BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017373
(372 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 166/309 (53%), Gaps = 27/309 (8%)
Query: 84 HGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEA 143
+G S+ GRR EMEDAV + Q FFGVYDGHGG++VA
Sbjct: 11 YGFTSICGRRPEMEDAVST-IPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANY 69
Query: 144 CKERMHEVLVEVIAGEEY----GEKNIE-WERVMEGCFGKMDEEVNRGRLREEMVGSTXX 198
C+ERMH L E IA E+ G+ +E W++ + F ++D E+ + E VGST
Sbjct: 70 CRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTSV 127
Query: 199 XXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRI 258
NCGDSRAVL RG +PLSVDHKPDR DE R+EAAGG+VI WNG R+
Sbjct: 128 VAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARV 187
Query: 259 LGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRC 318
GVLA SRSIGD+YLKP +I P+V +R D+ LILASDG+WDV+++E AC++ R+
Sbjct: 188 FGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARK- 246
Query: 319 FSGRIKWASSVNA---------------GNQNPXXXXXXXXXXXXISRGSSDNISVIVVE 363
RI NA G I RGS DNISV+VV+
Sbjct: 247 ---RILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVD 303
Query: 364 LNKPTKFNS 372
L K S
Sbjct: 304 LKPRRKLKS 312
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/309 (42%), Positives = 166/309 (53%), Gaps = 27/309 (8%)
Query: 84 HGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEA 143
+G S+ GRR EMEDAV + Q FFGVYDGHGG++VA
Sbjct: 14 YGFTSICGRRPEMEDAVST-IPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANY 72
Query: 144 CKERMHEVLVEVIAGEEY----GEKNIE-WERVMEGCFGKMDEEVNRGRLREEMVGSTXX 198
C+ERMH L E IA E+ G+ +E W++ + F ++D E+ + E VGST
Sbjct: 73 CRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIES--VAPETVGSTSV 130
Query: 199 XXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRI 258
NCGDSRAVL RG +PLSVDHKPDR DE R+EAAGG+VI WNG R+
Sbjct: 131 VAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARV 190
Query: 259 LGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRC 318
GVLA SRSIGD+YLKP +I P+V +R D+ LILASDG+WDV+++E AC++ R+
Sbjct: 191 FGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARK- 249
Query: 319 FSGRIKWASSVNA---------------GNQNPXXXXXXXXXXXXISRGSSDNISVIVVE 363
RI NA G I RGS DNISV+VV+
Sbjct: 250 ---RILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVD 306
Query: 364 LNKPTKFNS 372
L K S
Sbjct: 307 LKPRRKLKS 315
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 133/315 (42%), Positives = 171/315 (54%), Gaps = 28/315 (8%)
Query: 75 RTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDG 134
R + ++ +G S+ GRR EMEDAV + Q FFGVYDG
Sbjct: 17 RGSHMSVPLYGFTSICGRRPEMEDAVST-IPRFLQSSSGSMLDGRFDPQSAAHFFGVYDG 75
Query: 135 HGGARVAEACKERMHEVLVEVIAGEEY----GEKNIE-WERVMEGCFGKMDEEVNRGRLR 189
HGG++VA C+ERMH L E IA E+ G+ +E W++ + F ++D E+ +
Sbjct: 76 HGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIES--VA 133
Query: 190 EEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGR 249
E VGST NCGDSRAVL RG +PLSVDHKPDR DE R+EAAGG+
Sbjct: 134 PETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGK 193
Query: 250 VINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNE 309
VI WNG R+ GVLA SRSIGD+YLKP +I P+V +R D+ LILASDG+WDV+++E
Sbjct: 194 VIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDE 253
Query: 310 AACQVVRRCFSGRIKWASSVNA---------------GNQNPXXXXXXXXXXXXISRGSS 354
AC++ R+ RI NA G I RGS
Sbjct: 254 EACEMARK----RILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSK 309
Query: 355 DNISVIVVELNKPTK 369
DNISV+VV+L KP +
Sbjct: 310 DNISVVVVDL-KPRR 323
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 161/307 (52%), Gaps = 18/307 (5%)
Query: 84 HGTMSVIGRRKEMEDAVRV---ELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARV 140
+G S+ GRR EMED+V L FFGVYDGHGG++V
Sbjct: 14 YGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQV 73
Query: 141 AEACKERMHEVLVEVIAGE--EYGEKNI---EWERVMEGCFGKMDEEVNRGRLREEMVGS 195
A C+ERMH L E I E E+ + + +W++ + F ++D E+ E VGS
Sbjct: 74 ANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVAHAPETVGS 133
Query: 196 TXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNG 255
T NCGDSRAVL RG + LSVDHKPDR DE R+EAAGG+VI WNG
Sbjct: 134 TSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNG 193
Query: 256 PRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVV 315
R+ GVLA SRSIGD+YLKP VI P+V R D+ LILASDGLWDV++NE C +
Sbjct: 194 ARVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLA 253
Query: 316 RR---------CFSGRIKWASSVNAGNQNPXXXXXX-XXXXXXISRGSSDNISVIVVELN 365
R+ +G + ++P + +GS DNISV+VV+L
Sbjct: 254 RKRILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSKDNISVVVVDLK 313
Query: 366 KPTKFNS 372
KF S
Sbjct: 314 GIRKFKS 320
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 174/343 (50%), Gaps = 38/343 (11%)
Query: 65 ENYDVLEKKARTNTVTCLS-HGTMSVIGRRKEMEDAVRVELGCMXXXXXXXX----XXXX 119
EN + L K + C+ GT+S+ G R EMEDA V +
Sbjct: 2 ENSNHLVKGRSVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSP 61
Query: 120 XXXQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVI--AGEEYGEKN------IEWERV 171
FFGVYDGHGG +VA+ C++R+H L E I +E ++N ++W++V
Sbjct: 62 SLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKV 121
Query: 172 MEGCFGKMDEEVNR--GR------------LREEMVGSTXXXXXXXXXXXXXXNCGDSRA 217
CF +D E+ GR + E VGST NCGDSRA
Sbjct: 122 FTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRA 181
Query: 218 VLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFV 277
VL RG +PLSVDHKPDR DE R+E AGG+VI W G R+ GVLA SRSIGD+YLKP+V
Sbjct: 182 VLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYV 241
Query: 278 ISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNA------ 331
I +P+V RS DE LILASDGLWDV++N+ C++ RR + W A
Sbjct: 242 IPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRI---LMWHKKNGAPPLAER 298
Query: 332 --GNQNPXXXXXXXXXXXXISRGSSDNISVIVVELNKPTKFNS 372
G + +GS DNIS+IV++L KF +
Sbjct: 299 GKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKFKT 341
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 166/322 (51%), Gaps = 37/322 (11%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 20 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 79
Query: 141 AEACKERMHEVLVEVIA--GEEYGEKN------IEWERVMEGCFGKMDEEVNR--GR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 80 ADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 139
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 140 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 199
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILA 298
E R+E AGG+VI W G R+ GVLA SRSIGD+YLKP+VI +P+V RS DE LILA
Sbjct: 200 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILA 259
Query: 299 SDGLWDVVSNEAACQVVRRCFSGRIKWASSVNA--------GNQNPXXXXXXXXXXXXIS 350
SDGLWDV++N+ C++ RR + W A G +
Sbjct: 260 SDGLWDVMNNQEVCEIARRRI---LMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQ 316
Query: 351 RGSSDNISVIVVELNKPTKFNS 372
+GS DNIS+IV++L KF +
Sbjct: 317 KGSKDNISIIVIDLKAQRKFKT 338
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 166/322 (51%), Gaps = 37/322 (11%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 30 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 89
Query: 141 AEACKERMHEVLVEVI--AGEEYGEKN------IEWERVMEGCFGKMDEEVNR--GR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 90 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 149
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 150 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 209
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILA 298
E R+E AGG+VI W G R+ GVLA SRSIGD+YLKP+VI +P+V RS DE LILA
Sbjct: 210 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILA 269
Query: 299 SDGLWDVVSNEAACQVVRRCFSGRIKWASSVNA--------GNQNPXXXXXXXXXXXXIS 350
SDGLWDV++N+ C++ RR + W A G +
Sbjct: 270 SDGLWDVMNNQEVCEIARRRI---LMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQ 326
Query: 351 RGSSDNISVIVVELNKPTKFNS 372
+GS DNIS+IV++L KF +
Sbjct: 327 KGSKDNISIIVIDLKAQRKFKT 348
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 166/322 (51%), Gaps = 37/322 (11%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 17 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 76
Query: 141 AEACKERMHEVLVEVI--AGEEYGEKN------IEWERVMEGCFGKMDEEVNR--GR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 77 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 136
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 137 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 196
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILA 298
E R+E AGG+VI W G R+ GVLA SRSIGD+YLKP+VI +P+V RS DE LILA
Sbjct: 197 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILA 256
Query: 299 SDGLWDVVSNEAACQVVRRCFSGRIKWASSVNA--------GNQNPXXXXXXXXXXXXIS 350
SDGLWDV++N+ C++ RR + W A G +
Sbjct: 257 SDGLWDVMNNQEVCEIARRRI---LMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQ 313
Query: 351 RGSSDNISVIVVELNKPTKFNS 372
+GS DNIS+IV++L KF +
Sbjct: 314 KGSKDNISIIVIDLKAQRKFKT 335
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/322 (39%), Positives = 166/322 (51%), Gaps = 37/322 (11%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 21 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 80
Query: 141 AEACKERMHEVLVEVI--AGEEYGEKN------IEWERVMEGCFGKMDEEVNR--GR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 81 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 140
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 141 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 200
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILA 298
E R+E AGG+VI W G R+ GVLA SRSIGD+YLKP+VI +P+V RS DE LILA
Sbjct: 201 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILA 260
Query: 299 SDGLWDVVSNEAACQVVRRCFSGRIKWASSVNA--------GNQNPXXXXXXXXXXXXIS 350
SDGLWDV++N+ C++ RR + W A G +
Sbjct: 261 SDGLWDVMNNQEVCEIARRRI---LMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQ 317
Query: 351 RGSSDNISVIVVELNKPTKFNS 372
+GS DNIS+IV++L KF +
Sbjct: 318 KGSKDNISIIVIDLKAQRKFKT 339
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 164/319 (51%), Gaps = 37/319 (11%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXX----XXXXXXQKKYDFFGVYDGHGGARV 140
GT+S+ G R EMEDA V + FFGVYDGHGG +V
Sbjct: 6 GTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKV 65
Query: 141 AEACKERMHEVLVEVI--AGEEYGEKN------IEWERVMEGCFGKMDEEVNR--GR--- 187
A+ C++R+H L E I +E ++N ++W++V CF +D E+ GR
Sbjct: 66 ADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVV 125
Query: 188 ---------LREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHD 238
+ E VGST NCGDSRAVL RG +PLSVDHKPDR D
Sbjct: 126 GSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDRED 185
Query: 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILA 298
E R+E AGG+VI W G R+ GVLA SRSIGD+YLKP+VI +P+V RS DE LILA
Sbjct: 186 EYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILA 245
Query: 299 SDGLWDVVSNEAACQVVRRCFSGRIKWASSVNA--------GNQNPXXXXXXXXXXXXIS 350
SDGLWDV++N+ C++ RR + W A G +
Sbjct: 246 SDGLWDVMNNQEVCEIARRRI---LMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQ 302
Query: 351 RGSSDNISVIVVELNKPTK 369
+GS DNIS+IV++L K
Sbjct: 303 KGSKDNISIIVIDLKAQRK 321
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 119/254 (46%), Gaps = 35/254 (13%)
Query: 82 LSHGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVA 141
L +G S+ G R EMEDA +G + + FF VYDGH G+RVA
Sbjct: 24 LRYGLSSMQGWRVEMEDAHTAVVG-------------IPHGLEDWSFFAVYDGHAGSRVA 70
Query: 142 EACKERMHEVLVEV----IAGEEYGEKNIEWERVMEGC---FGKMDEEV-NRGRLREEM- 192
C + E + AG+ + E V G F K+DE + N LR M
Sbjct: 71 NYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMD 130
Query: 193 -VGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVI 251
GST NCGDSRAVL R G V + DHKP E R++ AGG V+
Sbjct: 131 RSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVM 190
Query: 252 NWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERSDRDEFLILASDGL 302
R+ G LA SR++GD K V +P+V R++ DEF+ILA DG+
Sbjct: 191 I---QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILAXDGI 247
Query: 303 WDVVSNEAACQVVR 316
WDV+SNE C+ V+
Sbjct: 248 WDVMSNEELCEYVK 261
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 33/216 (15%)
Query: 128 FFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGR 187
FF VYDGHGGA VA+ C + L V E YG K E+E+ ++ F D + + +
Sbjct: 53 FFAVYDGHGGAEVAQYCSLHLPTFLKTV---EAYGRK--EFEKALKEAFLGFDATLLQEK 107
Query: 188 LREEM-----------------VGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSV 230
+ EE+ G T N GDSR V+ R G + +S
Sbjct: 108 VIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSF 167
Query: 231 DHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKP 281
DHKP+ E R+E AGGRV +G R+ G L SR+IGD K + + P
Sbjct: 168 DHKPEDTVEYQRIEKAGGRV-TLDG-RVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALP 225
Query: 282 DVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRR 317
D+ DEF++LA DG+W+ +++E Q V+
Sbjct: 226 DIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQE 261
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 122/267 (45%), Gaps = 41/267 (15%)
Query: 70 LEKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFF 129
+EK L +G S+ G R EMEDA +G + + FF
Sbjct: 10 MEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGL-------------ESWSFF 56
Query: 130 GVYDGHGGARVAEACKERMHEVLVEVIAGEEY----GEKNIEWERVMEGC---FGKMDEE 182
VYDGH G++VA+ C E + L + +++ G ++E V G F ++DE
Sbjct: 57 AVYDGHAGSQVAKYCCEHL---LDHITNNQDFKGSAGAPSVE--NVKNGIRTGFLEIDEH 111
Query: 183 V---NRGRLREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDE 239
+ + + + GST NCGDSR +L R V + DHKP E
Sbjct: 112 MRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLE 171
Query: 240 LIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERSD 290
R++ AGG V+ R+ G LA SR++GD K V +P+V ERS+
Sbjct: 172 KERIQNAGGSVMIQ---RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSE 228
Query: 291 RD-EFLILASDGLWDVVSNEAACQVVR 316
D +F+ILA DG+WDV+ NE C VR
Sbjct: 229 EDDQFIILACDGIWDVMGNEELCDFVR 255
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 138/313 (44%), Gaps = 53/313 (16%)
Query: 70 LEKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFF 129
+EK L +G S+ G R EMEDA +G + + FF
Sbjct: 10 MEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGL-------------ESWSFF 56
Query: 130 GVYDGHGGARVAEACKERMHEVLVEVIAGEEY----GEKNIEWERVMEGC---FGKMDEE 182
VYDGH G++VA+ C E + L + +++ G ++E V G F ++DE
Sbjct: 57 AVYDGHAGSQVAKYCCEHL---LDHITNNQDFKGSAGAPSVE--NVKNGIRTGFLEIDEH 111
Query: 183 V---NRGRLREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDE 239
+ + + + GST NCGDSR +L R V + DHKP E
Sbjct: 112 MRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLE 171
Query: 240 LIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERSD 290
R++ AGG V+ R+ G LA SR++GD K V +P+V ERS+
Sbjct: 172 KERIQNAGGSVMIQ---RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSE 228
Query: 291 RD-EFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPXXXXXXXXXXXXI 349
D +F+ILA DG+WDV+ NE C VR R++ + +
Sbjct: 229 EDDQFIILACDGIWDVMGNEELCDFVR----SRLEVTDDLE--------KVCNEVVDTCL 276
Query: 350 SRGSSDNISVIVV 362
+GS DN+SVI++
Sbjct: 277 YKGSRDNMSVILI 289
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 35/245 (14%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEAC 144
G S IG+RKE ED R + + +F VYDGHGG A+ C
Sbjct: 125 GCASQIGKRKENED--RFDFAQLTDEVL---------------YFAVYDGHGGPAAADFC 167
Query: 145 KERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVN-RGRLREEMV----GSTXXX 199
M + +++++ E KN+E ++ F ++D+ + RL + G+T
Sbjct: 168 HTHMEKCIMDLLPKE----KNLE--TLLTLAFLEIDKAFSSHARLSADATLLTSGTTATV 221
Query: 200 XXXXX-XXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNG--- 255
+ GDSRA+L R G + L++DH P+R DE R++ GG + WN
Sbjct: 222 ALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQ 280
Query: 256 PRILGVLATSRSIGDQYLKPF-VISKPDVM-VTERSDRDEFLILASDGLWDVVSNEAACQ 313
P + G LA +RSIGD LK VI++P+ + D FL+L +DG+ +V+++ C
Sbjct: 281 PHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICD 340
Query: 314 VVRRC 318
V +C
Sbjct: 341 FVNQC 345
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 118/245 (48%), Gaps = 35/245 (14%)
Query: 85 GTMSVIGRRKEMEDAVRVELGCMXXXXXXXXXXXXXXXQKKYDFFGVYDGHGGARVAEAC 144
G S IG+RKE ED R + + +F VYDGHGG A+ C
Sbjct: 11 GCASQIGKRKENED--RFDFAQLTDEVL---------------YFAVYDGHGGPAAADFC 53
Query: 145 KERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVN-RGRLREEMV----GSTXXX 199
M + +++++ E KN+E ++ F ++D+ + RL + G+T
Sbjct: 54 HTHMEKCIMDLLPKE----KNLE--TLLTLAFLEIDKAFSSHARLSADATLLTSGTTATV 107
Query: 200 XXXXX-XXXXXXNCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNG--- 255
+ GDSRA+L R G + L++DH P+R DE R++ GG + WN
Sbjct: 108 ALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQ 166
Query: 256 PRILGVLATSRSIGDQYLKPF-VISKPDVM-VTERSDRDEFLILASDGLWDVVSNEAACQ 313
P + G LA +RSIGD LK VI++P+ + D FL+L +DG+ +V+++ C
Sbjct: 167 PHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICD 226
Query: 314 VVRRC 318
V +C
Sbjct: 227 FVNQC 231
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 109/282 (38%), Gaps = 57/282 (20%)
Query: 128 FFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGE---KNIEWERVMEGCFGKMDEEVN 184
FFGV+DG G +E K+ + L+ A +E E ++ V E +D+ V+
Sbjct: 55 FFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEXLRSDVPATEVDEKLPQLLDQAVD 114
Query: 185 RG-------------RLREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGVVVP---- 227
+L ++ ST + GDSR GV P
Sbjct: 115 DXYKNADNELVKXCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAX---GVETPNGLN 171
Query: 228 ---LSVDHKPDRHDELIRVEAAGGRV----INWNGPRILG--------------VLATSR 266
L+VDHKPD E +R+ GG V + N P I G L SR
Sbjct: 172 CEFLTVDHKPDXPHEKLRIXRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPXQLQYSR 231
Query: 267 SIGDQYLKPFVIS-KPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKW 325
+ G + LK + +S +PDV V + + ILA+DGLWDV S A ++
Sbjct: 232 AFGGKDLKXYGLSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVEI----------- 280
Query: 326 ASSVNAGNQNPXXXXXXXXXXXXISRG-SSDNISVIVVELNK 366
A +NP SR S+DNI+ V K
Sbjct: 281 AXQARQEGRNPAQALVEXTLAEQQSRNQSADNITAXTVFFKK 322
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 211 NCGDSRAVL--SRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSI 268
N GDSRA L S GG+ LS DHKP+ E R+E AGG V ++ PR+ GVLA SR+
Sbjct: 179 NIGDSRATLIHSDGGLTR-LSKDHKPNHPTEASRIEKAGGSVETFDVPRVDGVLALSRAF 237
Query: 269 GDQYLK 274
GD K
Sbjct: 238 GDSDFK 243
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 105/306 (34%), Gaps = 117/306 (38%)
Query: 128 FFGVYDGHGGARVAEACKERM----------HEVLVEVIAGEEYGEKNIE---------- 167
GV+DGH G ++A ER+ HE L+E+ E G +
Sbjct: 68 LLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPND 127
Query: 168 -----------------WERVME----------------GCFGKMDEEV----------- 183
W+ +++ F ++D ++
Sbjct: 128 YFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNS 187
Query: 184 --NRGRLREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGV--------VVPLSVDHK 233
N LR G+T N GDSRA+L GV V LS DH
Sbjct: 188 FLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAML---GVQEEDGSWSAVTLSNDHN 244
Query: 234 PDRHDELIRVEAAGGR-----VINWNGPRILGVLATSRSIGD------------------ 270
EL R++ + V+ + R+LG+L R+ GD
Sbjct: 245 AQNERELQRLKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGP 302
Query: 271 ------QYLK---------PFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVV 315
+Y K P++ ++P+V +D+FL+LA+DGLW+ + + ++V
Sbjct: 303 DQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
Query: 316 RRCFSG 321
+G
Sbjct: 363 GEYLTG 368
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 103/306 (33%), Gaps = 117/306 (38%)
Query: 128 FFGVYDGHGGARVAEACKERM----------HEVLVEVIAGEEYGEKNIE---------- 167
GV+DGH G ++A ER+ HE L+E+ E G +
Sbjct: 68 LLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPND 127
Query: 168 -----------------WERVME----------------GCFGKMDEEV----------- 183
W+ +++ F ++D ++
Sbjct: 128 YFSKEASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNS 187
Query: 184 --NRGRLREEMVGSTXXXXXXXXXXXXXXNCGDSRAVLSRGGV--------VVPLSVDHK 233
N LR G+T N GDSRA+L GV V LS DH
Sbjct: 188 FLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAML---GVQEEDGSWSAVTLSNDHN 244
Query: 234 PDRHDELIRVEAAGGR-----VINWNGPRILGVLATSRSIGD------------------ 270
E+ R++ + V+ + R+LG+L R+ GD
Sbjct: 245 AQNEREVERLKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGP 302
Query: 271 ---------------QYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVV 315
Y P++ ++P+V +D+FL+LA+DGLW+ + + ++V
Sbjct: 303 DQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
Query: 316 RRCFSG 321
+G
Sbjct: 363 GEYLTG 368
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 211 NCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRIL-GVLATSRSIG 269
+ G+SR VL G + LS H H E RV+AAGG NG +L GV+ +R+ G
Sbjct: 172 SLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPXTRAFG 231
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 45/223 (20%)
Query: 128 FFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIE--------------WERVME 173
+GV++G+ G RV +R+ L+ E+ E ++ E + +
Sbjct: 66 LYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDD 125
Query: 174 GCFGKMDEEVNRGRLREEMV--GSTXXXXXXXXXXXXXXNCGDSRAVLSRGGV----VVP 227
K ++ R + E + G+ N G +RA+L + V V
Sbjct: 126 ALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQ 185
Query: 228 LSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLA---TSRSIGDQYL----------- 273
L+VDH + DEL R+ G ++ + +G++ ++R IGD +
Sbjct: 186 LNVDHTTENEDELFRLSQLG---LDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLS 242
Query: 274 ----KPFVISKPDVMVTERSDR-DEFLILASDGLWDVVSNEAA 311
KP +I++P++ + D FL+L S+GL+ + EAA
Sbjct: 243 AAKSKP-IIAEPEIHGAQPLDGVTGFLVLMSEGLYKAL--EAA 282
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 29/124 (23%)
Query: 211 NCGDSRAVLSRGGV----VVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLA--- 263
N G +RA+L + V V L+VDH + DEL R+ G ++ + +G++
Sbjct: 184 NVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG---LDAGKIKQVGIICGQE 240
Query: 264 TSRSIGDQYL---------------KPFVISKPDVMVTERSDR-DEFLILASDGLWDVVS 307
++R IGD + KP +I++P++ + D FL+L S+GL+ +
Sbjct: 241 STRRIGDYKVKYGYTDIDLLSAAKSKP-IIAEPEIHGAQPLDGVTGFLVLMSEGLYKAL- 298
Query: 308 NEAA 311
EAA
Sbjct: 299 -EAA 301
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 29/124 (23%)
Query: 211 NCGDSRAVLSRGGV----VVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLA--- 263
N G +RA+L + V V L+VDH + DEL R+ G ++ + +G++
Sbjct: 182 NVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG---LDAGKIKQVGIICGQE 238
Query: 264 TSRSIGDQYL---------------KPFVISKPDVMVTERSDR-DEFLILASDGLWDVVS 307
++R IGD + KP +I++P++ + D FL+L S+GL+ +
Sbjct: 239 STRRIGDYKVKYGYTDIDLLSAAKSKP-IIAEPEIHGAQPLDGVTGFLVLMSEGLYKAL- 296
Query: 308 NEAA 311
EAA
Sbjct: 297 -EAA 299
>pdb|3PB2|A Chain A, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
pdb|3PB2|B Chain B, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
pdb|3PB2|C Chain C, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
pdb|3PB2|D Chain D, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
pdb|3PB2|E Chain E, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
pdb|3PB2|F Chain F, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
Length = 300
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 279 SKPDVMVTERSDRDEFLILAS--DGLWDVVSNEAACQVVRRC---FSGRIKWASSVNA 331
++ D MV +D F +L + DG+ VVSN A Q+V C FSG ++ ++ V+A
Sbjct: 186 ARSDFMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSAEVHA 243
>pdb|3QWU|A Chain A, Putative Atp-Dependent Dna Ligase From Aquifex Aeolicus.
pdb|3QWU|B Chain B, Putative Atp-Dependent Dna Ligase From Aquifex Aeolicus
Length = 370
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 213 GDSRAVLSRGGVVVPLSVDHKPDRHD 238
GD+ LSRGG + P + D PD D
Sbjct: 92 GDNYYALSRGGFICPFTTDRLPDLID 117
>pdb|3PB0|A Chain A, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
pdb|3PB0|B Chain B, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
pdb|3PB0|C Chain C, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
pdb|3PB0|D Chain D, Characterisation Of The First Monomeric
Dihydrodipicolinate Synthase Variant Reveals
Evolutionary Insights
Length = 300
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 279 SKPDVMVTERSDRDEFLILAS--DGLWDVVSNEAACQVVRRC---FSGRIKWASSVN 330
++ D MV +D F +L + DG+ VVSN A Q+V C FSG ++ + V+
Sbjct: 186 ARSDFMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSREVH 242
>pdb|1O5K|A Chain A, Crystal Structure Of Dihydrodipicolinate Synthase (Tm1521)
From Thermotoga Maritima At 1.80 A Resolution
pdb|1O5K|B Chain B, Crystal Structure Of Dihydrodipicolinate Synthase (Tm1521)
From Thermotoga Maritima At 1.80 A Resolution
Length = 306
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 279 SKPDVMVTERSDRDEFLILAS--DGLWDVVSNEAACQVVRRC---FSGRIKWASSVN 330
++ D MV +D F +L + DG+ VVSN A Q+V C FSG ++ + V+
Sbjct: 192 ARSDFMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSREVH 248
>pdb|3MOG|A Chain A, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|B Chain B, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|C Chain C, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
Length = 483
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
Query: 133 DGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREE 191
G GA +AE H+VL+ I+ E R ++G +++ V RG+L E
Sbjct: 13 SGTMGAGIAEVAASHGHQVLLYDISAEAL-------TRAIDGIHARLNSRVTRGKLTAE 64
>pdb|4E2C|A Chain A, Crystal Structure Of The Periplasmic Domain Of The
Chimeric Lps O- Antigen Chain Length Regulator Protein
pdb|4E2C|B Chain B, Crystal Structure Of The Periplasmic Domain Of The
Chimeric Lps O- Antigen Chain Length Regulator Protein
Length = 245
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 271 QYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVV 315
QY ++KP V TE +D +L S+ L ++ +EA +V
Sbjct: 159 QYANQAQVTKPQVQQTEDVTQDTLFLLGSEALESMIKHEATRPLV 203
>pdb|1TGO|A Chain A, Thermostable B Type Dna Polymerase From Thermococcus
Gorgonarius
Length = 773
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 247 GGRVINWNGPRI--LGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLIL 297
G RVI W + + V++T + + ++LK PDV++T D +F L
Sbjct: 167 GARVITWKNIDLPYVDVVSTEKEMIKRFLKVVKEKDPDVLITYNGDNFDFAYL 219
>pdb|4E2H|A Chain A, Crystal Structure Of The Periplasmic Domain Of Shigella
Flexneri Wzzb
pdb|4E2H|C Chain C, Crystal Structure Of The Periplasmic Domain Of Shigella
Flexneri Wzzb
pdb|4E2H|B Chain B, Crystal Structure Of The Periplasmic Domain Of Shigella
Flexneri Wzzb
Length = 240
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 271 QYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVV 315
QY ++KP V TE +D +L S+ L + +EA +V
Sbjct: 160 QYANQAQVTKPQVQQTEDVTQDTLFLLGSEALESXIKHEATRPLV 204
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,851,897
Number of Sequences: 62578
Number of extensions: 293054
Number of successful extensions: 655
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 571
Number of HSP's gapped (non-prelim): 54
length of query: 372
length of database: 14,973,337
effective HSP length: 100
effective length of query: 272
effective length of database: 8,715,537
effective search space: 2370626064
effective search space used: 2370626064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)