~---~g---~i~~~~-~---g------~~-~~~~~--~~---~~p~~gl~~d~dG~l~v~~~ 136 (372)
-|.++++| .+|++|++-. .| .+..++ + + .. +-+.. .+ -.+. ++.+|+.|+|||.|.
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~-~v~iD~~~rLWVLDt 105 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIY-QPVIDDCRRLWVVDI 105 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEE-EEEECTTCEEEEEEC
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEee-EEEEcCCCcEEEEeC
Confidence 47889995 8899999872 22 345555 1 1 23 33321 11 1346 889999999999997
Q ss_pred CC----------------cEEEEc-C-C--C-cEEEeee-cCCcccccccceEEc-c-------CCcEEEEeCCCCCCCc
Q 017371 137 AN----------------GLHKVS-E-D--G-VENFLSY-VNGSKLRFANDVVEA-S-------DGSLYFTVSSSKYLPH 186 (372)
Q Consensus 137 ~~----------------gv~~~~-~-~--g-~~~l~~~-~~~~~~~~~~~l~~d-~-------dG~i~vtd~~~~~~~~ 186 (372)
+. .|+.+| . + . ++.+.-. ....+..+.++|++| . ++.+|++|+.
T Consensus 106 G~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~------ 179 (381)
T 3q6k_A 106 GSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL------ 179 (381)
T ss_dssp SSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT------
T ss_pred CCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC------
Confidence 61 277788 4 4 3 3332211 111223578899999 2 5689999973
Q ss_pred ccccccccccCCCeEEEEeCCCCeEEEEeCCc-------------------cCcceEEEecC----CCEEEEEeCCCCeE
Q 017371 187 EYCLDILEGKPHGQLLKYDPSSNITTLVADGF-------------------YFANGVALSRD----EDYVVVCESWKFRC 243 (372)
Q Consensus 187 ~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-------------------~~~~gi~~~~d----g~~l~v~~~~~~~i 243 (372)
.++|+.||..+++...+.... ....|++++|+ ++.||+.-..+.++
T Consensus 180 -----------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~l 248 (381)
T 3q6k_A 180 -----------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKV 248 (381)
T ss_dssp -----------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEE
T ss_pred -----------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcE
Confidence 457888887777655554211 13468999998 89999999988899
Q ss_pred EEEEc---cCCCC-cceeeeccCCCCCCc--eeEEc-CCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccC
Q 017371 244 RKYWL---KGERK-GKLETFAENLPGAPD--NINLA-PDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITL 316 (372)
Q Consensus 244 ~~~~~---~g~~~-~~~~~~~~~~~g~p~--~i~~d-~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~ 316 (372)
+++.. ..+.. ...+.+.+..+ ..+ ++++| ++|+||++...
T Consensus 249 y~V~T~~L~~~~~~~~v~~~G~kg~-~s~~~~~~~D~~~G~ly~~~~~-------------------------------- 295 (381)
T 3q6k_A 249 YSVNTKELKQKGGKLNPELLGNRGK-YNDAIALAYDPKTKVIFFAEAN-------------------------------- 295 (381)
T ss_dssp EEEEHHHHSSTTCCCCCEEEEECCT-TCCEEEEEECTTTCEEEEEESS--------------------------------
T ss_pred EEEEHHHhhCcchhhceEEeeecCC-CCCcceEEEeCCCCeEEEEecc--------------------------------
Confidence 99973 22222 22333332211 134 46776 89999999987
Q ss_pred CCceEEEEECCCC-c-----EEEEEECCCCCeeccceeeEEE-CCEEEEEeCCC
Q 017371 317 GGGAHLIHVAEDG-T-----IIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTS 363 (372)
Q Consensus 317 ~~~~~v~~~~~~g-~-----~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~ 363 (372)
...|.+.++++ . .....+++ . +.+++.+..+ +|+||+.+.+-
T Consensus 296 --~~aI~~w~~~~~~~~~~n~~~l~~d~--~-l~~pd~~~i~~~g~Lwv~sn~l 344 (381)
T 3q6k_A 296 --TKQVSCWNTQKMPLRMKNTDVVYTSS--R-FVFGTDISVDSKGGLWFMSNGF 344 (381)
T ss_dssp --SSEEEEEETTSCSBCGGGEEEEEECT--T-CCSEEEEEECTTSCEEEEECSC
T ss_pred --CCeEEEEeCCCCccccCceEEEEECC--C-ccccCeEEECCCCeEEEEECcc
Confidence 57899999887 2 24445665 2 6789999986 69999998654
No 116
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.12 E-value=1.4e-09 Score=104.66 Aligned_cols=171 Identities=9% Similarity=0.034 Sum_probs=108.1
Q ss_pred ceEEEEecCCCcccCeEEcCCCCEEEEeCCC-cEEEEc-CCC-cEEEeeecCC----cccccccceEEcc----CCcEEE
Q 017371 108 TWVNWKFIDSQTLVGLTSTKEGHLIICDNAN-GLHKVS-EDG-VENFLSYVNG----SKLRFANDVVEAS----DGSLYF 176 (372)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~-gv~~~~-~~g-~~~l~~~~~~----~~~~~~~~l~~d~----dG~i~v 176 (372)
+++.+......|. +|+++++|+|||++... .|++++ .+| .+.+...... .....+.+|++++ +|.||+
T Consensus 18 ~~~~~a~~l~~P~-~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 18 DKKVILSNLNKPH-ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp CEEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred EEEEEECCCCCce-EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 3455555667899 99999999999998765 499998 457 5544321111 1124566999998 789999
Q ss_pred EeCCCCCCCcccccccccccCCCeEEEEeCCC--C---eEEEEeC-----CccCcceEEEecCCCEEEEEeCC-------
Q 017371 177 TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS--N---ITTLVAD-----GFYFANGVALSRDEDYVVVCESW------- 239 (372)
Q Consensus 177 td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t--~---~~~~~~~-----~~~~~~gi~~~~dg~~l~v~~~~------- 239 (372)
+++...-.... .......+|+|++.+. + ..+++.+ ..+.+++++|++||+ ||++...
T Consensus 97 ~~s~~~~~~~~-----~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~ 170 (454)
T 1cru_A 97 SGTFKNPKSTD-----KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGDQGRNQLA 170 (454)
T ss_dssp EEEEECTTC-------CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECCTTTTSGG
T ss_pred EEeccccCCCc-----cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECCCCCCCcc
Confidence 86420000000 0000135788886532 1 2233332 345678999999997 9998431
Q ss_pred -------------------------CCeEEEEEccCCCC-c-------ceeeeccCCCCCCceeEEcCCCCEEEEEecCc
Q 017371 240 -------------------------KFRCRKYWLKGERK-G-------KLETFAENLPGAPDNINLAPDGTFWIAIIKLD 286 (372)
Q Consensus 240 -------------------------~~~i~~~~~~g~~~-~-------~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~ 286 (372)
..+|+|++.+|.-. . ..+++...+ ..|.++++|++|+||+++...+
T Consensus 171 ~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~-RNp~gla~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 171 YLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGH-RNPQGLAFTPNGKLLQSEQGPN 249 (454)
T ss_dssp GTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCC-SEEEEEEECTTSCEEEEEECSS
T ss_pred ccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECC-CCcceEEECCCCCEEEEecCCC
Confidence 35799999887410 0 234454322 3488999999999999997643
No 117
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.12 E-value=3e-09 Score=96.63 Aligned_cols=159 Identities=14% Similarity=0.131 Sum_probs=106.3
Q ss_pred ccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE-eCCc-------cCcceEEE---ec
Q 017371 161 RFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGF-------YFANGVAL---SR 228 (372)
Q Consensus 161 ~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~-~~~~-------~~~~gi~~---~~ 228 (372)
.+|.++++|+ +|++|+++. ..++|+++|++++..+.+ ..++ ..+.|+.+ ++
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l-----------------~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~ 75 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNL-----------------YKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDN 75 (334)
T ss_dssp CCCSCEEEETTTTEEEEEET-----------------TTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSS
T ss_pred cCCcCccCcCCCCEEEEEec-----------------cCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCC
Confidence 5888999976 789999976 468999999986654444 2222 24679999 78
Q ss_pred CCCEEEE-EeC------------CCCeEEEEEccCCCCcceeeecc------C-------CCCCCceeEEcCCCCEEEEE
Q 017371 229 DEDYVVV-CES------------WKFRCRKYWLKGERKGKLETFAE------N-------LPGAPDNINLAPDGTFWIAI 282 (372)
Q Consensus 229 dg~~l~v-~~~------------~~~~i~~~~~~g~~~~~~~~~~~------~-------~~g~p~~i~~d~~G~lwva~ 282 (372)
+++ ||+ ++. +...|.+|++++...++.....+ . ..+.++++++|++||+||+.
T Consensus 76 ~gr-L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~ 154 (334)
T 2p9w_A 76 SKR-LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAF 154 (334)
T ss_dssp CCE-EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEE
T ss_pred CCc-EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeC
Confidence 854 776 442 35789999998211111111111 1 22347899999999999987
Q ss_pred ecCchhHHHHhhcchhHHHHHHhcCccccccccCCCc-eEEEEECCCCcEEEEEEC--CCCCeeccceeeEEE-CC-EEE
Q 017371 283 IKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG-AHLIHVAEDGTIIRNLVD--PTGQLMSFVTSGLQV-DN-HLY 357 (372)
Q Consensus 283 ~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~-~~v~~~~~~g~~~~~~~~--~~g~~~~~~t~~~~~-~g-~L~ 357 (372)
.. . +.|++++++|+.+..+.. +........++++.. +| .|+
T Consensus 155 s~----------------------------------~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Li 200 (334)
T 2p9w_A 155 AL----------------------------------GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLI 200 (334)
T ss_dssp EE----------------------------------SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEE
T ss_pred CC----------------------------------CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEE
Confidence 76 3 689999999985554432 222223346777877 55 455
Q ss_pred EEeCCCCeEEEEeCC
Q 017371 358 VISLTSNFIGKVQLS 372 (372)
Q Consensus 358 igs~~~~~i~~~~~~ 372 (372)
+... ...|.++++.
T Consensus 201 v~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 201 AFGG-PRALTAFDVS 214 (334)
T ss_dssp EESS-SSSEEEEECS
T ss_pred EEcC-CCeEEEEcCC
Confidence 5555 8999998863
No 118
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.11 E-value=1.2e-08 Score=92.80 Aligned_cols=148 Identities=12% Similarity=0.014 Sum_probs=97.1
Q ss_pred EEEEecCCeEEEEe--CCceEEEEecCC---CcccCeEEcCCCC-EEEEeCC-CcEEEEc-CCC--cEEEeeecCCcccc
Q 017371 92 IYTATRDGWIKRLQ--DGTWVNWKFIDS---QTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDG--VENFLSYVNGSKLR 161 (372)
Q Consensus 92 l~v~~~~g~i~~~~--~g~~~~~~~~~~---~p~~gl~~d~dG~-l~v~~~~-~gv~~~~-~~g--~~~l~~~~~~~~~~ 161 (372)
++++..++.|..+| +++......... .|. +++++++|+ +|++... ..|..++ .++ ...+.....+....
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPM-VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCC-CEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCcc-ceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 44555788999999 555544333334 588 999999994 7888755 4588888 566 33332221111122
Q ss_pred cccceEEccCC-cEEEEeCCCCCCCccccccccccc--CCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeC
Q 017371 162 FANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGK--PHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCES 238 (372)
Q Consensus 162 ~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~--~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~ 238 (372)
.+.+++++++| .+|+++...... .... ..+.|+.+|.++++..........+.+++++||++++|++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~--------~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-- 152 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLE--------LTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-- 152 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEEC--------SSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--
T ss_pred cccceEECCCCCEEEEEecccccc--------cccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--
Confidence 57789999999 677764210000 0000 2478999999888766555445568899999999999998
Q ss_pred CCCeEEEEEccCC
Q 017371 239 WKFRCRKYWLKGE 251 (372)
Q Consensus 239 ~~~~i~~~~~~g~ 251 (372)
++.|+.+++.+.
T Consensus 153 -~~~i~~~d~~~~ 164 (337)
T 1pby_B 153 -GRDLHVMDPEAG 164 (337)
T ss_dssp -SSSEEEEETTTT
T ss_pred -CCeEEEEECCCC
Confidence 356999998654
No 119
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.08 E-value=6.7e-08 Score=95.53 Aligned_cols=242 Identities=14% Similarity=0.095 Sum_probs=149.4
Q ss_pred EecCCCCCCCccEEEcCCC-cEEEEecCCeEEEEe-C-C--ceEEEEecCCCcccCeEEc----CCCC-EEEEeCC-CcE
Q 017371 72 KVGEGSVNHPEDASMDKNG-VIYTATRDGWIKRLQ-D-G--TWVNWKFIDSQTLVGLTST----KEGH-LIICDNA-NGL 140 (372)
Q Consensus 72 ~~~~g~~~~p~~i~~d~~G-~l~v~~~~g~i~~~~-~-g--~~~~~~~~~~~p~~gl~~d----~dG~-l~v~~~~-~gv 140 (372)
.+..| ..|++++++++| .+|+++.+|.|..|| . . +...-...+..|. +++++ +||+ +||++.. ..+
T Consensus 192 ~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~-~ia~s~~~~pDGk~l~v~n~~~~~v 268 (567)
T 1qks_A 192 VLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR-SIETSKMEGWEDKYAIAGAYWPPQY 268 (567)
T ss_dssp EEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEETTEE
T ss_pred EEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc-eeEEccccCCCCCEEEEEEccCCeE
Confidence 44444 378999999998 589999899999999 3 2 2222234466789 99999 5995 8888655 557
Q ss_pred EEEc-CCC--cEEEeee-c--CCc---ccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeE
Q 017371 141 HKVS-EDG--VENFLSY-V--NGS---KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT 211 (372)
Q Consensus 141 ~~~~-~~g--~~~l~~~-~--~~~---~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~ 211 (372)
..+| .+. +..+... . .+. +...+..+...+++..|+.. ....|.|+.+|..+.+.
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~----------------~~~~g~v~~vd~~~~~~ 332 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN----------------VKETGKILLVDYTDLNN 332 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE----------------ETTTTEEEEEETTCSSE
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE----------------ecCCCeEEEEecCCCcc
Confidence 8888 444 3333221 1 110 01123456666666555432 23578999999765432
Q ss_pred EEE--eCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeec-cCCCCCC-ceeE-EcCC-CCEEEEEecC
Q 017371 212 TLV--ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA-ENLPGAP-DNIN-LAPD-GTFWIAIIKL 285 (372)
Q Consensus 212 ~~~--~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~-~~~~g~p-~~i~-~d~~-G~lwva~~~~ 285 (372)
..+ ...-.++.++.|++||+++|++....++|..++.+..++... .-. ...+ .| .+.. ++++ |.+|++....
T Consensus 333 ~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~-i~vgg~~P-hpg~g~~~~~p~~g~v~~t~~~g 410 (567)
T 1qks_A 333 LKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI-EDTGGQTP-HPGRGANFVHPTFGPVWATSHMG 410 (567)
T ss_dssp EEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE-EECSSSSB-CCTTCEEEEETTTEEEEEEEBSS
T ss_pred ceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE-EeccCcCC-CCccceeeECCCCCcEEEeCCCC
Confidence 111 122356778999999999999998889999999875432221 111 1111 12 3544 5776 6899877531
Q ss_pred chhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC--------CcEEEEEECCCCCeeccceeeEE--ECCE
Q 017371 286 DARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED--------GTIIRNLVDPTGQLMSFVTSGLQ--VDNH 355 (372)
Q Consensus 286 ~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~--------g~~~~~~~~~~g~~~~~~t~~~~--~~g~ 355 (372)
.+.|..++.+ .++++.+....+. ...+.. ++.+
T Consensus 411 ---------------------------------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g----~~~i~~~p~~~~ 453 (567)
T 1qks_A 411 ---------------------------------DDSVALIGTDPEGHPDNAWKILDSFPALGGG----SLFIKTHPNSQY 453 (567)
T ss_dssp ---------------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC----CCCEECCTTCSE
T ss_pred ---------------------------------CCeEEEecCCCCCCccccCEEEEEEecCCCC----CEEEEeCCCCCe
Confidence 2456666643 4677777654221 112223 3468
Q ss_pred EEEEeCC------CCeEEEEeC
Q 017371 356 LYVISLT------SNFIGKVQL 371 (372)
Q Consensus 356 L~igs~~------~~~i~~~~~ 371 (372)
||+.+.. ++.|+++++
T Consensus 454 l~v~~~~~~~~~~~~~v~v~d~ 475 (567)
T 1qks_A 454 LYVDATLNPEAEISGSVAVFDI 475 (567)
T ss_dssp EEEECTTCSSHHHHTCEEEEEG
T ss_pred EEEecCCCCCcccCceEEEEEC
Confidence 9998853 359999985
No 120
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.07 E-value=5.4e-07 Score=81.48 Aligned_cols=183 Identities=14% Similarity=0.171 Sum_probs=115.8
Q ss_pred CCCCCCccEEEcCCCc-EEEEecCCeEEEEe--CCceEEEEecC-CCcccCeEEcCCCCEEEEeCCC-cEEEEc-CCC--
Q 017371 76 GSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFID-SQTLVGLTSTKEGHLIICDNAN-GLHKVS-EDG-- 147 (372)
Q Consensus 76 g~~~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~~~~~~-~~p~~gl~~d~dG~l~v~~~~~-gv~~~~-~~g-- 147 (372)
|.-....++++.++|. |..+..+|.|..++ +++........ .... .+++.++|+++++.... .+..++ .++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-DVAWSSDSNLLVSASDDKTLKIWDVSSGKC 99 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceE-EEEEcCCCCEEEEECCCCEEEEEECCCCcE
Confidence 4445677899999886 55566899999998 56544433322 3345 89999999877665444 466677 555
Q ss_pred cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cCcceEEE
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVAL 226 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~~~gi~~ 226 (372)
...+... ...+..+++.+++++.++-. .++.|..+|..+++........ .....+++
T Consensus 100 ~~~~~~~-----~~~v~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 100 LKTLKGH-----SNYVFCCNFNPQSNLIVSGS-----------------FDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp EEEEECC-----SSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEEcCC-----CCCEEEEEEcCCCCEEEEEe-----------------CCCcEEEEECCCCEEEEEecCCCCcEEEEEE
Confidence 3333211 12456788999998777532 4678999998877654444332 23457889
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++++.++.+. .++.|..+++...+ ....+..........++++++|++.++...
T Consensus 158 ~~~~~~l~~~~-~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 158 NRDGSLIVSSS-YDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp CTTSSEEEEEE-TTSCEEEEETTTCC--EEEEECCSSCCCEEEEEECTTSSEEEEEET
T ss_pred cCCCCEEEEEe-CCCcEEEEECCCCc--eeeEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 99999665554 46678888875432 122222222222455889999987776654
No 121
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.06 E-value=5.7e-08 Score=84.66 Aligned_cols=154 Identities=15% Similarity=0.134 Sum_probs=109.8
Q ss_pred cccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC--ccCcceEEEecCCCEEEEEe
Q 017371 160 LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYVVVCE 237 (372)
Q Consensus 160 ~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--~~~~~gi~~~~dg~~l~v~~ 237 (372)
..+..+|.++. +++|++... .+...|.++|++++++...... -.+..|+++ +++.||+..
T Consensus 20 ~~ftqGL~~~~-~~LyestG~---------------~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~lt 81 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGE---------------TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLT 81 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECC---------------TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEE
T ss_pred ccccccEEEEC-CEEEEECCC---------------CCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEE
Confidence 35777999976 899998642 1345899999999988764432 334445554 577899999
Q ss_pred CCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCC
Q 017371 238 SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLG 317 (372)
Q Consensus 238 ~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~ 317 (372)
...+.+++|+.++. .....+. .++.+-+++.| .+.||+++.+
T Consensus 82 w~~~~v~v~D~~tl--~~~~ti~--~~~~Gwglt~d-g~~L~vSdgs--------------------------------- 123 (243)
T 3mbr_X 82 WRNHEGFVYDLATL--TPRARFR--YPGEGWALTSD-DSHLYMSDGT--------------------------------- 123 (243)
T ss_dssp SSSSEEEEEETTTT--EEEEEEE--CSSCCCEEEEC-SSCEEEECSS---------------------------------
T ss_pred eeCCEEEEEECCcC--cEEEEEe--CCCCceEEeeC-CCEEEEECCC---------------------------------
Confidence 99999999998653 2222332 22334566655 3589999854
Q ss_pred CceEEEEECCC-CcEEEEEECC-CCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 318 GGAHLIHVAED-GTIIRNLVDP-TGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 318 ~~~~v~~~~~~-g~~~~~~~~~-~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
+.|..+|++ .+++..+... +|..+.....+...+|+||...+..+.|.+||.
T Consensus 124 --~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp 177 (243)
T 3mbr_X 124 --AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDP 177 (243)
T ss_dssp --SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECT
T ss_pred --CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEEC
Confidence 579999976 6777776552 455555666777779999999999999999985
No 122
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.05 E-value=5.5e-07 Score=84.37 Aligned_cols=243 Identities=10% Similarity=0.034 Sum_probs=139.6
Q ss_pred eEecCCCCCCCccEEEcCCC-cEEEEec----------CCeEEEEe--CCceE-EEEec-------CCCcccCeEEcCCC
Q 017371 71 IKVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTWV-NWKFI-------DSQTLVGLTSTKEG 129 (372)
Q Consensus 71 ~~~~~g~~~~p~~i~~d~~G-~l~v~~~----------~g~i~~~~--~g~~~-~~~~~-------~~~p~~gl~~d~dG 129 (372)
..+..| ..| ++++++|| .+|+++. ++.|..|| +++.. .+... ...|. +++++|||
T Consensus 61 ~~i~~g--~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG 136 (373)
T 2mad_H 61 GHVNGG--FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNN 136 (373)
T ss_pred EEecCC--CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCC
Confidence 345555 368 99999998 6999872 46688998 44433 22222 24688 99999999
Q ss_pred C-EEEEeCC--CcEEEEcCCCcEEEeeecCCcccccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEe
Q 017371 130 H-LIICDNA--NGLHKVSEDGVENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYD 205 (372)
Q Consensus 130 ~-l~v~~~~--~gv~~~~~~g~~~l~~~~~~~~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d 205 (372)
+ ||+++.. ..|..+| ...+.+....+. +..+.+.++| +.|++.. ++|++..+|
T Consensus 137 ~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-----~~~~~~~~~~~~~~~~~~-----------------~dg~~~~vd 193 (373)
T 2mad_H 137 ADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-----PTCYHIHPGAPSTFYLLC-----------------AQGGLAKTD 193 (373)
T ss_pred CEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-----CceEEEEeCCCceEEEEc-----------------CCCCEEEEE
Confidence 5 8888642 4588888 542222110111 1123344444 5666543 567888888
Q ss_pred CCCCeEEEEeC-----CccCc--ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeec--c----CCCCCCce---
Q 017371 206 PSSNITTLVAD-----GFYFA--NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA--E----NLPGAPDN--- 269 (372)
Q Consensus 206 ~~t~~~~~~~~-----~~~~~--~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~--~----~~~g~p~~--- 269 (372)
. +++...... .-..| ....+.++++.+|+.. ....++.++..+........+. . ...-.|.+
T Consensus 194 ~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 271 (373)
T 2mad_H 194 H-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQ 271 (373)
T ss_pred C-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEe
Confidence 8 666542211 01111 2234566666666665 3557998888653221111111 0 01113566
Q ss_pred eEEcCCC-CEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC-CcEEEEEECCCCCeeccce
Q 017371 270 INLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVT 347 (372)
Q Consensus 270 i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t 347 (372)
++++++| ++||+.... .... -....+.|..+|.. ++++..+.... .+.
T Consensus 272 ~~~s~d~~~lyV~~~~~-~~~~------------------------~~~~~~~V~VID~~t~~vv~~i~~g~-----~p~ 321 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQ-SAWK------------------------LHAAAKEVTSVTGLVGQTSSQISLGH-----DVD 321 (373)
T ss_pred EEECCCCCEEEEEeccC-Cccc------------------------ccCCCCeEEEEECCCCEEEEEEECCC-----CcC
Confidence 8889987 699987531 0000 00113578889965 67778775532 244
Q ss_pred eeEEE--CC-EEEEEeCCCCeEEEEeCC
Q 017371 348 SGLQV--DN-HLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 348 ~~~~~--~g-~L~igs~~~~~i~~~~~~ 372 (372)
++... +. .+|+++...+.|.++|++
T Consensus 322 ~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 322 AISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 55554 45 578777778999999863
No 123
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.03 E-value=1.5e-06 Score=79.41 Aligned_cols=234 Identities=14% Similarity=0.108 Sum_probs=146.6
Q ss_pred CCCCCCCccEEEcCCCcEE-EEecCCeEEEEe--CCc-eEEEEecCCCcccCeEEcCCCCEEEEeCCCc-EEEEc-CCCc
Q 017371 75 EGSVNHPEDASMDKNGVIY-TATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDGV 148 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G~l~-v~~~~g~i~~~~--~g~-~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~g-v~~~~-~~g~ 148 (372)
.|.-....++++.+++.+. .+..++.|..|+ +++ ...+........ .+++.|+|+.+++....| +..++ .++.
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~g~~dg~v~i~~~~~~~ 155 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW-TLAFSPDSQYLATGTHVGKVNIFGVESGK 155 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC-CEEECTTSSEEEEECTTSEEEEEETTTCS
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE-EEEECCCCCEEEEEcCCCcEEEEEcCCCc
Confidence 3444456678888887554 455899999999 554 333433334556 899999998777655544 66667 5552
Q ss_pred EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCcc-CcceEEEe
Q 017371 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY-FANGVALS 227 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~-~~~gi~~~ 227 (372)
........+ ..+..+++.++|+..++- ..++.|..+|..+++......+.. ....++++
T Consensus 156 ~~~~~~~~~---~~v~~~~~spdg~~lasg-----------------~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 215 (321)
T 3ow8_A 156 KEYSLDTRG---KFILSIAYSPDGKYLASG-----------------AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 215 (321)
T ss_dssp EEEEEECSS---SCEEEEEECTTSSEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC
T ss_pred eeEEecCCC---ceEEEEEECCCCCEEEEE-----------------cCCCeEEEEECCCCcEEEEEcccCCceeEEEEc
Confidence 211111111 346688999999877752 256789999998887655554433 34689999
Q ss_pred cCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcC
Q 017371 228 RDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 307 (372)
Q Consensus 228 ~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p 307 (372)
||++.| ++...+..|..+++...+. ...+. ...+....+++.++|.+.++...
T Consensus 216 pd~~~l-~s~s~dg~i~iwd~~~~~~--~~~~~-~h~~~v~~~~~sp~~~~l~s~s~----------------------- 268 (321)
T 3ow8_A 216 PDSQLL-VTASDDGYIKIYDVQHANL--AGTLS-GHASWVLNVAFCPDDTHFVSSSS----------------------- 268 (321)
T ss_dssp TTSCEE-EEECTTSCEEEEETTTCCE--EEEEC-CCSSCEEEEEECTTSSEEEEEET-----------------------
T ss_pred CCCCEE-EEEcCCCeEEEEECCCcce--eEEEc-CCCCceEEEEECCCCCEEEEEeC-----------------------
Confidence 999855 4555566788888764321 12222 23334567899999987776655
Q ss_pred ccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 308 KLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 308 ~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|..+| .+++.+..+....+ .+.++... ++...+..-....|.+++.
T Consensus 269 -----------D~~v~iwd~~~~~~~~~~~~h~~----~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 269 -----------DKSVKVWDVGTRTCVHTFFDHQD----QVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp -----------TSCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred -----------CCcEEEEeCCCCEEEEEEcCCCC----cEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 34566666 35777777755433 46777775 4443344444566766654
No 124
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.02 E-value=6.4e-08 Score=91.51 Aligned_cols=187 Identities=9% Similarity=0.055 Sum_probs=115.2
Q ss_pred cEEEEe-cCCeEEEEe-C-C----ceEEEEe--------cCCCcccCeEEcCCCCEEEEeCCC-------cEEEEc-CCC
Q 017371 91 VIYTAT-RDGWIKRLQ-D-G----TWVNWKF--------IDSQTLVGLTSTKEGHLIICDNAN-------GLHKVS-EDG 147 (372)
Q Consensus 91 ~l~v~~-~~g~i~~~~-~-g----~~~~~~~--------~~~~p~~gl~~d~dG~l~v~~~~~-------gv~~~~-~~g 147 (372)
+||+.. .+++|+.+| . . ++..... ...+|. +++..|+| |||+..+. ++..+| .++
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph-~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLH-TVHCGPDA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEE-EEEECSSC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCccc-ceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 788887 788999999 2 2 2222221 123788 89999999 99975443 699999 444
Q ss_pred --cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcc-----cccccccccCCCeEEEEeCCCCeEEEEeCC---
Q 017371 148 --VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHE-----YCLDILEGKPHGQLLKYDPSSNITTLVADG--- 217 (372)
Q Consensus 148 --~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~-----~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--- 217 (372)
+..+. ....+..+..++.+.+++++.++.. |+.-. +....++.....+|..||.++++.......
T Consensus 175 ~v~~~~~--~~~~~~~~~Yd~~~~p~~~~mvsS~---wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 175 EPLGKWE--IDRGDQYLAYDFWWNLPNEVLVSSE---WAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CEEEECC--SBCTTCCCCCCEEEETTTTEEEECB---CCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred eEEEEEc--cCCCCccccceEEECCCCCEEEEcc---CcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 33222 1222334566788899998766632 22100 110111114567899999987765443322
Q ss_pred ccCcceEEE--ecCCCEEEEEeC-----CCCeEEEEEccCCCCcceeee-------ccCC----------CCCCceeEEc
Q 017371 218 FYFANGVAL--SRDEDYVVVCES-----WKFRCRKYWLKGERKGKLETF-------AENL----------PGAPDNINLA 273 (372)
Q Consensus 218 ~~~~~gi~~--~~dg~~l~v~~~-----~~~~i~~~~~~g~~~~~~~~~-------~~~~----------~g~p~~i~~d 273 (372)
-..|..+.+ +|+++++|++.. ..+.|++++.++........+ ...+ ++.|.+|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 135666766 999999999887 777888776654221111110 0011 3568999999
Q ss_pred CCC-CEEEEEec
Q 017371 274 PDG-TFWIAIIK 284 (372)
Q Consensus 274 ~~G-~lwva~~~ 284 (372)
+|| .|||+++.
T Consensus 330 ~DGrfLYVSnrg 341 (462)
T 2ece_A 330 LDDKFLYLSLWG 341 (462)
T ss_dssp TTSCEEEEEETT
T ss_pred CCCCEEEEEeCC
Confidence 999 59999987
No 125
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.02 E-value=8.4e-07 Score=80.37 Aligned_cols=224 Identities=11% Similarity=0.017 Sum_probs=142.4
Q ss_pred CCccEEEcCCCc-EEEEecCCeEEEEe--CCce---EEEEecCCCcccCeEEcCCCCEEEE-eCCCcEEEEc-CCC--cE
Q 017371 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VE 149 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~---~~~~~~~~~p~~gl~~d~dG~l~v~-~~~~gv~~~~-~~g--~~ 149 (372)
...++++.++|. |+++..+|.|..++ +++. ..+........ .+++.++|+++++ .....+..++ .++ ..
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 456788998885 66667899999999 4442 22222233445 8999999976555 4444578888 555 33
Q ss_pred EEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecC
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRD 229 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~d 229 (372)
.+.. . ...+..+++.++|+.+++-. .++.|..+|..+++.............++++++
T Consensus 178 ~~~~--~---~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 178 QFQG--H---TDGASCIDISNDGTKLWTGG-----------------LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235 (337)
T ss_dssp EECC--C---SSCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTTEEEEEEECSSCEEEEEECTT
T ss_pred eeec--c---cCceEEEEECCCCCEEEEEe-----------------cCCcEEEEECCCCceEeeecCCCceEEEEECCC
Confidence 2211 1 13467889999997666522 467899999887776554444444567899999
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCcc
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 309 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~ 309 (372)
++.++++. .++.|..+++.+.+. ..+. ...+....+++.++|++.++...
T Consensus 236 ~~~l~~~~-~~~~i~~~~~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~------------------------- 285 (337)
T 1gxr_A 236 GEWLAVGM-ESSNVEVLHVNKPDK---YQLH-LHESCVLSLKFAYCGKWFVSTGK------------------------- 285 (337)
T ss_dssp SSEEEEEE-TTSCEEEEETTSSCE---EEEC-CCSSCEEEEEECTTSSEEEEEET-------------------------
T ss_pred CCEEEEEc-CCCcEEEEECCCCCe---EEEc-CCccceeEEEECCCCCEEEEecC-------------------------
Confidence 99777665 456798898865431 1222 23344678999999987776655
Q ss_pred ccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CC-EEEEEeCCCCeEEEEeC
Q 017371 310 FSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQL 371 (372)
Q Consensus 310 ~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~L~igs~~~~~i~~~~~ 371 (372)
.+.+..++ .+++.+...... ..++++... ++ .|+.++ ....|.++++
T Consensus 286 ---------dg~i~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~ 335 (337)
T 1gxr_A 286 ---------DNLLNAWRTPYGASIFQSKES-----SSVLSCDISVDDKYIVTGS-GDKKATVYEV 335 (337)
T ss_dssp ---------TSEEEEEETTTCCEEEEEECS-----SCEEEEEECTTSCEEEEEE-TTSCEEEEEE
T ss_pred ---------CCcEEEEECCCCeEEEEecCC-----CcEEEEEECCCCCEEEEec-CCCeEEEEEE
Confidence 45777777 346666444322 236666665 34 455555 5566776654
No 126
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.97 E-value=3.7e-08 Score=91.94 Aligned_cols=223 Identities=10% Similarity=-0.066 Sum_probs=128.5
Q ss_pred CceEecCCCCCCCccEEEcCCC-cEEEEec----------CCeEEEEe--CCceE-EEEec-------CCCcccCeEEcC
Q 017371 69 DFIKVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTWV-NWKFI-------DSQTLVGLTSTK 127 (372)
Q Consensus 69 ~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~----------~g~i~~~~--~g~~~-~~~~~-------~~~p~~gl~~d~ 127 (372)
.+..+..|. .| +++++++| .+|+++. ++.|..|| +++.. ++.-+ +..|. +++++|
T Consensus 58 v~~~i~vG~--~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~-~ia~Sp 133 (368)
T 1mda_H 58 TLGHSLGAF--LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH-IIGNCA 133 (368)
T ss_dssp EEEEEEECT--TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT-SEEECT
T ss_pred EEEEEeCCC--CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc-eEEEcC
Confidence 344555563 68 89999988 8999972 57799999 55544 33322 24699 999999
Q ss_pred CC-CEEEEeCC--CcEEE--Ec-CCCcEEEeeecCCcccccccc----eEEccCCcEEEEeCCC------CCC-------
Q 017371 128 EG-HLIICDNA--NGLHK--VS-EDGVENFLSYVNGSKLRFAND----VVEASDGSLYFTVSSS------KYL------- 184 (372)
Q Consensus 128 dG-~l~v~~~~--~gv~~--~~-~~g~~~l~~~~~~~~~~~~~~----l~~d~dG~i~vtd~~~------~~~------- 184 (372)
|| .|||++.. ..+.. +| .+ ...+.. ++.....+.+ ++..+||++.+.|... +..
T Consensus 134 DGk~lyVan~~~~~~v~V~~iD~~t-v~~i~v--~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i 210 (368)
T 1mda_H 134 SSACLLFFLFGSSAAAGLSVPGASD-DQLTKS--ASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQ 210 (368)
T ss_dssp TSSCEEEEECSSSCEEEEEETTTEE-EEEEEC--SSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTS
T ss_pred CCCEEEEEccCCCCeEEEEEEchhh-ceEEEC--CCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeee
Confidence 99 59999753 34656 66 33 222211 1100011111 3344555443333321 000
Q ss_pred -Cc--cc----ccccccccCCCeEEEEeCCCCeEEEEeC----------CccCcce---EEEecCCCEEEEEeC---C--
Q 017371 185 -PH--EY----CLDILEGKPHGQLLKYDPSSNITTLVAD----------GFYFANG---VALSRDEDYVVVCES---W-- 239 (372)
Q Consensus 185 -~~--~~----~~~~~~~~~~g~v~~~d~~t~~~~~~~~----------~~~~~~g---i~~~~dg~~l~v~~~---~-- 239 (372)
.. .. ....+.... +.|+.+|..+++.+.+.. ....|.| +++++|++++|++.. +
T Consensus 211 ~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~ 289 (368)
T 1mda_H 211 NCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSC 289 (368)
T ss_dssp CBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCT
T ss_pred eCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcc
Confidence 00 00 000001111 668888876544333221 1123455 889999999999764 3
Q ss_pred ---CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEe-cCchhHHHHhhcchhHHHHHHhcCccccccc
Q 017371 240 ---KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAII-KLDARRMKILNSSKLIKHVLAAYPKLFSQFI 314 (372)
Q Consensus 240 ---~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~-~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~ 314 (372)
.+.+..+|....+... .+. ..+.|.+|++++||+ +|+++. .
T Consensus 290 ~~~~~~~~ViD~~t~~vv~--~i~--vg~~p~gi~~s~Dg~~l~va~~~~------------------------------ 335 (368)
T 1mda_H 290 LAAAENTSSVTASVGQTSG--PIS--NGHDSDAIIAAQDGASDNYANSAG------------------------------ 335 (368)
T ss_dssp TSCEEEEEEEESSSCCEEE--CCE--EEEEECEEEECCSSSCEEEEEETT------------------------------
T ss_pred cccCCCEEEEECCCCeEEE--EEE--CCCCcceEEECCCCCEEEEEccCC------------------------------
Confidence 3467788886543211 111 122599999999995 999998 4
Q ss_pred cCCCceEEEEECC-CCcEEEEEEC
Q 017371 315 TLGGGAHLIHVAE-DGTIIRNLVD 337 (372)
Q Consensus 315 ~~~~~~~v~~~~~-~g~~~~~~~~ 337 (372)
.+.|..+|. +++++..+..
T Consensus 336 ----~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 336 ----TEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp ----TTEEEEEESSSCEEEEECCC
T ss_pred ----CCeEEEEECCCCcEEEEEEC
Confidence 468888984 5777777654
No 127
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.96 E-value=1.1e-07 Score=90.00 Aligned_cols=188 Identities=12% Similarity=0.135 Sum_probs=114.7
Q ss_pred CCCCccEEEcCCCcEEEEe-cC------CeEEEEe--CCce-EEEEec---CCCcccCeEEcCCCCEEEEeC--------
Q 017371 78 VNHPEDASMDKNGVIYTAT-RD------GWIKRLQ--DGTW-VNWKFI---DSQTLVGLTSTKEGHLIICDN-------- 136 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~v~~-~~------g~i~~~~--~g~~-~~~~~~---~~~p~~gl~~d~dG~l~v~~~-------- 136 (372)
...|+.+...++| +|++. .+ |.|..+| ++++ .+|... .+.++ .+.+.++++.+++..
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY-DFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC-CEEEETTTTEEEECBCCCHHHHT
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc-eEEECCCCCEEEEccCcCccccc
Confidence 4589999999999 99976 33 6899999 4554 344322 12345 577789998766653
Q ss_pred ------------CCcEEEEc-CCC--cEEEeeecCCcccccccceEE--ccCC-cEEEEeC-CCCCCCcccccccccccC
Q 017371 137 ------------ANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVE--ASDG-SLYFTVS-SSKYLPHEYCLDILEGKP 197 (372)
Q Consensus 137 ------------~~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~--d~dG-~i~vtd~-~~~~~~~~~~~~~~~~~~ 197 (372)
...|..++ .++ ...+.. +.....|..|.+ +++| .+|++.. +. ..-
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v---g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~-------------~~L 278 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL---GEENRMALELRPLHDPTKLMGFINMVVSL-------------KDL 278 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEES---CTTEEEEEEEEECSSTTCCEEEEEEEEET-------------TTC
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEec---CCCCCccceeEeeECCCCCEEEEEEeeec-------------cCC
Confidence 35688888 555 333322 111235566655 8998 4777542 00 001
Q ss_pred CCeEEEEeCCCCeEEEEe-----C----C------------ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCC-Ccc
Q 017371 198 HGQLLKYDPSSNITTLVA-----D----G------------FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER-KGK 255 (372)
Q Consensus 198 ~g~v~~~d~~t~~~~~~~-----~----~------------~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~-~~~ 255 (372)
++.|+.+..+.++++... . . ...|.+|.+++||++||+++.+.+.|..|++.... ...
T Consensus 279 ss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~l 358 (462)
T 2ece_A 279 SSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVL 358 (462)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred CceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 234443322224332211 1 0 14578999999999999999999999999986332 111
Q ss_pred eee-ecc------------CCCCCCceeEEcCCC-CEEEEEe
Q 017371 256 LET-FAE------------NLPGAPDNINLAPDG-TFWIAII 283 (372)
Q Consensus 256 ~~~-~~~------------~~~g~p~~i~~d~~G-~lwva~~ 283 (372)
... ... .+.+.|.++++++|| .+||++.
T Consensus 359 v~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 359 TGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp EEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred EEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 111 111 122469999999999 5888763
No 128
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.95 E-value=1.2e-06 Score=86.23 Aligned_cols=224 Identities=13% Similarity=0.149 Sum_probs=141.3
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe-CCce-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC--cEEEe
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ-DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG--VENFL 152 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~-~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g--~~~l~ 152 (372)
....++++.++|. |.++..+|.|..++ +++. ..+........ ++++.++|+.+++... ..+..++.++ ...+.
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~ 423 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 423 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEE-EEEECTTSSCEEEEETTSEEEEECTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEec
Confidence 3456788999885 45566889888888 6653 33333334455 8999999986655444 4466667555 33332
Q ss_pred eecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCE
Q 017371 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDY 232 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~ 232 (372)
.. . ..+..+++.+|++..++-. .++.|..+|........+...-.....++++||++.
T Consensus 424 ~~-~----~~v~~~~~s~d~~~l~~~~-----------------~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~ 481 (577)
T 2ymu_A 424 GH-S----SSVWGVAFSPDDQTIASAS-----------------DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQT 481 (577)
T ss_dssp CC-S----SCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCE
T ss_pred CC-C----CCeEEEEECCCCCEEEEEc-----------------CCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCE
Confidence 11 1 2456789999998776532 467788888764444444433344567899999996
Q ss_pred EEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccc
Q 017371 233 VVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 312 (372)
Q Consensus 233 l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~ 312 (372)
|..+. .+..|..++.++.. ...+. ...+....+++.++|++.++...
T Consensus 482 las~~-~d~~i~iw~~~~~~---~~~~~-~h~~~v~~l~~s~dg~~l~s~~~---------------------------- 528 (577)
T 2ymu_A 482 IASAS-DDKTVKLWNRNGQL---LQTLT-GHSSSVRGVAFSPDGQTIASASD---------------------------- 528 (577)
T ss_dssp EEEEE-TTSEEEEEETTSCE---EEEEE-CCSSCEEEEEECTTSSCEEEEET----------------------------
T ss_pred EEEEe-CCCEEEEEcCCCCE---EEEEe-CCCCCEEEEEEcCCCCEEEEEEC----------------------------
Confidence 65544 45677777765431 22222 22234567899999987666554
Q ss_pred cccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCE-EEEEeCCCCeEEEE
Q 017371 313 FITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVISLTSNFIGKV 369 (372)
Q Consensus 313 ~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~-L~igs~~~~~i~~~ 369 (372)
.+.|..+|.+|+.+..+....+ .++++.+. +|+ |.-++. ...|.++
T Consensus 529 ------dg~v~lwd~~~~~~~~~~~h~~----~v~~~~fs~dg~~l~s~~~-D~~i~~W 576 (577)
T 2ymu_A 529 ------DKTVKLWNRNGQLLQTLTGHSS----SVWGVAFSPDGQTIASASS-DKTVKLW 576 (577)
T ss_dssp ------TSEEEEECTTSCEEEEEECCSS----CEEEEEECTTSSCEEEEET-TSCEEEE
T ss_pred ------cCEEEEEeCCCCEEEEEcCCCC----CEEEEEEcCCCCEEEEEeC-CCEEEEe
Confidence 4678888888999888875443 47777775 444 544443 3445443
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.93 E-value=5.1e-07 Score=79.95 Aligned_cols=164 Identities=13% Similarity=0.072 Sum_probs=103.1
Q ss_pred cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CC-C-cEEEeeecCCcccccccceEEccC
Q 017371 97 RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-ED-G-VENFLSYVNGSKLRFANDVVEASD 171 (372)
Q Consensus 97 ~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~-g-~~~l~~~~~~~~~~~~~~l~~d~d 171 (372)
.++.|+.++ +++...+....+... ++++.|+|+.++......++.++ .+ + ...+.. +.....+..+++.++
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFE-APNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDT---GFATICNNDHGISPD 95 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCE-EEEECTTSSEEEEEETTEEEEEESSSCCSCEECCC---TTCCCBCSCCEECTT
T ss_pred cceeEEEEeCCCCceeeeccCCcceE-eeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecc---ccccccccceEECCC
Confidence 467788888 566665555455566 99999999866665556788888 66 6 443322 111235678999999
Q ss_pred CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCCC--eEEEEEcc
Q 017371 172 GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKF--RCRKYWLK 249 (372)
Q Consensus 172 G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~--~i~~~~~~ 249 (372)
|+.+++... .......|+.++..+++...+.. ......++++||++.++++..... +|+.++..
T Consensus 96 g~~l~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~ 161 (297)
T 2ojh_A 96 GALYAISDK-------------VEFGKSAIYLLPSTGGTPRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID 161 (297)
T ss_dssp SSEEEEEEC-------------TTTSSCEEEEEETTCCCCEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CCEEEEEEe-------------CCCCcceEEEEECCCCceEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECC
Confidence 975554221 01145789999987776555433 233567889999998886654444 45555554
Q ss_pred CCCCcceeeeccCCCCCCceeEEcCCCC-EEEEE
Q 017371 250 GERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 282 (372)
Q Consensus 250 g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~ 282 (372)
+.. ...+. ...+.+..+.++++|+ ++++.
T Consensus 162 ~~~---~~~~~-~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 162 SGV---ETRLT-HGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp TCC---EEECC-CSSSCEEEEEECTTSSEEEEEE
T ss_pred CCc---ceEcc-cCCCccccceECCCCCEEEEEe
Confidence 432 22222 2333467788999997 44444
No 130
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.93 E-value=1.1e-07 Score=92.96 Aligned_cols=190 Identities=12% Similarity=0.054 Sum_probs=116.0
Q ss_pred CC-cEEEEe-cCCeEEEEe--CCceEEEEe--cCCCcccCeEE-c-CCCC-EEEEeC-----------------CC-cEE
Q 017371 89 NG-VIYTAT-RDGWIKRLQ--DGTWVNWKF--IDSQTLVGLTS-T-KEGH-LIICDN-----------------AN-GLH 141 (372)
Q Consensus 89 ~G-~l~v~~-~~g~i~~~~--~g~~~~~~~--~~~~p~~gl~~-d-~dG~-l~v~~~-----------------~~-gv~ 141 (372)
|| .+|+.+ .+++|.++| ..+...+.. .+..|. |+++ . |+++ +|+++. +. -+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph-g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH-GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE-EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc-ceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 55 799988 678999999 445443222 345688 9998 4 6774 666631 11 355
Q ss_pred EEc-CCCcEEEee-ecCCcccccccceEEccCC-cEEEEeCCCCCCC---------ccccc--------ccc-cc--cCC
Q 017371 142 KVS-EDGVENFLS-YVNGSKLRFANDVVEASDG-SLYFTVSSSKYLP---------HEYCL--------DIL-EG--KPH 198 (372)
Q Consensus 142 ~~~-~~g~~~l~~-~~~~~~~~~~~~l~~d~dG-~i~vtd~~~~~~~---------~~~~~--------~~~-~~--~~~ 198 (372)
.+| .+. ++... ...+ .|.++++++|| .+|++...++-+. .++.. ... .+ ..-
T Consensus 179 vID~~t~-~v~~qI~Vgg----~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i 253 (595)
T 1fwx_A 179 AVDADKW-EVAWQVLVSG----NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQEL 253 (595)
T ss_dssp EEETTTT-EEEEEEEESS----CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEE
T ss_pred EEECCCC-eEEEEEEeCC----CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEE
Confidence 666 333 22111 1122 47899999998 5677665432210 01100 000 00 001
Q ss_pred CeEEEEeCCC--CeE-EEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCC------Ccce-eeeccC-CCCCC
Q 017371 199 GQLLKYDPSS--NIT-TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER------KGKL-ETFAEN-LPGAP 267 (372)
Q Consensus 199 g~v~~~d~~t--~~~-~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~------~~~~-~~~~~~-~~g~p 267 (372)
+.|..+|..+ ++. ......-..|.|+.++|||+++|+++...+.|..|+.+..+ +... ...... ....|
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP 333 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 333 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence 4588999986 433 22333446899999999999999999999999999986321 1111 111111 22359
Q ss_pred ceeEEcCCCCEEEEEec
Q 017371 268 DNINLAPDGTFWIAIIK 284 (372)
Q Consensus 268 ~~i~~d~~G~lwva~~~ 284 (372)
..+++|++|++|++..-
T Consensus 334 ~h~aF~~dG~aY~t~~l 350 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFL 350 (595)
T ss_dssp EEEEECTTSEEEEEETT
T ss_pred ceEEECCCCeEEEEEec
Confidence 99999999999999864
No 131
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.93 E-value=2e-06 Score=84.47 Aligned_cols=225 Identities=13% Similarity=0.164 Sum_probs=136.8
Q ss_pred CCCccEEEcCCCcE-EEEecCCeEEEEe-CC-ceEEEEecCCCcccCeEEcCCCCEEEEeCCCc-EEEEcCCC--cEEEe
Q 017371 79 NHPEDASMDKNGVI-YTATRDGWIKRLQ-DG-TWVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVSEDG--VENFL 152 (372)
Q Consensus 79 ~~p~~i~~d~~G~l-~v~~~~g~i~~~~-~g-~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~g-v~~~~~~g--~~~l~ 152 (372)
....++++.++|.. ..+..+|.|..++ ++ ....+........ ++++.++|+..++....| +..++.++ ...+.
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~ 382 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVW-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 382 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTCCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEE-EEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEec
Confidence 34567889988854 4555888898888 44 3444433334456 899999998766654445 55556555 33332
Q ss_pred eecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCE
Q 017371 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDY 232 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~ 232 (372)
.. ...+..+++.+||+..++-. .++.|..+|........+...-.....++++||++.
T Consensus 383 ~~-----~~~v~~~~~s~dg~~l~~~~-----------------~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 440 (577)
T 2ymu_A 383 GH-----SSSVRGVAFSPDGQTIASAS-----------------DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQT 440 (577)
T ss_dssp CC-----SSCEEEEEECTTSSCEEEEE-----------------TTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred CC-----CCCeEEEEECCCCCEEEEEe-----------------CCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCE
Confidence 11 12466899999998666522 457788888654434433333334467899999996
Q ss_pred EEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccc
Q 017371 233 VVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 312 (372)
Q Consensus 233 l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~ 312 (372)
+..+. .+..|..++.++.. ...+. ........++++++|.+.++...
T Consensus 441 l~~~~-~d~~v~~w~~~~~~---~~~~~-~~~~~v~~~~~spd~~~las~~~---------------------------- 487 (577)
T 2ymu_A 441 IASAS-DDKTVKLWNRNGQL---LQTLT-GHSSSVRGVAFSPDGQTIASASD---------------------------- 487 (577)
T ss_dssp EEEEE-TTSEEEEEETTSCE---EEEEE-CCSSCEEEEEECTTSCEEEEEET----------------------------
T ss_pred EEEEc-CCCEEEEEECCCCE---EEEEc-CCCCCEEEEEEcCCCCEEEEEeC----------------------------
Confidence 66554 45678777765431 22222 22334567899999998777655
Q ss_pred cccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-CCE-EEEEeCCCCeEEEEe
Q 017371 313 FITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVISLTSNFIGKVQ 370 (372)
Q Consensus 313 ~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~-L~igs~~~~~i~~~~ 370 (372)
.+.|..++.+|+.+..+....+ .++++.+. +++ |..++ ....|..++
T Consensus 488 ------d~~i~iw~~~~~~~~~~~~h~~----~v~~l~~s~dg~~l~s~~-~dg~v~lwd 536 (577)
T 2ymu_A 488 ------DKTVKLWNRNGQLLQTLTGHSS----SVRGVAFSPDGQTIASAS-DDKTVKLWN 536 (577)
T ss_dssp ------TSEEEEEETTSCEEEEEECCSS----CEEEEEECTTSSCEEEEE-TTSEEEEEC
T ss_pred ------CCEEEEEcCCCCEEEEEeCCCC----CEEEEEEcCCCCEEEEEE-CcCEEEEEe
Confidence 4566667777887777765433 35556554 333 33333 334454444
No 132
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.91 E-value=2.9e-07 Score=86.08 Aligned_cols=135 Identities=11% Similarity=0.001 Sum_probs=85.1
Q ss_pred CcEEEEec-----CCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeC----------CCcEEEEc-CCC--c
Q 017371 90 GVIYTATR-----DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDN----------ANGLHKVS-EDG--V 148 (372)
Q Consensus 90 G~l~v~~~-----~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~----------~~gv~~~~-~~g--~ 148 (372)
..+|+++. ++.|+.+| ++++......+..| +++++|||+ |||++. ...|..+| .++ .
T Consensus 45 ~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~ 122 (386)
T 3sjl_D 45 RRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPT 122 (386)
T ss_dssp TEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred CEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEE
Confidence 37999984 67899999 56654444444555 499999995 999873 13488898 555 3
Q ss_pred EEEeeecCCc---ccccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC----ccC
Q 017371 149 ENFLSYVNGS---KLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----FYF 220 (372)
Q Consensus 149 ~~l~~~~~~~---~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~----~~~ 220 (372)
..+... .+. ....|.++++++|| ++|+++.. ..+.|..+|..++++...... ...
T Consensus 123 ~~I~v~-~g~r~~~g~~P~~~a~spDGk~lyVan~~----------------~~~~VsVID~~t~~vv~tI~v~g~~~~~ 185 (386)
T 3sjl_D 123 ADIELP-DAPRFLVGTYPWMTSLTPDGKTLLFYQFS----------------PAPAVGVVDLEGKAFKRMLDVPDCYHIF 185 (386)
T ss_dssp EEEEET-TCCCCCBSCCGGGEEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEEEE
T ss_pred EEEECC-CccccccCCCCceEEEcCCCCEEEEEEcC----------------CCCeEEEEECCCCcEEEEEECCCcceee
Confidence 333221 111 12368899999999 58998642 357899999998876543321 122
Q ss_pred cce----EEEecCCCEEEEEeCCCCeE
Q 017371 221 ANG----VALSRDEDYVVVCESWKFRC 243 (372)
Q Consensus 221 ~~g----i~~~~dg~~l~v~~~~~~~i 243 (372)
|.| +++++||+.+|+.....+++
T Consensus 186 P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 186 PTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred cCCCceeEEECCCCCEEEEECCCCCeE
Confidence 333 35667777555554332344
No 133
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.91 E-value=1.7e-06 Score=79.68 Aligned_cols=232 Identities=9% Similarity=-0.010 Sum_probs=138.9
Q ss_pred CCccEEEcCCCcEE-EEecCCeEEEEe--CCc---eEEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC-cEE
Q 017371 80 HPEDASMDKNGVIY-TATRDGWIKRLQ--DGT---WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VEN 150 (372)
Q Consensus 80 ~p~~i~~d~~G~l~-v~~~~g~i~~~~--~g~---~~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g-~~~ 150 (372)
...++++.++|.+. ++..+|.|..|+ +++ ...+....+... .+++.++|+++++... ..+..++ .++ ...
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT-GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCccc-EEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 46688999988654 555899999998 554 333333334455 8999999986665444 4477777 555 222
Q ss_pred EeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe----EEEEeCC-ccCcceEE
Q 017371 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVADG-FYFANGVA 225 (372)
Q Consensus 151 l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~----~~~~~~~-~~~~~gi~ 225 (372)
.... .. ....+..+++.++|+..++-. .++.|..+|..+++ ...+... ......++
T Consensus 89 ~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-----------------~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 89 TLVI-LR-INRAARCVRWAPNEKKFAVGS-----------------GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 149 (372)
T ss_dssp EEEC-CC-CSSCEEEEEECTTSSEEEEEE-----------------TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE
T ss_pred eEEe-ec-CCCceeEEEECCCCCEEEEEe-----------------CCCEEEEEEecCCCcceeeeeeecccCCCeeEEE
Confidence 2111 11 113567889999997666522 34556665554443 2222222 23456789
Q ss_pred EecCCCEEEEEeCCCCeEEEEEccCCC---------------CcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHH
Q 017371 226 LSRDEDYVVVCESWKFRCRKYWLKGER---------------KGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRM 290 (372)
Q Consensus 226 ~~~dg~~l~v~~~~~~~i~~~~~~g~~---------------~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~ 290 (372)
++++++.++.+. .++.|..|++.... .+..........+....++++++|++.++...
T Consensus 150 ~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------ 222 (372)
T 1k8k_C 150 WHPNSVLLAAGS-CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH------ 222 (372)
T ss_dssp ECTTSSEEEEEE-TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET------
T ss_pred EcCCCCEEEEEc-CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC------
Confidence 999998666554 45678888854210 11111111122334667889999976666554
Q ss_pred HHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEE
Q 017371 291 KILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGK 368 (372)
Q Consensus 291 ~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~ 368 (372)
.+.|..+|. +++.+..+....+ .++++... ++++.+++ ....|.+
T Consensus 223 ----------------------------d~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~-~d~~i~i 269 (372)
T 1k8k_C 223 ----------------------------DSTVCLADADKKMAVATLASETL----PLLAVTFITESSLVAAG-HDCFPVL 269 (372)
T ss_dssp ----------------------------TTEEEEEEGGGTTEEEEEECSSC----CEEEEEEEETTEEEEEE-TTSSCEE
T ss_pred ----------------------------CCEEEEEECCCCceeEEEccCCC----CeEEEEEecCCCEEEEE-eCCeEEE
Confidence 456777774 5788887775433 35666665 66666666 6667766
Q ss_pred EeC
Q 017371 369 VQL 371 (372)
Q Consensus 369 ~~~ 371 (372)
+++
T Consensus 270 ~~~ 272 (372)
T 1k8k_C 270 FTY 272 (372)
T ss_dssp EEE
T ss_pred EEc
Confidence 654
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.89 E-value=6.3e-07 Score=85.12 Aligned_cols=204 Identities=16% Similarity=0.115 Sum_probs=129.6
Q ss_pred CCccEEEcCCCc-EEEEecC---CeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCC---CcEEEEc-CCC-
Q 017371 80 HPEDASMDKNGV-IYTATRD---GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA---NGLHKVS-EDG- 147 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~~---g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~---~gv~~~~-~~g- 147 (372)
...++++.++|. |+++..+ ..|+.++ +|+.+.+....+... .+++.|||+ |+++... ..|+.++ .++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~-~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG-APAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc-CEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 456788999995 5555544 4899999 666665554444556 899999997 5434332 2488888 556
Q ss_pred cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEE
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 226 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~ 226 (372)
...+... . .....+++.+||+ |+++.. ......|+.+|.++++.+.+.........++|
T Consensus 259 ~~~l~~~-~----~~~~~~~~spdg~~l~~~s~---------------~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~ 318 (415)
T 2hqs_A 259 IRQVTDG-R----SNNTEPTWFPDSQNLAFTSD---------------QAGRPQVYKVNINGGAPQRITWEGSQNQDADV 318 (415)
T ss_dssp EEECCCC-S----SCEEEEEECTTSSEEEEEEC---------------TTSSCEEEEEETTSSCCEECCCSSSEEEEEEE
T ss_pred EEeCcCC-C----CcccceEECCCCCEEEEEEC---------------CCCCcEEEEEECCCCCEEEEecCCCcccCeEE
Confidence 4433211 1 2345788999997 555421 11334799999988876654433334457899
Q ss_pred ecCCCEEEEEeCC--CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHH
Q 017371 227 SRDEDYVVVCESW--KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLA 304 (372)
Q Consensus 227 ~~dg~~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~ 304 (372)
+|||++++++... ...|+.+++++.+. ..+... .....+++.++|+..+.....
T Consensus 319 spdG~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~~~--~~~~~~~~spdg~~l~~~s~~------------------- 374 (415)
T 2hqs_A 319 SSDGKFMVMVSSNGGQQHIAKQDLATGGV---QVLSST--FLDETPSLAPNGTMVIYSSSQ------------------- 374 (415)
T ss_dssp CTTSSEEEEEEECSSCEEEEEEETTTCCE---EECCCS--SSCEEEEECTTSSEEEEEEEE-------------------
T ss_pred CCCCCEEEEEECcCCceEEEEEECCCCCE---EEecCC--CCcCCeEEcCCCCEEEEEEcC-------------------
Confidence 9999988887653 35788898875432 222222 246678999999744433320
Q ss_pred hcCccccccccCCCceEEEEECCCCcEEEEEECCCC
Q 017371 305 AYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTG 340 (372)
Q Consensus 305 ~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g 340 (372)
.....|+.++.+|+....+....+
T Consensus 375 ------------~~~~~l~~~d~~g~~~~~l~~~~~ 398 (415)
T 2hqs_A 375 ------------GMGSVLNLVSTDGRFKARLPATDG 398 (415)
T ss_dssp ------------TTEEEEEEEETTSCCEEECCCSSS
T ss_pred ------------CCccEEEEEECCCCcEEEeeCCCC
Confidence 012368888888887776655544
No 135
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.88 E-value=1.1e-06 Score=81.92 Aligned_cols=216 Identities=12% Similarity=0.132 Sum_probs=128.0
Q ss_pred CCCcEEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCCcEEEeeecCCcc--ccc
Q 017371 88 KNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDGVENFLSYVNGSK--LRF 162 (372)
Q Consensus 88 ~~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g~~~l~~~~~~~~--~~~ 162 (372)
.+|.+|+++.+|.|+.+| +|+...-....+.......+. +|.+|++....+++.+| .+|............ ...
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS-DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 478999999999999999 576543223222333133343 78999987666799999 678222222211111 011
Q ss_pred ccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCcc------------CcceEEEecCC
Q 017371 163 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY------------FANGVALSRDE 230 (372)
Q Consensus 163 ~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~------------~~~gi~~~~dg 230 (372)
....+++ +|.+|++. ..+.|+.+|+++|+..+...... ......+. +
T Consensus 181 ~~~~~~~-~~~v~~g~------------------~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~--~ 239 (376)
T 3q7m_A 181 ESAPTTA-FGAAVVGG------------------DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV--N 239 (376)
T ss_dssp CCCCEEE-TTEEEECC------------------TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE--T
T ss_pred CCCcEEE-CCEEEEEc------------------CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE--C
Confidence 1223333 67888842 45789999998888766432110 00111222 3
Q ss_pred CEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccc
Q 017371 231 DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLF 310 (372)
Q Consensus 231 ~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~ 310 (372)
+.+|+... +..++.++..+.+. .+..... ....+.++ ++++|+++..
T Consensus 240 ~~v~~~~~-~g~l~~~d~~tG~~----~w~~~~~-~~~~~~~~-~~~l~~~~~~-------------------------- 286 (376)
T 3q7m_A 240 GVVFALAY-NGNLTALDLRSGQI----MWKRELG-SVNDFIVD-GNRIYLVDQN-------------------------- 286 (376)
T ss_dssp TEEEEECT-TSCEEEEETTTCCE----EEEECCC-CEEEEEEE-TTEEEEEETT--------------------------
T ss_pred CEEEEEec-CcEEEEEECCCCcE----EeeccCC-CCCCceEE-CCEEEEEcCC--------------------------
Confidence 45887753 56799999854321 1111121 13345554 6789999864
Q ss_pred cccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 311 SQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 311 ~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
+.++++|. +|+.+.......+. ..+.....+++||+++.. ..|..++.
T Consensus 287 ---------g~l~~~d~~tG~~~w~~~~~~~~---~~~~~~~~~~~l~v~~~~-g~l~~~d~ 335 (376)
T 3q7m_A 287 ---------DRVMALTIDGGVTLWTQSDLLHR---LLTSPVLYNGNLVVGDSE-GYLHWINV 335 (376)
T ss_dssp ---------CCEEEEETTTCCEEEEECTTTTS---CCCCCEEETTEEEEECTT-SEEEEEET
T ss_pred ---------CeEEEEECCCCcEEEeecccCCC---cccCCEEECCEEEEEeCC-CeEEEEEC
Confidence 57899995 68888776533222 234455678999999864 46766664
No 136
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.87 E-value=6.7e-06 Score=74.32 Aligned_cols=181 Identities=12% Similarity=0.096 Sum_probs=113.3
Q ss_pred CCCccEEEcCCCcEEEEecCCeEEEEe--CCc----eEEEE--ecCCCcccCeEEcCCCCEEEE-eCCCcEEEEc-CCC-
Q 017371 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGT----WVNWK--FIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG- 147 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~----~~~~~--~~~~~p~~gl~~d~dG~l~v~-~~~~gv~~~~-~~g- 147 (372)
....++++.++|.+.++..+|.|..|+ .++ ...+. ....... .+++.++|+++++ .....+..++ .++
T Consensus 52 ~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIR-SCKLLPDGCTLIVGGEASTLSIWDLAAPT 130 (337)
T ss_dssp SCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEE-EEEECTTSSEEEEEESSSEEEEEECCCC-
T ss_pred CceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEE-EEEEcCCCCEEEEEcCCCcEEEEECCCCC
Confidence 457789999999766555599999998 332 22222 2223345 8999999985555 4334477777 444
Q ss_pred cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-ccCcceEEE
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVAL 226 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~-~~~~~gi~~ 226 (372)
....... .+. ...+..+++.++|+..++-. .++.|..+|..+++....... ......+++
T Consensus 131 ~~~~~~~-~~~-~~~i~~~~~~~~~~~l~~~~-----------------~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~ 191 (337)
T 1gxr_A 131 PRIKAEL-TSS-APACYALAISPDSKVCFSCC-----------------SDGNIAVWDLHNQTLVRQFQGHTDGASCIDI 191 (337)
T ss_dssp -EEEEEE-ECS-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred cceeeec-ccC-CCceEEEEECCCCCEEEEEe-----------------CCCcEEEEeCCCCceeeeeecccCceEEEEE
Confidence 2222111 111 12456889999997666522 467899999887776554443 334567899
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++++.++.+. .++.|..+++...+. ...+ ...+....+++.++|++.+....
T Consensus 192 ~~~~~~l~~~~-~dg~i~~~d~~~~~~--~~~~--~~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 192 SNDGTKLWTGG-LDNTVRSWDLREGRQ--LQQH--DFTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp CTTSSEEEEEE-TTSEEEEEETTTTEE--EEEE--ECSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCEEEEEe-cCCcEEEEECCCCce--Eeee--cCCCceEEEEECCCCCEEEEEcC
Confidence 99998776665 466888898865321 1122 12334677889999986666544
No 137
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.87 E-value=2.7e-06 Score=80.69 Aligned_cols=160 Identities=17% Similarity=0.166 Sum_probs=101.5
Q ss_pred CeEEEEe-CC-ceEEEEecCCCcccCeEEcCCCC-EEEEeCCC---cEEEEc-CCC-cEEEeeecCCcccccccceEEcc
Q 017371 99 GWIKRLQ-DG-TWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN---GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS 170 (372)
Q Consensus 99 g~i~~~~-~g-~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~---gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~d~ 170 (372)
+.|+.++ ++ ..+.+....+... .+++.|||+ |+.+.... .|+.++ .+| ...+... . ..+..+++.|
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~-~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~----~~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLM-SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-P----RHNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-S----SCEEEEEECT
T ss_pred ceEEEEcCCCCCCEEEeCCCCcce-eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-C----CcccCEEEcC
Confidence 6888888 44 4555544445566 899999997 44443332 588888 666 4443221 1 2456889999
Q ss_pred CCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCC--CCeEEEEE
Q 017371 171 DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW--KFRCRKYW 247 (372)
Q Consensus 171 dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~--~~~i~~~~ 247 (372)
||+ |+++... .....|+.+|..+++...+.........++|+|||+.++++... ..+|+.++
T Consensus 233 dg~~la~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 233 DGSKLAFALSK---------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp TSSEEEEEECT---------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCEEEEEEec---------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 997 5555321 13457999999888876654443445678999999988877643 23798888
Q ss_pred ccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 017371 248 LKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 248 ~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~ 283 (372)
+++.+. ..+. ........++++++|+..+...
T Consensus 298 ~~~~~~---~~l~-~~~~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 298 INGGAP---QRIT-WEGSQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp TTSSCC---EECC-CSSSEEEEEEECTTSSEEEEEE
T ss_pred CCCCCE---EEEe-cCCCcccCeEECCCCCEEEEEE
Confidence 876432 2221 1222345688899997544443
No 138
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.87 E-value=7.7e-07 Score=82.88 Aligned_cols=242 Identities=11% Similarity=0.065 Sum_probs=131.6
Q ss_pred EecCCCCCCCccEEEcCCC-cEEEEec----------CCeEEEEe--CCce-EEEEec------CCCcccCeEEcCCCC-
Q 017371 72 KVGEGSVNHPEDASMDKNG-VIYTATR----------DGWIKRLQ--DGTW-VNWKFI------DSQTLVGLTSTKEGH- 130 (372)
Q Consensus 72 ~~~~g~~~~p~~i~~d~~G-~l~v~~~----------~g~i~~~~--~g~~-~~~~~~------~~~p~~gl~~d~dG~- 130 (372)
.+..| ..| +++++++| .+|+++. ++.|..|| .++. ..+... ...|. ++++++||+
T Consensus 46 ~i~~g--~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~-~i~~spdg~~ 121 (361)
T 2oiz_A 46 MVPTA--FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDG-LFRQTTDGKF 121 (361)
T ss_dssp EEECC--EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGG-GEEECTTSSE
T ss_pred EecCC--CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcc-eEEECCCCCE
Confidence 44445 368 99999998 6899872 45699999 4443 333322 35688 999999995
Q ss_pred EEEEeCC--CcEEEEc-CCCcEEEeeecCCcccccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeC
Q 017371 131 LIICDNA--NGLHKVS-EDGVENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 206 (372)
Q Consensus 131 l~v~~~~--~gv~~~~-~~g~~~l~~~~~~~~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 206 (372)
||+++.. ..|..+| .++ +.+....+.. ...++.+.++| ..|++.. ++|++..++.
T Consensus 122 l~v~n~~~~~~v~v~d~~~~-~~~~~~i~~~---~~~~v~~~p~~~~~~~~~~-----------------~dg~~~~v~~ 180 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKG-DYVEDVTAAA---GCWSVIPQPNRPRSFMTIC-----------------GDGGLLTINL 180 (361)
T ss_dssp EEEEEESSSEEEEEEETTTT-EEEEEEGGGT---TEEEEEECTTSSSEEEEEE-----------------TTSSEEEEEE
T ss_pred EEEECCCCCCeEEEEECCCC-cEEEEEecCC---CcceeEEcCCCCeeEEEEC-----------------CCCcEEEEEE
Confidence 8888643 4588888 555 1111101111 01113333433 3344321 2344444433
Q ss_pred CC-CeEEE------EeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc------C---CCCCCcee
Q 017371 207 SS-NITTL------VADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE------N---LPGAPDNI 270 (372)
Q Consensus 207 ~t-~~~~~------~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~------~---~~g~p~~i 270 (372)
+. ++... +.+.-..|..+..+++++.+++... .+.|+.+++.+........+.. . .+..+..+
T Consensus 181 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 181 GEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSY-YGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp CTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBT-TSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeC-CCeEEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 21 33221 1111123444555677777776654 4578888876433221111110 0 11223348
Q ss_pred EEcCCC-CEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeecccee
Q 017371 271 NLAPDG-TFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTS 348 (372)
Q Consensus 271 ~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~ 348 (372)
+++++| .+|++....+... ....+.+.|..+|. +++.+..+.... +.+
T Consensus 260 a~~~dg~~lyv~~~~~~~~~------------------------~~~~~~~~v~viD~~t~~~v~~i~~~~------p~~ 309 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEG------------------------THKFPAAEIWVMDTKTKQRVARIPGRD------ALS 309 (361)
T ss_dssp EEETTTTEEEEEEESSCCTT------------------------CTTCCCSEEEEEETTTTEEEEEEECTT------CCE
T ss_pred EEecCCCeEEEEEccCCCcc------------------------cccCCCceEEEEECCCCcEEEEEecCC------eeE
Confidence 999985 7898875100000 00011347888885 578887776532 455
Q ss_pred eEEE--CCEEEEEeCCCCeEEEEeC
Q 017371 349 GLQV--DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 349 ~~~~--~g~L~igs~~~~~i~~~~~ 371 (372)
+... +.+||.++. +.|.++|.
T Consensus 310 ia~spdg~~l~v~n~--~~v~v~D~ 332 (361)
T 2oiz_A 310 MTIDQQRNLMLTLDG--GNVNVYDI 332 (361)
T ss_dssp EEEETTTTEEEEECS--SCEEEEEC
T ss_pred EEECCCCCEEEEeCC--CeEEEEEC
Confidence 6664 468998874 89999985
No 139
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.86 E-value=1.5e-06 Score=81.00 Aligned_cols=216 Identities=15% Similarity=0.169 Sum_probs=127.2
Q ss_pred CCcEEEEecCCeEEEEe--CCceEEEEecCCCc-----ccCeEEcCCCCEEEEeCCCcEEEEc-CCCcEEEeeecCCcc-
Q 017371 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQT-----LVGLTSTKEGHLIICDNANGLHKVS-EDGVENFLSYVNGSK- 159 (372)
Q Consensus 89 ~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p-----~~gl~~d~dG~l~v~~~~~gv~~~~-~~g~~~l~~~~~~~~- 159 (372)
+|.+|+++.+|.|+.++ +|+........... .....++ +|.+|++....+++.++ .+|...+........
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~ 221 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATG 221 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC---
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCC
Confidence 67999999999999999 67644322221111 1134444 68899986656799999 677222222111100
Q ss_pred ------cccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEE
Q 017371 160 ------LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 233 (372)
Q Consensus 160 ------~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l 233 (372)
+.......+..+|.+|++. ..+.|+.+|+++|+..+... .....++.+ +++.+
T Consensus 222 ~~~~~~~~~~~~~p~~~~~~v~~~~------------------~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~--~~~~l 280 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVVNGVVFALA------------------YNGNLTALDLRSGQIMWKRE-LGSVNDFIV--DGNRI 280 (376)
T ss_dssp --------CCCCCCEEETTEEEEEC------------------TTSCEEEEETTTCCEEEEEC-CCCEEEEEE--ETTEE
T ss_pred CcccccccccCCCcEEECCEEEEEe------------------cCcEEEEEECCCCcEEeecc-CCCCCCceE--ECCEE
Confidence 0001111122468899863 35789999999898766443 222334444 35568
Q ss_pred EEEeCCCCeEEEEEccCCCCcceeeeccCCC-CCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccc
Q 017371 234 VVCESWKFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQ 312 (372)
Q Consensus 234 ~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~-g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~ 312 (372)
|+... ++.|+.++..+.+.. ....... .......+ .+|.+|+++..
T Consensus 281 ~~~~~-~g~l~~~d~~tG~~~---w~~~~~~~~~~~~~~~-~~~~l~v~~~~---------------------------- 327 (376)
T 3q7m_A 281 YLVDQ-NDRVMALTIDGGVTL---WTQSDLLHRLLTSPVL-YNGNLVVGDSE---------------------------- 327 (376)
T ss_dssp EEEET-TCCEEEEETTTCCEE---EEECTTTTSCCCCCEE-ETTEEEEECTT----------------------------
T ss_pred EEEcC-CCeEEEEECCCCcEE---EeecccCCCcccCCEE-ECCEEEEEeCC----------------------------
Confidence 88875 457999998654211 1111111 11223334 35789998764
Q ss_pred cccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEe
Q 017371 313 FITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQ 370 (372)
Q Consensus 313 ~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~ 370 (372)
+.++.+| .+|+++..+....+. ..+.....+++||+++..+ .|..++
T Consensus 328 -------g~l~~~d~~tG~~~~~~~~~~~~---~~~~~~~~~~~l~v~~~~G-~l~~~~ 375 (376)
T 3q7m_A 328 -------GYLHWINVEDGRFVAQQKVDSSG---FQTEPVAADGKLLIQAKDG-TVYSIT 375 (376)
T ss_dssp -------SEEEEEETTTCCEEEEEECCTTC---BCSCCEEETTEEEEEBTTS-CEEEEE
T ss_pred -------CeEEEEECCCCcEEEEEecCCCc---ceeCCEEECCEEEEEeCCC-EEEEEe
Confidence 5799999 569998887764332 2344556789999999764 455544
No 140
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.82 E-value=1.2e-06 Score=82.09 Aligned_cols=235 Identities=8% Similarity=0.030 Sum_probs=142.9
Q ss_pred CCccEEEcCCC-cEEEEecCCeEEEEe-CC------ceEEEEecCCCcccCeEEcCC-CCEEEEeCC-CcEEEEc-CCCc
Q 017371 80 HPEDASMDKNG-VIYTATRDGWIKRLQ-DG------TWVNWKFIDSQTLVGLTSTKE-GHLIICDNA-NGLHKVS-EDGV 148 (372)
Q Consensus 80 ~p~~i~~d~~G-~l~v~~~~g~i~~~~-~g------~~~~~~~~~~~p~~gl~~d~d-G~l~v~~~~-~gv~~~~-~~g~ 148 (372)
...++++.++| .|.++..+|.|..|+ .. ....+....+... .+++.++ ++++++... ..|..++ .++.
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK-TVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC-EEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE-EEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 45678898888 466666899999998 32 1222222233445 8999998 666665444 4466677 3332
Q ss_pred ------EEEeeecCCcccccccceEEccC-CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC----
Q 017371 149 ------ENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---- 217 (372)
Q Consensus 149 ------~~l~~~~~~~~~~~~~~l~~d~d-G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~---- 217 (372)
..+...........+..+++.++ ++++++-. .++.|..+|..+++.......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-----------------~dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG-----------------SSNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES-----------------SSSCEEEEETTTTEEEEEECCCCCS
T ss_pred cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc-----------------CCCCEEEEECCCCCcceEEeccccc
Confidence 22111000111235678999998 67776532 467899999887776554433
Q ss_pred ---ccCcceEEEecCCCEEEEEeCCCC---eEEEEEccCCCCcceeeeccCCCCCCceeEEcC-CCCEEEEEecCchhHH
Q 017371 218 ---FYFANGVALSRDEDYVVVCESWKF---RCRKYWLKGERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIKLDARRM 290 (372)
Q Consensus 218 ---~~~~~gi~~~~dg~~l~v~~~~~~---~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~~~~~~~ 290 (372)
......++++|++..++++...++ .|..|++...... ...+.....+....+++.+ +|++.++...
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~------ 283 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-LQTLNQGHQKGILSLDWCHQDEHLLLSSGR------ 283 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-SBCCCSCCSSCEEEEEECSSCSSCEEEEES------
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-cEEeecCccCceeEEEeCCCCCCeEEEEeC------
Confidence 234567899999854555555555 7888888653111 1111101223456788888 7876666655
Q ss_pred HHhhcchhHHHHHHhcCccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CC-EEEEEeCCCCeEE
Q 017371 291 KILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIG 367 (372)
Q Consensus 291 ~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~L~igs~~~~~i~ 367 (372)
.+.|..+| .+++.+..+....+ .++++... ++ .+++.......|.
T Consensus 284 ----------------------------dg~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 284 ----------------------------DNTVLLWNPESAEQLSQFPARGN----WCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp ----------------------------SSEEEEECSSSCCEEEEEECSSS----CCCCEEECTTCTTEEEECCSSSEEE
T ss_pred ----------------------------CCCEEEeeCCCCccceeecCCCC----ceEEEEECCCCCCEEEEEecCCcEE
Confidence 46777788 45788877765443 36666765 34 5666555667788
Q ss_pred EEeC
Q 017371 368 KVQL 371 (372)
Q Consensus 368 ~~~~ 371 (372)
++++
T Consensus 332 iw~~ 335 (416)
T 2pm9_A 332 VQTL 335 (416)
T ss_dssp EEES
T ss_pred EEEc
Confidence 7775
No 141
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.81 E-value=4.7e-06 Score=76.30 Aligned_cols=246 Identities=13% Similarity=0.028 Sum_probs=139.6
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCC------cEEEEc-CCC-
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNAN------GLHKVS-EDG- 147 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~------gv~~~~-~~g- 147 (372)
....++++.++|. |+++..+|.|..|+ +++............ .+++.++|+.+++.... .+..++ ..+
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE-EEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 3456789998885 55566899999999 555433333444556 99999999866664433 455666 222
Q ss_pred -cEEEeeecC--------CcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC-CeEEEEeC-
Q 017371 148 -VENFLSYVN--------GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NITTLVAD- 216 (372)
Q Consensus 148 -~~~l~~~~~--------~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t-~~~~~~~~- 216 (372)
...+..... ......+..+++.++|+..++- ..++.|..+|..+ ++......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------~~dg~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG-----------------HKDGKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE-----------------ETTSEEEEEETTTTTEEEEEEEC
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE-----------------cCCCEEEEEECCCCcEeEEEEec
Confidence 211111100 0001156678888998766642 2567899999876 44433333
Q ss_pred CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcc
Q 017371 217 GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSS 296 (372)
Q Consensus 217 ~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~ 296 (372)
.......++++++++.++.+. .++.|..+++...+. ...+. .......++++++|.+.+..............
T Consensus 217 ~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~--~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 289 (369)
T 3zwl_B 217 HEKSISDMQFSPDLTYFITSS-RDTNSFLVDVSTLQV--LKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTS-- 289 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCE--EEEEE--CSSCEEEEEECSSSSEEEEEECCC----------
T ss_pred CCCceeEEEECCCCCEEEEec-CCceEEEEECCCCce--eeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEe--
Confidence 233456789999999776664 466788888865321 12222 22335678899999766655442110000000
Q ss_pred hhHHHHHHhcCccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 297 KLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 297 ~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
.......+..++ ..++.+..+....+ .++++... ++++.+.......|.++++
T Consensus 290 ------------------~~~~~~~i~~~d~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 290 ------------------ANEGKFEARFYHKIFEEEIGRVQGHFG----PLNTVAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp -----------------------CEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEEE
T ss_pred ------------------cCCCcceeEEEecCCCcchhheecccC----cEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 001111455555 35677777665433 46777775 4544444445567777764
No 142
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.81 E-value=3.7e-06 Score=77.68 Aligned_cols=227 Identities=11% Similarity=0.070 Sum_probs=136.9
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe--CCce-EEEE---ec-CCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cE
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTW-VNWK---FI-DSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VE 149 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~-~~~~---~~-~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~ 149 (372)
..++++.+++.|.++..+|.|..|+ +++. .... .. .+... .+++.++|+++++... .-|..+| .++ +.
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~-~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVS-TVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4568888999999999999999998 4432 2211 11 23345 8999999987766544 4477778 666 33
Q ss_pred EEeeecCCcccccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC---CccCcceEE
Q 017371 150 NFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD---GFYFANGVA 225 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~---~~~~~~gi~ 225 (372)
.+. +. ...+..+++.+++ +++++-+ .++.|..+|..+++...... .......++
T Consensus 164 ~~~----~h-~~~V~~~~~~~~~~~~l~s~s-----------------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 164 SYR----AH-AAQVTCVAASPHKDSVFLSCS-----------------EDNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp EEC----CC-SSCEEEEEECSSCTTEEEEEE-----------------TTSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred EEc----Cc-CCceEEEEecCCCCCceeeec-----------------cccccccccccccceeeeeecceeeccceeee
Confidence 331 11 1346678898887 5666532 46778889987766443322 122346788
Q ss_pred EecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHHHHhhcchhHHHHHH
Q 017371 226 LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRMKILNSSKLIKHVLA 304 (372)
Q Consensus 226 ~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~r~~~~ 304 (372)
+++++..++++...++.|..+++...+. ...+. ...+....+++.++|. +.++...
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~-~h~~~v~~v~fsp~g~~~lasgs~-------------------- 278 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSA-VHSQCVTGLVFSPHSVPFLASLSE-------------------- 278 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--C--CEEEE-CCSSCEEEEEECSSSSCCEEEEET--------------------
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcE--EEEEc-CCCCCEEEEEEccCCCeEEEEEeC--------------------
Confidence 9987666777766677888888764322 12222 2223356788999985 4443333
Q ss_pred hcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE--CCEEEEEeCCCCeEEEEeC
Q 017371 305 AYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 305 ~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|..+|.+...+..+... ...++++.+. +.+|....-....|.+.++
T Consensus 279 --------------D~~i~vwd~~~~~~~~~~~H----~~~V~~v~~sp~~~~llas~s~D~~v~~w~v 329 (344)
T 4gqb_B 279 --------------DCSLAVLDSSLSELFRSQAH----RDFVRDATWSPLNHSLLTTVGWDHQVVHHVV 329 (344)
T ss_dssp --------------TSCEEEECTTCCEEEEECCC----SSCEEEEEECSSSTTEEEEEETTSCEEEEEC
T ss_pred --------------CCeEEEEECCCCcEEEEcCC----CCCEEEEEEeCCCCeEEEEEcCCCeEEEEEC
Confidence 34566677554433333322 2357777775 3455544334556666654
No 143
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.81 E-value=2.7e-06 Score=78.58 Aligned_cols=183 Identities=11% Similarity=0.021 Sum_probs=108.4
Q ss_pred CccEEEcCCCcEEEEecCC-------eEEEEe---CC----ceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-C
Q 017371 81 PEDASMDKNGVIYTATRDG-------WIKRLQ---DG----TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-E 145 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g-------~i~~~~---~g----~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~ 145 (372)
-+++++.+||.+.++..++ .+..++ .+ ............. .+++.+++.|..+.....|..+| .
T Consensus 33 v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~d~~l~~~s~dg~v~lWd~~ 111 (344)
T 4gqb_B 33 LEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVA-DLTWVGERGILVASDSGAVELWELD 111 (344)
T ss_dssp EEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEE-EEEEETTTEEEEEETTSEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEE-EEEEeCCCeEEEEECCCEEEEEecc
Confidence 4578899999887776433 333333 01 0111111112345 88999998888776655566777 5
Q ss_pred CC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCcc-Ccc
Q 017371 146 DG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY-FAN 222 (372)
Q Consensus 146 ~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~-~~~ 222 (372)
++ ...+.....+- ...+..+++.++|+..++-+ .++.|..+|..+++......+.. ..+
T Consensus 112 ~~~~~~~~~~~~~~H-~~~V~~v~~spdg~~l~sgs-----------------~d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 112 ENETLIVSKFCKYEH-DDIVSTVSVLSSGTQAVSGS-----------------KDICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp TTSSCEEEEEEEECC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCCceeEeeccccCC-CCCEEEEEECCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEEcCcCCceE
Confidence 55 33332221111 13567899999998777632 56789999998887766555433 345
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCC-CCCCceeEEcCCC-CEEEEEec
Q 017371 223 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL-PGAPDNINLAPDG-TFWIAIIK 284 (372)
Q Consensus 223 gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~-~g~p~~i~~d~~G-~lwva~~~ 284 (372)
.+++++++..++++.+.++.|..+++...+.. ..+.... ...+..+++.+++ ++.++...
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWDTRCPKPA--SQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTSSSCE--EECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred EEEecCCCCCceeeecccccccccccccccee--eeeecceeeccceeeeecCCCCcceEEecc
Confidence 78899998767777767778888888654221 1121111 1234567777754 56655443
No 144
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.80 E-value=1.7e-05 Score=72.56 Aligned_cols=185 Identities=12% Similarity=0.155 Sum_probs=111.0
Q ss_pred CCCCccEEEcCCCc-EEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cE
Q 017371 78 VNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VE 149 (372)
Q Consensus 78 ~~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~ 149 (372)
-....++++.++|. |++++.+|.|..|+ +++. ..+....+... .+++.++|+++++... ..+..++ .++ ..
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIW-SIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA 110 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 34677899999885 55666899999998 5543 33333334455 8999999986666444 4477777 555 33
Q ss_pred EEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe------------EEEEeC-
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI------------TTLVAD- 216 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~------------~~~~~~- 216 (372)
.+. .. ..+..+++.++|+.+++-... .....+.|..+|..++. ...+..
T Consensus 111 ~~~--~~----~~v~~~~~~~~~~~l~~~~~~------------~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 172 (369)
T 3zwl_B 111 TWK--SP----VPVKRVEFSPCGNYFLAILDN------------VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH 172 (369)
T ss_dssp EEE--CS----SCEEEEEECTTSSEEEEEECC------------BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC
T ss_pred Eee--cC----CCeEEEEEccCCCEEEEecCC------------ccCCCCEEEEEEecCCccceeecccccceeeeccCC
Confidence 332 11 246688999999866653210 00122566666643221 111111
Q ss_pred -CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 217 -GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 217 -~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+......++++++++.++++. .++.|..|++.... .....+. ...+....++++++|++.++...
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 238 (369)
T 3zwl_B 173 EGLDAATVAGWSTKGKYIIAGH-KDGKISKYDVSNNY-EYVDSID-LHEKSISDMQFSPDLTYFITSSR 238 (369)
T ss_dssp TTCCCEEEEEECGGGCEEEEEE-TTSEEEEEETTTTT-EEEEEEE-CCSSCEEEEEECTTSSEEEEEET
T ss_pred cCccceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCc-EeEEEEe-cCCCceeEEEECCCCCEEEEecC
Confidence 111456788999999776655 46689999886421 1122222 23334677899999987666654
No 145
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.80 E-value=5.7e-07 Score=83.48 Aligned_cols=182 Identities=10% Similarity=0.049 Sum_probs=106.4
Q ss_pred CCccEEEcCCCcEEEEe-c------CCeEEEEe--CCce-----EEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-
Q 017371 80 HPEDASMDKNGVIYTAT-R------DGWIKRLQ--DGTW-----VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS- 144 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~-~------~g~i~~~~--~g~~-----~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~- 144 (372)
...++++.+||.+.++. . +|.|..++ ++.. ........... .+++.+++.++++.....|..++
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~-~~~~s~d~~~l~~s~dg~v~lWd~ 122 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVT-DVAWVSEKGILVASDSGAVELWEI 122 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEE-EEEEETTTEEEEEETTSCEEEC--
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEE-EEEEcCCCCEEEEECCCEEEEeec
Confidence 35678999999777654 3 56777776 3321 11112223345 89999999988887655566666
Q ss_pred CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-ccCc
Q 017371 145 EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFA 221 (372)
Q Consensus 145 ~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~-~~~~ 221 (372)
.++ .........+ ....+..+++.++|+..++-+ .++.|..+|..+++......+ ....
T Consensus 123 ~~~~~~~~~~~~~~~-h~~~V~~v~~spdg~~l~sgs-----------------~dg~v~iwd~~~~~~~~~~~~h~~~v 184 (357)
T 4g56_B 123 LEKESLLVNKFAKYE-HDDIVKTLSVFSDGTQAVSGG-----------------KDFSVKVWDLSQKAVLKSYNAHSSEV 184 (357)
T ss_dssp ------CCCCEEECC-CSSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred cccceeEEEeeccCC-CCCCEEEEEECCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEEcCCCCCE
Confidence 444 1111111111 113567899999998777632 567899999988876655543 2334
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCC-CEEEE
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIA 281 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwva 281 (372)
+.++++++++.++++...++.|..+++...+......+. .....+..+++.+++ ++.++
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC-ASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT-TCCSCEEEEEECTTSTTEEEE
T ss_pred EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec-cccccccchhhhhcccceEEE
Confidence 678899998766766666677888877543222111111 122335567787765 44443
No 146
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.79 E-value=3.8e-06 Score=78.63 Aligned_cols=137 Identities=5% Similarity=-0.142 Sum_probs=87.9
Q ss_pred cEEEEec--CC---eEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeC----------CCcEEEEc-CCC--cE
Q 017371 91 VIYTATR--DG---WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDN----------ANGLHKVS-EDG--VE 149 (372)
Q Consensus 91 ~l~v~~~--~g---~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~----------~~gv~~~~-~~g--~~ 149 (372)
.+|+.+. .+ .|+.+| ++++...... +..- +++++|||+ |||++. ...+..+| .+. ..
T Consensus 34 ~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~-g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~ 111 (373)
T 2mad_H 34 RSYINLPAHHSAIIQQWVLDAGSGSILGHVNG-GFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIA 111 (373)
T ss_pred EEEEeCCcccCCccEEEEEECCCCeEEEEecC-CCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEE
Confidence 5777763 22 778888 5554433333 3334 999999995 899863 23477888 444 22
Q ss_pred EEeeecCCc--ccccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEE
Q 017371 150 NFLSYVNGS--KLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 226 (372)
Q Consensus 150 ~l~~~~~~~--~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~ 226 (372)
.+....... ....|.++++++|| .+|+++.. ..+.|..+| ++++.... .+..+.++.+
T Consensus 112 ~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----------------~~~~v~viD-~t~~~~~~--~i~~~~~~~~ 172 (373)
T 2mad_H 112 DIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----------------AGPAVGLVV-QGGSSDDQ--LLSSPTCYHI 172 (373)
T ss_pred EEECCCccccccCCCccceEECCCCCEEEEEecC----------------CCCeEEEEE-CCCCEEeE--EcCCCceEEE
Confidence 222110000 01357899999999 58887531 246799999 88876433 0334455677
Q ss_pred ecCCCEEEEEeCCCCeEEEEEc
Q 017371 227 SRDEDYVVVCESWKFRCRKYWL 248 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~ 248 (372)
.++++..|++.+.++++..++.
T Consensus 173 ~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 173 HPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred EeCCCceEEEEcCCCCEEEEEC
Confidence 7888778888888888888887
No 147
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.79 E-value=1.3e-06 Score=81.45 Aligned_cols=101 Identities=13% Similarity=0.117 Sum_probs=66.8
Q ss_pred ceEEccCC-cEEEEeC-CCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCCCe
Q 017371 165 DVVEASDG-SLYFTVS-SSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFR 242 (372)
Q Consensus 165 ~l~~d~dG-~i~vtd~-~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~ 242 (372)
.+++++|| ++|++.. ....+ ......+.|+.+|.++++.......-. |.+++++|||++||+++. +.
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~--------~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~ 326 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEG--------THKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GN 326 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTT--------CTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SC
T ss_pred EEEEecCCCeEEEEEccCCCcc--------cccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--Ce
Confidence 37888874 6787643 10000 000124589999999887665444444 999999999999999885 78
Q ss_pred EEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC
Q 017371 243 CRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT 277 (372)
Q Consensus 243 i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~ 277 (372)
|..|+..+.++.....+. .....|.+++++++|+
T Consensus 327 v~v~D~~t~~l~~~~~i~-~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 327 VNVYDISQPEPKLLRTIE-GAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEECSSSSCEEEEEET-TSCSSEEEEEECCCSC
T ss_pred EEEEECCCCcceeeEEec-cCCCCcEEEEecCCCC
Confidence 999987654222222322 2334699999999985
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.79 E-value=1.2e-06 Score=77.47 Aligned_cols=178 Identities=12% Similarity=0.060 Sum_probs=111.3
Q ss_pred CCCccEEEcCCCcEEEEecCCeEEEEe--C-CceEEEEecC--CCcccCeEEcCCCCEEEEeC-----CCcEEEEc-CCC
Q 017371 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--D-GTWVNWKFID--SQTLVGLTSTKEGHLIICDN-----ANGLHKVS-EDG 147 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~~~g~i~~~~--~-g~~~~~~~~~--~~p~~gl~~d~dG~l~v~~~-----~~gv~~~~-~~g 147 (372)
....++++.++|..++...++.|+.++ + ++...+.... ..+. .+++.++|+.++... ...|+.++ .++
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 120 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNN-DHGISPDGALYAISDKVEFGKSAIYLLPSTGG 120 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCS-CCEECTTSSEEEEEECTTTSSCEEEEEETTCC
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccccccc-ceEECCCCCEEEEEEeCCCCcceEEEEECCCC
Confidence 357789999999766555688999999 5 5555443322 3345 899999997555433 23577777 444
Q ss_pred -cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEE
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVA 225 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~ 225 (372)
...+... .....+++.+||+ |+++... ...-.||.++..+++...+.........++
T Consensus 121 ~~~~~~~~------~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 179 (297)
T 2ojh_A 121 TPRLMTKN------LPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDIDSGVETRLTHGEGRNDGPD 179 (297)
T ss_dssp CCEECCSS------SSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEETTTCCEEECCCSSSCEEEEE
T ss_pred ceEEeecC------CCccceEECCCCCEEEEEECC---------------CCceEEEEEECCCCcceEcccCCCccccce
Confidence 4433211 1255678999996 4444221 122378888887777766555445567899
Q ss_pred EecCCCEEEEEeC--CCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEE
Q 017371 226 LSRDEDYVVVCES--WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 282 (372)
Q Consensus 226 ~~~dg~~l~v~~~--~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~ 282 (372)
++||++.++++.. +..+|+.++..+.. ...+. ........+.++++|+..+..
T Consensus 180 ~s~dg~~l~~~~~~~~~~~i~~~~~~~~~---~~~~~-~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 180 YSPDGRWIYFNSSRTGQMQIWRVRVDGSS---VERIT-DSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTSSC---EEECC-CCSEEEEEEEECTTSSEEEEE
T ss_pred ECCCCCEEEEEecCCCCccEEEECCCCCC---cEEEe-cCCcccCCeEECCCCCEEEEE
Confidence 9999998887753 44567777755432 22222 112234457889999754433
No 149
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.78 E-value=2.4e-05 Score=71.73 Aligned_cols=185 Identities=11% Similarity=0.106 Sum_probs=113.6
Q ss_pred CCCCCCCccEEEcCCCc-EEEEecCCeEEEEe--CCc-eEEEEecCCCcccCeEEcCCCCEEEEeCCCc-EEEEc-CCC-
Q 017371 75 EGSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG- 147 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~-~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~g-v~~~~-~~g- 147 (372)
.|......++++.++|. |..++.+|.|..|+ +++ ...+........ .+++.++|++.++....+ +..++ ..+
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVM-TCAYAPSGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEE-EEEECTTSSEEEEEETTCEEEEEETTTCS
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEE-EEEECCCCCEEEEEeCCCeEEEEECccCC
Confidence 34445667899999886 45566899999999 444 333333333455 899999998766654444 55565 332
Q ss_pred --cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cCcceE
Q 017371 148 --VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGV 224 (372)
Q Consensus 148 --~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~~~gi 224 (372)
..... ...+. ...+..+.+.+++.+..+ ..++.|..+|..+++......+. .....+
T Consensus 131 ~~~~~~~-~~~~h-~~~v~~~~~~~~~~l~s~------------------s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~ 190 (340)
T 1got_B 131 GNVRVSR-ELAGH-TGYLSCCRFLDDNQIVTS------------------SGDTTCALWDIETGQQTTTFTGHTGDVMSL 190 (340)
T ss_dssp BSCEEEE-EEECC-SSCEEEEEEEETTEEEEE------------------ETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CcceeEE-EecCC-CccEEEEEECCCCcEEEE------------------ECCCcEEEEECCCCcEEEEEcCCCCceEEE
Confidence 22221 11111 123456677777775543 24677888998877765544432 234678
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 225 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 225 ~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++|+++ ++++...++.|..+++...+ ....+. ........+++.++|++.++...
T Consensus 191 ~~~~~~~-~l~sg~~d~~v~~wd~~~~~--~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 191 SLAPDTR-LFVSGACDASAKLWDVREGM--CRQTFT-GHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTTCS--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EECCCCC-EEEEEeCCCcEEEEECCCCe--eEEEEc-CCcCCEEEEEEcCCCCEEEEEcC
Confidence 8999998 44555556778888875432 122232 22334667899999988777654
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.78 E-value=2.7e-06 Score=85.97 Aligned_cols=199 Identities=14% Similarity=0.083 Sum_probs=113.9
Q ss_pred CCCccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CC-----C-cE
Q 017371 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-ED-----G-VE 149 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~-----g-~~ 149 (372)
..+.++++.+++.+.++ .++.|+.++ +++...+....+... .+++.|||+..+......|+.++ .+ | ..
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~-~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETA-SLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCT-TCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCccccc-CCcCCCCCCEEEEEECCeEEEEecCcccccCCCcE
Confidence 35778999999666655 468999999 566655554445566 89999999754444445688888 66 6 43
Q ss_pred EEeeecCC----------cccccccceEEccCCc-EEEEeC--CC--CCCCccc----------ccc-cccccCCCeEEE
Q 017371 150 NFLSYVNG----------SKLRFANDVVEASDGS-LYFTVS--SS--KYLPHEY----------CLD-ILEGKPHGQLLK 203 (372)
Q Consensus 150 ~l~~~~~~----------~~~~~~~~l~~d~dG~-i~vtd~--~~--~~~~~~~----------~~~-~~~~~~~g~v~~ 203 (372)
.+...... ..+..+.++++.+||+ |+++.. +. .+..... ... .........|+.
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~ 239 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGI 239 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEE
Confidence 32211111 0011247899999996 444321 00 0000000 000 001123467999
Q ss_pred EeCCCCeEEEEeCCc---cCcceEEEecCCCEEEEEeCCC----CeEEEEEccCCCCcceeeec-cCCCC---CCceeEE
Q 017371 204 YDPSSNITTLVADGF---YFANGVALSRDEDYVVVCESWK----FRCRKYWLKGERKGKLETFA-ENLPG---APDNINL 272 (372)
Q Consensus 204 ~d~~t~~~~~~~~~~---~~~~gi~~~~dg~~l~v~~~~~----~~i~~~~~~g~~~~~~~~~~-~~~~g---~p~~i~~ 272 (372)
+|.++++...+.... .....++|+|||+.++++.... ..|+.+++.+.+ ...... ..... ....+++
T Consensus 240 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 240 YHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEECSSCCCCCSCCEE
T ss_pred EECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEccCCCeECccCCcee
Confidence 999988876654321 2345689999999888865433 378888876541 111111 11111 1356788
Q ss_pred cC--CCCEEEE
Q 017371 273 AP--DGTFWIA 281 (372)
Q Consensus 273 d~--~G~lwva 281 (372)
.+ ||.+.++
T Consensus 318 sp~~dg~~l~~ 328 (706)
T 2z3z_A 318 LPGSNNQFIWQ 328 (706)
T ss_dssp CTTCSSEEEEE
T ss_pred ecCCCCEEEEE
Confidence 88 8874443
No 151
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.76 E-value=6.7e-06 Score=76.81 Aligned_cols=229 Identities=14% Similarity=0.097 Sum_probs=139.0
Q ss_pred CCccEEEcCCCc-EEEEecCCeEEEEe-CCceE-EEEecCCCcccCeEEcCCCCEEEE-eCCCcEEEEc-CCC--cEEEe
Q 017371 80 HPEDASMDKNGV-IYTATRDGWIKRLQ-DGTWV-NWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFL 152 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~~g~i~~~~-~g~~~-~~~~~~~~p~~gl~~d~dG~l~v~-~~~~gv~~~~-~~g--~~~l~ 152 (372)
...++++.++|. |+++..+|.|..|+ +++.. .+........ .+++.++|+.+++ .....+..++ .++ ...+.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIV-SVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEE-EEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEE-EEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 456788998885 56666899999999 55533 3332333445 8999999975544 4445577788 566 33222
Q ss_pred eecCCc----------ccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-ccCc
Q 017371 153 SYVNGS----------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFA 221 (372)
Q Consensus 153 ~~~~~~----------~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~-~~~~ 221 (372)
...... ....+..+++.+++.++++. .++.|+.+|..+++....... ....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~g~i~~~d~~~~~~~~~~~~~~~~i 250 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPG------------------PKGAIFVYQITEKTPTGKLIGHHGPI 250 (425)
T ss_dssp CC---------------CCCBSCCEEEETTEEEEEC------------------GGGCEEEEETTCSSCSEEECCCSSCE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCEEEEEc------------------CCCeEEEEEcCCCceeeeeccCCCce
Confidence 111000 00116678888888766642 457799999876654433332 2234
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHH
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKH 301 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~ 301 (372)
..++++++++.++.+. .++.|..+++...+. ...+. ...+....+++.++| ++++...
T Consensus 251 ~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~-~~~~~i~~~~~~~~~-~l~~~~~----------------- 308 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSAS-DDGTLRIWHGGNGNS--QNCFY-GHSQSIVSASWVGDD-KVISCSM----------------- 308 (425)
T ss_dssp EEEEEETTTTEEEEEE-TTSCEEEECSSSBSC--SEEEC-CCSSCEEEEEEETTT-EEEEEET-----------------
T ss_pred EEEEECCCCCEEEEEc-CCCEEEEEECCCCcc--ceEec-CCCccEEEEEECCCC-EEEEEeC-----------------
Confidence 5789999999666655 456788888764321 12222 223346678899999 4444444
Q ss_pred HHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE-CC-EEEEEeCCCCeEEEEeC
Q 017371 302 VLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQL 371 (372)
Q Consensus 302 ~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~L~igs~~~~~i~~~~~ 371 (372)
.+.|..++. +++.+..+....+ .++.+... ++ .|+.++ ....|.++++
T Consensus 309 -----------------d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~-~dg~i~i~~~ 359 (425)
T 1r5m_A 309 -----------------DGSVRLWSLKQNTLLALSIVDGV----PIFAGRISQDGQKYAVAF-MDGQVNVYDL 359 (425)
T ss_dssp -----------------TSEEEEEETTTTEEEEEEECTTC----CEEEEEECTTSSEEEEEE-TTSCEEEEEC
T ss_pred -----------------CCcEEEEECCCCcEeEecccCCc----cEEEEEEcCCCCEEEEEE-CCCeEEEEEC
Confidence 457777774 5777777765433 36666665 34 455555 4567777765
No 152
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.75 E-value=7.8e-06 Score=78.06 Aligned_cols=178 Identities=11% Similarity=0.097 Sum_probs=109.0
Q ss_pred ccEEEcCCCcEEEEecCCeEEEEe--CCc----eEEEEecC---------------------------------------
Q 017371 82 EDASMDKNGVIYTATRDGWIKRLQ--DGT----WVNWKFID--------------------------------------- 116 (372)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~i~~~~--~g~----~~~~~~~~--------------------------------------- 116 (372)
.+++++++|.+.++..++.|..|+ +|+ +..|....
T Consensus 8 ~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (450)
T 2vdu_B 8 QNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRT 87 (450)
T ss_dssp CEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC---------------------------------------
T ss_pred EEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccccc
Confidence 468889999877777788899998 665 23333111
Q ss_pred ---------------CCcccCeEEcCCCCEE-EEeCC-CcEEEEc-C--CC--cEEEeeecCCcccccccceEEccCCcE
Q 017371 117 ---------------SQTLVGLTSTKEGHLI-ICDNA-NGLHKVS-E--DG--VENFLSYVNGSKLRFANDVVEASDGSL 174 (372)
Q Consensus 117 ---------------~~p~~gl~~d~dG~l~-v~~~~-~gv~~~~-~--~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i 174 (372)
+... ++++.++|+.+ ++... ..+..++ . ++ ...+...... ..+..+++.++|+.
T Consensus 88 ~~~~~~~~~~~~~~~~~v~-~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 88 AAKVPSPGLGAPPIYSYIR-NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFS---KRPNAISIAEDDTT 163 (450)
T ss_dssp ------------CCCCCEE-EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECS---SCEEEEEECTTSSE
T ss_pred CccccCCCCCCCccCCceE-EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCC---CCceEEEEcCCCCE
Confidence 0245 89999999864 54433 4466666 5 55 4443221111 24678999999976
Q ss_pred EEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEE-----EEeCCccCcceEEEecC---CCEEEEEeCCCCeEEEE
Q 017371 175 YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-----LVADGFYFANGVALSRD---EDYVVVCESWKFRCRKY 246 (372)
Q Consensus 175 ~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~-----~~~~~~~~~~gi~~~~d---g~~l~v~~~~~~~i~~~ 246 (372)
.++- ...+.++.++..+++.. .+.........++++|+ ++.++.+. .+..|..+
T Consensus 164 l~~~-----------------~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~d~~i~vw 225 (450)
T 2vdu_B 164 VIIA-----------------DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD-RDEHIKIS 225 (450)
T ss_dssp EEEE-----------------ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE-TTSCEEEE
T ss_pred EEEE-----------------eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc-CCCcEEEE
Confidence 5542 24678898987655432 11111233457899999 76555554 56678888
Q ss_pred EccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 247 WLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 247 ~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
++...+. ...+.....+....+++. +|++.++...
T Consensus 226 d~~~~~~--~~~~~~~h~~~v~~~~~s-d~~~l~s~~~ 260 (450)
T 2vdu_B 226 HYPQCFI--VDKWLFGHKHFVSSICCG-KDYLLLSAGG 260 (450)
T ss_dssp EESCTTC--EEEECCCCSSCEEEEEEC-STTEEEEEES
T ss_pred ECCCCce--eeeeecCCCCceEEEEEC-CCCEEEEEeC
Confidence 8864321 222232333456788899 8987776655
No 153
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.75 E-value=1.4e-05 Score=74.85 Aligned_cols=227 Identities=13% Similarity=0.107 Sum_probs=133.3
Q ss_pred CccEEEcCCCc-EEEEecCCeEEEEe--CCceEEEEec-CCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC-c-EEEe
Q 017371 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFI-DSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-V-ENFL 152 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~~~~~-~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g-~-~~l~ 152 (372)
..++++.++|. |.++..+|.|..|+ +++....... ..... .+++.++|+.+++... ..+..++ .++ . ..+.
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY-SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEE-EEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 34788999885 45566899999999 4544333222 23345 8999999986666444 4466777 666 2 2221
Q ss_pred eecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC-------C-ccCcce
Q 017371 153 SYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-------G-FYFANG 223 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~-------~-~~~~~g 223 (372)
. . ..+..+++.+ +|+++++-+ .++.|..+|..+++...... + ......
T Consensus 205 ~--~----~~v~~~~~~~~~~~~l~~~s-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 261 (393)
T 1erj_A 205 I--E----DGVTTVAVSPGDGKYIAAGS-----------------LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 261 (393)
T ss_dssp C--S----SCEEEEEECSTTCCEEEEEE-----------------TTSCEEEEETTTCCEEEEEC------CCCSSCEEE
T ss_pred c--C----CCcEEEEEECCCCCEEEEEc-----------------CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEE
Confidence 1 1 2345678887 787766532 46778888887766443321 1 122357
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEccCCCC---------ccee-eeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHh
Q 017371 224 VALSRDEDYVVVCESWKFRCRKYWLKGERK---------GKLE-TFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKIL 293 (372)
Q Consensus 224 i~~~~dg~~l~v~~~~~~~i~~~~~~g~~~---------~~~~-~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~ 293 (372)
++++++++.++.+ +.++.|..+++..... +... .+. ........+++.++|.+.++...
T Consensus 262 v~~~~~g~~l~s~-s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~--------- 330 (393)
T 1erj_A 262 VVFTRDGQSVVSG-SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSK--------- 330 (393)
T ss_dssp EEECTTSSEEEEE-ETTSEEEEEEC---------------CEEEEEE-CCSSCEEEEEECGGGCEEEEEET---------
T ss_pred EEECCCCCEEEEE-eCCCEEEEEECCCCCCcccccCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeC---------
Confidence 8999999866544 4566788887754211 0011 111 12223456778888876666554
Q ss_pred hcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE-------CCEEEEEeCCCCe
Q 017371 294 NSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-------DNHLYVISLTSNF 365 (372)
Q Consensus 294 ~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-------~g~L~igs~~~~~ 365 (372)
.+.|..+|. +|+.+..+....+ .+.++... ++.+.+..-....
T Consensus 331 -------------------------D~~v~iwd~~~~~~~~~l~~h~~----~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 331 -------------------------DRGVLFWDKKSGNPLLMLQGHRN----SVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp -------------------------TSEEEEEETTTCCEEEEEECCSS----CEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred -------------------------CCeEEEEECCCCeEEEEECCCCC----CEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 456777774 5777777765433 35555553 2455555445566
Q ss_pred EEEEeC
Q 017371 366 IGKVQL 371 (372)
Q Consensus 366 i~~~~~ 371 (372)
|.++++
T Consensus 382 i~iW~~ 387 (393)
T 1erj_A 382 ARIWKY 387 (393)
T ss_dssp EEEEEE
T ss_pred EEECcc
Confidence 666553
No 154
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.75 E-value=5.4e-06 Score=77.88 Aligned_cols=224 Identities=13% Similarity=0.054 Sum_probs=134.4
Q ss_pred EEcCCCc-EEEEecCCeEEEEe--CCceEEEEe-cCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cEEEeeecC
Q 017371 85 SMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKF-IDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSYVN 156 (372)
Q Consensus 85 ~~d~~G~-l~v~~~~g~i~~~~--~g~~~~~~~-~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~~l~~~~~ 156 (372)
++.++|. |.+++.+|.|..|+ .++...... ..+... .+++.++|+++++... ..+..++ .++ ...+...
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-- 180 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEIT-KLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH-- 180 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC--
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccE-EEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC--
Confidence 4556774 55666899999998 444443322 223445 8999999986665444 4477777 555 4444211
Q ss_pred CcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc------------------
Q 017371 157 GSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF------------------ 218 (372)
Q Consensus 157 ~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~------------------ 218 (372)
...+..+++.++|+..++-+ .++.|..+|..+++........
T Consensus 181 ---~~~v~~~~~~~~~~~l~s~~-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 240 (420)
T 3vl1_A 181 ---RATVTDIAIIDRGRNVLSAS-----------------LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDR 240 (420)
T ss_dssp ---SSCEEEEEEETTTTEEEEEE-----------------TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCS
T ss_pred ---CCcEEEEEEcCCCCEEEEEc-----------------CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcc
Confidence 13467889999998766532 4677888888777655544321
Q ss_pred -------cCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEecCchhHH
Q 017371 219 -------YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIKLDARRM 290 (372)
Q Consensus 219 -------~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~~~~~~~ 290 (372)
.....++++++++.++.+. .++.|..|++...+ ....+.....+....++++++|. +.++...
T Consensus 241 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~------ 311 (420)
T 3vl1_A 241 QLHEISTSKKNNLEFGTYGKYVIAGH-VSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYE------ 311 (420)
T ss_dssp SCGGGCCCCCCTTCSSCTTEEEEEEE-TTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEET------
T ss_pred eeeecccCcccceEEcCCCCEEEEEc-CCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeC------
Confidence 1223466788998665554 46678888886432 12222222233466789999997 5555544
Q ss_pred HHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC-C-cEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEE
Q 017371 291 KILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-G-TIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGK 368 (372)
Q Consensus 291 ~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~-g-~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~ 368 (372)
.+.|..+|.. + +.+..+....+. .++.+...++++++.......|..
T Consensus 312 ----------------------------dg~i~vwd~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~l~s~~~d~~v~i 360 (420)
T 3vl1_A 312 ----------------------------NGMLAQWDLRSPECPVGEFLINEGT---PINNVYFAAGALFVSSGFDTSIKL 360 (420)
T ss_dssp ----------------------------TSEEEEEETTCTTSCSEEEEESTTS---CEEEEEEETTEEEEEETTTEEEEE
T ss_pred ----------------------------CCeEEEEEcCCCcCchhhhhccCCC---CceEEEeCCCCEEEEecCCccEEE
Confidence 3567777743 3 334455432222 356666666666666656666766
Q ss_pred EeC
Q 017371 369 VQL 371 (372)
Q Consensus 369 ~~~ 371 (372)
+++
T Consensus 361 w~~ 363 (420)
T 3vl1_A 361 DII 363 (420)
T ss_dssp EEE
T ss_pred Eec
Confidence 654
No 155
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.74 E-value=1.5e-06 Score=88.29 Aligned_cols=136 Identities=10% Similarity=0.017 Sum_probs=87.2
Q ss_pred CCccEEEcCCCc-EEEEec-CC-----eEEEEe--CCceEEEEecCC-------------------------CcccCeEE
Q 017371 80 HPEDASMDKNGV-IYTATR-DG-----WIKRLQ--DGTWVNWKFIDS-------------------------QTLVGLTS 125 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~-~g-----~i~~~~--~g~~~~~~~~~~-------------------------~p~~gl~~ 125 (372)
.+.++++.+||. |+++.. +| .|+.++ +|+.+....... ... .+++
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~ 116 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV-DYQW 116 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC-CCEE
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc-eeEE
Confidence 577899999995 666665 77 899999 566554433211 135 8999
Q ss_pred cCCCCEEEEeCCCcEEEEc-CCCc--EEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeE
Q 017371 126 TKEGHLIICDNANGLHKVS-EDGV--ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQL 201 (372)
Q Consensus 126 d~dG~l~v~~~~~gv~~~~-~~g~--~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v 201 (372)
+|||+..+......|+.++ .++. +.. ..... ...+..+++.|||+ |.++ ..+.|
T Consensus 117 SpDg~~l~~~~~~~i~~~d~~~~~~~~~~--~l~~~-~~~~~~~~~SPDG~~la~~-------------------~~~~i 174 (741)
T 2ecf_A 117 SPDAQRLLFPLGGELYLYDLKQEGKAAVR--QLTHG-EGFATDAKLSPKGGFVSFI-------------------RGRNL 174 (741)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCSTTSCC--BCCCS-SSCEEEEEECTTSSEEEEE-------------------ETTEE
T ss_pred CCCCCEEEEEeCCcEEEEECCCCCcceEE--EcccC-CcccccccCCCCCCEEEEE-------------------eCCcE
Confidence 9999854443345688888 4331 111 00110 12456789999997 4443 13479
Q ss_pred EEEeCCCCeEEEEeCCccC-----------------cceEEEecCCCEEEEEeC
Q 017371 202 LKYDPSSNITTLVADGFYF-----------------ANGVALSRDEDYVVVCES 238 (372)
Q Consensus 202 ~~~d~~t~~~~~~~~~~~~-----------------~~gi~~~~dg~~l~v~~~ 238 (372)
+.+|.++++...+...... ..+++|+|||++|+++..
T Consensus 175 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 175 WVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp EEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred EEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 9999988877665432221 467999999998888753
No 156
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.73 E-value=5.8e-05 Score=68.72 Aligned_cols=182 Identities=13% Similarity=0.103 Sum_probs=111.3
Q ss_pred CCCCCCccEEEcCC----C-cEEEEecCCeEEEEe--CCceEE-EEe-c-CCCcccCeEEcCCCCEEEEeCC-CcEEEEc
Q 017371 76 GSVNHPEDASMDKN----G-VIYTATRDGWIKRLQ--DGTWVN-WKF-I-DSQTLVGLTSTKEGHLIICDNA-NGLHKVS 144 (372)
Q Consensus 76 g~~~~p~~i~~d~~----G-~l~v~~~~g~i~~~~--~g~~~~-~~~-~-~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~ 144 (372)
+.-....++++.++ + .|..|..|+.|..|+ +++... +.. . ..... .+++.+++.+.++... ..+..++
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~-~~~~~~~~~~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVV-SVDISHTLPIAASSSLDAHIRLWD 108 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECSSSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEE-EEEECCCCCEEEEEeCCCcEEEEE
Confidence 33345567777653 3 466677899888888 444332 211 1 12334 7888899987766544 4466777
Q ss_pred -CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC-CccC
Q 017371 145 -EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYF 220 (372)
Q Consensus 145 -~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~-~~~~ 220 (372)
.++ ...+... ...+..+++.++|+..++-. ..+.|..+|..+++...... ....
T Consensus 109 ~~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~g~-----------------~dg~v~i~~~~~~~~~~~~~~~~~~ 166 (321)
T 3ow8_A 109 LENGKQIKSIDAG-----PVDAWTLAFSPDSQYLATGT-----------------HVGKVNIFGVESGKKEYSLDTRGKF 166 (321)
T ss_dssp TTTTEEEEEEECC-----TTCCCCEEECTTSSEEEEEC-----------------TTSEEEEEETTTCSEEEEEECSSSC
T ss_pred CCCCCEEEEEeCC-----CccEEEEEECCCCCEEEEEc-----------------CCCcEEEEEcCCCceeEEecCCCce
Confidence 666 3333211 12456789999998777632 46788888887766544332 2334
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 221 ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 221 ~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
...++++||++++..+. .++.|..+++...+ ....+. ........++++++|++.++...
T Consensus 167 v~~~~~spdg~~lasg~-~dg~i~iwd~~~~~--~~~~~~-~h~~~v~~l~~spd~~~l~s~s~ 226 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGA-IDGIINIFDIATGK--LLHTLE-GHAMPIRSLTFSPDSQLLVTASD 226 (321)
T ss_dssp EEEEEECTTSSEEEEEE-TTSCEEEEETTTTE--EEEEEC-CCSSCCCEEEECTTSCEEEEECT
T ss_pred EEEEEECCCCCEEEEEc-CCCeEEEEECCCCc--EEEEEc-ccCCceeEEEEcCCCCEEEEEcC
Confidence 56789999999666554 45678888876432 112222 22234578999999987776654
No 157
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.73 E-value=1.6e-05 Score=72.91 Aligned_cols=224 Identities=12% Similarity=0.057 Sum_probs=138.3
Q ss_pred CccEEEcCCCcE-EEEecCCeEEEEe--CC--ceE---EEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC--cE
Q 017371 81 PEDASMDKNGVI-YTATRDGWIKRLQ--DG--TWV---NWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VE 149 (372)
Q Consensus 81 p~~i~~d~~G~l-~v~~~~g~i~~~~--~g--~~~---~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g--~~ 149 (372)
..++++.++|.+ .++..++.|..|+ .+ ..+ .+....+... .+.+.+++.++.+..+..+..++ .++ ..
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~ 178 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTT 178 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEE-EEEEEETTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEE-EEEECCCCcEEEEECCCcEEEEECCCCcEEE
Confidence 456788888854 4556888888888 22 122 1222223334 67787888877776666688888 666 33
Q ss_pred EEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cCcceEEEec
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVALSR 228 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~~~gi~~~~ 228 (372)
.+. +. ...+..+++.++|+++++-+ .++.|..+|..+++......+. ...+.++++|
T Consensus 179 ~~~----~h-~~~v~~~~~~~~~~~l~sg~-----------------~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p 236 (340)
T 1got_B 179 TFT----GH-TGDVMSLSLAPDTRLFVSGA-----------------CDASAKLWDVREGMCRQTFTGHESDINAICFFP 236 (340)
T ss_dssp EEC----CC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCSEEEEECCCSSCEEEEEECT
T ss_pred EEc----CC-CCceEEEEECCCCCEEEEEe-----------------CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC
Confidence 221 11 12467889999999887632 5678888998777655444432 3356899999
Q ss_pred CCCEEEEEeCCCCeEEEEEccCCCCcceeeecc-CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcC
Q 017371 229 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAE-NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYP 307 (372)
Q Consensus 229 dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~-~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p 307 (372)
+++.++.+ +.++.|..+++...+ ....+.. ........+++.++|++.++...
T Consensus 237 ~~~~l~s~-s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~----------------------- 290 (340)
T 1got_B 237 NGNAFATG-SDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYD----------------------- 290 (340)
T ss_dssp TSSEEEEE-ETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEET-----------------------
T ss_pred CCCEEEEE-cCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECC-----------------------
Confidence 99865554 456678888875431 1122211 11112456889999998887766
Q ss_pred ccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CC-EEEEEeCCCCeEEEE
Q 017371 308 KLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKV 369 (372)
Q Consensus 308 ~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~L~igs~~~~~i~~~ 369 (372)
.+.|..+| .+++.+..+....+ .++++... ++ .|..|+. ...|.++
T Consensus 291 -----------d~~i~vwd~~~~~~~~~~~~h~~----~v~~~~~s~dg~~l~s~s~-D~~i~iW 339 (340)
T 1got_B 291 -----------DFNCNVWDALKADRAGVLAGHDN----RVSCLGVTDDGMAVATGSW-DSFLKIW 339 (340)
T ss_dssp -----------TSEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSCEEEEET-TSCEEEE
T ss_pred -----------CCeEEEEEcccCcEeeEeecCCC----cEEEEEEcCCCCEEEEEcC-CccEEec
Confidence 46777777 45777777765443 46777775 34 4555553 3445443
No 158
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.71 E-value=4.8e-07 Score=84.38 Aligned_cols=86 Identities=5% Similarity=-0.147 Sum_probs=58.1
Q ss_pred CcEEEEec-CC----eEEEEe--CCceEEEEecCCCcccCeEEcCCC-CEEEEeC----------CCcEEEEc-CCC--c
Q 017371 90 GVIYTATR-DG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEG-HLIICDN----------ANGLHKVS-EDG--V 148 (372)
Q Consensus 90 G~l~v~~~-~g----~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG-~l~v~~~----------~~gv~~~~-~~g--~ 148 (372)
..+|+.+. ++ .|..+| ++++..-...+..| ++++++|| .+||++. ..-|..+| .++ .
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 46888873 33 788999 56654444455556 89999998 6999973 23488899 555 3
Q ss_pred EEEeeecCC-c---ccccccceEEccCC-cEEEEeC
Q 017371 149 ENFLSYVNG-S---KLRFANDVVEASDG-SLYFTVS 179 (372)
Q Consensus 149 ~~l~~~~~~-~---~~~~~~~l~~d~dG-~i~vtd~ 179 (372)
..+.. ++ . ....|.++++++|| .+|+++.
T Consensus 110 ~~I~v--~~~~~~~~g~~P~~ia~SpDGk~lyVan~ 143 (368)
T 1mda_H 110 ADIEL--PDAPRFSVGPRVHIIGNCASSACLLFFLF 143 (368)
T ss_dssp EEEEE--TTSCSCCBSCCTTSEEECTTSSCEEEEEC
T ss_pred EEEEC--CCccccccCCCcceEEEcCCCCEEEEEcc
Confidence 33321 21 1 12468899999999 6999874
No 159
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.71 E-value=6.6e-07 Score=82.82 Aligned_cols=184 Identities=14% Similarity=0.114 Sum_probs=108.1
Q ss_pred ccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC--CeEEEE-eCC------ccCcceEEEec--C
Q 017371 161 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS--NITTLV-ADG------FYFANGVALSR--D 229 (372)
Q Consensus 161 ~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t--~~~~~~-~~~------~~~~~gi~~~~--d 229 (372)
..+.+|+++++|.+|++... +|.-- ..+.....|+|+++|+++ .+.+.+ ..+ ...|.|+.+.+ |
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~-~~pg~----~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGL-KYPGI----MSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp SCCCEEEECTTSEEEEEECC-C---------------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred CCcceeEEcCCCeEEEEecc-ccCCC----cccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 46789999999999998521 11100 001113578999999873 344432 222 23688999876 3
Q ss_pred CC-EEEEEeCC--CCeEE--EEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHH
Q 017371 230 ED-YVVVCESW--KFRCR--KYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLA 304 (372)
Q Consensus 230 g~-~l~v~~~~--~~~i~--~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~ 304 (372)
++ +||+++.. +.+|. +++.++....-...+.......|+.+++|++|++|+++..- ...|..+. ..
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~--------ftd~~~~~-~e 195 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY--------FIDPYLKS-WE 195 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS--------CSSHHHHH-HH
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE--------eCCccccc-ch
Confidence 43 79999876 34544 45444332222222222233468999999999999998631 11121111 11
Q ss_pred hcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEE-C-CEEEEEeCCCCeEEEEeCC
Q 017371 305 AYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQV-D-NHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 305 ~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~-~-g~L~igs~~~~~i~~~~~~ 372 (372)
.+ ...+.+.|+++++. +...... + +..+.+++.. + .+||+++...+.|.+++++
T Consensus 196 ~~--------~~~~~g~vyr~d~~-~~~~~~~---~--l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 196 MH--------LGLAWSFVTYYSPN-DVRVVAE---G--FDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp HH--------TTCCCEEEEEECTT-CCEEEEE---E--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred hh--------ccCCccEEEEEECC-eEEEeec---C--CcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 00 12346899999984 4332221 2 4456677775 3 5899999999999998863
No 160
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.70 E-value=3.2e-06 Score=79.04 Aligned_cols=178 Identities=11% Similarity=0.066 Sum_probs=111.5
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCceEE-EEecCCC---------------cccCeEEcCCCCEEEEeCCCc
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVN-WKFIDSQ---------------TLVGLTSTKEGHLIICDNANG 139 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~-~~~~~~~---------------p~~gl~~d~dG~l~v~~~~~g 139 (372)
....++++.++|. |++++.+|.|..|+ +++... +...... .. .+.+.+++.++++.....
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 228 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGV-DVEWVDDDKFVIPGPKGA 228 (425)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBS-CCEEEETTEEEEECGGGC
T ss_pred ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceee-EEEEcCCCEEEEEcCCCe
Confidence 3566789988885 66667899999999 454332 2221111 55 888988888777765556
Q ss_pred EEEEc-CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC
Q 017371 140 LHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 216 (372)
Q Consensus 140 v~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~ 216 (372)
+..++ .++ ...+... ...+..+++.++|+.+++-. .++.|..+|..+++......
T Consensus 229 i~~~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~~~ 286 (425)
T 1r5m_A 229 IFVYQITEKTPTGKLIGH-----HGPISVLEFNDTNKLLLSAS-----------------DDGTLRIWHGGNGNSQNCFY 286 (425)
T ss_dssp EEEEETTCSSCSEEECCC-----SSCEEEEEEETTTTEEEEEE-----------------TTSCEEEECSSSBSCSEEEC
T ss_pred EEEEEcCCCceeeeeccC-----CCceEEEEECCCCCEEEEEc-----------------CCCEEEEEECCCCccceEec
Confidence 88888 555 3333211 12456889999998666532 46778888877665433333
Q ss_pred C-ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 217 G-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 217 ~-~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
. -.....+++++++ ++++...++.|..|++...+ ....+. ........+++.++|++.++...
T Consensus 287 ~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~ 350 (425)
T 1r5m_A 287 GHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNT--LLALSI-VDGVPIFAGRISQDGQKYAVAFM 350 (425)
T ss_dssp CCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTE--EEEEEE-CTTCCEEEEEECTTSSEEEEEET
T ss_pred CCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCc--EeEecc-cCCccEEEEEEcCCCCEEEEEEC
Confidence 2 2334678899998 44444556789888876432 112222 22334667889999987666554
No 161
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.70 E-value=3.6e-05 Score=69.33 Aligned_cols=151 Identities=10% Similarity=0.088 Sum_probs=95.9
Q ss_pred CCCCCCccEEEcCCCc-EEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--
Q 017371 76 GSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-- 147 (372)
Q Consensus 76 g~~~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g-- 147 (372)
+.-....++++.++|. |..+..+|.|..|+ +++. ..+........ .+++.++|+++++... ..+..++ .++
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEE-EEEEeCCCCEEEEECCCCEEEEEECCCCcE
Confidence 3334677899999996 45556899999999 4443 33332223334 8889999986666444 4477777 566
Q ss_pred cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC-eEEEEeCCc-cCcceEE
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVADGF-YFANGVA 225 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~-~~~~~~~~~-~~~~gi~ 225 (372)
...+... ...+..+++.+++.+.++-+ .++.|..+|..++ .......+. .....++
T Consensus 90 ~~~~~~h-----~~~v~~~~~~~~~~~l~sgs-----------------~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 90 VVDFEAH-----PDYIRSIAVHPTKPYVLSGS-----------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147 (304)
T ss_dssp EEEEECC-----SSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEEGGGTTEEEEEECCCCSCEEEEE
T ss_pred EEEEeCC-----CCcEEEEEEcCCCCEEEEEC-----------------CCCeEEEEECCCCcchhhhhcccCCcEEEEE
Confidence 3333211 13567899999998777632 5677888887655 333333332 3346788
Q ss_pred Eec-CCCEEEEEeCCCCeEEEEEccC
Q 017371 226 LSR-DEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 226 ~~~-dg~~l~v~~~~~~~i~~~~~~g 250 (372)
++| +++ ++++...++.|..+++..
T Consensus 148 ~~p~~~~-~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 148 FNPKDPS-TFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp ECTTCTT-EEEEEETTSEEEEEETTC
T ss_pred ECCCCCC-EEEEEeCCCeEEEEECCC
Confidence 998 455 555555677788888754
No 162
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.68 E-value=2.5e-05 Score=73.67 Aligned_cols=149 Identities=13% Similarity=0.123 Sum_probs=95.8
Q ss_pred CCCCccEEEcCCCcEE-EEecCCeEEEEe--CCceEE-EEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cE
Q 017371 78 VNHPEDASMDKNGVIY-TATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VE 149 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l~-v~~~~g~i~~~~--~g~~~~-~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~ 149 (372)
-....++++.+++.+. .+..+|.|..|+ +++... +....+... .+++.++|+++++... .-+..++ .++ ..
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~-~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ-DISFDHSGKLLASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEE-EEEECTTSSEEEEEETTSCCCEEETTSSCEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE
Confidence 3456688999988654 555899999999 555433 332233445 8999999987766544 3466676 443 22
Q ss_pred EEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-ccCcceEEEec
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSR 228 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~-~~~~~gi~~~~ 228 (372)
.+ .+. ...+..+++.++|+..++-+ .++.|..+|..+++......+ ......+++++
T Consensus 187 ~~----~~h-~~~V~~v~~~p~~~~l~s~s-----------------~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~ 244 (410)
T 1vyh_C 187 TM----HGH-DHNVSSVSIMPNGDHIVSAS-----------------RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ 244 (410)
T ss_dssp CC----CCC-SSCEEEEEECSSSSEEEEEE-----------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred EE----cCC-CCCEEEEEEeCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEEeCCCccEEEEEECC
Confidence 22 111 13567899999998777532 577899999887765443332 23345678999
Q ss_pred CCCEEEEEeCCCCeEEEEEccC
Q 017371 229 DEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 229 dg~~l~v~~~~~~~i~~~~~~g 250 (372)
+++.++.+ ..++.|..+++..
T Consensus 245 ~g~~l~s~-s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 245 DGTLIASC-SNDQTVRVWVVAT 265 (410)
T ss_dssp TSSEEEEE-ETTSCEEEEETTT
T ss_pred CCCEEEEE-cCCCeEEEEECCC
Confidence 99855444 4566788787754
No 163
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.67 E-value=9e-05 Score=66.62 Aligned_cols=230 Identities=15% Similarity=0.095 Sum_probs=134.4
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cEE
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VEN 150 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~~ 150 (372)
....++++.++|. |..+..+|.|..|+ +++. ..+........ .+++.++++++++... ..+..++ .++ ...
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 4567789999885 45566899999999 4543 33333334445 8899999987666444 4577788 555 333
Q ss_pred EeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CC-ccCcceEEEec
Q 017371 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DG-FYFANGVALSR 228 (372)
Q Consensus 151 l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~-~~~~~gi~~~~ 228 (372)
+... ...+..+++.++|++.++-+ .++.|..+|..+++..... .. ......++++|
T Consensus 145 ~~~~-----~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 145 LPAH-----SDPVSAVHFNRDGSLIVSSS-----------------YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 202 (312)
T ss_dssp ECCC-----SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT
T ss_pred ecCC-----CCcEEEEEEcCCCCEEEEEe-----------------CCCcEEEEECCCCceeeEEeccCCCceEEEEECC
Confidence 3111 12456789999998776532 4678889998776643322 22 22235688999
Q ss_pred CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCC-CCCceeEE-cCCCCEEEEEecCchhHHHHhhcchhHHHHHHhc
Q 017371 229 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLP-GAPDNINL-APDGTFWIAIIKLDARRMKILNSSKLIKHVLAAY 306 (372)
Q Consensus 229 dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~-g~p~~i~~-d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~ 306 (372)
++++++.+. .++.|..|++...+ ....+..... ...-.... .++|.+.++...
T Consensus 203 ~~~~l~~~~-~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~---------------------- 257 (312)
T 4ery_A 203 NGKYILAAT-LDNTLKLWDYSKGK--CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE---------------------- 257 (312)
T ss_dssp TSSEEEEEE-TTTEEEEEETTTTE--EEEEECSSCCSSSCCCEEEECSSSCEEEECCT----------------------
T ss_pred CCCEEEEEc-CCCeEEEEECCCCc--EEEEEEecCCceEEEEEEEEeCCCcEEEEECC----------------------
Confidence 999766654 46678888876432 1122221111 01111222 244555444433
Q ss_pred CccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE--CCEEEEEeC-CCCeEEEEeCC
Q 017371 307 PKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISL-TSNFIGKVQLS 372 (372)
Q Consensus 307 p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~-~~~~i~~~~~~ 372 (372)
.+.|..+|. +++.+..+....+ .+..+... +..|..++. ....|..++.|
T Consensus 258 ------------dg~i~vwd~~~~~~~~~~~~h~~----~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 258 ------------DNLVYIWNLQTKEIVQKLQGHTD----VVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ------------TSCEEEEETTTCCEEEEECCCSS----CEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ------------CCEEEEEECCCchhhhhhhccCC----cEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 456666773 4677777754433 35666665 345666665 34556666543
No 164
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.66 E-value=2.2e-06 Score=87.08 Aligned_cols=198 Identities=12% Similarity=0.054 Sum_probs=111.1
Q ss_pred CccEEEcCCCc-EEEEecCCeEEEEe--CC---ceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC-cEEEe
Q 017371 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DG---TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFL 152 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~~~g~i~~~~--~g---~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g-~~~l~ 152 (372)
..++++.+||. |+++. ++.|+.++ ++ +.+.+....+... .+++.|||+..+......|+.++ .+| ...+.
T Consensus 111 v~~~~~SpDg~~l~~~~-~~~i~~~d~~~~~~~~~~~l~~~~~~~~-~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPL-GGELYLYDLKQEGKAAVRQLTHGEGFAT-DAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp SCCCEECTTSSEEEEEE-TTEEEEEESSSCSTTSCCBCCCSSSCEE-EEEECTTSSEEEEEETTEEEEEETTTTEEEECC
T ss_pred cceeEECCCCCEEEEEe-CCcEEEEECCCCCcceEEEcccCCcccc-cccCCCCCCEEEEEeCCcEEEEecCCCCEEEec
Confidence 46789999996 44444 48899999 55 5554444334556 89999999844443345688888 555 43332
Q ss_pred eecCCc------------ccccccceEEccCCc-EEEEeCC-CCCCC-------------cccccc-cccccCCCeEEEE
Q 017371 153 SYVNGS------------KLRFANDVVEASDGS-LYFTVSS-SKYLP-------------HEYCLD-ILEGKPHGQLLKY 204 (372)
Q Consensus 153 ~~~~~~------------~~~~~~~l~~d~dG~-i~vtd~~-~~~~~-------------~~~~~~-~~~~~~~g~v~~~ 204 (372)
...... .+..+.++++.+||+ |+++... ..... ....+. ..+......|+.+
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 211100 011246799999996 6655221 00000 000000 0000112378899
Q ss_pred eCCC-CeEEEEeCC---ccCcceEEEecCCCEEEEEeC----CCCeEEEEEccCCCCcceeeeccCCCC---CCceeEEc
Q 017371 205 DPSS-NITTLVADG---FYFANGVALSRDEDYVVVCES----WKFRCRKYWLKGERKGKLETFAENLPG---APDNINLA 273 (372)
Q Consensus 205 d~~t-~~~~~~~~~---~~~~~gi~~~~dg~~l~v~~~----~~~~i~~~~~~g~~~~~~~~~~~~~~g---~p~~i~~d 273 (372)
|.++ ++...+... ......++| |||+.|+++.. ....|+.+++.+.+... .+.....+ ....+++.
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV--LAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE--EEEEECSSCCCCCSCCEEC
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE--EEEcCCCCcCCcCCceEEC
Confidence 9888 776655422 223457889 99998887653 23468888876543221 11111111 23578899
Q ss_pred CCCCEEEEEe
Q 017371 274 PDGTFWIAII 283 (372)
Q Consensus 274 ~~G~lwva~~ 283 (372)
+||+++++..
T Consensus 346 pdg~~~~~~~ 355 (741)
T 2ecf_A 346 DDGSILWSSE 355 (741)
T ss_dssp TTSCEEEEEC
T ss_pred CCCeEEEEec
Confidence 9998555443
No 165
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.65 E-value=2.1e-05 Score=80.49 Aligned_cols=229 Identities=9% Similarity=0.055 Sum_probs=136.7
Q ss_pred CCCCccEEEcCCCc-EEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cE
Q 017371 78 VNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VE 149 (372)
Q Consensus 78 ~~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~ 149 (372)
-....++++.++|. |.++..+|.|..|+ +++. ..+....+... ++++.++|+++++... ..+..++ .++ ..
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 34678899999985 55666899999999 5543 33333334445 9999999986555444 4477777 566 33
Q ss_pred EEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC-eEEEEeCC-ccCcceEEEe
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVADG-FYFANGVALS 227 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~-~~~~~~~~-~~~~~gi~~~ 227 (372)
.+.. .. ..+..+++.++|...++- ..++.|..+|.+++ .......+ -.....++++
T Consensus 92 ~~~~-~~----~~v~~~~~s~~~~~l~~~-----------------~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~ 149 (814)
T 3mkq_A 92 DFEA-HP----DYIRSIAVHPTKPYVLSG-----------------SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (814)
T ss_dssp EEEC-CS----SCEEEEEECSSSSEEEEE-----------------ETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEE
T ss_pred EEec-CC----CCEEEEEEeCCCCEEEEE-----------------cCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEE
Confidence 3321 11 246789999999755542 24677888887655 33333332 2334678899
Q ss_pred c-CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcC--CCCEEEEEecCchhHHHHhhcchhHHHHHH
Q 017371 228 R-DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP--DGTFWIAIIKLDARRMKILNSSKLIKHVLA 304 (372)
Q Consensus 228 ~-dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~--~G~lwva~~~~~~~~~~~~~~~~~~r~~~~ 304 (372)
| +++ .+++.+.++.|..+++.+.... ..+..........++..+ +|++.++...
T Consensus 150 p~~~~-~l~~~~~dg~v~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-------------------- 206 (814)
T 3mkq_A 150 PKDPS-TFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLPDKPYMITASD-------------------- 206 (814)
T ss_dssp TTEEE-EEEEEETTSEEEEEETTCSSCS--EEEECCCTTCCCEEEECCSTTCCEEEEECT--------------------
T ss_pred cCCCC-EEEEEeCCCeEEEEECCCCcce--eEEecCCCCCEEEEEEEECCCCCEEEEEeC--------------------
Confidence 9 666 4445555678888887653222 122222223456677877 8877666654
Q ss_pred hcCccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CC-EEEEEeCCCCeEEEEeC
Q 017371 305 AYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQL 371 (372)
Q Consensus 305 ~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~L~igs~~~~~i~~~~~ 371 (372)
.+.|..++ .+++.+..+....+ .++++... ++ .|..++ ....|.++++
T Consensus 207 --------------dg~i~~~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~-~dg~v~vwd~ 257 (814)
T 3mkq_A 207 --------------DLTIKIWDYQTKSCVATLEGHMS----NVSFAVFHPTLPIIISGS-EDGTLKIWNS 257 (814)
T ss_dssp --------------TSEEEEEETTTTEEEEEEECCSS----CEEEEEECSSSSEEEEEE-TTSCEEEEET
T ss_pred --------------CCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEe-CCCeEEEEEC
Confidence 35666666 34666666654333 35555554 33 344444 3345555553
No 166
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.65 E-value=4.8e-06 Score=75.51 Aligned_cols=210 Identities=14% Similarity=0.097 Sum_probs=130.8
Q ss_pred CccEEEcCCCcEEEEe-c-------------CCeEEEEe-CCc-eEEEEecCCCcccCeEEcCC-CCEEEEe---CC-Cc
Q 017371 81 PEDASMDKNGVIYTAT-R-------------DGWIKRLQ-DGT-WVNWKFIDSQTLVGLTSTKE-GHLIICD---NA-NG 139 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~-~-------------~g~i~~~~-~g~-~~~~~~~~~~p~~gl~~d~d-G~l~v~~---~~-~g 139 (372)
+..|.++ ++.||..+ . .+.|++++ +|. .+.+... . +..+.++ +.||.++ .. ..
T Consensus 57 ~~~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~----~-~~~~s~~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 57 AMYINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD----P-CIYASLIGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEEEC-SSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS----C-EEEEEEETTEEEEEEESSSSCEE
T ss_pred eeeEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC----C-ccEEEEeCCEEEEEeecCCCCce
Confidence 3445554 45777775 3 25789999 554 3333321 1 3334434 4688887 22 45
Q ss_pred EEEEcCCC--cEEEeeecCCcccccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC
Q 017371 140 LHKVSEDG--VENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 216 (372)
Q Consensus 140 v~~~~~~g--~~~l~~~~~~~~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~ 216 (372)
|++++.+| .+.+... .. .+++++| +||+++. ....|++++.+++..+.+..
T Consensus 131 Iy~~~~dGs~~~~lt~~-~~--------~~~~~~g~~iy~t~~-----------------g~~~Iy~~~l~g~~~~~l~~ 184 (302)
T 3s25_A 131 LYRIRIDGEEKKKIKNH-YL--------FTCNTSDRYFYYNNP-----------------KNGQLYRYDTASQSEALFYD 184 (302)
T ss_dssp EEEEETTSCCCEEEESS-CC--------CCSEEETTEEEEECT-----------------TTCCEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCCeEEEeCC-Cc--------eEeeEECCEEEEEeC-----------------CCceEEEEECCCCCEEEEeC
Confidence 88888555 5555432 11 2334444 7998854 35679999998777777655
Q ss_pred CccCcceEEEecCCCEEEEEeCCC-CeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCC-CEEEEEecCchhHHHHhh
Q 017371 217 GFYFANGVALSRDEDYVVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILN 294 (372)
Q Consensus 217 ~~~~~~gi~~~~dg~~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwva~~~~~~~~~~~~~ 294 (372)
+ +....++|+++++|+++... .+|++.+++|.. ...+.+.. .| .+|++| .||.+....
T Consensus 185 ~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~---~~~Lt~~~--~~---~~~~~g~~Iy~~~~~~--------- 244 (302)
T 3s25_A 185 C---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN---PVVLTEAN--IE---HYNVYGSLIFYQRGGD--------- 244 (302)
T ss_dssp S---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC---CEECSCSC--EE---EEEEETTEEEEEECSS---------
T ss_pred C---CccceeeecCCEEEEEEcCCCcEEEEEECCCCC---eEEEeCCC--cc---eEEECCCEEEEEECCC---------
Confidence 3 22345679999999998754 689999998853 23333221 12 355556 355443321
Q ss_pred cchhHHHHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeCC
Q 017371 295 SSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 295 ~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~~ 372 (372)
...|.+++.+|...+.+... . ...+...++.||........|.++++|
T Consensus 245 ------------------------~~~i~~~~~DG~~r~~l~~~--~----~~~i~i~~d~Iy~td~~~~~i~~~~~d 292 (302)
T 3s25_A 245 ------------------------NPALCVVKNDGTGFKELAKG--E----FCNINVTSQYVYFTDFVSNKEYCTSTQ 292 (302)
T ss_dssp ------------------------SCEEEEEETTSCCCEEEEES--C----EEEEEECSSEEEEEETTTCCEEEEESS
T ss_pred ------------------------CcEEEEEECCCCccEEeeCC--c----cceEEEeCCEEEEEECCCCeEEEEECC
Confidence 35788899898765555432 2 235677899999999998889998875
No 167
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.64 E-value=1.1e-05 Score=75.06 Aligned_cols=186 Identities=15% Similarity=0.070 Sum_probs=112.8
Q ss_pred CccEEEcCCCc-EEEEe--cCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCCcEEEeee
Q 017371 81 PEDASMDKNGV-IYTAT--RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDGVENFLSY 154 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~--~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g~~~l~~~ 154 (372)
...+++.|||. +.+++ .++.|..|+ +++........+... ++++.|||+++++....++.+++ .++.......
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE-EEEEccCCceEEeccceeEEEEEeccCcceeeee
Confidence 45689999996 45555 578888888 554433333345566 99999999988776667788888 5562211111
Q ss_pred cCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE-----EeCCccCcceEEEecC
Q 017371 155 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-----VADGFYFANGVALSRD 229 (372)
Q Consensus 155 ~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~-----~~~~~~~~~gi~~~~d 229 (372)
..+ ....+..+++.++|+..++-+. .......++.+|...+.... +.......+.++|+||
T Consensus 215 ~~~-~~~~v~~v~fspdg~~l~~~s~-------------d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spd 280 (365)
T 4h5i_A 215 DFD-KNWSLSKINFIADDTVLIAASL-------------KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMK 280 (365)
T ss_dssp CCC-TTEEEEEEEEEETTEEEEEEEE-------------SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTT
T ss_pred cCC-CCCCEEEEEEcCCCCEEEEEec-------------CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCC
Confidence 111 1234678899999987775321 01111245556654443322 2222333457899999
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
|++|..+ +.++.|..+++...+ ....+.....+....+++.+||++.++...
T Consensus 281 g~~lasg-s~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 281 GELAVLA-SNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp SCEEEEE-ETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred CCceEEE-cCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 9955544 456678888875431 122333233344678999999998877655
No 168
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.64 E-value=0.00015 Score=67.47 Aligned_cols=259 Identities=10% Similarity=0.025 Sum_probs=138.4
Q ss_pred CCCCCCCccEEEcCCC-cEEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CC--
Q 017371 75 EGSVNHPEDASMDKNG-VIYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-ED-- 146 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G-~l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~-- 146 (372)
.|.-....++++.++| .|..++.||.|..|+ +++. ..+........ .+++.++|++.++... ..+..++ ..
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~-~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM-ECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCC-CCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEE-EEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 3444456788999888 466677899999999 4543 33333333455 8999999987766443 3344444 21
Q ss_pred ---C-c---EEEee-e--cCCccccc--ccce-EEccCCcEEEEeCCCCCCC----------c-cc----------cccc
Q 017371 147 ---G-V---ENFLS-Y--VNGSKLRF--ANDV-VEASDGSLYFTVSSSKYLP----------H-EY----------CLDI 192 (372)
Q Consensus 147 ---g-~---~~l~~-~--~~~~~~~~--~~~l-~~d~dG~i~vtd~~~~~~~----------~-~~----------~~~~ 192 (372)
+ . ..+.. . .....+.. ...+ .-..||.|.+-|....... + .. ...+
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 221 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMF 221 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEE
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEE
Confidence 1 0 00100 0 00000000 1112 2345677666554321000 0 00 0112
Q ss_pred ccccCCCeEEEEeCCC-Ce-EEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC------CC
Q 017371 193 LEGKPHGQLLKYDPSS-NI-TTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN------LP 264 (372)
Q Consensus 193 ~~~~~~g~v~~~d~~t-~~-~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~------~~ 264 (372)
..+..++.|..+|... ++ ...+...-...+.++++|+++. +++.+.+..|..+++...+ ....+... ..
T Consensus 222 ~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~ 298 (380)
T 3iz6_a 222 ISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQR-FGTGSDDGTCRLFDMRTGH--QLQVYNREPDRNDNEL 298 (380)
T ss_dssp EEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSE-EEEECSSSCEEEEETTTTE--EEEEECCCCSSSCCSS
T ss_pred EEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCe-EEEEcCCCeEEEEECCCCc--EEEEeccccccccccc
Confidence 2344567777788642 22 2222222334578999999984 4555567778888876432 11122111 11
Q ss_pred CCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCee
Q 017371 265 GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLM 343 (372)
Q Consensus 265 g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~ 343 (372)
.....+++.++|++.++... .+.|..+|. .++.+..+........
T Consensus 299 ~~v~~~~~s~~g~~l~~g~~----------------------------------dg~i~vwd~~~~~~~~~~~~~~~~h~ 344 (380)
T 3iz6_a 299 PIVTSVAFSISGRLLFAGYS----------------------------------NGDCYVWDTLLAEMVLNLGTLQNSHE 344 (380)
T ss_dssp CSCSEEEECSSSSEEEEECT----------------------------------TSCEEEEETTTCCEEEEECCSCSSCC
T ss_pred CceEEEEECCCCCEEEEEEC----------------------------------CCCEEEEECCCCceEEEEecccCCCC
Confidence 13467899999998887765 456777774 4666666643222223
Q ss_pred ccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 344 SFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 344 ~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
..++++... +|...+.......|.++++
T Consensus 345 ~~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 345 GRISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred CceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 457777775 4544444445566777665
No 169
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.63 E-value=6.1e-05 Score=70.50 Aligned_cols=180 Identities=12% Similarity=0.032 Sum_probs=110.4
Q ss_pred CCCccEEEcCCCcEEEEecCCeEEEEe--CCceEE-EEecC------------------CCcccCeEEcCCCCEEEEeCC
Q 017371 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVN-WKFID------------------SQTLVGLTSTKEGHLIICDNA 137 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~-~~~~~------------------~~p~~gl~~d~dG~l~v~~~~ 137 (372)
....++++.++|.+.++..++.+..|+ +|+... +.... .... .+++.++|+++++...
T Consensus 65 ~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR-SVCFSPDGKFLATGAE 143 (393)
T ss_dssp SCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEE-EEEECTTSSEEEEEET
T ss_pred CEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEE-EEEECCCCCEEEEEcC
Confidence 356789999999876665567787787 554322 21100 0134 7899999987666444
Q ss_pred -CcEEEEc-CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE
Q 017371 138 -NGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 213 (372)
Q Consensus 138 -~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~ 213 (372)
..+..++ .++ ...+ .+. ...+..+++.++|+..++-+ .++.|..+|..+++...
T Consensus 144 d~~i~iwd~~~~~~~~~~----~~h-~~~v~~~~~~p~~~~l~s~s-----------------~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMIL----QGH-EQDIYSLDYFPSGDKLVSGS-----------------GDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSCEEEEETTTTEEEEEE----CCC-SSCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEEEE----ccC-CCCEEEEEEcCCCCEEEEec-----------------CCCcEEEEECCCCeeEE
Confidence 4477777 555 2222 111 12467899999998777532 56789999988887655
Q ss_pred EeCCccCcceEEEec-CCCEEEEEeCCCCeEEEEEccCCCCcceeeec------cCCCCCCceeEEcCCCCEEEEEec
Q 017371 214 VADGFYFANGVALSR-DEDYVVVCESWKFRCRKYWLKGERKGKLETFA------ENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 214 ~~~~~~~~~gi~~~~-dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~------~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
..........+++++ +++.+. +...++.|..+++...+.. ..+. .........++++++|.+.++...
T Consensus 202 ~~~~~~~v~~~~~~~~~~~~l~-~~s~d~~v~iwd~~~~~~~--~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 202 TLSIEDGVTTVAVSPGDGKYIA-AGSLDRAVRVWDSETGFLV--ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp EEECSSCEEEEEECSTTCCEEE-EEETTSCEEEEETTTCCEE--EEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEcCCCcEEEEEECCCCCEEE-EEcCCCcEEEEECCCCcEE--EeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 444334456788998 777554 4445667888887543211 1111 011223456888999987666543
No 170
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.63 E-value=1.7e-05 Score=73.64 Aligned_cols=237 Identities=8% Similarity=-0.044 Sum_probs=142.6
Q ss_pred CCCccEEEcCC----C----cEEEEecCCeEEEEe--CCc------eEEEEec-----CCCcccCeEEc----CCCCE-E
Q 017371 79 NHPEDASMDKN----G----VIYTATRDGWIKRLQ--DGT------WVNWKFI-----DSQTLVGLTST----KEGHL-I 132 (372)
Q Consensus 79 ~~p~~i~~d~~----G----~l~v~~~~g~i~~~~--~g~------~~~~~~~-----~~~p~~gl~~d----~dG~l-~ 132 (372)
....++++.++ | .|+++..+|.|..|+ +++ ...+... ..... .+++. ++|+. +
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l 141 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW-ALKWGASNDRLLSHRL 141 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE-EEEEECCC----CEEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEE-EEEEeeccCCCCceEE
Confidence 34577888887 7 455566899999988 444 4444332 24455 89999 89976 5
Q ss_pred EEe-CCCcEEEEc-CC------C--cE-----EEeee--cCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccc
Q 017371 133 ICD-NANGLHKVS-ED------G--VE-----NFLSY--VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEG 195 (372)
Q Consensus 133 v~~-~~~gv~~~~-~~------g--~~-----~l~~~--~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~ 195 (372)
++. ....+..++ .. + .. .+... ........+..+++.++| ++++-
T Consensus 142 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~----------------- 203 (397)
T 1sq9_A 142 VATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATG----------------- 203 (397)
T ss_dssp EEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEE-----------------
T ss_pred EEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEE-----------------
Confidence 554 334477777 44 3 33 33210 001112356789999999 55542
Q ss_pred cCCCeEEEEeCCCCeEEEEeCC-------ccCcceEEEecCCCEEEEEeCCC---CeEEEEEccCCCCcceeeeccC---
Q 017371 196 KPHGQLLKYDPSSNITTLVADG-------FYFANGVALSRDEDYVVVCESWK---FRCRKYWLKGERKGKLETFAEN--- 262 (372)
Q Consensus 196 ~~~g~v~~~d~~t~~~~~~~~~-------~~~~~gi~~~~dg~~l~v~~~~~---~~i~~~~~~g~~~~~~~~~~~~--- 262 (372)
..++.|..+|..+++....... ......++++++++.++.+. .+ +.|..|++...+ ....+...
T Consensus 204 ~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~-~d~~~g~i~i~d~~~~~--~~~~~~~~~~~ 280 (397)
T 1sq9_A 204 FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH-DSNSFGCITLYETEFGE--RIGSLSVPTHS 280 (397)
T ss_dssp CTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE-EETTEEEEEEEETTTCC--EEEEECBC---
T ss_pred eCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe-cCCCCceEEEEECCCCc--ccceeccCccc
Confidence 2568899999887776554444 34456789999999766654 34 578888876432 12222210
Q ss_pred ---------CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEE
Q 017371 263 ---------LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTII 332 (372)
Q Consensus 263 ---------~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~ 332 (372)
..+....+++.++|++.++... .+.|..++. +++.+
T Consensus 281 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------------------------------dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 281 SQASLGEFAHSSWVMSLSFNDSGETLCSAGW----------------------------------DGKLRFWDVKTKERI 326 (397)
T ss_dssp -----CCBSBSSCEEEEEECSSSSEEEEEET----------------------------------TSEEEEEETTTTEEE
T ss_pred ccccccccccCCcEEEEEECCCCCEEEEEeC----------------------------------CCeEEEEEcCCCcee
Confidence 2234567889999987776655 467777774 57777
Q ss_pred EEEE------CC-----CCC------eeccceeeEEE-CC----------EEEEEeCCCCeEEEEeC
Q 017371 333 RNLV------DP-----TGQ------LMSFVTSGLQV-DN----------HLYVISLTSNFIGKVQL 371 (372)
Q Consensus 333 ~~~~------~~-----~g~------~~~~~t~~~~~-~g----------~L~igs~~~~~i~~~~~ 371 (372)
..+. .. .|. ....++++... ++ ++++.......|.++++
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~ 393 (397)
T 1sq9_A 327 TTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 393 (397)
T ss_dssp EEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred EEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEc
Confidence 7776 22 000 02357777776 34 45555556677877765
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.62 E-value=1.9e-05 Score=73.22 Aligned_cols=192 Identities=14% Similarity=0.137 Sum_probs=109.1
Q ss_pred EEEcCCCc-EEEEec-CC--eEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCCCcEEEEc-CCC-cEEEeee
Q 017371 84 ASMDKNGV-IYTATR-DG--WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENFLSY 154 (372)
Q Consensus 84 i~~d~~G~-l~v~~~-~g--~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~gv~~~~-~~g-~~~l~~~ 154 (372)
.++.+||. |+++.. +| .|+.++ +++.+.+....+....+.++.|||+ |+++.....++.++ .+| ...+...
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 45778885 555554 55 588888 5665554433332221678999996 55555555799999 556 4433322
Q ss_pred cCCcccccccceEEccCCcEEEEeCC--CCCCC-ccc--ccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEec-
Q 017371 155 VNGSKLRFANDVVEASDGSLYFTVSS--SKYLP-HEY--CLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR- 228 (372)
Q Consensus 155 ~~~~~~~~~~~l~~d~dG~i~vtd~~--~~~~~-~~~--~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~- 228 (372)
+... ........+++|+..++... ..+.. ..+ ............|+.+|.++++.+.+.........++++|
T Consensus 121 -~~~~-~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 121 -PAEW-VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPY 198 (388)
T ss_dssp -CTTE-EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred -hhhc-ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCC
Confidence 2110 11112345788887664210 00000 000 0011223345789999999998887765544557889999
Q ss_pred CCCEEEEEeCC-----CCeEEEEEccCCCCcceeeeccCCCC-CCceeEEcCCCC-EEE
Q 017371 229 DEDYVVVCESW-----KFRCRKYWLKGERKGKLETFAENLPG-APDNINLAPDGT-FWI 280 (372)
Q Consensus 229 dg~~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~~~g-~p~~i~~d~~G~-lwv 280 (372)
||+.++++... ..+|+.++.++.... .+.....+ .....++.+||+ |+.
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTNMR---KVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCCCE---ESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCceE---EeeeCCCCcccccceECCCCCEEEE
Confidence 99888766543 348999988764322 22211111 123467899996 533
No 172
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.62 E-value=1.2e-05 Score=72.82 Aligned_cols=212 Identities=8% Similarity=0.085 Sum_probs=127.7
Q ss_pred EEEcCCCcEEEEe--cCCeEEEEe-CC-ceEEEEecCCCcccCeEEcCCCCEEEEeCC--------------CcEEEEcC
Q 017371 84 ASMDKNGVIYTAT--RDGWIKRLQ-DG-TWVNWKFIDSQTLVGLTSTKEGHLIICDNA--------------NGLHKVSE 145 (372)
Q Consensus 84 i~~d~~G~l~v~~--~~g~i~~~~-~g-~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~--------------~gv~~~~~ 145 (372)
++. .++.||+.+ .+++|++++ +| ..+.+... .+. .|..+ .+.||.+... ..|++++.
T Consensus 21 ~~~-~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~~~-~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCE-SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--TAM-YINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEE-ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--EEE-EEEEC-SSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEE-eCCEEEEEeCCCCceEEEEcCCCCCCEEccCC--cee-eEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 444 467999997 478899999 66 44444331 223 44443 3457766432 25888886
Q ss_pred CC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcce
Q 017371 146 DG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANG 223 (372)
Q Consensus 146 ~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~g 223 (372)
+| .+.+... .+ +.+++ .++.||+++.+ ......|++++.++.+.+.+.....
T Consensus 96 dg~~~~~l~~~-~~------~~~s~-~g~~Iy~~~~~--------------~~~~~~Iy~~~~dGs~~~~lt~~~~---- 149 (302)
T 3s25_A 96 NGHGSTVLDPD-PC------IYASL-IGNYIYYLHYD--------------TQTATSLYRIRIDGEEKKKIKNHYL---- 149 (302)
T ss_dssp TSCCCEEEECS-CE------EEEEE-ETTEEEEEEES--------------SSSCEEEEEEETTSCCCEEEESSCC----
T ss_pred CCCcceEeecC-Cc------cEEEE-eCCEEEEEeec--------------CCCCceEEEEECCCCCeEEEeCCCc----
Confidence 55 4444322 11 12333 34589998711 0145689999998766666655432
Q ss_pred EEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCC-CEEEEEecCchhHHHHhhcchhHHHH
Q 017371 224 VALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDG-TFWIAIIKLDARRMKILNSSKLIKHV 302 (372)
Q Consensus 224 i~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~r~~ 302 (372)
.+++++++.||+++.+...|++.+++|.. .+.+... +..+.+.|+| .||.+.+..
T Consensus 150 ~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~---~~~l~~~----~~~~~~~P~g~~iy~t~~~~----------------- 205 (302)
T 3s25_A 150 FTCNTSDRYFYYNNPKNGQLYRYDTASQS---EALFYDC----NCYKPVVLDDTNVYYMDVNR----------------- 205 (302)
T ss_dssp CCSEEETTEEEEECTTTCCEEEEETTTTE---EEEEECS----CEEEEEEEETTEEEEEEGGG-----------------
T ss_pred eEeeEECCEEEEEeCCCceEEEEECCCCC---EEEEeCC----CccceeeecCCEEEEEEcCC-----------------
Confidence 44688899999999878899999998742 2223221 2234455544 566666541
Q ss_pred HHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCCeeccceeeEEECCEEEEEe-CCCCeEEEEeCC
Q 017371 303 LAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVIS-LTSNFIGKVQLS 372 (372)
Q Consensus 303 ~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs-~~~~~i~~~~~~ 372 (372)
...|.+.+.+|.-...+.+ .. + ..+...+++||..+ ...+.|.++++|
T Consensus 206 ----------------~~~I~~~~ldG~~~~~Lt~--~~-~---~~~~~~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 206 ----------------DNAIVHVNINNPNPVVLTE--AN-I---EHYNVYGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp ----------------TTEEEEECSSSCCCEECSC--SC-E---EEEEEETTEEEEEECSSSCEEEEEETT
T ss_pred ----------------CcEEEEEECCCCCeEEEeC--CC-c---ceEEECCCEEEEEECCCCcEEEEEECC
Confidence 2368888888766555432 11 1 23555677888763 345777777765
No 173
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.60 E-value=1.7e-05 Score=78.09 Aligned_cols=239 Identities=12% Similarity=0.030 Sum_probs=136.3
Q ss_pred CCCccEEEcCCCcEEEEecCCeEEEEe--CC----c-eEEEEecCCC-cccCeEEcC--CCCEEEEeCCC-cEEEEc-CC
Q 017371 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DG----T-WVNWKFIDSQ-TLVGLTSTK--EGHLIICDNAN-GLHKVS-ED 146 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~~~g~i~~~~--~g----~-~~~~~~~~~~-p~~gl~~d~--dG~l~v~~~~~-gv~~~~-~~ 146 (372)
..+.+++++++|.+.+...++.|..|+ ++ + ...+....+. .. .+++.+ +|+++++.... .+..++ .+
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~-~~~~sp~~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVT-TVKFSPIKGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEE-EEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEE-EEEECcCCCCCEEEEecCCCEEEEEeCCC
Confidence 467789999999755544578898888 45 3 3333333334 55 899999 99866654443 466666 32
Q ss_pred C------cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccC
Q 017371 147 G------VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYF 220 (372)
Q Consensus 147 g------~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~ 220 (372)
+ .........+. ...+..+++.++|+..++-.. .....+.|+.+|.. .....+......
T Consensus 98 ~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~-------------~~~~~~~v~~~d~~-~~~~~~~~~~~~ 162 (615)
T 1pgu_A 98 DKESNSVEVNVKSEFQVL-AGPISDISWDFEGRRLCVVGE-------------GRDNFGVFISWDSG-NSLGEVSGHSQR 162 (615)
T ss_dssp EGGGTEEEEEEEEEEECC-SSCEEEEEECTTSSEEEEEEC-------------CSSCSEEEEETTTC-CEEEECCSCSSC
T ss_pred Ccccccccccccchhhcc-cccEEEEEEeCCCCEEEEecc-------------CCCCccEEEEEECC-CcceeeecCCcc
Confidence 2 11111111111 135678999999986665321 01123678888732 333333222334
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCC---CCceeEEcCC-CCEEEEEecCchhHHHHhhcc
Q 017371 221 ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPG---APDNINLAPD-GTFWIAIIKLDARRMKILNSS 296 (372)
Q Consensus 221 ~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g---~p~~i~~d~~-G~lwva~~~~~~~~~~~~~~~ 296 (372)
...++++++++.++++...++.|..+++...+ ....+. ...+ ....+++.++ |++.++...
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~------------ 227 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDR-THHKQGSFVRDVEFSPDSGEFVITVGS------------ 227 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEET------------
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeec-ccCCCCceEEEEEECCCCCCEEEEEeC------------
Confidence 56789999998566666667788888865421 112222 2222 3567889999 887666554
Q ss_pred hhHHHHHHhcCccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEEC-CEEEEEeCCCCeEEEEeC
Q 017371 297 KLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQVD-NHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 297 ~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~~-g~L~igs~~~~~i~~~~~ 371 (372)
.+.|..+| .+++.+..+..+.......+.++...+ ..|+.++ ....|.++++
T Consensus 228 ----------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~d~~i~~wd~ 281 (615)
T 1pgu_A 228 ----------------------DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVG-ADATIRVWDV 281 (615)
T ss_dssp ----------------------TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEE-TTSEEEEEET
T ss_pred ----------------------CCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEc-CCCcEEEEEC
Confidence 35667777 457777776220001112355555534 4455554 4466776664
No 174
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.60 E-value=7.6e-05 Score=67.71 Aligned_cols=184 Identities=14% Similarity=0.122 Sum_probs=108.5
Q ss_pred CCCCCCCccEEEcCCC--cEEEEecCCeEEEEe-CC---c----eEEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEE
Q 017371 75 EGSVNHPEDASMDKNG--VIYTATRDGWIKRLQ-DG---T----WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKV 143 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G--~l~v~~~~g~i~~~~-~g---~----~~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~ 143 (372)
.|.-....++++.+++ .|..+..|+.|..|+ .+ + ...+........ .+++.++|++.++... ..+..+
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~-~~~~s~dg~~l~s~s~D~~v~~w 92 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ-DCTLTADGAYALSASWDKTLRLW 92 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEE-EEEECCCCCEEEEEeCCCEEEEE
Confidence 3444456778888754 456667899998887 21 1 122222223344 8899999987666544 447777
Q ss_pred c-CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccC
Q 017371 144 S-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYF 220 (372)
Q Consensus 144 ~-~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~ 220 (372)
| .++ ...+... ...+..+++.+++.+.++-+ .++.|..+|........+......
T Consensus 93 d~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~s-----------------~D~~i~vwd~~~~~~~~~~~h~~~ 150 (319)
T 3frx_A 93 DVATGETYQRFVGH-----KSDVMSVDIDKKASMIISGS-----------------RDKTIKVWTIKGQCLATLLGHNDW 150 (319)
T ss_dssp ETTTTEEEEEEECC-----SSCEEEEEECTTSCEEEEEE-----------------TTSCEEEEETTSCEEEEECCCSSC
T ss_pred ECCCCCeeEEEccC-----CCcEEEEEEcCCCCEEEEEe-----------------CCCeEEEEECCCCeEEEEeccCCc
Confidence 7 666 3333211 12467889999998777633 466788888765544444332233
Q ss_pred cceEEEecCCC-----EEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 221 ANGVALSRDED-----YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 221 ~~gi~~~~dg~-----~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
...+++.|.+. .++++...+..|..+++...+ ....+. ...+....+++.++|++.++...
T Consensus 151 v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 151 VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFI-GHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp EEEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEEC-CCCSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeec-CCCCcEEEEEEcCCCCEEEEEeC
Confidence 34566766432 245555566778888875421 111222 22334567889999987776655
No 175
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.60 E-value=4.6e-05 Score=71.87 Aligned_cols=227 Identities=13% Similarity=0.089 Sum_probs=137.2
Q ss_pred CCccEEEcCCCcE-EEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cEEE
Q 017371 80 HPEDASMDKNGVI-YTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENF 151 (372)
Q Consensus 80 ~p~~i~~d~~G~l-~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~~l 151 (372)
...++++.++|.+ ..++.+|.|..|+ +++. ..+........ .+++.++|+.+++... .-+..++ .++ ...+
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~-~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS-SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 4567889888864 4556899999998 3332 22222223345 8999999986665444 4477777 666 3333
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cCcceEEEecC-
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVALSRD- 229 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~~~gi~~~~d- 229 (372)
... ...+..+.+.++|+++++-+ .++.|..+|..+++......+. ...+.++++|+
T Consensus 231 ~~h-----~~~v~~~~~~~~g~~l~s~s-----------------~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 288 (410)
T 1vyh_C 231 TGH-----REWVRMVRPNQDGTLIASCS-----------------NDQTVRVWVVATKECKAELREHRHVVECISWAPES 288 (410)
T ss_dssp ECC-----SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSC
T ss_pred eCC-----CccEEEEEECCCCCEEEEEc-----------------CCCeEEEEECCCCceeeEecCCCceEEEEEEcCcc
Confidence 211 12456788889998877632 4677888888777655443332 23356777775
Q ss_pred -------------------CCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHH
Q 017371 230 -------------------EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRM 290 (372)
Q Consensus 230 -------------------g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~ 290 (372)
+. ++++.+.++.|..+++.... ....+. ...+....++++++|.+.++...
T Consensus 289 ~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~--~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~------ 358 (410)
T 1vyh_C 289 SYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGM--CLMTLV-GHDNWVRGVLFHSGGKFILSCAD------ 358 (410)
T ss_dssp GGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSCEEEEET------
T ss_pred cccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCc--eEEEEE-CCCCcEEEEEEcCCCCEEEEEeC------
Confidence 44 45555566778888875431 122222 23334567899999987666655
Q ss_pred HHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEE
Q 017371 291 KILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGK 368 (372)
Q Consensus 291 ~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~ 368 (372)
.+.|..+|. +++.+..+....+ .++++... ++.+.+.......|.+
T Consensus 359 ----------------------------D~~i~vwd~~~~~~~~~~~~h~~----~v~~l~~~~~~~~l~sgs~D~~i~v 406 (410)
T 1vyh_C 359 ----------------------------DKTLRVWDYKNKRCMKTLNAHEH----FVTSLDFHKTAPYVVTGSVDQTVKV 406 (410)
T ss_dssp ----------------------------TTEEEEECCTTSCCCEEEECCSS----CEEEEEECSSSSCEEEEETTSEEEE
T ss_pred ----------------------------CCeEEEEECCCCceEEEEcCCCC----cEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 456777774 4666666654333 47777776 3433333334566776
Q ss_pred EeC
Q 017371 369 VQL 371 (372)
Q Consensus 369 ~~~ 371 (372)
+++
T Consensus 407 W~~ 409 (410)
T 1vyh_C 407 WEC 409 (410)
T ss_dssp EC-
T ss_pred EeC
Confidence 654
No 176
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.59 E-value=2e-05 Score=73.15 Aligned_cols=186 Identities=8% Similarity=-0.006 Sum_probs=116.3
Q ss_pred CCCCccEEEcCCC--cEEEEecCCeEEEEe--CCceEEEEe---cCCCcccCeEEcC-CCCEEEE-eCCCcEEEEc-CCC
Q 017371 78 VNHPEDASMDKNG--VIYTATRDGWIKRLQ--DGTWVNWKF---IDSQTLVGLTSTK-EGHLIIC-DNANGLHKVS-EDG 147 (372)
Q Consensus 78 ~~~p~~i~~d~~G--~l~v~~~~g~i~~~~--~g~~~~~~~---~~~~p~~gl~~d~-dG~l~v~-~~~~gv~~~~-~~g 147 (372)
-....++++.++| .|.++..+|.|..|+ +++...... ..+... ++++.+ +++++++ .....+..++ .+.
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 151 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAIT-GMKFNQFNTNQLFVSSIRGATTLRDFSGS 151 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEE-EEEEETTEEEEEEEEETTTEEEEEETTSC
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCcee-EEEeCCCCCCEEEEEeCCCEEEEEECCCC
Confidence 3456789999987 566667899999999 454443332 223445 899998 5565554 4334467777 434
Q ss_pred -cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEE
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVAL 226 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~ 226 (372)
...+... .+ ....+..+++.++|++.++- ..++.|..+|........+.........+++
T Consensus 152 ~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~-----------------~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~ 212 (383)
T 3ei3_B 152 VIQVFAKT-DS-WDYWYCCVDVSVSRQMLATG-----------------DSTGRLLLLGLDGHEIFKEKLHKAKVTHAEF 212 (383)
T ss_dssp EEEEEECC-CC-SSCCEEEEEEETTTTEEEEE-----------------ETTSEEEEEETTSCEEEEEECSSSCEEEEEE
T ss_pred ceEEEecc-CC-CCCCeEEEEECCCCCEEEEE-----------------CCCCCEEEEECCCCEEEEeccCCCcEEEEEE
Confidence 4443321 11 11346788999999876653 2568899999864444444444445678999
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCC-cceeeeccCCCCCCceeEEcC-CCCEEEEEec
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERK-GKLETFAENLPGAPDNINLAP-DGTFWIAIIK 284 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~-~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~ 284 (372)
+++++.++++...+..|..+++...+. ....... ...+....+++++ +|++.++...
T Consensus 213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 213 NPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp CSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 999984555555677888898875321 1111111 2334467789999 9987666554
No 177
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.59 E-value=7.8e-06 Score=75.76 Aligned_cols=227 Identities=13% Similarity=0.125 Sum_probs=131.6
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe--CCceE---EEEe-c-CCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--c
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWV---NWKF-I-DSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--V 148 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~---~~~~-~-~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~ 148 (372)
+..++++.+++.+.++..+|.|..|+ +++.. .+.. . .+... .+++.++|+++++... ..|..++ .++ .
T Consensus 96 ~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~-~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~ 174 (357)
T 4g56_B 96 GVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVK-TLSVFSDGTQAVSGGKDFSVKVWDLSQKAVL 174 (357)
T ss_dssp CEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 34578899999999998999998887 44311 1111 1 12345 8999999987666444 4477777 556 3
Q ss_pred EEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC---ccCcceE
Q 017371 149 ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---FYFANGV 224 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~---~~~~~gi 224 (372)
..+. +. ...++.+++.+++. ++++-. .++.|..+|..+++....... ......+
T Consensus 175 ~~~~----~h-~~~v~~v~~s~~~~~~~~s~~-----------------~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v 232 (357)
T 4g56_B 175 KSYN----AH-SSEVNCVAACPGKDTIFLSCG-----------------EDGRILLWDTRKPKPATRIDFCASDTIPTSV 232 (357)
T ss_dssp EEEC----CC-SSCEEEEEECTTCSSCEEEEE-----------------TTSCEEECCTTSSSCBCBCCCTTCCSCEEEE
T ss_pred EEEc----CC-CCCEEEEEEccCCCceeeeec-----------------cCCceEEEECCCCceeeeeeeccccccccch
Confidence 3221 11 13466788888763 555422 467788888876654332221 1234578
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHH
Q 017371 225 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLA 304 (372)
Q Consensus 225 ~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~ 304 (372)
+++|++..++++...+..|..+++...+. ...+. ...+....+++.++|.-++++...
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~~~~--~~~~~-~~~~~v~~l~~sp~~~~~lasgs~------------------- 290 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKNPDS--AQTSA-VHSQNITGLAYSYHSSPFLASISE------------------- 290 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSCGGG--CEEEC-CCSSCEEEEEECSSSSCCEEEEET-------------------
T ss_pred hhhhcccceEEEeecccceeEEECCCCcE--eEEEe-ccceeEEEEEEcCCCCCEEEEEeC-------------------
Confidence 89998766776666677788888765322 12222 222334678888888544443321
Q ss_pred hcCccccccccCCCceEEEEECCC-CcEEEEEECCCCCeeccceeeEEE--CCE-EEEEeCCCCeEEEEeC
Q 017371 305 AYPKLFSQFITLGGGAHLIHVAED-GTIIRNLVDPTGQLMSFVTSGLQV--DNH-LYVISLTSNFIGKVQL 371 (372)
Q Consensus 305 ~~p~~~~~~~~~~~~~~v~~~~~~-g~~~~~~~~~~g~~~~~~t~~~~~--~g~-L~igs~~~~~i~~~~~ 371 (372)
.+.|..+|.+ ++.+..+. . ...++++.+. ++. |.-++ ....|.+.++
T Consensus 291 --------------D~~i~iwd~~~~~~~~~~~-H----~~~V~~vafsP~d~~~l~s~s-~Dg~v~iW~~ 341 (357)
T 4g56_B 291 --------------DCTVAVLDADFSEVFRDLS-H----RDFVTGVAWSPLDHSKFTTVG-WDHKVLHHHL 341 (357)
T ss_dssp --------------TSCEEEECTTSCEEEEECC-C----SSCEEEEEECSSSTTEEEEEE-TTSCEEEEEC
T ss_pred --------------CCEEEEEECCCCcEeEECC-C----CCCEEEEEEeCCCCCEEEEEc-CCCeEEEEEC
Confidence 3456667754 55554432 1 2357777774 444 44444 4466666665
No 178
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.58 E-value=4.7e-05 Score=70.67 Aligned_cols=239 Identities=12% Similarity=0.027 Sum_probs=137.8
Q ss_pred CCCCCCCccEEEcCCCcEEEEecCCeEEEEe--CCc-------eEEEEecCCCcccCeEEcCC----C---CEEEEeC-C
Q 017371 75 EGSVNHPEDASMDKNGVIYTATRDGWIKRLQ--DGT-------WVNWKFIDSQTLVGLTSTKE----G---HLIICDN-A 137 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~-------~~~~~~~~~~p~~gl~~d~d----G---~l~v~~~-~ 137 (372)
.+.-....++++++ ..|+++..+|.|..|+ .++ ...+........ .+++.++ | +++++.. .
T Consensus 13 ~~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~g~~~~~l~s~~~d 90 (397)
T 1sq9_A 13 KAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH-HVDVLQAIERDAFELCLVATTSFS 90 (397)
T ss_dssp SCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEE-EEEEEEEEETTTEEEEEEEEEETT
T ss_pred hhhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEE-EEEEecccccCCccccEEEEEcCC
Confidence 44444567788887 6788888999999999 444 444443333445 8999988 8 7665543 3
Q ss_pred CcEEEEc-CCC-c--EEEeeecCCcc----cccccceEEc----cCCcE-EEEeCCCCCCCcccccccccccCCCeEEEE
Q 017371 138 NGLHKVS-EDG-V--ENFLSYVNGSK----LRFANDVVEA----SDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKY 204 (372)
Q Consensus 138 ~gv~~~~-~~g-~--~~l~~~~~~~~----~~~~~~l~~d----~dG~i-~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~ 204 (372)
..|..++ .++ . ..+.....+.. ...+..+++. ++|+. +++-. .++.|..+
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-----------------~dg~i~iw 153 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD-----------------VKGTTYIW 153 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE-----------------TTSCEEEE
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe-----------------CCCcEEEE
Confidence 4466676 333 2 11111111110 1456788999 88876 55422 35667777
Q ss_pred eCCC------Ce-EE-----EEe-------CCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc--CC
Q 017371 205 DPSS------NI-TT-----LVA-------DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE--NL 263 (372)
Q Consensus 205 d~~t------~~-~~-----~~~-------~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~--~~ 263 (372)
|..+ ++ .. .+. ........+++++++ ++++...++.|..|++...+ ....+.. ..
T Consensus 154 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~h 229 (397)
T 1sq9_A 154 KFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLR--PLYNFESQHSM 229 (397)
T ss_dssp EEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTE--EEEEEECCC--
T ss_pred eCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCc--eeEEEeccccc
Confidence 6554 21 11 221 123345689999999 44555567789989886432 1222221 02
Q ss_pred ---CCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCc---eEEEEEC-CCCcEEEEEE
Q 017371 264 ---PGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGG---AHLIHVA-EDGTIIRNLV 336 (372)
Q Consensus 264 ---~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~---~~v~~~~-~~g~~~~~~~ 336 (372)
.+....++++++|++.++... . +.|..+| .+++.+..+.
T Consensus 230 ~~~~~~i~~i~~~~~~~~l~~~~~----------------------------------d~~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 230 INNSNSIRSVKFSPQGSLLAIAHD----------------------------------SNSFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp -CCCCCEEEEEECSSTTEEEEEEE----------------------------------ETTEEEEEEEETTTCCEEEEEC
T ss_pred cccCCccceEEECCCCCEEEEEec----------------------------------CCCCceEEEEECCCCcccceec
Confidence 334677899999987776655 3 5777787 4577777776
Q ss_pred CCCC---------CeeccceeeEEE-CC-EEEEEeCCCCeEEEEeC
Q 017371 337 DPTG---------QLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQL 371 (372)
Q Consensus 337 ~~~g---------~~~~~~t~~~~~-~g-~L~igs~~~~~i~~~~~ 371 (372)
.+.. .....++++... ++ .|+.++ ....|.++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~ 320 (397)
T 1sq9_A 276 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDV 320 (397)
T ss_dssp BC--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEET
T ss_pred cCcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEc
Confidence 5110 012346777775 34 455554 5567777765
No 179
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.56 E-value=9e-07 Score=86.49 Aligned_cols=184 Identities=11% Similarity=0.105 Sum_probs=117.2
Q ss_pred ceEecCCCCCCCccEEEcCCC-cEEEEecCC--------------------------------------eEEEEe--C--
Q 017371 70 FIKVGEGSVNHPEDASMDKNG-VIYTATRDG--------------------------------------WIKRLQ--D-- 106 (372)
Q Consensus 70 ~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~g--------------------------------------~i~~~~--~-- 106 (372)
+..+..|. .|+.++++++| .+|+++.+. .|..+| .
T Consensus 188 ~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~ 265 (595)
T 1fwx_A 188 AWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEA 265 (595)
T ss_dssp EEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGG
T ss_pred EEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccC
Confidence 44555553 79999999988 677776331 245555 2
Q ss_pred Cce-EEEEecCCCcccCeEEcCCCC-EEEEeCC-CcEEEEc-CCCc-----------EEEeeecCCcccccccceEEccC
Q 017371 107 GTW-VNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLHKVS-EDGV-----------ENFLSYVNGSKLRFANDVVEASD 171 (372)
Q Consensus 107 g~~-~~~~~~~~~p~~gl~~d~dG~-l~v~~~~-~gv~~~~-~~g~-----------~~l~~~~~~~~~~~~~~l~~d~d 171 (372)
++. ......+..|. |+.++|||+ +||++.. ..+..++ .... ........| ..|.+++++++
T Consensus 266 ~~~~~~~Ipvg~~Ph-Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG---~gP~h~aF~~d 341 (595)
T 1fwx_A 266 SSLFTRYIPIANNPH-GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG---LGPLHTAFDGR 341 (595)
T ss_dssp CCSSEEEEEEESSCC-CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC---SCEEEEEECTT
T ss_pred CceeEEEEecCCCce-EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC---CCcceEEECCC
Confidence 222 23344456889 999999997 6777654 4588887 3210 122222222 46889999999
Q ss_pred CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC----------CeEEEEeCCccC------cceEEEecCCCEEEE
Q 017371 172 GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----------NITTLVADGFYF------ANGVALSRDEDYVVV 235 (372)
Q Consensus 172 G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t----------~~~~~~~~~~~~------~~gi~~~~dg~~l~v 235 (372)
|++|++.. -++.|.++|.++ .++....+.... +.|+.+++||++||+
T Consensus 342 G~aY~t~~-----------------ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 342 GNAYTSLF-----------------LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp SEEEEEET-----------------TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred CeEEEEEe-----------------cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 99999854 345677776543 222221222222 367788999999999
Q ss_pred EeCCC-CeE-----------EEEEccCCCCcceeeeccCCCCCCceeEEcCCCCE
Q 017371 236 CESWK-FRC-----------RKYWLKGERKGKLETFAENLPGAPDNINLAPDGTF 278 (372)
Q Consensus 236 ~~~~~-~~i-----------~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~l 278 (372)
++... +|+ ..|++.|.+......... .+.|+.+.+++...|
T Consensus 405 ~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~--~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 405 LSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPT--FAEPHDAIAVHPSIL 457 (595)
T ss_dssp EESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEE--SSCCCCEEEECTTTT
T ss_pred cCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcC--CCCCCceEEccHHHc
Confidence 99877 777 788987766554433322 346899998887755
No 180
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.56 E-value=1.6e-05 Score=79.17 Aligned_cols=185 Identities=10% Similarity=0.004 Sum_probs=107.7
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCCCc-EEEEc-CCC-cEEEee
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-VENFLS 153 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~~g-v~~~~-~~g-~~~l~~ 153 (372)
.|..++++|+|+..+...++.|..++ +++. ..+........ .+++.|+|++.++....| +..+| .++ .....
T Consensus 20 ~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~-~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~- 97 (611)
T 1nr0_A 20 TAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTT-VAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKT- 97 (611)
T ss_dssp CCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEESSSTTCCEEE-
T ss_pred ceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceE-EEEECCCCcEEEEEeCCCCEEEeECCCCcceeeE-
Confidence 67889999999655544466788888 4443 33332233445 899999998776654444 66677 444 21111
Q ss_pred ecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEE
Q 017371 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYV 233 (372)
Q Consensus 154 ~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l 233 (372)
...+. ...+..++++++|+..++-... ....+.|+.+|.. .....+...-...+.++|+|++...
T Consensus 98 ~~~~~-~~~v~~v~fs~dg~~l~~~~~~-------------~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~~ 162 (611)
T 1nr0_A 98 TIPVF-SGPVKDISWDSESKRIAAVGEG-------------RERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPFR 162 (611)
T ss_dssp EEECS-SSCEEEEEECTTSCEEEEEECC-------------SSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSCE
T ss_pred eeccc-CCceEEEEECCCCCEEEEEECC-------------CCceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCeE
Confidence 11111 1356789999999876653210 0123567777642 1111111122234678999998866
Q ss_pred EEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 234 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 234 ~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++.+.+..|..++.... .....+. ...+....+++.++|++.++...
T Consensus 163 l~s~s~D~~v~lwd~~~~--~~~~~l~-~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGPPF--KFKSTFG-EHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp EEEEETTSCEEEEETTTB--EEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEeCCCeEEEEECCCC--eEeeeec-cccCceEEEEECCCCCEEEEEEC
Confidence 666666777777775432 1112222 23334667899999998777655
No 181
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.56 E-value=1e-05 Score=75.94 Aligned_cols=149 Identities=10% Similarity=-0.009 Sum_probs=92.0
Q ss_pred CCccEEEcCCC-cEEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC-cEEEee
Q 017371 80 HPEDASMDKNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VENFLS 153 (372)
Q Consensus 80 ~p~~i~~d~~G-~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g-~~~l~~ 153 (372)
...+++++++| .|+++..+|.|..|+ .++....... .......++.++|+++++... ..+..++ ..+ .....
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~- 135 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKR-ADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID- 135 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCS-CCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET-
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEec-CCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec-
Confidence 35578999877 677788899999998 2222111111 122213356788876665444 4477777 555 32221
Q ss_pred ecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-ccCcceEEEecCCCE
Q 017371 154 YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFANGVALSRDEDY 232 (372)
Q Consensus 154 ~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~-~~~~~gi~~~~dg~~ 232 (372)
.+ ....+..+++.++|++.++- ..++.|..+|..+++......+ ......++++|+++.
T Consensus 136 --~~-h~~~v~~~~~~~~~~~l~s~-----------------s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 195 (420)
T 3vl1_A 136 --QA-HVSEITKLKFFPSGEALISS-----------------SQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN 195 (420)
T ss_dssp --TS-SSSCEEEEEECTTSSEEEEE-----------------ETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTE
T ss_pred --cc-ccCccEEEEECCCCCEEEEE-----------------eCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE
Confidence 11 11356789999999866652 2567899999876654433332 334467899999996
Q ss_pred EEEEeCCCCeEEEEEccCC
Q 017371 233 VVVCESWKFRCRKYWLKGE 251 (372)
Q Consensus 233 l~v~~~~~~~i~~~~~~g~ 251 (372)
++.+. .++.|..+++...
T Consensus 196 l~s~~-~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 196 VLSAS-LDGTIRLWECGTG 213 (420)
T ss_dssp EEEEE-TTSCEEEEETTTT
T ss_pred EEEEc-CCCcEEEeECCCC
Confidence 66554 4567888887643
No 182
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.56 E-value=0.00013 Score=71.86 Aligned_cols=229 Identities=11% Similarity=0.088 Sum_probs=138.9
Q ss_pred CccEEEcC--CCc-EEEEecCCeEEEEe--CC------ceE---EEEecCCCcccCeEEcCCCCEEEEeCCC----c-EE
Q 017371 81 PEDASMDK--NGV-IYTATRDGWIKRLQ--DG------TWV---NWKFIDSQTLVGLTSTKEGHLIICDNAN----G-LH 141 (372)
Q Consensus 81 p~~i~~d~--~G~-l~v~~~~g~i~~~~--~g------~~~---~~~~~~~~p~~gl~~d~dG~l~v~~~~~----g-v~ 141 (372)
..++++.+ +|. |++++.+|.|..|+ ++ +.+ .+....+... .+++.++|+.+++.... + +.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS-DISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEECCSSCSEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEE-EEEEeCCCCEEEEeccCCCCccEEE
Confidence 67899999 885 55566899998888 33 212 2222233445 89999999866654332 2 44
Q ss_pred EEcCCC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCcc
Q 017371 142 KVSEDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY 219 (372)
Q Consensus 142 ~~~~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~ 219 (372)
.++... ...+ .+. ...+..+++.++|. +.++- ..++.|..+|..+++.........
T Consensus 146 ~~d~~~~~~~~----~~~-~~~v~~~~~~~~~~~~l~~~-----------------~~d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 146 SWDSGNSLGEV----SGH-SQRINACHLKQSRPMRSMTV-----------------GDDGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp ETTTCCEEEEC----CSC-SSCEEEEEECSSSSCEEEEE-----------------ETTTEEEEEETTTBEEEEEECSSS
T ss_pred EEECCCcceee----ecC-CccEEEEEECCCCCcEEEEE-----------------eCCCcEEEEeCCCcceeeeecccC
Confidence 444222 2222 111 13567899999996 55542 256789999988777655544433
Q ss_pred ----CcceEEEecC-CCEEEEEeCCCCeEEEEEccCCCCcceeeecc---CCCCCCceeEEcCCCCEEEEEecCchhHHH
Q 017371 220 ----FANGVALSRD-EDYVVVCESWKFRCRKYWLKGERKGKLETFAE---NLPGAPDNINLAPDGTFWIAIIKLDARRMK 291 (372)
Q Consensus 220 ----~~~gi~~~~d-g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~---~~~g~p~~i~~d~~G~lwva~~~~~~~~~~ 291 (372)
....++++|+ ++.++.+. .++.|..+++...+ ....+.. ...+....+++. +|++.++...
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~------- 272 (615)
T 1pgu_A 204 KQGSFVRDVEFSPDSGEFVITVG-SDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA------- 272 (615)
T ss_dssp CTTCCEEEEEECSTTCCEEEEEE-TTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEET-------
T ss_pred CCCceEEEEEECCCCCCEEEEEe-CCCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCCEEEEEcC-------
Confidence 3467899999 88666555 45678888876432 1222211 223345678888 8887776665
Q ss_pred HhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEE-ECCEEEEEeCCCCeEEEE
Q 017371 292 ILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQ-VDNHLYVISLTSNFIGKV 369 (372)
Q Consensus 292 ~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~-~~g~L~igs~~~~~i~~~ 369 (372)
.+.+..++. +++.+..+..........+..+.. .++.+..++. ...|..+
T Consensus 273 ---------------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~i~~~ 324 (615)
T 1pgu_A 273 ---------------------------DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL-DGTLNFY 324 (615)
T ss_dssp ---------------------------TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET-TSCEEEE
T ss_pred ---------------------------CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC-CCCEEEE
Confidence 456777774 477777777653222233444444 4566766665 4566666
Q ss_pred eC
Q 017371 370 QL 371 (372)
Q Consensus 370 ~~ 371 (372)
++
T Consensus 325 d~ 326 (615)
T 1pgu_A 325 EL 326 (615)
T ss_dssp ET
T ss_pred EC
Confidence 54
No 183
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.54 E-value=3.7e-05 Score=77.60 Aligned_cols=181 Identities=12% Similarity=0.133 Sum_probs=107.9
Q ss_pred CccEEEcCCCc-EEEEe---------------------------------cCCeEEEEe--CCceEEEEec---CCCccc
Q 017371 81 PEDASMDKNGV-IYTAT---------------------------------RDGWIKRLQ--DGTWVNWKFI---DSQTLV 121 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~---------------------------------~~g~i~~~~--~g~~~~~~~~---~~~p~~ 121 (372)
+.++++.+||+ |+++. .+..|+.++ +++...+... ...+.
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~- 261 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT- 261 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE-
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe-
Confidence 47899999995 55554 235688888 4554433221 12244
Q ss_pred CeEEcCCCC-EEEEeCCC-----cEEEEc-CCC--cEEEeeecCCcccccccceEEcc--CCcEEEEeCCCCCCCccccc
Q 017371 122 GLTSTKEGH-LIICDNAN-----GLHKVS-EDG--VENFLSYVNGSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCL 190 (372)
Q Consensus 122 gl~~d~dG~-l~v~~~~~-----gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~--dG~i~vtd~~~~~~~~~~~~ 190 (372)
.+++.+||+ |+++.... .++.++ .+| ...+..............+++.+ ||+++++..
T Consensus 262 ~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~----------- 330 (706)
T 2z3z_A 262 NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR----------- 330 (706)
T ss_dssp EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC-----------
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc-----------
Confidence 789999997 55544332 577888 555 33332221111111235788999 997555422
Q ss_pred ccccccCCCeEEEEeCCCCeEEEEeCCccCcce-EEEecCCCEEEEEeCCCC----eEEEEEccCCCCcceeeeccCCCC
Q 017371 191 DILEGKPHGQLLKYDPSSNITTLVADGFYFANG-VALSRDEDYVVVCESWKF----RCRKYWLKGERKGKLETFAENLPG 265 (372)
Q Consensus 191 ~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~g-i~~~~dg~~l~v~~~~~~----~i~~~~~~g~~~~~~~~~~~~~~g 265 (372)
.....+||.+|.+++..+.+..+...... +++++|++.+|++..... .|++++.++.+ ...+. . .+
T Consensus 331 ----~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~l~-~-~~ 401 (706)
T 2z3z_A 331 ----RDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---TKDLT-P-ES 401 (706)
T ss_dssp ----TTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC---CEESC-C-SS
T ss_pred ----cCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC---ceecc-C-CC
Confidence 11346799999765655555433222233 689999999998877654 78888876543 22222 1 12
Q ss_pred CCceeEEcCCCCEEEEE
Q 017371 266 APDNINLAPDGTFWIAI 282 (372)
Q Consensus 266 ~p~~i~~d~~G~lwva~ 282 (372)
....+++++||+.++..
T Consensus 402 ~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 402 GMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp SEEEEEECTTSSEEEEE
T ss_pred ceEEEEECCCCCEEEEE
Confidence 24567888999766554
No 184
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.53 E-value=6.2e-06 Score=81.53 Aligned_cols=178 Identities=13% Similarity=0.037 Sum_probs=103.5
Q ss_pred CccEEEcCCCcEEEEec---CC--eEEEEe---CCceEEEEecCCCcccCeEEcCCC--CEEEEeCCCcEEEEc-CCC-c
Q 017371 81 PEDASMDKNGVIYTATR---DG--WIKRLQ---DGTWVNWKFIDSQTLVGLTSTKEG--HLIICDNANGLHKVS-EDG-V 148 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~---~g--~i~~~~---~g~~~~~~~~~~~p~~gl~~d~dG--~l~v~~~~~gv~~~~-~~g-~ 148 (372)
..++++.++..+|+++. +. +|+.++ +|....+.. ..... ..++.+|| .+|++....++..++ .+| .
T Consensus 67 ~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~-~~~~~-~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~ 144 (582)
T 3o4h_A 67 VLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA-VKPMR-ILSGVDTGEAVVFTGATEDRVALYALDGGGL 144 (582)
T ss_dssp ECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCEECTT-SCSBE-EEEEEECSSCEEEEEECSSCEEEEEEETTEE
T ss_pred cccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccccccC-CCCce-eeeeCCCCCeEEEEecCCCCceEEEccCCcE
Confidence 34556666644455543 22 455565 233332211 12222 34555555 456655555666777 566 5
Q ss_pred EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEec
Q 017371 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR 228 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~ 228 (372)
+.+... + . ..++++|||+.+++.+. .......|+.+|.++++.+.+.......+.++|+|
T Consensus 145 ~~l~~~-~-----~-~~~~~spDG~~la~~~~-------------~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~Sp 204 (582)
T 3o4h_A 145 RELARL-P-----G-FGFVSDIRGDLIAGLGF-------------FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISP 204 (582)
T ss_dssp EEEEEE-S-----S-CEEEEEEETTEEEEEEE-------------EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECT
T ss_pred EEeecC-C-----C-ceEEECCCCCEEEEEEE-------------cCCCCeEEEEEcCCCCCceEeecCCCccccceECC
Confidence 444322 1 1 57889999986664221 01122569999998888877655444457899999
Q ss_pred CCCEEEEEeCCC-CeEEEEEccCCCCcceeeeccCCCCCCceeE--------EcCCCCEEEEEec
Q 017371 229 DEDYVVVCESWK-FRCRKYWLKGERKGKLETFAENLPGAPDNIN--------LAPDGTFWIAIIK 284 (372)
Q Consensus 229 dg~~l~v~~~~~-~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~--------~d~~G~lwva~~~ 284 (372)
||+.++.++..+ ..|+.+++++.+ .. ........+.+++ +++||.++++...
T Consensus 205 DG~~l~~~~~~~~~~i~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 205 GMKVTAGLETAREARLVTVDPRDGS---VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp TSCEEEEEECSSCEEEEEECTTTCC---EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEccCCCeeEEEEEcCCCCc---EE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 999988655433 379999887643 22 2222222234456 9999988887654
No 185
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.53 E-value=4.2e-05 Score=72.56 Aligned_cols=185 Identities=13% Similarity=0.099 Sum_probs=113.0
Q ss_pred CCCccEEEcCC-C-cEEEEecCCeEEEEe--C----------Cc-eEEEEecCCCcccCeEEcCCCC-EEEEeCC-CcEE
Q 017371 79 NHPEDASMDKN-G-VIYTATRDGWIKRLQ--D----------GT-WVNWKFIDSQTLVGLTSTKEGH-LIICDNA-NGLH 141 (372)
Q Consensus 79 ~~p~~i~~d~~-G-~l~v~~~~g~i~~~~--~----------g~-~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~-~gv~ 141 (372)
..+.++++.++ + .+++++.+|.|..|+ . .. ...+........ ++++.+++. ++++... ..|.
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGY-GLSWNPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCC-CEEECTTSTTEEEEECTTSCEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeE-EEEeCCCCCCeEEEEeCCCeEE
Confidence 46788999986 4 445556889999998 3 12 223333334456 999999887 6665444 4477
Q ss_pred EEc-CCC---cEEEe--eecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC----e
Q 017371 142 KVS-EDG---VENFL--SYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN----I 210 (372)
Q Consensus 142 ~~~-~~g---~~~l~--~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~----~ 210 (372)
.++ ..+ ...+. ....+ ....+.++++.+ ++.++++.. .++.|..+|..++ .
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~-----------------~dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVA-----------------DDQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp EEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEETTCSCSSSC
T ss_pred EEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEe-----------------CCCeEEEEECCCCCCCcc
Confidence 777 442 11111 11111 113567899988 567776633 5688999998755 2
Q ss_pred EEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEEec
Q 017371 211 TTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAIIK 284 (372)
Q Consensus 211 ~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~~~ 284 (372)
...+...-...+.++++|++++++++...++.|..|++.... .....+. ...+....+++.++|. ++++...
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~ 342 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFE-SHKDEIFQVQWSPHNETILASSGT 342 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEE-CCSSCEEEEEECSSCTTEEEEEET
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEee-cCCCCEEEEEECCCCCCEEEEEeC
Confidence 222323334467899999998777777777889999986532 1122222 2233466788999984 5555543
No 186
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.49 E-value=2.8e-05 Score=70.86 Aligned_cols=184 Identities=9% Similarity=0.034 Sum_probs=106.4
Q ss_pred CCccEEEcCC----CcEEEEecCCeEEEEe--CCc--eEEEEecCCCcccCe------EEcCCCCEEEEeCC-CcEEEEc
Q 017371 80 HPEDASMDKN----GVIYTATRDGWIKRLQ--DGT--WVNWKFIDSQTLVGL------TSTKEGHLIICDNA-NGLHKVS 144 (372)
Q Consensus 80 ~p~~i~~d~~----G~l~v~~~~g~i~~~~--~g~--~~~~~~~~~~p~~gl------~~d~dG~l~v~~~~-~gv~~~~ 144 (372)
...++++.++ ..|+++..+|.|..|+ .++ ...+....+... .+ ++.++|+++++... ..+..++
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN-AIDGIGGLGIGEGAPEIVTGSRDGTVKVWD 145 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEE-EEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceE-EEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence 4567888876 4677777899999999 443 334332223333 55 44678876665444 4477777
Q ss_pred -CCC---cEEEeeecCCcccccccceE----EccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC
Q 017371 145 -EDG---VENFLSYVNGSKLRFANDVV----EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 216 (372)
Q Consensus 145 -~~g---~~~l~~~~~~~~~~~~~~l~----~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~ 216 (372)
.++ ...+.. ..+.....+..++ +.+++++.++-. .++.|..+|..+++......
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~~~ 207 (357)
T 3i2n_A 146 PRQKDDPVANMEP-VQGENKRDCWTVAFGNAYNQEERVVCAGY-----------------DNGDIKLFDLRNMALRWETN 207 (357)
T ss_dssp TTSCSSCSEEECC-CTTSCCCCEEEEEEECCCC-CCCEEEEEE-----------------TTSEEEEEETTTTEEEEEEE
T ss_pred CCCCCCcceeccc-cCCCCCCceEEEEEEeccCCCCCEEEEEc-----------------cCCeEEEEECccCceeeecC
Confidence 443 333321 1221112344555 567887666532 46789999998887655443
Q ss_pred CccCcceEEEec---CCCEEEEEeCCCCeEEEEEccCCCCcc-eeee-ccCCCCCCceeEEcCCCC-EEEEEe
Q 017371 217 GFYFANGVALSR---DEDYVVVCESWKFRCRKYWLKGERKGK-LETF-AENLPGAPDNINLAPDGT-FWIAII 283 (372)
Q Consensus 217 ~~~~~~gi~~~~---dg~~l~v~~~~~~~i~~~~~~g~~~~~-~~~~-~~~~~g~p~~i~~d~~G~-lwva~~ 283 (372)
.......++++| +++.++++. .++.|..|++...+... .... .....+....+++.++|. +.++..
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 279 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATS-LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG 279 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEE-STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEEC-CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe
Confidence 344556889999 888666664 56678888876432211 1100 012233456788899887 444433
No 187
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.48 E-value=1.3e-05 Score=74.54 Aligned_cols=153 Identities=8% Similarity=-0.043 Sum_probs=90.9
Q ss_pred cEEEcCCC-cEEEEecCCeEEEEe--CCceEEEEecCCC-cc-cCeEEcCCCCEEEEe----------------------
Q 017371 83 DASMDKNG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQ-TL-VGLTSTKEGHLIICD---------------------- 135 (372)
Q Consensus 83 ~i~~d~~G-~l~v~~~~g~i~~~~--~g~~~~~~~~~~~-p~-~gl~~d~dG~l~v~~---------------------- 135 (372)
++++.++| .|+++..++.|+.++ +++.+.+...... .. ....++++|+++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 56888988 577777778899999 5555443332221 11 023347888876632
Q ss_pred -CCCcEEEEc-CCC-cEEEeeecCCcccccccceEEcc-CCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe
Q 017371 136 -NANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEAS-DGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI 210 (372)
Q Consensus 136 -~~~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~d~-dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~ 210 (372)
....|+.++ .+| .+.+... . ....++++.| ||+ |.++.... ......+|+.+|.++++
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~-~----~~~~~~~~sp~dg~~l~~~~~~~------------~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQE-N----QWLGHPIYRPYDDSTVAFCHEGP------------HDLVDARMWLINEDGTN 227 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEE-S----SCEEEEEEETTEEEEEEEEECSC------------TTTSSCSEEEEETTSCC
T ss_pred CCcceEEEEECCCCceEEeecC-C----ccccccEECCCCCCEEEEEEecC------------CCCCcceEEEEeCCCCc
Confidence 113588888 666 5555332 1 2346788999 885 44432210 00124579999988776
Q ss_pred EEEEeCCcc--CcceEEEecCCCEEEE-EeCCCC---eEEEEEccCCC
Q 017371 211 TTLVADGFY--FANGVALSRDEDYVVV-CESWKF---RCRKYWLKGER 252 (372)
Q Consensus 211 ~~~~~~~~~--~~~gi~~~~dg~~l~v-~~~~~~---~i~~~~~~g~~ 252 (372)
.+.+..... .....+|+|||+.|++ +...+. .|+.+++++.+
T Consensus 228 ~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 228 MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 666544321 2335789999997754 443222 39999987643
No 188
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.48 E-value=8.2e-05 Score=69.59 Aligned_cols=182 Identities=10% Similarity=-0.037 Sum_probs=112.4
Q ss_pred CCCccEEEcC-CCc-EEEEecCCeEEEEe--CCc--------eEEEEecCCCcccCeEEcCCC-CEEEE-eCCCcEEEEc
Q 017371 79 NHPEDASMDK-NGV-IYTATRDGWIKRLQ--DGT--------WVNWKFIDSQTLVGLTSTKEG-HLIIC-DNANGLHKVS 144 (372)
Q Consensus 79 ~~p~~i~~d~-~G~-l~v~~~~g~i~~~~--~g~--------~~~~~~~~~~p~~gl~~d~dG-~l~v~-~~~~gv~~~~ 144 (372)
....++++.+ ++. |+++..+|.|..|+ ++. ...+........ .+++.++| +++++ ..+..+..++
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG-IVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE-EEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE-EEEECcCCCCEEEEEcCCCEEEEEE
Confidence 3456789988 775 55566899999998 432 233333334455 89999998 56555 4344577888
Q ss_pred -CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-CCccC
Q 017371 145 -EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-DGFYF 220 (372)
Q Consensus 145 -~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-~~~~~ 220 (372)
.++ ...+.. .+ ....+..+++.++|+.+++-. .++.|..+|..+++..... .....
T Consensus 161 ~~~~~~~~~~~~--~~-~~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 161 VGTGAAVLTLGP--DV-HPDTIYSVDWSRDGALICTSC-----------------RDKRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp TTTTEEEEEECT--TT-CCSCEEEEEECTTSSCEEEEE-----------------TTSEEEEEETTTTEEEEEEECSSCS
T ss_pred CCCCCccEEEec--CC-CCCceEEEEECCCCCEEEEEe-----------------cCCcEEEEeCCCCceeeeeccCCCC
Confidence 666 332310 11 113567899999997666522 5678999999887765544 33322
Q ss_pred --cceEEEecCCCEEEEEe--CCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEE
Q 017371 221 --ANGVALSRDEDYVVVCE--SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 282 (372)
Q Consensus 221 --~~gi~~~~dg~~l~v~~--~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~ 282 (372)
...++++++++.++.+. ..+..|..+++...+... .............++++++|++.+..
T Consensus 221 ~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPL-SLQELDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCS-EEEECCCCSSCEEEEEETTTTEEEEE
T ss_pred CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCc-eEEeccCCCceeEEEEcCCCCEEEEE
Confidence 57789999987555442 456678888886543211 11111122336678899999866543
No 189
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.47 E-value=0.00016 Score=67.64 Aligned_cols=175 Identities=9% Similarity=0.049 Sum_probs=110.4
Q ss_pred CCccEEEcCCC-cEEEEecCCeEEEEe--CCc-eEEEEecCCCcccCeEEcCCCCEE-EEeCCCcEEEEc-CCC---cEE
Q 017371 80 HPEDASMDKNG-VIYTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLI-ICDNANGLHKVS-EDG---VEN 150 (372)
Q Consensus 80 ~p~~i~~d~~G-~l~v~~~~g~i~~~~--~g~-~~~~~~~~~~p~~gl~~d~dG~l~-v~~~~~gv~~~~-~~g---~~~ 150 (372)
...++++.++| .|+++..+|.|..|+ +++ ...+....+... .+.++ ++++ .+.....+..++ ..+ ...
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~ 212 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVG-CLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGT 212 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEEE--TTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceE-EEEEC--CCEEEEEcCCCCEEEEecccCcceeeE
Confidence 45678888888 455666899999998 444 333333333444 77774 4444 444444577777 423 222
Q ss_pred EeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC-CccCcceEEEecC
Q 017371 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-GFYFANGVALSRD 229 (372)
Q Consensus 151 l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~-~~~~~~gi~~~~d 229 (372)
+.. . ...+..+++.++|+++++-. .++.|..+|..+++...... .......++++|+
T Consensus 213 ~~~-~----~~~v~~~~~~~~~~~l~s~~-----------------~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~ 270 (401)
T 4aez_A 213 LQG-H----SSEVCGLAWRSDGLQLASGG-----------------NDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPW 270 (401)
T ss_dssp EEC-C----SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTCSSEEEEECCCSSCCCEEEECTT
T ss_pred EcC-C----CCCeeEEEEcCCCCEEEEEe-----------------CCCeEEEccCCCCCccEEecCCcceEEEEEECCC
Confidence 211 1 13567889999998777522 46789999988766554443 3344578999999
Q ss_pred CCEEEEEeC--CCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 017371 230 EDYVVVCES--WKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 230 g~~l~v~~~--~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~ 283 (372)
+..++++.. .+..|..+++...+. ...+. ..+....+++.++|.+.++..
T Consensus 271 ~~~ll~~~~gs~d~~i~i~d~~~~~~--~~~~~--~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 271 QSNLLATGGGTMDKQIHFWNAATGAR--VNTVD--AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp STTEEEEECCTTTCEEEEEETTTCCE--EEEEE--CSSCEEEEEECSSSSEEEEEE
T ss_pred CCCEEEEecCCCCCEEEEEECCCCCE--EEEEe--CCCcEEEEEECCCCCeEEEEe
Confidence 887888754 567888888764321 12221 223467788999998777754
No 190
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.47 E-value=9.3e-06 Score=82.17 Aligned_cols=136 Identities=9% Similarity=-0.043 Sum_probs=86.1
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEecCC----CcccCeEEcCCCCEEEEe-CC---------CcEEEE
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDS----QTLVGLTSTKEGHLIICD-NA---------NGLHKV 143 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~----~p~~gl~~d~dG~l~v~~-~~---------~gv~~~ 143 (372)
.+.++++.++|.++.++.+|.|+.++ +|+......... ... .+++.|||+..+.. .. ..++.+
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~-~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAI-RYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCS-EEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccc-eEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 46778888899865556788899998 566555443322 255 89999999844432 21 346677
Q ss_pred c-CCC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCcc-
Q 017371 144 S-EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY- 219 (372)
Q Consensus 144 ~-~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~- 219 (372)
+ .+| .+.+... .+ ....+..+++.|||+ |.++ ..+.|+.+|.++++...+.....
T Consensus 97 d~~~~~~~~l~~~-~~-~~~~~~~~~~SPdG~~la~~-------------------~~~~i~~~~~~~g~~~~~~~~~~~ 155 (723)
T 1xfd_A 97 KIPHGDPQSLDPP-EV-SNAKLQYAGWGPKGQQLIFI-------------------FENNIYYCAHVGKQAIRVVSTGKE 155 (723)
T ss_dssp ESSSCCCEECCCT-TC-CSCCCSBCCBCSSTTCEEEE-------------------ETTEEEEESSSSSCCEEEECCCBT
T ss_pred ECCCCceEeccCC-cc-ccccccccEECCCCCEEEEE-------------------ECCeEEEEECCCCceEEEecCCCC
Confidence 7 555 5333221 11 111256788999995 4443 12579999988777665543311
Q ss_pred ------------------CcceEEEecCCCEEEEEe
Q 017371 220 ------------------FANGVALSRDEDYVVVCE 237 (372)
Q Consensus 220 ------------------~~~gi~~~~dg~~l~v~~ 237 (372)
...+++|+|||+.|+++.
T Consensus 156 ~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 156 GVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp TTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred CceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 125799999999888765
No 191
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.46 E-value=3.4e-05 Score=69.97 Aligned_cols=180 Identities=10% Similarity=0.001 Sum_probs=105.2
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCc----eEEEEecCCCcccCeEEcCCCC-EEE-EeCCCcEEEEcC-CC-
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGT----WVNWKFIDSQTLVGLTSTKEGH-LII-CDNANGLHKVSE-DG- 147 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~----~~~~~~~~~~p~~gl~~d~dG~-l~v-~~~~~gv~~~~~-~g- 147 (372)
....++++.++|. |+++..+|.|..|+ .++ ............ .+++.++|+ +++ +.....+..++. +.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL-CCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEE-EEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceE-EEEECCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 3566788888875 66667899999888 444 333333334455 899999998 444 444445777774 44
Q ss_pred -cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC---------CeEEEEeCC
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS---------NITTLVADG 217 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t---------~~~~~~~~~ 217 (372)
...+... .....+..+++.+ ++.+++-. .++.|..+|..+ ++.......
T Consensus 91 ~~~~~~~~---~~~~~v~~l~~~~-~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 91 SFQALTNN---EANLGICRICKYG-DDKLIAAS-----------------WDGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp SEEECBSC---CCCSCEEEEEEET-TTEEEEEE-----------------TTSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred ceEecccc---CCCCceEEEEeCC-CCEEEEEc-----------------CCCeEEEEcccccccccccccCCeeeEEee
Confidence 3222110 0113466788888 76666522 467788887653 221111112
Q ss_pred ccCcceEEEecCCCEEEEEeCCCCeEEEEEccC-CCCcceeeeccCCCCCCceeEEcC-CCCEEEEEec
Q 017371 218 FYFANGVALSRDEDYVVVCESWKFRCRKYWLKG-ERKGKLETFAENLPGAPDNINLAP-DGTFWIAIIK 284 (372)
Q Consensus 218 ~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~g~p~~i~~d~-~G~lwva~~~ 284 (372)
-.....+++++++ ++++ +.+..|..|++.. ...... ............+++.+ +|++.++...
T Consensus 150 ~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~i~~i~~~~~~~~~l~~~~~ 214 (342)
T 1yfq_A 150 KNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDDNGT-IEESGLKYQIRDVALLPKEQEGYACSSI 214 (342)
T ss_dssp CCCEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTCCCE-EEECSCSSCEEEEEECSGGGCEEEEEET
T ss_pred CCceEEEEecCCc--EEEE-eCCCeEEEEECCccccccce-eeecCCCCceeEEEECCCCCCEEEEEec
Confidence 2234567888776 5544 4566899998865 322111 11112333467788999 8887666554
No 192
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.45 E-value=2.1e-05 Score=74.66 Aligned_cols=185 Identities=10% Similarity=0.009 Sum_probs=110.5
Q ss_pred CCccEEEcC-CC-cEEEEecCCeEEEEe--CCceEEEEec---CCCcccCeEEcC-CCCEEEEeCCC-cEEEEc-CCC-c
Q 017371 80 HPEDASMDK-NG-VIYTATRDGWIKRLQ--DGTWVNWKFI---DSQTLVGLTSTK-EGHLIICDNAN-GLHKVS-EDG-V 148 (372)
Q Consensus 80 ~p~~i~~d~-~G-~l~v~~~~g~i~~~~--~g~~~~~~~~---~~~p~~gl~~d~-dG~l~v~~~~~-gv~~~~-~~g-~ 148 (372)
...+|++.| ++ .|.+|+.+|.|..|+ .++....... .+... +|++.| +++++++.... -|..+| ..+ .
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~-~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSIT-GLKFNPLNTNQFYASSMEGTTRLQDFKGNIL 199 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCC-EEEECSSCTTEEEEECSSSCEEEEETTSCEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEE-EEEEeCCCCCEEEEEeCCCEEEEeeccCCce
Confidence 456799986 44 466788999999998 4443332221 23345 899996 67766665443 477777 545 4
Q ss_pred EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEec
Q 017371 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR 228 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~ 228 (372)
..+..... .......++++++|++.++- ..+|.|..+|..++....+...-..-+.++++|
T Consensus 200 ~~~~~~~~--~~~~~~~~~~~~~~~~l~~g-----------------~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p 260 (435)
T 4e54_B 200 RVFASSDT--INIWFCSLDVSASSRMVVTG-----------------DNVGNVILLNMDGKELWNLRMHKKKVTHVALNP 260 (435)
T ss_dssp EEEECCSS--CSCCCCCEEEETTTTEEEEE-----------------CSSSBEEEEESSSCBCCCSBCCSSCEEEEEECT
T ss_pred eEEeccCC--CCccEEEEEECCCCCEEEEE-----------------eCCCcEeeeccCcceeEEEecccceEEeeeecC
Confidence 44432211 11234578899999877753 256788889887544332222222346789999
Q ss_pred CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 229 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 229 dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++.++++...+..|..+++...+.................++++++|++.++...
T Consensus 261 ~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 261 CCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp TCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred CCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcC
Confidence 98877777666677878887643211110111111222456778889987666544
No 193
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.44 E-value=9.8e-05 Score=67.77 Aligned_cols=182 Identities=10% Similarity=0.069 Sum_probs=105.8
Q ss_pred CccEEEcCCCc-EEEEecCCeEEEEe--CCceE-E--EEecC-CCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC-cEE
Q 017371 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGTWV-N--WKFID-SQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VEN 150 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~-~--~~~~~-~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g-~~~ 150 (372)
...+++.++|. |..+..+|.|..|+ +++.. . ..... .... .+++.|+|+++++... ..+..++ ..+ .+.
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVR-KVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEE-EEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 45789999986 45566899999888 44432 1 11112 2345 8999999986666444 4466666 444 332
Q ss_pred EeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe-EEE--EeCC-ccCcceEEE
Q 017371 151 FLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-TTL--VADG-FYFANGVAL 226 (372)
Q Consensus 151 l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~-~~~--~~~~-~~~~~gi~~ 226 (372)
+.. ..+. ...+..+++.++|++.++-+ .++.|..+|..+++ .+. .... ......+++
T Consensus 98 ~~~-~~~h-~~~v~~v~~sp~~~~l~s~s-----------------~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 98 VTT-LEGH-ENEVKSVAWAPSGNLLATCS-----------------RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp EEE-ECCC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred EEE-ccCC-CCCceEEEEeCCCCEEEEEE-----------------CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 221 1221 13567899999998777632 45667777765442 111 2222 233457889
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+|+++.+..+. .+..|..++...........+. ...+....++++++|++.++...
T Consensus 159 ~p~~~~l~s~s-~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 159 HPSQELLASAS-YDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp CSSSSCEEEEE-TTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCEEEEEe-CCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCCCEEEEEeC
Confidence 99998555544 4566777776542111111221 22334567889999987766544
No 194
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.44 E-value=1.6e-06 Score=83.90 Aligned_cols=75 Identities=17% Similarity=0.165 Sum_probs=57.8
Q ss_pred cccccccceEEccCCcEEE-EeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC--ccCcceEEEecCCCEEE
Q 017371 158 SKLRFANDVVEASDGSLYF-TVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYVV 234 (372)
Q Consensus 158 ~~~~~~~~l~~d~dG~i~v-td~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--~~~~~gi~~~~dg~~l~ 234 (372)
..+..|++|++|++|+||| +|.+ |+... ..+......||++++++|+++.++.. ...++|++|+||++.||
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~--~~~~g----~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGD--SSNAG----DFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCC--CCCSG----GGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CccCCCCceEECCCCCEEEEeCCC--cCccc----cccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEE
Confidence 4578999999999999999 7764 22111 12233566899999999999988754 35689999999999999
Q ss_pred EEeC
Q 017371 235 VCES 238 (372)
Q Consensus 235 v~~~ 238 (372)
|+..
T Consensus 547 V~vQ 550 (592)
T 4a9v_A 547 VGIQ 550 (592)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9753
No 195
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.42 E-value=0.00053 Score=64.08 Aligned_cols=170 Identities=8% Similarity=-0.055 Sum_probs=101.3
Q ss_pred cEEEcCCCcEEEEecCCeEEEEe--CCceEEEEec--CCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cEEEeee
Q 017371 83 DASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI--DSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFLSY 154 (372)
Q Consensus 83 ~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~--~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~~l~~~ 154 (372)
.+..++ +.+.++..+|.|+.|+ +++....... .+... .+++.++|+++++... ..+..++ .++ ...+...
T Consensus 98 ~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~-~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 175 (401)
T 4aez_A 98 LLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVA-SVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGH 175 (401)
T ss_dssp CEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEE-EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred EEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEE-EEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCC
Confidence 355554 5677888899999999 5655443332 23345 8999999976655443 4477777 555 3333211
Q ss_pred cCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC-Ce-EEEEeCCccCcceEEEecCCCE
Q 017371 155 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NI-TTLVADGFYFANGVALSRDEDY 232 (372)
Q Consensus 155 ~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t-~~-~~~~~~~~~~~~gi~~~~dg~~ 232 (372)
...+..+++ ++++.++- ..++.|..+|..+ +. ...+.........++++++++.
T Consensus 176 -----~~~v~~~~~--~~~~l~~~-----------------~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 231 (401)
T 4aez_A 176 -----QARVGCLSW--NRHVLSSG-----------------SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQ 231 (401)
T ss_dssp -----SSCEEEEEE--ETTEEEEE-----------------ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred -----CCceEEEEE--CCCEEEEE-----------------cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCE
Confidence 123455666 34454442 2567888888763 22 3333333344567899999986
Q ss_pred EEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEE
Q 017371 233 VVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 282 (372)
Q Consensus 233 l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~ 282 (372)
++.+. .++.|..+++...+ ....+. ...+....+++.++|. +.++.
T Consensus 232 l~s~~-~d~~v~iwd~~~~~--~~~~~~-~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 232 LASGG-NDNVVQIWDARSSI--PKFTKT-NHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp EEEEE-TTSCEEEEETTCSS--EEEEEC-CCSSCCCEEEECTTSTTEEEEE
T ss_pred EEEEe-CCCeEEEccCCCCC--ccEEec-CCcceEEEEEECCCCCCEEEEe
Confidence 66655 45678888886432 111222 2334467899999874 55544
No 196
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.42 E-value=0.00011 Score=68.08 Aligned_cols=266 Identities=13% Similarity=0.054 Sum_probs=138.2
Q ss_pred CCCCCCCccEEEcC-CCc-EEEEecCCeEEEEe--CCce-EEEE-------------ecCCCcccCeEEcC-CCCEEEEe
Q 017371 75 EGSVNHPEDASMDK-NGV-IYTATRDGWIKRLQ--DGTW-VNWK-------------FIDSQTLVGLTSTK-EGHLIICD 135 (372)
Q Consensus 75 ~g~~~~p~~i~~d~-~G~-l~v~~~~g~i~~~~--~g~~-~~~~-------------~~~~~p~~gl~~d~-dG~l~v~~ 135 (372)
.+.-....++++.+ +|. |++++.+|.|..|+ +++. ..+. ...+... .+++.+ +++++++.
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVE-TVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEE-EEEECTTCTTCEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEE-EEEEccCCCcEEEEE
Confidence 33334567899998 775 55566899999998 3321 1111 0223345 889998 66555554
Q ss_pred C-CCcEEEEc-CCC--cEEEeeecCCcccccccceEEcc---CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC
Q 017371 136 N-ANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEAS---DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS 208 (372)
Q Consensus 136 ~-~~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~---dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t 208 (372)
. ...+..++ .++ ...+. .. .....+.+.+ ++.+.++- ..++.|..+|..+
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~v~~~d~~~ 175 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFN--FE----ETVYSHHMSPVSTKHCLVAVG-----------------TRGPKVQLCDLKS 175 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEE--CS----SCEEEEEECSSCSSCCEEEEE-----------------ESSSSEEEEESSS
T ss_pred eCCCeEEEeeCCCCccceecc--CC----CceeeeEeecCCCCCcEEEEE-----------------cCCCeEEEEeCCC
Confidence 3 44477777 555 22221 11 1233455554 34455542 2467788888876
Q ss_pred CeEEEEeCC-ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeee-----------c---cCCCCCCceeEEc
Q 017371 209 NITTLVADG-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETF-----------A---ENLPGAPDNINLA 273 (372)
Q Consensus 209 ~~~~~~~~~-~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~-----------~---~~~~g~p~~i~~d 273 (372)
++....... ......++++|++++++++...++.|..+++...... ...+ . ....+....+++.
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGC-LITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCC-SEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcc-cccccccccccceeeccccccccCceeEEEEc
Confidence 654443333 2334678999999876666666777888888643211 0111 0 1122235568889
Q ss_pred CCCCEEEEEec-CchhHHHHhhcchhHHHHHHh----cCccc---------cccccCCCceEEEEEC-CCCcEEEEEECC
Q 017371 274 PDGTFWIAIIK-LDARRMKILNSSKLIKHVLAA----YPKLF---------SQFITLGGGAHLIHVA-EDGTIIRNLVDP 338 (372)
Q Consensus 274 ~~G~lwva~~~-~~~~~~~~~~~~~~~r~~~~~----~p~~~---------~~~~~~~~~~~v~~~~-~~g~~~~~~~~~ 338 (372)
++|++.++... ....++++-..... ...... ..... ..+......+.+..++ .+++.+..+...
T Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 333 (408)
T 4a11_B 255 SDGLHLLTVGTDNRMRLWNSSNGENT-LVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGH 333 (408)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCBC-CCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred CCCCEEEEecCCCeEEEEECCCCccc-eeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccC
Confidence 99976555443 23333333211110 000000 00000 0011122344555565 456666666543
Q ss_pred CCCeeccceeeEEE-CC-EEEEEeCCCCeEEEEeC
Q 017371 339 TGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQL 371 (372)
Q Consensus 339 ~g~~~~~~t~~~~~-~g-~L~igs~~~~~i~~~~~ 371 (372)
.+ .++++... ++ .|+.++ ....|.++++
T Consensus 334 ~~----~v~~~~~s~~~~~l~s~~-~dg~i~iw~~ 363 (408)
T 4a11_B 334 YK----TVDCCVFQSNFQELYSGS-RDCNILAWVP 363 (408)
T ss_dssp SS----CEEEEEEETTTTEEEEEE-TTSCEEEEEE
T ss_pred CC----eEEEEEEcCCCCEEEEEC-CCCeEEEEeC
Confidence 32 46777776 34 455555 4456777664
No 197
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.42 E-value=6.7e-05 Score=69.71 Aligned_cols=190 Identities=9% Similarity=0.061 Sum_probs=121.7
Q ss_pred CCCCCccEEEcCCCcEEEEecC----------------CeEEEEe--CC--c-eEEEEec------CCCcccCeEEc-C-
Q 017371 77 SVNHPEDASMDKNGVIYTATRD----------------GWIKRLQ--DG--T-WVNWKFI------DSQTLVGLTST-K- 127 (372)
Q Consensus 77 ~~~~p~~i~~d~~G~l~v~~~~----------------g~i~~~~--~g--~-~~~~~~~------~~~p~~gl~~d-~- 127 (372)
.+..+..+.+|+.|+||+-|.. -+|+.|| ++ + ++++..+ ..... .+++| .
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~-di~VD~~~ 163 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFG-GFAVDVAN 163 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEE-EEEEEESC
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccc-eEEEeccc
Confidence 3778889999999999998821 1588898 44 3 4444332 12334 78888 2
Q ss_pred ------CCCEEEEeCC-CcEEEEc-CCC--cEEEeee----------cCCccc---ccccceEEccC----C-cEEEEeC
Q 017371 128 ------EGHLIICDNA-NGLHKVS-EDG--VENFLSY----------VNGSKL---RFANDVVEASD----G-SLYFTVS 179 (372)
Q Consensus 128 ------dG~l~v~~~~-~gv~~~~-~~g--~~~l~~~----------~~~~~~---~~~~~l~~d~d----G-~i~vtd~ 179 (372)
++.+||+|.. .||+++| .+| .+.+... ..|..+ ..+.+|+.+++ + .+|+.-.
T Consensus 164 ~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl 243 (381)
T 3q6k_A 164 PKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG 243 (381)
T ss_dssp TTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES
T ss_pred CCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC
Confidence 4569999975 6899999 777 5554211 112222 35678888876 3 6888754
Q ss_pred CCCCCCcccccccccccCCCeEEEEeC------C-CCeEEEEeCCccCcc--eEEEecCCCEEEEEeCCCCeEEEEEccC
Q 017371 180 SSKYLPHEYCLDILEGKPHGQLLKYDP------S-SNITTLVADGFYFAN--GVALSRDEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~g~v~~~d~------~-t~~~~~~~~~~~~~~--gi~~~~dg~~l~v~~~~~~~i~~~~~~g 250 (372)
+ ..++|++.. . ..+++.+.+...... +.++++..+.||+++...+.|.+++.++
T Consensus 244 s-----------------s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 244 S-----------------AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp S-----------------CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred C-----------------CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 2 335777641 1 134444433322234 4566633446999999999999999876
Q ss_pred -CC-CcceeeeccC-CCCCCceeEEcCCCCEEEEEec
Q 017371 251 -ER-KGKLETFAEN-LPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 251 -~~-~~~~~~~~~~-~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+- ....+.+... .--+|+++.+|.+|+||+....
T Consensus 307 ~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 307 MPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp CSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 31 1333444332 2247999999999999999865
No 198
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.40 E-value=0.0004 Score=70.03 Aligned_cols=182 Identities=11% Similarity=0.092 Sum_probs=110.7
Q ss_pred CCCccEEEcCCCcE-EEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC--cEEE
Q 017371 79 NHPEDASMDKNGVI-YTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG--VENF 151 (372)
Q Consensus 79 ~~p~~i~~d~~G~l-~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g--~~~l 151 (372)
....++++.++|.+ ..++.+|.|..|+ +++. ..+....+... ++++.++|+.+++... ..+..++..+ ...+
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL-SVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI 509 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEECCCCcceee
Confidence 34567889998864 4556899999999 4543 33333334455 8999999976555443 4577777333 2222
Q ss_pred eeecCCcccccccceEEccCC--cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cCcceEEEec
Q 017371 152 LSYVNGSKLRFANDVVEASDG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVALSR 228 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG--~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~~~gi~~~~ 228 (372)
.....+ ....+..+++.+++ ...++- ..++.|..+|..+++......+. .....++++|
T Consensus 510 ~~~~~~-h~~~v~~~~~~~~~~~~~l~s~-----------------s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 571 (694)
T 3dm0_A 510 SEGGEG-HRDWVSCVRFSPNTLQPTIVSA-----------------SWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 571 (694)
T ss_dssp CSSTTS-CSSCEEEEEECSCSSSCEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred ccCCCC-CCCcEEEEEEeCCCCcceEEEE-----------------eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC
Confidence 221111 11245678888876 344442 25677888898877765544443 3346789999
Q ss_pred CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 229 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 229 dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
|++.+. +.+.++.|..+++...+ . ...-........+++.++|.+.++...
T Consensus 572 dg~~l~-sg~~Dg~i~iwd~~~~~---~-~~~~~~~~~v~~~~~sp~~~~l~~~~~ 622 (694)
T 3dm0_A 572 DGSLCA-SGGKDGVVLLWDLAEGK---K-LYSLEANSVIHALCFSPNRYWLCAATE 622 (694)
T ss_dssp TSSEEE-EEETTSBCEEEETTTTE---E-EECCBCSSCEEEEEECSSSSEEEEEET
T ss_pred CCCEEE-EEeCCCeEEEEECCCCc---e-EEEecCCCcEEEEEEcCCCcEEEEEcC
Confidence 998554 44456678888875431 1 111112234567889999887776654
No 199
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.40 E-value=8.6e-05 Score=75.96 Aligned_cols=179 Identities=11% Similarity=0.068 Sum_probs=109.5
Q ss_pred CCccEEEcCCCc-EEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEE-eCCCcEEEEc-CCC--cEEE
Q 017371 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENF 151 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~-~~~~gv~~~~-~~g--~~~l 151 (372)
...++++.++|. |.+++.+|.|..|+ +++. ..+....+... .+++.++|..+++ .....+..++ .++ ....
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE
Confidence 466788998885 66677899999999 5543 33333334456 8999999975554 4334466677 444 2111
Q ss_pred eeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE-eCCc-cCcceEEEec
Q 017371 152 LSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADGF-YFANGVALSR 228 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~-~~~~-~~~~gi~~~~ 228 (372)
..... ..+..+++.+ +|+.+++-. .++.|..+|..+++.... .... ...+.+++++
T Consensus 136 ~~~~~----~~v~~~~~~p~~~~~l~~~~-----------------~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 194 (814)
T 3mkq_A 136 FEGHE----HFVMCVAFNPKDPSTFASGC-----------------LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYP 194 (814)
T ss_dssp EECCS----SCEEEEEEETTEEEEEEEEE-----------------TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECC
T ss_pred EcCCC----CcEEEEEEEcCCCCEEEEEe-----------------CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEE
Confidence 11111 2456788988 776666522 467888898765543332 2222 4456788998
Q ss_pred --CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 229 --DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 229 --dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++.++.+ ..++.|..+++...+ ....+. ...+....+++.++|++.++...
T Consensus 195 ~~~~~~l~~~-~~dg~i~~~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 248 (814)
T 3mkq_A 195 LPDKPYMITA-SDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGSE 248 (814)
T ss_dssp STTCCEEEEE-CTTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEET
T ss_pred CCCCCEEEEE-eCCCEEEEEECCCCc--EEEEEc-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 88855554 456688888875432 122222 22233567888999986666554
No 200
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.40 E-value=9.1e-05 Score=67.89 Aligned_cols=182 Identities=9% Similarity=-0.066 Sum_probs=109.1
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCceEEEE---ecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--c
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWK---FIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--V 148 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~~~---~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~ 148 (372)
....++++.++|. |+++..+|.|..|+ +++..... ....... .+++.++|+++++... ..+..++ ..+ .
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR-CVRWAPNEKKFAVGSGSRVISICYFEQENDW 131 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEE-EEEECTTSSEEEEEETTSSEEEEEEETTTTE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCcee-EEEECCCCCEEEEEeCCCEEEEEEecCCCcc
Confidence 3567899998885 55566889999998 55533222 1223445 8999999976655433 4466666 333 2
Q ss_pred EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCC------------------CCe
Q 017371 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS------------------SNI 210 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~------------------t~~ 210 (372)
...... .......+..+++.++|+.+++-. .++.|..+|.. +++
T Consensus 132 ~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (372)
T 1k8k_C 132 WVCKHI-KKPIRSTVLSLDWHPNSVLLAAGS-----------------CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 193 (372)
T ss_dssp EEEEEE-CTTCCSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred eeeeee-ecccCCCeeEEEEcCCCCEEEEEc-----------------CCCCEEEEEcccccccccccccccccccchhh
Confidence 222211 111123567899999998766532 45677778732 344
Q ss_pred EEEEeC-CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 017371 211 TTLVAD-GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 211 ~~~~~~-~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~ 283 (372)
...... .......++++++++.++.+. .++.|..|++...+ ....+. ........++++++|.+.++..
T Consensus 194 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 263 (372)
T 1k8k_C 194 LMFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADADKKM--AVATLA-SETLPLLAVTFITESSLVAAGH 263 (372)
T ss_dssp EEEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGGTT--EEEEEE-CSSCCEEEEEEEETTEEEEEET
T ss_pred heEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc--eeEEEc-cCCCCeEEEEEecCCCEEEEEe
Confidence 333332 223356789999998666655 56689889886432 122222 2222356788888887666653
No 201
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.40 E-value=4.7e-05 Score=76.25 Aligned_cols=177 Identities=10% Similarity=-0.020 Sum_probs=100.9
Q ss_pred CCC-c-EEEEe-cCCeEEEEe-C----CceEEEEec-----CCCcccCeEEcCCCC-EEEEeCC----------CcEEEE
Q 017371 88 KNG-V-IYTAT-RDGWIKRLQ-D----GTWVNWKFI-----DSQTLVGLTSTKEGH-LIICDNA----------NGLHKV 143 (372)
Q Consensus 88 ~~G-~-l~v~~-~~g~i~~~~-~----g~~~~~~~~-----~~~p~~gl~~d~dG~-l~v~~~~----------~gv~~~ 143 (372)
||| . |+++. .+.+|+.++ + ++.+.+... ..... +++++|||+ |+++... ..|+.+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~-~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWA-DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEE-EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCcccc-CcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 777 4 56665 467899998 7 555554331 23445 889999997 4444322 247788
Q ss_pred c-CC------C-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCC-CC---e
Q 017371 144 S-ED------G-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SN---I 210 (372)
Q Consensus 144 ~-~~------g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-t~---~ 210 (372)
+ .+ + .+.+.. .+ ......+++.+||+ |+++.... . ...-....|+.+|.+ ++ +
T Consensus 167 ~~~~~~~~~~~~~~~l~~--~~--~~~~~~~~~SpDG~~la~~~~~~--~--------~~~~~~~~i~~~d~~~~g~~~~ 232 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSD--DA--HRFVTGPRLSPDGRQAVWLAWDH--P--------RMPWEGTELKTARVTEDGRFAD 232 (662)
T ss_dssp ETTSTTTTCGGGSEESSC--SC--SSEECCCEECTTSSEEEEEEECT--T--------CCTTTCEEEEEEEECTTSCEEE
T ss_pred ECCCCccccCCceeEEEe--cC--CCcccCceECCCCCEEEEEECCC--C--------CCCCCCcEEEEEEECCCCcccc
Confidence 8 55 6 444320 11 12456788999996 54442210 0 000012479999987 56 5
Q ss_pred EEEEeCC-ccCcceEEEecCCCEEEEEeCCCC--eEEEEEccCCCCcceeeeccCCCC------C--CceeEEcCCCCEE
Q 017371 211 TTLVADG-FYFANGVALSRDEDYVVVCESWKF--RCRKYWLKGERKGKLETFAENLPG------A--PDNINLAPDGTFW 279 (372)
Q Consensus 211 ~~~~~~~-~~~~~gi~~~~dg~~l~v~~~~~~--~i~~~~~~g~~~~~~~~~~~~~~g------~--p~~i~~d~~G~lw 279 (372)
.+.+..+ ......++|+|||+ +|++...++ +|+++++++.+ ...+...... . ...+++.++|.++
T Consensus 233 ~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~ 308 (662)
T 3azo_A 233 TRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLWTPGMRWFAPLANGLIA 308 (662)
T ss_dssp EEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCCSTTCCSEEECTTSCEE
T ss_pred cEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc---eeecccccccccCccccccCceEeEeCCCEEE
Confidence 5555443 24456788999999 665554444 78888875432 1122111000 0 2356777788877
Q ss_pred EEEe
Q 017371 280 IAII 283 (372)
Q Consensus 280 va~~ 283 (372)
+...
T Consensus 309 ~~~~ 312 (662)
T 3azo_A 309 VVHG 312 (662)
T ss_dssp EEEB
T ss_pred EEEE
Confidence 6654
No 202
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.40 E-value=0.00029 Score=63.32 Aligned_cols=229 Identities=11% Similarity=0.014 Sum_probs=132.1
Q ss_pred CccEEEcCCCc-EEEEecCCeEEEEe--CCc-eEEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCCcEEEeee
Q 017371 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDGVENFLSY 154 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~-~~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g~~~l~~~ 154 (372)
..++++.++|. |..+..++.|..|+ +++ ...+....+... .+++.|++.++++... ..+..++ .++..... .
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~-~ 135 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ-T 135 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEEGGGTTEEEE-E
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEE-EEEEcCCCCEEEEECCCCeEEEEECCCCcchhh-h
Confidence 45677777775 55666899999999 454 333433334456 8999999987666444 4477777 54411111 1
Q ss_pred cCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE-EeCCc-cCcceEEEec--C
Q 017371 155 VNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGF-YFANGVALSR--D 229 (372)
Q Consensus 155 ~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~-~~~~~-~~~~gi~~~~--d 229 (372)
..+. ...+..+++.+ ++.++++- ..++.|..+|..+++... +..+. ...+.+.+.+ +
T Consensus 136 ~~~h-~~~v~~v~~~p~~~~~l~sg-----------------s~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (304)
T 2ynn_A 136 FEGH-EHFVMCVAFNPKDPSTFASG-----------------CLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD 197 (304)
T ss_dssp ECCC-CSCEEEEEECTTCTTEEEEE-----------------ETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTT
T ss_pred hccc-CCcEEEEEECCCCCCEEEEE-----------------eCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCC
Confidence 1111 13467889988 56766652 256778888875443222 22221 2234456665 6
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCcc
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKL 309 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~ 309 (372)
+++ +++.+.++.|..+++...+ ....+. ........+++.+++.+.++...
T Consensus 198 ~~~-l~s~s~D~~i~iWd~~~~~--~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~------------------------- 248 (304)
T 2ynn_A 198 KPY-MITASDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGSE------------------------- 248 (304)
T ss_dssp CCE-EEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEET-------------------------
T ss_pred CCE-EEEEcCCCeEEEEeCCCCc--cceeeC-CCCCCEEEEEECCCCCEEEEEcC-------------------------
Confidence 664 4455556778888875431 112222 22233456788999987776655
Q ss_pred ccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE--CCEEEEEeCCCCeEEEEeC
Q 017371 310 FSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV--DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 310 ~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~--~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|...|. +++.+..+....+ .+.++... ++..|+++-..+.+.++++
T Consensus 249 ---------Dg~i~iWd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~asg~~~g~~~~~~ 300 (304)
T 2ynn_A 249 ---------DGTLKIWNSSTYKVEKTLNVGLE----RSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (304)
T ss_dssp ---------TSCEEEEETTTCCEEEEECCSSS----SEEEEEECTTCGGGCEEEEETTEEEEEEC
T ss_pred ---------CCeEEEEECCCCceeeeccCCCc----cEEEEEECCCCCceEEEEecCCceEEEEe
Confidence 456666664 4777777654332 35556544 3345555555666766654
No 203
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.40 E-value=0.00014 Score=66.61 Aligned_cols=185 Identities=14% Similarity=0.104 Sum_probs=106.7
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCceEEE---EecCCCcccCeEEcCC--CCEEEEeCC-CcEEEEc-CCC-
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNW---KFIDSQTLVGLTSTKE--GHLIICDNA-NGLHKVS-EDG- 147 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~~---~~~~~~p~~gl~~d~d--G~l~v~~~~-~gv~~~~-~~g- 147 (372)
....++++.++|. |.++..+|.|..|+ .+..+.. ....+... .+++.++ ++++++... ..|..++ .++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENGR 90 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSCEEEEEEETTE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEE-EEEeCCCCCCCEEEEeccCCEEEEEEcCCCc
Confidence 3566789999885 55555899999988 3333322 22223345 8888766 776655444 4477777 555
Q ss_pred cEEEeeecCCcccccccceEEccC--CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe---EEEEeCCccCcc
Q 017371 148 VENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFAN 222 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~d--G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~---~~~~~~~~~~~~ 222 (372)
...+... .+. ...+..+++.++ |++.++-. .++.|..+|..+++ ...+........
T Consensus 91 ~~~~~~~-~~~-~~~v~~~~~~~~~~~~~l~~~~-----------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 91 WSQIAVH-AVH-SASVNSVQWAPHEYGPLLLVAS-----------------SDGKVSVVEFKENGTTSPIIIDAHAIGVN 151 (379)
T ss_dssp EEEEEEE-CCC-SSCEEEEEECCGGGCSEEEEEE-----------------TTSEEEEEECCTTSCCCEEEEECCTTCEE
T ss_pred eeEeeee-cCC-CcceEEEEeCCCCCCCEEEEec-----------------CCCcEEEEecCCCCceeeEEecCCCCceE
Confidence 3333221 111 135678899888 77666522 46788888876552 222222233346
Q ss_pred eEEEec-------------CCCEEEEEeCCCCeEEEEEccCCCCcc-eeeeccCCCCCCceeEEcCC---CCEEEEEec
Q 017371 223 GVALSR-------------DEDYVVVCESWKFRCRKYWLKGERKGK-LETFAENLPGAPDNINLAPD---GTFWIAIIK 284 (372)
Q Consensus 223 gi~~~~-------------dg~~l~v~~~~~~~i~~~~~~g~~~~~-~~~~~~~~~g~p~~i~~d~~---G~lwva~~~ 284 (372)
.++++| +++.++.+. .++.|..|++....... .........+....+++.++ |++.++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEE-TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred EEEEcCccccccccccCCCCCCEEEEEe-CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 788888 677555554 46678888876432211 11111122334567889998 666665544
No 204
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.39 E-value=6e-06 Score=76.43 Aligned_cols=184 Identities=7% Similarity=-0.049 Sum_probs=100.9
Q ss_pred CCccEEEcCCCcEEE-EecCCeEEEEe--CCceEE---EEecCCCcccCeEEcCCCCEEEEeC-CCcEEEEc-CCCc--E
Q 017371 80 HPEDASMDKNGVIYT-ATRDGWIKRLQ--DGTWVN---WKFIDSQTLVGLTSTKEGHLIICDN-ANGLHKVS-EDGV--E 149 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v-~~~~g~i~~~~--~g~~~~---~~~~~~~p~~gl~~d~dG~l~v~~~-~~gv~~~~-~~g~--~ 149 (372)
...++++.++|.+.+ +..+|.|..|+ ++.++. +....+... .+++.++|+++++.. +..+..++ .++. .
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVT-CVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEE-EEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEE-EEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 456889999887554 44788888888 453222 222223345 899999997555543 34466666 3332 1
Q ss_pred EEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe----EEEEeC-CccCcceE
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI----TTLVAD-GFYFANGV 224 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~----~~~~~~-~~~~~~gi 224 (372)
..... .+ ....+..+++.++|+..++-. .++.|..+|..+++ ...+.. .-.....+
T Consensus 92 ~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~ 152 (377)
T 3dwl_C 92 QTLVL-LR-LNRAATFVRWSPNEDKFAVGS-----------------GARVISVCYFEQENDWWVSKHLKRPLRSTILSL 152 (377)
T ss_dssp CEEEC-CC-CSSCEEEEECCTTSSCCEEEE-----------------SSSCEEECCC-----CCCCEEECSSCCSCEEEE
T ss_pred eeeEe-cc-cCCceEEEEECCCCCEEEEEe-----------------cCCeEEEEEECCcccceeeeEeecccCCCeEEE
Confidence 11111 11 113566888999987655422 45678888876654 233332 23345678
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEccCCCCcc------------eeeecc--CCCCCCceeEEcCCCCEEEEEec
Q 017371 225 ALSRDEDYVVVCESWKFRCRKYWLKGERKGK------------LETFAE--NLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 225 ~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~------------~~~~~~--~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++|+++.++.+. .++.|..+++....... ...... ...+....++++++|++.++...
T Consensus 153 ~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 225 (377)
T 3dwl_C 153 DWHPNNVLLAAGC-ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGH 225 (377)
T ss_dssp EECTTSSEEEEEE-SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEET
T ss_pred EEcCCCCEEEEEe-CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeC
Confidence 9999998666554 45668888874221100 011111 12233567889999986665544
No 205
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.39 E-value=0.0005 Score=63.30 Aligned_cols=183 Identities=10% Similarity=0.070 Sum_probs=110.9
Q ss_pred CCCCCCCccEEEcCCCc-EEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCCCc-EEEEc-CC--
Q 017371 75 EGSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-ED-- 146 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~~g-v~~~~-~~-- 146 (372)
.|.-....++++.++|. |..++.||.|..|+ .++. ..+........ .+++.|+|.++++....+ +..++ ..
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~-~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVM-ACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC-EEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEE-EEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence 34445567899999885 55566899999999 4443 33333444556 899999999877765544 44443 21
Q ss_pred --C----cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCcc-
Q 017371 147 --G----VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY- 219 (372)
Q Consensus 147 --g----~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~- 219 (372)
+ ...+.. ....+..+++.+++...++- ..++.|..+|..+++......+..
T Consensus 140 ~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~t~-----------------s~D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 140 NENMAAKKKSVAM-----HTNYLSACSFTNSDMQILTA-----------------SGDGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp TCCSGGGCEEEEE-----CSSCEEEEEECSSSSEEEEE-----------------ETTSEEEEEETTTCCEEEEEECCSS
T ss_pred cccccccceeeec-----cCCcEEEEEEeCCCCEEEEE-----------------eCCCcEEEEeCCCCeEEEEEcCCCC
Confidence 1 111110 01245678888888766552 256789999988777654443322
Q ss_pred CcceEEEec--CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 220 FANGVALSR--DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 220 ~~~gi~~~~--dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
....+++++ +++.++ +...+..|..+++...+ ....+. ........+++.++|++.++...
T Consensus 198 ~v~~~~~~~~~~g~~l~-sgs~Dg~v~~wd~~~~~--~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFV-SGGCDKKAMVWDMRSGQ--CVQAFE-THESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp CEEEEEECCCSSCCEEE-EEETTSCEEEEETTTCC--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CeEEEEEEeCCCCCEEE-EEeCCCeEEEEECCCCc--EEEEec-CCCCCeEEEEEeCCCCEEEEEeC
Confidence 234566766 456444 44456778888876432 122222 22334567889999987776654
No 206
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.39 E-value=0.00068 Score=61.32 Aligned_cols=178 Identities=12% Similarity=0.130 Sum_probs=107.1
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC--cEEE
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG--VENF 151 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g--~~~l 151 (372)
....++++.++|. |..+..+|.|..|+ +++. ..+....+... .+++.+++.++++... ..+..++..+ ...+
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~ 144 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVM-SVDIDKKASMIISGSRDKTIKVWTIKGQCLATL 144 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSCEEEEEETTSCEEEEETTSCEEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 3456788888885 45566899999999 5553 33333334455 8999999987766544 4466777333 3333
Q ss_pred eeecCCcccccccceEEcc------CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cCcceE
Q 017371 152 LSYVNGSKLRFANDVVEAS------DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGV 224 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~------dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~~~gi 224 (372)
... ...+..+.+.+ ++...++ +..++.|..+|..+++......+. ...+.+
T Consensus 145 ~~h-----~~~v~~~~~~~~~~~~~~~~~l~s-----------------~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~ 202 (319)
T 3frx_A 145 LGH-----NDWVSQVRVVPNEKADDDSVTIIS-----------------AGNDKMVKAWNLNQFQIEADFIGHNSNINTL 202 (319)
T ss_dssp CCC-----SSCEEEEEECCC------CCEEEE-----------------EETTSCEEEEETTTTEEEEEECCCCSCEEEE
T ss_pred ecc-----CCcEEEEEEccCCCCCCCccEEEE-----------------EeCCCEEEEEECCcchhheeecCCCCcEEEE
Confidence 211 11234455554 3334443 225677888888777665544332 334678
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 225 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 225 ~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++|+++.+..+ ..++.|..+++...+. ...+. .......+++.++|.+.++...
T Consensus 203 ~~sp~g~~l~s~-~~dg~i~iwd~~~~~~--~~~~~--~~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 203 TASPDGTLIASA-GKDGEIMLWNLAAKKA--MYTLS--AQDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp EECTTSSEEEEE-ETTCEEEEEETTTTEE--EEEEE--CCSCEEEEEECSSSSEEEEEET
T ss_pred EEcCCCCEEEEE-eCCCeEEEEECCCCcE--EEEec--CCCcEEEEEEcCCCCEEEEEcC
Confidence 999999855544 4566788888764321 11221 1223567889999987666544
No 207
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.39 E-value=0.0003 Score=62.59 Aligned_cols=226 Identities=9% Similarity=0.042 Sum_probs=127.5
Q ss_pred CCCCCCccEEEcCCC-cEEEEecCCeEEEEe--CCceEE-EEecCCCcccCeEEcCCCCEEEEeCCCc-EEEEc-CCC--
Q 017371 76 GSVNHPEDASMDKNG-VIYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNANG-LHKVS-EDG-- 147 (372)
Q Consensus 76 g~~~~p~~i~~d~~G-~l~v~~~~g~i~~~~--~g~~~~-~~~~~~~p~~gl~~d~dG~l~v~~~~~g-v~~~~-~~g-- 147 (372)
+.-....++++ ++| .|++++.+|.|..|+ +++... +....+... .+++.++|+++++....| +..++ .+.
T Consensus 16 ~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLN-SVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEE-EEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEE-EEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 33345667888 555 667777899999999 444333 333334455 899999998666654444 55555 222
Q ss_pred cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE-EeCCccCcceEEE
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFANGVAL 226 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~-~~~~~~~~~gi~~ 226 (372)
.+.+... .+. ...+..+.+ +++..++- ..++.|..+|. ++... +.........+++
T Consensus 94 ~~~~~~~-~~~-~~~i~~~~~--~~~~l~~~-----------------~~d~~i~~~d~--~~~~~~~~~~~~~v~~~~~ 150 (313)
T 3odt_A 94 EDPLYTL-IGH-QGNVCSLSF--QDGVVISG-----------------SWDKTAKVWKE--GSLVYNLQAHNASVWDAKV 150 (313)
T ss_dssp SCC-CEE-CCC-SSCEEEEEE--ETTEEEEE-----------------ETTSEEEEEET--TEEEEEEECCSSCEEEEEE
T ss_pred CCcccch-hhc-ccCEEEEEe--cCCEEEEE-----------------eCCCCEEEEcC--CcEEEecccCCCceeEEEE
Confidence 1111111 111 123456666 34444432 24678888883 44333 3333333456777
Q ss_pred ec-CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHh
Q 017371 227 SR-DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAA 305 (372)
Q Consensus 227 ~~-dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~ 305 (372)
.+ +++.++.+. .++.|..++.. .....+..........+++.++|.+.++...
T Consensus 151 ~~~~~~~l~~~~-~d~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d--------------------- 204 (313)
T 3odt_A 151 VSFSENKFLTAS-ADKTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDGHFISCSND--------------------- 204 (313)
T ss_dssp EETTTTEEEEEE-TTSCEEEEETT----EEEEEECSSCSSCEEEEEEEETTEEEEEETT---------------------
T ss_pred ccCCCCEEEEEE-CCCCEEEEecC----ceEEEEeccCcccEEEEEEcCCCeEEEccCC---------------------
Confidence 77 787666554 45668777732 1222332223344667888888885554443
Q ss_pred cCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 306 YPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 306 ~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
+.|..+|. +++.+..+....+ .++++... +++|+.++ ....|..+++
T Consensus 205 --------------g~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~l~~~~-~dg~v~iwd~ 253 (313)
T 3odt_A 205 --------------GLIKLVDMHTGDVLRTYEGHES----FVYCIKLLPNGDIVSCG-EDRTVRIWSK 253 (313)
T ss_dssp --------------SEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSCEEEEE-TTSEEEEECT
T ss_pred --------------CeEEEEECCchhhhhhhhcCCc----eEEEEEEecCCCEEEEe-cCCEEEEEEC
Confidence 56777774 4777777765433 36666665 45666555 3456666654
No 208
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.38 E-value=0.00056 Score=62.96 Aligned_cols=225 Identities=12% Similarity=0.055 Sum_probs=132.0
Q ss_pred CCccEEEcCCCcEEE-EecCCeEEEEe-C-C-------ceEEEEecCCCcccCeEEcCCCCEEEE-eCCCcEEEEc-CCC
Q 017371 80 HPEDASMDKNGVIYT-ATRDGWIKRLQ-D-G-------TWVNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG 147 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v-~~~~g~i~~~~-~-g-------~~~~~~~~~~~p~~gl~~d~dG~l~v~-~~~~gv~~~~-~~g 147 (372)
...++++.++|...+ +..++.+..++ . + ....+....+... .+++.+++..+++ ..+..+..+| .++
T Consensus 108 ~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~t~s~D~~v~lwd~~~~ 186 (354)
T 2pbi_B 108 WVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLS-ACSFTNSDMQILTASGDGTCALWDVESG 186 (354)
T ss_dssp CCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTC
T ss_pred CEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEE-EEEEeCCCCEEEEEeCCCcEEEEeCCCC
Confidence 456788888886554 44788888876 2 1 1222322233345 8889998865555 4444577777 666
Q ss_pred --cEEEeeecCCcccccccceEEcc--CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cCcc
Q 017371 148 --VENFLSYVNGSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFAN 222 (372)
Q Consensus 148 --~~~l~~~~~~~~~~~~~~l~~d~--dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~~~ 222 (372)
...+... . ..+..+++.+ +|+..++- ..++.|..+|..+++........ ...+
T Consensus 187 ~~~~~~~~h-~----~~v~~~~~~~~~~g~~l~sg-----------------s~Dg~v~~wd~~~~~~~~~~~~h~~~v~ 244 (354)
T 2pbi_B 187 QLLQSFHGH-G----ADVLCLDLAPSETGNTFVSG-----------------GCDKKAMVWDMRSGQCVQAFETHESDVN 244 (354)
T ss_dssp CEEEEEECC-S----SCEEEEEECCCSSCCEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred eEEEEEcCC-C----CCeEEEEEEeCCCCCEEEEE-----------------eCCCeEEEEECCCCcEEEEecCCCCCeE
Confidence 3333211 1 1234555554 56666652 25678999998877765544432 3356
Q ss_pred eEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC-CCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHH
Q 017371 223 GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKH 301 (372)
Q Consensus 223 gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~-~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~ 301 (372)
.++++|+++.++.+ +.+..|..+++...+ ....+... .......+.+.++|++.++...
T Consensus 245 ~v~~~p~~~~l~s~-s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~----------------- 304 (354)
T 2pbi_B 245 SVRYYPSGDAFASG-SDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYN----------------- 304 (354)
T ss_dssp EEEECTTSSEEEEE-ETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEET-----------------
T ss_pred EEEEeCCCCEEEEE-eCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEEC-----------------
Confidence 78999999855544 456678888875431 12222211 1112356888999988777665
Q ss_pred HHHhcCccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CCE-EEEEeCCCCeEEEE
Q 017371 302 VLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNH-LYVISLTSNFIGKV 369 (372)
Q Consensus 302 ~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~-L~igs~~~~~i~~~ 369 (372)
.+.|..+| .+|+.+..+....+ .++++... +++ |..|+ ....|.++
T Consensus 305 -----------------d~~i~vwd~~~~~~~~~l~~h~~----~v~~l~~spdg~~l~sgs-~D~~v~vW 353 (354)
T 2pbi_B 305 -----------------DYTINVWDVLKGSRVSILFGHEN----RVSTLRVSPDGTAFCSGS-WDHTLRVW 353 (354)
T ss_dssp -----------------TSCEEEEETTTCSEEEEECCCSS----CEEEEEECTTSSCEEEEE-TTSEEEEE
T ss_pred -----------------CCcEEEEECCCCceEEEEECCCC----cEEEEEECCCCCEEEEEc-CCCCEEec
Confidence 35666677 36777776654332 47777775 444 44444 34455443
No 209
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.35 E-value=6.9e-05 Score=70.10 Aligned_cols=182 Identities=15% Similarity=0.077 Sum_probs=113.5
Q ss_pred CCCccEEEcCCC-c-EEEEecCCeEEEEe--CCceEEEE--e-cCCCcccCeEEcCCCCEEEEe-CCCcEEEEc-CCC--
Q 017371 79 NHPEDASMDKNG-V-IYTATRDGWIKRLQ--DGTWVNWK--F-IDSQTLVGLTSTKEGHLIICD-NANGLHKVS-EDG-- 147 (372)
Q Consensus 79 ~~p~~i~~d~~G-~-l~v~~~~g~i~~~~--~g~~~~~~--~-~~~~p~~gl~~d~dG~l~v~~-~~~gv~~~~-~~g-- 147 (372)
....++++.++| . |+.++.+|.|..|+ +++..... . ..+... .+++.++|+++++. .+..+..+| .++
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY-SVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEE-EEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceE-EEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 356678899887 3 55666899999999 55433322 2 223345 89999999755554 444577788 566
Q ss_pred cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeE---EEEeCCccCcceE
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT---TLVADGFYFANGV 224 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~---~~~~~~~~~~~gi 224 (372)
...+.....+ ..+..+++.++|+++++-.+ ...++.|..+|..+++. ............+
T Consensus 211 ~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 211 VAEKDRPHEG---TRPVHAVFVSEGKILTTGFS--------------RMSERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp EEEEECSSCS---SSCCEEEECSTTEEEEEEEC--------------TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred eeeeccCCCC---CcceEEEEcCCCcEEEEecc--------------CCCCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 3322111111 23567889999987775310 02467889999876442 1122233445678
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEccCCC--CcceeeeccCCCCCCceeEEcCCCCEEE
Q 017371 225 ALSRDEDYVVVCESWKFRCRKYWLKGER--KGKLETFAENLPGAPDNINLAPDGTFWI 280 (372)
Q Consensus 225 ~~~~dg~~l~v~~~~~~~i~~~~~~g~~--~~~~~~~~~~~~g~p~~i~~d~~G~lwv 280 (372)
++++|++.++++...++.|..|++...+ ......+. ..+...++++.++|.+.+
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~--~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS--SKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC--CSSCCSEEEECCGGGSCG
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc--cCCcccceEEecccccce
Confidence 9999999998888777889999887643 11222221 223467888888876544
No 210
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.35 E-value=0.00032 Score=66.74 Aligned_cols=151 Identities=10% Similarity=0.038 Sum_probs=92.7
Q ss_pred CCccEEEcCCCcE--EEEecCCeEEEEe-C---Cc-eEEEE--ecCCCcccCeEEcCCCCEEEE-eCCCcEEEEc-CCC-
Q 017371 80 HPEDASMDKNGVI--YTATRDGWIKRLQ-D---GT-WVNWK--FIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG- 147 (372)
Q Consensus 80 ~p~~i~~d~~G~l--~v~~~~g~i~~~~-~---g~-~~~~~--~~~~~p~~gl~~d~dG~l~v~-~~~~gv~~~~-~~g- 147 (372)
...++++.++|.. +++..+|.|..|+ . ++ ...+. .....+. ++++.++|+.+++ +....++.++ .++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPN-AISIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCce-EEEEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence 4678999999965 3444789898888 4 33 33332 2234566 9999999975544 4434477777 444
Q ss_pred cEE-EeeecCCcccccccceEEccC---CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE-eCC-ccCc
Q 017371 148 VEN-FLSYVNGSKLRFANDVVEASD---GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV-ADG-FYFA 221 (372)
Q Consensus 148 ~~~-l~~~~~~~~~~~~~~l~~d~d---G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~-~~~-~~~~ 221 (372)
... ......+ ....+..+++.++ |++.++-+ .++.|..+|..+++.... ..+ ....
T Consensus 183 ~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~-----------------~d~~i~vwd~~~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 183 EEKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITSD-----------------RDEHIKISHYPQCFIVDKWLFGHKHFV 244 (450)
T ss_dssp CSSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEE-----------------TTSCEEEEEESCTTCEEEECCCCSSCE
T ss_pred cccccceeeec-ccCceEEEEEcCCCCCCcEEEEEc-----------------CCCcEEEEECCCCceeeeeecCCCCce
Confidence 211 0001111 1134668899998 87666532 456788888766654332 322 2345
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCC
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGE 251 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~ 251 (372)
..++|+ |++.++.+. .++.|..+++...
T Consensus 245 ~~~~~s-d~~~l~s~~-~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 245 SSICCG-KDYLLLSAG-GDDKIFAWDWKTG 272 (450)
T ss_dssp EEEEEC-STTEEEEEE-SSSEEEEEETTTC
T ss_pred EEEEEC-CCCEEEEEe-CCCeEEEEECCCC
Confidence 678999 998666554 5678888888654
No 211
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.35 E-value=0.00017 Score=65.67 Aligned_cols=232 Identities=10% Similarity=-0.012 Sum_probs=130.9
Q ss_pred CCccEEEcCC----C-cEEEEecCCeEEEEe--CCceE-EEEecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEc-CCC-
Q 017371 80 HPEDASMDKN----G-VIYTATRDGWIKRLQ--DGTWV-NWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVS-EDG- 147 (372)
Q Consensus 80 ~p~~i~~d~~----G-~l~v~~~~g~i~~~~--~g~~~-~~~~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~-~~g- 147 (372)
...++++.++ | .|+++..+|.|..|+ +++.. .+....+... .+++.+ +++++++... ..|..++ .++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAIN-ELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEE-EEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEE-EEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence 3566778776 4 366677899999999 45433 3332334455 999998 8886666444 4577788 566
Q ss_pred -cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-----------
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA----------- 215 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~----------- 215 (372)
...+.. ..+ ....+..+++.++|+..++-. .++.|..+|..+++.....
T Consensus 150 ~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 210 (366)
T 3k26_A 150 LVAIFGG-VEG-HRDEVLSADYDLLGEKIMSCG-----------------MDHSLKLWRINSKRMMNAIKESYDYNPNKT 210 (366)
T ss_dssp EEEEECS-TTS-CSSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEESCSHHHHHHHHHHHTCCGGGC
T ss_pred EEEEecc-ccc-ccCceeEEEECCCCCEEEEec-----------------CCCCEEEEECCCCccccccceeEEecCCCC
Confidence 332211 011 123567899999998766532 4567888887654321100
Q ss_pred ------------------CCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCc------------ceeeeccCCCC
Q 017371 216 ------------------DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKG------------KLETFAENLPG 265 (372)
Q Consensus 216 ------------------~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~------------~~~~~~~~~~g 265 (372)
........++++ ++ ++++...++.|..+++...... ....+. ...+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 286 (366)
T 3k26_A 211 NRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD-YSQC 286 (366)
T ss_dssp SSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE-CSSC
T ss_pred cccccceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheecccc-ccCC
Confidence 011223467777 55 5555556778888887643210 011111 1222
Q ss_pred CCceeEEcCC--CCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC-Cc----EEEEEECC
Q 017371 266 APDNINLAPD--GTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GT----IIRNLVDP 338 (372)
Q Consensus 266 ~p~~i~~d~~--G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~-g~----~~~~~~~~ 338 (372)
....+++.++ |++.++... .+.|..++.+ ++ ....+...
T Consensus 287 ~v~~~~~s~~~~~~~l~~~~~----------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~ 332 (366)
T 3k26_A 287 DIWYMRFSMDFWQKMLALGNQ----------------------------------VGKLYVWDLEVEDPHKAKCTTLTHH 332 (366)
T ss_dssp CSSCCCCEECTTSSEEEEECT----------------------------------TSCEEEEECCSSSGGGCEEEEECCT
T ss_pred cEEEEEEcCCCCCcEEEEEec----------------------------------CCcEEEEECCCCCCccccceEEccc
Confidence 3456677777 877776654 3556666643 32 33344433
Q ss_pred CCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 339 TGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 339 ~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
. ....++++... ++++.+.......|.++++
T Consensus 333 ~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 364 (366)
T 3k26_A 333 K--CGAAIRQTSFSRDSSILIAVCDDASIWRWDR 364 (366)
T ss_dssp T--CCSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred c--cCCceEEEEeCCCCCeEEEEeCCCEEEEEEe
Confidence 1 12357777776 4544444445567888775
No 212
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.35 E-value=0.00037 Score=74.95 Aligned_cols=183 Identities=15% Similarity=0.103 Sum_probs=111.6
Q ss_pred CCCCccEEEcCCCcE-EEEecCCeEEEEe--CCc-eEEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cE
Q 017371 78 VNHPEDASMDKNGVI-YTATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VE 149 (372)
Q Consensus 78 ~~~p~~i~~d~~G~l-~v~~~~g~i~~~~--~g~-~~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~ 149 (372)
.....++++.++|.+ .++..+|.|..|+ +++ ...+....+... .+++.++|++.++... ..+..++ .+| ..
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVL-CCAFSSDDSYIATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 345667899999854 4556899999999 454 333333334455 8999999987666444 4477788 666 33
Q ss_pred EEeeecCCcccccccceEEccC--CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cCcceEEE
Q 017371 150 NFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVAL 226 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~d--G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~~~gi~~ 226 (372)
.+... ...+..+++.++ +.+.++- ..++.|..+|..+++......+. .....+++
T Consensus 694 ~~~~~-----~~~v~~~~~~~~~~~~~l~sg-----------------~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 751 (1249)
T 3sfz_A 694 TYDEH-----SEQVNCCHFTNKSNHLLLATG-----------------SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRF 751 (1249)
T ss_dssp EEECC-----SSCEEEEEECSSSSCCEEEEE-----------------ETTSCEEEEETTSSSEEEEECCCSSCEEEEEE
T ss_pred EEcCC-----CCcEEEEEEecCCCceEEEEE-----------------eCCCeEEEEECCCcchhheecCCCCCEEEEEE
Confidence 33211 124567788774 3454442 25678889998877755544332 33467899
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeec----------cCCCCCCceeEEcCCCCEEEEEec
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA----------ENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~----------~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+|+++.++.+ +.++.|..+++............ .........+++.++|...++...
T Consensus 752 sp~~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~ 818 (1249)
T 3sfz_A 752 SPDDELLASC-SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK 818 (1249)
T ss_dssp CSSTTEEEEE-ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET
T ss_pred ecCCCEEEEE-ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC
Confidence 9999965554 45667888887643211110000 001113456788999987777654
No 213
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.35 E-value=0.00012 Score=67.67 Aligned_cols=240 Identities=12% Similarity=-0.001 Sum_probs=136.2
Q ss_pred CCccEEEcC-CC-cEEEEecCCeEEEEe-CC-ceEEEEecC---CCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC--cE
Q 017371 80 HPEDASMDK-NG-VIYTATRDGWIKRLQ-DG-TWVNWKFID---SQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG--VE 149 (372)
Q Consensus 80 ~p~~i~~d~-~G-~l~v~~~~g~i~~~~-~g-~~~~~~~~~---~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g--~~ 149 (372)
...++++.+ ++ .|++++.+|.|..++ .+ ....+.... .... .+++.++|+++++... ..+..++.++ ..
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 198 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYC-CVDVSVSRQMLATGDSTGRLLLLGLDGHEIF 198 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEE-EEEEETTTTEEEEEETTSEEEEEETTSCEEE
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeE-EEEECCCCCEEEEECCCCCEEEEECCCCEEE
Confidence 456788887 54 566666899999999 43 444443322 2345 8999999986665444 4466677434 33
Q ss_pred EEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCC----CeEEEEeCCccCcceE
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----NITTLVADGFYFANGV 224 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t----~~~~~~~~~~~~~~gi 224 (372)
.+... ...+..+++.++|. ++++-. .++.|..+|..+ ++.............+
T Consensus 199 ~~~~h-----~~~v~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 256 (383)
T 3ei3_B 199 KEKLH-----KAKVTHAEFNPRCDWLMATSS-----------------VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAA 256 (383)
T ss_dssp EEECS-----SSCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEE
T ss_pred EeccC-----CCcEEEEEECCCCCCEEEEEe-----------------CCCEEEEEeCCCCCcccceEEEecCCCceEEE
Confidence 33211 13567899999997 666532 467788888765 4443333333445678
Q ss_pred EEec-CCCEEEEEeCCCCeEEEEEccCCCCcce-eeeccCCC--CCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHH
Q 017371 225 ALSR-DEDYVVVCESWKFRCRKYWLKGERKGKL-ETFAENLP--GAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIK 300 (372)
Q Consensus 225 ~~~~-dg~~l~v~~~~~~~i~~~~~~g~~~~~~-~~~~~~~~--g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r 300 (372)
+++| +++.++.+. .++.|..|++...+.... ........ ..+-.....+++.+......+....
T Consensus 257 ~~s~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~----------- 324 (383)
T 3ei3_B 257 YFNPTDSTKLLTTD-QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL----------- 324 (383)
T ss_dssp EECTTTSCEEEEEE-SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-----------
T ss_pred EEcCCCCCEEEEEc-CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-----------
Confidence 9999 998666554 567899998865432211 11000000 0122234455555444333210000
Q ss_pred HHHHhcCccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CC-EEEEEeCCCCeEEEEeCC
Q 017371 301 HVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DN-HLYVISLTSNFIGKVQLS 372 (372)
Q Consensus 301 ~~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g-~L~igs~~~~~i~~~~~~ 372 (372)
.....+.|..+| .+++.+..+..... ...++.+... ++ .|..++ ...|.+++++
T Consensus 325 --------------s~s~d~~i~iwd~~~~~~~~~l~~~~~--~~~~~~~~~s~~g~~l~s~s--d~~i~iw~~~ 381 (383)
T 3ei3_B 325 --------------LLNDKRTIDIYDANSGGLVHQLRDPNA--AGIISLNKFSPTGDVLASGM--GFNILIWNRE 381 (383)
T ss_dssp --------------CTTCCCCEEEEETTTCCEEEEECBTTB--CSCCCEEEECTTSSEEEEEE--TTEEEEEECC
T ss_pred --------------ccCCCCeEEEEecCCCceeeeecCCCC--CceEEEEEEecCccEEEEec--CCcEEEEecC
Confidence 122356777777 46888887765321 1234554554 44 454553 5788888764
No 214
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.33 E-value=0.0013 Score=60.04 Aligned_cols=171 Identities=15% Similarity=0.017 Sum_probs=97.0
Q ss_pred CCCcEEEEecCCeEEEEe--CCc-eEEEEecC-CCcccCeEEcC--CCCEEEEeCC-CcEEEEc-CCC-cEEEeeecCCc
Q 017371 88 KNGVIYTATRDGWIKRLQ--DGT-WVNWKFID-SQTLVGLTSTK--EGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGS 158 (372)
Q Consensus 88 ~~G~l~v~~~~g~i~~~~--~g~-~~~~~~~~-~~p~~gl~~d~--dG~l~v~~~~-~gv~~~~-~~g-~~~l~~~~~~~ 158 (372)
.||.+.+-+.++.+..++ .++ ...+.... +... .+++.+ +|+++++... ..+..++ .++ ....... .
T Consensus 93 ~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---~ 168 (343)
T 3lrv_A 93 PCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEII-YMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA---K 168 (343)
T ss_dssp STTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEE-EEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC---C
T ss_pred CCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEE-EEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec---C
Confidence 344444444444444444 333 22332222 2345 899999 9987775444 4577788 556 3222111 1
Q ss_pred ccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEE-EEeCC--ccCcceEEEecCCCEEEE
Q 017371 159 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-LVADG--FYFANGVALSRDEDYVVV 235 (372)
Q Consensus 159 ~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~-~~~~~--~~~~~gi~~~~dg~~l~v 235 (372)
....+..+++.++|.+.++- ..++.|..+|..+++.. ..... ......++|+|++.+|..
T Consensus 169 ~~~~i~~~~~~pdg~~lasg-----------------~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s 231 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLLALY-----------------SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVV 231 (343)
T ss_dssp SSCCCCEEEECTTSCEEEEE-----------------CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEE
T ss_pred CCCceEEEEECCCCCEEEEE-----------------cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEE
Confidence 11246789999999987752 25678999998877643 22222 334467899999997777
Q ss_pred EeCCCCeEEEEEccCCCCc-ceeeeccCCCCCCc---eeEEcCCCCEEEEEe
Q 017371 236 CESWKFRCRKYWLKGERKG-KLETFAENLPGAPD---NINLAPDGTFWIAII 283 (372)
Q Consensus 236 ~~~~~~~i~~~~~~g~~~~-~~~~~~~~~~g~p~---~i~~d~~G~lwva~~ 283 (372)
+. . +.|..+++...+.. ....+.. ...+- .++++++|.+.++..
T Consensus 232 ~~-~-~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~l~~~s 279 (343)
T 3lrv_A 232 EC-D-QTVVCFDLRKDVGTLAYPTYTI--PEFKTGTVTYDIDDSGKNMIAYS 279 (343)
T ss_dssp EE-S-SBEEEEETTSSTTCBSSCCCBC-------CCEEEEECTTSSEEEEEE
T ss_pred Ee-C-CeEEEEEcCCCCcceeeccccc--ccccccceEEEECCCCCEEEEec
Confidence 66 3 37888888654221 1111110 11122 489999998777644
No 215
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.33 E-value=0.00062 Score=64.68 Aligned_cols=174 Identities=12% Similarity=0.045 Sum_probs=98.0
Q ss_pred ccEEEcCCCcEEEEecCCeEEEEe--CCceEE-EEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC--cEEEeeec
Q 017371 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYV 155 (372)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~-~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g--~~~l~~~~ 155 (372)
.++.++ ++.|..++.+|.|..|+ +++... +....+... .+++.+++.|..+..+..+..++ .++ ...+. ..
T Consensus 126 ~~~~~~-~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~-~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~-~h 202 (464)
T 3v7d_B 126 TCLQFE-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVW-ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFE-GH 202 (464)
T ss_dssp EEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECSTTEEEEEETTSCEEEEETTTTEEEEEEC-CC
T ss_pred EEEEEC-CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEE-EEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEEC-CC
Confidence 345565 34777788999999999 555333 322233445 88998888666666555688888 666 33321 11
Q ss_pred CCcccccccceEEc--cCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE--------------------
Q 017371 156 NGSKLRFANDVVEA--SDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-------------------- 213 (372)
Q Consensus 156 ~~~~~~~~~~l~~d--~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~-------------------- 213 (372)
. ..+..+++. ++++..++-+ .++.|..+|..+++...
T Consensus 203 ~----~~v~~l~~~~~~~~~~l~s~s-----------------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
T 3v7d_B 203 N----STVRCLDIVEYKNIKYIVTGS-----------------RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 261 (464)
T ss_dssp S----SCEEEEEEEESSSCEEEEEEE-----------------TTSCEEEEECCCCCCC------CCSSEEESCGGGCTT
T ss_pred C----CccEEEEEecCCCCCEEEEEc-----------------CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeE
Confidence 1 234455655 4555555422 45566666665443111
Q ss_pred ---EeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 214 ---VADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 214 ---~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
...+ ....-.+++++++.++.+. .++.|..+++...+ ....+. ...+....++++++|++.++...
T Consensus 262 ~~~~~~~-~~~~v~~~~~~~~~l~~~~-~d~~i~vwd~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~ 330 (464)
T 3v7d_B 262 FVGVLRG-HMASVRTVSGHGNIVVSGS-YDNTLIVWDVAQMK--CLYILS-GHTDRIYSTIYDHERKRCISASM 330 (464)
T ss_dssp EEEEECC-CSSCEEEEEEETTEEEEEE-TTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEccC-ccceEEEEcCCCCEEEEEe-CCCeEEEEECCCCc--EEEEec-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 1111 1112345678888666655 46678888875431 122222 22334567888999987666654
No 216
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.32 E-value=0.00051 Score=61.06 Aligned_cols=221 Identities=14% Similarity=0.066 Sum_probs=130.1
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CC---c-eEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEcCCC--cE
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DG---T-WVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VE 149 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g---~-~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g--~~ 149 (372)
....++++.++|. |+++..+|.|..++ +. + ...+........ .+.++ .+.++.+.....+..++ .+ ..
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~-~~~l~~~~~d~~i~~~d-~~~~~~ 136 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVC-SLSFQ-DGVVISGSWDKTAKVWK-EGSLVY 136 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEE-EEEEE-TTEEEEEETTSEEEEEE-TTEEEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEE-EEEec-CCEEEEEeCCCCEEEEc-CCcEEE
Confidence 3566788998885 55666899888887 22 1 223322223344 77773 23344444444466666 33 33
Q ss_pred EEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC--CccCcceEEE
Q 017371 150 NFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD--GFYFANGVAL 226 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~--~~~~~~gi~~ 226 (372)
.+... . ..+..+.+.+ +++..++-. .++.|..+|. ++...... .......+++
T Consensus 137 ~~~~~-~----~~v~~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~ 192 (313)
T 3odt_A 137 NLQAH-N----ASVWDAKVVSFSENKFLTAS-----------------ADKTIKLWQN--DKVIKTFSGIHNDVVRHLAV 192 (313)
T ss_dssp EEECC-S----SCEEEEEEEETTTTEEEEEE-----------------TTSCEEEEET--TEEEEEECSSCSSCEEEEEE
T ss_pred ecccC-C----CceeEEEEccCCCCEEEEEE-----------------CCCCEEEEec--CceEEEEeccCcccEEEEEE
Confidence 22211 1 2345666666 666555422 4677888884 33333332 2334467889
Q ss_pred ecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhc
Q 017371 227 SRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAY 306 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~ 306 (372)
++++. ++ +...++.|..+++...+ ....+. ...+....+++.++|.+..+...
T Consensus 193 ~~~~~-~~-~~~~dg~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~~~~~~l~~~~~d---------------------- 245 (313)
T 3odt_A 193 VDDGH-FI-SCSNDGLIKLVDMHTGD--VLRTYE-GHESFVYCIKLLPNGDIVSCGED---------------------- 245 (313)
T ss_dssp EETTE-EE-EEETTSEEEEEETTTCC--EEEEEE-CCSSCEEEEEECTTSCEEEEETT----------------------
T ss_pred cCCCe-EE-EccCCCeEEEEECCchh--hhhhhh-cCCceEEEEEEecCCCEEEEecC----------------------
Confidence 99987 44 44456789889886432 122222 23344677899999976655543
Q ss_pred CccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 307 PKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 307 p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
+.|..+| .+++.+..+..+.+ .++++... ++++..++ ....|..+++
T Consensus 246 -------------g~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~-~dg~i~iw~~ 294 (313)
T 3odt_A 246 -------------RTVRIWSKENGSLKQVITLPAI----SIWSVDCMSNGDIIVGS-SDNLVRIFSQ 294 (313)
T ss_dssp -------------SEEEEECTTTCCEEEEEECSSS----CEEEEEECTTSCEEEEE-TTSCEEEEES
T ss_pred -------------CEEEEEECCCCceeEEEeccCc----eEEEEEEccCCCEEEEe-CCCcEEEEeC
Confidence 6788888 46888888776543 36677775 56665554 4567877775
No 217
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.32 E-value=2.1e-05 Score=73.97 Aligned_cols=175 Identities=13% Similarity=0.108 Sum_probs=99.8
Q ss_pred EcCCCcEEEEecCCeEEEEe-C---CceEEEE--ecCCCcccCeEEcC--CCCEEEEeCCC----cEEEEcCCC--cEEE
Q 017371 86 MDKNGVIYTATRDGWIKRLQ-D---GTWVNWK--FIDSQTLVGLTSTK--EGHLIICDNAN----GLHKVSEDG--VENF 151 (372)
Q Consensus 86 ~d~~G~l~v~~~~g~i~~~~-~---g~~~~~~--~~~~~p~~gl~~d~--dG~l~v~~~~~----gv~~~~~~g--~~~l 151 (372)
.|.+|.||+++..| ++++. + ..++... ....... .|++|+ +++||++.... +|++.+..| .+.+
T Consensus 19 ~d~~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~-~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~ 96 (394)
T 3b7f_A 19 ESGPVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIH-HIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEA 96 (394)
T ss_dssp CCSCCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEE-EEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEEC
T ss_pred CCCCCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceE-EEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceEC
Confidence 56688999999766 77776 3 2455542 2223445 899998 78999997544 688876555 5544
Q ss_pred eee--cCCc-------ccccccceEEcc---CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-
Q 017371 152 LSY--VNGS-------KLRFANDVVEAS---DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF- 218 (372)
Q Consensus 152 ~~~--~~~~-------~~~~~~~l~~d~---dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~- 218 (372)
... .+.. ....+..|++++ .++||+.. ..+.|++.+......+.+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~------------------~~ggl~~S~DgG~tW~~~~~~~~ 158 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGT------------------SPQGLFRSTDHGASWEPVAGFND 158 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEE------------------ETTEEEEESSTTSBCEECHHHHT
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEe------------------cCCcEEEEcCCCCCeEECcCccC
Confidence 321 1111 112344688885 68999953 2467998876545555542110
Q ss_pred ----------------c--CcceEEEec-CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC-----CC------C-CC
Q 017371 219 ----------------Y--FANGVALSR-DEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-----LP------G-AP 267 (372)
Q Consensus 219 ----------------~--~~~gi~~~~-dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~-----~~------g-~p 267 (372)
. .-..|++++ +.+.+|+... ...|++..-.|. .- +.+... ++ + ..
T Consensus 159 ~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~DgG~-tW--~~~~~~~~~~~~p~~~~~~g~~~ 234 (394)
T 3b7f_A 159 HPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFESTDAGT-DW--KPLNRGCAANFLPDPNVEFGHDP 234 (394)
T ss_dssp CTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEESSTTS-SC--EECCTTCCCTTSSSSSSSSCBCE
T ss_pred CccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEECCCCC-Cc--eECCCCccccccCCCccccCcce
Confidence 0 012567776 3455888753 235776643332 11 111111 11 0 13
Q ss_pred ceeEEcCC--CCEEEEEec
Q 017371 268 DNINLAPD--GTFWIAIIK 284 (372)
Q Consensus 268 ~~i~~d~~--G~lwva~~~ 284 (372)
..|+++++ +.+|++...
T Consensus 235 ~~i~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 235 HCVVQHPAAPDILYQQNHC 253 (394)
T ss_dssp EEEEECSSSTTEEEEEETT
T ss_pred eEEEECCCCCCEEEEEcCC
Confidence 45788876 789998754
No 218
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.32 E-value=0.00035 Score=75.15 Aligned_cols=179 Identities=14% Similarity=0.100 Sum_probs=111.8
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCC--CCEEEEeCC-CcEEEEc-CCC--c
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKE--GHLIICDNA-NGLHKVS-EDG--V 148 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~d--G~l~v~~~~-~gv~~~~-~~g--~ 148 (372)
....++++.++|. |.+++.+|.|..|+ +++. ..+....+... .+++.++ +.++++... ..+..++ .++ .
T Consensus 658 ~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 658 DEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVN-CCHFTNKSNHLLLATGSNDFFLKLWDLNQKECR 736 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSCCEEEEEETTSCEEEEETTSSSEE
T ss_pred CCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEE-EEEEecCCCceEEEEEeCCCeEEEEECCCcchh
Confidence 3456789999885 45556899999999 5553 33433334445 8889874 345554433 4477788 555 3
Q ss_pred EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-----------
Q 017371 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG----------- 217 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~----------- 217 (372)
..+. +. ...+..+++.++|+..++-+ .+|.|..+|..+++.......
T Consensus 737 ~~~~----~h-~~~v~~~~~sp~~~~l~s~s-----------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 794 (1249)
T 3sfz_A 737 NTMF----GH-TNSVNHCRFSPDDELLASCS-----------------ADGTLRLWDVRSANERKSINVKRFFLSSEDPP 794 (1249)
T ss_dssp EEEC----CC-SSCEEEEEECSSTTEEEEEE-----------------SSSEEEEEEGGGTEEEEEEECCCCC-------
T ss_pred heec----CC-CCCEEEEEEecCCCEEEEEE-----------------CCCeEEEEeCCCCcccceecccccccccCCcc
Confidence 3321 11 13567889999998777632 467788888766654332211
Q ss_pred ---ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 218 ---FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 218 ---~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
......+++++||+.++++. .+.+..+++.... ....+.....+....+++.++|++.++...
T Consensus 795 ~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 860 (1249)
T 3sfz_A 795 EDVEVIVKCCSWSADGDKIIVAA--KNKVLLFDIHTSG--LLAEIHTGHHSTIQYCDFSPYDHLAVIALS 860 (1249)
T ss_dssp -CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEETTTCC--EEEEEECSSSSCCCEEEECSSTTEEEEECS
T ss_pred ccccceEEEEEECCCCCEEEEEc--CCcEEEEEecCCC--ceeEEcCCCCCceEEEEEcCCCCEEEEEeC
Confidence 11345678999999887775 4578888876532 222222223344677899999988777655
No 219
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.31 E-value=0.00058 Score=67.85 Aligned_cols=182 Identities=13% Similarity=0.098 Sum_probs=108.1
Q ss_pred CCCCCCccEEEcCCCcE-EEEecCCeEEEEe--CCce--E-EEEecCCCcccCeEEcCCCCEEEEeCC-C---c-EEEEc
Q 017371 76 GSVNHPEDASMDKNGVI-YTATRDGWIKRLQ--DGTW--V-NWKFIDSQTLVGLTSTKEGHLIICDNA-N---G-LHKVS 144 (372)
Q Consensus 76 g~~~~p~~i~~d~~G~l-~v~~~~g~i~~~~--~g~~--~-~~~~~~~~p~~gl~~d~dG~l~v~~~~-~---g-v~~~~ 144 (372)
|.-....++++.|+|.+ ..++.+|.|..|+ .++. . .+....+... .+++++||+..++... . + +..++
T Consensus 57 ~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~-~v~fs~dg~~l~~~~~~~~~~~~v~~wd 135 (611)
T 1nr0_A 57 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK-DISWDSESKRIAAVGEGRERFGHVFLFD 135 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEE-EEEECTTSCEEEEEECCSSCSEEEEETT
T ss_pred CCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceE-EEEECCCCCEEEEEECCCCceeEEEEee
Confidence 33345667999999964 4556899999998 3332 2 2222233445 9999999986655332 1 2 33444
Q ss_pred CCC--cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cC
Q 017371 145 EDG--VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YF 220 (372)
Q Consensus 145 ~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~ 220 (372)
.| ...+ .+. ...++.+++.+++. ..++- ..++.|..+|..+++......+. ..
T Consensus 136 -~~~~~~~l----~gh-~~~v~~v~f~p~~~~~l~s~-----------------s~D~~v~lwd~~~~~~~~~l~~H~~~ 192 (611)
T 1nr0_A 136 -TGTSNGNL----TGQ-ARAMNSVDFKPSRPFRIISG-----------------SDDNTVAIFEGPPFKFKSTFGEHTKF 192 (611)
T ss_dssp -TCCBCBCC----CCC-SSCEEEEEECSSSSCEEEEE-----------------ETTSCEEEEETTTBEEEEEECCCSSC
T ss_pred -CCCCccee----cCC-CCCceEEEECCCCCeEEEEE-----------------eCCCeEEEEECCCCeEeeeeccccCc
Confidence 33 2211 121 13567899999986 34442 24677888887766654444432 33
Q ss_pred cceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc------CCCCCCceeEEcCCCCEEEEEec
Q 017371 221 ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE------NLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 221 ~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~------~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
.+.++|+|||+. +++...++.|..++....+. ...+.. ...+....+++.++|.+.++...
T Consensus 193 V~~v~fspdg~~-las~s~D~~i~lwd~~~g~~--~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 193 VHSVRYNPDGSL-FASTGGDGTIVLYNGVDGTK--TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp EEEEEECTTSSE-EEEEETTSCEEEEETTTCCE--EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred eEEEEECCCCCE-EEEEECCCcEEEEECCCCcE--eeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence 467999999984 44555566788787653321 112211 12234567889999987776554
No 220
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.31 E-value=0.00022 Score=64.14 Aligned_cols=180 Identities=16% Similarity=0.112 Sum_probs=97.6
Q ss_pred CCCCCCCccEEEcCCCc-EEEEecCCeEEEEe--CCc----e-EEEEecCCCcccCeEEcC--CCCEEEEeCC-CcEEEE
Q 017371 75 EGSVNHPEDASMDKNGV-IYTATRDGWIKRLQ--DGT----W-VNWKFIDSQTLVGLTSTK--EGHLIICDNA-NGLHKV 143 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~----~-~~~~~~~~~p~~gl~~d~--dG~l~v~~~~-~gv~~~ 143 (372)
.|.-....++++.++|. |.++..+|.|..|+ .+. . ..+....+... .+++.+ +++++++... ..+..+
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIV-AIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEE-EEEECCGGGCSEEEEEETTSCEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEE-EEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 34445677899999885 55666899999998 332 1 22222233445 899987 5776665444 346667
Q ss_pred c-CCC-c-------EEEeeecCCcccccccceEEccC--CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEE
Q 017371 144 S-EDG-V-------ENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 212 (372)
Q Consensus 144 ~-~~g-~-------~~l~~~~~~~~~~~~~~l~~d~d--G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~ 212 (372)
+ ..+ . +.+... .+. ...+..+++.++ +++.++-. .++.|..+|..+++..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~~~l~~~~-----------------~dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTL-NDS-KGSLYSVKFAPAHLGLKLACLG-----------------NDGILRLYDALEPSDL 147 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEE-CCC-SSCEEEEEECCGGGCSEEEEEE-----------------TTCEEEEEECSSTTCT
T ss_pred ecCCCcccccccCcceeeee-ccc-CCceeEEEEcCCCCCcEEEEec-----------------CCCcEEEecCCChHHh
Confidence 6 433 1 222221 111 134668889888 87666522 4678888887654311
Q ss_pred E-------Ee-------CCccCcceEEEecC---CCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCC
Q 017371 213 L-------VA-------DGFYFANGVALSRD---EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD 275 (372)
Q Consensus 213 ~-------~~-------~~~~~~~gi~~~~d---g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~ 275 (372)
. .. ........++++|+ ++.++++.. +..+..++....+......+. ...+....+++.++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL-EQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPS 225 (351)
T ss_dssp TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-TEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCC
T ss_pred ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecC-CCcEEEEccCCCceeeeeecC-CCCcceeEEEECCC
Confidence 0 00 11223456888887 775665554 444433333222111111221 22233556778888
Q ss_pred C
Q 017371 276 G 276 (372)
Q Consensus 276 G 276 (372)
|
T Consensus 226 ~ 226 (351)
T 3f3f_A 226 I 226 (351)
T ss_dssp S
T ss_pred C
Confidence 7
No 221
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=98.31 E-value=7.6e-06 Score=69.61 Aligned_cols=160 Identities=14% Similarity=0.012 Sum_probs=97.3
Q ss_pred ccccCceEecCCCCCCCccEEEcCCCcEEEEecCCeEEEEe--CCc-------eEEEEecCCCcccCeEEcCCCCEEEEe
Q 017371 65 TQLQDFIKVGEGSVNHPEDASMDKNGVIYTATRDGWIKRLQ--DGT-------WVNWKFIDSQTLVGLTSTKEGHLIICD 135 (372)
Q Consensus 65 ~~l~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~-------~~~~~~~~~~p~~gl~~d~dG~l~v~~ 135 (372)
..+..+.++..+.+..-..++++|+|.||.. .+|.+++++ ++. -+.+-..+-.-...+.+|++|.||++.
T Consensus 27 ~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~ 105 (236)
T 1tl2_A 27 NWLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS 105 (236)
T ss_dssp CHHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE
T ss_pred chhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeC
Confidence 3456788888866788999999999999999 889999998 322 122211111112278999999999994
Q ss_pred CCCcEEEEc-C-CC-cEEEee--ecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC-
Q 017371 136 NANGLHKVS-E-DG-VENFLS--YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN- 209 (372)
Q Consensus 136 ~~~gv~~~~-~-~g-~~~l~~--~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~- 209 (372)
...|++++ + ++ ...+.. .+....-.....|.++++|.||..+ .+.+++-.+-++
T Consensus 106 -dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-------------------dg~lyr~~~P~~~ 165 (236)
T 1tl2_A 106 -KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-------------------GQQFYKALPPVSN 165 (236)
T ss_dssp -TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-------------------TTEEEEECCCSST
T ss_pred -CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-------------------CCcEEecCCCCCC
Confidence 34588999 3 33 222111 1111111234689999999999863 345665433211
Q ss_pred ------eEEEEe-CCccCcceEEEecCCCEEEEEeCCCCeEEEEEc
Q 017371 210 ------ITTLVA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYWL 248 (372)
Q Consensus 210 ------~~~~~~-~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~ 248 (372)
..+.+. .+...-.-+.+++++. ||.++ +.++++...
T Consensus 166 ~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g~~Y~~~~ 208 (236)
T 1tl2_A 166 QDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GGKFYEDYP 208 (236)
T ss_dssp TCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TTEEEEESC
T ss_pred CcccccccceeccCCcceEEEEEECCCCc-EEEEe--CCeEEecCC
Confidence 111222 2222222355788886 77666 567887644
No 222
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.31 E-value=0.00069 Score=66.90 Aligned_cols=62 Identities=10% Similarity=0.086 Sum_probs=39.9
Q ss_pred EEEcCCCcEEEEecCCeEEEEe--CCceEEEEecCCC-----cccCeEEcCCCCEEEEeC------CCcEEEEc-CCC
Q 017371 84 ASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ-----TLVGLTSTKEGHLIICDN------ANGLHKVS-EDG 147 (372)
Q Consensus 84 i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~-----p~~gl~~d~dG~l~v~~~------~~gv~~~~-~~g 147 (372)
++++ +|.+|+++.+|.|+.+| +|+...-...... ......+. +|.+|++.. ...|+.+| .+|
T Consensus 111 ~~~~-~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 111 LAYG-AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp CEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTC
T ss_pred cEEE-CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCC
Confidence 4554 67999999999999999 6765432222221 11122233 688988865 24588999 678
No 223
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.28 E-value=0.00045 Score=62.84 Aligned_cols=155 Identities=8% Similarity=0.068 Sum_probs=97.9
Q ss_pred EecCCCCCCCccEEEcCC---C--cEEEEecCCeEEEEe--CCc-eEEEEe-----cCCCcccCeEEcCC----CCEEEE
Q 017371 72 KVGEGSVNHPEDASMDKN---G--VIYTATRDGWIKRLQ--DGT-WVNWKF-----IDSQTLVGLTSTKE----GHLIIC 134 (372)
Q Consensus 72 ~~~~g~~~~p~~i~~d~~---G--~l~v~~~~g~i~~~~--~g~-~~~~~~-----~~~~p~~gl~~d~d----G~l~v~ 134 (372)
.+..+.-....++++.++ + .++++..++.|..|+ .++ ...+.. ..+... .+++.++ |+++++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFY-TCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEE-EEEEEECTTTCCEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEE-EEEeccCCCCCCCEEEE
Confidence 444454456678888863 3 477777788888888 343 333321 113345 8888887 555554
Q ss_pred -eCCCcEEEEc-CCC--cEEEeeecCCcccccccceEEcc-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC
Q 017371 135 -DNANGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN 209 (372)
Q Consensus 135 -~~~~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~ 209 (372)
.....+..++ .++ ...+... ...+..+++.+ ++++.++-. .++.|..+|..++
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~l~s~~-----------------~dg~i~iwd~~~~ 148 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGH-----GNAINELKFHPRDPNLLLSVS-----------------KDHALRLWNIQTD 148 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESC-----CSCEEEEEECSSCTTEEEEEE-----------------TTSCEEEEETTTT
T ss_pred ecCCCEEEEEEchhceEeeeecCC-----CCcEEEEEECCCCCCEEEEEe-----------------CCCeEEEEEeecC
Confidence 4334477777 555 3333211 13567899998 888776532 4678999998877
Q ss_pred eEEEEeC----CccCcceEEEecCCCEEEEEeCCCCeEEEEEccC
Q 017371 210 ITTLVAD----GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 210 ~~~~~~~----~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g 250 (372)
+...... .-.....++++++++.++.+. .++.|..+++..
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 192 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG-MDHSLKLWRINS 192 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEESCS
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEec-CCCCEEEEECCC
Confidence 7665542 223446788999999766665 456788888764
No 224
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.28 E-value=0.0015 Score=59.58 Aligned_cols=181 Identities=9% Similarity=0.040 Sum_probs=103.1
Q ss_pred CCCccEEEcCCCcE-EEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEEeC-CCcEEEEcCCC-cEEEe
Q 017371 79 NHPEDASMDKNGVI-YTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIICDN-ANGLHKVSEDG-VENFL 152 (372)
Q Consensus 79 ~~p~~i~~d~~G~l-~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~~~-~~gv~~~~~~g-~~~l~ 152 (372)
....++++.++|.+ ..+..+|.|..|+ +++. ..+....+... .+++.++|+.+++.. +..+..++-.+ .....
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~ 155 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVY-SVAFSPDNRQILSAGAEREIKLWNILGECKFSS 155 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEE-EEEECSSTTEEEEEETTSCEEEEESSSCEEEEC
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEE-EEEECCCCCEEEEEcCCCEEEEEeccCCceeee
Confidence 34567889988865 4556899999999 5543 33433334455 899999998665543 34477777323 11111
Q ss_pred eecCCcccccccceEEccCC----------cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE-EeCCccCc
Q 017371 153 SYVNGSKLRFANDVVEASDG----------SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFYFA 221 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG----------~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~-~~~~~~~~ 221 (372)
....+ ....+..+++.+++ .++++ +..++.|..+|.. ++... +...-...
T Consensus 156 ~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~l~s-----------------~~~d~~i~iwd~~-~~~~~~~~~h~~~v 216 (343)
T 2xzm_R 156 AEKEN-HSDWVSCVRYSPIMKSANKVQPFAPYFAS-----------------VGWDGRLKVWNTN-FQIRYTFKAHESNV 216 (343)
T ss_dssp CTTTS-CSSCEEEEEECCCCCSCSCCCSSCCEEEE-----------------EETTSEEEEEETT-TEEEEEEECCSSCE
T ss_pred ecccC-CCceeeeeeeccccccccccCCCCCEEEE-----------------EcCCCEEEEEcCC-CceeEEEcCccccc
Confidence 11011 11234566666665 33333 2356788888854 44332 22223345
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~ 283 (372)
+.++++|||++|..+ ..++.|..+++...... ...+. .......+++.++|.+..+..
T Consensus 217 ~~~~~s~~g~~l~sg-s~dg~v~iwd~~~~~~~-~~~~~--~~~~v~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 217 NHLSISPNGKYIATG-GKDKKLLIWDILNLTYP-QREFD--AGSTINQIAFNPKLQWVAVGT 274 (343)
T ss_dssp EEEEECTTSSEEEEE-ETTCEEEEEESSCCSSC-SEEEE--CSSCEEEEEECSSSCEEEEEE
T ss_pred eEEEECCCCCEEEEE-cCCCeEEEEECCCCccc-ceeec--CCCcEEEEEECCCCCEEEEEC
Confidence 678999999965544 45667888887432111 11221 112356788999987655443
No 225
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.28 E-value=7.2e-05 Score=75.59 Aligned_cols=199 Identities=11% Similarity=0.002 Sum_probs=104.5
Q ss_pred CCccEEEcCCCc-EEEEec---------CCeEEEEe--CCceEEEEecCC---CcccCeEEcCCCCEEEEeCCCcEEEEc
Q 017371 80 HPEDASMDKNGV-IYTATR---------DGWIKRLQ--DGTWVNWKFIDS---QTLVGLTSTKEGHLIICDNANGLHKVS 144 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~---------~g~i~~~~--~g~~~~~~~~~~---~p~~gl~~d~dG~l~v~~~~~gv~~~~ 144 (372)
...++++.+||+ |.++.. ++.|+.++ +++.+.+....+ ... .+++.|||+..+......|+.++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIFENNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEETTEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEECCeEEEEE
Confidence 378899999996 555543 27788888 565544433222 245 78899999643333345688898
Q ss_pred -CCC-cEEEeee-cCCc-------------ccccccceEEccCCc-EEEEeCC-CC---CCCc-------cccccc-c--
Q 017371 145 -EDG-VENFLSY-VNGS-------------KLRFANDVVEASDGS-LYFTVSS-SK---YLPH-------EYCLDI-L-- 193 (372)
Q Consensus 145 -~~g-~~~l~~~-~~~~-------------~~~~~~~l~~d~dG~-i~vtd~~-~~---~~~~-------~~~~~~-~-- 193 (372)
.+| ...+... ..+. -+.....+++.|||+ |+++... .. +... .....+ .
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 556 4444322 1110 001225789999996 4444211 00 0000 000000 0
Q ss_pred --cccCCCeEEEEeCCCCeE-EEEeCC------ccCcceEEEecCCCEEEEE-eCC--CCeEEEEEccCCCCcceeeecc
Q 017371 194 --EGKPHGQLLKYDPSSNIT-TLVADG------FYFANGVALSRDEDYVVVC-ESW--KFRCRKYWLKGERKGKLETFAE 261 (372)
Q Consensus 194 --~~~~~g~v~~~d~~t~~~-~~~~~~------~~~~~gi~~~~dg~~l~v~-~~~--~~~i~~~~~~g~~~~~~~~~~~ 261 (372)
.......|+.+|.++++. ..+... ......++|+|||+.++.. +.. ...|+.+++.+.+... ....
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~ 298 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK--KHED 298 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE--EEEE
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE--EEEe
Confidence 001123789999887764 333221 1122458899999866444 322 2457777876543221 1111
Q ss_pred CCCCC----CceeEEcCCCC-EEEE
Q 017371 262 NLPGA----PDNINLAPDGT-FWIA 281 (372)
Q Consensus 262 ~~~g~----p~~i~~d~~G~-lwva 281 (372)
...+. +..+++.+||+ |+++
T Consensus 299 ~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 299 ESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp ECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred ccCCEEeccCCCceEcCCCCeEEEE
Confidence 11122 24788999996 4443
No 226
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.25 E-value=0.00042 Score=69.85 Aligned_cols=183 Identities=14% Similarity=0.140 Sum_probs=110.3
Q ss_pred CCCCCCccEEEcCCC-c-EEEEecCCeEEEEe-C-C-c----e-EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc
Q 017371 76 GSVNHPEDASMDKNG-V-IYTATRDGWIKRLQ-D-G-T----W-VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS 144 (372)
Q Consensus 76 g~~~~p~~i~~d~~G-~-l~v~~~~g~i~~~~-~-g-~----~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~ 144 (372)
+.-....+|++.+++ . |..++.||.|..|+ . + . . ..+........ .+++.++|++.++... ..|..++
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~-~v~~s~~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE-DVVLSSDGQFALSGSWDGELRLWD 458 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEE-EEEECCCCCEEEEEeCCCcEEEEE
Confidence 333456678887654 4 55666899999998 2 1 1 1 12222223345 8999999987766544 4467777
Q ss_pred -CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc---
Q 017371 145 -EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--- 218 (372)
Q Consensus 145 -~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~--- 218 (372)
.++ ...+... ...+..+++.++|+..++-+ .++.|..+|..+.....+....
T Consensus 459 ~~~~~~~~~~~~h-----~~~v~~~~~s~~~~~l~s~s-----------------~D~~i~iwd~~~~~~~~~~~~~~~h 516 (694)
T 3dm0_A 459 LAAGVSTRRFVGH-----TKDVLSVAFSLDNRQIVSAS-----------------RDRTIKLWNTLGECKYTISEGGEGH 516 (694)
T ss_dssp TTTTEEEEEEECC-----SSCEEEEEECTTSSCEEEEE-----------------TTSCEEEECTTSCEEEEECSSTTSC
T ss_pred CCCCcceeEEeCC-----CCCEEEEEEeCCCCEEEEEe-----------------CCCEEEEEECCCCcceeeccCCCCC
Confidence 666 3333211 12466889999998766532 4677888887544333332221
Q ss_pred -cCcceEEEecCCC-EEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 219 -YFANGVALSRDED-YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 219 -~~~~gi~~~~dg~-~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
.....+++++++. .++++.+.++.|..+++...+. ...+ ....+....++++++|++.++...
T Consensus 517 ~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~-~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 517 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTL-AGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEE-CCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEE-cCCCCCEEEEEEeCCCCEEEEEeC
Confidence 1235688998863 3555656677788888765321 1222 223344677899999998777655
No 227
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.23 E-value=0.0001 Score=66.78 Aligned_cols=223 Identities=13% Similarity=0.042 Sum_probs=127.4
Q ss_pred CCCccEEEcCCCc--EEEEecCCeEEEEe---CCceEEEEe--cCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CC--C
Q 017371 79 NHPEDASMDKNGV--IYTATRDGWIKRLQ---DGTWVNWKF--IDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-ED--G 147 (372)
Q Consensus 79 ~~p~~i~~d~~G~--l~v~~~~g~i~~~~---~g~~~~~~~--~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~--g 147 (372)
....++++.++|. |++++.+|.|..|+ .++...+.. ...... .+++.+ ++++++... ..+..++ .+ +
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~-~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGIC-RICKYG-DDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEE-EEEEET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceE-EEEeCC-CCEEEEEcCCCeEEEEccccccc
Confidence 3567788988887 77777899999987 334444333 333445 889988 765555434 4466677 33 1
Q ss_pred -c----EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC-Ce--EEEEeC-Cc
Q 017371 148 -V----ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NI--TTLVAD-GF 218 (372)
Q Consensus 148 -~----~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t-~~--~~~~~~-~~ 218 (372)
. ........ ....+..+++.+++ ++++. ..+.|..+|..+ ++ ...... .-
T Consensus 135 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-l~~~~------------------~d~~i~i~d~~~~~~~~~~~~~~~~~ 193 (342)
T 1yfq_A 135 GVIAVKNLNSNNTK--VKNKIFTMDTNSSR-LIVGM------------------NNSQVQWFRLPLCEDDNGTIEESGLK 193 (342)
T ss_dssp BCEEEEESCSSSSS--SCCCEEEEEECSSE-EEEEE------------------STTEEEEEESSCCTTCCCEEEECSCS
T ss_pred ccccccCCeeeEEe--eCCceEEEEecCCc-EEEEe------------------CCCeEEEEECCccccccceeeecCCC
Confidence 1 00000111 11345678888777 55542 457888898875 32 222222 22
Q ss_pred cCcceEEEec-CCCEEEEEeCCCCeEEEEEccCC--C--CcceeeeccCC--------CCCCceeEEcCCCCEEEEEecC
Q 017371 219 YFANGVALSR-DEDYVVVCESWKFRCRKYWLKGE--R--KGKLETFAENL--------PGAPDNINLAPDGTFWIAIIKL 285 (372)
Q Consensus 219 ~~~~gi~~~~-dg~~l~v~~~~~~~i~~~~~~g~--~--~~~~~~~~~~~--------~g~p~~i~~d~~G~lwva~~~~ 285 (372)
.....+++++ +++.++++. .++.|..++.+.. . ......+.... .+....+++.++|++.++...
T Consensus 194 ~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~- 271 (342)
T 1yfq_A 194 YQIRDVALLPKEQEGYACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS- 271 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET-
T ss_pred CceeEEEECCCCCCEEEEEe-cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC-
Confidence 3456789999 998666655 4667777666543 1 11122222111 123567889999976555544
Q ss_pred chhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECC-CCCeeccceeeEEECCEEEEEeCCC
Q 017371 286 DARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDP-TGQLMSFVTSGLQVDNHLYVISLTS 363 (372)
Q Consensus 286 ~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~-~g~~~~~~t~~~~~~g~L~igs~~~ 363 (372)
.+.|..+|. +++.+..+... .+ .++++..++..|..++..+
T Consensus 272 ---------------------------------dg~i~vwd~~~~~~~~~~~~~h~~----~v~~~~~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 272 ---------------------------------DGIISCWNLQTRKKIKNFAKFNED----SVVKIACSDNILCLATSDD 314 (342)
T ss_dssp ---------------------------------TSCEEEEETTTTEEEEECCCCSSS----EEEEEEECSSEEEEEEECT
T ss_pred ---------------------------------CceEEEEcCccHhHhhhhhcccCC----CceEecCCCCeEEEEecCC
Confidence 356777774 47776665543 32 3555553445666666543
No 228
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.23 E-value=0.0006 Score=64.19 Aligned_cols=185 Identities=9% Similarity=0.071 Sum_probs=104.2
Q ss_pred CCccEEEcCCCc-EEEEecCCeEEEEe--CCc------------eEEEEecC------------CCcccCeEEcCCC--C
Q 017371 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGT------------WVNWKFID------------SQTLVGLTSTKEG--H 130 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~------------~~~~~~~~------------~~p~~gl~~d~dG--~ 130 (372)
...+++++++|. |.+|+.+|.|..|+ +++ ...+.... +... .+++.+++ .
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~-~l~~~~~~~~~ 108 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN-KIRWLPQKNAA 108 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCC-EEEECCCCSSS
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceE-EEEEcCCCCcc
Confidence 456788999885 55566899999998 333 22232221 3345 89999987 4
Q ss_pred EEEE-eCCCcEEEEc-CCC-cEEE------------------------------------eeecCCcccccccceEEccC
Q 017371 131 LIIC-DNANGLHKVS-EDG-VENF------------------------------------LSYVNGSKLRFANDVVEASD 171 (372)
Q Consensus 131 l~v~-~~~~gv~~~~-~~g-~~~l------------------------------------~~~~~~~~~~~~~~l~~d~d 171 (372)
++++ ..+..+..++ .++ .... ...........+..+++.++
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 5544 4334466666 332 1100 00000111234668899999
Q ss_pred CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe-EEEEe--------CCccCcceEEEecCC-CEEEEEeCCCC
Q 017371 172 GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-TTLVA--------DGFYFANGVALSRDE-DYVVVCESWKF 241 (372)
Q Consensus 172 G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~-~~~~~--------~~~~~~~gi~~~~dg-~~l~v~~~~~~ 241 (372)
|+++++ + .++.|..+|..++. ...+. ..-.....++++|++ + ++++.+.++
T Consensus 189 ~~~l~s-----------------~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg 249 (447)
T 3dw8_B 189 YETYLS-----------------A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN-TFVYSSSKG 249 (447)
T ss_dssp SSEEEE-----------------E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT-EEEEEETTS
T ss_pred CCEEEE-----------------e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc-EEEEEeCCC
Confidence 987775 2 36788888886322 22111 111224578999998 6 445555567
Q ss_pred eEEEEEccCCCCcc--eeeeccCCC-----------CCCceeEEcCCCCEEEEEec
Q 017371 242 RCRKYWLKGERKGK--LETFAENLP-----------GAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 242 ~i~~~~~~g~~~~~--~~~~~~~~~-----------g~p~~i~~d~~G~lwva~~~ 284 (372)
.|..+++...+... ...+..... +....++++++|++.++...
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 78888886543211 223321111 13567889999987776543
No 229
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.23 E-value=0.00084 Score=66.27 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=29.7
Q ss_pred ceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCC
Q 017371 319 GAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 363 (372)
Q Consensus 319 ~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~ 363 (372)
.+.++.+| .+|+++..+..+.+. ...+ .+...+|++|+++..+
T Consensus 484 dg~l~a~D~~tG~~lw~~~~~~~~-~~~p-~~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 484 DGYLKALDNKDGKELWNFKMPSGG-IGSP-MTYSFKGKQYIGSMYG 527 (571)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCC-CSCC-EEEEETTEEEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEEeCCCCc-Eeee-EEEEECCEEEEEEECC
Confidence 46899999 569999999876543 1111 1223689999998654
No 230
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.22 E-value=7.5e-05 Score=74.75 Aligned_cols=196 Identities=15% Similarity=0.063 Sum_probs=106.5
Q ss_pred CCccEEEcCCCcEEEEe--c-CC--eEEEEe-CCceEEEEecCCCccc---------CeEEc--CCCC--EEEEeC-CCc
Q 017371 80 HPEDASMDKNGVIYTAT--R-DG--WIKRLQ-DGTWVNWKFIDSQTLV---------GLTST--KEGH--LIICDN-ANG 139 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~--~-~g--~i~~~~-~g~~~~~~~~~~~p~~---------gl~~d--~dG~--l~v~~~-~~g 139 (372)
...++++++++..|+.. . ++ .|+... +++.+.+.... .... ..++. |||+ |+++.. ...
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~ 103 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQR 103 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCC
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCC-ccccccccccCCccceeeeecCCCeEEEEEECCCCe
Confidence 45566677665555554 1 33 344434 55544432211 1110 23333 8885 444433 246
Q ss_pred EEEEcCC----C-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCC-----
Q 017371 140 LHKVSED----G-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----- 208 (372)
Q Consensus 140 v~~~~~~----g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t----- 208 (372)
|+.++.+ + ...+.............++++.+||+ |+++..... ..........|+++|.++
T Consensus 104 l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 104 LYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFT--------GEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEEC--------SSSTTCEEEEEEEEETTSTTTTC
T ss_pred EEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEeccc--------CCCCCCceeEEEEEECCCCcccc
Confidence 8888843 6 55443211000112456789999996 544321100 000012235799999987
Q ss_pred -CeEEEEe-CCccCcceEEEecCCCEEEEEeCCC-------CeEEEEEccC-CCCcceeeeccCCCCCCceeEEcCCCCE
Q 017371 209 -NITTLVA-DGFYFANGVALSRDEDYVVVCESWK-------FRCRKYWLKG-ERKGKLETFAENLPGAPDNINLAPDGTF 278 (372)
Q Consensus 209 -~~~~~~~-~~~~~~~gi~~~~dg~~l~v~~~~~-------~~i~~~~~~g-~~~~~~~~~~~~~~g~p~~i~~d~~G~l 278 (372)
++.+.+. .+......++++|||++|+++.... ..|+.+++++ .+......+.....+....+...+||++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 6776665 4445566789999999998776432 4799999873 3222333333222334567888999997
Q ss_pred EEEEec
Q 017371 279 WIAIIK 284 (372)
Q Consensus 279 wva~~~ 284 (372)
++....
T Consensus 256 ~~~~~~ 261 (662)
T 3azo_A 256 IVATDR 261 (662)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 766543
No 231
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.22 E-value=3.4e-05 Score=76.14 Aligned_cols=170 Identities=15% Similarity=0.080 Sum_probs=102.1
Q ss_pred CccEEEcCCC--cEEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEe-CC----CcEEEEc-CCC-cE
Q 017371 81 PEDASMDKNG--VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICD-NA----NGLHKVS-EDG-VE 149 (372)
Q Consensus 81 p~~i~~d~~G--~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~-~~----~gv~~~~-~~g-~~ 149 (372)
....++.++| .+|++...+.+..++ +|+.+.+..... . .++++|||+.++.. .. ..|+.++ .+| .+
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~-~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--F-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--C-EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--c-eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3344555555 466665556666777 676666544333 5 88999999866632 22 2488888 666 66
Q ss_pred EEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc-cCcceEE---
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-YFANGVA--- 225 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-~~~~gi~--- 225 (372)
.+... . .....+++.|||+..++.. ......|+++|.++++.+ +..+. .....++
T Consensus 189 ~l~~~-~----~~~~~~~~SpDG~~l~~~~---------------~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 189 VFDSG-E----GSFSSASISPGMKVTAGLE---------------TAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp EECCS-S----CEEEEEEECTTSCEEEEEE---------------CSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred EeecC-C----CccccceECCCCCEEEEcc---------------CCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 55321 1 2346789999997554321 112238999999988877 44432 2233455
Q ss_pred -----EecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 226 -----LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 226 -----~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
|+||| .++++...++.+..+.+ |. ... ...+....++++ +|.+++....
T Consensus 248 ~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~----~~~---~~~~~v~~~~~s-dg~~l~~~s~ 301 (582)
T 3o4h_A 248 ITWLGYLPDG-RLAVVARREGRSAVFID-GE----RVE---APQGNHGRVVLW-RGKLVTSHTS 301 (582)
T ss_dssp EEEEEECTTS-CEEEEEEETTEEEEEET-TE----EEC---CCSSEEEEEEEE-TTEEEEEEEE
T ss_pred ccceeEcCCC-cEEEEEEcCCcEEEEEE-CC----eec---cCCCceEEEEec-CCEEEEEEcC
Confidence 99999 57776666667777776 32 111 122334567788 8877665443
No 232
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.21 E-value=0.001 Score=62.69 Aligned_cols=244 Identities=9% Similarity=0.071 Sum_probs=136.0
Q ss_pred EecCCCCCCCccEEEcC-CCc-EEEEecCCeEEEEe--C---Cc----eEEEEecCCCcccCeEEcCCCCEEEEeCCCc-
Q 017371 72 KVGEGSVNHPEDASMDK-NGV-IYTATRDGWIKRLQ--D---GT----WVNWKFIDSQTLVGLTSTKEGHLIICDNANG- 139 (372)
Q Consensus 72 ~~~~g~~~~p~~i~~d~-~G~-l~v~~~~g~i~~~~--~---g~----~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~g- 139 (372)
.+..+.-....++++.+ +|. |..+..+|.|..|+ . +. ...+ ...+... .+++.++++++++....|
T Consensus 57 ~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~-~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVT-QITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEE-EEEECTTSSEEEEEETTSE
T ss_pred eeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEE-EEEEeCCCCEEEEEeCCCE
Confidence 44344345677899999 885 55566899999998 3 32 1122 2233455 999999998666544433
Q ss_pred EEEEc-C---CC--cEEEeee----cCCc---ccccccceE--EccCCcEEEEeCCCCCCCcccccccccccCCCeEEEE
Q 017371 140 LHKVS-E---DG--VENFLSY----VNGS---KLRFANDVV--EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 204 (372)
Q Consensus 140 v~~~~-~---~g--~~~l~~~----~~~~---~~~~~~~l~--~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~ 204 (372)
+..++ . ++ ...+... .... ....+..+. ..+++.+.++ +..++.|..+
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~d~~i~iw 197 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA-----------------LTNLSRVIIF 197 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE-----------------EETTSEEEEE
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE-----------------EeCCCeEEEE
Confidence 55555 2 34 2211100 0000 001122222 3356665554 2356889999
Q ss_pred eCCCCeEEEEeCC---ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeE----EcCCCC
Q 017371 205 DPSSNITTLVADG---FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNIN----LAPDGT 277 (372)
Q Consensus 205 d~~t~~~~~~~~~---~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~----~d~~G~ 277 (372)
|..+++....... ......++++|+++.++.+. .++.|..+++...+ ....+..........++ +.++|.
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~s~~~~ 274 (437)
T 3gre_A 198 DIRTLERLQIIENSPRHGAVSSICIDEECCVLILGT-TRGIIDIWDIRFNV--LIRSWSFGDHAPITHVEVCQFYGKNSV 274 (437)
T ss_dssp ETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEE-TTSCEEEEETTTTE--EEEEEBCTTCEEEEEEEECTTTCTTEE
T ss_pred eCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEc-CCCeEEEEEcCCcc--EEEEEecCCCCceEEEEeccccCCCcc
Confidence 9887776554433 23456789999998666554 45678888876421 11122101111123453 335565
Q ss_pred EEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCC---------------
Q 017371 278 FWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQ--------------- 341 (372)
Q Consensus 278 lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~--------------- 341 (372)
+.++... .+.|..+|. +++.+..+....+.
T Consensus 275 ~l~s~~~----------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 320 (437)
T 3gre_A 275 IVVGGSS----------------------------------KTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEE 320 (437)
T ss_dssp EEEEEST----------------------------------TEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGG
T ss_pred EEEEEcC----------------------------------CCcEEEEEcCCCcEEEEEEcCCCCCccceeccccccccc
Confidence 5555544 456777774 47777776543211
Q ss_pred -------eeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 342 -------LMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 342 -------~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
....++++...++++.+..-....|.++++
T Consensus 321 ~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 321 LNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp CCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEET
T ss_pred ceecccccCCceEEEEECCceEEEecCCCCeEEEEEC
Confidence 123467777777766666666678888775
No 233
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.20 E-value=0.00017 Score=76.35 Aligned_cols=142 Identities=11% Similarity=0.064 Sum_probs=86.5
Q ss_pred cEEEcCCC-cEEEEecCCeEE-EEe--CCceEEEEecCCCcccCeEEcCCCCEE-EEeCCCcEEEEc-CCC-cEEEeeec
Q 017371 83 DASMDKNG-VIYTATRDGWIK-RLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLI-ICDNANGLHKVS-EDG-VENFLSYV 155 (372)
Q Consensus 83 ~i~~d~~G-~l~v~~~~g~i~-~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~-v~~~~~gv~~~~-~~g-~~~l~~~~ 155 (372)
++++. +| .|+++..++.|+ .++ .++.+.+......+. .+++.|||+.+ ++.....++.++ .+| ...+....
T Consensus 342 ~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~-~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~ 419 (1045)
T 1k32_A 342 RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVF-AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 419 (1045)
T ss_dssp EECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred eeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCcccee-eeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC
Confidence 45555 55 455555566788 777 445444432224456 89999999754 444445688888 667 54443221
Q ss_pred CCcccccccceEEccCCcEEEEeCC-CCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEE
Q 017371 156 NGSKLRFANDVVEASDGSLYFTVSS-SKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVV 234 (372)
Q Consensus 156 ~~~~~~~~~~l~~d~dG~i~vtd~~-~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~ 234 (372)
. ..+..+++.+||+..++... ..+. ......+.|+.+|.++++...+.........++|++||++++
T Consensus 420 ~----~~v~~~~~SpDG~~la~~~~~~~~~--------~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 420 E----AMITDFTISDNSRFIAYGFPLKHGE--------TDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp S----SCCCCEEECTTSCEEEEEEEECSST--------TCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEE
T ss_pred C----CCccceEECCCCCeEEEEecCcccc--------ccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEE
Confidence 1 23468899999974443211 0000 001123579999998888665554445556789999999998
Q ss_pred EEeC
Q 017371 235 VCES 238 (372)
Q Consensus 235 v~~~ 238 (372)
+...
T Consensus 488 ~~s~ 491 (1045)
T 1k32_A 488 YLSY 491 (1045)
T ss_dssp EEES
T ss_pred EEec
Confidence 8764
No 234
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.19 E-value=0.00016 Score=66.25 Aligned_cols=132 Identities=14% Similarity=0.164 Sum_probs=84.3
Q ss_pred eEEEEeCCCCeEEEEe-------CCccCcceEEE--ecCCC--EEEEEeCCCCeEEEEEccCCC---Ccc--eeeeccCC
Q 017371 200 QLLKYDPSSNITTLVA-------DGFYFANGVAL--SRDED--YVVVCESWKFRCRKYWLKGER---KGK--LETFAENL 263 (372)
Q Consensus 200 ~v~~~d~~t~~~~~~~-------~~~~~~~gi~~--~~dg~--~l~v~~~~~~~i~~~~~~g~~---~~~--~~~~~~~~ 263 (372)
++|.+|+++++++.+. ..+..|.|+|+ +++++ ++|+++.. .++..|.+.... ... ...| .+
T Consensus 102 ~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f--~l 178 (355)
T 3amr_A 102 EIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAF--KM 178 (355)
T ss_dssp EEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEE--EC
T ss_pred EEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEe--cC
Confidence 3455688888777662 44578999999 66443 56766654 688888774221 111 1222 25
Q ss_pred CCCCceeEEcC-CCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC------CcEEEEEE
Q 017371 264 PGAPDNINLAP-DGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED------GTIIRNLV 336 (372)
Q Consensus 264 ~g~p~~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~------g~~~~~~~ 336 (372)
++.|.++.+|+ .|.||++... .+|.+|+.+ ++++..+.
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd-----------------------------------~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEED-----------------------------------EAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETT-----------------------------------TEEEEEECSTTSCSCCEEEEEBS
T ss_pred CCCcceEEEcCCCCeEEEeccc-----------------------------------ceEEEEeCCcCCCCCceEEEEec
Confidence 56789999985 5799999976 258999844 33444332
Q ss_pred CCCCCeeccceeeEEE-C----CEEEEEeCCCCeEEEEeC
Q 017371 337 DPTGQLMSFVTSGLQV-D----NHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 337 ~~~g~~~~~~t~~~~~-~----g~L~igs~~~~~i~~~~~ 371 (372)
.+.....+..+... . ++|++.+-.++.+.+++.
T Consensus 224 --~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 224 --GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp --SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEES
T ss_pred --CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEEC
Confidence 23323356666553 2 478888888888888875
No 235
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.16 E-value=0.00028 Score=64.12 Aligned_cols=186 Identities=13% Similarity=-0.011 Sum_probs=100.4
Q ss_pred CCCCCCCccEEEcCCCc-EEEEe-c---CCeEEEEe--CCceEEEE--ecCCCcccCeEEcCC---CC-EEEEeCCCcEE
Q 017371 75 EGSVNHPEDASMDKNGV-IYTAT-R---DGWIKRLQ--DGTWVNWK--FIDSQTLVGLTSTKE---GH-LIICDNANGLH 141 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G~-l~v~~-~---~g~i~~~~--~g~~~~~~--~~~~~p~~gl~~d~d---G~-l~v~~~~~gv~ 141 (372)
.+.-....++++.++|. +.++. . +|.|..|+ +++..... ....... .+++.++ |+ |+.+.....+.
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIK-CGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEE-EEECTTCCTTTCCEEEEETTSCEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEE-EEEEcCCCCCCceEEEecCCCeEE
Confidence 33334677899999884 44333 3 88899998 55543221 2223345 8899987 55 44444444577
Q ss_pred EEc-CCC---cEEEeeecCC--cccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe-EEEE
Q 017371 142 KVS-EDG---VENFLSYVNG--SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-TTLV 214 (372)
Q Consensus 142 ~~~-~~g---~~~l~~~~~~--~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~-~~~~ 214 (372)
.++ .++ ...+... .+ ....+..++++.++|+..++-. .++.|..+|..+++ ....
T Consensus 94 iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~s~~~~~l~~~~-----------------~d~~i~vwd~~~~~~~~~~ 155 (357)
T 3i2n_A 94 IWNLEAPEMPVYSVKGH-KEIINAIDGIGGLGIGEGAPEIVTGS-----------------RDGTVKVWDPRQKDDPVAN 155 (357)
T ss_dssp EECTTSCSSCSEEECCC-SSCEEEEEEESGGGCC-CCCEEEEEE-----------------TTSCEEEECTTSCSSCSEE
T ss_pred EEeCCCCCccEEEEEec-ccceEEEeeccccccCCCccEEEEEe-----------------CCCeEEEEeCCCCCCccee
Confidence 777 433 2322211 11 0111122235567887666532 46778888877654 2222
Q ss_pred eCCcc-----CcceEE----EecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcC---CCCEEEEE
Q 017371 215 ADGFY-----FANGVA----LSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAP---DGTFWIAI 282 (372)
Q Consensus 215 ~~~~~-----~~~gi~----~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~---~G~lwva~ 282 (372)
..... ....++ ++++++.++.+. .++.|..+++...+. ... .........+++++ +|++.++.
T Consensus 156 ~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~---~~~-~~~~~~v~~~~~~~~~~~~~~l~~~ 230 (357)
T 3i2n_A 156 MEPVQGENKRDCWTVAFGNAYNQEERVVCAGY-DNGDIKLFDLRNMAL---RWE-TNIKNGVCSLEFDRKDISMNKLVAT 230 (357)
T ss_dssp ECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE-TTSEEEEEETTTTEE---EEE-EECSSCEEEEEESCSSSSCCEEEEE
T ss_pred ccccCCCCCCceEEEEEEeccCCCCCEEEEEc-cCCeEEEEECccCce---eee-cCCCCceEEEEcCCCCCCCCEEEEE
Confidence 21111 222344 678998666554 456898898865432 111 12333467788888 78766655
Q ss_pred ec
Q 017371 283 IK 284 (372)
Q Consensus 283 ~~ 284 (372)
..
T Consensus 231 ~~ 232 (357)
T 3i2n_A 231 SL 232 (357)
T ss_dssp ES
T ss_pred CC
Confidence 44
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.15 E-value=0.0015 Score=65.89 Aligned_cols=40 Identities=20% Similarity=0.258 Sum_probs=28.1
Q ss_pred ceEEEEEC-CCCcEEEEEECCCCCeeccceeeE-EECCEEEEEeC
Q 017371 319 GAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGL-QVDNHLYVISL 361 (372)
Q Consensus 319 ~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~-~~~g~L~igs~ 361 (372)
.+.+..+| .+|+++..+..+.+.. .+-+. +.+|+.|++..
T Consensus 497 dg~l~a~D~~tG~~lw~~~~~~~~~---~~p~~y~~~G~~~v~~~ 538 (677)
T 1kb0_A 497 DGRLVAYHAATGEKLWEAPTGTGVV---AAPSTYMVDGRQYVSVA 538 (677)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCC---SCCEEEEETTEEEEEEE
T ss_pred CCcEEEEECCCCceeeeeeCCCCcc---cCCEEEEeCCEEEEEEe
Confidence 47899999 4699999998876542 12223 36888888763
No 237
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.15 E-value=5.9e-05 Score=70.40 Aligned_cols=183 Identities=10% Similarity=0.087 Sum_probs=104.5
Q ss_pred CCccEEEcCCCc--EEEE----------ecCCeEEEEe--CCce---EEEEecCCCcccCeEEcCCCCEEEEe-CCCcEE
Q 017371 80 HPEDASMDKNGV--IYTA----------TRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKEGHLIICD-NANGLH 141 (372)
Q Consensus 80 ~p~~i~~d~~G~--l~v~----------~~~g~i~~~~--~g~~---~~~~~~~~~p~~gl~~d~dG~l~v~~-~~~gv~ 141 (372)
...++++.++|. ++++ ..+|.|..|+ .++. ........... .+++.++|+++++. ....+.
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFN-DLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEE-EEEECSSSSCEEEEESSSCEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceE-EEEECCCCCeEEEEccCCeEE
Confidence 455677778774 4455 4567788888 3321 11111223445 89999999755554 334577
Q ss_pred EEc-CC---CcEEEeeecCCcccccccceEEccC-CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe------
Q 017371 142 KVS-ED---GVENFLSYVNGSKLRFANDVVEASD-GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI------ 210 (372)
Q Consensus 142 ~~~-~~---g~~~l~~~~~~~~~~~~~~l~~d~d-G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~------ 210 (372)
.++ .. +...+.. ..+. ...+..+++.++ ++++++-. .++.|..+|..+++
T Consensus 93 vw~~~~~~~~~~~~~~-~~~h-~~~v~~~~~~~~~~~~l~s~~-----------------~dg~v~iwd~~~~~~~~~~~ 153 (416)
T 2pm9_A 93 LYSTNEANNAINSMAR-FSNH-SSSVKTVKFNAKQDNVLASGG-----------------NNGEIFIWDMNKCTESPSNY 153 (416)
T ss_dssp EECCSSTTSCCCEEEE-CCCS-SSCCCEEEECSSSTTBEEEEC-----------------SSSCEEBCBTTTTSSCTTTC
T ss_pred Eeecccccccccchhh-ccCC-ccceEEEEEcCCCCCEEEEEc-----------------CCCeEEEEECCCCccccccc
Confidence 777 44 2212211 1111 135678999998 77666532 46778888887654
Q ss_pred EEEEe----CCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCC-----CCCCceeEEcCCC-CEEE
Q 017371 211 TTLVA----DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL-----PGAPDNINLAPDG-TFWI 280 (372)
Q Consensus 211 ~~~~~----~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~-----~g~p~~i~~d~~G-~lwv 280 (372)
..... ........+++++++..++++...+..|..+++...+ ....+.... ......+++.++| ++.+
T Consensus 154 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 231 (416)
T 2pm9_A 154 TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKK--EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVA 231 (416)
T ss_dssp CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTE--EEEEECCCCCSSCCCCCEEEEEECSSCTTEEE
T ss_pred cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCC--cceEEeccccccccCCceEEEEECCCCCCEEE
Confidence 21111 1123346799999944466666667789989886532 111221111 3346678899998 4555
Q ss_pred EEec
Q 017371 281 AIIK 284 (372)
Q Consensus 281 a~~~ 284 (372)
+...
T Consensus 232 ~~~~ 235 (416)
T 2pm9_A 232 TATG 235 (416)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 5443
No 238
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.00015 Score=74.13 Aligned_cols=185 Identities=14% Similarity=0.103 Sum_probs=106.8
Q ss_pred CCCccEEEcCCC-cEEEEecCCeEEEEe--CCceEEEE---ecCCCcccCeEEcCC--CCEEEEeCC-CcEEEEc-CCC-
Q 017371 79 NHPEDASMDKNG-VIYTATRDGWIKRLQ--DGTWVNWK---FIDSQTLVGLTSTKE--GHLIICDNA-NGLHKVS-EDG- 147 (372)
Q Consensus 79 ~~p~~i~~d~~G-~l~v~~~~g~i~~~~--~g~~~~~~---~~~~~p~~gl~~d~d--G~l~v~~~~-~gv~~~~-~~g- 147 (372)
....++++.++| .|.+++.+|.|..|+ ++...... ...+... ++++.++ |+++++... ..|..++ .++
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~-~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEE-EEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceE-EEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 355677888877 466677899999998 33333222 1223345 8899876 776655444 3477777 555
Q ss_pred cEEEeeecCCcccccccceEEccC--CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe---EEEEeCCccCcc
Q 017371 148 VENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFAN 222 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~d--G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~---~~~~~~~~~~~~ 222 (372)
....... .+. ...+..+++.++ |+++++- ..+|.|..+|..++. ...+........
T Consensus 89 ~~~~~~~-~~h-~~~V~~v~~sp~~~~~~l~sg-----------------s~dg~I~vwdl~~~~~~~~~~~~~~~~~v~ 149 (753)
T 3jro_A 89 WSQIAVH-AVH-SASVNSVQWAPHEYGPLLLVA-----------------SSDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (753)
T ss_dssp EEEEEEE-CCC-SSCEEEEEECCGGGCSEEEEE-----------------ETTSEEEEEECCSSSCCCCEEEECCSSCEE
T ss_pred ccccccc-cCC-CCCeEEEEECCCCCCCEEEEE-----------------eCCCcEEEEEeecCCCcceeEeecCCCceE
Confidence 3332221 111 135678889888 8776653 256788888876552 222222223345
Q ss_pred eEEEec-------------CCCEEEEEeCCCCeEEEEEccCCCCc-ceeeeccCCCCCCceeEEcCC---CCEEEEEec
Q 017371 223 GVALSR-------------DEDYVVVCESWKFRCRKYWLKGERKG-KLETFAENLPGAPDNINLAPD---GTFWIAIIK 284 (372)
Q Consensus 223 gi~~~~-------------dg~~l~v~~~~~~~i~~~~~~g~~~~-~~~~~~~~~~g~p~~i~~d~~---G~lwva~~~ 284 (372)
.++++| +++.++.+ ..++.|..+++...... ..........+....+++.++ |++.++...
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sg-s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~ 227 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ 227 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES
T ss_pred EEEecCcccccccccccCCCCCEEEEE-ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec
Confidence 678888 47655554 45667888887653211 111111123334567888888 766665544
No 239
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.13 E-value=0.0043 Score=55.70 Aligned_cols=181 Identities=11% Similarity=0.107 Sum_probs=102.3
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCceEE-EEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEcCCC-cEEEe
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVSEDG-VENFL 152 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~-~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~~~g-~~~l~ 152 (372)
....++++.++|. |+.+..+|.|..++ .+.... ......... ...+.++++.+++... ..+..++..+ .....
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~ 165 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVL-SVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV 165 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCcee-EEEEeecCccceeecCCCeEEEEEeCCCceEEE
Confidence 4567889999886 55566899998888 333222 222223334 6667777765555433 4466666333 22111
Q ss_pred eecCCcccccccceEEccCC--cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCcc-CcceEEEecC
Q 017371 153 SYVNGSKLRFANDVVEASDG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY-FANGVALSRD 229 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG--~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~-~~~gi~~~~d 229 (372)
. ..+. ...+..+++.+++ .+.++- ..++.|..+|..+++......+.. ..+.++++||
T Consensus 166 ~-~~~~-~~~v~~~~~~~~~~~~~~~s~-----------------~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~ 226 (340)
T 4aow_A 166 Q-DESH-SEWVSCVRFSPNSSNPIIVSC-----------------GWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD 226 (340)
T ss_dssp C-SSSC-SSCEEEEEECSCSSSCEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred E-eccc-cCcccceEEccCCCCcEEEEE-----------------cCCCEEEEEECCCCceeeEecCCCCcEEEEEECCC
Confidence 1 1111 1233455555543 444442 245678888888777665554433 2357899999
Q ss_pred CCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 230 EDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 230 g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
++.++.+ ..++.|..+++...+ ....+. .......+.+.+++.+.++...
T Consensus 227 ~~~l~s~-s~Dg~i~iwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~~d 276 (340)
T 4aow_A 227 GSLCASG-GKDGQAMLWDLNEGK--HLYTLD--GGDIINALCFSPNRYWLCAATG 276 (340)
T ss_dssp SSEEEEE-ETTCEEEEEETTTTE--EEEEEE--CSSCEEEEEECSSSSEEEEEET
T ss_pred CCEEEEE-eCCCeEEEEEeccCc--eeeeec--CCceEEeeecCCCCceeeccCC
Confidence 9965554 456678888876432 112221 1223456778888877766654
No 240
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.13 E-value=0.00062 Score=69.29 Aligned_cols=251 Identities=14% Similarity=0.061 Sum_probs=126.0
Q ss_pred cEEEcCCCc-EEEEecC---------CeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC-c
Q 017371 83 DASMDKNGV-IYTATRD---------GWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-V 148 (372)
Q Consensus 83 ~i~~d~~G~-l~v~~~~---------g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g-~ 148 (372)
++++.+||. |.++..+ +.++.++ +|+.+.+....+... ..++.|||+..+......|+.++ .+| .
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQ-WVTWSPVGHKLAYVWNNDIYVKIEPNLPS 144 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEE-EEEECSSTTCEEEEETTEEEEESSTTSCC
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcce-eeEECCCCCEEEEEECCeEEEEECCCCce
Confidence 377899995 5555432 5667788 555544332233345 77899999633322345688888 555 4
Q ss_pred EEEeee-cCCcc-------------cccccceEEccCCc-EEEEeC-CCCCCCccccc--------------cc---ccc
Q 017371 149 ENFLSY-VNGSK-------------LRFANDVVEASDGS-LYFTVS-SSKYLPHEYCL--------------DI---LEG 195 (372)
Q Consensus 149 ~~l~~~-~~~~~-------------~~~~~~l~~d~dG~-i~vtd~-~~~~~~~~~~~--------------~~---~~~ 195 (372)
..+... ..... +.....+++.|||+ |.++.. .+ ....+.. .+ ..+
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~--~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT--EVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT--TCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEccc--CCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 433221 00000 12224588999996 444311 11 0000000 00 011
Q ss_pred --cCCCeEEEEeCCC---C---eEEEEeC------CccCcceEEEecCCCEEEE-EeCCC--CeEEEEEccCCC----Cc
Q 017371 196 --KPHGQLLKYDPSS---N---ITTLVAD------GFYFANGVALSRDEDYVVV-CESWK--FRCRKYWLKGER----KG 254 (372)
Q Consensus 196 --~~~g~v~~~d~~t---~---~~~~~~~------~~~~~~gi~~~~dg~~l~v-~~~~~--~~i~~~~~~g~~----~~ 254 (372)
.+...|+.+|.++ + +...+.. .......++|+|||+.+++ ..... ..|+.+++++.+ ..
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~ 302 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL 302 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee
Confidence 1223688999987 6 4444432 1222346789999984443 33222 258888877643 11
Q ss_pred cee-eeccCCCCC-----CceeEEcCCCCEEE-EEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC
Q 017371 255 KLE-TFAENLPGA-----PDNINLAPDGTFWI-AIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE 327 (372)
Q Consensus 255 ~~~-~~~~~~~g~-----p~~i~~d~~G~lwv-a~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~ 327 (372)
... ...+...+. +....+.+||..++ .... ......|+.++.
T Consensus 303 ~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~-------------------------------~~G~~~l~~~~~ 351 (740)
T 4a5s_A 303 VARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN-------------------------------EEGYRHICYFQI 351 (740)
T ss_dssp GGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEEC-------------------------------TTSCEEEEEEET
T ss_pred EEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEc-------------------------------CCCceEEEEEEC
Confidence 111 111112222 34678899997332 2211 111457888887
Q ss_pred CCcEEEEEECCCCCeeccceee-EEECCEEEEEeCC------CCeEEEEeC
Q 017371 328 DGTIIRNLVDPTGQLMSFVTSG-LQVDNHLYVISLT------SNFIGKVQL 371 (372)
Q Consensus 328 ~g~~~~~~~~~~g~~~~~~t~~-~~~~g~L~igs~~------~~~i~~~~~ 371 (372)
+|.....+.. |. .. +..+ ..+++.||+.+.. ...|.++++
T Consensus 352 ~~~~~~~lT~--g~-~~-v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 352 DKKDCTFITK--GT-WE-VIGIEALTSDYLYYISNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp TCSSCEESCC--SS-SC-EEEEEEECSSEEEEEESCGGGCTTCBEEEEEET
T ss_pred CCCceEeccc--CC-EE-EEEEEEEeCCEEEEEEecCCCCCceeEEEEEEC
Confidence 7655443332 21 11 2222 2446778877754 235555554
No 241
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.13 E-value=0.0012 Score=66.84 Aligned_cols=186 Identities=9% Similarity=0.080 Sum_probs=102.0
Q ss_pred cEEEcCCCc-EEEEe-cCC----eEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCCCc--------------
Q 017371 83 DASMDKNGV-IYTAT-RDG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANG-------------- 139 (372)
Q Consensus 83 ~i~~d~~G~-l~v~~-~~g----~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~g-------------- 139 (372)
++++.+||+ |.++. ..| .|+.++ +|+............ ++++.+||+ |+++.....
T Consensus 129 ~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~-~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFS-CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp EEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSC-CEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred EEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccc-eEEEEeCCCEEEEEEECCccccccccccccCCC
Confidence 577888985 43443 333 688888 566544322222234 799999996 666543332
Q ss_pred --EEEEc-CCC-cE-EEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCC-----
Q 017371 140 --LHKVS-EDG-VE-NFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS----- 208 (372)
Q Consensus 140 --v~~~~-~~g-~~-~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t----- 208 (372)
|++++ .++ .+ .+....... .....++.+.+||+ |+++... .......|+.+|.++
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~-~~~~~~~~~SpDg~~l~~~~~~-------------~~~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDE-PKWMGGAELSDDGRYVLLSIRE-------------GCDPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTC-TTCEEEEEECTTSCEEEEEEEC-------------SSSSCCEEEEEEGGGSSSSS
T ss_pred CEEEEEECCCCcccceEEeccCCC-CeEEEEEEEcCCCCEEEEEEEc-------------cCCCccEEEEEECccccccc
Confidence 77777 444 21 222111111 12344778999996 4443210 001246789998765
Q ss_pred -C--eEEEEeCCccCcceEEEecCCCEEEEEeCC---CCeEEEEEccCCCCcceeeeccCCC-CCCceeEEcCCCCEEEE
Q 017371 209 -N--ITTLVADGFYFANGVALSRDEDYVVVCESW---KFRCRKYWLKGERKGKLETFAENLP-GAPDNINLAPDGTFWIA 281 (372)
Q Consensus 209 -~--~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~---~~~i~~~~~~g~~~~~~~~~~~~~~-g~p~~i~~d~~G~lwva 281 (372)
+ +.+.+..... .....+++||+.+|+.... +.+|+.+++++........+..... ....++...+++.++++
T Consensus 274 ~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 274 TGILKWVKLIDNFE-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp CSSCCCEEEECSSS-SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEE
T ss_pred CCccceEEeeCCCC-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEE
Confidence 4 4555544322 2233588999989887643 3479999987643222233332222 12345666656666666
Q ss_pred Eec
Q 017371 282 IIK 284 (372)
Q Consensus 282 ~~~ 284 (372)
...
T Consensus 353 ~~~ 355 (710)
T 2xdw_A 353 YLH 355 (710)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 242
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.12 E-value=0.0051 Score=58.26 Aligned_cols=182 Identities=12% Similarity=0.119 Sum_probs=97.7
Q ss_pred CCCccEEEcCCCcEEEEecCCeEEEEe--CCceE-EEEecCCCcccCeEEc--CCCCEEEE-eCCCcEEEEc-CCC--cE
Q 017371 79 NHPEDASMDKNGVIYTATRDGWIKRLQ--DGTWV-NWKFIDSQTLVGLTST--KEGHLIIC-DNANGLHKVS-EDG--VE 149 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~-~~~~~~~~p~~gl~~d--~dG~l~v~-~~~~gv~~~~-~~g--~~ 149 (372)
....++++.+++.+..++.+|.|..|+ +++.. .+....+... .+++. +++.++++ ..+..+..++ .++ ..
T Consensus 163 ~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 241 (464)
T 3v7d_B 163 GGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR-CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVP 241 (464)
T ss_dssp SCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEEESSSCEEEEEEETTSCEEEEECCCCCCC-
T ss_pred cCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccE-EEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccc
Confidence 456678888888888888999999999 55433 2322223334 67776 56665554 4334466677 443 21
Q ss_pred EEeeecCC----------------cccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE
Q 017371 150 NFLSYVNG----------------SKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL 213 (372)
Q Consensus 150 ~l~~~~~~----------------~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~ 213 (372)
........ ...+...-..+.++|++.++ +..++.|..+|..+++...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~-----------------~~~d~~i~vwd~~~~~~~~ 304 (464)
T 3v7d_B 242 DHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVS-----------------GSYDNTLIVWDVAQMKCLY 304 (464)
T ss_dssp -----CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEE-----------------EETTSCEEEEETTTTEEEE
T ss_pred cccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEE-----------------EeCCCeEEEEECCCCcEEE
Confidence 11000000 00000011223444554443 2356789999988777655
Q ss_pred EeCCc-cCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 214 VADGF-YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 214 ~~~~~-~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
...+. .....++++++++.++.+. .++.|..+++...+ ....+. ...+....+..+ +++.++...
T Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~--~~~~~~-~h~~~v~~~~~~--~~~l~s~s~ 370 (464)
T 3v7d_B 305 ILSGHTDRIYSTIYDHERKRCISAS-MDTTIRIWDLENGE--LMYTLQ-GHTALVGLLRLS--DKFLVSAAA 370 (464)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEEC--SSEEEEEET
T ss_pred EecCCCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCc--EEEEEe-CCCCcEEEEEEc--CCEEEEEeC
Confidence 44432 3345788999999666554 46678888875432 112222 222334456665 445444443
No 243
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.08 E-value=0.00025 Score=65.77 Aligned_cols=151 Identities=13% Similarity=0.115 Sum_probs=94.9
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEec--CC-CcccCeEEcCCCCEEEEeCC-C--c--EEEEc-CCC-
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI--DS-QTLVGLTSTKEGHLIICDNA-N--G--LHKVS-EDG- 147 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~--~~-~p~~gl~~d~dG~l~v~~~~-~--g--v~~~~-~~g- 147 (372)
...++++.++|.+.++..++.+.+++ +++....... .. ... .+++.++|..+++... . + +..++ ..+
T Consensus 178 ~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~ 256 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLS-KINFIADDTVLIAASLKKGKGIVLTKISIKSGN 256 (365)
T ss_dssp CCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEE-EEEEEETTEEEEEEEESSSCCEEEEEEEEETTE
T ss_pred ceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEE-EEEEcCCCCEEEEEecCCcceeEEeecccccce
Confidence 46789999999887776677788888 5543322211 12 234 7899999986665322 2 2 34455 333
Q ss_pred cEEEee-ecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE-EeCCcc-CcceE
Q 017371 148 VENFLS-YVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VADGFY-FANGV 224 (372)
Q Consensus 148 ~~~l~~-~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~-~~~~~~-~~~gi 224 (372)
...... ...+ ....+..+++.|||++.++- ..++.|..+|..+++... +..+.. ....+
T Consensus 257 ~~~~~~~~~~~-~~~~V~~~~~Spdg~~lasg-----------------s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v 318 (365)
T 4h5i_A 257 TSVLRSKQVTN-RFKGITSMDVDMKGELAVLA-----------------SNDNSIALVKLKDLSMSKIFKQAHSFAITEV 318 (365)
T ss_dssp EEEEEEEEEES-SCSCEEEEEECTTSCEEEEE-----------------ETTSCEEEEETTTTEEEEEETTSSSSCEEEE
T ss_pred ecceeeeeecC-CCCCeEeEEECCCCCceEEE-----------------cCCCEEEEEECCCCcEEEEecCcccCCEEEE
Confidence 222111 1111 12346789999999977752 256789999998887544 334333 34689
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEccC
Q 017371 225 ALSRDEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 225 ~~~~dg~~l~v~~~~~~~i~~~~~~g 250 (372)
+|+|||+ ++++.+.++.|..+++..
T Consensus 319 ~fSpdg~-~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 319 TISPDST-YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EECTTSC-EEEEEETTSEEEEEECCT
T ss_pred EECCCCC-EEEEEeCCCeEEEEEcCC
Confidence 9999998 555666677888888754
No 244
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.08 E-value=0.00015 Score=66.92 Aligned_cols=185 Identities=6% Similarity=-0.113 Sum_probs=101.0
Q ss_pred CCccEEEcCCC-cEEEEecCCeEEEEe--CCc----eEEEEecCCCcccCeEEcCCCCEEEE-eCCCcEEEEc-CCC-cE
Q 017371 80 HPEDASMDKNG-VIYTATRDGWIKRLQ--DGT----WVNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG-VE 149 (372)
Q Consensus 80 ~p~~i~~d~~G-~l~v~~~~g~i~~~~--~g~----~~~~~~~~~~p~~gl~~d~dG~l~v~-~~~~gv~~~~-~~g-~~ 149 (372)
...++++.++| .|..+..+|.|..|+ +++ ...+........ .+++.++|+++++ .....+..++ ..+ ..
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 135 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAAT-FVRWSPNEDKFAVGSGARVISVCYFEQENDW 135 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEE-EEECCTTSSCCEEEESSSCEEECCC-----C
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceE-EEEECCCCCEEEEEecCCeEEEEEECCcccc
Confidence 45678899887 466667899999998 444 222222233445 8999999875554 4334466666 333 10
Q ss_pred EEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC------------------eE
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN------------------IT 211 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~------------------~~ 211 (372)
.+.....+.....+..+++.++|++.++-. .++.|..+|..++ +.
T Consensus 136 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 198 (377)
T 3dwl_C 136 WVSKHLKRPLRSTILSLDWHPNNVLLAAGC-----------------ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTV 198 (377)
T ss_dssp CCCEEECSSCCSCEEEEEECTTSSEEEEEE-----------------SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEE
T ss_pred eeeeEeecccCCCeEEEEEcCCCCEEEEEe-----------------CCCEEEEEEEEecccCCCccccccccccchhhh
Confidence 011111221123567899999998766532 3566777765321 11
Q ss_pred EEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcc--eeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 212 TLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGK--LETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 212 ~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~--~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
............++++|+++.++.+. .++.|..+++...+... ...+. ...+....+++.++|.+.++...
T Consensus 199 ~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~ 271 (377)
T 3dwl_C 199 CAEYPSGGWVHAVGFSPSGNALAYAG-HDSSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESAIVAAGYN 271 (377)
T ss_dssp EECCCCSSSEEEEEECTTSSCEEEEE-TTTEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEESS
T ss_pred hhcccCCceEEEEEECCCCCEEEEEe-CCCcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEcC
Confidence 11111122245788999999665554 56678888886543211 11121 12233567888889887766644
No 245
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.07 E-value=0.00044 Score=63.90 Aligned_cols=195 Identities=13% Similarity=0.067 Sum_probs=99.0
Q ss_pred CccEEEcCCCc-EEEEe-c--CCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCCCcEEEEc-CCC-cEEE
Q 017371 81 PEDASMDKNGV-IYTAT-R--DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG-VENF 151 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~-~--~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~gv~~~~-~~g-~~~l 151 (372)
+.++++.++|. |++.. . +..|+.++ +++...+.........++.+.|||+ |+++.....++.++ .++ .+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 55667888885 34443 3 34688888 5555554333333331478899997 44444445688898 555 4443
Q ss_pred eeecCCccccccc--ceEEccCC---cEEEEeCCCCCCCcccccccc---cccCCCeEEEEeCCCCeEEEEeCCccCcce
Q 017371 152 LSYVNGSKLRFAN--DVVEASDG---SLYFTVSSSKYLPHEYCLDIL---EGKPHGQLLKYDPSSNITTLVADGFYFANG 223 (372)
Q Consensus 152 ~~~~~~~~~~~~~--~l~~d~dG---~i~vtd~~~~~~~~~~~~~~~---~~~~~g~v~~~d~~t~~~~~~~~~~~~~~g 223 (372)
.....+ -.+. .|++.... .+|.... .+..+.....+. .......|+.+|.++++.+.+.........
T Consensus 118 ~~~~~~---~~~~g~~l~~~~~~~~~~~~~~~~--~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~ 192 (396)
T 3c5m_A 118 YTVDEE---WKGYGTWVANSDCTKLVGIEILKR--DWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGH 192 (396)
T ss_dssp EECCTT---EEEEEEEEECTTSSEEEEEEEEGG--GCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEE
T ss_pred Eecccc---cCCCCCEEEeccCCcccccccccc--ccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCccccc
Confidence 321111 0000 11111000 0000000 000000000000 113456899999988887776644444567
Q ss_pred EEEec-CCCEEEEEeCCC-----CeEEEEEccCCCCcceeeeccCCCC-CCceeEEcCCCC-EEEEEe
Q 017371 224 VALSR-DEDYVVVCESWK-----FRCRKYWLKGERKGKLETFAENLPG-APDNINLAPDGT-FWIAII 283 (372)
Q Consensus 224 i~~~~-dg~~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~g-~p~~i~~d~~G~-lwva~~ 283 (372)
+.++| |++.++++.... .+|+.+++++.+. ..+....++ .+..+++.+||+ |+++..
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV---RKIKEHAEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC---EESSCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce---eEeeccCCCccccceEECCCCCEEEEEec
Confidence 88999 787666654332 4799998876432 122211111 244578899996 555443
No 246
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.06 E-value=0.0031 Score=61.56 Aligned_cols=180 Identities=8% Similarity=-0.027 Sum_probs=101.0
Q ss_pred CCCccEEEcCCCcEEEEe-cCCeEE------------------EEe-CCceEE---EE---------ecCCCcccCeEEc
Q 017371 79 NHPEDASMDKNGVIYTAT-RDGWIK------------------RLQ-DGTWVN---WK---------FIDSQTLVGLTST 126 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~-~~g~i~------------------~~~-~g~~~~---~~---------~~~~~p~~gl~~d 126 (372)
.+..++++.+||.++++. .|+.|. .+. +|.... +. ....... ++++.
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~-~vawS 94 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR-VCKPS 94 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE-EEEEC
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE-EEEEC
Confidence 467899999999888876 566662 111 221111 10 0112245 89999
Q ss_pred CCCCEEEE-eCCCcEEEEcCCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEE
Q 017371 127 KEGHLIIC-DNANGLHKVSEDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKY 204 (372)
Q Consensus 127 ~dG~l~v~-~~~~gv~~~~~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~ 204 (372)
|||....+ .....+..++.++ ...+. ............+++.|||++.++ +..+|.|..+
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAs-----------------gs~DGtVkIW 156 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVV-----------------GNEDGELQFF 156 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEE-----------------EETTSEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEE-----------------EcCCCEEEEE
Confidence 99975444 4444466676544 33322 111111235678999999976654 2257888889
Q ss_pred eCCCCe--------EEEEeCCc----cCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcc-eeeeccCCCCCCceeE
Q 017371 205 DPSSNI--------TTLVADGF----YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGK-LETFAENLPGAPDNIN 271 (372)
Q Consensus 205 d~~t~~--------~~~~~~~~----~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~-~~~~~~~~~g~p~~i~ 271 (372)
|..++. ...+.... ..-..++|+||| + ++...++.|..+++++.+... ...+..........++
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--L-aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--L-VAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--E-EEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc--E-EEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 988764 23332111 234578999998 4 444456778888887754321 1122111122356677
Q ss_pred EcCCCCEEEEE
Q 017371 272 LAPDGTFWIAI 282 (372)
Q Consensus 272 ~d~~G~lwva~ 282 (372)
+. |+..++.
T Consensus 234 Fs--g~~LASa 242 (588)
T 2j04_A 234 IV--DYKVVLT 242 (588)
T ss_dssp EE--TTEEEEE
T ss_pred EE--CCEEEEE
Confidence 76 4544444
No 247
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.04 E-value=0.0012 Score=62.14 Aligned_cols=157 Identities=11% Similarity=0.054 Sum_probs=94.2
Q ss_pred CCCCCCCccEEEcCCCcEEEEecCCeEEEEe-C-C-ceEEEE--------ecCCCcccCeEEcCCC-CEEEEeCC-CcEE
Q 017371 75 EGSVNHPEDASMDKNGVIYTATRDGWIKRLQ-D-G-TWVNWK--------FIDSQTLVGLTSTKEG-HLIICDNA-NGLH 141 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~G~l~v~~~~g~i~~~~-~-g-~~~~~~--------~~~~~p~~gl~~d~dG-~l~v~~~~-~gv~ 141 (372)
.+.-....++++.++|.++++..+|.|..|+ . + +..... ....... .+++.++| +++++... ..|.
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVIT-AAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEE-EEEECSSCTTEEEEEETTSCEE
T ss_pred cCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceE-EEEECCCCCcEEEEEeCCCeEE
Confidence 3444567789999999766655899999998 4 2 211111 1122345 89999998 76665444 4477
Q ss_pred EEc-CCC-c-----EEEeeecCCc-------ccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCC
Q 017371 142 KVS-EDG-V-----ENFLSYVNGS-------KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS 207 (372)
Q Consensus 142 ~~~-~~g-~-----~~l~~~~~~~-------~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 207 (372)
.++ .++ . ..+....... ....+..+++.++|++.++-. . +.|..+|..
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-----------------~-~~v~iwd~~ 314 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-----------------Y-LSVKVWDLN 314 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-----------------S-SEEEEEETT
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-----------------C-CeEEEEeCC
Confidence 777 554 3 2221110000 001567899999998777522 3 788888876
Q ss_pred C-CeEEEEeCCccC----------------cceEEEecCCCEEEEEeCCCCeEEEEEccCC
Q 017371 208 S-NITTLVADGFYF----------------ANGVALSRDEDYVVVCESWKFRCRKYWLKGE 251 (372)
Q Consensus 208 t-~~~~~~~~~~~~----------------~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~ 251 (372)
+ ++.......... ...++|++++++| ++.+.++.|..|++.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 315 MENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp CCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTC
T ss_pred CCccccceeeccccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCC
Confidence 4 432221111111 1128999999966 55566778888888654
No 248
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.03 E-value=0.0016 Score=59.12 Aligned_cols=97 Identities=8% Similarity=0.049 Sum_probs=57.6
Q ss_pred CCCCCCCccEEEcCC---C-cEEEEecCCeEEEEe-C--Cce--EEEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc
Q 017371 75 EGSVNHPEDASMDKN---G-VIYTATRDGWIKRLQ-D--GTW--VNWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS 144 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~---G-~l~v~~~~g~i~~~~-~--g~~--~~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~ 144 (372)
.+.-....++++.++ | .|+++..+|.|..|+ . +.. ..+....+... .+++.++|+++++... ..+..++
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL-DVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEE-EEEECcCCCEEEEEcCCCcEEEEE
Confidence 343446678999987 4 566677899999998 3 433 23333334455 9999999986655444 4477777
Q ss_pred -CCC-cEEEeeecCCcccccccceEE--ccCCcEEEE
Q 017371 145 -EDG-VENFLSYVNGSKLRFANDVVE--ASDGSLYFT 177 (372)
Q Consensus 145 -~~g-~~~l~~~~~~~~~~~~~~l~~--d~dG~i~vt 177 (372)
.++ ...+.. .. ..+..+++ .++|+++++
T Consensus 115 ~~~~~~~~~~~-~~----~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 115 LSSNQAIQIAQ-HD----APVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp TTTTEEEEEEE-CS----SCEEEEEEEECSSCEEEEE
T ss_pred cCCCCceeecc-cc----CceEEEEEEeCCCCCEEEE
Confidence 555 322211 11 23445666 566654443
No 249
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.03 E-value=0.0014 Score=59.48 Aligned_cols=174 Identities=9% Similarity=0.027 Sum_probs=98.1
Q ss_pred CCccEEEcCCCc-EEEEe-cC--C--eEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeC--------------
Q 017371 80 HPEDASMDKNGV-IYTAT-RD--G--WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDN-------------- 136 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~-~~--g--~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~-------------- 136 (372)
...++++.|+|. |++.. .. + .|+.++ +|+.+.+..... .. ++++.|||+ |+++..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~-~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IR-SLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EE-EEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-cc-ceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 455688999994 55554 22 3 488888 556555544333 55 889999996 555431
Q ss_pred -------------CCcEEEEc-CCC-c-EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCe
Q 017371 137 -------------ANGLHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQ 200 (372)
Q Consensus 137 -------------~~gv~~~~-~~g-~-~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~ 200 (372)
...|+.++ .+| . +.+.. + ....+++.+|| ++++..... . .....+...
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-----~~~~~~~spdg-~~~~~~~~~---~-----~~~~~~~~~ 201 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-----RFSSGIWHRDK-IVVNVPHRE---I-----IPQYFKFWD 201 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE--E-----TTCEEEEETTE-EEEEEECCC---S-----SCCSSCCEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC--C-----CcccccCCCCe-EEEEEeccc---c-----ccccccccc
Confidence 13477777 555 4 44432 1 35578889999 766532100 0 000001457
Q ss_pred EEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCC-------CCeEEEEEccCCCCcceeeeccCCCCCCce-eEE
Q 017371 201 LLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW-------KFRCRKYWLKGERKGKLETFAENLPGAPDN-INL 272 (372)
Q Consensus 201 v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~-------~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~-i~~ 272 (372)
|+.+| +++.+.+... .. -..++|||+.+++.... ..+|+.++ .+ +.............+ +..
T Consensus 202 l~~~d--~~~~~~l~~~--~~-~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~----~~~~l~~~~~~~~~~~~~~ 271 (347)
T 2gop_A 202 IYIWE--DGKEEKMFEK--VS-FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD-GK----EVMGILDEVDRGVGQAKIK 271 (347)
T ss_dssp EEEEE--TTEEEEEEEE--ES-EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC-SS----CEEESSTTCCSEEEEEEEE
T ss_pred EEEeC--CCceEEeccC--cc-eeeECCCCCEEEEEEccccCCccccceEEEEC-CC----ceEeccccCCcccCCccEE
Confidence 99999 5777666544 21 22349999988776533 34788877 32 222222222222333 667
Q ss_pred cCCCCEEEEEe
Q 017371 273 APDGTFWIAII 283 (372)
Q Consensus 273 d~~G~lwva~~ 283 (372)
+ +| +++...
T Consensus 272 s-dg-~~~~~~ 280 (347)
T 2gop_A 272 D-GK-VYFTLF 280 (347)
T ss_dssp T-TE-EEEEEE
T ss_pred c-Cc-EEEEEe
Confidence 7 88 666544
No 250
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.03 E-value=0.0006 Score=62.44 Aligned_cols=147 Identities=10% Similarity=0.042 Sum_probs=82.6
Q ss_pred CcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCccccccccc
Q 017371 118 QTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 194 (372)
Q Consensus 118 ~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~ 194 (372)
... .+++.|+|+++++... ..|..++ .++ .........+ ....+..+++.++|+..++-+
T Consensus 18 ~v~-~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~s--------------- 80 (345)
T 3fm0_A 18 RCW-FLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEG-HQRTVRKVAWSPCGNYLASAS--------------- 80 (345)
T ss_dssp CEE-EEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSS-CSSCEEEEEECTTSSEEEEEE---------------
T ss_pred cEE-EEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccc-cCCcEEEEEECCCCCEEEEEE---------------
Confidence 445 8999999987666444 4466666 444 2111111111 123567899999998777532
Q ss_pred ccCCCeEEEEeCCCCeEEE--EeCC-ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeE
Q 017371 195 GKPHGQLLKYDPSSNITTL--VADG-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNIN 271 (372)
Q Consensus 195 ~~~~g~v~~~d~~t~~~~~--~~~~-~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~ 271 (372)
.++.+..+|..+++.+. ...+ -.....++|+|+++.|+.+. .+..|..+++.....................++
T Consensus 81 --~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 81 --FDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS-RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp --TTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred --CCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE-CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 34556666655444332 2232 23346789999999655544 566788888764322221111112223345678
Q ss_pred EcCCCCEEEEEec
Q 017371 272 LAPDGTFWIAIIK 284 (372)
Q Consensus 272 ~d~~G~lwva~~~ 284 (372)
+.++|++.++...
T Consensus 158 ~~p~~~~l~s~s~ 170 (345)
T 3fm0_A 158 WHPSQELLASASY 170 (345)
T ss_dssp ECSSSSCEEEEET
T ss_pred ECCCCCEEEEEeC
Confidence 8888876655543
No 251
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.02 E-value=0.00069 Score=61.95 Aligned_cols=176 Identities=10% Similarity=0.124 Sum_probs=96.9
Q ss_pred CCCcEEEEe-cCCeEEEEe-CCceEEEEecCCCcccCeEEcCC----C----CEEEEeCC---CcE--EEEc-CCC-cEE
Q 017371 88 KNGVIYTAT-RDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKE----G----HLIICDNA---NGL--HKVS-EDG-VEN 150 (372)
Q Consensus 88 ~~G~l~v~~-~~g~i~~~~-~g~~~~~~~~~~~p~~gl~~d~d----G----~l~v~~~~---~gv--~~~~-~~g-~~~ 150 (372)
+...+++++ ..+.|+.|+ +|+...... .++++ ++.+.++ | .+++++.. +.| +.++ .++ +..
T Consensus 38 p~~s~ii~t~k~~gL~Vydl~G~~l~~~~-~g~~n-nVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSLDGKMLHSYN-TGKLN-NVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGGCEEEEEETTTEEEEEETTSCEEEEEC-CSCEE-EEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CCccEEEEEcCCCCEEEEcCCCcEEEEcc-CCCcc-cEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 344667766 667899999 777655443 25666 6555441 2 24555543 334 4456 344 444
Q ss_pred Eeee-cC-CcccccccceEE--ccC-Cc--EEEEeCCCCCCCcccccccccccCCCeEEEEeC---CCCeEE----EEeC
Q 017371 151 FLSY-VN-GSKLRFANDVVE--ASD-GS--LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP---SSNITT----LVAD 216 (372)
Q Consensus 151 l~~~-~~-~~~~~~~~~l~~--d~d-G~--i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~---~t~~~~----~~~~ 216 (372)
+... .+ +..+..|.+++. ++. |+ +|+++ .+|++..|+. ..++++ .-+.
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~------------------k~G~~~q~~l~~~~~g~~~~~lVR~f~ 177 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG------------------KEGEFEQYELKADKNGYISGKKVRAFK 177 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC------------------SSSEEEEEEEEECTTSCEEEEEEEEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC------------------CCCeEEEEEEEeCCCCcccceEEEEec
Confidence 4221 01 122367889998 764 55 55543 3355555432 223221 1122
Q ss_pred CccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCC--Ccce-eeec-cCCCCCCceeEEc--CCC--CEEEEEec
Q 017371 217 GFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER--KGKL-ETFA-ENLPGAPDNINLA--PDG--TFWIAIIK 284 (372)
Q Consensus 217 ~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~--~~~~-~~~~-~~~~g~p~~i~~d--~~G--~lwva~~~ 284 (372)
.-..+.|++++++..+||+++.. ..||+|+.+... .... ..+. ..+..-+.||++. ++| .|++++.+
T Consensus 178 lgsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 178 MNSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp CSSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred CCCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 23467899999988899999976 569999965322 1111 1111 1222347889884 444 46666655
No 252
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.02 E-value=0.0071 Score=54.23 Aligned_cols=185 Identities=14% Similarity=0.125 Sum_probs=101.1
Q ss_pred CCCCCCCccEEEcCC-Cc-EEEEecCCeEEEEe--CCce------EEEEecCCCcccCeEEcCCCCEEEEeCCCc-EEEE
Q 017371 75 EGSVNHPEDASMDKN-GV-IYTATRDGWIKRLQ--DGTW------VNWKFIDSQTLVGLTSTKEGHLIICDNANG-LHKV 143 (372)
Q Consensus 75 ~g~~~~p~~i~~d~~-G~-l~v~~~~g~i~~~~--~g~~------~~~~~~~~~p~~gl~~d~dG~l~v~~~~~g-v~~~ 143 (372)
.|--....+|++.|+ +. |..+..||.|..|+ .++. ..+..-..... .+++.++|++.++....+ +..+
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~-~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS-DVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEE-EEEECCCCCEEEEEcccccceEE
Confidence 354456778999976 55 45566899999888 3221 11111123345 899999998766654444 5555
Q ss_pred c-CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC--cc
Q 017371 144 S-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FY 219 (372)
Q Consensus 144 ~-~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--~~ 219 (372)
+ ..+ ......... .......+.+++...++- ..++.+..+|............ ..
T Consensus 114 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~s~-----------------s~d~~~~~~d~~~~~~~~~~~~~~~~ 172 (340)
T 4aow_A 114 DLTTGTTTRRFVGHT----KDVLSVAFSSDNRQIVSG-----------------SRDKTIKLWNTLGVCKYTVQDESHSE 172 (340)
T ss_dssp ETTTTEEEEEEECCS----SCEEEEEECTTSSCEEEE-----------------ETTSCEEEECTTSCEEEEECSSSCSS
T ss_pred eecccceeeeecCCC----CceeEEEEeecCccceee-----------------cCCCeEEEEEeCCCceEEEEeccccC
Confidence 5 333 221111111 123345566677655542 2456677777654433322211 12
Q ss_pred CcceEEEecCCC-EEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 220 FANGVALSRDED-YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 220 ~~~gi~~~~dg~-~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
....+++++++. .++++...+..|..+++...+ ....+. ...+....++++++|++.++...
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~--~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~ 235 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK--LKTNHI-GHTGYLNTVTVSPDGSLCASGGK 235 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred cccceEEccCCCCcEEEEEcCCCEEEEEECCCCc--eeeEec-CCCCcEEEEEECCCCCEEEEEeC
Confidence 234566776653 244555556667777775432 112222 22334567889999988776654
No 253
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.02 E-value=0.00061 Score=64.43 Aligned_cols=183 Identities=9% Similarity=-0.043 Sum_probs=112.6
Q ss_pred CCCccEEEcCCCc--EEEEecCCeEEEEe-CC--c-------eEEEEecCCCcccCeEEcC-CCCEEEEeCC-CcEEEEc
Q 017371 79 NHPEDASMDKNGV--IYTATRDGWIKRLQ-DG--T-------WVNWKFIDSQTLVGLTSTK-EGHLIICDNA-NGLHKVS 144 (372)
Q Consensus 79 ~~p~~i~~d~~G~--l~v~~~~g~i~~~~-~g--~-------~~~~~~~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~ 144 (372)
....++++.+++. |.++..+|.|..|+ .. . ...+........ .+++.+ ++.++++... ..|..++
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE-DVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEE-EEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEe-eeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 3567899998775 56666899999999 32 1 122222233455 899998 5677766544 4477777
Q ss_pred -CCC-----cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCC-Ce-EEEEe
Q 017371 145 -EDG-----VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-NI-TTLVA 215 (372)
Q Consensus 145 -~~g-----~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t-~~-~~~~~ 215 (372)
.++ ...+. . . ...++.+++.++|. ++++- ..++.|..+|..+ ++ +..+.
T Consensus 261 ~~~~~~~~~~~~~~-~-~---~~~v~~i~~~p~~~~~l~tg-----------------~~dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 261 TRNNNTSKPSHTVD-A-H---TAEVNCLSFNPYSEFILATG-----------------SADKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp TTCSCSSSCSEEEE-C-C---SSCEEEEEECSSCTTEEEEE-----------------ETTSEEEEEETTCTTSCSEEEE
T ss_pred CCCCCCCcceeEee-c-C---CCCeEEEEeCCCCCCEEEEE-----------------eCCCeEEEEeCCCCCCCeEEee
Confidence 432 22221 1 1 13567899999885 66652 2467888888765 22 33333
Q ss_pred CCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcc----------eeeec-cCCCCCCceeEEcCCCC-EEEEEe
Q 017371 216 DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGK----------LETFA-ENLPGAPDNINLAPDGT-FWIAII 283 (372)
Q Consensus 216 ~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~----------~~~~~-~~~~g~p~~i~~d~~G~-lwva~~ 283 (372)
........++++|+++.++++...++.|..|++....... ...+. ......+..+++.++|. +.++..
T Consensus 319 ~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 319 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 3334456789999998788887778889999886421100 11111 11233477899999998 666665
Q ss_pred c
Q 017371 284 K 284 (372)
Q Consensus 284 ~ 284 (372)
.
T Consensus 399 ~ 399 (430)
T 2xyi_A 399 E 399 (430)
T ss_dssp T
T ss_pred C
Confidence 4
No 254
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.01 E-value=0.0065 Score=55.26 Aligned_cols=181 Identities=12% Similarity=0.087 Sum_probs=102.8
Q ss_pred CCCCCCccEEE-----cC-CCc-EEEEecCCeEEEEe-C-Cc-------e-EEEEecCCCcccCeEEcCCCCEEEEeCC-
Q 017371 76 GSVNHPEDASM-----DK-NGV-IYTATRDGWIKRLQ-D-GT-------W-VNWKFIDSQTLVGLTSTKEGHLIICDNA- 137 (372)
Q Consensus 76 g~~~~p~~i~~-----d~-~G~-l~v~~~~g~i~~~~-~-g~-------~-~~~~~~~~~p~~gl~~d~dG~l~v~~~~- 137 (372)
|.-....++++ .+ +|. |..+..|+.|..|+ . ++ . ..+........ .+++.++|.+.++...
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~-~~~~~~~~~~l~s~s~D 97 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS-DLALSQENCFAISSSWD 97 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEE-EEEECSSTTEEEEEETT
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceE-EEEECCCCCEEEEEcCC
Confidence 33334566777 44 664 55666899999888 2 21 1 11111122344 8999999987766544
Q ss_pred CcEEEEc-CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE
Q 017371 138 NGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 214 (372)
Q Consensus 138 ~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~ 214 (372)
..+..++ .++ ...+... ...+..+++.++|+..++-+ .++.|..+|.........
T Consensus 98 ~~v~lwd~~~~~~~~~~~~h-----~~~v~~v~~sp~~~~l~s~~-----------------~d~~i~~wd~~~~~~~~~ 155 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRFVGH-----QSEVYSVAFSPDNRQILSAG-----------------AEREIKLWNILGECKFSS 155 (343)
T ss_dssp SEEEEEETTSSCEEEEEECC-----CSCEEEEEECSSTTEEEEEE-----------------TTSCEEEEESSSCEEEEC
T ss_pred CcEEEEECCCCcEEEEEcCC-----CCcEEEEEECCCCCEEEEEc-----------------CCCEEEEEeccCCceeee
Confidence 4466777 566 3333211 12467899999998766532 456788888763332222
Q ss_pred eC---CccCcceEEEecCC----------CEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEE
Q 017371 215 AD---GFYFANGVALSRDE----------DYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIA 281 (372)
Q Consensus 215 ~~---~~~~~~gi~~~~dg----------~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva 281 (372)
.. .......++++|++ . ++++...++.|..++..+ .....+. ...+....+++.++|++.++
T Consensus 156 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~---~~~~~~~-~h~~~v~~~~~s~~g~~l~s 230 (343)
T 2xzm_R 156 AEKENHSDWVSCVRYSPIMKSANKVQPFAP-YFASVGWDGRLKVWNTNF---QIRYTFK-AHESNVNHLSISPNGKYIAT 230 (343)
T ss_dssp CTTTSCSSCEEEEEECCCCCSCSCCCSSCC-EEEEEETTSEEEEEETTT---EEEEEEE-CCSSCEEEEEECTTSSEEEE
T ss_pred ecccCCCceeeeeeeccccccccccCCCCC-EEEEEcCCCEEEEEcCCC---ceeEEEc-CccccceEEEECCCCCEEEE
Confidence 21 11123457788776 4 444555566777777432 1112222 22334567889999987766
Q ss_pred Eec
Q 017371 282 IIK 284 (372)
Q Consensus 282 ~~~ 284 (372)
...
T Consensus 231 gs~ 233 (343)
T 2xzm_R 231 GGK 233 (343)
T ss_dssp EET
T ss_pred EcC
Confidence 554
No 255
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.01 E-value=0.00085 Score=69.98 Aligned_cols=180 Identities=14% Similarity=0.104 Sum_probs=110.2
Q ss_pred CCCCccEEEcCCCc-EEEEecCCeEEEEe-CCceEEEEecCCCcccCeEEcCCCC-EEEEeCCCcEEEEc-CCC--cEEE
Q 017371 78 VNHPEDASMDKNGV-IYTATRDGWIKRLQ-DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNANGLHKVS-EDG--VENF 151 (372)
Q Consensus 78 ~~~p~~i~~d~~G~-l~v~~~~g~i~~~~-~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~gv~~~~-~~g--~~~l 151 (372)
-....+++++++|. |.+|+.+|.|..|+ .+...........+...+++.+ |+ |..+..+..+..++ .++ ...+
T Consensus 17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEE
T ss_pred CCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEE
Confidence 34678899999996 45566899999998 3322222222223333899998 87 55555556677888 556 3333
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe-----------C-Ccc
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA-----------D-GFY 219 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~-----------~-~~~ 219 (372)
. .. ..+..++++++|+..++ +..+|.|..+|.++++...+. . ...
T Consensus 96 ~--~~----~~V~~v~~sp~g~~l~s-----------------gs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 96 F--VP----GKITSIDTDASLDWMLI-----------------GLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp E--CS----SCEEEEECCTTCSEEEE-----------------EETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred c--CC----CCEEEEEECCCCCEEEE-----------------EcCCCcEEEEECCCCccccceeccccccccccccCCC
Confidence 2 11 24678899999976654 225678999998877653211 0 112
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccC-----------------CCCCCceeEEcCCCCEEEEE
Q 017371 220 FANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAEN-----------------LPGAPDNINLAPDGTFWIAI 282 (372)
Q Consensus 220 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~-----------------~~g~p~~i~~d~~G~lwva~ 282 (372)
....++|+|++..++++...++.| .+++...+. ...+... ..+....+++.++|++.++.
T Consensus 153 ~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg 229 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI 229 (902)
T ss_dssp CCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE
T ss_pred CeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE
Confidence 346799999754455566667777 888764321 1122111 01234568889999877776
Q ss_pred ec
Q 017371 283 IK 284 (372)
Q Consensus 283 ~~ 284 (372)
..
T Consensus 230 s~ 231 (902)
T 2oaj_A 230 HE 231 (902)
T ss_dssp ET
T ss_pred EC
Confidence 65
No 256
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.00 E-value=0.00012 Score=70.25 Aligned_cols=165 Identities=14% Similarity=0.112 Sum_probs=93.8
Q ss_pred ceEEEEecCCCcccCeEEcCCCC--EEEEeCCCcEEEEcCCC-c--EEEee---ec-CC---cccccccceEEccC----
Q 017371 108 TWVNWKFIDSQTLVGLTSTKEGH--LIICDNANGLHKVSEDG-V--ENFLS---YV-NG---SKLRFANDVVEASD---- 171 (372)
Q Consensus 108 ~~~~~~~~~~~p~~gl~~d~dG~--l~v~~~~~gv~~~~~~g-~--~~l~~---~~-~~---~~~~~~~~l~~d~d---- 171 (372)
+++.++.....|. +|++.+||+ |||++....|+.++.+| . +.+.. .. .+ .....+-+|+++++
T Consensus 5 ~v~~va~gL~~P~-~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n 83 (463)
T 2wg3_C 5 CIQEVVSGLRQPV-GALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEEEESSEE-EEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHH
T ss_pred EEEEeccCCCCce-EEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCC
Confidence 3556667778999 999999985 99998765577777544 2 11111 01 11 01234568999985
Q ss_pred CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC--------CeEEEEeC-----CccCcceEEEecCCCEEEEEeC
Q 017371 172 GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS--------NITTLVAD-----GFYFANGVALSRDEDYVVVCES 238 (372)
Q Consensus 172 G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t--------~~~~~~~~-----~~~~~~gi~~~~dg~~l~v~~~ 238 (372)
|.||++.+...-+... -......+|.|+.... .+.+++.+ ..++...++|+|||. |||+.-
T Consensus 84 ~~lYv~yt~~~~~~~~-----~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~G 157 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAI-----GPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILG 157 (463)
T ss_dssp CEEEEEEEECCCSSCS-----SSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEEC
T ss_pred CEEEEEEeCCCCCccc-----CCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeC
Confidence 8999975320000000 0000013676665421 12233322 234445799999996 999742
Q ss_pred C-----------------CCeEEEEEccCCC------Cc-----------ceeeeccCCCCCCceeEEcCC-----CCEE
Q 017371 239 W-----------------KFRCRKYWLKGER------KG-----------KLETFAENLPGAPDNINLAPD-----GTFW 279 (372)
Q Consensus 239 ~-----------------~~~i~~~~~~g~~------~~-----------~~~~~~~~~~g~p~~i~~d~~-----G~lw 279 (372)
. ...|+|+++++.. .. ..+++...+ ..|-++++|++ |+||
T Consensus 158 d~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~-RNp~gla~dp~tg~~~G~l~ 236 (463)
T 2wg3_C 158 DGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGL-HDPGRCAVDRHPTDININLT 236 (463)
T ss_dssp CTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECC-SSCCBEEEESSCSSTTCSEE
T ss_pred CCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECC-CCcceEEECCCCCCcccceE
Confidence 1 3469999998731 10 124444322 24889999997 6555
Q ss_pred E
Q 017371 280 I 280 (372)
Q Consensus 280 v 280 (372)
+
T Consensus 237 ~ 237 (463)
T 2wg3_C 237 I 237 (463)
T ss_dssp E
T ss_pred E
Confidence 4
No 257
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.0036 Score=56.71 Aligned_cols=173 Identities=10% Similarity=0.050 Sum_probs=93.6
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe--CCceEEE--E-ec-CC-CcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC---
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNW--K-FI-DS-QTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--- 147 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~--~-~~-~~-~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--- 147 (372)
...+++++++ .|..+..+|.|..++ .+..+.. . .. .. ... .+++.|+|+++++... ..+..++ ..+
T Consensus 16 ~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 16 KIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIR-SVAWRPHTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp CEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEE-EEEECTTSSEEEEEETTSCEEEEEC------
T ss_pred ceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEE-EEEECCCCCEEEEEeCCCcEEEEEcccCcCc
Confidence 4456777776 677777899999998 3332222 1 11 22 345 8999999987666544 4466666 211
Q ss_pred ---cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC-C---eEEEEeCC-cc
Q 017371 148 ---VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS-N---ITTLVADG-FY 219 (372)
Q Consensus 148 ---~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t-~---~~~~~~~~-~~ 219 (372)
.+.+ ....+. ...+..+++.++|+..++-+ .++.|..+|... + +......+ -.
T Consensus 94 ~~~~~~~-~~~~~h-~~~V~~v~~sp~g~~las~s-----------------~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 94 TFEMDLL-AIIEGH-ENEVKGVAWSNDGYYLATCS-----------------RDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp -CCCEEE-EEEC-----CEEEEEECTTSCEEEEEE-----------------TTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred cccceeE-EEEcCC-CCcEEEEEECCCCCEEEEEe-----------------CCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 1111 111221 13567899999998777532 466788887632 2 22222222 23
Q ss_pred CcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCC
Q 017371 220 FANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPD 275 (372)
Q Consensus 220 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~ 275 (372)
..+.++++|+++.|.. .+.+..|..++...........+. ...+....+.++++
T Consensus 155 ~v~~v~~~p~~~~l~s-~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 155 DVKHVIWHPSEALLAS-SSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDFDKT 208 (330)
T ss_dssp CEEEEEECSSSSEEEE-EETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCS
T ss_pred ceEEEEECCCCCEEEE-EcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEecCC
Confidence 3467899999985544 444556766665432111111221 22233445667776
No 258
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.99 E-value=0.0026 Score=59.00 Aligned_cols=178 Identities=15% Similarity=0.083 Sum_probs=107.7
Q ss_pred cEEEcCC--CcEEEEecCCeEEEEe--CCce-EEEEe-----cCCCcccCeEEcC-CCCEEEEeCC-CcEEEEc-C-CC-
Q 017371 83 DASMDKN--GVIYTATRDGWIKRLQ--DGTW-VNWKF-----IDSQTLVGLTSTK-EGHLIICDNA-NGLHKVS-E-DG- 147 (372)
Q Consensus 83 ~i~~d~~--G~l~v~~~~g~i~~~~--~g~~-~~~~~-----~~~~p~~gl~~d~-dG~l~v~~~~-~gv~~~~-~-~g- 147 (372)
++.+.++ ..|+.++.++.|..|| .++. ..+.. ...... .+.+.+ +++++++... ..+..+| . .+
T Consensus 162 ~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 162 SCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL-SLSINSLNANMFISGSCDTTVRLWDLRITSR 240 (380)
T ss_dssp CCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE-EEEECSSSCCEEEEEETTSCEEEEETTTTCC
T ss_pred EEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE-EEEeecCCCCEEEEEECCCeEEEEECCCCCc
Confidence 3444443 3588888999999999 4543 23311 112234 677765 6777766544 4467777 4 33
Q ss_pred -cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc--------
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF-------- 218 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~-------- 218 (372)
...+. +. ...++.+++.++|+.+++-+ .++.|..+|..+++........
T Consensus 241 ~~~~~~----~h-~~~v~~v~~~p~~~~l~s~s-----------------~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~ 298 (380)
T 3iz6_a 241 AVRTYH----GH-EGDINSVKFFPDGQRFGTGS-----------------DDGTCRLFDMRTGHQLQVYNREPDRNDNEL 298 (380)
T ss_dssp CCEEEC----CC-SSCCCEEEECTTSSEEEEEC-----------------SSSCEEEEETTTTEEEEEECCCCSSSCCSS
T ss_pred ceEEEC----Cc-CCCeEEEEEecCCCeEEEEc-----------------CCCeEEEEECCCCcEEEEeccccccccccc
Confidence 33331 11 13577899999998877633 5678899998877655443221
Q ss_pred cCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcc-eeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 219 YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGK-LETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 219 ~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~-~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
.....++|+++|+.++. ...++.|..++....+... .........+....+++.++|.+.++...
T Consensus 299 ~~v~~~~~s~~g~~l~~-g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 299 PIVTSVAFSISGRLLFA-GYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp CSCSEEEECSSSSEEEE-ECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred CceEEEEECCCCCEEEE-EECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 12467899999995555 4556778888875432111 11111123345677899999987766554
No 259
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.0014 Score=59.90 Aligned_cols=181 Identities=13% Similarity=0.163 Sum_probs=100.9
Q ss_pred CCccEEEcCC--C-cEEEEecCCeEEEEe--CCceEEE---EecCCCcccCeEEcCC--CCEEEEeCC-CcEEEEc-CCC
Q 017371 80 HPEDASMDKN--G-VIYTATRDGWIKRLQ--DGTWVNW---KFIDSQTLVGLTSTKE--GHLIICDNA-NGLHKVS-EDG 147 (372)
Q Consensus 80 ~p~~i~~d~~--G-~l~v~~~~g~i~~~~--~g~~~~~---~~~~~~p~~gl~~d~d--G~l~v~~~~-~gv~~~~-~~g 147 (372)
...++++.++ | .|+.++.+|.|..|+ +++.... ........ .+++.++ |+++++... ..+..++ .++
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceE-EEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 4567888654 5 566667899999998 5653222 22223445 8999988 776555444 4466777 433
Q ss_pred --cEEEeeecCCcccccccceEEcc-------------CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe--
Q 017371 148 --VENFLSYVNGSKLRFANDVVEAS-------------DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-- 210 (372)
Q Consensus 148 --~~~l~~~~~~~~~~~~~~l~~d~-------------dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~-- 210 (372)
......... ...+..+++.+ ++.+.++-. .++.|..+|..+++
T Consensus 136 ~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 136 GTTSPIIIDAH---AIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-----------------ADNLVKIWKYNSDAQT 195 (379)
T ss_dssp SCCCEEEEECC---TTCEEEEEECCCC----------CTTCEEEEEE-----------------TTSCEEEEEEETTTTE
T ss_pred CceeeEEecCC---CCceEEEEEcCccccccccccCCCCCCEEEEEe-----------------CCCeEEEEEecCCCcc
Confidence 222211111 12456778887 576665422 45667777764432
Q ss_pred EEE--EeCC-ccCcceEEEecC---CCEEEEEeCCCCeEEEEEccCCCCcceeeeccC--CCCCCceeEEcCCCCEEEEE
Q 017371 211 TTL--VADG-FYFANGVALSRD---EDYVVVCESWKFRCRKYWLKGERKGKLETFAEN--LPGAPDNINLAPDGTFWIAI 282 (372)
Q Consensus 211 ~~~--~~~~-~~~~~gi~~~~d---g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~--~~g~p~~i~~d~~G~lwva~ 282 (372)
... ...+ ......++++|+ ++.+ ++...++.|..|++.............. ..+....++++++|++.++.
T Consensus 196 ~~~~~~~~~h~~~v~~~~~sp~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 274 (379)
T 3jrp_A 196 YVLESTLEGHSDWVRDVAWSPTVLLRSYL-ASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 274 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEE-EEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred eeeEEEEecccCcEeEEEECCCCCCCCeE-EEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEe
Confidence 111 1222 233457899999 6644 4444566788888765321111122111 22335567888998755544
No 260
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.97 E-value=0.0045 Score=62.34 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=39.6
Q ss_pred cEEEcCCCcEEEEecCCeEEEEe--CCceEEEEecC-C-----CcccCeEEcCCCCEEEEeCC------CcEEEEc-CCC
Q 017371 83 DASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFID-S-----QTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG 147 (372)
Q Consensus 83 ~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~~-~-----~p~~gl~~d~dG~l~v~~~~------~gv~~~~-~~g 147 (372)
+++++ ++.||+++.+|+|+.+| +|+...-.... . .......+. +|.+|++... ..|+.+| .+|
T Consensus 123 ~~a~~-~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG 200 (677)
T 1kb0_A 123 GVALW-KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETG 200 (677)
T ss_dssp CCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTC
T ss_pred CceEE-CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCC
Confidence 45554 67999999999999999 67654322222 1 111122333 6788887642 3488899 778
No 261
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.97 E-value=0.00046 Score=64.62 Aligned_cols=180 Identities=14% Similarity=0.154 Sum_probs=105.8
Q ss_pred CCccEEEcC--CCcEEEEecCC----eEEEEe-CC-ceEEEEecC--------------CCcccCeEEcC---CCCEEEE
Q 017371 80 HPEDASMDK--NGVIYTATRDG----WIKRLQ-DG-TWVNWKFID--------------SQTLVGLTSTK---EGHLIIC 134 (372)
Q Consensus 80 ~p~~i~~d~--~G~l~v~~~~g----~i~~~~-~g-~~~~~~~~~--------------~~p~~gl~~d~---dG~l~v~ 134 (372)
..++|++|+ ++.||++...| .|++.+ .| .++.+.... .... +|++++ .+.||++
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVF-WLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEE-EEEECCTTSTTCEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCccccccccccccee-EEEeCCCCCCCEEEEE
Confidence 467899998 78999998776 799987 44 455543211 1223 578885 6789998
Q ss_pred eCCCcEEEEcCCC--cEEEeeec--C------------CcccccccceEEcc--CCcEEEEeCCCCCCCccccccccccc
Q 017371 135 DNANGLHKVSEDG--VENFLSYV--N------------GSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGK 196 (372)
Q Consensus 135 ~~~~gv~~~~~~g--~~~l~~~~--~------------~~~~~~~~~l~~d~--dG~i~vtd~~~~~~~~~~~~~~~~~~ 196 (372)
....||++.+..| .+.+.... + +........|++|+ .++||++..
T Consensus 135 ~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~----------------- 197 (394)
T 3b7f_A 135 TSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS----------------- 197 (394)
T ss_dssp EETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-----------------
T ss_pred ecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-----------------
Confidence 7667899887555 45432110 1 01112345788886 468999632
Q ss_pred CCCeEEEEeCCCCeEEEEeCCcc-------------CcceEEEecC-CCEEEEEeCCCCeEEEEEccCCCCcceeeeccC
Q 017371 197 PHGQLLKYDPSSNITTLVADGFY-------------FANGVALSRD-EDYVVVCESWKFRCRKYWLKGERKGKLETFAEN 262 (372)
Q Consensus 197 ~~g~v~~~d~~t~~~~~~~~~~~-------------~~~gi~~~~d-g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~ 262 (372)
.+.|++.+.....++.+..+.. ....++++++ .+.+|+... ..|++..-.|.. .+.+...
T Consensus 198 -~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~--~gl~~s~D~G~t---W~~~~~~ 271 (394)
T 3b7f_A 198 -SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH--CGIYRMDRREGV---WKRIGDA 271 (394)
T ss_dssp -TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET--TEEEEEETTTTE---EECGGGG
T ss_pred -CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC--CeEEEeCCCCCc---ceECCCC
Confidence 3568888765455555433221 1235677775 466888753 468877643321 1122111
Q ss_pred CCC----CCceeEEc--CCCCEEEEEe
Q 017371 263 LPG----APDNINLA--PDGTFWIAII 283 (372)
Q Consensus 263 ~~g----~p~~i~~d--~~G~lwva~~ 283 (372)
++. +...+++| ..+.+|++..
T Consensus 272 l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 272 MPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp SCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred CCCCCccceEEEEECCCCCCEEEEEec
Confidence 221 12246777 4578999874
No 262
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.96 E-value=0.00093 Score=70.79 Aligned_cols=171 Identities=10% Similarity=0.076 Sum_probs=102.6
Q ss_pred ccEEEcCCCc-EEEEecCCeEEEEe-C-CceEEEEe-----------cCCCcccCeEEc-CCCC-EEEEeCCCcEEEEc-
Q 017371 82 EDASMDKNGV-IYTATRDGWIKRLQ-D-GTWVNWKF-----------IDSQTLVGLTST-KEGH-LIICDNANGLHKVS- 144 (372)
Q Consensus 82 ~~i~~d~~G~-l~v~~~~g~i~~~~-~-g~~~~~~~-----------~~~~p~~gl~~d-~dG~-l~v~~~~~gv~~~~- 144 (372)
...++.++|. |.++ .++.|+.++ . +.+..+.. ..+... .++++ |||+ |.++. ...++.++
T Consensus 248 ~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~-~~~~S~pdG~~la~~~-~~~i~~~~~ 324 (1045)
T 1k32_A 248 YPRHLNTDGRRILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKF-AEDFSPLDGDLIAFVS-RGQAFIQDV 324 (1045)
T ss_dssp CEEEEEESSSCEEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGG-EEEEEECGGGCEEEEE-TTEEEEECT
T ss_pred ceeeEcCCCCEEEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccc-eeeecCCCCCEEEEEE-cCEEEEEcC
Confidence 3457777775 4444 577888887 3 33332211 011345 89999 9996 44444 44578888
Q ss_pred CCC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEE-EEeCCCCeEEEEeCCccCc
Q 017371 145 EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLL-KYDPSSNITTLVADGFYFA 221 (372)
Q Consensus 145 ~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~-~~d~~t~~~~~~~~~~~~~ 221 (372)
.++ ...+. ...+ ..+..+++. ||+ |+++. ...+++ .+|.++++.+.+.......
T Consensus 325 ~~~~~~~~~-~~~~---~~~~~~~~s-dg~~l~~~s------------------~~~~l~~~~d~~~~~~~~l~~~~~~~ 381 (1045)
T 1k32_A 325 SGTYVLKVP-EPLR---IRYVRRGGD-TKVAFIHGT------------------REGDFLGIYDYRTGKAEKFEENLGNV 381 (1045)
T ss_dssp TSSBEEECS-CCSC---EEEEEECSS-SEEEEEEEE------------------TTEEEEEEEETTTCCEEECCCCCCSE
T ss_pred CCCceEEcc-CCCc---ceEEeeeEc-CCCeEEEEE------------------CCCceEEEEECCCCCceEecCCccce
Confidence 445 33321 1111 134566777 775 43321 145788 8998877766655333455
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEE
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAI 282 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~ 282 (372)
..++++|||+.++++.. ...|+.+++.+.+ .........+....+++++||+..+..
T Consensus 382 ~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~---~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 382 FAMGVDRNGKFAVVAND-RFEIMTVDLETGK---PTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp EEEEECTTSSEEEEEET-TSEEEEEETTTCC---EEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred eeeEECCCCCEEEEECC-CCeEEEEECCCCc---eEEeccCCCCCccceEECCCCCeEEEE
Confidence 68999999998887764 5689999986543 222222333445789999999855443
No 263
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.92 E-value=0.0033 Score=57.19 Aligned_cols=168 Identities=10% Similarity=0.030 Sum_probs=95.6
Q ss_pred cEEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcC-------CCCEEEEeCCCcEEEEc-CCC--cEEEeeecCC
Q 017371 91 VIYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTK-------EGHLIICDNANGLHKVS-EDG--VENFLSYVNG 157 (372)
Q Consensus 91 ~l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~-------dG~l~v~~~~~gv~~~~-~~g--~~~l~~~~~~ 157 (372)
.+..|..+|.|..|+ +++. ..+.. .... .+.+.+ |+.+.+-+....+..++ ..+ ...+... .
T Consensus 50 ~l~sg~~Dg~v~iwd~~~~~~~~~~~~--~~v~-~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~--~ 124 (343)
T 3lrv_A 50 VCMCRCEDGALHFTQLKDSKTITTITT--PNPR-TGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD--S 124 (343)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEE--ECCC-TTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC--C
T ss_pred EEEEECCCCcEEEEECCCCcEEEEEec--CCce-eeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeecC--C
Confidence 566677899999998 5543 33321 2223 433433 44444333333333344 222 1111111 0
Q ss_pred cccccccceEEcc--CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC--ccCcceEEEecCCCEE
Q 017371 158 SKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFANGVALSRDEDYV 233 (372)
Q Consensus 158 ~~~~~~~~l~~d~--dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--~~~~~gi~~~~dg~~l 233 (372)
...+..+++.+ +|+++++-+ .++.|..+|..+++....... ......++++||++ +
T Consensus 125 --~~~v~~~~~~~~~~~~~l~s~s-----------------~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~ 184 (343)
T 3lrv_A 125 --ANEIIYMYGHNEVNTEYFIWAD-----------------NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-L 184 (343)
T ss_dssp --SSCEEEEECCC---CCEEEEEE-----------------TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-E
T ss_pred --CCCEEEEEcCCCCCCCEEEEEe-----------------CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-E
Confidence 12466788889 888777532 567899999887776544322 22356889999998 4
Q ss_pred EEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 234 VVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 234 ~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+++...++.|..+++...+... ..+.....+....+++.++|++.++...
T Consensus 185 lasg~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~l~s~~~ 234 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWMVVECD 234 (343)
T ss_dssp EEEECTTSCEEEEESSCTTSCC-EECCCCTTSCEEEEEECTTSSEEEEEES
T ss_pred EEEEcCCCEEEEEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 4554566789889886543220 1232212344677899999987776655
No 264
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.90 E-value=4.4e-05 Score=71.14 Aligned_cols=136 Identities=15% Similarity=0.156 Sum_probs=59.9
Q ss_pred CCcEEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEe-CCCcEEEEc-CCC-c-EEEeeecCCccccc
Q 017371 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICD-NANGLHKVS-EDG-V-ENFLSYVNGSKLRF 162 (372)
Q Consensus 89 ~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~-~~~gv~~~~-~~g-~-~~l~~~~~~~~~~~ 162 (372)
++.+|+++.+|.|+.+| +|+...-... +... +..+..+|.+|++. ....++.+| .+| . ..+....+. . .
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~--~-~ 83 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVL-QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE--L-V 83 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSC-CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH--H-H
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC-CCce-ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc--c-c
Confidence 67999999999999999 6765432222 4444 44344567777764 335588898 567 2 222111110 0 0
Q ss_pred ccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCCCe
Q 017371 163 ANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFR 242 (372)
Q Consensus 163 ~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~ 242 (372)
....++..++.||++. .++.|+.+|+++|+..+.... ......+|+++.+|+... ++.
T Consensus 84 ~~sp~~~~~~~v~~g~------------------~dg~v~a~D~~tG~~~w~~~~---~~~~~~~p~~~~v~~~~~-dg~ 141 (369)
T 2hz6_A 84 QASPCRSSDGILYMGK------------------KQDIWYVIDLLTGEKQQTLSS---AFADSLSPSTSLLYLGRT-EYT 141 (369)
T ss_dssp TTCSCC-----CCCCE------------------EEEEEEEECCC-------------------------EEEEEE-EEE
T ss_pred ccCceEecCCEEEEEe------------------CCCEEEEEECCCCcEEEEecC---CCcccccccCCEEEEEec-CCE
Confidence 0111222456676632 357899999998887654322 122445567777877653 457
Q ss_pred EEEEEccCC
Q 017371 243 CRKYWLKGE 251 (372)
Q Consensus 243 i~~~~~~g~ 251 (372)
|+.++..+.
T Consensus 142 v~a~d~~tG 150 (369)
T 2hz6_A 142 ITMYDTKTR 150 (369)
T ss_dssp EECCCSSSS
T ss_pred EEEEECCCC
Confidence 888887643
No 265
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.87 E-value=0.013 Score=52.12 Aligned_cols=176 Identities=15% Similarity=0.107 Sum_probs=95.7
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe-CC---c-eEEEEecCCCcccCeEEcC--CCCEEEEeCC-CcEEEEc-CCC-
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ-DG---T-WVNWKFIDSQTLVGLTSTK--EGHLIICDNA-NGLHKVS-EDG- 147 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~-~g---~-~~~~~~~~~~p~~gl~~d~--dG~l~v~~~~-~gv~~~~-~~g- 147 (372)
....+++++++|. |..+..+|.|..|+ .+ + ...+..-.+... .+++.+ +|+++++... ..+..++ .++
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~-~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE-EEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 3456789999885 45556899999998 42 2 223322223345 888864 3776665444 4466677 544
Q ss_pred cEEEeeecCCcccccccceEEccC--CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe---EEEEeCCccCcc
Q 017371 148 VENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI---TTLVADGFYFAN 222 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~d--G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~---~~~~~~~~~~~~ 222 (372)
...+... .+. ...++.+++.++ |.+.++-+ .++.|..+|..++. ...+.......+
T Consensus 89 ~~~~~~~-~~h-~~~v~~v~~~p~~~g~~l~s~s-----------------~d~~v~~wd~~~~~~~~~~~~~~h~~~v~ 149 (297)
T 2pm7_B 89 WSQIAVH-AVH-SASVNSVQWAPHEYGPMLLVAS-----------------SDGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (297)
T ss_dssp BCCCEEE-CCC-SSCEEEEEECCGGGCSEEEEEE-----------------TTSEEEEEEBCSSSCBCCEEEECCSSCEE
T ss_pred eEEEEEe-ecC-CCceeEEEeCcCCCCcEEEEEE-----------------CCCcEEEEEecCCCceeeeeeecccCccc
Confidence 2221111 111 124667888876 66665422 46677777765432 122222222345
Q ss_pred eEEEecC-------------CCEEEEEeCCCCeEEEEEccCCCCcc-e-eeeccCCCCCCceeEEcCCC
Q 017371 223 GVALSRD-------------EDYVVVCESWKFRCRKYWLKGERKGK-L-ETFAENLPGAPDNINLAPDG 276 (372)
Q Consensus 223 gi~~~~d-------------g~~l~v~~~~~~~i~~~~~~g~~~~~-~-~~~~~~~~g~p~~i~~d~~G 276 (372)
.++++|+ ++ ++++...+..|..+++...+... . ..+ ....+....+++.+++
T Consensus 150 ~~~~~p~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 150 SASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTV 216 (297)
T ss_dssp EEEECCCC------------CC-EEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCC
T ss_pred eEeecCCcccccccCCCCCCcc-eEEEEcCCCcEEEEEEcCCCceEEEEEEe-cCCCCceEEEEECCCC
Confidence 6778876 34 45555556677777775432111 1 122 1223345678888885
No 266
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.85 E-value=0.0064 Score=57.03 Aligned_cols=226 Identities=11% Similarity=-0.009 Sum_probs=119.9
Q ss_pred CccEEEcCCCc-EEEEecCCeEEEEe--CCceE-EEEecCCCcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC---cEEE
Q 017371 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGTWV-NWKFIDSQTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG---VENF 151 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~-~~~~~~~~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g---~~~l 151 (372)
..++++.++|. |.+|+.+|.|..|+ +++.. .+........ .+.. ++.+.++... ..+..++ ... ...+
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~-~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~ 226 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG-SLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATL 226 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE-EEee--CCCEEEEEeCCCceeEeeecccceeeEEe
Confidence 45788888884 55566888888888 44432 2222222223 4444 4555554433 3355555 322 2222
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeE-----EEEeCCccCcceEEE
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-----TLVADGFYFANGVAL 226 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~-----~~~~~~~~~~~gi~~ 226 (372)
... ......+.+.++|+..++-. .++.+..++..+++. ............+++
T Consensus 227 ~~h-----~~~~~~~~~~~~g~~l~s~~-----------------~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 284 (420)
T 4gga_A 227 SGH-----SQEVCGLRWAPDGRHLASGG-----------------NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 284 (420)
T ss_dssp ECC-----SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEE
T ss_pred ccc-----ccceeeeeecCCCCeeeeee-----------------ccccceEEeeccccccceeeeeecccCCceeeeee
Confidence 111 12345677778887666532 456677777654432 111111222346788
Q ss_pred ecCCCEEEEEe--CCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHH
Q 017371 227 SRDEDYVVVCE--SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLA 304 (372)
Q Consensus 227 ~~dg~~l~v~~--~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~ 304 (372)
+|++..++.+. +.+..|..+++...+. ...+. .......+...++++..++..+.
T Consensus 285 ~p~~~~~la~~~gs~D~~I~iwd~~t~~~--~~~~~--~~~~v~~~~~~~~~~~lv~~sg~------------------- 341 (420)
T 4gga_A 285 CPWQSNVLATGGGTSDRHIRIWNVCSGAC--LSAVD--AHSQVCSILWSPHYKELISGHGF------------------- 341 (420)
T ss_dssp CTTCTTEEEEEECTTTCEEEEEETTTTEE--EEEEE--CSSCEEEEEEETTTTEEEEEECT-------------------
T ss_pred CCCcccEEEEEeecCCCEEEEEeCCcccc--ceeec--cccceeeeeecCCCCeEEEEEec-------------------
Confidence 88776566543 3445677777654321 11221 22235567778888766665431
Q ss_pred hcCccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 305 AYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 305 ~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
..+.|..+| ++++.+..+....+ .++++... +|+..+..-....|.++++
T Consensus 342 -------------~d~~I~iwd~~~~~~v~~l~gH~~----~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 342 -------------AQNQLVIWKYPTMAKVAELKGHTS----RVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp -------------TTCCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred -------------CCCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 134566666 46888887764333 47777775 4443333334456766664
No 267
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.84 E-value=0.00014 Score=73.58 Aligned_cols=129 Identities=8% Similarity=0.002 Sum_probs=82.4
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEecCC----CcccCeEEcCCCCEE-EEeC---------CCcEEEEc
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDS----QTLVGLTSTKEGHLI-ICDN---------ANGLHKVS 144 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~----~p~~gl~~d~dG~l~-v~~~---------~~gv~~~~ 144 (372)
+.++.+.++|.++..+.+|.|+.++ +|+.+.+..... ... .+++.|||+.. ++.. ...++.++
T Consensus 18 ~~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 18 TFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNAS-NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCS-EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccccccee-eEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 3467788888766666788999999 566555443221 145 88999999844 3322 13477777
Q ss_pred -CCC-c---EEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc
Q 017371 145 -EDG-V---ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF 218 (372)
Q Consensus 145 -~~g-~---~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~ 218 (372)
.+| . ..+ . .....+++.|||+ |.++ ..+.|+.+|..+++...+....
T Consensus 97 ~~~g~~~~~~~l----~----~~~~~~~~SPDG~~la~~-------------------~~~~i~~~~~~~g~~~~l~~~~ 149 (719)
T 1z68_A 97 LSNGEFVRGNEL----P----RPIQYLCWSPVGSKLAYV-------------------YQNNIYLKQRPGDPPFQITFNG 149 (719)
T ss_dssp TTTTEECCSSCC----C----SSBCCEEECSSTTCEEEE-------------------ETTEEEEESSTTSCCEECCCCC
T ss_pred CCCCccccceec----C----cccccceECCCCCEEEEE-------------------ECCeEEEEeCCCCCcEEEecCC
Confidence 455 3 222 1 2356789999996 4443 2357898988777665443211
Q ss_pred -------------------cCcceEEEecCCCEEEEEe
Q 017371 219 -------------------YFANGVALSRDEDYVVVCE 237 (372)
Q Consensus 219 -------------------~~~~gi~~~~dg~~l~v~~ 237 (372)
....+++|+|||+.|+++.
T Consensus 150 ~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 150 RENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp BTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred CcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 1124799999999888764
No 268
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.84 E-value=0.0004 Score=70.23 Aligned_cols=195 Identities=11% Similarity=0.051 Sum_probs=98.4
Q ss_pred CccEEEcCCCc-EEEEec---------CCeEEEEe--CCce---EEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-
Q 017371 81 PEDASMDKNGV-IYTATR---------DGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS- 144 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~~---------~g~i~~~~--~g~~---~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~- 144 (372)
..++++.+||+ |.++.. ++.|+.++ +|+. ..+ .+... .+++.|||+..+......|+.++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~-~~~~SPDG~~la~~~~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQ-YLCWSPVGSKLAYVYQNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBC-CEEECSSTTCEEEEETTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Ccccc-cceECCCCCEEEEEECCeEEEEeC
Confidence 56789999996 555543 57888898 5554 332 23455 89999999643333355688888
Q ss_pred CCC-cEEEeeec-CC-----cc--------cccccceEEccCCc-EEEEeCC-CCCC---C-----ccc--cccc-----
Q 017371 145 EDG-VENFLSYV-NG-----SK--------LRFANDVVEASDGS-LYFTVSS-SKYL---P-----HEY--CLDI----- 192 (372)
Q Consensus 145 ~~g-~~~l~~~~-~~-----~~--------~~~~~~l~~d~dG~-i~vtd~~-~~~~---~-----~~~--~~~~----- 192 (372)
.+| ...+.... .. .+ +.....+++.|||+ |.++... .... . ..+ ...+
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 555 43332110 00 00 01224789999996 4433211 0000 0 000 0000
Q ss_pred ccccCCCeEEEEeCCCCeEE---EEeC------CccCcceEEEecCCCEEEEE--eCCC--CeEEEEE----ccCCCCcc
Q 017371 193 LEGKPHGQLLKYDPSSNITT---LVAD------GFYFANGVALSRDEDYVVVC--ESWK--FRCRKYW----LKGERKGK 255 (372)
Q Consensus 193 ~~~~~~g~v~~~d~~t~~~~---~~~~------~~~~~~gi~~~~dg~~l~v~--~~~~--~~i~~~~----~~g~~~~~ 255 (372)
-.......|+.+|.++++.. .+.. .......++|+||++ ++++ +... .+|+.++ ..+.+...
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 00112337888888776531 2111 111235688999976 5444 2222 3577888 54432221
Q ss_pred eee-eccCCCCCCc-----eeEEcCCCC-EEE
Q 017371 256 LET-FAENLPGAPD-----NINLAPDGT-FWI 280 (372)
Q Consensus 256 ~~~-~~~~~~g~p~-----~i~~d~~G~-lwv 280 (372)
... ......+..+ .+++.+||+ +++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 297 TQEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp GGEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred EEecccccCCceEccccCCccEECCCCCeEEE
Confidence 110 0012223233 678899996 444
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.82 E-value=0.013 Score=57.99 Aligned_cols=45 Identities=13% Similarity=0.121 Sum_probs=31.0
Q ss_pred CCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCC
Q 017371 317 GGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 363 (372)
Q Consensus 317 ~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~ 363 (372)
...+.+..+| .+|+++..+..+.+.....+ ..+.+|++|++...+
T Consensus 491 t~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~--~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 491 TLDGYLKARDSDTGDLLWKFKIPSGAIGYPM--TYTHKGTQYVAIYYG 536 (599)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEEC
T ss_pred CCCCeEEEEECCCCCEEEEeeCCCCcEeccE--EEEeCCEEEEEEEcc
Confidence 3357899999 56999999988766422221 224689999987644
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.82 E-value=0.032 Score=55.16 Aligned_cols=64 Identities=17% Similarity=0.121 Sum_probs=39.5
Q ss_pred cEEEc-CCCc----EEEEecCCeEEEEe--CCceEEEEecCC-----CcccCeEEcCCCCEEEEeC------CCcEEEEc
Q 017371 83 DASMD-KNGV----IYTATRDGWIKRLQ--DGTWVNWKFIDS-----QTLVGLTSTKEGHLIICDN------ANGLHKVS 144 (372)
Q Consensus 83 ~i~~d-~~G~----l~v~~~~g~i~~~~--~g~~~~~~~~~~-----~p~~gl~~d~dG~l~v~~~------~~gv~~~~ 144 (372)
++++. .+|. ||+++.+++|+.+| +|+...-..... .......+. +|.+|++.. ...|+.+|
T Consensus 110 g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D 188 (599)
T 1w6s_A 110 GLAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYD 188 (599)
T ss_dssp CCEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEE
T ss_pred ceEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEE
Confidence 45663 2567 99999999999999 776543222211 111122232 678888753 24588899
Q ss_pred -CCC
Q 017371 145 -EDG 147 (372)
Q Consensus 145 -~~g 147 (372)
.+|
T Consensus 189 ~~TG 192 (599)
T 1w6s_A 189 VKTG 192 (599)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 778
No 271
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.78 E-value=0.0099 Score=54.65 Aligned_cols=149 Identities=9% Similarity=-0.014 Sum_probs=88.7
Q ss_pred CCCccEEEcC-CC-cEEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcCC---CCEEEE-eCCCcEEEEc-CCC--
Q 017371 79 NHPEDASMDK-NG-VIYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKE---GHLIIC-DNANGLHKVS-EDG-- 147 (372)
Q Consensus 79 ~~p~~i~~d~-~G-~l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~d---G~l~v~-~~~~gv~~~~-~~g-- 147 (372)
....++++.+ ++ .++.++.+|.|..|+ .++............ .+.+.+. +.++++ .....+..++ .++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVY-SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCcee-eeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 3456788887 55 466666899999999 454433333333445 7777764 335444 4444577788 555
Q ss_pred cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe--EEEE----------
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLV---------- 214 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~--~~~~---------- 214 (372)
...+... ...+..+++.+++. ++++- ..++.|..+|..+++ ...+
T Consensus 179 ~~~~~~~-----~~~v~~~~~~~~~~~ll~~~-----------------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 179 SHILQGH-----RQEILAVSWSPRYDYILATA-----------------SADSRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp CEEECCC-----CSCEEEEEECSSCTTEEEEE-----------------ETTSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred eeeecCC-----CCcEEEEEECCCCCcEEEEE-----------------cCCCcEEEEECCCCCccccccccccccccee
Confidence 4333211 12456889999886 55542 245678888875443 1111
Q ss_pred -----eCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCC
Q 017371 215 -----ADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE 251 (372)
Q Consensus 215 -----~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~ 251 (372)
.........++++++++.++.+. .++.|..+++...
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~ 277 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSSNG 277 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTC
T ss_pred eccccccccCceeEEEEcCCCCEEEEec-CCCeEEEEECCCC
Confidence 00112235688999999777665 4567888888653
No 272
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.77 E-value=0.0035 Score=59.17 Aligned_cols=240 Identities=12% Similarity=0.023 Sum_probs=126.1
Q ss_pred CCccEEEcC-CC-cEEEEecCCeEEEEe-CC-ceEEEEecCC---CcccCeEEcCCCCEEEEeCCCc-EEEEcCCC--cE
Q 017371 80 HPEDASMDK-NG-VIYTATRDGWIKRLQ-DG-TWVNWKFIDS---QTLVGLTSTKEGHLIICDNANG-LHKVSEDG--VE 149 (372)
Q Consensus 80 ~p~~i~~d~-~G-~l~v~~~~g~i~~~~-~g-~~~~~~~~~~---~p~~gl~~d~dG~l~v~~~~~g-v~~~~~~g--~~ 149 (372)
...+|++.| +| .|+.+..||.|..|| .+ ..+.+..... ... .++++++|.++++....| |..++.++ ..
T Consensus 166 ~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~ 244 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFC-SLDVSASSRMVVTGDNVGNVILLNMDGKELW 244 (435)
T ss_dssp CCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCC-CEEEETTTTEEEEECSSSBEEEEESSSCBCC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEE-EEEECCCCCEEEEEeCCCcEeeeccCcceeE
Confidence 456789986 56 455666899999999 44 4444433211 234 788999998777654444 66677433 22
Q ss_pred EEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEE-Ee--CC-ccCcceE
Q 017371 150 NFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTL-VA--DG-FYFANGV 224 (372)
Q Consensus 150 ~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~-~~--~~-~~~~~gi 224 (372)
.+ .+. ...+..+++.+++. ++++- ..++.|..+|..+.+... +. .+ -...+.+
T Consensus 245 ~~----~~h-~~~v~~v~~~p~~~~~~~s~-----------------s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 302 (435)
T 4e54_B 245 NL----RMH-KKKVTHVALNPCCDWFLATA-----------------SVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAA 302 (435)
T ss_dssp CS----BCC-SSCEEEEEECTTCSSEEEEE-----------------ETTSBCCEEETTTCCSSSCCSBCCBCSSCEEEC
T ss_pred EE----ecc-cceEEeeeecCCCceEEEEe-----------------cCcceeeEEecccccccceEEEeeeccccccce
Confidence 21 111 12466889988875 44432 135566677765433211 11 11 1123467
Q ss_pred EEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCC-----CCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhH
Q 017371 225 ALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENL-----PGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLI 299 (372)
Q Consensus 225 ~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~-----~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~ 299 (372)
+|+|||++|+.+. .++.|..|++....... .+.... ...+-.....+++++.+........
T Consensus 303 ~~spdg~~l~s~~-~D~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----------- 368 (435)
T 4e54_B 303 CFSPDGARLLTTD-QKSEIRVYSASQWDCPL--GLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPN----------- 368 (435)
T ss_dssp CBCTTSSEEEEEE-SSSCEEEEESSSSSSEE--EECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTT-----------
T ss_pred eECCCCCeeEEEc-CCCEEEEEECCCCccce--EEecccccccccceeEEEEEcCCCCEEEEEEcCCCC-----------
Confidence 8999999666554 56678888876432111 111110 0112334556667655544321000
Q ss_pred HHHHHhcCccccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeE-EE-CCEEEEEeCCCCeEEEEeC
Q 017371 300 KHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGL-QV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 300 r~~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~-~~-~g~L~igs~~~~~i~~~~~ 371 (372)
..+......+.|..++ .+|+.+..+..+... .+.++. +. +|++.+++. .+.|.++++
T Consensus 369 -----------~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~---~v~s~~~fspdg~~lasg~-d~~i~iW~~ 428 (435)
T 4e54_B 369 -----------FKSCTPYELRTIDVFDGNSGKMMCQLYDPESS---GISSLNEFNPMGDTLASAM-GYHILIWSQ 428 (435)
T ss_dssp -----------SCCSSTTCCCCEEEECSSSCCEEEEECCSSCC---CCCCEEEECTTSSCEEEEC-SSEEEECCC
T ss_pred -----------eEEEEecCCCEEEEEECCCCcEEEEEeCCCCC---cEEEEEEECCCCCEEEEEc-CCcEEEEEC
Confidence 0000122233466666 457877776544322 344443 44 455555443 567777665
No 273
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.76 E-value=0.028 Score=52.86 Aligned_cols=249 Identities=14% Similarity=0.090 Sum_probs=119.0
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe--CCceEE-EEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC--cEEEeee
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSY 154 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~-~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g--~~~l~~~ 154 (372)
..+++++ +..++++..+|.|..++ +++... +........ .+.+++ ..++++..+..+..++ .++ ...+...
T Consensus 162 v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 162 VWSSQMR-DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE-KRVVSGSRDATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEET-TEEEEEETTSEEEEEESSSCCEEEEEECC
T ss_pred EEEEEec-CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEE-EEEecC-CEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 3445565 45777777777777777 654333 322223333 666653 3455554444455555 444 2222111
Q ss_pred cCC---cccccccceEEccCCcEEEEeCCCC-----CCCcc-c-------ccccccccCCCeEEEEeCCCCeEEEEeCCc
Q 017371 155 VNG---SKLRFANDVVEASDGSLYFTVSSSK-----YLPHE-Y-------CLDILEGKPHGQLLKYDPSSNITTLVADGF 218 (372)
Q Consensus 155 ~~~---~~~~~~~~l~~d~dG~i~vtd~~~~-----~~~~~-~-------~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~ 218 (372)
... ..+..-.-++...||.|.+-|.... +..+. . ...+..+..++.|..+|..+++......+.
T Consensus 239 ~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 318 (445)
T 2ovr_B 239 VAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 318 (445)
T ss_dssp SSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCC
T ss_pred cccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCC
Confidence 000 0000000111223444444432110 00000 0 001122345677888888777655444332
Q ss_pred cCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeecc--CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcc
Q 017371 219 YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAE--NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSS 296 (372)
Q Consensus 219 ~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~--~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~ 296 (372)
.. .-.++..+++.++.+ ..++.|..+++...+ ....+.. ...+....+..+ +++.++...
T Consensus 319 ~~-~v~~~~~~~~~l~~~-~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~------------ 380 (445)
T 2ovr_B 319 QS-LTSGMELKDNILVSG-NADSTVKIWDIKTGQ--CLQTLQGPNKHQSAVTCLQFN--KNFVITSSD------------ 380 (445)
T ss_dssp CS-CEEEEEEETTEEEEE-ETTSCEEEEETTTCC--EEEEECSTTSCSSCEEEEEEC--SSEEEEEET------------
T ss_pred cc-cEEEEEEeCCEEEEE-eCCCeEEEEECCCCc--EEEEEccCCCCCCCEEEEEEC--CCEEEEEeC------------
Confidence 22 223455567755544 456678888875432 1222221 122223445554 566655554
Q ss_pred hhHHHHHHhcCccccccccCCCceEEEEEC-CCCcEEEEEECCC-CCeeccceeeEEECCE--EEEEeCCCC---eEEEE
Q 017371 297 KLIKHVLAAYPKLFSQFITLGGGAHLIHVA-EDGTIIRNLVDPT-GQLMSFVTSGLQVDNH--LYVISLTSN---FIGKV 369 (372)
Q Consensus 297 ~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~-g~~~~~~t~~~~~~g~--L~igs~~~~---~i~~~ 369 (372)
.+.|..++ .+|+.+..+.... +.....+.++....+. |..|+..+. +|.++
T Consensus 381 ----------------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~ 438 (445)
T 2ovr_B 381 ----------------------DGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 438 (445)
T ss_dssp ----------------------TSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEE
T ss_pred ----------------------CCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEE
Confidence 46777777 4588887773221 2223357777776433 344554443 58888
Q ss_pred eCC
Q 017371 370 QLS 372 (372)
Q Consensus 370 ~~~ 372 (372)
+++
T Consensus 439 df~ 441 (445)
T 2ovr_B 439 DFD 441 (445)
T ss_dssp ECC
T ss_pred ECC
Confidence 764
No 274
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.76 E-value=0.014 Score=53.02 Aligned_cols=180 Identities=12% Similarity=0.126 Sum_probs=99.7
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe-CC-ceEEEEecC---CCcccCeEEcCCCCEEEEeCCCcEEEEcCCC--cEEEe
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ-DG-TWVNWKFID---SQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENFL 152 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~-~g-~~~~~~~~~---~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g--~~~l~ 152 (372)
...+|++.+++.+|+....|.|++-. .| .++...... ..++.++++++ +++|++....++++-...| .+.+.
T Consensus 37 ~~~~v~~~~~~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~ 115 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQIP 115 (327)
T ss_dssp CEEEEEESSSSCEEEEETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEEESSTTSSCEECC
T ss_pred cEEEEEECCCCcEEEEcCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEEECCCCCCceECc
Confidence 45567777777888877788888776 34 455543221 22333888875 7888876444455544444 44432
Q ss_pred eecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCcc-CcceEEEecCCC
Q 017371 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY-FANGVALSRDED 231 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~-~~~gi~~~~dg~ 231 (372)
.... .+ ..+..|++.+++++|+.. ..+.|++-+-.....+.+..... ...+++++++++
T Consensus 116 ~~~~-~~-~~~~~i~~~~~~~~~~~~------------------~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~ 175 (327)
T 2xbg_A 116 LDPK-LP-GSPRLIKALGNGSAEMIT------------------NVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGE 175 (327)
T ss_dssp CCTT-CS-SCEEEEEEEETTEEEEEE------------------TTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSC
T ss_pred cccC-CC-CCeEEEEEECCCCEEEEe------------------CCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCc
Confidence 2110 00 124567777788888753 24567776433345555543321 224677888876
Q ss_pred EEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 232 YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 232 ~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
+|+... ...+++-+-.+...-+ ......+.....++++++|++|++...
T Consensus 176 -~~~~g~-~G~~~~S~d~gG~tW~--~~~~~~~~~~~~~~~~~~g~~~~~~~~ 224 (327)
T 2xbg_A 176 -YVAVSS-RGSFYSTWEPGQTAWE--PHNRTTSRRLHNMGFTPDGRLWMIVNG 224 (327)
T ss_dssp -EEEEET-TSSEEEEECTTCSSCE--EEECCSSSCEEEEEECTTSCEEEEETT
T ss_pred -EEEEEC-CCcEEEEeCCCCCcee--ECCCCCCCccceeEECCCCCEEEEeCC
Confidence 444443 3457765533222111 111112223456778899999987754
No 275
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.73 E-value=0.0029 Score=57.34 Aligned_cols=201 Identities=11% Similarity=0.064 Sum_probs=108.8
Q ss_pred CCCccEEEcCCCc-EEEEecCCeEEEEe--CCceEEEEecCCCcccCeEE--cCCCCEEEEeC-CCcEEEEc-CCC--cE
Q 017371 79 NHPEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTS--TKEGHLIICDN-ANGLHKVS-EDG--VE 149 (372)
Q Consensus 79 ~~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~--d~dG~l~v~~~-~~gv~~~~-~~g--~~ 149 (372)
....++++.++|. |++++.+|.|..|+ +++............ .+++ .++|+++++.. ...+..++ .++ ..
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 165 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM 165 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEE
Confidence 3566789998885 66667899999999 555544444344455 8888 88887555544 34577777 555 44
Q ss_pred EEeeecCC--cccccccceEEccCCcEEEEeCCCCCC----------Ccccc-----------cccccccCCCeEEEEeC
Q 017371 150 NFLSYVNG--SKLRFANDVVEASDGSLYFTVSSSKYL----------PHEYC-----------LDILEGKPHGQLLKYDP 206 (372)
Q Consensus 150 ~l~~~~~~--~~~~~~~~l~~d~dG~i~vtd~~~~~~----------~~~~~-----------~~~~~~~~~g~v~~~d~ 206 (372)
.+...... .......-+....++.+.+-+....-. ..... ..+..+..++.|..+|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 166 VLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp EEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEES
T ss_pred EEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEec
Confidence 33221100 001111223333455555544321100 00000 00334445677777776
Q ss_pred CCCeE---EEEeCCcc-------------CcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCcee
Q 017371 207 SSNIT---TLVADGFY-------------FANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNI 270 (372)
Q Consensus 207 ~t~~~---~~~~~~~~-------------~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i 270 (372)
.+... ........ ....++++|+++.++.+. .++.|..+++...+ ....+. ...+....+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~--~~~~~~-~~~~~v~~~ 321 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKDART--KLKTSE-QLDQPISAC 321 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTE--EEEECC-CCSSCEEEE
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECCCCc--EEEEec-CCCCCceEE
Confidence 54311 11111111 356789999998666554 46678888876431 112222 223446779
Q ss_pred EEcCCCCEEEEEec
Q 017371 271 NLAPDGTFWIAIIK 284 (372)
Q Consensus 271 ~~d~~G~lwva~~~ 284 (372)
++.++|.+.++...
T Consensus 322 ~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 322 CFNHNGNIFAYASS 335 (368)
T ss_dssp EECTTSSCEEEEEC
T ss_pred EECCCCCeEEEEec
Confidence 99999976666543
No 276
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.72 E-value=0.0023 Score=54.45 Aligned_cols=141 Identities=12% Similarity=0.046 Sum_probs=79.8
Q ss_pred CcccCeEEcCCCCEEEEeCCCcEEEEc-CCC-cEEEe---eecCCcccccccceEEccCCcEEEEeCCCCCCCccccccc
Q 017371 118 QTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFL---SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDI 192 (372)
Q Consensus 118 ~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g-~~~l~---~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~ 192 (372)
... .++++|+|.||.+. ...|++++ .++ ...+. ..+....-+.-..+.+|++|.||.+
T Consensus 42 ~~~-~laf~P~G~LYaV~-~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--------------- 104 (236)
T 1tl2_A 42 NFK-FLFLSPGGELYGVL-NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--------------- 104 (236)
T ss_dssp TCS-EEEECTTSCEEEEE-TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE---------------
T ss_pred cce-eEEECCCccEEEEe-CCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe---------------
Confidence 334 89999999999983 44599999 452 11111 1111001122457899999999996
Q ss_pred ccccCCCeEEEEeCCC-CeE------EEEe-CCccCcceEEEecCCCEEEEEeCCCCeEEEEEccCCC-Cc---ceeeec
Q 017371 193 LEGKPHGQLLKYDPSS-NIT------TLVA-DGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKGER-KG---KLETFA 260 (372)
Q Consensus 193 ~~~~~~g~v~~~d~~t-~~~------~~~~-~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~-~~---~~~~~~ 260 (372)
.+|.|||+++-+ +.- ..+- .+...-.-+.++|+|. ||... +.++++-...... .. ....+.
T Consensus 105 ----~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g 177 (236)
T 1tl2_A 105 ----SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQDNWLARATKIG 177 (236)
T ss_dssp ----ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTTCCHHHHCEEEE
T ss_pred ----CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCCcccccccceec
Confidence 348999999733 111 1122 2333346788999997 88887 5567664332110 00 011111
Q ss_pred cCCCCCCceeEEcCCCCEEEEE
Q 017371 261 ENLPGAPDNINLAPDGTFWIAI 282 (372)
Q Consensus 261 ~~~~g~p~~i~~d~~G~lwva~ 282 (372)
...-..-.-+..+++|+||..+
T Consensus 178 ~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 178 QGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp SSSGGGEEEEEECTTSCEEEEE
T ss_pred cCCcceEEEEEECCCCcEEEEe
Confidence 0000011125589999999888
No 277
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.0018 Score=63.22 Aligned_cols=149 Identities=11% Similarity=-0.014 Sum_probs=92.1
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe--CCc-e-EEEEecCCCcccCe--EEcCCC-CEEEEeCC-CcEEEEc-CCC--c
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ--DGT-W-VNWKFIDSQTLVGL--TSTKEG-HLIICDNA-NGLHKVS-EDG--V 148 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~--~g~-~-~~~~~~~~~p~~gl--~~d~dG-~l~v~~~~-~gv~~~~-~~g--~ 148 (372)
...++++.+++.|.+|+.||.|..|| ++. . ..+..-.+... ++ ++.++| +++++... .-+..+| .++ .
T Consensus 268 ~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~-sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~ 346 (524)
T 2j04_B 268 LITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL-SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATT 346 (524)
T ss_dssp CEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE-EEEEECCTTSCCEEEEEETTSEEEEECGGGHHHH
T ss_pred CEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEE-EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcc
Confidence 34567887777888888999999999 343 2 22322223344 77 456777 77666544 4466777 555 3
Q ss_pred EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeE-EEEeCCccCcceEEEe
Q 017371 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALS 227 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~-~~~~~~~~~~~gi~~~ 227 (372)
..+.....+ ..+..+++.|+|..+++-+ ..+.|..+|..++.. ..+.......+.++++
T Consensus 347 ~~~~~~~~~---~~v~~v~fsp~~~~l~s~~-----------------~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 347 KTTVSRFRG---SNLVPVVYCPQIYSYIYSD-----------------GASSLRAVPSRAAFAVHPLVSRETTITAIGVS 406 (524)
T ss_dssp CEEEEECSC---CSCCCEEEETTTTEEEEEC-----------------SSSEEEEEETTCTTCCEEEEECSSCEEEEECC
T ss_pred ccccccccc---CcccceEeCCCcCeEEEeC-----------------CCCcEEEEECcccccceeeecCCCceEEEEeC
Confidence 333221111 1246789999998877633 355677788766553 2233233345689999
Q ss_pred cCCCEEEEEeCCCCeEEEEEccC
Q 017371 228 RDEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 228 ~dg~~l~v~~~~~~~i~~~~~~g 250 (372)
|+|+.| ++.+.++.|..+++.+
T Consensus 407 p~g~~l-~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 407 RLHPMV-LAGSADGSLIITNAAR 428 (524)
T ss_dssp SSCCBC-EEEETTTEEECCBSCS
T ss_pred CCCCeE-EEEECCCEEEEEechH
Confidence 999854 5555667777776643
No 278
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.68 E-value=0.011 Score=53.04 Aligned_cols=183 Identities=13% Similarity=0.067 Sum_probs=95.2
Q ss_pred CCccEEEcCCCc-EEEEecCCeEEEEe--CCce---EEEEecCCCcccCeEEcC--CCCEEEE-eCCCcEEEEc-CCC-c
Q 017371 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTK--EGHLIIC-DNANGLHKVS-EDG-V 148 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~---~~~~~~~~~p~~gl~~d~--dG~l~v~-~~~~gv~~~~-~~g-~ 148 (372)
...+++++++|. |..+..|+.|..|+ +++. ..+....+... .+++.+ +|+++++ ..+..+..++ .++ .
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~-~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW-QVAWAHPMYGNILASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEE-EEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEE-EEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence 456789998886 45556899999888 5542 22222223445 888864 3665554 4445577788 555 3
Q ss_pred EEEeeecCCcccccccceEEccC--CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe-EEEEe--CC-ccCcc
Q 017371 149 ENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-TTLVA--DG-FYFAN 222 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~d--G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~-~~~~~--~~-~~~~~ 222 (372)
..... ..+. ...++.+++.++ |.+.++-+ .++.|..+|..++. .+... .+ ...-+
T Consensus 94 ~~~~~-~~~h-~~~V~~v~~~p~~~g~~lasgs-----------------~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 94 EKSHE-HAGH-DSSVNSVCWAPHDYGLILACGS-----------------SDGAISLLTYTGEGQWEVKKINNAHTIGCN 154 (316)
T ss_dssp CEEEE-ECCC-SSCCCEEEECCTTTCSCEEEEC-----------------SSSCEEEEEECSSSCEEECCBTTSSSSCBC
T ss_pred eEEEE-ccCC-CCceEEEEECCCCCCcEEEEEc-----------------CCCCEEEEecCCCCCcceeeeeccccCCcc
Confidence 22221 1111 135678899887 66665532 45666666655432 22111 11 11234
Q ss_pred eEEEecCC----------------CEEEEEeCCCCeEEEEEccCCCC-cceeeeccCCCCCCceeEEcCCC----CEEEE
Q 017371 223 GVALSRDE----------------DYVVVCESWKFRCRKYWLKGERK-GKLETFAENLPGAPDNINLAPDG----TFWIA 281 (372)
Q Consensus 223 gi~~~~dg----------------~~l~v~~~~~~~i~~~~~~g~~~-~~~~~~~~~~~g~p~~i~~d~~G----~lwva 281 (372)
.++++|+. ..++++...+..|..+++..... .....+. ...+....+++.+++ ++.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~~~~las 233 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIGLPTSTIAS 233 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSSCSCCEEEE
T ss_pred eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCCCCCceEEE
Confidence 56777762 12455555556666666643211 1111111 122334567777765 44444
Q ss_pred Ee
Q 017371 282 II 283 (372)
Q Consensus 282 ~~ 283 (372)
..
T Consensus 234 ~s 235 (316)
T 3bg1_A 234 CS 235 (316)
T ss_dssp EE
T ss_pred Ec
Confidence 43
No 279
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.67 E-value=0.027 Score=50.08 Aligned_cols=111 Identities=8% Similarity=-0.078 Sum_probs=65.5
Q ss_pred CeEEcCCCCEEEEeCCCc-EEEEc-CCC--cEEEeeecCCcccccccceEEcc--CCcEEEEeCCCCCCCcccccccccc
Q 017371 122 GLTSTKEGHLIICDNANG-LHKVS-EDG--VENFLSYVNGSKLRFANDVVEAS--DGSLYFTVSSSKYLPHEYCLDILEG 195 (372)
Q Consensus 122 gl~~d~dG~l~v~~~~~g-v~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~--dG~i~vtd~~~~~~~~~~~~~~~~~ 195 (372)
.+++.++|+++++....| +..++ .++ ...+.....+. ...+..+++.+ +|++.++-.
T Consensus 16 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~d~~~l~s~~---------------- 78 (351)
T 3f3f_A 16 DVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH-DSSIVAIDWASPEYGRIIASAS---------------- 78 (351)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC-SSCEEEEEECCGGGCSEEEEEE----------------
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccC-CCcEEEEEEcCCCCCCEEEEEc----------------
Confidence 899999998666544444 66666 433 22222221211 13466788887 577666522
Q ss_pred cCCCeEEEEeCCCCe----------EEEEeCCccCcceEEEecC--CCEEEEEeCCCCeEEEEEccCC
Q 017371 196 KPHGQLLKYDPSSNI----------TTLVADGFYFANGVALSRD--EDYVVVCESWKFRCRKYWLKGE 251 (372)
Q Consensus 196 ~~~g~v~~~d~~t~~----------~~~~~~~~~~~~gi~~~~d--g~~l~v~~~~~~~i~~~~~~g~ 251 (372)
.++.|..+|..+++ ...+.........++++++ ++.++.+. .++.|..+++...
T Consensus 79 -~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 79 -YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG-NDGILRLYDALEP 144 (351)
T ss_dssp -TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTCEEEEEECSST
T ss_pred -CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec-CCCcEEEecCCCh
Confidence 45667777766542 2222222334467899999 88665554 5667888887654
No 280
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.67 E-value=0.028 Score=55.43 Aligned_cols=42 Identities=12% Similarity=0.120 Sum_probs=29.9
Q ss_pred ceEEEEECC-CCcEEEEEECCCCCeeccceeeE-EECCEEEEEeCCC
Q 017371 319 GAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGL-QVDNHLYVISLTS 363 (372)
Q Consensus 319 ~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~-~~~g~L~igs~~~ 363 (372)
.+.+..+|. +|+++..+..+.+.. . +-+. +.+|++|++...+
T Consensus 506 dg~l~A~D~~tG~~lW~~~~~~g~~-a--~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 506 DGYFKAFDAKSGKELWKFQTGSGIV-S--PPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCC-S--CCEEEEETTEEEEEEEEC
T ss_pred CCcEEEEECCCCCEEEEecCCCCcc-c--CceEEEECCEEEEEEEcc
Confidence 478999994 699999999876642 1 2223 3689999986543
No 281
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.67 E-value=0.018 Score=52.32 Aligned_cols=175 Identities=7% Similarity=0.040 Sum_probs=96.8
Q ss_pred ccEEEcCCCcEEEEecCCeEEEEeC-C-ceEEEEec---CCCcccCeEEcCCCCEEEEeCCCcEEEEcCCC--cEEEeee
Q 017371 82 EDASMDKNGVIYTATRDGWIKRLQD-G-TWVNWKFI---DSQTLVGLTSTKEGHLIICDNANGLHKVSEDG--VENFLSY 154 (372)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~i~~~~~-g-~~~~~~~~---~~~p~~gl~~d~dG~l~v~~~~~gv~~~~~~g--~~~l~~~ 154 (372)
.+|++++ +.+|++...|.|++-.+ | .++..... .+.+. ++++.+++++|++....++++-...| .+.+...
T Consensus 83 ~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~ 160 (327)
T 2xbg_A 83 NSVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQE 160 (327)
T ss_dssp EEEEEET-TEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEEEECS
T ss_pred EEEEecC-CeEEEEECCCeEEEECCCCCCceECccccCCCCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecC
Confidence 3577775 68888777788888663 4 35544322 13456 77777788888887544566655445 4444322
Q ss_pred cCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCC-CCeEEEEeCC-ccCcceEEEecCCCE
Q 017371 155 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPS-SNITTLVADG-FYFANGVALSRDEDY 232 (372)
Q Consensus 155 ~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~-t~~~~~~~~~-~~~~~gi~~~~dg~~ 232 (372)
.. .....++++++|++|+.. ..|.+++-+-. ....+.+... -.....++++++++
T Consensus 161 ~~----~~~~~~~~~~~~~~~~~g------------------~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~- 217 (327)
T 2xbg_A 161 AI----GVMRNLNRSPSGEYVAVS------------------SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR- 217 (327)
T ss_dssp CC----CCEEEEEECTTSCEEEEE------------------TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-
T ss_pred CC----cceEEEEEcCCCcEEEEE------------------CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-
Confidence 11 234578888889888753 24567776432 2334443221 12234577788886
Q ss_pred EEEEeCCCCeEEEEEccCCCCcceeeeccC-CCC--CCceeEEcCCCCEEEEEec
Q 017371 233 VVVCESWKFRCRKYWLKGERKGKLETFAEN-LPG--APDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 233 l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~-~~g--~p~~i~~d~~G~lwva~~~ 284 (372)
+|++.. ...+++...++.+. .+..... ++. ....+..++++.+|++...
T Consensus 218 ~~~~~~-~G~~~~s~~D~G~t--W~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~ 269 (327)
T 2xbg_A 218 LWMIVN-GGKIAFSDPDNSEN--WGELLSPLRRNSVGFLDLAYRTPNEVWLAGGA 269 (327)
T ss_dssp EEEEET-TTEEEEEETTEEEE--ECCCBCTTSSCCSCEEEEEESSSSCEEEEEST
T ss_pred EEEEeC-CceEEEecCCCCCe--eEeccCCcccCCcceEEEEecCCCEEEEEeCC
Confidence 666554 34455543332211 1111100 111 1234667788899998654
No 282
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.65 E-value=0.017 Score=58.32 Aligned_cols=42 Identities=19% Similarity=0.303 Sum_probs=29.9
Q ss_pred ceEEEEEC-CCCcEEEEEECCCCCeeccceeeE-EECCEEEEEeCCC
Q 017371 319 GAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGL-QVDNHLYVISLTS 363 (372)
Q Consensus 319 ~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~-~~~g~L~igs~~~ 363 (372)
.+.+..+| .+|+++..+..+.+..-. -+. ..+|+.|++...+
T Consensus 495 dg~l~a~D~~tG~~lw~~~~~~~~~~~---p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 495 DGRVIAYAADTGEKLWEQPAASGVMAA---PVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSC---CEEEEETTEEEEEEEEC
T ss_pred CCcEEEEECCCCccceeeeCCCCcccC---ceEEEECCEEEEEEEec
Confidence 57899999 469999999887664222 233 4689999986633
No 283
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.63 E-value=0.037 Score=50.60 Aligned_cols=199 Identities=11% Similarity=0.023 Sum_probs=101.5
Q ss_pred CCCccEEEcCCCcEEEEecCCeEEEEe-C-CceEEEEecCCCcccCeEEcCCCCEE-EEeCC-CcEEEEc-CCC--cEEE
Q 017371 79 NHPEDASMDKNGVIYTATRDGWIKRLQ-D-GTWVNWKFIDSQTLVGLTSTKEGHLI-ICDNA-NGLHKVS-EDG--VENF 151 (372)
Q Consensus 79 ~~p~~i~~d~~G~l~v~~~~g~i~~~~-~-g~~~~~~~~~~~p~~gl~~d~dG~l~-v~~~~-~gv~~~~-~~g--~~~l 151 (372)
....++++.++|.+.++..+..+..|+ + ++... ........ .+.+.+++++. ++... ..+..+| .++ ...+
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~ 97 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIM-SQEMRHLS-KVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI 97 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEE-EEECSCCC-EEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCEEEEEecCCcceee-eeecCCeE-EEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE
Confidence 356789999999866655444576777 3 32222 12112233 55666666544 33333 3577777 566 3333
Q ss_pred eeecCCc--cc-ccccceEEccCCcEEEEeCCCC-CCCccc-----------cccccc-ccCCCeEEEEeCCCCe-----
Q 017371 152 LSYVNGS--KL-RFANDVVEASDGSLYFTVSSSK-YLPHEY-----------CLDILE-GKPHGQLLKYDPSSNI----- 210 (372)
Q Consensus 152 ~~~~~~~--~~-~~~~~l~~d~dG~i~vtd~~~~-~~~~~~-----------~~~~~~-~~~~g~v~~~d~~t~~----- 210 (372)
.. ... .. -.++.+.+..++.|++-|.... -..... ...... +...|.|..+|..+++
T Consensus 98 ~~--~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~ 175 (355)
T 3vu4_A 98 KV--DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQ 175 (355)
T ss_dssp EC--SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-------
T ss_pred EC--CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccc
Confidence 21 110 00 0122333334556666543321 000000 000111 4567788888887654
Q ss_pred ------------EEEEeCCccCcceEEEecCCCEEEEEeCCCCe-EEEEEccCCCCcceeeeccC-CCCCCceeEEcCCC
Q 017371 211 ------------TTLVADGFYFANGVALSRDEDYVVVCESWKFR-CRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDG 276 (372)
Q Consensus 211 ------------~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~-i~~~~~~g~~~~~~~~~~~~-~~g~p~~i~~d~~G 276 (372)
...+...-.....++++|||+.|..+ +.+.. |..+++...+ ....+... ..+....++++++|
T Consensus 176 ~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~-s~d~~~v~iwd~~~~~--~~~~~~~g~h~~~v~~~~~s~~~ 252 (355)
T 3vu4_A 176 DQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC-SQDGTIIRVFKTEDGV--LVREFRRGLDRADVVDMKWSTDG 252 (355)
T ss_dssp -----------CCEEECCCSSCEEEEEECTTSSEEEEE-ETTCSEEEEEETTTCC--EEEEEECTTCCSCEEEEEECTTS
T ss_pred cccccccccCcccEEEEccCCceEEEEECCCCCEEEEE-eCCCCEEEEEECCCCc--EEEEEEcCCCCCcEEEEEECCCC
Confidence 23332223334678999999855544 45565 7777775432 12233211 33446678899999
Q ss_pred CEEEEEec
Q 017371 277 TFWIAIIK 284 (372)
Q Consensus 277 ~lwva~~~ 284 (372)
++.++...
T Consensus 253 ~~l~s~s~ 260 (355)
T 3vu4_A 253 SKLAVVSD 260 (355)
T ss_dssp CEEEEEET
T ss_pred CEEEEEEC
Confidence 87776654
No 284
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.63 E-value=0.018 Score=57.86 Aligned_cols=43 Identities=9% Similarity=0.248 Sum_probs=28.9
Q ss_pred ceEEEEECC-CCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCC
Q 017371 319 GAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTS 363 (372)
Q Consensus 319 ~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~ 363 (372)
.+.+..+|. +|+++..+..+.+.....+ ....+|++|++...+
T Consensus 478 dg~l~a~d~~tG~~l~~~~~~~~~~~~p~--~~~~~G~~yva~~~G 521 (668)
T 1kv9_A 478 AGQMHAYSADKGEALWQFEAQSGIVAAPM--TFELAGRQYVAIMAG 521 (668)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEEC
T ss_pred cccchhhhhhcChhheEecCCCCcccCce--EEEECCEEEEEEEec
Confidence 468999985 5999999988755321221 224689999876543
No 285
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.61 E-value=0.048 Score=51.22 Aligned_cols=242 Identities=14% Similarity=0.095 Sum_probs=128.9
Q ss_pred ccEEEcCCCcEEEEecCCeEEEEe--CCceEE-EEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC--cEEEeeec
Q 017371 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTWVN-WKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG--VENFLSYV 155 (372)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~-~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g--~~~l~~~~ 155 (372)
.++..+ +..|++++.+|.|..|+ +++... +....+... .++++ ++.++.+..+..+..++ .++ ...+....
T Consensus 123 ~~~~~~-g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~ 199 (445)
T 2ovr_B 123 TCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW-SSQMR-DNIIISGSTDRTLKVWNAETGECIHTLYGHT 199 (445)
T ss_dssp EEEEEE-TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEE-EEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred EEEEEc-CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEE-EEEec-CCEEEEEeCCCeEEEEECCcCcEEEEECCCC
Confidence 367778 46899999999999999 776443 333333445 78877 34455555545566677 666 33332111
Q ss_pred CC---cccccccceE-EccCCcEEEEeCCCCCCC-----c-cc-------ccccccccCCCeEEEEeCCCCeEEEEeCCc
Q 017371 156 NG---SKLRFANDVV-EASDGSLYFTVSSSKYLP-----H-EY-------CLDILEGKPHGQLLKYDPSSNITTLVADGF 218 (372)
Q Consensus 156 ~~---~~~~~~~~l~-~d~dG~i~vtd~~~~~~~-----~-~~-------~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~ 218 (372)
.. ..+. .+.++ ...||.|.+-|....-.. + .. ...+..+..++.|..+|..+++......+.
T Consensus 200 ~~v~~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 278 (445)
T 2ovr_B 200 STVRCMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGH 278 (445)
T ss_dssp SCEEEEEEE-TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCC
T ss_pred CcEEEEEec-CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCC
Confidence 10 0011 11222 335677776654321000 0 00 011233445677888887766654444332
Q ss_pred cC-cceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcch
Q 017371 219 YF-ANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSK 297 (372)
Q Consensus 219 ~~-~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~ 297 (372)
.. ...+++ +++.++.+. .++.|..+++...+ ....+. ........+.. ++++.++...
T Consensus 279 ~~~v~~~~~--~~~~l~~~~-~d~~i~i~d~~~~~--~~~~~~-~~~~~v~~~~~--~~~~l~~~~~------------- 337 (445)
T 2ovr_B 279 TNRVYSLQF--DGIHVVSGS-LDTSIRVWDVETGN--CIHTLT-GHQSLTSGMEL--KDNILVSGNA------------- 337 (445)
T ss_dssp SSCEEEEEE--CSSEEEEEE-TTSCEEEEETTTCC--EEEEEC-CCCSCEEEEEE--ETTEEEEEET-------------
T ss_pred CCceEEEEE--CCCEEEEEe-CCCeEEEEECCCCC--EEEEEc-CCcccEEEEEE--eCCEEEEEeC-------------
Confidence 21 223444 777666555 46678888876432 112221 12222333444 4555555544
Q ss_pred hHHHHHHhcCccccccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 298 LIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 298 ~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|..+|. +++.+..+..+.+. ...++++..+++.|..|+ ....|.++++
T Consensus 338 ---------------------dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~s~~-~dg~v~iwd~ 389 (445)
T 2ovr_B 338 ---------------------DSTVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFNKNFVITSS-DDGTVKLWDL 389 (445)
T ss_dssp ---------------------TSCEEEEETTTCCEEEEECSTTSC-SSCEEEEEECSSEEEEEE-TTSEEEEEET
T ss_pred ---------------------CCeEEEEECCCCcEEEEEccCCCC-CCCEEEEEECCCEEEEEe-CCCeEEEEEC
Confidence 356777773 67888877654322 345677777666666666 4466776664
No 286
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.59 E-value=0.0076 Score=60.60 Aligned_cols=111 Identities=13% Similarity=0.182 Sum_probs=67.3
Q ss_pred CCcEEEEecCCeEEEEe--CCceEEEEecCCC-------------cccCeEEcCCCCEEEEeCCCcEEEEc-CCCcEEEe
Q 017371 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ-------------TLVGLTSTKEGHLIICDNANGLHKVS-EDGVENFL 152 (372)
Q Consensus 89 ~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~-------------p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g~~~l~ 152 (372)
+|.||+++.++.|+.+| +|+.. |...... .. +++++ ++++|++.....|+.+| .+|.....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~-W~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKEL-WRYDPEVAKVKARTSCCDAVNR-GVALW-GDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEE-EEECCCCCGGGGGGCTTCSCCC-CCEEE-BTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhc-eEECCCCCccccccccccCCcc-ceEEE-CCEEEEEcCCCEEEEEECCCCCEeee
Confidence 68999999999999999 67654 3321111 12 55665 68899987666799999 78833322
Q ss_pred eecCCc--ccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe
Q 017371 153 SYVNGS--KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA 215 (372)
Q Consensus 153 ~~~~~~--~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~ 215 (372)
...... .......-.+ .+|.+|++..... ....|.|+.+|.+||+..+..
T Consensus 143 ~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~------------~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRV-VKGKVIIGNGGAE------------YGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EECSCTTSSCBCCSCCEE-ETTEEEECCBCTT------------TCCBCEEEEEETTTCCEEEEE
T ss_pred eccCCCCCcceecCCCEE-ECCEEEEeCCCCC------------cCCCCEEEEEECCCCcEEEEe
Confidence 221110 0011111122 3678888643211 113578999999999877644
No 287
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.58 E-value=0.021 Score=57.60 Aligned_cols=178 Identities=8% Similarity=0.034 Sum_probs=90.9
Q ss_pred ccEEEcCCCc--EEEEecCC----eEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCCC-------------c
Q 017371 82 EDASMDKNGV--IYTATRDG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNAN-------------G 139 (372)
Q Consensus 82 ~~i~~d~~G~--l~v~~~~g----~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~~-------------g 139 (372)
.++.+.+||+ +|..+..| .|+.++ +|+............ ++++. ||+ |+++.... .
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~-~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFS-GISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESC-CCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceec-cEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 3457778885 33333333 466677 565433211111123 67787 775 66654331 2
Q ss_pred EEEEc-CCC--cEEEeeecCC-cccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC--eEE
Q 017371 140 LHKVS-EDG--VENFLSYVNG-SKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--ITT 212 (372)
Q Consensus 140 v~~~~-~~g--~~~l~~~~~~-~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~--~~~ 212 (372)
|++.+ .++ ...+...... .. ....++.+++||+ |+++..+ ......|+.+|.+++ +.+
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~-~~~~~~~~SpDg~~l~~~~~~--------------~~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQH-HRYVGATVTEDDRFLLISAAN--------------STSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGC-CSEEEEEECTTSCEEEEEEES--------------SSSCCEEEEEETTSTTCCCE
T ss_pred EEEEECCCCcccceEEEecCCCCC-eEEEEEEEcCCCCEEEEEEcc--------------CCCCcEEEEEECCCCCCceE
Confidence 66665 333 1122211111 11 1234677889996 4454321 112357999987655 555
Q ss_pred EEeCCccCcceEEEecCCCEEEEEeCC---CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEE
Q 017371 213 LVADGFYFANGVALSRDEDYVVVCESW---KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWI 280 (372)
Q Consensus 213 ~~~~~~~~~~gi~~~~dg~~l~v~~~~---~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwv 280 (372)
.+......- --.++++|+.+|+.... +.+|+++++++......+.+...... .+.++.+|+..+
T Consensus 275 ~l~~~~~~~-~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~---~~~~s~~g~~lv 341 (693)
T 3iuj_A 275 TVQGDLDAD-VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQ---VLTVHSGSGYLF 341 (693)
T ss_dssp EEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS---CEEEEEETTEEE
T ss_pred EEeCCCCce-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCC---EEEEEEECCEEE
Confidence 554433221 12267888888877543 36899999986543333444433222 225555565333
No 288
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.58 E-value=0.03 Score=52.53 Aligned_cols=173 Identities=13% Similarity=0.069 Sum_probs=82.6
Q ss_pred CccEEEcCCCcEEEEecCCeEEEEe--CCceE-EEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC-cEEEeeec
Q 017371 81 PEDASMDKNGVIYTATRDGWIKRLQ--DGTWV-NWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYV 155 (372)
Q Consensus 81 p~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~-~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g-~~~l~~~~ 155 (372)
..++.++ +..|++++.+|.|..++ +++.. .+....+... .++++ ++.++.+..+..+..++ .++ ........
T Consensus 176 v~~l~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 252 (435)
T 1p22_A 176 VLCLQYD-ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL-HLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRRVL 252 (435)
T ss_dssp EEEEECC-SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE-EEECC-TTEEEEEETTSCEEEEECSSSSCCEEEEEE
T ss_pred EEEEEEC-CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEE-EEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeEe
Confidence 3445552 23556666778787777 44432 2222222333 66664 23444444444466666 444 21111111
Q ss_pred CCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCcc-CcceEEEecCCCEEE
Q 017371 156 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFY-FANGVALSRDEDYVV 234 (372)
Q Consensus 156 ~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~-~~~gi~~~~dg~~l~ 234 (372)
.+. ...+..+++ +|+..++ +..++.|..+|..+++......+.. ....+++ +++.++
T Consensus 253 ~~~-~~~v~~~~~--~~~~l~s-----------------~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 310 (435)
T 1p22_A 253 VGH-RAAVNVVDF--DDKYIVS-----------------ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVV 310 (435)
T ss_dssp CCC-SSCEEEEEE--ETTEEEE-----------------EETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEE
T ss_pred cCC-CCcEEEEEe--CCCEEEE-----------------EeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEE
Confidence 111 113344555 4444443 2256789999988776554433322 2223444 566555
Q ss_pred EEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 235 VCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 235 v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
.+ ..++.|..+++...+ ....+. ...+....+.+ +|++.++...
T Consensus 311 ~g-~~dg~i~iwd~~~~~--~~~~~~-~h~~~v~~~~~--~~~~l~sg~~ 354 (435)
T 1p22_A 311 SG-SSDNTIRLWDIECGA--CLRVLE-GHEELVRCIRF--DNKRIVSGAY 354 (435)
T ss_dssp EE-ETTSCEEEEETTTCC--EEEEEC-CCSSCEEEEEC--CSSEEEEEET
T ss_pred EE-eCCCeEEEEECCCCC--EEEEEe-CCcCcEEEEEe--cCCEEEEEeC
Confidence 44 456678888886432 112222 22222344555 5655555443
No 289
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.57 E-value=0.007 Score=54.76 Aligned_cols=136 Identities=10% Similarity=0.029 Sum_probs=75.2
Q ss_pred CCeEEEEe--CCceEEEEecCCCcccCeEEcCCCC-EEEEeCC-----CcEEEEc-CCC-cEEEeeecCCcccccccceE
Q 017371 98 DGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGH-LIICDNA-----NGLHKVS-EDG-VENFLSYVNGSKLRFANDVV 167 (372)
Q Consensus 98 ~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~-l~v~~~~-----~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~ 167 (372)
.+.|+.++ +++.+.+ .... .+++.|||+ |+++... ..|+.++ .+| ...+... + . +..++
T Consensus 42 ~~~l~~~d~~~~~~~~l----~~~~-~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~----~-~~~~~ 110 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI----ENAT-MPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-K----N-IRSLE 110 (347)
T ss_dssp EEEEEEEETTTCCEEEE----ESCE-EEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-S----E-EEEEE
T ss_pred cceEEEEeCCCCceEEc----ccCC-CeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-C----C-cccee
Confidence 45678888 4555544 3445 788999996 4433321 1378888 555 4443222 1 1 56788
Q ss_pred EccCCc-EEEEeCCCC----CC-Ccc--cccc--cccccCCCeEEEEeCCCCeE-EEEeCCccCcceEEEecCCCEEEEE
Q 017371 168 EASDGS-LYFTVSSSK----YL-PHE--YCLD--ILEGKPHGQLLKYDPSSNIT-TLVADGFYFANGVALSRDEDYVVVC 236 (372)
Q Consensus 168 ~d~dG~-i~vtd~~~~----~~-~~~--~~~~--~~~~~~~g~v~~~d~~t~~~-~~~~~~~~~~~gi~~~~dg~~l~v~ 236 (372)
+.+||+ |+++..... +. ... +..+ -........|+.+|.++++. +.+.. - ....++++||| .++.+
T Consensus 111 wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 111 WNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp ECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEE
T ss_pred ECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEE
Confidence 999995 666531100 00 000 0000 00001245799999988887 55443 2 56678999999 66666
Q ss_pred eCC--------CCeEEEEE
Q 017371 237 ESW--------KFRCRKYW 247 (372)
Q Consensus 237 ~~~--------~~~i~~~~ 247 (372)
... ...|+.++
T Consensus 188 ~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 188 PHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp ECCCSSCCSSCCEEEEEEE
T ss_pred ecccccccccccccEEEeC
Confidence 432 33677777
No 290
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.57 E-value=0.0084 Score=55.08 Aligned_cols=160 Identities=10% Similarity=0.021 Sum_probs=90.1
Q ss_pred cCCeEEEEe--CCceEEEEecCCCcccCeEEcC-CCC-EEEEeCC------CcEEEEc-CCC-cEEEeeecCCccccccc
Q 017371 97 RDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTK-EGH-LIICDNA------NGLHKVS-EDG-VENFLSYVNGSKLRFAN 164 (372)
Q Consensus 97 ~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~-dG~-l~v~~~~------~gv~~~~-~~g-~~~l~~~~~~~~~~~~~ 164 (372)
....|+.++ +++.+.+........ .+.+.+ +|+ |+++... ..|+.++ ..+ .+.+... .....+.
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~~~~~~-~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~~~ 241 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQDTAWLG-HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH---AEGESCT 241 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEESSCEE-EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC---CTTEEEE
T ss_pred CcceEEEEECCCCcEEeeccCCcccc-cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc---CCCcccc
Confidence 345688888 566655544334445 778888 675 5544322 2478888 334 4443221 1112455
Q ss_pred ceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEec-CCCEEEEEeC----
Q 017371 165 DVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSR-DEDYVVVCES---- 238 (372)
Q Consensus 165 ~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~-dg~~l~v~~~---- 238 (372)
.+++.+||+ |+++... .+...+.|+.+|.++++.+.+... ...+ +++++ ||+.++++..
T Consensus 242 ~~~~spdg~~l~~~~~~-------------~~~~~~~l~~~d~~~g~~~~l~~~-~~~~-~~~s~~dg~~l~~~~~~~p~ 306 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYF-------------KGQTDRVIYKANPETLENEEVMVM-PPCS-HLMSNFDGSLMVGDGCDAPV 306 (396)
T ss_dssp EEEECTTSSCEEEEEEE-------------TTTCCEEEEEECTTTCCEEEEEEC-CSEE-EEEECSSSSEEEEEECCC--
T ss_pred ceEECCCCCEEEEEecC-------------CCCccceEEEEECCCCCeEEeeeC-CCCC-CCccCCCCceEEEecCCcce
Confidence 678999996 5554210 011224599999988876665421 1122 78999 9996655431
Q ss_pred -----------CCCeEEEEEccCCCCcceeeeccCCCC----------CCceeEEcCCCCE
Q 017371 239 -----------WKFRCRKYWLKGERKGKLETFAENLPG----------APDNINLAPDGTF 278 (372)
Q Consensus 239 -----------~~~~i~~~~~~g~~~~~~~~~~~~~~g----------~p~~i~~d~~G~l 278 (372)
+...|+.+++++.+.. .+...... ....+.+++||+.
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 364 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAKSAQ---KLCKHSTSWDVLDGDRQITHPHPSFTPNDDG 364 (396)
T ss_dssp --------CCCCCCEEEEEETTTTBCC---EEEECCCCCCCBTTBSSTTCCCCEECTTSSE
T ss_pred eeccccccccCCCCcEEEEecccCceE---EccCCCCccccccccccCCCCCceEccCCCe
Confidence 3467999998765432 22211110 1345678888863
No 291
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.018 Score=53.89 Aligned_cols=149 Identities=11% Similarity=0.067 Sum_probs=85.9
Q ss_pred CCccEEEcCCCc-EEEEecCCeEEEEe-----CCceEEE---------Ee----cCCCcccCeE--EcCCCCEEEEeCC-
Q 017371 80 HPEDASMDKNGV-IYTATRDGWIKRLQ-----DGTWVNW---------KF----IDSQTLVGLT--STKEGHLIICDNA- 137 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~~g~i~~~~-----~g~~~~~---------~~----~~~~p~~gl~--~d~dG~l~v~~~~- 137 (372)
...++++.+++. |+++..+|.|..|+ .++.... .. ...... .+. +.+++.++++...
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAV-RMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEE-EEEEEECSSCEEEEEEETT
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCce-EEEEEEcCCCCEEEEEeCC
Confidence 466788988775 55666899888886 2222111 10 111222 333 4467766555444
Q ss_pred CcEEEEc-CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE
Q 017371 138 NGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 214 (372)
Q Consensus 138 ~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~ 214 (372)
..+..+| .++ ...+... .....+..++++++|+..++-. .++.|..+|..+++....
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~~-----------------~dg~i~iwd~~~~~~~~~ 251 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENS---PRHGAVSSICIDEECCVLILGT-----------------TRGIIDIWDIRFNVLIRS 251 (437)
T ss_dssp SEEEEEETTTCCEEEEEECC---GGGCCEEEEEECTTSCEEEEEE-----------------TTSCEEEEETTTTEEEEE
T ss_pred CeEEEEeCCCCeeeEEEccC---CCCCceEEEEECCCCCEEEEEc-----------------CCCeEEEEEcCCccEEEE
Confidence 4577777 555 3333221 0123567899999998777532 467899999887765443
Q ss_pred eC--CccCcceEEEe----cCCCEEEEEeCCCCeEEEEEccC
Q 017371 215 AD--GFYFANGVALS----RDEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 215 ~~--~~~~~~gi~~~----~dg~~l~v~~~~~~~i~~~~~~g 250 (372)
.. .......++++ +++. ++++.+.++.|..+++..
T Consensus 252 ~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 252 WSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp EBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTT
T ss_pred EecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCC
Confidence 32 22223456444 4554 555555566788888764
No 292
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.034 Score=50.17 Aligned_cols=143 Identities=12% Similarity=0.053 Sum_probs=76.1
Q ss_pred CeEEcCCCCEEEEeCCCcEEEEc-CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCC
Q 017371 122 GLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHG 199 (372)
Q Consensus 122 gl~~d~dG~l~v~~~~~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g 199 (372)
.++++++ .|..+..+..+..++ ..+ .+.+.....+.....+..+++.++|++.++-+ .++
T Consensus 19 ~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s-----------------~D~ 80 (330)
T 2hes_X 19 SFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS-----------------FDS 80 (330)
T ss_dssp EEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE-----------------TTS
T ss_pred eeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe-----------------CCC
Confidence 6777765 333334444466666 443 33222111111123567899999998777532 456
Q ss_pred eEEEEeCCC-------CeEEEEeCC-ccCcceEEEecCCCEEEEEeCCCCeEEEEEccCC-CCcc-eeeeccCCCCCCce
Q 017371 200 QLLKYDPSS-------NITTLVADG-FYFANGVALSRDEDYVVVCESWKFRCRKYWLKGE-RKGK-LETFAENLPGAPDN 269 (372)
Q Consensus 200 ~v~~~d~~t-------~~~~~~~~~-~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~-~~~~-~~~~~~~~~g~p~~ 269 (372)
.|..+|..+ .+......+ -.....++|+|++++|..+ +.+..|..+++... ...+ ...+. ........
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~-s~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~ 158 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATC-SRDKSVWIWETDESGEEYECISVLQ-EHSQDVKH 158 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEE-ETTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEE-eCCCEEEEEeccCCCCCeEEEEEec-cCCCceEE
Confidence 677676532 122222222 2234578999999865554 45667888887421 1111 12222 22233567
Q ss_pred eEEcCCCCEEEEEec
Q 017371 270 INLAPDGTFWIAIIK 284 (372)
Q Consensus 270 i~~d~~G~lwva~~~ 284 (372)
+++.++|++.++...
T Consensus 159 v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 159 VIWHPSEALLASSSY 173 (330)
T ss_dssp EEECSSSSEEEEEET
T ss_pred EEECCCCCEEEEEcC
Confidence 888999987776654
No 293
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.51 E-value=0.044 Score=48.38 Aligned_cols=230 Identities=10% Similarity=-0.037 Sum_probs=118.3
Q ss_pred CccEEEcCCCc-EEEEecCCeEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEE-Ec-CCCcEEEeeec
Q 017371 81 PEDASMDKNGV-IYTATRDGWIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHK-VS-EDGVENFLSYV 155 (372)
Q Consensus 81 p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~-~~-~~g~~~l~~~~ 155 (372)
..++++.++|. |..|..+|.|..++ +++.......... . -..+..++.+.++....+..+ ++ ..+...+...
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~-~-~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~- 146 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA-R-VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATL- 146 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-C-EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE-
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccc-e-EEEeecCCCEEEEEecCCceEeeecCCCceeEEEE-
Confidence 46789999885 45566899999998 5543322221111 1 223344566555544445444 33 3331111111
Q ss_pred CCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEE-----EEeCCccCcceEEEecCC
Q 017371 156 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT-----LVADGFYFANGVALSRDE 230 (372)
Q Consensus 156 ~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~-----~~~~~~~~~~gi~~~~dg 230 (372)
.+. ......+.+.++|+..++-. .++.|..+|..+++.. ...........+++.+++
T Consensus 147 ~~~-~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 208 (318)
T 4ggc_A 147 SGH-SQEVCGLRWAPDGRHLASGG-----------------NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQ 208 (318)
T ss_dssp ECC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTS
T ss_pred cCc-cCceEEEEEcCCCCEEEEEe-----------------cCcceeEEECCCCcccccceeeecccCCceEEEEecCCC
Confidence 110 12345677788888766532 4567887887654321 111111122456677766
Q ss_pred CEEEE-Ee-CCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 231 DYVVV-CE-SWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 231 ~~l~v-~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
..++. +. .....|..++..... ...... .......+...++++..++..+.
T Consensus 209 ~~~~~~~~~~~~~~i~lwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~sg~----------------------- 261 (318)
T 4ggc_A 209 SNVLATGGGTSDRHIRIWNVCSGA--CLSAVD--AHSQVCSILWSPHYKELISGHGF----------------------- 261 (318)
T ss_dssp TTEEEEEECTTTCEEEEEETTTCC--EEEEEE--CSSCEEEEEEETTTTEEEEEECT-----------------------
T ss_pred CcEEEEEecCCCCEEEEEeccccc--cccccc--ceeeeeeeeecccccceEEEEEc-----------------------
Confidence 54443 32 333445555543321 111111 12224556677777655544321
Q ss_pred cccccccCCCceEEEEEC-CCCcEEEEEECCCCCeeccceeeEEE-CCEEEEEeCCCCeEEEEeC
Q 017371 309 LFSQFITLGGGAHLIHVA-EDGTIIRNLVDPTGQLMSFVTSGLQV-DNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~-~~g~~~~~~~~~~g~~~~~~t~~~~~-~g~L~igs~~~~~i~~~~~ 371 (372)
..+.|..+| .+++.+..+....+ .++++... ++++.+..-....|.+.++
T Consensus 262 ---------~d~~i~iwd~~~~~~~~~l~gH~~----~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 262 ---------AQNQLVIWKYPTMAKVAELKGHTS----RVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp ---------TTCCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ---------CCCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 134566666 46888888764333 57888876 4544444445567777765
No 294
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.50 E-value=0.028 Score=56.99 Aligned_cols=183 Identities=12% Similarity=0.066 Sum_probs=95.2
Q ss_pred cEEEcCCCc-EEEE-ecCC----eEEEEe--CCceEEEEecCCCcccCeEEcCCCCEEEEeCCC--------------cE
Q 017371 83 DASMDKNGV-IYTA-TRDG----WIKRLQ--DGTWVNWKFIDSQTLVGLTSTKEGHLIICDNAN--------------GL 140 (372)
Q Consensus 83 ~i~~d~~G~-l~v~-~~~g----~i~~~~--~g~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~--------------gv 140 (372)
++++.+||+ |.++ +.+| .|+.++ +|+............ ++++.+|..|+++.... .|
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~-~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v 245 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFS-GLAWLGNDALLYSRFAEPKEGQAFQALNYNQTV 245 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESC-CCEESTTSEEEEEECCCC--------CCCCCEE
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceec-cEEEECCCEEEEEEecCcccccccccCCCCCEE
Confidence 467778885 3333 3333 478888 555433211111124 78898884466664322 26
Q ss_pred EEEc-CCC-c-EEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC--e-EEE
Q 017371 141 HKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN--I-TTL 213 (372)
Q Consensus 141 ~~~~-~~g-~-~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~--~-~~~ 213 (372)
++++ .++ . ..+.......+ .+..++.+++||+ |.++... .......|+.+|.+++ + .+.
T Consensus 246 ~~~~lgt~~~~~~lv~~~~~~~-~~~~~~~~SpDG~~l~~~~~~-------------~~~~~~~l~~~d~~~~~~~~~~~ 311 (741)
T 1yr2_A 246 WLHRLGTPQSADQPVFATPELP-KRGHGASVSSDGRWVVITSSE-------------GTDPVNTVHVARVTNGKIGPVTA 311 (741)
T ss_dssp EEEETTSCGGGCEEEECCTTCT-TCEEEEEECTTSCEEEEEEEC-------------TTCSCCEEEEEEEETTEECCCEE
T ss_pred EEEECCCCchhCEEEeccCCCC-eEEEEEEECCCCCEEEEEEEc-------------cCCCcceEEEEECCCCCCcccEE
Confidence 6666 334 2 22222211111 1345778899996 4443211 0012457999988766 5 555
Q ss_pred EeCCccCcceEEEecCCCEEEEEeCC---CCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 017371 214 VADGFYFANGVALSRDEDYVVVCESW---KFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 214 ~~~~~~~~~gi~~~~dg~~l~v~~~~---~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~ 283 (372)
+.......... +++||+.+|+.... +.+|+++++++.. .....+.........++..+ ++.++++..
T Consensus 312 l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~ 381 (741)
T 1yr2_A 312 LIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASYI 381 (741)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEEE
T ss_pred ecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEEE
Confidence 55433222222 46899988887542 4679999987632 23333332222223345555 455555544
No 295
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.50 E-value=0.0069 Score=61.70 Aligned_cols=183 Identities=12% Similarity=0.130 Sum_probs=101.5
Q ss_pred CCCccEEEcCC--C-cEEEEecCCeEEEEe--CCceEEEE---ecCCCcccCeEEcCC--CCEEEEeCC-CcEEEEc-CC
Q 017371 79 NHPEDASMDKN--G-VIYTATRDGWIKRLQ--DGTWVNWK---FIDSQTLVGLTSTKE--GHLIICDNA-NGLHKVS-ED 146 (372)
Q Consensus 79 ~~p~~i~~d~~--G-~l~v~~~~g~i~~~~--~g~~~~~~---~~~~~p~~gl~~d~d--G~l~v~~~~-~gv~~~~-~~ 146 (372)
....++++.++ | .|.++..+|.|..|+ +++..... ....... .+++.++ |+++++... ..+..++ .+
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~ 132 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKE 132 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCS
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE-EEEECCCCCCCEEEEEeCCCcEEEEEeec
Confidence 34567888765 6 466667899999998 55432222 2223445 8999998 876665444 4466666 43
Q ss_pred C--cEEEeeecCCcccccccceEEcc-------------CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC--
Q 017371 147 G--VENFLSYVNGSKLRFANDVVEAS-------------DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-- 209 (372)
Q Consensus 147 g--~~~l~~~~~~~~~~~~~~l~~d~-------------dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~-- 209 (372)
+ ....... +. ...+..+++.+ +|.+.++- ..+|.|..+|..++
T Consensus 133 ~~~~~~~~~~--~~-~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sg-----------------s~dg~I~iwd~~~~~~ 192 (753)
T 3jro_A 133 NGTTSPIIID--AH-AIGVNSASWAPATIEEDGEHNGTKESRKFVTG-----------------GADNLVKIWKYNSDAQ 192 (753)
T ss_dssp SSCCCCEEEE--CC-SSCEEEEEECCCC---------CGGGCCEEEE-----------------ETTSCEEEEEEETTTT
T ss_pred CCCcceeEee--cC-CCceEEEEecCcccccccccccCCCCCEEEEE-----------------ECCCeEEEEeccCCcc
Confidence 3 2111111 10 12455677777 46555542 24566777775544
Q ss_pred --eEEEEeCC-ccCcceEEEecC---CCEEEEEeCCCCeEEEEEccCCCCcceeeecc--CCCCCCceeEEcCCCCEEEE
Q 017371 210 --ITTLVADG-FYFANGVALSRD---EDYVVVCESWKFRCRKYWLKGERKGKLETFAE--NLPGAPDNINLAPDGTFWIA 281 (372)
Q Consensus 210 --~~~~~~~~-~~~~~gi~~~~d---g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~--~~~g~p~~i~~d~~G~lwva 281 (372)
.......+ -.....++++|+ ++ ++++...++.|..+++............. ...+....++++++|++.++
T Consensus 193 ~~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 193 TYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEE
T ss_pred cceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEE
Confidence 22222222 233467899999 66 44555556678888886532111111111 12334567889999976555
Q ss_pred Ee
Q 017371 282 II 283 (372)
Q Consensus 282 ~~ 283 (372)
..
T Consensus 272 ~s 273 (753)
T 3jro_A 272 SG 273 (753)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 296
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.45 E-value=0.023 Score=57.25 Aligned_cols=104 Identities=11% Similarity=-0.017 Sum_probs=61.8
Q ss_pred ccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCC-
Q 017371 163 ANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK- 240 (372)
Q Consensus 163 ~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~- 240 (372)
..++++.|||+ |.++... .+.....|+.+|.++++............+++|+|||+.|+++....
T Consensus 127 ~~~~~~SPDg~~la~~~~~-------------~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSA-------------SGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQ 193 (710)
T ss_dssp EEEEEECTTSSEEEEEEEE-------------TTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCC
T ss_pred EEEEEECCCCCEEEEEEcC-------------CCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCc
Confidence 45678889996 3333210 01122379999999888765322112245799999999898876432
Q ss_pred --------------CeEEEEEccCCCCcceeeeccC-CCCCCceeEEcCCCCEE
Q 017371 241 --------------FRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTFW 279 (372)
Q Consensus 241 --------------~~i~~~~~~g~~~~~~~~~~~~-~~g~p~~i~~d~~G~lw 279 (372)
..|+++++.+........+... .+.+..++.+++||+..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l 247 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYV 247 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEE
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEE
Confidence 3488888865432222233221 12334578899999733
No 297
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.44 E-value=0.023 Score=57.30 Aligned_cols=112 Identities=15% Similarity=0.249 Sum_probs=66.7
Q ss_pred CCcEEEEecCCeEEEEe--CCceEEEEecCCC------------cccCeEEcCCCCEEEEeCCCcEEEEc-CCCcEEEee
Q 017371 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ------------TLVGLTSTKEGHLIICDNANGLHKVS-EDGVENFLS 153 (372)
Q Consensus 89 ~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~------------p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g~~~l~~ 153 (372)
+|.||+++.++.|+.+| +|+.. |...... ...+++++ +|.||++.....|+.+| .+|......
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~-W~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLI-WKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEE-EEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCcee-EEEcCCCCccccccccccCCCCccEEE-CCEEEEEccCCEEEEEECCCCCEeeee
Confidence 68999999889999999 67644 3321111 11145664 68899987666799999 788322222
Q ss_pred ecC-Cc-c-cccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEe
Q 017371 154 YVN-GS-K-LRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVA 215 (372)
Q Consensus 154 ~~~-~~-~-~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~ 215 (372)
... .. . ......-.+ .+|.+|++..... ....+.|+.+|.+||+..+..
T Consensus 148 ~~~~~~~~~~~~~~sP~v-~~g~v~vg~~~~~------------~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRV-VNGKVVIGNGGAE------------FGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ECCSCTTSCCBCCSCCEE-ETTEEEECCBCTT------------TCCBCEEEEEETTTCCEEEEE
T ss_pred cCcCCCCCCccccCCcEE-ECCEEEEEeCCCc------------cCCCCEEEEEECCCCcEEEEe
Confidence 211 10 0 000111122 3688888643211 114678999999999876643
No 298
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.44 E-value=0.0031 Score=61.64 Aligned_cols=134 Identities=11% Similarity=0.058 Sum_probs=86.9
Q ss_pred CccEEEcCCC-cEEEEecCCeEEEEe--CCc--------eEEEEecC----CCcccCeEEcCCCCEEEEeCCCcEEEEc-
Q 017371 81 PEDASMDKNG-VIYTATRDGWIKRLQ--DGT--------WVNWKFID----SQTLVGLTSTKEGHLIICDNANGLHKVS- 144 (372)
Q Consensus 81 p~~i~~d~~G-~l~v~~~~g~i~~~~--~g~--------~~~~~~~~----~~p~~gl~~d~dG~l~v~~~~~gv~~~~- 144 (372)
-+++++.++| .|++|+.+|.|..|+ ++. +..+.... +... .+++.||| +..+..++.+..++
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~-sVawSPdg-Laass~D~tVrlWd~ 209 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT-HIVWYEDV-LVAALSNNSVFSMTV 209 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE-EEEEETTE-EEEEETTCCEEEECC
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE-EEEEcCCc-EEEEeCCCeEEEEEC
Confidence 5679999999 677888999999999 443 23332111 2456 89999999 77777677899998
Q ss_pred CCC-cE-EEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC-ccCc
Q 017371 145 EDG-VE-NFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG-FYFA 221 (372)
Q Consensus 145 ~~g-~~-~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~-~~~~ 221 (372)
.++ .. ....-..+. ...+.++++. |+..++. ..+.|..+|..+++...+..+ ...-
T Consensus 210 ~~~~~~~~~~tL~~~h-~~~V~svaFs--g~~LASa------------------~~~tIkLWd~~~~~~~~~~~gh~~~V 268 (588)
T 2j04_A 210 SASSHQPVSRMIQNAS-RRKITDLKIV--DYKVVLT------------------CPGYVHKIDLKNYSISSLKTGSLENF 268 (588)
T ss_dssp CSSSSCCCEEEEECCC-SSCCCCEEEE--TTEEEEE------------------CSSEEEEEETTTTEEEEEECSCCSCC
T ss_pred CCCccccceeeecccc-cCcEEEEEEE--CCEEEEE------------------eCCeEEEEECCCCeEEEEEcCCCceE
Confidence 333 21 111100111 1357788887 4544432 247899999987877555533 3345
Q ss_pred ceEEE--ecCCCEEEEEe
Q 017371 222 NGVAL--SRDEDYVVVCE 237 (372)
Q Consensus 222 ~gi~~--~~dg~~l~v~~ 237 (372)
.++++ ++|+..+.++.
T Consensus 269 ~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 269 HIIPLNHEKESTILLMSN 286 (588)
T ss_dssp CEEEETTCSSCEEEEECS
T ss_pred EEEEeeeCCCCCEEEEEc
Confidence 67899 99997665554
No 299
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.43 E-value=0.014 Score=58.79 Aligned_cols=183 Identities=9% Similarity=0.077 Sum_probs=96.3
Q ss_pred ccEEEcCCCcEE--EEecC----CeEEEEe--CCceEEEEecCCC-cccCeEEcCCCC-EEEEeCCCc------------
Q 017371 82 EDASMDKNGVIY--TATRD----GWIKRLQ--DGTWVNWKFIDSQ-TLVGLTSTKEGH-LIICDNANG------------ 139 (372)
Q Consensus 82 ~~i~~d~~G~l~--v~~~~----g~i~~~~--~g~~~~~~~~~~~-p~~gl~~d~dG~-l~v~~~~~g------------ 139 (372)
.++++.+||+.. ..+.. ..|+.++ +|+........+. .. ++++.+||+ |+.+.....
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~-~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYA-TPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTC-CCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccccc-ceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 356778888533 33323 4688888 5554300011111 14 889999997 444443222
Q ss_pred -EEEEc-CCC-c-EEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE
Q 017371 140 -LHKVS-EDG-V-ENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 214 (372)
Q Consensus 140 -v~~~~-~~g-~-~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~ 214 (372)
|++++ .++ . ..+........ ....++.+++||+ |.++... ......|+.+|..+++.+.+
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~-~~~~~~~~SpDG~~l~~~~~~--------------~~~~~~l~~~~~~~~~~~~l 267 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDP-TTFLQSDLSRDGKYLFVYILR--------------GWSENDVYWKRPGEKDFRLL 267 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCT-TCEEEEEECTTSCCEEEEEEE--------------TTTEEEEEEECTTCSSCEEE
T ss_pred EEEEEECCCCchhceEEEecCCCC-EEEEEEEECCCCCEEEEEEeC--------------CCCceEEEEEcCCCCceEEe
Confidence 88887 444 2 22222211111 2344778999996 4443211 00234788888766776666
Q ss_pred eCCccCcceEEEecCCCEEEEEeC---CCCeEEEEEccCCCCcceeeeccCC-CCCCceeEEcCCCCEEEEEe
Q 017371 215 ADGFYFANGVALSRDEDYVVVCES---WKFRCRKYWLKGERKGKLETFAENL-PGAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 215 ~~~~~~~~gi~~~~dg~~l~v~~~---~~~~i~~~~~~g~~~~~~~~~~~~~-~g~p~~i~~d~~G~lwva~~ 283 (372)
...........+ ++|+ +|+... .+.+|+++++++........+.... .....++.++ ++.++++..
T Consensus 268 ~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 268 VKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp EECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred ecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 544333333333 7887 777654 3578999998764322223333221 1123456666 566666554
No 300
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.40 E-value=0.075 Score=48.48 Aligned_cols=30 Identities=3% Similarity=0.018 Sum_probs=22.3
Q ss_pred CCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC
Q 017371 117 SQTLVGLTSTKEGHLIICDNANGLHKVS-EDG 147 (372)
Q Consensus 117 ~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g 147 (372)
+... .+++.+||+++++....|+..++ ..+
T Consensus 20 ~~V~-~v~fs~dg~~la~g~~~~~~iw~~~~~ 50 (355)
T 3vu4_A 20 NPVT-DYEFNQDQSCLILSTLKSFEIYNVHPV 50 (355)
T ss_dssp CCCC-EEEECTTSSEEEEECSSEEEEEEETTE
T ss_pred CceE-EEEECCCCCEEEEEcCCEEEEEecCCc
Confidence 3445 89999999988777667877777 444
No 301
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.38 E-value=0.092 Score=49.16 Aligned_cols=214 Identities=13% Similarity=0.055 Sum_probs=113.9
Q ss_pred cEEEcCCCcEEEEecCCeEEEEe--CCceEEEEec-CCCcccCeEEcCCCCEEEE-eCCCcEEEEc-CCC--cEEEeeec
Q 017371 83 DASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI-DSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG--VENFLSYV 155 (372)
Q Consensus 83 ~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~-~~~p~~gl~~d~dG~l~v~-~~~~gv~~~~-~~g--~~~l~~~~ 155 (372)
++.+| +..+.++..+|.|..++ +++....... .+... .+++ +++++++ ..+..+..++ .++ ...+...
T Consensus 138 ~~~~d-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h- 212 (435)
T 1p22_A 138 CLQYD-DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHH- 212 (435)
T ss_dssp EEECC-SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEE-EEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCC-
T ss_pred EEEEC-CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEE-EEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC-
Confidence 44443 23566777899999999 5554333222 22334 6666 5655554 4444577788 566 3333211
Q ss_pred CCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEE---EEeCCc-cCcceEEEecCCC
Q 017371 156 NGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT---LVADGF-YFANGVALSRDED 231 (372)
Q Consensus 156 ~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~---~~~~~~-~~~~gi~~~~dg~ 231 (372)
...+..++++ +...++ +..++.|..+|..+++.. ....+. .....+++ +++
T Consensus 213 ----~~~v~~l~~~--~~~l~s-----------------~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~ 267 (435)
T 1p22_A 213 ----CEAVLHLRFN--NGMMVT-----------------CSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK 267 (435)
T ss_dssp ----CSCEEEEECC--TTEEEE-----------------EETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT
T ss_pred ----CCcEEEEEEc--CCEEEE-----------------eeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC
Confidence 1234455554 233333 224677888887655432 222222 12234444 677
Q ss_pred EEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCcccc
Q 017371 232 YVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFS 311 (372)
Q Consensus 232 ~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~ 311 (372)
.++.+. .++.|..+++...+ ....+. ...+....+.. +|++.++...
T Consensus 268 ~l~s~~-~dg~i~vwd~~~~~--~~~~~~-~~~~~v~~~~~--~~~~l~~g~~--------------------------- 314 (435)
T 1p22_A 268 YIVSAS-GDRTIKVWNTSTCE--FVRTLN-GHKRGIACLQY--RDRLVVSGSS--------------------------- 314 (435)
T ss_dssp EEEEEE-TTSEEEEEETTTCC--EEEEEE-CCSSCEEEEEE--ETTEEEEEET---------------------------
T ss_pred EEEEEe-CCCeEEEEECCcCc--EEEEEc-CCCCcEEEEEe--CCCEEEEEeC---------------------------
Confidence 565554 56678888876532 112222 12222334444 4555555544
Q ss_pred ccccCCCceEEEEECC-CCcEEEEEECCCCCeeccceeeEEECCEEEEEeCCCCeEEEEeC
Q 017371 312 QFITLGGGAHLIHVAE-DGTIIRNLVDPTGQLMSFVTSGLQVDNHLYVISLTSNFIGKVQL 371 (372)
Q Consensus 312 ~~~~~~~~~~v~~~~~-~g~~~~~~~~~~g~~~~~~t~~~~~~g~L~igs~~~~~i~~~~~ 371 (372)
.+.|..+|. +|+.+..+....+ .++++..++..|..|+.. ..|.++++
T Consensus 315 -------dg~i~iwd~~~~~~~~~~~~h~~----~v~~~~~~~~~l~sg~~d-g~i~vwd~ 363 (435)
T 1p22_A 315 -------DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYD-GKIKVWDL 363 (435)
T ss_dssp -------TSCEEEEETTTCCEEEEECCCSS----CEEEEECCSSEEEEEETT-SCEEEEEH
T ss_pred -------CCeEEEEECCCCCEEEEEeCCcC----cEEEEEecCCEEEEEeCC-CcEEEEEC
Confidence 356777774 4788777764332 466777666777777754 56666653
No 302
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.37 E-value=0.067 Score=47.31 Aligned_cols=184 Identities=13% Similarity=0.128 Sum_probs=96.3
Q ss_pred CCccEEEcC--CCc-EEEEecCCeEEEEe--CCce---EEEEecCCCcccCeEEcCC--CCEEEEeCC-CcEEEEc-CCC
Q 017371 80 HPEDASMDK--NGV-IYTATRDGWIKRLQ--DGTW---VNWKFIDSQTLVGLTSTKE--GHLIICDNA-NGLHKVS-EDG 147 (372)
Q Consensus 80 ~p~~i~~d~--~G~-l~v~~~~g~i~~~~--~g~~---~~~~~~~~~p~~gl~~d~d--G~l~v~~~~-~gv~~~~-~~g 147 (372)
...++++.+ +|. |..+..||.|..|+ +++. ..+........ .+++.|+ |.++++... ..+..++ .++
T Consensus 55 ~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 55 PVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPMLLVASSDGKVSVVEFKEN 133 (297)
T ss_dssp CEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEEBCSS
T ss_pred CeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee-EEEeCcCCCCcEEEEEECCCcEEEEEecCC
Confidence 345677754 364 55666899999998 4432 22222223345 8899886 765555433 4466666 333
Q ss_pred --cEEEeeecCCcccccccceEEccC-------------CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe--
Q 017371 148 --VENFLSYVNGSKLRFANDVVEASD-------------GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI-- 210 (372)
Q Consensus 148 --~~~l~~~~~~~~~~~~~~l~~d~d-------------G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~-- 210 (372)
...... .+. ...++.+++.++ ++++++ +..++.|..+|..+++
T Consensus 134 ~~~~~~~~--~~h-~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s-----------------gs~D~~v~lwd~~~~~~~ 193 (297)
T 2pm7_B 134 GTTSPIII--DAH-AIGVNSASWAPATIEEDGEHNGTKESRKFVT-----------------GGADNLVKIWKYNSDAQT 193 (297)
T ss_dssp SCBCCEEE--ECC-SSCEEEEEECCCC------------CCEEEE-----------------EETTSCEEEEEEETTTTE
T ss_pred Cceeeeee--ecc-cCccceEeecCCcccccccCCCCCCcceEEE-----------------EcCCCcEEEEEEcCCCce
Confidence 211111 110 123456666665 344443 2245566666654333
Q ss_pred --EEEEeCC-ccCcceEEEecCC--CEEEEEeCCCCeEEEEEccCCCCc-ceeeec-cCCCCCCceeEEcCCCCEEEEEe
Q 017371 211 --TTLVADG-FYFANGVALSRDE--DYVVVCESWKFRCRKYWLKGERKG-KLETFA-ENLPGAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 211 --~~~~~~~-~~~~~gi~~~~dg--~~l~v~~~~~~~i~~~~~~g~~~~-~~~~~~-~~~~g~p~~i~~d~~G~lwva~~ 283 (372)
......+ -...+.++|+|++ ..++++.+.+..|..++++..... ....+. ....+....+++.++|++.++..
T Consensus 194 ~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 194 YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 2222222 2234678999986 346666666777887777643211 111111 11223345678889998766554
Q ss_pred c
Q 017371 284 K 284 (372)
Q Consensus 284 ~ 284 (372)
.
T Consensus 274 ~ 274 (297)
T 2pm7_B 274 G 274 (297)
T ss_dssp T
T ss_pred C
Confidence 4
No 303
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.36 E-value=0.096 Score=48.83 Aligned_cols=168 Identities=11% Similarity=0.063 Sum_probs=92.4
Q ss_pred ccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEec--CC-CcccCeEEcCCCCEEEEeCC-CcEEEEc-CCC--cEEEe
Q 017371 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFI--DS-QTLVGLTSTKEGHLIICDNA-NGLHKVS-EDG--VENFL 152 (372)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~--~~-~p~~gl~~d~dG~l~v~~~~-~gv~~~~-~~g--~~~l~ 152 (372)
..|+..+++.|-+|. ++.|+.|+ +|+....... .+ ... ++++.++|+++++... ..|..++ .++ +..+
T Consensus 109 ~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~-sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~- 185 (420)
T 4gga_A 109 NLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM- 185 (420)
T ss_dssp BCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-
T ss_pred eeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEE-EEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEE-
Confidence 346777766666664 88999999 6765544332 22 345 9999999986665444 4477777 566 3322
Q ss_pred eecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe--EEEEeCCccCcceEEEecCC
Q 017371 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLVADGFYFANGVALSRDE 230 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~--~~~~~~~~~~~~gi~~~~dg 230 (372)
.+.. ... .++..++++.++- ..++.+..+|..... +..+........++.+++++
T Consensus 186 ---~~h~-~~v--~~~s~~~~~l~sg-----------------s~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 186 ---TSHS-ARV--GSLSWNSYILSSG-----------------SRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp ---CCCS-SCE--EEEEEETTEEEEE-----------------ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred ---eCCC-Cce--EEEeeCCCEEEEE-----------------eCCCceeEeeecccceeeEEecccccceeeeeecCCC
Confidence 1110 112 2333456655542 245667777754332 22233333445678899999
Q ss_pred CEEEEEeCCCCeEEEEEccCCCCcc--eeeeccCCCCCCceeEEcCCCC
Q 017371 231 DYVVVCESWKFRCRKYWLKGERKGK--LETFAENLPGAPDNINLAPDGT 277 (372)
Q Consensus 231 ~~l~v~~~~~~~i~~~~~~g~~~~~--~~~~~~~~~g~p~~i~~d~~G~ 277 (372)
+.+.... .++.+..++....+... ..... ...+....++..+++.
T Consensus 243 ~~l~s~~-~D~~v~i~~~~~~~~~~~~~~~~~-~~~~~V~~~~~~p~~~ 289 (420)
T 4gga_A 243 RHLASGG-NDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPWQS 289 (420)
T ss_dssp SEEEEEE-TTSCEEEEESSCCSSCSCCSEEEC-CCSSCEEEEEECTTCT
T ss_pred Ceeeeee-ccccceEEeeccccccceeeeeec-ccCCceeeeeeCCCcc
Confidence 8665554 45667777765432211 11111 1222344566666553
No 304
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.36 E-value=0.063 Score=52.93 Aligned_cols=111 Identities=15% Similarity=0.215 Sum_probs=63.7
Q ss_pred CCcEEEEecCCeEEEEe--CCceEEEEecCCC-----------cccCeEEcCCCCEEEEeCCCcEEEEc-CCCcEEEeee
Q 017371 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFIDSQ-----------TLVGLTSTKEGHLIICDNANGLHKVS-EDGVENFLSY 154 (372)
Q Consensus 89 ~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~~-----------p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g~~~l~~~ 154 (372)
+|.+|+++..++|+.+| +|+.. |...... .. ++++. ++++|++.....|+.+| .+|...+...
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~-W~~~~~~~~~~~~~~~~~~~-g~a~~-~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRL-WTYNHRLPDDIRPCCDVVNR-GAAIY-GDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEE-EEEECCCCTTCCCSSCSCCC-CCEEE-TTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEE-EEEcCCCCcccccccccCCC-ccEEE-CCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 68999999756699999 67643 3221111 13 55664 68899987767799999 7883333222
Q ss_pred cCCccc--ccccceEEcc---CC--cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE
Q 017371 155 VNGSKL--RFANDVVEAS---DG--SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 214 (372)
Q Consensus 155 ~~~~~~--~~~~~l~~d~---dG--~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~ 214 (372)
...... .....-.+.. +| .||+...+. +....+.|+.+|..||+..+.
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~------------e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGD------------EFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCG------------GGCCBCEEEEECTTTCCEEEE
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEecccc------------ccCCCCEEEEEECCCCCEEee
Confidence 221100 0011112221 23 677743210 112367899999999987664
No 305
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.24 E-value=0.01 Score=60.31 Aligned_cols=131 Identities=7% Similarity=-0.033 Sum_probs=75.9
Q ss_pred ccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEecCC-Ccc----cCeEEcCCCCE-EEEeCC---------CcEEEEc
Q 017371 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKFIDS-QTL----VGLTSTKEGHL-IICDNA---------NGLHKVS 144 (372)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~~~~-~p~----~gl~~d~dG~l-~v~~~~---------~gv~~~~ 144 (372)
.++...++|.+++.+ +|.|+.++ +|+.+.+..... ... .++.+.|||+. .++... ..++.+|
T Consensus 20 ~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp CCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred cccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 357788888766665 89999999 565544432211 111 03678999974 333221 1245677
Q ss_pred -CCC-cEEEeeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC----
Q 017371 145 -EDG-VENFLSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG---- 217 (372)
Q Consensus 145 -~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~---- 217 (372)
.+| ...+... . ......++.|||+ |.++ .++.||.+|..+++...+...
T Consensus 99 ~~~~~~~~l~~~-~----~~~~~~~~SPdG~~la~~-------------------~~~~i~~~~~~~~~~~~lt~~g~~~ 154 (740)
T 4a5s_A 99 LNKRQLITEERI-P----NNTQWVTWSPVGHKLAYV-------------------WNNDIYVKIEPNLPSYRITWTGKED 154 (740)
T ss_dssp TTTTEECCSSCC-C----TTEEEEEECSSTTCEEEE-------------------ETTEEEEESSTTSCCEECCSCCBTT
T ss_pred CCCCcEEEcccC-C----CcceeeEECCCCCEEEEE-------------------ECCeEEEEECCCCceEEEcCCCCcc
Confidence 555 3322111 1 1345678889995 5443 234688888776665543221
Q ss_pred ---------------ccCcceEEEecCCCEEEEEe
Q 017371 218 ---------------FYFANGVALSRDEDYVVVCE 237 (372)
Q Consensus 218 ---------------~~~~~gi~~~~dg~~l~v~~ 237 (372)
+....+++|+|||+.|.+..
T Consensus 155 ~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 155 IIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp TEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred ceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 11223588999999887753
No 306
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.23 E-value=0.0027 Score=62.39 Aligned_cols=73 Identities=16% Similarity=0.191 Sum_probs=52.8
Q ss_pred ccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc--cCcceEEEecCCCEEEEE
Q 017371 159 KLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF--YFANGVALSRDEDYVVVC 236 (372)
Q Consensus 159 ~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~--~~~~gi~~~~dg~~l~v~ 236 (372)
.+..|..|++|++|+|||+..+..-.. .......+..++.+++.++++..++.+- ....|++|+||+++||+.
T Consensus 474 ~f~~PDNL~fd~~G~LwI~eDg~~~~~-----~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNA-----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCS-----GGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CccCCcceEECCCCCEEEEecCCCccc-----ccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 467889999999999999865421111 1112235668999999999998877542 234589999999998876
No 307
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.22 E-value=0.075 Score=47.50 Aligned_cols=199 Identities=11% Similarity=0.043 Sum_probs=95.8
Q ss_pred CCccEEEcC--CC-cEEEEecCCeEEEEe--CCceEE---EEecCCCcccCeEEcCC--CCEEEEeCC-CcEEEEc-CCC
Q 017371 80 HPEDASMDK--NG-VIYTATRDGWIKRLQ--DGTWVN---WKFIDSQTLVGLTSTKE--GHLIICDNA-NGLHKVS-EDG 147 (372)
Q Consensus 80 ~p~~i~~d~--~G-~l~v~~~~g~i~~~~--~g~~~~---~~~~~~~p~~gl~~d~d--G~l~v~~~~-~gv~~~~-~~g 147 (372)
...++++.+ +| .|..+..|+.|..|+ +++.+. +....+... .+++.|+ |.++++... ..+..++ ..+
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN-SVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC-EEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE-EEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 455677764 35 566777899999998 443222 222223445 8999887 665555443 3466666 333
Q ss_pred -cEEEeeecCCcccccccceEEccCCc---EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC-eEEEE--eCC-cc
Q 017371 148 -VENFLSYVNGSKLRFANDVVEASDGS---LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLV--ADG-FY 219 (372)
Q Consensus 148 -~~~l~~~~~~~~~~~~~~l~~d~dG~---i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~-~~~~~--~~~-~~ 219 (372)
.........+. ....+.+++.+++. +... ..... ......+..+..++.|..+|..++ +.+.+ ..+ -.
T Consensus 138 ~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~ 213 (316)
T 3bg1_A 138 GQWEVKKINNAH-TIGCNAVSWAPAVVPGSLIDH-PSGQK--PNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSD 213 (316)
T ss_dssp SCEEECCBTTSS-SSCBCCCEECCCCCC-------CCSCC--CCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSS
T ss_pred CCcceeeeeccc-cCCcceEEEccccCCcccccc-ccccC--ccccceEEEecCCCeEEEEEeCCCCccceeeecccCCC
Confidence 21111111111 12345666666521 1000 00000 000001112334555655655432 22222 122 12
Q ss_pred CcceEEEecCC---CEEEEEeCCCCeEEEEEccCCCCcc--eeeeccCCCCCCceeEEcCCCCEEEEEec
Q 017371 220 FANGVALSRDE---DYVVVCESWKFRCRKYWLKGERKGK--LETFAENLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 220 ~~~gi~~~~dg---~~l~v~~~~~~~i~~~~~~g~~~~~--~~~~~~~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
..+.++|+|++ ..++++.+.+..|..++++...... ...+. ...+....+++.++|++.++...
T Consensus 214 ~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH-KFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE-ECSSCEEEEEECTTTCCEEEEES
T ss_pred ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh-cCCCcEEEEEEcCCCCEEEEEcC
Confidence 34678899986 1355566567778878775421111 11111 12233567888999976665543
No 308
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.14 E-value=0.025 Score=58.88 Aligned_cols=149 Identities=5% Similarity=-0.053 Sum_probs=92.1
Q ss_pred CCccEEEcCCCc-EEEEecCCeEEEEe--CCce-EEEEecCCCcccCeEEcCCCCEEEE-eCCCcEEEEc-CCC-cEEEe
Q 017371 80 HPEDASMDKNGV-IYTATRDGWIKRLQ--DGTW-VNWKFIDSQTLVGLTSTKEGHLIIC-DNANGLHKVS-EDG-VENFL 152 (372)
Q Consensus 80 ~p~~i~~d~~G~-l~v~~~~g~i~~~~--~g~~-~~~~~~~~~p~~gl~~d~dG~l~v~-~~~~gv~~~~-~~g-~~~l~ 152 (372)
...++++.+ |. |..++.++.|..|+ +++. ..+. ..+... .++++++|+..++ .....|..++ .++ ...+.
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~ 136 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFK 136 (902)
T ss_dssp CEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCccccce
Confidence 356788888 66 77777899999999 4543 3333 234456 8999999975554 4444577787 555 32221
Q ss_pred e-------ecCCcccccccceEEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCc------
Q 017371 153 S-------YVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGF------ 218 (372)
Q Consensus 153 ~-------~~~~~~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~------ 218 (372)
. .........+..+++.+++ .+.++ +..++.| .+|..+++........
T Consensus 137 i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~-----------------g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~ 198 (902)
T 2oaj_A 137 LDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLI-----------------SYEYVTL-TYSLVENEIKQSFIYELPPFAP 198 (902)
T ss_dssp ECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEE-----------------ECSSCEE-EEETTTTEEEEEECCCBCTTCC
T ss_pred eccccccccccccCCCCeEEEEEccCCCCEEEE-----------------EeCCCcE-EEECCCCceEEEEecccCCcCC
Confidence 1 0001112356789999864 44443 1246778 8898877655443322
Q ss_pred -------------cCcceEEEecCCCEEEEEeCCCCeEEEEEccC
Q 017371 219 -------------YFANGVALSRDEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 219 -------------~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g 250 (372)
...+.++|+|||+++..+ ..++.|..+++..
T Consensus 199 ~~~~~~~~~~~h~~~V~~v~fspdg~~lasg-s~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 199 GGDFSEKTNEKRTPKVIQSLYHPNSLHIITI-HEDNSLVFWDANS 242 (902)
T ss_dssp CSTTCCCTTSCBCCCEEEEEECTTSSEEEEE-ETTCCEEEEETTT
T ss_pred CcccccccccccCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCC
Confidence 234678999999855544 4566788888754
No 309
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.10 E-value=0.056 Score=54.33 Aligned_cols=107 Identities=15% Similarity=-0.025 Sum_probs=62.3
Q ss_pred cccceEEccCCcE-EEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCc--ceEEEecCCCEEEEEeC
Q 017371 162 FANDVVEASDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA--NGVALSRDEDYVVVCES 238 (372)
Q Consensus 162 ~~~~l~~d~dG~i-~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~--~gi~~~~dg~~l~v~~~ 238 (372)
...++++.|||+. .++.. ..+.....|+.+|.++++... ...+... .+++|+|||+.++++..
T Consensus 122 ~~~~~~~SPDG~~la~~~~-------------~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~ 187 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQK-------------PNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWL 187 (695)
T ss_dssp EEEEEEECTTSSEEEEEEE-------------ETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEC-------------CCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEe
Confidence 3457788999973 33311 012234679999998887530 1122222 67999999998888764
Q ss_pred C------------CCeEEEEEccCCCCcceeeeccC-CCCCCceeEEcCCCC-EEEEE
Q 017371 239 W------------KFRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGT-FWIAI 282 (372)
Q Consensus 239 ~------------~~~i~~~~~~g~~~~~~~~~~~~-~~g~p~~i~~d~~G~-lwva~ 282 (372)
. ..+|+++++.+........+... .+....++.+++||+ |.++.
T Consensus 188 d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~ 245 (695)
T 2bkl_A 188 PTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYI 245 (695)
T ss_dssp CCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEE
T ss_pred cCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEE
Confidence 2 23488888866432222233211 112334688899996 44443
No 310
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.013 Score=57.04 Aligned_cols=177 Identities=11% Similarity=-0.011 Sum_probs=100.5
Q ss_pred CCccEEEcCC------C-cEEEEecCCeEEEEe--CCceE------------EEEecCCCcccCeEEcCCCCEEEEeCCC
Q 017371 80 HPEDASMDKN------G-VIYTATRDGWIKRLQ--DGTWV------------NWKFIDSQTLVGLTSTKEGHLIICDNAN 138 (372)
Q Consensus 80 ~p~~i~~d~~------G-~l~v~~~~g~i~~~~--~g~~~------------~~~~~~~~p~~gl~~d~dG~l~v~~~~~ 138 (372)
...++++.++ | .|..++.+|.|..|+ .++.. .+....+... ++++.+++.|..+..+.
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~-sv~~s~~~~lasgs~Dg 287 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLIT-TFDFLSPTTVVCGFKNG 287 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEE-EEEESSSSEEEEEETTS
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEE-EEEecCCCeEEEEeCCC
Confidence 3556777765 3 455566899998888 33211 1211123344 88888777666665555
Q ss_pred cEEEEc-CCC---cEEEeeecCCcccccccce--EEccCC-cEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeE
Q 017371 139 GLHKVS-EDG---VENFLSYVNGSKLRFANDV--VEASDG-SLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT 211 (372)
Q Consensus 139 gv~~~~-~~g---~~~l~~~~~~~~~~~~~~l--~~d~dG-~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~ 211 (372)
.|..+| .++ ...+.. . ...+..| ++.++| ++.+|-+ .++.|..+|..+++.
T Consensus 288 tV~lWD~~~~~~~~~~~~~--H---~~~V~sv~~~~s~~g~~~laS~S-----------------~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQV--H---DSYILSVSTAYSDFEDTVVSTVA-----------------VDGYFYIFNPKDIAT 345 (524)
T ss_dssp EEEEEETTBCSSCSEEEEC--S---SSCEEEEEEECCTTSCCEEEEEE-----------------TTSEEEEECGGGHHH
T ss_pred EEEEEECCCCCCceEEeec--c---cccEEEEEEEcCCCCCeEEEEec-----------------cCCeEEEEECCCCCc
Confidence 577777 444 222211 1 1245566 456777 7777633 567888888765432
Q ss_pred EEEeCC-c--cCcceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEe
Q 017371 212 TLVADG-F--YFANGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 212 ~~~~~~-~--~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~ 283 (372)
.....+ . .....++++|+++. +++....+.|..+++..... ...+.. ..+....+++.++|.+.++..
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~--~~~l~g-H~~~V~sva~Sp~g~~l~Sgs 416 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFA--VHPLVS-RETTITAIGVSRLHPMVLAGS 416 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTC--CEEEEE-CSSCEEEEECCSSCCBCEEEE
T ss_pred ccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECccccc--ceeeec-CCCceEEEEeCCCCCeEEEEE
Confidence 111111 1 12357999999985 55555566777777654321 122222 233456788889887666544
No 311
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.97 E-value=0.14 Score=51.35 Aligned_cols=103 Identities=11% Similarity=0.022 Sum_probs=59.8
Q ss_pred cccceEEccCCc-EEEE-eCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCC
Q 017371 162 FANDVVEASDGS-LYFT-VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESW 239 (372)
Q Consensus 162 ~~~~l~~d~dG~-i~vt-d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~ 239 (372)
...++++.+||+ |.++ +.+ +.....|+.+|.++|+.......-....+++|+ |++.|+++...
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~--------------G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~ 194 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA--------------GSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYD 194 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS--------------SCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESS
T ss_pred EEEEEEECCCCCEEEEEEecC--------------CCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEec
Confidence 455678899997 3333 221 222357899999988854431111112478899 99988887643
Q ss_pred ------------CCeEEEEEccCCCCcceeeeccCC--CCCCceeEEcCCCCEE
Q 017371 240 ------------KFRCRKYWLKGERKGKLETFAENL--PGAPDNINLAPDGTFW 279 (372)
Q Consensus 240 ------------~~~i~~~~~~g~~~~~~~~~~~~~--~g~p~~i~~d~~G~lw 279 (372)
...|+++++.+.......++.... +.+-.++..++||...
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l 248 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFL 248 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEE
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEE
Confidence 245888887654322233333211 1223357789999743
No 312
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.94 E-value=0.082 Score=49.94 Aligned_cols=149 Identities=9% Similarity=0.039 Sum_probs=86.6
Q ss_pred CCccEEEcCCCcEEE----E-ecCCeEEEEe--CC-----c----eEEEEe---cCCCcccCeEEcCC-CCEEEE-eCCC
Q 017371 80 HPEDASMDKNGVIYT----A-TRDGWIKRLQ--DG-----T----WVNWKF---IDSQTLVGLTSTKE-GHLIIC-DNAN 138 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v----~-~~~g~i~~~~--~g-----~----~~~~~~---~~~~p~~gl~~d~d-G~l~v~-~~~~ 138 (372)
...++++.++|...+ + ..++.|..|+ ++ + +..+.. ...... ++++.|+ ++++++ ..+.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI-DMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE-EEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE-EEEECCCCCCEEEEEECCC
Confidence 477899999986554 2 3678888888 22 1 111221 123455 8999987 676665 4444
Q ss_pred cEEEEc-CCCcEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC-
Q 017371 139 GLHKVS-EDGVENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD- 216 (372)
Q Consensus 139 gv~~~~-~~g~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~- 216 (372)
.+..+| .++....... + ....+..+++.++|+..++- ..++.|..+|.. ++......
T Consensus 173 ~v~iwD~~~~~~~~~~~--~-~~~~v~~v~wspdg~~lasg-----------------s~dg~v~iwd~~-~~~~~~~~~ 231 (434)
T 2oit_A 173 SIAVLQVTETVKVCATL--P-STVAVTSVCWSPKGKQLAVG-----------------KQNGTVVQYLPT-LQEKKVIPC 231 (434)
T ss_dssp CEEEEEESSSEEEEEEE--C-GGGCEEEEEECTTSSCEEEE-----------------ETTSCEEEECTT-CCEEEEECC
T ss_pred eEEEEEcCCCcceeecc--C-CCCceeEEEEcCCCCEEEEE-----------------cCCCcEEEEccC-CcccccccC
Confidence 577788 6552211111 1 11356789999999765542 256789999987 44333221
Q ss_pred Ccc-------CcceEEEecCCCEEEEEeCCCC------eEEEEEccC
Q 017371 217 GFY-------FANGVALSRDEDYVVVCESWKF------RCRKYWLKG 250 (372)
Q Consensus 217 ~~~-------~~~gi~~~~dg~~l~v~~~~~~------~i~~~~~~g 250 (372)
... ....+++++++.++.....+.+ .+..+++..
T Consensus 232 ~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 232 PPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp CTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred CcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 111 2346788888765555444432 366666653
No 313
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.80 E-value=0.21 Score=50.49 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=58.8
Q ss_pred cccceEEccCCcE-EEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCC
Q 017371 162 FANDVVEASDGSL-YFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWK 240 (372)
Q Consensus 162 ~~~~l~~d~dG~i-~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~ 240 (372)
...++++.|||+. .++... .+.....|+.+|.++++.......-....+++|+|| +.++++....
T Consensus 164 ~~~~~~~SPDG~~la~~~~~-------------~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQD-------------GGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEE-------------TTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred EEEeEEECCCCCEEEEEEcC-------------CCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecC
Confidence 4557889999973 333110 011224699999998876443111111257899999 8888876432
Q ss_pred -------------CeEEEEEccCCCCcceeeeccC-CCCCCceeEEcCCCCE
Q 017371 241 -------------FRCRKYWLKGERKGKLETFAEN-LPGAPDNINLAPDGTF 278 (372)
Q Consensus 241 -------------~~i~~~~~~g~~~~~~~~~~~~-~~g~p~~i~~d~~G~l 278 (372)
.+|+++++.+........+... .+.+..++.+++||+.
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~ 281 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRW 281 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCE
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCE
Confidence 3588888755432222233211 1112346788999963
No 314
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.74 E-value=0.018 Score=54.62 Aligned_cols=146 Identities=7% Similarity=-0.087 Sum_probs=80.0
Q ss_pred cccceEEccCCcEEEE-eCCCCCCCcccccccccccCCCeEEEEeCCCC-----eE------EEEeCC-ccCcceEEEec
Q 017371 162 FANDVVEASDGSLYFT-VSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-----IT------TLVADG-FYFANGVALSR 228 (372)
Q Consensus 162 ~~~~l~~d~dG~i~vt-d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~-----~~------~~~~~~-~~~~~gi~~~~ 228 (372)
.+..+++.++|+..+. .. .+..++.|..+|..++ +. .....+ -.....++|+|
T Consensus 94 ~v~~l~~spdg~~lav~~~--------------sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p 159 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMM--------------SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNP 159 (434)
T ss_dssp CEEEEEECTTSCEEEEEEE--------------ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECS
T ss_pred cccEEEEcCCCCEEEEEEe--------------ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECC
Confidence 4678999999975551 00 0124566777775432 10 111111 23456789999
Q ss_pred CCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCc
Q 017371 229 DEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPK 308 (372)
Q Consensus 229 dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~ 308 (372)
++..++++.+.++.|..+++.... ...... ........++..++|++.++...
T Consensus 160 ~~~~~las~s~Dg~v~iwD~~~~~--~~~~~~-~~~~~v~~v~wspdg~~lasgs~------------------------ 212 (434)
T 2oit_A 160 TVPSMVAVCLADGSIAVLQVTETV--KVCATL-PSTVAVTSVCWSPKGKQLAVGKQ------------------------ 212 (434)
T ss_dssp SCTTEEEEEETTSCEEEEEESSSE--EEEEEE-CGGGCEEEEEECTTSSCEEEEET------------------------
T ss_pred CCCCEEEEEECCCeEEEEEcCCCc--ceeecc-CCCCceeEEEEcCCCCEEEEEcC------------------------
Confidence 843366655567778888886531 111111 11224677899999965555444
Q ss_pred cccccccCCCceEEEEECCCCcEEEEEECCCCC---eeccceeeEEECCEEEE
Q 017371 309 LFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQ---LMSFVTSGLQVDNHLYV 358 (372)
Q Consensus 309 ~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~---~~~~~t~~~~~~g~L~i 358 (372)
.+.|..+|.+++....+..+... ....+.++....+..|+
T Consensus 213 ----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 213 ----------NGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp ----------TSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred ----------CCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 35677778777766655443221 01135566655444444
No 315
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.67 E-value=0.019 Score=55.80 Aligned_cols=116 Identities=17% Similarity=0.187 Sum_probs=72.5
Q ss_pred CcceEEEecCCCEEEEEeCCC---------------------CeEEEEEccCCC----Ccceeeecc-------------
Q 017371 220 FANGVALSRDEDYVVVCESWK---------------------FRCRKYWLKGER----KGKLETFAE------------- 261 (372)
Q Consensus 220 ~~~gi~~~~dg~~l~v~~~~~---------------------~~i~~~~~~g~~----~~~~~~~~~------------- 261 (372)
.|.+++++|..+.+|++-+++ +.|+++..++.. ....+.+..
T Consensus 385 RpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~~~~ 464 (592)
T 4a9v_A 385 RPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPKG 464 (592)
T ss_dssp CEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGGG
T ss_pred CccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccccccc
Confidence 367899998666799987643 568898875421 111233321
Q ss_pred --------CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECC-CCcEE
Q 017371 262 --------NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAE-DGTII 332 (372)
Q Consensus 262 --------~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~-~g~~~ 332 (372)
.....||+|.+|++|+||+++-..... .. ......+..++++++ +|++.
T Consensus 465 g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~~~------------------~g----~~~~~gnn~v~~~dp~tGel~ 522 (592)
T 4a9v_A 465 GSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSN------------------AG----DFAGMGNNQMLCADPATGEIR 522 (592)
T ss_dssp CCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCC------------------SG----GGTTCCSCEEEEECTTTCCEE
T ss_pred CccCccccCccCCCCceEECCCCCEEEEeCCCcCc------------------cc----cccccCCceEEEEeCCCCeEE
Confidence 012359999999999999965431000 00 000122458999998 58887
Q ss_pred EEEECCCCCeeccceeeEEE--CCEEEEEe
Q 017371 333 RNLVDPTGQLMSFVTSGLQV--DNHLYVIS 360 (372)
Q Consensus 333 ~~~~~~~g~~~~~~t~~~~~--~g~L~igs 360 (372)
..+..|.+. .++.+++. +..||+.-
T Consensus 523 ~fl~~P~~a---EpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 523 RFMVGPIGC---EVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEECCTTC---EEEEEEECTTSSEEEEEE
T ss_pred EEEeCCCCc---cccCCEECCCCCEEEEEE
Confidence 777666543 57778876 36888875
No 316
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.58 E-value=0.019 Score=56.42 Aligned_cols=116 Identities=17% Similarity=0.206 Sum_probs=72.5
Q ss_pred cCcceEEEecCCCEEEEEeCCC---------------------CeEEEEEccCCCCc----ceeeecc------------
Q 017371 219 YFANGVALSRDEDYVVVCESWK---------------------FRCRKYWLKGERKG----KLETFAE------------ 261 (372)
Q Consensus 219 ~~~~gi~~~~dg~~l~v~~~~~---------------------~~i~~~~~~g~~~~----~~~~~~~------------ 261 (372)
..|.++.++|....+|++-+++ +.|+++..++.... ..+.+..
T Consensus 384 ~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred eccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccc
Confidence 3467899998655699987743 46999987643211 1122210
Q ss_pred ---------CCCCCCceeEEcCCCCEEEEEecCchhHHHHhhcchhHHHHHHhcCccccccccCCCceEEEEECCC-CcE
Q 017371 262 ---------NLPGAPDNINLAPDGTFWIAIIKLDARRMKILNSSKLIKHVLAAYPKLFSQFITLGGGAHLIHVAED-GTI 331 (372)
Q Consensus 262 ---------~~~g~p~~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~v~~~~~~-g~~ 331 (372)
+....||||++|++|+|||++-.......++ ....++.+..++++ |++
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~----------------------~~~gnn~~~~~~~~~g~~ 521 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDF----------------------AGMGNNQMLCADPATGEI 521 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGG----------------------TTTCSCEEEEECTTTCCE
T ss_pred ccccccCCCCCccCCcceEECCCCCEEEEecCCCcccccc----------------------cccccceEEEEeCCCCeE
Confidence 0123599999999999999986531111000 01224567777764 888
Q ss_pred EEEEECCCCCeeccceeeEEE--CCEEEEE
Q 017371 332 IRNLVDPTGQLMSFVTSGLQV--DNHLYVI 359 (372)
Q Consensus 332 ~~~~~~~~g~~~~~~t~~~~~--~g~L~ig 359 (372)
.+.+..|.|. .++++++. +.+||+.
T Consensus 522 ~rf~~~P~ga---E~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 522 RRFMVGPIGC---EVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECCTTC---EEEEEEECTTSSEEEEE
T ss_pred EEEEeCCCCc---cCcCeeECCCCCEEEEE
Confidence 8777777764 67788886 3578775
No 317
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.39 E-value=0.33 Score=48.39 Aligned_cols=189 Identities=13% Similarity=0.040 Sum_probs=93.2
Q ss_pred EEEcCCCcEEEEe--cCCeEEEEe--CCceEEEEe-cCCCcccCeEEcCCCCEEEEeCC-------CcEEEEc-CCC-cE
Q 017371 84 ASMDKNGVIYTAT--RDGWIKRLQ--DGTWVNWKF-IDSQTLVGLTSTKEGHLIICDNA-------NGLHKVS-EDG-VE 149 (372)
Q Consensus 84 i~~d~~G~l~v~~--~~g~i~~~~--~g~~~~~~~-~~~~p~~gl~~d~dG~l~v~~~~-------~gv~~~~-~~g-~~ 149 (372)
+++..+|.||+.- .+..+.+|| .++++.... ...+-..+.++.++|+|||.... ..+.++| .++ .+
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 5666789999875 345789999 566665432 11222214556678999998641 2377788 455 55
Q ss_pred EEeeecCCcccccc-cceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccC--------
Q 017371 150 NFLSYVNGSKLRFA-NDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYF-------- 220 (372)
Q Consensus 150 ~l~~~~~~~~~~~~-~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~-------- 220 (372)
.+... ...++... ...++..++++|+.-.. + ..++.......+.+||+.+++..........
T Consensus 328 ~~~~~-~~~p~~~~~~~~~~~~~~~iyv~Gg~------~--g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~ 398 (656)
T 1k3i_A 328 SLPNA-KVNPMLTADKQGLYRSDNHAWLFGWK------K--GSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDA 398 (656)
T ss_dssp EETTS-CSGGGCCCCTTGGGTTTCSCCEEECG------G--GCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCC
T ss_pred eCCCc-cccccccccccceeecCCceEEEECC------C--CcEEEecCccceeeeecCCcceeecCCccccccccCCCC
Confidence 54211 00111111 01122345667664211 0 0011112345789999987764433221111
Q ss_pred cceE--EEecCCCEEEEEeCCC--------C---eEEEEEccCCCCcceeeec-cCCC-C-CCceeEEcCCCCEEEEEec
Q 017371 221 ANGV--ALSRDEDYVVVCESWK--------F---RCRKYWLKGERKGKLETFA-ENLP-G-APDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 221 ~~gi--~~~~dg~~l~v~~~~~--------~---~i~~~~~~g~~~~~~~~~~-~~~~-g-~p~~i~~d~~G~lwva~~~ 284 (372)
..+. .++.-++.+|+..-.. . .|..|++... ...... ...+ + .-...++-++|.|||....
T Consensus 399 ~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~ 475 (656)
T 1k3i_A 399 MCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS---PNTVFASNGLYFARTFHTSVVLPDGSTFITGGQ 475 (656)
T ss_dssp BTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC---CEEEECTTCCSSCCBSCEEEECTTSCEEEECCB
T ss_pred CCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC---CeeEEccCCCCCCcccCCeEECCCCCEEEECCc
Confidence 1233 3334344588875321 1 4556655432 222221 1222 1 1233456678999997653
No 318
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.17 E-value=0.44 Score=43.51 Aligned_cols=51 Identities=12% Similarity=-0.043 Sum_probs=34.3
Q ss_pred CCCeEEEEeCCCCeEEEEeCCcc-Ccc-eEEEecCCCEEEEEeCCCCeEEEEEc
Q 017371 197 PHGQLLKYDPSSNITTLVADGFY-FAN-GVALSRDEDYVVVCESWKFRCRKYWL 248 (372)
Q Consensus 197 ~~g~v~~~d~~t~~~~~~~~~~~-~~~-gi~~~~dg~~l~v~~~~~~~i~~~~~ 248 (372)
.++.|..+|..+++......+.. ... .++|+|||++|+ +.+.++.|..++.
T Consensus 303 ~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La-SGS~D~TIklWd~ 355 (356)
T 2w18_A 303 TSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL-AGQKDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE-EECTTSCEEEEEE
T ss_pred CCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE-EEECCCcEEEecC
Confidence 56788889999888666554432 234 478999999554 5555666766653
No 319
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.12 E-value=0.62 Score=40.67 Aligned_cols=142 Identities=10% Similarity=0.004 Sum_probs=80.0
Q ss_pred ccEEEcCCCcEEEEecCCeEEEEe--CCceEEEEe--cCC-CcccCeEEcCCCCEEEEeCCCc-EEEEc-CCC--cEEEe
Q 017371 82 EDASMDKNGVIYTATRDGWIKRLQ--DGTWVNWKF--IDS-QTLVGLTSTKEGHLIICDNANG-LHKVS-EDG--VENFL 152 (372)
Q Consensus 82 ~~i~~d~~G~l~v~~~~g~i~~~~--~g~~~~~~~--~~~-~p~~gl~~d~dG~l~v~~~~~g-v~~~~-~~g--~~~l~ 152 (372)
..|+..+++.|-+| .++.|..|| +|+...... ..+ ... .+++.++|+++++....| +..++ .++ ...+.
T Consensus 29 ~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~-~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 29 NLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp BCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEE-EEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 45778877755555 588999999 666544332 122 245 899999998776654444 66667 566 33221
Q ss_pred eecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCe--EEEEeCCccCcceEEEecCC
Q 017371 153 SYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNI--TTLVADGFYFANGVALSRDE 230 (372)
Q Consensus 153 ~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~--~~~~~~~~~~~~gi~~~~dg 230 (372)
+ +...-..+..++.+.++-. ..+.+..++..++. ...+.........+++.+++
T Consensus 107 ----~---h~~~~~~~~~~~~~l~s~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 107 ----S---HSARVGSLSWNSYILSSGS-----------------RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp ----C---CSSCEEEEEEETTEEEEEE-----------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred ----C---ccceEEEeecCCCEEEEEe-----------------cCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC
Confidence 1 1111223444555555422 34555555544332 22222333344567788999
Q ss_pred CEEEEEeCCCCeEEEEEccC
Q 017371 231 DYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 231 ~~l~v~~~~~~~i~~~~~~g 250 (372)
+.++.+. .++.|..+++..
T Consensus 163 ~~l~s~~-~d~~i~iwd~~~ 181 (318)
T 4ggc_A 163 RHLASGG-NDNLVNVWPSAP 181 (318)
T ss_dssp SEEEEEE-TTSCEEEEESSC
T ss_pred CEEEEEe-cCcceeEEECCC
Confidence 8665544 456788888754
No 320
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=95.91 E-value=1.7 Score=43.91 Aligned_cols=99 Identities=12% Similarity=0.188 Sum_probs=59.0
Q ss_pred CCccEEEcCC--CcEEEEecCCeEEEEe-CC-ceEEEEecCC------CcccCeEEcCC--CCEEEEeC---------CC
Q 017371 80 HPEDASMDKN--GVIYTATRDGWIKRLQ-DG-TWVNWKFIDS------QTLVGLTSTKE--GHLIICDN---------AN 138 (372)
Q Consensus 80 ~p~~i~~d~~--G~l~v~~~~g~i~~~~-~g-~~~~~~~~~~------~p~~gl~~d~d--G~l~v~~~---------~~ 138 (372)
....|++++. +.+|++...|.|+|.+ .| .++.+....+ .....|++||. +.+|++.. ..
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~ 103 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMG 103 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCc
Confidence 5668999865 6899998778899998 44 4555432111 11227889863 58999863 13
Q ss_pred cEEEEcCCC--cEEEeeecC-Cc--c-cccccceEEccC--CcEEEEe
Q 017371 139 GLHKVSEDG--VENFLSYVN-GS--K-LRFANDVVEASD--GSLYFTV 178 (372)
Q Consensus 139 gv~~~~~~g--~~~l~~~~~-~~--~-~~~~~~l~~d~d--G~i~vtd 178 (372)
+|++-...| .+.+..... +. + ......|++++. +.+|++.
T Consensus 104 ~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 104 AILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp EEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred cEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 566665555 555433211 00 0 012357899874 5788753
No 321
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.41 E-value=0.54 Score=47.70 Aligned_cols=105 Identities=14% Similarity=0.083 Sum_probs=59.9
Q ss_pred ccceEEc-cCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCC-eEEEEeCCcc-CcceEEEecCCCEEEEEeC
Q 017371 163 ANDVVEA-SDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSN-ITTLVADGFY-FANGVALSRDEDYVVVCES 238 (372)
Q Consensus 163 ~~~l~~d-~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~-~~~~~~~~~~-~~~gi~~~~dg~~l~v~~~ 238 (372)
.....+. +||+ |.++... .+.....|+.+|.+++ +. +...+. ...+++|++||+.|+++..
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~-------------~G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~~ 240 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDM-------------SGNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVTK 240 (751)
T ss_dssp EEEEEECTTTTCEEEEEEES-------------SSSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEEE
T ss_pred EeeeEecCCCCCEEEEEEeC-------------CCCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEEE
Confidence 4467889 9996 4444221 1122346999999887 52 111111 1347899999988887753
Q ss_pred CC----CeEEEEEccCCCCcceeeeccCCCCCCceeEEcCCCC-EEEEE
Q 017371 239 WK----FRCRKYWLKGERKGKLETFAENLPGAPDNINLAPDGT-FWIAI 282 (372)
Q Consensus 239 ~~----~~i~~~~~~g~~~~~~~~~~~~~~g~p~~i~~d~~G~-lwva~ 282 (372)
.. .+|+++++.+........+......+-.++.+.+||+ |.+..
T Consensus 241 d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp CTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred CCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 21 3688888866432222333222222334567889996 44433
No 322
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.38 E-value=1.2 Score=44.39 Aligned_cols=120 Identities=15% Similarity=0.146 Sum_probs=69.6
Q ss_pred CCccEEEcC-CCcEEEEe-cC----C-------eEEEEe--CCceEEEEec-C---CCcccCeEEcCCCCEEEEeCC--C
Q 017371 80 HPEDASMDK-NGVIYTAT-RD----G-------WIKRLQ--DGTWVNWKFI-D---SQTLVGLTSTKEGHLIICDNA--N 138 (372)
Q Consensus 80 ~p~~i~~d~-~G~l~v~~-~~----g-------~i~~~~--~g~~~~~~~~-~---~~p~~gl~~d~dG~l~v~~~~--~ 138 (372)
.+.+.++-+ +|.||+.. .+ + .+.+|| .++++..... . .... +.++..+|.||+.... .
T Consensus 187 ~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~-~~~~~~~g~lyv~GG~~~~ 265 (656)
T 1k3i_A 187 VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP-GISMDGNGQIVVTGGNDAK 265 (656)
T ss_dssp CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC-EEEECTTSCEEEECSSSTT
T ss_pred CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc-cccCCCCCCEEEeCCCCCC
Confidence 355677776 88888853 11 1 467788 5666543321 1 1122 4677789999998643 3
Q ss_pred cEEEEc-CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEE
Q 017371 139 GLHKVS-EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLV 214 (372)
Q Consensus 139 gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~ 214 (372)
.+.++| .++ .+.+... +.. +.-...++-++|+||+.-.. + ........+.+||+.+++.+.+
T Consensus 266 ~v~~yd~~t~~W~~~~~~-~~~--R~~~s~~~~~dg~iyv~GG~--~---------~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDM-QVA--RGYQSSATMSDGRVFTIGGS--W---------SGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp CEEEEEGGGTEEEECCCC-SSC--CSSCEEEECTTSCEEEECCC--C---------CSSSCCCCEEEEETTTTEEEEE
T ss_pred ceEEecCcCCceeECCCC-Ccc--ccccceEEecCCeEEEEeCc--c---------cCCcccccceEeCCCCCcceeC
Confidence 488888 455 4444321 211 22234556579999995210 0 0011234689999998888776
No 323
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.08 E-value=0.023 Score=52.56 Aligned_cols=52 Identities=10% Similarity=-0.089 Sum_probs=29.3
Q ss_pred CCCeEEEEeCCCCeEEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccC
Q 017371 197 PHGQLLKYDPSSNITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 197 ~~g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g 250 (372)
.++.|+.+|.++|+..+.... .......+..+++ +|++.+.++.|+.++..+
T Consensus 17 ~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 17 LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp TTSEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC----
T ss_pred CCCEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECCC
Confidence 457899999999988765443 2222233344554 677766677899998853
No 324
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=95.07 E-value=3.5 Score=42.03 Aligned_cols=152 Identities=9% Similarity=0.017 Sum_probs=82.2
Q ss_pred CCccEEEcCC--CcEEEEecCCeEEEEe-CC-ceEEEEecC-------CCcccCeEEcCC--CCEEEEeCC------CcE
Q 017371 80 HPEDASMDKN--GVIYTATRDGWIKRLQ-DG-TWVNWKFID-------SQTLVGLTSTKE--GHLIICDNA------NGL 140 (372)
Q Consensus 80 ~p~~i~~d~~--G~l~v~~~~g~i~~~~-~g-~~~~~~~~~-------~~p~~gl~~d~d--G~l~v~~~~------~gv 140 (372)
...+|++++. +.+|++...|.|++-+ .| .++.+.... .... .|++++. +.+|++... .+|
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~-~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTE-SIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEE-EEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCcee-EEEECCCCCCEEEEEeCccCCCcccEE
Confidence 5667888863 6899999888899988 44 355433211 1234 7888874 578887533 355
Q ss_pred EEEcCCC--cEEEeeecC--C-ccc-ccccceEEccC--CcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEE
Q 017371 141 HKVSEDG--VENFLSYVN--G-SKL-RFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITT 212 (372)
Q Consensus 141 ~~~~~~g--~~~l~~~~~--~-~~~-~~~~~l~~d~d--G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~ 212 (372)
++-+..| .+.+..... + .+. .....|++++. +.+|+.. ..+.||+=+-.....+
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~------------------~~~gl~~S~DgG~TW~ 156 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT------------------RTEGIWKSSDRAKTWT 156 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC------------------SSSCEEEESSTTSSCE
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe------------------ccCCEEEECCCCcccC
Confidence 5555555 444432111 1 000 12346888863 4777752 1345776543323444
Q ss_pred EEeCCc------cCcceEEEec-CCCEEEEEeCCCCeEEEEEccCC
Q 017371 213 LVADGF------YFANGVALSR-DEDYVVVCESWKFRCRKYWLKGE 251 (372)
Q Consensus 213 ~~~~~~------~~~~gi~~~~-dg~~l~v~~~~~~~i~~~~~~g~ 251 (372)
.+.... .....++++| +.+.+|++......|++ ..++.
T Consensus 157 ~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~-S~DgG 201 (789)
T 1sqj_A 157 NVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV-THDGG 201 (789)
T ss_dssp EETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE-ESSTT
T ss_pred CCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE-EcCCC
Confidence 443210 1112456666 44568887643245654 44544
No 325
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.59 E-value=2.7 Score=38.48 Aligned_cols=184 Identities=12% Similarity=0.010 Sum_probs=89.7
Q ss_pred CCccEEEcC--------CCcEEE-EecCCeEEEEe--CCc-eEEEEecCCCcccCeEEcCCC-CEEEE-eCCCcEEEEc-
Q 017371 80 HPEDASMDK--------NGVIYT-ATRDGWIKRLQ--DGT-WVNWKFIDSQTLVGLTSTKEG-HLIIC-DNANGLHKVS- 144 (372)
Q Consensus 80 ~p~~i~~d~--------~G~l~v-~~~~g~i~~~~--~g~-~~~~~~~~~~p~~gl~~d~dG-~l~v~-~~~~gv~~~~- 144 (372)
...++++.+ +|++.+ +..|+.|..|| ++. ............ .+++.|++ +++++ ..+.-+..+|
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~-~v~~~p~~~~~l~~~~~d~~v~~wd~ 216 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGI-SVQFRPSNPNQLIVGERNGNIRIFDW 216 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEE-EEEEETTEEEEEEEEETTSEEEEEET
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcE-EEEECCCCCceEEecCCCCEEEEEEC
Confidence 355677765 565554 44899999998 443 333333334556 89999987 34444 4434466677
Q ss_pred CCC--cEEEeeecC----------C----------cccccccceEEc-cCCcEEEEeCCCCCCCcccccccccccCCCeE
Q 017371 145 EDG--VENFLSYVN----------G----------SKLRFANDVVEA-SDGSLYFTVSSSKYLPHEYCLDILEGKPHGQL 201 (372)
Q Consensus 145 ~~g--~~~l~~~~~----------~----------~~~~~~~~l~~d-~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v 201 (372)
..+ ......... . ........+.+. +||+..++-. .++.+
T Consensus 217 ~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s-----------------~d~~i 279 (393)
T 4gq1_A 217 TLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMC-----------------KSGAW 279 (393)
T ss_dssp TCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEEC-----------------TTSEE
T ss_pred CCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEe-----------------CCCCE
Confidence 444 111110000 0 000122234443 5665544422 34556
Q ss_pred EEEeCCCCeEEEEe-------------------CCccCcceEEEec-CCCEEEEEeCCCCeEEEEEccCCCCcceeeecc
Q 017371 202 LKYDPSSNITTLVA-------------------DGFYFANGVALSR-DEDYVVVCESWKFRCRKYWLKGERKGKLETFAE 261 (372)
Q Consensus 202 ~~~d~~t~~~~~~~-------------------~~~~~~~gi~~~~-dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~ 261 (372)
..+|..+++..... .......+..+++ .++.+.++...+..|..++........ ...
T Consensus 280 ~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~--~~~- 356 (393)
T 4gq1_A 280 LRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS--IPI- 356 (393)
T ss_dssp EEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE--EEE-
T ss_pred EEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE--Eec-
Confidence 66665433221110 0111122344444 345566666667788888876443221 122
Q ss_pred CCCCCCceeEEcCCCCEEEEEec
Q 017371 262 NLPGAPDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 262 ~~~g~p~~i~~d~~G~lwva~~~ 284 (372)
........+++.+||+++++...
T Consensus 357 ~~~~~V~svafspdG~~LA~as~ 379 (393)
T 4gq1_A 357 QLGMPIVDFCWHQDGSHLAIATE 379 (393)
T ss_dssp ECSSCEEEEEECTTSSEEEEEES
T ss_pred CCCCcEEEEEEcCCCCEEEEEeC
Confidence 12223567999999998776654
No 326
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=94.58 E-value=2.6 Score=38.34 Aligned_cols=152 Identities=11% Similarity=-0.036 Sum_probs=75.7
Q ss_pred CeEEcC---CCCEEEEeCC-CcEEEEc-CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCccccccccc
Q 017371 122 GLTSTK---EGHLIICDNA-NGLHKVS-EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILE 194 (372)
Q Consensus 122 gl~~d~---dG~l~v~~~~-~gv~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~ 194 (372)
.+++.+ +|.++++... .-|..+| .+| +..+... .........+++.++|.+.++-+.. .....+..
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~--~~~v~~v~~vafSpdG~~lvs~s~~-----~~~w~laS 255 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID--DSYQASVCHKAYSEMGLLFIVLSHP-----CAKESESL 255 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC--C---CCCEEEEEEETTEEEEEEC---------------
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC--CcceeeeEEEEECCCCCEEEEeccC-----CCcceeec
Confidence 345554 6788887555 4466677 677 4555311 1111245567899999877653320 00112334
Q ss_pred ccCCCeEEEEeCCCCeEEEEeCCccCcc-----eEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeeccCCCCCCce
Q 017371 195 GKPHGQLLKYDPSSNITTLVADGFYFAN-----GVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFAENLPGAPDN 269 (372)
Q Consensus 195 ~~~~g~v~~~d~~t~~~~~~~~~~~~~~-----gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~g~p~~ 269 (372)
+...+.+..+|+++++...+.. ...|. -+..+.++. +.++.+.++.|..+++...+. ...+.......-..
T Consensus 256 Gs~D~tIklWd~~tgk~l~v~~-~~~p~Gh~~~~lsg~~sg~-~lASgS~DgTIkIWDl~tGk~--l~tL~gH~~~vvs~ 331 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLSVGVML-YCLPPGQAGRFLEGDVKDH-CAAAILTSGTIAIWDLLLGQC--TALLPPVSDQHWSF 331 (356)
T ss_dssp --CCEEEEEEETTTTEEEEEEE-ECCCTTCCCCEEEEEEETT-EEEEEETTSCEEEEETTTCSE--EEEECCC--CCCCE
T ss_pred cCCCcEEEEEECCCCEEEEEEE-eeccCCCcceeEccccCCC-EEEEEcCCCcEEEEECCCCcE--EEEecCCCCCeEEE
Confidence 5567778888998887543221 00011 111222233 455555566788888765321 12222111111234
Q ss_pred eEEcCCCCEEEEEec
Q 017371 270 INLAPDGTFWIAIIK 284 (372)
Q Consensus 270 i~~d~~G~lwva~~~ 284 (372)
+++.+||.+.++...
T Consensus 332 vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 332 VKWSGTDSHLLAGQK 346 (356)
T ss_dssp EEECSSSSEEEEECT
T ss_pred EEECCCCCEEEEEEC
Confidence 789999987776654
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.57 E-value=2.7 Score=42.13 Aligned_cols=147 Identities=11% Similarity=0.080 Sum_probs=83.7
Q ss_pred CCCcEEEEec-----CCeEEEEe--CCceEEEE-e------cCCCcccCeEEcC-CCCEEEEeCC-------CcEEEEc-
Q 017371 88 KNGVIYTATR-----DGWIKRLQ--DGTWVNWK-F------IDSQTLVGLTSTK-EGHLIICDNA-------NGLHKVS- 144 (372)
Q Consensus 88 ~~G~l~v~~~-----~g~i~~~~--~g~~~~~~-~------~~~~p~~gl~~d~-dG~l~v~~~~-------~gv~~~~- 144 (372)
-++.||+... ...+++++ +++|+... . +..+...+.+... +|.|||.... ..+.++|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4667887542 23588888 67788776 2 2222221344444 7889987532 2377788
Q ss_pred CCC-cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCC--ccCc
Q 017371 145 EDG-VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADG--FYFA 221 (372)
Q Consensus 145 ~~g-~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~--~~~~ 221 (372)
.+. .+.+... +.. +.-...++-.+|+||+.-.. ...+.+++||+.+++++.+... ...+
T Consensus 476 ~t~~W~~~~~~-p~~--R~~h~~~~~~~~~iyv~GG~---------------~~~~~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 476 KTREWSMIKSL-SHT--RFRHSACSLPDGNVLILGGV---------------TEGPAMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp TTTEEEECCCC-SBC--CBSCEEEECTTSCEEEECCB---------------CSSCSEEEEETTTTEEEECCCSSGGGGS
T ss_pred CCCcEEECCCC-CCC--cccceEEEEcCCEEEEECCC---------------CCCCCEEEEECCCCceEEccCCCCCCCc
Confidence 444 5544321 211 22233444358999995210 0111699999999988876541 2222
Q ss_pred ----ceEEEecCCCEEEEEeCC-------CCeEEEEEccCCC
Q 017371 222 ----NGVALSRDEDYVVVCESW-------KFRCRKYWLKGER 252 (372)
Q Consensus 222 ----~gi~~~~dg~~l~v~~~~-------~~~i~~~~~~g~~ 252 (372)
..++++.+.+.+|+..-. .+.+++|++....
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 235556554568887632 2569999987653
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.38 E-value=0.2 Score=45.58 Aligned_cols=109 Identities=9% Similarity=0.144 Sum_probs=61.2
Q ss_pred CCcEEEEecCCeEEEEe--CCceEEEEecC--CCcccCeE---EcCCCCEEEEe--CCCcEEEEc-CCCcEEEeeecCC-
Q 017371 89 NGVIYTATRDGWIKRLQ--DGTWVNWKFID--SQTLVGLT---STKEGHLIICD--NANGLHKVS-EDGVENFLSYVNG- 157 (372)
Q Consensus 89 ~G~l~v~~~~g~i~~~~--~g~~~~~~~~~--~~p~~gl~---~d~dG~l~v~~--~~~gv~~~~-~~g~~~l~~~~~~- 157 (372)
+|.+|+++.+|.|+.++ +|+...-.... ..+. +.. ...+|.+|+.. ....|+.++ .+|.+.+....+.
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~-~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLI-EIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSE-ECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcE-EecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 56899999999999999 67654332222 1122 111 01245677664 234477787 5663333332221
Q ss_pred ---cccccccceEE------ccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC
Q 017371 158 ---SKLRFANDVVE------ASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD 216 (372)
Q Consensus 158 ---~~~~~~~~l~~------d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~ 216 (372)
.++..-....+ ..+|.+|+. ..+|+++.+|..+|+..+...
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~G------------------s~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTG------------------SMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEEC------------------EEEEEEEEEETTTCCEEEEES
T ss_pred eeccccccCCCceeecccccccCCEEEEE------------------ecCCEEEEEECCCCcEEEEEe
Confidence 11111111122 257888884 357899999999999887653
No 329
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.00 E-value=2.2 Score=43.23 Aligned_cols=113 Identities=11% Similarity=0.083 Sum_probs=63.1
Q ss_pred CeEEc-CCCC-E-EEEeCC----CcEEEEc-CCCcEEEeeecCCcccccccceEEccCC-cEEEEeCCCCCCCccccccc
Q 017371 122 GLTST-KEGH-L-IICDNA----NGLHKVS-EDGVENFLSYVNGSKLRFANDVVEASDG-SLYFTVSSSKYLPHEYCLDI 192 (372)
Q Consensus 122 gl~~d-~dG~-l-~v~~~~----~gv~~~~-~~g~~~l~~~~~~~~~~~~~~l~~d~dG-~i~vtd~~~~~~~~~~~~~~ 192 (372)
+.++. |||+ | |+.+.. ..|+.++ .+|.+.+..... ....++++.+|| .|+++...
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~l~y~~~d------------ 241 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTSLFYVTKD------------ 241 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTEEEEEEEC------------
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc----CceeeEEEecCCCEEEEEEEC------------
Confidence 67889 9997 3 333322 1277777 444111111111 113467888998 56665321
Q ss_pred ccccCCCeEEEEeCCCCeE--EEEeC--CccCcceEEEecCCCEEEEEeC--CCCeEEEEEccCC
Q 017371 193 LEGKPHGQLLKYDPSSNIT--TLVAD--GFYFANGVALSRDEDYVVVCES--WKFRCRKYWLKGE 251 (372)
Q Consensus 193 ~~~~~~g~v~~~d~~t~~~--~~~~~--~~~~~~gi~~~~dg~~l~v~~~--~~~~i~~~~~~g~ 251 (372)
.......||+++..+++. +.+.. .-.+-.++.+++||++|+++.. ....|+.++++++
T Consensus 242 -~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 242 -ETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp -TTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred -CCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 001123689998876542 22221 1123346789999999888653 2457888888754
No 330
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=93.52 E-value=7.2 Score=39.51 Aligned_cols=181 Identities=13% Similarity=0.070 Sum_probs=95.7
Q ss_pred CCccEEEcCCC--cEEEEecCCeEEEEe-CC-ceEEEEecC------------CCcccCeEEcC--CCCEEEEeC-----
Q 017371 80 HPEDASMDKNG--VIYTATRDGWIKRLQ-DG-TWVNWKFID------------SQTLVGLTSTK--EGHLIICDN----- 136 (372)
Q Consensus 80 ~p~~i~~d~~G--~l~v~~~~g~i~~~~-~g-~~~~~~~~~------------~~p~~gl~~d~--dG~l~v~~~----- 136 (372)
...+|++++.+ .+|++...|.|++-. .| .++.+.... .... .|++|+ .+.+|++..
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~-~ia~dp~~~~~~~~~~g~~~~~ 100 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTE-SIALDPHNPDRLYLAQGDYVQW 100 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEE-EEECCTTCTTCEEEEECSCTTT
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCccccccee-EEEECCCCCCEEEEEecccccC
Confidence 56789998744 799998778899988 44 355433211 1134 678887 367998753
Q ss_pred --CCcEEEEcCCC--cEEEeeecC--Cc-ccc-cccceEEccC--CcEEEEeCCCCCCCcccccccccccCCCeEEEEeC
Q 017371 137 --ANGLHKVSEDG--VENFLSYVN--GS-KLR-FANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDP 206 (372)
Q Consensus 137 --~~gv~~~~~~g--~~~l~~~~~--~~-~~~-~~~~l~~d~d--G~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 206 (372)
..+|++-+..| .+.+..... +. ..+ ....|++++. +.+|+.. ..+.||+=+-
T Consensus 101 ~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~------------------~~~~l~~S~D 162 (763)
T 3a0f_A 101 DPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS------------------RTQGLWRSTD 162 (763)
T ss_dssp CSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC------------------SSSCEEEESS
T ss_pred CCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe------------------CCCcEEEECC
Confidence 24566655545 555432211 00 001 1136888764 6788852 2345775432
Q ss_pred CCCeEEEEeCCccC-------cceEEEecC-CCEEEEEeCCCCeEEEEEccCCCCcceeeeccC----------------
Q 017371 207 SSNITTLVADGFYF-------ANGVALSRD-EDYVVVCESWKFRCRKYWLKGERKGKLETFAEN---------------- 262 (372)
Q Consensus 207 ~t~~~~~~~~~~~~-------~~gi~~~~d-g~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~---------------- 262 (372)
.....+.+. .+.. ...++++|. .+.+|++......|++= .++.+.-+ .....
T Consensus 163 gG~TW~~~~-~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~S-~DgG~tW~--~~~~~~~~~~~~~~~~~~p~~ 238 (763)
T 3a0f_A 163 RAQTWSRMN-QLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWVT-WDGGANWS--QVGGQPTQWSDWTKSIVAASG 238 (763)
T ss_dssp TTSSCEECT-TSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEEE-SSSSSSCE--ECTTCCCSCCHHHHHHHHHHC
T ss_pred CCcCccccc-cCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEEE-CCCCCCcc--ccCCCcccccccccccccccc
Confidence 223344332 2211 124566664 34588776543235543 34332211 11100
Q ss_pred -----CCCCCceeEEcCCCCEEEEEe
Q 017371 263 -----LPGAPDNINLAPDGTFWIAII 283 (372)
Q Consensus 263 -----~~g~p~~i~~d~~G~lwva~~ 283 (372)
....+..++++++|.+|++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~g~l~~~~~ 264 (763)
T 3a0f_A 239 TAIQSSGPLPIKIALGKNGRLYITYS 264 (763)
T ss_dssp CCCSSSSCEEEEEEECTTSCEEEEEE
T ss_pred ccccCCCCcceeEEECCCCcEEEEec
Confidence 011234567788999999864
No 331
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=92.55 E-value=6.1 Score=36.05 Aligned_cols=135 Identities=10% Similarity=0.030 Sum_probs=70.9
Q ss_pred EEEEecCCeEEEEe--CCceEEEEe---c---CCCcccCeEEcC--------CCCEEEEeCC-CcEEEEc-CCC--cEEE
Q 017371 92 IYTATRDGWIKRLQ--DGTWVNWKF---I---DSQTLVGLTSTK--------EGHLIICDNA-NGLHKVS-EDG--VENF 151 (372)
Q Consensus 92 l~v~~~~g~i~~~~--~g~~~~~~~---~---~~~p~~gl~~d~--------dG~l~v~~~~-~gv~~~~-~~g--~~~l 151 (372)
|..+..|+.|..++ .++...... . .+... .+++.| ||+++++... +-+..+| .++ ...+
T Consensus 104 las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~-~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~ 182 (393)
T 4gq1_A 104 LACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVN-DIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAG 182 (393)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEE-EEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCccceeeeecccCCCCCceE-EEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeee
Confidence 33444788888887 444332211 1 12345 788875 7877776544 4577777 444 2222
Q ss_pred eeecCCcccccccceEEccCCc-EEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC--------------
Q 017371 152 LSYVNGSKLRFANDVVEASDGS-LYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD-------------- 216 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~-i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~-------------- 216 (372)
. ... ..+..+++.|++. +.++ +..++.|..+|..+++......
T Consensus 183 ~-~~~----~~v~~v~~~p~~~~~l~~-----------------~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~ 240 (393)
T 4gq1_A 183 Y-PLS----SPGISVQFRPSNPNQLIV-----------------GERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN 240 (393)
T ss_dssp E-ECS----SCEEEEEEETTEEEEEEE-----------------EETTSEEEEEETTCCC----------CSCCCSEEEE
T ss_pred c-CCC----CCcEEEEECCCCCceEEe-----------------cCCCCEEEEEECCCCcccccccccCCcccceEEecc
Confidence 1 111 2345788888874 4443 2246677777776554322110
Q ss_pred -----------C-ccCcceEEEe-cCCCEEEEEeCCCCeEEEEEccC
Q 017371 217 -----------G-FYFANGVALS-RDEDYVVVCESWKFRCRKYWLKG 250 (372)
Q Consensus 217 -----------~-~~~~~gi~~~-~dg~~l~v~~~~~~~i~~~~~~g 250 (372)
+ ...-..+.++ +|++.++ +...++.+..+++..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~-s~s~d~~i~vwd~~~ 286 (393)
T 4gq1_A 241 TLPLVNTCHSSGIASSLANVRWIGSDGSGIL-AMCKSGAWLRWNLFA 286 (393)
T ss_dssp SGGGC------CCSSSCSEEEEETTTTCEEE-EECTTSEEEEEEC--
T ss_pred cccceeeeecccccccceeeeeecCCCCEEE-EEeCCCCEEEEECcc
Confidence 0 0112345665 7888554 555667787777653
No 332
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.38 E-value=5.9 Score=35.50 Aligned_cols=153 Identities=14% Similarity=0.143 Sum_probs=75.8
Q ss_pred CCcEEEEe--cCCeEEEEe-C---CceEEEEecC--CCcccCeEEcCCCCEEEEeCC-----------CcEEEEc-CCC-
Q 017371 89 NGVIYTAT--RDGWIKRLQ-D---GTWVNWKFID--SQTLVGLTSTKEGHLIICDNA-----------NGLHKVS-EDG- 147 (372)
Q Consensus 89 ~G~l~v~~--~~g~i~~~~-~---g~~~~~~~~~--~~p~~gl~~d~dG~l~v~~~~-----------~gv~~~~-~~g- 147 (372)
++.||+.- ....+++++ . .+++...... .+...+++. -+|.|||.... ..+.++| .+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 67888754 345799998 4 5566554322 222213333 36889987432 2377787 445
Q ss_pred cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccc----------------------cccccCCCeEEEEe
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLD----------------------ILEGKPHGQLLKYD 205 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~----------------------~~~~~~~g~v~~~d 205 (372)
.+.+....+.. +.-...+. -+++||+.-....-.......+ .........+++||
T Consensus 98 W~~~~~~~p~~--r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 98 WVKLMSHAPMG--MAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp EEECSCCCSSC--CSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred EEECCCCCCcc--cccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 55443322111 12222333 6789998532100000000000 00001236799999
Q ss_pred CCCCeEEEEeCCccCc----ceEEEecCCCEEEEEeC------CCCeEEEEEc
Q 017371 206 PSSNITTLVADGFYFA----NGVALSRDEDYVVVCES------WKFRCRKYWL 248 (372)
Q Consensus 206 ~~t~~~~~~~~~~~~~----~gi~~~~dg~~l~v~~~------~~~~i~~~~~ 248 (372)
+.+.+.+.+... ..+ .+++.. ++.+|+..- ....++.|++
T Consensus 175 ~~~~~W~~~~~~-p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 175 PSTQQWSYAGES-PWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp TTTTEEEEEEEC-SSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEEC
T ss_pred CCCCcEEECCCC-CCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEe
Confidence 999988876432 211 223332 445887642 1345788876
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=91.41 E-value=2.8 Score=37.99 Aligned_cols=24 Identities=13% Similarity=0.363 Sum_probs=20.2
Q ss_pred CCCcEEEEecCCeEEEEe--CCceEE
Q 017371 88 KNGVIYTATRDGWIKRLQ--DGTWVN 111 (372)
Q Consensus 88 ~~G~l~v~~~~g~i~~~~--~g~~~~ 111 (372)
.+|.+|++..+|+++.++ +|+...
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEE
Confidence 578999999999999999 676543
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.36 E-value=14 Score=32.29 Aligned_cols=132 Identities=14% Similarity=0.246 Sum_probs=68.3
Q ss_pred EEEEe--CCceEEEEec-CCCcccCeEEcCCCCEEEEeCC--------CcEEEEc-CCC-cEEEeeecCCcccccccceE
Q 017371 101 IKRLQ--DGTWVNWKFI-DSQTLVGLTSTKEGHLIICDNA--------NGLHKVS-EDG-VENFLSYVNGSKLRFANDVV 167 (372)
Q Consensus 101 i~~~~--~g~~~~~~~~-~~~p~~gl~~d~dG~l~v~~~~--------~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~ 167 (372)
+++++ .++++..... ..+...+++.. ++.|||.... ..+.++| .++ .+.+.. .+.. +.-..++
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~--r~~~~~~ 155 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN-LPIK--VYGHNVI 155 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC-CSSC--EESCEEE
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC-CCCc--ccccEEE
Confidence 77888 5666654321 11212133333 6789887432 1367788 455 555432 1222 1222333
Q ss_pred EccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eEEEecCCCEEEEEeCC-----
Q 017371 168 EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GVALSRDEDYVVVCESW----- 239 (372)
Q Consensus 168 ~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi~~~~dg~~l~v~~~~----- 239 (372)
. -+|+||+.-.. . ........+++||+.+++.+.+.. +..+. +.+.. ++ .+|+..-.
T Consensus 156 ~-~~~~iyv~GG~------~-----~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~ 220 (318)
T 2woz_A 156 S-HNGMIYCLGGK------T-----DDKKCTNRVFIYNPKKGDWKDLAP-MKTPRSMFGVAIH-KG-KIVIAGGVTEDGL 220 (318)
T ss_dssp E-ETTEEEEECCE------E-----SSSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEEEEEETTEE
T ss_pred E-ECCEEEEEcCC------C-----CCCCccceEEEEcCCCCEEEECCC-CCCCcccceEEEE-CC-EEEEEcCcCCCCc
Confidence 3 67899984210 0 001124569999999998887643 22221 23332 34 57776421
Q ss_pred CCeEEEEEccCC
Q 017371 240 KFRCRKYWLKGE 251 (372)
Q Consensus 240 ~~~i~~~~~~g~ 251 (372)
...+++|++...
T Consensus 221 ~~~~~~yd~~~~ 232 (318)
T 2woz_A 221 SASVEAFDLKTN 232 (318)
T ss_dssp EEEEEEEETTTC
T ss_pred cceEEEEECCCC
Confidence 135788887653
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.42 E-value=18 Score=31.57 Aligned_cols=132 Identities=13% Similarity=0.159 Sum_probs=67.8
Q ss_pred EEEEe--CCceEEEEecC-CCcccCeEEcCCCCEEEEeCC---------CcEEEEc-CCC-cEEEeeecCCcccccccce
Q 017371 101 IKRLQ--DGTWVNWKFID-SQTLVGLTSTKEGHLIICDNA---------NGLHKVS-EDG-VENFLSYVNGSKLRFANDV 166 (372)
Q Consensus 101 i~~~~--~g~~~~~~~~~-~~p~~gl~~d~dG~l~v~~~~---------~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l 166 (372)
+++++ .++++...... .+...+++.. ++.|||.... ..+.++| .++ .+.+.. .+.. +.-...
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~--r~~~~~ 144 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP-LPYV--VYGHTV 144 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC-CSSC--CBSCEE
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC-CCCc--ccceeE
Confidence 77788 56665543211 1111133333 6788887531 2377888 455 554432 1221 122223
Q ss_pred EEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eEEEecCCCEEEEEeCCC---
Q 017371 167 VEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GVALSRDEDYVVVCESWK--- 240 (372)
Q Consensus 167 ~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi~~~~dg~~l~v~~~~~--- 240 (372)
+.-+++||+.-... ........+++||+.+.+.+.+.. +..+. ..+.. ++ .+|+..-.+
T Consensus 145 -~~~~~~iyv~GG~~-----------~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~ 209 (315)
T 4asc_A 145 -LSHMDLVYVIGGKG-----------SDRKCLNKMCVYDPKKFEWKELAP-MQTARSLFGATVH-DG-RIIVAAGVTDTG 209 (315)
T ss_dssp -EEETTEEEEECCBC-----------TTSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE-TT-EEEEEEEECSSS
T ss_pred -EEECCEEEEEeCCC-----------CCCcccceEEEEeCCCCeEEECCC-CCCchhceEEEEE-CC-EEEEEeccCCCC
Confidence 33578899852110 011234579999999888877643 22221 22222 44 577764221
Q ss_pred --CeEEEEEccCC
Q 017371 241 --FRCRKYWLKGE 251 (372)
Q Consensus 241 --~~i~~~~~~g~ 251 (372)
+.+++|++...
T Consensus 210 ~~~~~~~yd~~~~ 222 (315)
T 4asc_A 210 LTSSAEVYSITDN 222 (315)
T ss_dssp EEEEEEEEETTTT
T ss_pred ccceEEEEECCCC
Confidence 25888887653
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.05 E-value=3.5 Score=39.94 Aligned_cols=84 Identities=13% Similarity=0.092 Sum_probs=57.3
Q ss_pred eEEEEeCCC-----CeEEEEeCCccCcceEEEecCCCEEEEEeCCCCeEEEEEccC------CCC-cce-eeeccC-CCC
Q 017371 200 QLLKYDPSS-----NITTLVADGFYFANGVALSRDEDYVVVCESWKFRCRKYWLKG------ERK-GKL-ETFAEN-LPG 265 (372)
Q Consensus 200 ~v~~~d~~t-----~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~g------~~~-~~~-~~~~~~-~~g 265 (372)
++-.+|+.. .....+...-..|.|+.++|||++++++.-....+..|+.+- .++ ... ....+- +.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466777754 134444455678999999999999999999999999998752 111 111 111111 112
Q ss_pred CCceeEEcCCCCEEEEEe
Q 017371 266 APDNINLAPDGTFWIAII 283 (372)
Q Consensus 266 ~p~~i~~d~~G~lwva~~ 283 (372)
.|--.++|.+|+.|.+..
T Consensus 379 GPlHt~Fd~~G~aYTtlf 396 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLF 396 (638)
T ss_dssp CEEEEEECSSSEEEEEET
T ss_pred cccEEEECCCCceEeeee
Confidence 478899999999999985
No 337
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=84.37 E-value=20 Score=32.78 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=62.6
Q ss_pred ecCCCEEEEEeCCCC--eEEEEEccCCCCcceeeeccCCC---CCCc-eeEEcCCCCEEEEEecCchhHHHHhhcchhHH
Q 017371 227 SRDEDYVVVCESWKF--RCRKYWLKGERKGKLETFAENLP---GAPD-NINLAPDGTFWIAIIKLDARRMKILNSSKLIK 300 (372)
Q Consensus 227 ~~dg~~l~v~~~~~~--~i~~~~~~g~~~~~~~~~~~~~~---g~p~-~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~r 300 (372)
+.+..+|+..+...+ .|..|+++..+....-.+-...| +.+. ++.+-.+..||+.+..
T Consensus 36 ~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~---------------- 99 (369)
T 3s9j_A 36 ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNN---------------- 99 (369)
T ss_dssp ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGG----------------
T ss_pred cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCC----------------
Confidence 334468888887777 99999998654443322221111 2342 3656678889999876
Q ss_pred HHHHhcCccccccccCCCceEEEEECCCCcEEEEEECCCCC-eecc-------ceeeEEECCEEEEEeC
Q 017371 301 HVLAAYPKLFSQFITLGGGAHLIHVAEDGTIIRNLVDPTGQ-LMSF-------VTSGLQVDNHLYVISL 361 (372)
Q Consensus 301 ~~~~~~p~~~~~~~~~~~~~~v~~~~~~g~~~~~~~~~~g~-~~~~-------~t~~~~~~g~L~igs~ 361 (372)
..+|+.+|.+|+++..+.-.... .+.. -.-+...++.|+++..
T Consensus 100 ------------------~~~i~l~n~~G~~~~k~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~ 150 (369)
T 3s9j_A 100 ------------------ISRLSSINSQGEIIRNYNFQTPEGRFTPLSFGSYYNAPAFIKDSCIFLRQE 150 (369)
T ss_dssp ------------------GTEEEEECTTCCEEEEEECCCTTSCCCCCCCBTTTTBCCEEETTEEEEECC
T ss_pred ------------------cceEEEECCCceEEEEEecCCCccccccccccccccCcceecCceEEEecc
Confidence 35899999999999887553321 1221 1233445667887643
No 338
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=83.91 E-value=26 Score=32.17 Aligned_cols=167 Identities=11% Similarity=0.074 Sum_probs=86.8
Q ss_pred CCccEEEcCCCcEEEEe-cCCeEEEEe--CCc---------eE--EEEecCCCcccCeEEcCCC-CEEEEeCCCcEEEEc
Q 017371 80 HPEDASMDKNGVIYTAT-RDGWIKRLQ--DGT---------WV--NWKFIDSQTLVGLTSTKEG-HLIICDNANGLHKVS 144 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~-~~g~i~~~~--~g~---------~~--~~~~~~~~p~~gl~~d~dG-~l~v~~~~~gv~~~~ 144 (372)
....+++.+.+.++++. .+ .+..++ +.+ .+ ......+ +. .+++ || .|+|+ .+.+|..++
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~-~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VI-FVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EE-EEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-ee-EEEE--CCCEEEEE-cCCcEEEEE
Confidence 45668888766665554 55 466576 211 11 1222233 77 9999 55 56776 456788888
Q ss_pred -CCC--cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCc
Q 017371 145 -EDG--VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA 221 (372)
Q Consensus 145 -~~g--~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~ 221 (372)
.+- ..... .... ..+++..-+. ++.+. ..+|.|+.+|.++++.+.+. ...
T Consensus 113 v~sl~~~~~~~-~~~~----~v~~i~~~~p-~~av~------------------~~dG~L~v~dl~~~~~~~~~---~~V 165 (388)
T 1xip_A 113 LEELSEFRTVT-SFEK----PVFQLKNVNN-TLVIL------------------NSVNDLSALDLRTKSTKQLA---QNV 165 (388)
T ss_dssp SSSTTCEEEEE-ECSS----CEEEEEECSS-EEEEE------------------ETTSEEEEEETTTCCEEEEE---ESE
T ss_pred chhhhccCccc-eeec----ceeeEEecCC-CEEEE------------------ECCCCEEEEEccCCcccccc---CCc
Confidence 332 11111 1110 1123222221 23332 24678888888766655433 244
Q ss_pred ceEEEecCCCEEEEEeCCCCeEEEEEccCCCCcceeeec------cC--CCCCCceeEEcCCCCEEEEE
Q 017371 222 NGVALSRDEDYVVVCESWKFRCRKYWLKGERKGKLETFA------EN--LPGAPDNINLAPDGTFWIAI 282 (372)
Q Consensus 222 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~g~~~~~~~~~~------~~--~~g~p~~i~~d~~G~lwva~ 282 (372)
..++|+|+| +.+. ..++.+..|.+++........+. +. ....+..|..-+++.+.++-
T Consensus 166 s~v~WSpkG--~~vg-~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 166 TSFDVTNSQ--LAVL-LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEECSSE--EEEE-ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred eEEEEcCCc--eEEE-EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 579999999 3333 34566888887664321122221 10 11234556667766555543
No 339
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=83.11 E-value=22 Score=30.67 Aligned_cols=142 Identities=13% Similarity=0.135 Sum_probs=74.2
Q ss_pred CCcEEEEec------CCeEEEEe--CCceEEEEecC-CCcccCeEEcCCCCEEEEeCC------CcEEEEc-CCC-cEEE
Q 017371 89 NGVIYTATR------DGWIKRLQ--DGTWVNWKFID-SQTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-VENF 151 (372)
Q Consensus 89 ~G~l~v~~~------~g~i~~~~--~g~~~~~~~~~-~~p~~gl~~d~dG~l~v~~~~------~gv~~~~-~~g-~~~l 151 (372)
++.||+... ...++++| .++++...... .+...+.+. -++.||+.... ..+.++| .++ .+.+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 190 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV 190 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeC
Confidence 678887641 23588888 66777665322 222212333 36889987432 3478888 555 5555
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eEEEec
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GVALSR 228 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi~~~~ 228 (372)
... +.. +.-..++ .-+++||+.-... .......+++||+++++.+.+.. +..+. +.+..
T Consensus 191 ~~~-p~~--r~~~~~~-~~~~~i~v~GG~~------------~~~~~~~v~~yd~~~~~W~~~~~-~p~~r~~~~~~~~- 252 (301)
T 2vpj_A 191 TPM-ATK--RSGAGVA-LLNDHIYVVGGFD------------GTAHLSSVEAYNIRTDSWTTVTS-MTTPRCYVGATVL- 252 (301)
T ss_dssp CCC-SSC--CBSCEEE-EETTEEEEECCBC------------SSSBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-
T ss_pred CCC-Ccc--cccceEE-EECCEEEEEeCCC------------CCcccceEEEEeCCCCcEEECCC-CCCcccceeEEEE-
Confidence 322 211 1112222 2468899852210 01114579999999998887643 22221 22222
Q ss_pred CCCEEEEEeCCC-----CeEEEEEccC
Q 017371 229 DEDYVVVCESWK-----FRCRKYWLKG 250 (372)
Q Consensus 229 dg~~l~v~~~~~-----~~i~~~~~~g 250 (372)
++ .+|+..-.+ ..+++|++..
T Consensus 253 ~~-~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 253 RG-RLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp TT-EEEEECCBCSSSBEEEEEEEETTT
T ss_pred CC-EEEEEcCcCCCcccccEEEEcCCC
Confidence 33 476664221 3466666543
No 340
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=82.50 E-value=21 Score=36.09 Aligned_cols=151 Identities=11% Similarity=0.031 Sum_probs=78.4
Q ss_pred ccEEEcC--CCcEEEEecCCeEEEEe-CC-ceEEEEecCC----CcccCeEEcC--CCCEEEEeCCCcEEEEcCCC--cE
Q 017371 82 EDASMDK--NGVIYTATRDGWIKRLQ-DG-TWVNWKFIDS----QTLVGLTSTK--EGHLIICDNANGLHKVSEDG--VE 149 (372)
Q Consensus 82 ~~i~~d~--~G~l~v~~~~g~i~~~~-~g-~~~~~~~~~~----~p~~gl~~d~--dG~l~v~~~~~gv~~~~~~g--~~ 149 (372)
..|++|+ .+.+|+++ +|.|++-. .| .++.+..... ... -|.+.+ +++||++....+|++-+..| .+
T Consensus 591 ~~i~~d~~~~~~~y~g~-~g~v~~S~DgG~tW~~~~~~lp~~~~~~~-~i~~~~~~~~~l~~~~~~~~l~~S~D~G~tW~ 668 (763)
T 3a0f_A 591 TGIAADRVQANTFYVYV-EGDFFVSTDGGKSYTKKGNGLPCCWTYTG-TPVTSNLRAGELWVSVKGVGIYHSTDFGNTFT 668 (763)
T ss_dssp SCEEECSSSTTCEEEEE-TTEEEEESSTTSBCEEECBTSCCSSCCCE-EEEECSSSTTCEEEEETTTEEEEESSTTSBCE
T ss_pred ceEEEeccCCCEEEEEc-CCCEEEEeCCCcCccccccCCCcccCccc-cEEECCCCCCcEEEEcCCCeEEEEcCCCCCce
Confidence 3677775 45799985 67788776 33 4655532211 111 155554 67899998766788876555 55
Q ss_pred EEeeecCCcccc--cccceEEc-c-CCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeC---CccCcc
Q 017371 150 NFLSYVNGSKLR--FANDVVEA-S-DGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVAD---GFYFAN 222 (372)
Q Consensus 150 ~l~~~~~~~~~~--~~~~l~~d-~-dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~---~~~~~~ 222 (372)
.+.. .+..... .-.+++.. . ...||+.-.. .....+.||+=+-.....+.+.+ .+..+.
T Consensus 669 ~~~~-~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~-------------~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~ 734 (763)
T 3a0f_A 669 ALAG-SGSSLNPAVFSIGAPQTPNATETLFLWGIP-------------SASQPEGLYMSTDNGGLWTRLNDDAHNYGGAT 734 (763)
T ss_dssp ECTT-BTTTBEEEEEEEECCSSTTSSCEEEEEEEC-------------STTSCSEEEEESSTTSCCEECSCTTCCTBCEE
T ss_pred EccC-CCcccccceeEEeeecCCCCCceEEEEEEc-------------ccCCCcEEEEeCCCCCCcEeccCccccCCCcc
Confidence 5431 1111000 00122222 2 3468874200 01135678877644445555542 222233
Q ss_pred eEEEecCC-CEEEEEeCCCCeEEEEEcc
Q 017371 223 GVALSRDE-DYVVVCESWKFRCRKYWLK 249 (372)
Q Consensus 223 gi~~~~dg-~~l~v~~~~~~~i~~~~~~ 249 (372)
.++++|.. ..||++.. +..|+.-++.
T Consensus 735 ~i~~~p~~~~~v~~~T~-GrGi~~g~~~ 761 (763)
T 3a0f_A 735 VISGDPRIYGRVYIGMN-GRGIICAQAL 761 (763)
T ss_dssp EEEECTTSTTEEEEEEB-SSCEEEEESC
T ss_pred eEEeCCCCCCEEEEeCC-CCeEEEEecC
Confidence 46777743 35777654 4457665543
No 341
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=81.74 E-value=26 Score=30.54 Aligned_cols=136 Identities=14% Similarity=0.012 Sum_probs=69.5
Q ss_pred CeEEEEe--CCceEEEEecC--CCcccCeEEcCCCCEEEEeCC--------C----cEEEEc-CCC-cEEEeeecCCccc
Q 017371 99 GWIKRLQ--DGTWVNWKFID--SQTLVGLTSTKEGHLIICDNA--------N----GLHKVS-EDG-VENFLSYVNGSKL 160 (372)
Q Consensus 99 g~i~~~~--~g~~~~~~~~~--~~p~~gl~~d~dG~l~v~~~~--------~----gv~~~~-~~g-~~~l~~~~~~~~~ 160 (372)
..++++| .+++.....+. .+...+++ ..++.||+.... . -+.++| .++ .+.+.. .+..
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~-- 88 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLV-TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP-LPSP-- 88 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEE-CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC-BSSC--
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEE-EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC-CCcc--
Confidence 4688888 66666522221 22221223 347888887541 0 166777 445 544432 1222
Q ss_pred ccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eEEEecCCCEEEEEe
Q 017371 161 RFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GVALSRDEDYVVVCE 237 (372)
Q Consensus 161 ~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi~~~~dg~~l~v~~ 237 (372)
+.-..++. -+++||+.-.. ... ........+++||+.+++.+.+.. +..+. ..+. -++ .+|+..
T Consensus 89 r~~~~~~~-~~~~lyv~GG~------~~~---~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~G 155 (315)
T 4asc_A 89 RCLFGLGE-ALNSIYVVGGR------EIK---DGERCLDSVMCYDRLSFKWGESDP-LPYVVYGHTVLS-HMD-LVYVIG 155 (315)
T ss_dssp EESCEEEE-ETTEEEEECCE------ESS---TTCCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEE-ETT-EEEEEC
T ss_pred hhceeEEE-ECCEEEEEeCC------cCC---CCCcccceEEEECCCCCcEeECCC-CCCcccceeEEE-ECC-EEEEEe
Confidence 12223333 37889985210 000 001234569999999888877543 22221 2222 334 588775
Q ss_pred CC------CCeEEEEEccCC
Q 017371 238 SW------KFRCRKYWLKGE 251 (372)
Q Consensus 238 ~~------~~~i~~~~~~g~ 251 (372)
-. .+.+++|++...
T Consensus 156 G~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTT
T ss_pred CCCCCCcccceEEEEeCCCC
Confidence 32 246899998653
No 342
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=80.85 E-value=27 Score=30.28 Aligned_cols=133 Identities=17% Similarity=0.204 Sum_probs=68.5
Q ss_pred CeEEEEe--CCceEEEEec-CCCcccCeEEcCCCCEEEEeCC----------CcEEEEc-CCC-cEEEeeecCCcccccc
Q 017371 99 GWIKRLQ--DGTWVNWKFI-DSQTLVGLTSTKEGHLIICDNA----------NGLHKVS-EDG-VENFLSYVNGSKLRFA 163 (372)
Q Consensus 99 g~i~~~~--~g~~~~~~~~-~~~p~~gl~~d~dG~l~v~~~~----------~gv~~~~-~~g-~~~l~~~~~~~~~~~~ 163 (372)
..+++++ .++++..... ..+...+++. -++.||+.... ..+.++| .++ .+.+... +.. +.-
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~--r~~ 114 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPM-SVP--RNR 114 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCC-SSC--CBT
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCC-CcC--ccc
Confidence 3577888 5666654321 1121213333 36788887432 2477788 445 4544321 211 111
Q ss_pred cceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eEEEecCCCEEEEEeCC-
Q 017371 164 NDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GVALSRDEDYVVVCESW- 239 (372)
Q Consensus 164 ~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi~~~~dg~~l~v~~~~- 239 (372)
..++. -+|+||+.-.. ........+++||+.+++.+.+.. +..+. ..+.. ++.+|+..-.
T Consensus 115 ~~~~~-~~~~iyv~GG~------------~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~iyv~GG~~ 178 (308)
T 1zgk_A 115 IGVGV-IDGHIYAVGGS------------HGCIHHNSVERYEPERDEWHLVAP-MLTRRIGVGVAVL--NRLLYAVGGFD 178 (308)
T ss_dssp CEEEE-ETTEEEEECCE------------ETTEECCCEEEEETTTTEEEECCC-CSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred cEEEE-ECCEEEEEcCC------------CCCcccccEEEECCCCCeEeECCC-CCccccceEEEEE--CCEEEEEeCCC
Confidence 22333 47889985210 001123469999999888877643 22221 22332 3458887421
Q ss_pred ----CCeEEEEEccCC
Q 017371 240 ----KFRCRKYWLKGE 251 (372)
Q Consensus 240 ----~~~i~~~~~~g~ 251 (372)
.+.+++|++...
T Consensus 179 ~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 179 GTNRLNSAECYYPERN 194 (308)
T ss_dssp SSCBCCCEEEEETTTT
T ss_pred CCCcCceEEEEeCCCC
Confidence 246899998653
No 343
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=80.52 E-value=35 Score=31.30 Aligned_cols=127 Identities=9% Similarity=0.107 Sum_probs=75.0
Q ss_pred CCccEEEcCCCcEEEEecCCeEEEEe-CC--ceEEEEecCCCcccCeEEcCCCCEEEEeCCCcEEEEc-CCC-cEEEeee
Q 017371 80 HPEDASMDKNGVIYTATRDGWIKRLQ-DG--TWVNWKFIDSQTLVGLTSTKEGHLIICDNANGLHKVS-EDG-VENFLSY 154 (372)
Q Consensus 80 ~p~~i~~d~~G~l~v~~~~g~i~~~~-~g--~~~~~~~~~~~p~~gl~~d~dG~l~v~~~~~gv~~~~-~~g-~~~l~~~ 154 (372)
.+..+++ .+..|+++ .+|.|..|+ .. +............ .+..-+. ++.++.....|+.++ .++ ...+.
T Consensus 89 ~V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~-~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~~~-- 162 (388)
T 1xip_A 89 DVIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVF-QLKNVNN-TLVILNSVNDLSALDLRTKSTKQLA-- 162 (388)
T ss_dssp TEEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEE-EEEECSS-EEEEEETTSEEEEEETTTCCEEEEE--
T ss_pred CeeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCccceeeccee-eEEecCC-CEEEEECCCCEEEEEccCCcccccc--
Confidence 4788999 44578888 778899998 22 1111111111223 4444432 366666656677777 555 43321
Q ss_pred cCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeE---EEEe------C---CccCcc
Q 017371 155 VNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNIT---TLVA------D---GFYFAN 222 (372)
Q Consensus 155 ~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~---~~~~------~---~~~~~~ 222 (372)
..+..+++.++| +.++ ..+|.+..|++++++. ..+. + +-....
T Consensus 163 ------~~Vs~v~WSpkG-~~vg------------------~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~ 217 (388)
T 1xip_A 163 ------QNVTSFDVTNSQ-LAVL------------------LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPL 217 (388)
T ss_dssp ------ESEEEEEECSSE-EEEE------------------ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEE
T ss_pred ------CCceEEEEcCCc-eEEE------------------EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEE
Confidence 245688999999 4443 2456777778877774 2331 1 223456
Q ss_pred eEEEecCCCEEEEEe
Q 017371 223 GVALSRDEDYVVVCE 237 (372)
Q Consensus 223 gi~~~~dg~~l~v~~ 237 (372)
.|.|.+++.++.+..
T Consensus 218 sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 218 SVTILSPQDFLAVFG 232 (388)
T ss_dssp EEEESSSSEEEEEEE
T ss_pred EEEEecCCeEEEEEc
Confidence 788888887666543
No 344
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=80.35 E-value=53 Score=33.24 Aligned_cols=150 Identities=10% Similarity=0.136 Sum_probs=79.2
Q ss_pred CCcccCeEEcCC--CCEEEEeCCCcEEEEcCCC--cEEEeeecCCc--ccccccceEEccC--CcEEEEeCCCCCCCccc
Q 017371 117 SQTLVGLTSTKE--GHLIICDNANGLHKVSEDG--VENFLSYVNGS--KLRFANDVVEASD--GSLYFTVSSSKYLPHEY 188 (372)
Q Consensus 117 ~~p~~gl~~d~d--G~l~v~~~~~gv~~~~~~g--~~~l~~~~~~~--~~~~~~~l~~d~d--G~i~vtd~~~~~~~~~~ 188 (372)
++.. +|+++|. +.+|++....+|++-+..| .+.+....... ....+..|++|+. +.+|++.... .
T Consensus 15 g~i~-~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~--~---- 87 (789)
T 1sqj_A 15 GYIT-GIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRY--V---- 87 (789)
T ss_dssp SCEE-EEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSC--T----
T ss_pred CcEE-EEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCcc--C----
Confidence 4556 8999874 6789887667888887555 44432211100 1235678899874 5788864210 0
Q ss_pred ccccccccCCCeEEEEeCCCCeEEEEeCCccC---------cceEEEecC-CCEEEEEeCCCCeEEEEEccCCCCcceee
Q 017371 189 CLDILEGKPHGQLLKYDPSSNITTLVADGFYF---------ANGVALSRD-EDYVVVCESWKFRCRKYWLKGERKGKLET 258 (372)
Q Consensus 189 ~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~---------~~gi~~~~d-g~~l~v~~~~~~~i~~~~~~g~~~~~~~~ 258 (372)
....+.|++=+-.....+.+...+.. ...++++|. .+.+|+.. ....|++ ..++.+.-+ .
T Consensus 88 ------~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~-S~DgG~TW~--~ 157 (789)
T 1sqj_A 88 ------GDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWK-SSDRAKTWT--N 157 (789)
T ss_dssp ------TSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEE-ESSTTSSCE--E
T ss_pred ------CCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-ccCCEEE-ECCCCcccC--C
Confidence 00116777765443455555432221 135888875 34566643 3345664 334433222 1
Q ss_pred eccCCC------CCCceeEEcCC--CCEEEEEec
Q 017371 259 FAENLP------GAPDNINLAPD--GTFWIAIIK 284 (372)
Q Consensus 259 ~~~~~~------g~p~~i~~d~~--G~lwva~~~ 284 (372)
.. ..+ .....+.+|+. +.+|++...
T Consensus 158 ~~-~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 158 VT-SIPDAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp ET-TSCCCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred Cc-cCccccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 11 111 11234666753 478888753
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=79.37 E-value=31 Score=30.03 Aligned_cols=134 Identities=10% Similarity=0.105 Sum_probs=68.2
Q ss_pred eEEEEe--CCceEEEEecC--CCcccCeEEcCCCCEEEEeCC----Cc--------EEEEc-CCC-cEEEeeecCCcccc
Q 017371 100 WIKRLQ--DGTWVNWKFID--SQTLVGLTSTKEGHLIICDNA----NG--------LHKVS-EDG-VENFLSYVNGSKLR 161 (372)
Q Consensus 100 ~i~~~~--~g~~~~~~~~~--~~p~~gl~~d~dG~l~v~~~~----~g--------v~~~~-~~g-~~~l~~~~~~~~~~ 161 (372)
.+.++| .+++....... .+.. .-+...++.||+.... .+ +.++| .++ .+.+.. .+.. +
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~--r 100 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNH-SSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP-LPSA--R 100 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSE-EEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC-BSSC--B
T ss_pred ceEEECCCCCceecccCCccCCccc-eEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC-CCcc--c
Confidence 377888 56666532221 2222 2223357889987541 01 66777 445 444422 1222 1
Q ss_pred cccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCc---ceEEEecCCCEEEEEeC
Q 017371 162 FANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCES 238 (372)
Q Consensus 162 ~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~---~gi~~~~dg~~l~v~~~ 238 (372)
.-..++. -+++||+.-... .........+++||+.+.+.+.+.. +..+ ...+. -++ .+|+..-
T Consensus 101 ~~~~~~~-~~~~iyv~GG~~----------~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG 166 (318)
T 2woz_A 101 CLFGLGE-VDDKIYVVAGKD----------LQTEASLDSVLCYDPVAAKWSEVKN-LPIKVYGHNVIS-HNG-MIYCLGG 166 (318)
T ss_dssp CSCEEEE-ETTEEEEEEEEB----------TTTCCEEEEEEEEETTTTEEEEECC-CSSCEESCEEEE-ETT-EEEEECC
T ss_pred cccceEE-ECCEEEEEcCcc----------CCCCcccceEEEEeCCCCCEeECCC-CCCcccccEEEE-ECC-EEEEEcC
Confidence 2223333 378899852100 0001123569999999998887642 2222 12222 344 5887653
Q ss_pred C------CCeEEEEEccCC
Q 017371 239 W------KFRCRKYWLKGE 251 (372)
Q Consensus 239 ~------~~~i~~~~~~g~ 251 (372)
. .+.+++|++...
T Consensus 167 ~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 167 KTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EESSSCBCCCEEEEETTTT
T ss_pred CCCCCCccceEEEEcCCCC
Confidence 1 245899998653
No 346
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=76.88 E-value=36 Score=29.36 Aligned_cols=135 Identities=13% Similarity=0.106 Sum_probs=71.5
Q ss_pred CCeEEEEe--CCceEEEEecC-CCcccCeEEcCCCCEEEEeCC-----CcEEEEc-CCC-cEEEeeecCCcccccccceE
Q 017371 98 DGWIKRLQ--DGTWVNWKFID-SQTLVGLTSTKEGHLIICDNA-----NGLHKVS-EDG-VENFLSYVNGSKLRFANDVV 167 (372)
Q Consensus 98 ~g~i~~~~--~g~~~~~~~~~-~~p~~gl~~d~dG~l~v~~~~-----~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~ 167 (372)
...++++| .++++...... .+...+++. -++.|||.... ..+.++| .++ .+.+... +..+ .-..++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r--~~~~~~ 98 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP-PTPR--DSLAAC 98 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC-SSCC--BSCEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC-Cccc--cceeEE
Confidence 34688888 56666553321 121212333 36788887431 3577888 555 5555332 2211 112222
Q ss_pred EccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eEEEecCCCEEEEEeCC-----
Q 017371 168 EASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GVALSRDEDYVVVCESW----- 239 (372)
Q Consensus 168 ~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi~~~~dg~~l~v~~~~----- 239 (372)
.-+++||+.-.. + ........+++||+.+++.+.+.. +..+. ..+. -++ .+|+..-.
T Consensus 99 -~~~~~iyv~GG~------~-----~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 99 -AAEGKIYTSGGS------E-----VGNSALYLFECYDTRTESWHTKPS-MLTQRCSHGMVE-ANG-LIYVCGGSLGNNV 163 (306)
T ss_dssp -EETTEEEEECCB------B-----TTBSCCCCEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETT-EEEEECCEESCTT
T ss_pred -EECCEEEEECCC------C-----CCCcEeeeEEEEeCCCCceEeCCC-CcCCcceeEEEE-ECC-EEEEECCCCCCCC
Confidence 347889985211 0 011234569999999988877643 22221 2222 244 58876521
Q ss_pred ----CCeEEEEEccCC
Q 017371 240 ----KFRCRKYWLKGE 251 (372)
Q Consensus 240 ----~~~i~~~~~~g~ 251 (372)
.+.+++|++...
T Consensus 164 ~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATE 179 (306)
T ss_dssp TCEECCCEEEEETTTT
T ss_pred cccccceEEEeCCCCC
Confidence 356889998653
No 347
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=71.51 E-value=50 Score=28.55 Aligned_cols=143 Identities=14% Similarity=0.205 Sum_probs=75.3
Q ss_pred CCcEEEEe-c---------CCeEEEEe--CCceEEEEec-CCCcccCeEEcCCCCEEEEeCC------CcEEEEc-CCC-
Q 017371 89 NGVIYTAT-R---------DGWIKRLQ--DGTWVNWKFI-DSQTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG- 147 (372)
Q Consensus 89 ~G~l~v~~-~---------~g~i~~~~--~g~~~~~~~~-~~~p~~gl~~d~dG~l~v~~~~------~gv~~~~-~~g- 147 (372)
++.||+-. . ...++++| +++++..... ..+...+++. -+|.|||.... ..+.++| .++
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 56777753 1 13578888 5666654321 1122212333 36889987431 2477888 455
Q ss_pred cEEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eE
Q 017371 148 VENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GV 224 (372)
Q Consensus 148 ~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi 224 (372)
.+.+... +.. +.-...++ -+++||+.-.. ........+++||+.+.+.+.+.. +..+. ..
T Consensus 149 W~~~~~~-p~~--r~~~~~~~-~~~~iyv~GG~------------~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~ 211 (308)
T 1zgk_A 149 WHLVAPM-LTR--RIGVGVAV-LNRLLYAVGGF------------DGTNRLNSAECYYPERNEWRMITA-MNTIRSGAGV 211 (308)
T ss_dssp EEECCCC-SSC--CBSCEEEE-ETTEEEEECCB------------CSSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEE
T ss_pred EeECCCC-Ccc--ccceEEEE-ECCEEEEEeCC------------CCCCcCceEEEEeCCCCeEeeCCC-CCCccccceE
Confidence 5544321 211 12223333 37889985211 001124569999999888877642 22221 23
Q ss_pred EEecCCCEEEEEeCC-----CCeEEEEEccCC
Q 017371 225 ALSRDEDYVVVCESW-----KFRCRKYWLKGE 251 (372)
Q Consensus 225 ~~~~dg~~l~v~~~~-----~~~i~~~~~~g~ 251 (372)
+.. ++.+|+..-. ...+++|++...
T Consensus 212 ~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 212 CVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 332 3458887532 256999998653
No 348
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=68.77 E-value=44 Score=33.47 Aligned_cols=118 Identities=7% Similarity=0.017 Sum_probs=65.4
Q ss_pred CcccCeEEcCC--CCEEEEeCCCcEEEEcCCC--cEEEeeecCCc--ccccccceEEcc--CCcEEEEeCCCCCCCcccc
Q 017371 118 QTLVGLTSTKE--GHLIICDNANGLHKVSEDG--VENFLSYVNGS--KLRFANDVVEAS--DGSLYFTVSSSKYLPHEYC 189 (372)
Q Consensus 118 ~p~~gl~~d~d--G~l~v~~~~~gv~~~~~~g--~~~l~~~~~~~--~~~~~~~l~~d~--dG~i~vtd~~~~~~~~~~~ 189 (372)
+.. +|+++++ +.+|++....||++-+..| .+.+....... ....+..|++|+ .+.+|++....... +
T Consensus 24 ~i~-~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~---~- 98 (737)
T 2cn3_A 24 FMP-GIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTND---W- 98 (737)
T ss_dssp CCC-EEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSS---S-
T ss_pred eee-EEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccc---c-
Confidence 566 8999876 6899987567899988555 45432211101 123466899997 35899875320000 0
Q ss_pred cccccccCCCeEEEEeCCCCeEEEEeCCcc---------CcceEEEecC-CCEEEEEeCCCCeEEE
Q 017371 190 LDILEGKPHGQLLKYDPSSNITTLVADGFY---------FANGVALSRD-EDYVVVCESWKFRCRK 245 (372)
Q Consensus 190 ~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~---------~~~gi~~~~d-g~~l~v~~~~~~~i~~ 245 (372)
....++||+=+-.....+.+..... ....++++|. .+.+|+....+..|++
T Consensus 99 -----~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~ 159 (737)
T 2cn3_A 99 -----LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWR 159 (737)
T ss_dssp -----SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEE
T ss_pred -----ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEE
Confidence 0113567766433344555443221 1146888875 3557766422245664
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=67.65 E-value=1e+02 Score=30.58 Aligned_cols=146 Identities=10% Similarity=0.055 Sum_probs=74.1
Q ss_pred CeEEcCCCCEEEEeCC-----CcEEEEc-CCC-cEEEeeecC---CcccccccceEEcc-CCcEEEEeCCCCCCCccccc
Q 017371 122 GLTSTKEGHLIICDNA-----NGLHKVS-EDG-VENFLSYVN---GSKLRFANDVVEAS-DGSLYFTVSSSKYLPHEYCL 190 (372)
Q Consensus 122 gl~~d~dG~l~v~~~~-----~gv~~~~-~~g-~~~l~~~~~---~~~~~~~~~l~~d~-dG~i~vtd~~~~~~~~~~~~ 190 (372)
|.+..-++.|||.... ..+.++| .++ .+.+....+ ....+.-..++.-. +|+||+.-.. .
T Consensus 391 g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~------~--- 461 (695)
T 2zwa_A 391 GDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGR------K--- 461 (695)
T ss_dssp CEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCB------S---
T ss_pred eEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCC------C---
Confidence 4443356788887542 2378888 555 665541110 11112233445544 8899995211 0
Q ss_pred ccccccCCCeEEEEeCCCCeEEEEeCCccCc---ceEEEecCCCEEEEEeCCC--CeEEEEEccCCCCcceeeecc--CC
Q 017371 191 DILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSRDEDYVVVCESWK--FRCRKYWLKGERKGKLETFAE--NL 263 (372)
Q Consensus 191 ~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~---~gi~~~~dg~~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~--~~ 263 (372)
........+++||+.+.+++.+.. +..| ...+.-.+++ +|+..-.. ..+++|++...+ ...... ..
T Consensus 462 --~~~~~~~dv~~yd~~t~~W~~~~~-~p~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~---W~~~~~~g~~ 534 (695)
T 2zwa_A 462 --APHQGLSDNWIFDMKTREWSMIKS-LSHTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEEI---FKDVTPKDEF 534 (695)
T ss_dssp --STTCBCCCCEEEETTTTEEEECCC-CSBCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTTE---EEECCCSSGG
T ss_pred --CCCCccccEEEEeCCCCcEEECCC-CCCCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCCc---eEEccCCCCC
Confidence 000123468999999888877642 2222 1233323555 77764321 168999986532 211111 01
Q ss_pred C--CC-CceeEEcCC-CCEEEEEe
Q 017371 264 P--GA-PDNINLAPD-GTFWIAII 283 (372)
Q Consensus 264 ~--g~-p~~i~~d~~-G~lwva~~ 283 (372)
+ .. ...+.++.+ |.|||-..
T Consensus 535 p~~r~~~~a~v~~~~~~~iyv~GG 558 (695)
T 2zwa_A 535 FQNSLVSAGLEFDPVSKQGIILGG 558 (695)
T ss_dssp GGSCCBSCEEEEETTTTEEEEECC
T ss_pred CCcccceeEEEEeCCCCEEEEECC
Confidence 1 11 122555655 78888754
No 350
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=67.53 E-value=59 Score=27.85 Aligned_cols=132 Identities=11% Similarity=0.086 Sum_probs=68.4
Q ss_pred eEEEEe--CCceEEEEec-CCCcccCeEEcCCCCEEEEeCC------CcEEEEc-CCC-cEEEeeecCCcccccccceEE
Q 017371 100 WIKRLQ--DGTWVNWKFI-DSQTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-VENFLSYVNGSKLRFANDVVE 168 (372)
Q Consensus 100 ~i~~~~--~g~~~~~~~~-~~~p~~gl~~d~dG~l~v~~~~------~gv~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~ 168 (372)
.+.+++ .++++..... ..+...+++.. ++.||+.... ..+.++| .++ .+.+... +.. +.-..+++
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~--r~~~~~~~ 106 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANM-RDR--RSTLGAAV 106 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCC-SSC--CBSCEEEE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCCC-Ccc--ccceEEEE
Confidence 467777 5556554321 11211133333 6788887432 2478888 555 5555432 221 12223333
Q ss_pred ccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eEEEecCCCEEEEEeCC------
Q 017371 169 ASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GVALSRDEDYVVVCESW------ 239 (372)
Q Consensus 169 d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi~~~~dg~~l~v~~~~------ 239 (372)
-+|+||+.-.. ........+++||+.+++.+.+.. +..+. ..+.. ++ .+|+..-.
T Consensus 107 -~~~~iyv~GG~------------~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~ 170 (302)
T 2xn4_A 107 -LNGLLYAVGGF------------DGSTGLSSVEAYNIKSNEWFHVAP-MNTRRSSVGVGVV-GG-LLYAVGGYDVASRQ 170 (302)
T ss_dssp -ETTEEEEEEEE------------CSSCEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEEE-TT-EEEEECCEETTTTE
T ss_pred -ECCEEEEEcCC------------CCCccCceEEEEeCCCCeEeecCC-CCCcccCceEEEE-CC-EEEEEeCCCCCCCc
Confidence 47889984210 001123468999999998887643 22221 22222 34 58886421
Q ss_pred -CCeEEEEEccCC
Q 017371 240 -KFRCRKYWLKGE 251 (372)
Q Consensus 240 -~~~i~~~~~~g~ 251 (372)
.+.+++|++...
T Consensus 171 ~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 171 CLSTVECYNATTN 183 (302)
T ss_dssp ECCCEEEEETTTT
T ss_pred cccEEEEEeCCCC
Confidence 245889998653
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=65.57 E-value=43 Score=32.54 Aligned_cols=71 Identities=15% Similarity=0.081 Sum_probs=48.7
Q ss_pred eEecCCCCCCCccEEEcCCCcEEEEe--cCCeEEEEe-C-------Cce-------EEEEecCCCcccCeEEcCCCCEEE
Q 017371 71 IKVGEGSVNHPEDASMDKNGVIYTAT--RDGWIKRLQ-D-------GTW-------VNWKFIDSQTLVGLTSTKEGHLII 133 (372)
Q Consensus 71 ~~~~~g~~~~p~~i~~d~~G~l~v~~--~~g~i~~~~-~-------g~~-------~~~~~~~~~p~~gl~~d~dG~l~v 133 (372)
..++.. ..|+++-++|||.-.+++ .+..+..++ + +++ ..-...+-.|+ ..+||++|+.|.
T Consensus 317 ~~iP~p--ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPl-Ht~Fd~~G~aYT 393 (638)
T 3sbq_A 317 RYVPVP--KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPL-HTTFDGRGNAYT 393 (638)
T ss_dssp EEEEES--SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEE-EEEECSSSEEEE
T ss_pred EEEeCC--CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCccc-EEEECCCCceEe
Confidence 445554 489999999999555444 567788887 2 221 11123456788 999999999998
Q ss_pred EeC-CCcEEEEc
Q 017371 134 CDN-ANGLHKVS 144 (372)
Q Consensus 134 ~~~-~~gv~~~~ 144 (372)
+-. .+.+.+++
T Consensus 394 tlfidSqvvkWn 405 (638)
T 3sbq_A 394 TLFIDSQVVKWN 405 (638)
T ss_dssp EETTTTEEEEEE
T ss_pred eeeecceEEEEe
Confidence 853 36788887
No 352
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=62.42 E-value=73 Score=27.15 Aligned_cols=143 Identities=17% Similarity=0.187 Sum_probs=77.3
Q ss_pred CCcEEEEe-c-----CCeEEEEe--CCc---eEEEEec-CCCcccCeEEcCCCCEEEEeCC------CcEEEEc-CCC-c
Q 017371 89 NGVIYTAT-R-----DGWIKRLQ--DGT---WVNWKFI-DSQTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-V 148 (372)
Q Consensus 89 ~G~l~v~~-~-----~g~i~~~~--~g~---~~~~~~~-~~~p~~gl~~d~dG~l~v~~~~------~gv~~~~-~~g-~ 148 (372)
++.||+-. . ...+++++ +++ ++..... ..+...+.+. -++.||+.... ..+.++| .++ .
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 56777753 1 24588998 566 7766432 1222212333 36889988532 2477888 555 5
Q ss_pred EEEeeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eEE
Q 017371 149 ENFLSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GVA 225 (372)
Q Consensus 149 ~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi~ 225 (372)
+.+... +.. +.-...++ -+++||+.-.. ........+++||+.+++.+.+.. +..+. .++
T Consensus 141 ~~~~~~-p~~--r~~~~~~~-~~~~iyv~GG~------------~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~ 203 (301)
T 2vpj_A 141 SMLGDM-QTA--REGAGLVV-ASGVIYCLGGY------------DGLNILNSVEKYDPHTGHWTNVTP-MATKRSGAGVA 203 (301)
T ss_dssp EEEEEC-SSC--CBSCEEEE-ETTEEEEECCB------------CSSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEE
T ss_pred EECCCC-CCC--cccceEEE-ECCEEEEECCC------------CCCcccceEEEEeCCCCcEEeCCC-CCcccccceEE
Confidence 555432 221 11222333 47889985211 001124569999999998887642 22221 222
Q ss_pred EecCCCEEEEEeCC-----CCeEEEEEccCC
Q 017371 226 LSRDEDYVVVCESW-----KFRCRKYWLKGE 251 (372)
Q Consensus 226 ~~~dg~~l~v~~~~-----~~~i~~~~~~g~ 251 (372)
.. + +.+|+..-. .+.+++|++...
T Consensus 204 ~~-~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 204 LL-N-DHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EE-T-TEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EE-C-CEEEEEeCCCCCcccceEEEEeCCCC
Confidence 22 3 458877532 246899998653
No 353
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=62.22 E-value=75 Score=27.20 Aligned_cols=147 Identities=13% Similarity=0.138 Sum_probs=76.8
Q ss_pred CCcEEEEe-----cCCeEEEEe--CCceEEEEecC-CCcccCeEEcCCCCEEEEeCC-------CcEEEEc-CCC-cEEE
Q 017371 89 NGVIYTAT-----RDGWIKRLQ--DGTWVNWKFID-SQTLVGLTSTKEGHLIICDNA-------NGLHKVS-EDG-VENF 151 (372)
Q Consensus 89 ~G~l~v~~-----~~g~i~~~~--~g~~~~~~~~~-~~p~~gl~~d~dG~l~v~~~~-------~gv~~~~-~~g-~~~l 151 (372)
++.||+.. ....+++++ .++++...... .+...+.+. -++.|||.... ..+.++| .++ .+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 56777653 235688888 66777664321 121202222 36889887432 2378888 455 5555
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCc---ceEEEec
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFA---NGVALSR 228 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~---~gi~~~~ 228 (372)
... +.. +.-..+ +.-+|+||+.-.... ..........+++||+.+++.+.+.. +..+ ..++..
T Consensus 134 ~~~-p~~--r~~~~~-~~~~~~iyv~GG~~~--------~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~- 199 (306)
T 3ii7_A 134 PSM-LTQ--RCSHGM-VEANGLIYVCGGSLG--------NNVSGRVLNSCEVYDPATETWTELCP-MIEARKNHGLVFV- 199 (306)
T ss_dssp CCC-SSC--CBSCEE-EEETTEEEEECCEES--------CTTTCEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-
T ss_pred CCC-cCC--cceeEE-EEECCEEEEECCCCC--------CCCcccccceEEEeCCCCCeEEECCC-ccchhhcceEEEE-
Confidence 322 211 111222 334789998522100 00000014569999999998887653 2222 123333
Q ss_pred CCCEEEEEeCC-----CCeEEEEEccCC
Q 017371 229 DEDYVVVCESW-----KFRCRKYWLKGE 251 (372)
Q Consensus 229 dg~~l~v~~~~-----~~~i~~~~~~g~ 251 (372)
++ .+|+..-. ...+++|++...
T Consensus 200 ~~-~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 200 KD-KIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TT-EEEEECCEETTEEBCCEEEEETTTT
T ss_pred CC-EEEEEeCCCCCCCCceEEEeeCCCC
Confidence 34 58877421 246889998653
No 354
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=59.16 E-value=93 Score=27.31 Aligned_cols=97 Identities=15% Similarity=0.109 Sum_probs=50.0
Q ss_pred ceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCC--CeEEEEeCCcc-Ccc---eEEEecCCCEEEEEeC
Q 017371 165 DVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSS--NITTLVADGFY-FAN---GVALSRDEDYVVVCES 238 (372)
Q Consensus 165 ~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t--~~~~~~~~~~~-~~~---gi~~~~dg~~l~v~~~ 238 (372)
..++--+++||+.- +.....+++||+.+ .+.+.+.. +. .+. +++.. + +.+|+..-
T Consensus 13 ~~~~~~~~~iyv~G----------------G~~~~~~~~~d~~~~~~~W~~~~~-~p~~~R~~~~~~~~-~-~~lyv~GG 73 (357)
T 2uvk_A 13 GTGAIDNDTVYIGL----------------GSAGTAWYKLDTQAKDKKWTALAA-FPGGPRDQATSAFI-D-GNLYVFGG 73 (357)
T ss_dssp CEEEEETTEEEEEC----------------GGGTTCEEEEETTSSSCCEEECCC-CTTCCCBSCEEEEE-T-TEEEEECC
T ss_pred eEEEEECCEEEEEe----------------CcCCCeEEEEccccCCCCeeECCC-CCCCcCccceEEEE-C-CEEEEEcC
Confidence 33443478999941 11234699999974 66666543 22 221 23322 3 45887643
Q ss_pred C----------CCeEEEEEccCCCCcceeeeccCC-CCC-CceeEEcCCCCEEEEEec
Q 017371 239 W----------KFRCRKYWLKGERKGKLETFAENL-PGA-PDNINLAPDGTFWIAIIK 284 (372)
Q Consensus 239 ~----------~~~i~~~~~~g~~~~~~~~~~~~~-~g~-p~~i~~d~~G~lwva~~~ 284 (372)
. .+.+++|++... ......... ... -...+. -+|.|||-...
T Consensus 74 ~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~ 127 (357)
T 2uvk_A 74 IGKNSEGLTQVFNDVHKYNPKTN---SWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGV 127 (357)
T ss_dssp EEECTTSCEEECCCEEEEETTTT---EEEECSCCCSSCCSSEEEEE-ETTEEEEEECC
T ss_pred CCCCCCccceeeccEEEEeCCCC---cEEECCCCCCcccccceEEE-ECCEEEEEeCc
Confidence 2 245889987643 222222111 111 112333 67789887653
No 355
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=52.53 E-value=87 Score=31.10 Aligned_cols=110 Identities=15% Similarity=0.162 Sum_probs=50.3
Q ss_pred eEEcCCCCEEEEeCCCcEEEEcCCC--cEEEeeecCCcccccccceEEccC--CcEEEEeCCCCCCCcccccccccccCC
Q 017371 123 LTSTKEGHLIICDNANGLHKVSEDG--VENFLSYVNGSKLRFANDVVEASD--GSLYFTVSSSKYLPHEYCLDILEGKPH 198 (372)
Q Consensus 123 l~~d~dG~l~v~~~~~gv~~~~~~g--~~~l~~~~~~~~~~~~~~l~~d~d--G~i~vtd~~~~~~~~~~~~~~~~~~~~ 198 (372)
++-+++..+|+.....||++-+..| .+.+..............|+++|. +++|++.... .....
T Consensus 50 lt~~~~~~~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~------------~~~~~ 117 (685)
T 3f6k_A 50 LTTFHVPLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVS------------GGSRG 117 (685)
T ss_dssp EEEECCCC-----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCC------------TTCSS
T ss_pred EccCCCCceEEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEecc------------CCCCC
Confidence 3333444444444345677776555 555543222222223457899873 3788864210 01125
Q ss_pred CeEEEEeCCCCeEEEEeCCccCcceEEEecCC-CEEEEEeCCCCeEEE
Q 017371 199 GQLLKYDPSSNITTLVADGFYFANGVALSRDE-DYVVVCESWKFRCRK 245 (372)
Q Consensus 199 g~v~~~d~~t~~~~~~~~~~~~~~gi~~~~dg-~~l~v~~~~~~~i~~ 245 (372)
+.||+=+-....++.+.........++++|.. +.+|+.. ....|++
T Consensus 118 g~v~rS~DgG~TW~~~~~p~~~~~~l~~~P~~~~~l~a~~-~~~gly~ 164 (685)
T 3f6k_A 118 GRIFRSSDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALS-TENGLWV 164 (685)
T ss_dssp CEEEEESSTTSSCEEEECSSCBSSCCEEETTEEEEEEEEB-TTCCEEE
T ss_pred ceEEEECCCCceeEeccCCCCCceEEEEecCCCCEEEEEE-CCCCEEE
Confidence 67776553333455543222211246777643 3344443 2334554
No 356
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=47.46 E-value=1.3e+02 Score=25.52 Aligned_cols=145 Identities=12% Similarity=0.148 Sum_probs=75.9
Q ss_pred CCcEEEEe-c-----CCeEEEEe--CCceEEEEecC-CCcccCeEEcCCCCEEEEeCC------CcEEEEc-CCC-cEEE
Q 017371 89 NGVIYTAT-R-----DGWIKRLQ--DGTWVNWKFID-SQTLVGLTSTKEGHLIICDNA------NGLHKVS-EDG-VENF 151 (372)
Q Consensus 89 ~G~l~v~~-~-----~g~i~~~~--~g~~~~~~~~~-~~p~~gl~~d~dG~l~v~~~~------~gv~~~~-~~g-~~~l 151 (372)
++.||+-. . ...++++| .++++...... .+...+.+. -+|.|||.... ..+.++| .++ .+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 56788753 1 23588888 66776654321 121213333 36888887432 1366777 455 5554
Q ss_pred eeecCCcccccccceEEccCCcEEEEeCCCCCCCcccccccccccCCCeEEEEeCCCCeEEEEeCCccCcc---eEEEec
Q 017371 152 LSYVNGSKLRFANDVVEASDGSLYFTVSSSKYLPHEYCLDILEGKPHGQLLKYDPSSNITTLVADGFYFAN---GVALSR 228 (372)
Q Consensus 152 ~~~~~~~~~~~~~~l~~d~dG~i~vtd~~~~~~~~~~~~~~~~~~~~g~v~~~d~~t~~~~~~~~~~~~~~---gi~~~~ 228 (372)
... +.. +.-..+++ -+++||+.-.. .. ........+++||+.+++.+.+.. +..+. .++..
T Consensus 140 ~~~-p~~--r~~~~~~~-~~~~iyv~GG~-----~~-----~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~- 203 (302)
T 2xn4_A 140 APM-NTR--RSSVGVGV-VGGLLYAVGGY-----DV-----ASRQCLSTVECYNATTNEWTYIAE-MSTRRSGAGVGVL- 203 (302)
T ss_dssp CCC-SSC--CBSCEEEE-ETTEEEEECCE-----ET-----TTTEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-
T ss_pred CCC-CCc--ccCceEEE-ECCEEEEEeCC-----CC-----CCCccccEEEEEeCCCCcEEECCC-CccccccccEEEE-
Confidence 322 221 12222332 47889985210 00 000113569999999998887643 22221 22222
Q ss_pred CCCEEEEEeCC-----CCeEEEEEccCC
Q 017371 229 DEDYVVVCESW-----KFRCRKYWLKGE 251 (372)
Q Consensus 229 dg~~l~v~~~~-----~~~i~~~~~~g~ 251 (372)
+ +.+|+..-. .+.+++|++...
T Consensus 204 ~-~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 204 N-NLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp T-TEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred C-CEEEEECCCCCCcccceEEEEeCCCC
Confidence 3 458887532 246899998653
No 357
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=38.52 E-value=2.8e+02 Score=26.77 Aligned_cols=45 Identities=13% Similarity=0.130 Sum_probs=27.9
Q ss_pred CCCcEEEEecCCeEEEEe-CCce-EEEEecCC---CcccCeEEcCCCCEEEE
Q 017371 88 KNGVIYTATRDGWIKRLQ-DGTW-VNWKFIDS---QTLVGLTSTKEGHLIIC 134 (372)
Q Consensus 88 ~~G~l~v~~~~g~i~~~~-~g~~-~~~~~~~~---~p~~gl~~d~dG~l~v~ 134 (372)
++|.+.++.. .+++.+| .|++ ..+..+.+ ..+ .+...++|++++.
T Consensus 216 ~nG~l~~g~G-~~i~elD~~Gkvv~~~~lp~g~~~~HH-D~~~l~nGn~Lv~ 265 (571)
T 3elq_A 216 PRGTFTAVQG-QHWYEFDMMGQVLEDHKLPRGFADATH-ESIETPNGTVLLR 265 (571)
T ss_dssp TTSCEEEEEB-TEEEEECTTCCEEEEEECCTTEECBCS-CEEECTTSCEEEE
T ss_pred CCCCEEEecC-cEEEEECCCCcEEEEEECCCCcccccc-ceEEcCCCcEEEE
Confidence 5777777653 3588888 7764 33333322 234 6778889987764
No 358
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=32.50 E-value=3.5e+02 Score=26.10 Aligned_cols=56 Identities=13% Similarity=0.150 Sum_probs=34.3
Q ss_pred CeEEcCCCCEEEEeCCCcEEEEcCCCcEEEeeecCCcccccccceEEccCCcEEEEe
Q 017371 122 GLTSTKEGHLIICDNANGLHKVSEDGVENFLSYVNGSKLRFANDVVEASDGSLYFTV 178 (372)
Q Consensus 122 gl~~d~dG~l~v~~~~~gv~~~~~~g~~~l~~~~~~~~~~~~~~l~~d~dG~i~vtd 178 (372)
+..-.++|.+.+... .+++.+|..|..+.....++.....-+++...++|++++..
T Consensus 211 ~~~g~~nG~l~~g~G-~~i~elD~~Gkvv~~~~lp~g~~~~HHD~~~l~nGn~Lv~v 266 (571)
T 3elq_A 211 GIRETPRGTFTAVQG-QHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRV 266 (571)
T ss_dssp EEEECTTSCEEEEEB-TEEEEECTTCCEEEEEECCTTEECBCSCEEECTTSCEEEEE
T ss_pred EEEecCCCCEEEecC-cEEEEECCCCcEEEEEECCCCccccccceEEcCCCcEEEEE
Confidence 444557888877753 56899997772222122232222344678888999988853
No 359
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=29.06 E-value=4.3e+02 Score=26.14 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=21.1
Q ss_pred CeEEEEeCCCCeEEEEeCCccCc------------ceEEEecCCCEEEEE
Q 017371 199 GQLLKYDPSSNITTLVADGFYFA------------NGVALSRDEDYVVVC 236 (372)
Q Consensus 199 g~v~~~d~~t~~~~~~~~~~~~~------------~gi~~~~dg~~l~v~ 236 (372)
..+..+|..|+++ +.+++. | .+++|. |++.+|++
T Consensus 156 ~~~~~~d~~t~~~--~~~~~~-~~~k~~~~~~~~~~~~~W~-d~~~~~~~ 201 (711)
T 4hvt_A 156 MFFREWDLEKKDF--VKNGFE-PITNSGKLLEGKFTYPTWI-NKDTIIFN 201 (711)
T ss_dssp EEEEEEETTTTEE--CTTCSC-CBCTTCCBCCEETCCEEEE-ETTEEEEC
T ss_pred eEEEEEECCcCCc--CCCCcc-cccccccccccccceeeEE-CCCEEEEE
Confidence 3567788887765 345555 3 345776 55567775
No 360
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=20.79 E-value=2.4e+02 Score=26.99 Aligned_cols=62 Identities=11% Similarity=0.231 Sum_probs=39.2
Q ss_pred ccEEEcCCC---cEEEEecCCeEEEEe---CCc----eEEEEe-cCCCccc-CeEEcCCC-CEEEEeCCCcEEEEc
Q 017371 82 EDASMDKNG---VIYTATRDGWIKRLQ---DGT----WVNWKF-IDSQTLV-GLTSTKEG-HLIICDNANGLHKVS 144 (372)
Q Consensus 82 ~~i~~d~~G---~l~v~~~~g~i~~~~---~g~----~~~~~~-~~~~p~~-gl~~d~dG-~l~v~~~~~gv~~~~ 144 (372)
..|+++..+ -+|+|+.+|+|+++. +.. .+.+.- ..+.|.. .|.+++++ .|||+. ..+|.++.
T Consensus 403 T~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s-~~~V~kvp 477 (539)
T 3al9_A 403 TSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMS-ERQVTRVP 477 (539)
T ss_dssp EEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEEC-SSEEEEEE
T ss_pred EEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEe-ccccceee
Confidence 346666433 588999999999987 221 222221 2245643 78888765 588875 46788886
Done!