Query 017373
Match_columns 372
No_of_seqs 311 out of 1789
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 08:00:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017373.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017373hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 1.7E-51 3.7E-56 396.3 32.6 263 80-369 63-334 (365)
2 KOG0697 Protein phosphatase 1B 100.0 1.9E-50 4.2E-55 358.6 24.0 279 65-371 5-297 (379)
3 KOG0698 Serine/threonine prote 100.0 5.5E-47 1.2E-51 363.1 30.3 263 84-370 42-309 (330)
4 PTZ00224 protein phosphatase 2 100.0 3E-46 6.5E-51 361.1 29.9 247 77-368 17-274 (381)
5 PF00481 PP2C: Protein phospha 100.0 1.7E-46 3.6E-51 348.5 19.6 246 83-357 1-254 (254)
6 COG0631 PTC1 Serine/threonine 100.0 6.5E-45 1.4E-49 338.0 23.0 245 81-368 7-255 (262)
7 KOG0699 Serine/threonine prote 100.0 1.4E-41 3.1E-46 311.6 20.7 165 189-367 326-505 (542)
8 cd00143 PP2Cc Serine/threonine 100.0 1.1E-39 2.4E-44 301.2 30.1 249 83-364 2-254 (254)
9 PRK14559 putative protein seri 100.0 3.6E-40 7.9E-45 335.3 28.0 256 81-371 374-641 (645)
10 smart00332 PP2Cc Serine/threon 100.0 1.5E-38 3.3E-43 294.2 30.3 247 81-362 5-255 (255)
11 KOG0700 Protein phosphatase 2C 100.0 2.4E-39 5.1E-44 304.3 19.3 221 120-352 93-378 (390)
12 KOG1323 Serine/threonine phosp 100.0 1.6E-29 3.4E-34 230.4 22.2 240 122-370 140-492 (493)
13 KOG1379 Serine/threonine prote 99.9 1.4E-24 2.9E-29 198.3 21.2 211 94-364 89-330 (330)
14 KOG0618 Serine/threonine phosp 99.9 3.3E-23 7.2E-28 211.2 15.7 248 79-368 519-775 (1081)
15 PF13672 PP2C_2: Protein phosp 99.9 2.9E-21 6.3E-26 174.1 15.8 184 87-318 3-194 (212)
16 smart00331 PP2C_SIG Sigma fact 99.8 3.7E-17 8E-22 145.2 22.0 175 94-349 15-192 (193)
17 TIGR02865 spore_II_E stage II 99.7 1.8E-15 4E-20 159.4 23.8 202 81-364 551-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.5 1.4E-12 3.1E-17 115.4 21.0 178 124-365 2-193 (193)
19 COG2208 RsbU Serine phosphatas 98.5 2.2E-05 4.8E-10 76.8 21.0 177 124-365 173-366 (367)
20 PF06972 DUF1296: Protein of u 39.9 44 0.00096 23.5 3.2 27 306-347 19-45 (60)
21 COG1539 FolB Dihydroneopterin 38.0 1.6E+02 0.0034 23.9 6.8 62 297-370 43-104 (121)
22 smart00331 PP2C_SIG Sigma fact 32.0 3.2E+02 0.007 23.2 8.6 68 290-365 27-95 (193)
23 PRK06369 nac nascent polypepti 31.1 2.3E+02 0.0049 22.9 6.5 45 274-318 36-87 (115)
24 PF09436 DUF2016: Domain of un 30.8 28 0.00061 25.5 1.2 21 290-311 26-46 (72)
25 cd00534 DHNA_DHNTPE Dihydroneo 30.3 1.8E+02 0.004 23.0 6.1 60 297-368 42-101 (118)
26 COG2168 DsrH Uncharacterized c 28.2 41 0.0009 26.1 1.8 30 287-317 21-50 (96)
27 TIGR00722 ttdA_fumA_fumB hydro 22.8 1.7E+02 0.0037 27.4 5.2 76 129-211 179-254 (273)
28 PRK06246 fumarate hydratase; P 20.6 1.5E+02 0.0033 27.8 4.4 74 130-210 187-260 (280)
29 TIGR00264 alpha-NAC-related pr 20.4 4.6E+02 0.01 21.2 6.4 45 274-318 40-89 (116)
30 PF01436 NHL: NHL repeat; Int 20.3 1.9E+02 0.0041 16.5 3.6 21 200-220 8-28 (28)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=1.7e-51 Score=396.32 Aligned_cols=263 Identities=33% Similarity=0.494 Sum_probs=221.4
Q ss_pred cceeeeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 017373 80 TCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGE 159 (372)
Q Consensus 80 ~~~~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~ 159 (372)
..+.++..|++|.|+.|||++++..++.... +....+.....||||||||||+.+|++|++.+++.|.+...
T Consensus 63 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~------~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~-- 134 (365)
T PLN03145 63 PVVRSGAWADIGSRSSMEDVYICVDNFMSDF------GLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDED-- 134 (365)
T ss_pred CceEEEEEccccCCCCCCCceEecccccccc------cccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhc--
Confidence 3478899999999999999998765432110 01111123568999999999999999999999998876432
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcc--cCCcccccceEEEEEEecCeEEEeeeccceEEEEeCCeeeecCCCCCCCCh
Q 017373 160 EYGEKNIEWERVMEGCFGKMDEEVNRG--RLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRH 237 (372)
Q Consensus 160 ~~~~~~~~~~~~l~~a~~~~~~~i~~~--~~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~~~ 237 (372)
....+.++|.++|..++..+... ......+|||++++++.++.+|++||||||+|++++|++++||+||++.++
T Consensus 135 ----~~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~ 210 (365)
T PLN03145 135 ----FPREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCS 210 (365)
T ss_pred ----cchhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCH
Confidence 13466788999999999998654 123445999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeeeecCCCccccccccccccccccCCC-------ceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHH
Q 017373 238 DELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKP-------FVISKPDVMVTERSDRDEFLILASDGLWDVVSNEA 310 (372)
Q Consensus 238 ~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~-------~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~e 310 (372)
.|..||.+.||.+.. .++.|.+++||+|||..+|. .++++|++..+++.++|+|||||||||||+|++++
T Consensus 211 ~E~~RI~~~Gg~v~~---g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee 287 (365)
T PLN03145 211 KERKRIEASGGYVYD---GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQN 287 (365)
T ss_pred HHHHHHHHcCCceec---ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHH
Confidence 999999999998863 57889999999999987753 36789999999999999999999999999999999
Q ss_pred HHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCC
Q 017373 311 ACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTK 369 (372)
Q Consensus 311 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~ 369 (372)
+.+++...+.. ..+++++|+.|++.|+.+|+.||||||||+|+..++
T Consensus 288 ~v~~i~~~l~~------------~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~~~ 334 (365)
T PLN03145 288 AVDFARRRLQE------------HNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQPP 334 (365)
T ss_pred HHHHHHHHHhc------------CCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecCCC
Confidence 99888765432 256889999999999999999999999999987544
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-50 Score=358.55 Aligned_cols=279 Identities=34% Similarity=0.508 Sum_probs=243.6
Q ss_pred CccchhhhhcccCCccceeeeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHH
Q 017373 65 ENYDVLEKKARTNTVTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEAC 144 (372)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~a 144 (372)
.+.+-++|....+..+++.||..|++|||-.|||++........+. .+|.||||||||.|+..+.+|
T Consensus 5 LdKPkteKhn~~G~GNglryg~SSMQGWR~eMEDah~A~~~l~~~l-------------~dWSfFAVfDGHAGs~va~~c 71 (379)
T KOG0697|consen 5 LDKPKTEKHNAEGEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPSPL-------------EDWSFFAVFDGHAGSQVANHC 71 (379)
T ss_pred ccCcccccccccCcCCceeeeeccccchhhhhhhhhhhhhcCCCCc-------------cCceEEEEEcCccchHHHHHH
Confidence 3445566777778999999999999999999999998776654432 699999999999999999999
Q ss_pred HHHHHHHHHHHHhc--cccCCchHHHHHHHHHHHHHHHHHHhcc---cCCcccccceEEEEEEecCeEEEeeeccceEEE
Q 017373 145 KERMHEVLVEVIAG--EEYGEKNIEWERVMEGCFGKMDEEVNRG---RLREEMVGSTAVVAVVGKEELVVANCGDSRAVL 219 (372)
Q Consensus 145 s~~l~~~l~~~~~~--~~~~~~~~~~~~~l~~a~~~~~~~i~~~---~~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l 219 (372)
+++|.+.|...-.. ......-.+.+.-++..|.++++..... .....++|||++++++....+|++|+||||++|
T Consensus 72 ~~hLlehi~sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl 151 (379)
T KOG0697|consen 72 AEHLLEHIISSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVL 151 (379)
T ss_pred HHHHHHHhhhhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhhe
Confidence 99999988754332 1122345578888999999999877655 334455999999999999999999999999999
Q ss_pred EeCCeeeecCCCCCCCChHHHHHHHHcCCeeeecCCCccccccccccccccccCC---------CceeecCeEEEEEecC
Q 017373 220 SRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERSD 290 (372)
Q Consensus 220 ~r~g~~~~LT~DH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k---------~~v~~~P~i~~~~l~~ 290 (372)
+|+|+++.-|.||+|.+|.|++||..+||.|.- .|++|.|+++|+|||+.+| +.|+++|++.......
T Consensus 152 ~rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMI---qRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~e 228 (379)
T KOG0697|consen 152 CRNGEVVFSTQDHKPYLPKEKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSE 228 (379)
T ss_pred ecCCceEEeccCCCCCChHHHHHHhcCCCeEEE---EEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccc
Confidence 999999999999999999999999999999874 7999999999999999988 3599999999999999
Q ss_pred CCeEEEEEcCCCCCCCCHHHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCCC
Q 017373 291 RDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTKF 370 (372)
Q Consensus 291 ~D~~LIL~SDGv~d~ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~ 370 (372)
.|+||||+|||+||+++++|++++++..+. ...+...+|..+++.++-+|+.||+|+|+|.|-..+++
T Consensus 229 edeFivlACDGIwDVMtneelcefv~sRl~------------Vt~dL~~vcn~VvDtCLhKGSRDNMsivlvcfp~APkv 296 (379)
T KOG0697|consen 229 EDEFIVLACDGIWDVMTNEELCEFVKSRLE------------VTSDLEEVCNDVVDTCLHKGSRDNMSIVLVCFPGAPKV 296 (379)
T ss_pred cCcEEEEEccchhhhcccHHHHHHHHhhhe------------ecccHHHHHHHHHHHHHhccCccCceEEEEecCCCCCC
Confidence 999999999999999999999999998664 34788999999999999999999999999999887765
Q ss_pred C
Q 017373 371 N 371 (372)
Q Consensus 371 ~ 371 (372)
+
T Consensus 297 ~ 297 (379)
T KOG0697|consen 297 S 297 (379)
T ss_pred C
Confidence 3
No 3
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-47 Score=363.07 Aligned_cols=263 Identities=46% Similarity=0.648 Sum_probs=226.9
Q ss_pred eeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhccccCC
Q 017373 84 HGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGE 163 (372)
Q Consensus 84 ~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~~~~ 163 (372)
.+.++.+|+|..|||++.....+..... .......||||||||||..+|+++.+.|+..+.+.......
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~---------~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~-- 110 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDV---------GGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKD-- 110 (330)
T ss_pred eEEEecCCCCCccCcceeeccccccccc---------CCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccc--
Confidence 3455888889999999988876532110 01126899999999999999999999999999988764211
Q ss_pred chHHHHHHHHHHHH-HHHHHHhcccCCcccccceEEEEEEecC-eEEEeeeccceEEEEeCC-eeeecCCCCCCCChHHH
Q 017373 164 KNIEWERVMEGCFG-KMDEEVNRGRLREEMVGSTAVVAVVGKE-ELVVANCGDSRAVLSRGG-VVVPLSVDHKPDRHDEL 240 (372)
Q Consensus 164 ~~~~~~~~l~~a~~-~~~~~i~~~~~~~~~~GtT~~v~~i~~~-~l~~anvGDSR~~l~r~g-~~~~LT~DH~~~~~~E~ 240 (372)
...++.++.++|. .++..+.........+|||++++++.++ .+|+||+||||++|++.| .+++||.||+|.+++|+
T Consensus 111 -~~~~~~a~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~ 189 (330)
T KOG0698|consen 111 -RQDVKDALRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDER 189 (330)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHH
Confidence 1468999999999 6999998642335778999888888755 999999999999999865 89999999999999999
Q ss_pred HHHHHcCCeeeecCC-CccccccccccccccccCC-CceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHHHHHHHHhh
Q 017373 241 IRVEAAGGRVINWNG-PRILGVLATSRSIGDQYLK-PFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRC 318 (372)
Q Consensus 241 ~ri~~~gg~v~~~~~-~r~~g~l~vtRaiGd~~~k-~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~ei~~i~~~~ 318 (372)
.||+.+||.|..+.+ .|++|.|+++|+|||..+| +.|+++|++....+.+.|+||||+||||||+++++|++++++.+
T Consensus 190 ~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~ 269 (330)
T KOG0698|consen 190 ERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDE 269 (330)
T ss_pred HHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHH
Confidence 999999999998775 8999999999999999999 89999999999999999999999999999999999999999986
Q ss_pred hcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCCC
Q 017373 319 FSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTKF 370 (372)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~ 370 (372)
+. ....+..++..|...|+.+++.||||||||.|..+.+.
T Consensus 270 ~~------------~~~~~~~a~~~l~~~a~~~~s~DnitvvvV~l~~~~~~ 309 (330)
T KOG0698|consen 270 LA------------SISSPLAAAKLLATEALSRGSKDNITVVVVRLKSSPKS 309 (330)
T ss_pred hh------------ccccHHHHHHHHHHHHhhcCCCCCeEEEEEEecCcccc
Confidence 41 13578899999999999999999999999999988653
No 4
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=3e-46 Score=361.08 Aligned_cols=247 Identities=34% Similarity=0.467 Sum_probs=207.5
Q ss_pred CCccceeeeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHH
Q 017373 77 NTVTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVI 156 (372)
Q Consensus 77 ~~~~~~~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~ 156 (372)
.....+.+|+.+++|.|++|||++++... ....||||||||||..+++++++.+.+.+.+..
T Consensus 17 ~~~~~~~~g~~s~~G~R~~nED~~~v~~~------------------~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~ 78 (381)
T PTZ00224 17 AGNSIFRCASACVNGYRESMEDAHLLYLT------------------DDWGFFGVFDGHVNDECSQYLARAWPQALEKEP 78 (381)
T ss_pred CCCccEEEEEEeCCCCCCCCCCeeEeccC------------------CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcc
Confidence 45567899999999999999999887532 345699999999999998888888876654321
Q ss_pred hccccCCchHHHHHHHHHHHHHHHHHHhcccCCcccccceEEEEEEe-cCeEEEeeeccceEEEEeCCeeeecCCCCCCC
Q 017373 157 AGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVG-KEELVVANCGDSRAVLSRGGVVVPLSVDHKPD 235 (372)
Q Consensus 157 ~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~GtT~~v~~i~-~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~ 235 (372)
. ....+.|.++|..+|+.+... ...+|||+++++|. +..+|++||||||+|++|+|++++||+||++.
T Consensus 79 ~--------~~~~~~l~~a~~~~d~~i~~~---~~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~ 147 (381)
T PTZ00224 79 E--------PMTDERMEELCLEIDEEWMDS---GREGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPN 147 (381)
T ss_pred c--------cccHHHHHHHHHHHHHHHHhc---ccCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCC
Confidence 1 111345888999999999865 23469999988886 57999999999999999999999999999999
Q ss_pred ChHHHHHHHHcCCeeeecCCCccccccccccccccccCC---------CceeecCeEEEEEecCCCeEEEEEcCCCCC-C
Q 017373 236 RHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLK---------PFVISKPDVMVTERSDRDEFLILASDGLWD-V 305 (372)
Q Consensus 236 ~~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k---------~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d-~ 305 (372)
++.|..||...||.+.. .|+.|.+.+||+|||..+| +.|+++|++..+.+.++| ||||||||||| +
T Consensus 148 ~~~E~~RI~~~gg~v~~---~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D-~llLaSDGL~d~~ 223 (381)
T PTZ00224 148 NPGERQRIEACGGRVVS---NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSND-FIILACDGVFEGN 223 (381)
T ss_pred CHHHHhHHHHccCEecc---ccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCC-EEEEECCCcCcCc
Confidence 99999999999998863 5888999999999997543 346789999999999887 89999999999 8
Q ss_pred CCHHHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCC
Q 017373 306 VSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPT 368 (372)
Q Consensus 306 ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~ 368 (372)
++++|+.+++...+.. ..+++++|+.|++.|+.+|+.||||||||+|...+
T Consensus 224 ls~eEi~~iv~~~l~~------------~~~~~~aA~~Lv~~A~~rGs~DNITvIvV~~~~~~ 274 (381)
T PTZ00224 224 FSNEEVVAFVKEQLET------------CDDLAVVAGRVCDEAIRRGSKDNISCLIVQLKDGA 274 (381)
T ss_pred cCHHHHHHHHHHHHhc------------CCCHHHHHHHHHHHHHhcCCCCCEEEEEEEeeCCC
Confidence 9999999999764321 25788999999999999999999999999997654
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=1.7e-46 Score=348.51 Aligned_cols=246 Identities=42% Similarity=0.622 Sum_probs=206.0
Q ss_pred eeeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhccccC
Q 017373 83 SHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYG 162 (372)
Q Consensus 83 ~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~~~ 162 (372)
.+|+.+..|+|+.|||++++..++... .......+|+|||||||..++++++..+.+.+.+.....
T Consensus 1 ~~~~~~~~g~r~~~eD~~~~~~~~~~~-----------~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~--- 66 (254)
T PF00481_consen 1 DYGVSSMQGVRKEMEDRHLIIQNFNSN-----------SGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFN--- 66 (254)
T ss_dssp EEEEEEEECTSSSHHEEEEEEEEETCC-----------TTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CcCeecCCCCCCcccCEEEEecCcccc-----------CCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccc---
Confidence 367889999999999999998865321 112588999999999999999999999998888776531
Q ss_pred CchHHHHHHHHHHHHH-HHHHHhcccC--CcccccceEEEEEEecCeEEEeeeccceEEEEeCCeee-ecCCCCCCCChH
Q 017373 163 EKNIEWERVMEGCFGK-MDEEVNRGRL--REEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVV-PLSVDHKPDRHD 238 (372)
Q Consensus 163 ~~~~~~~~~l~~a~~~-~~~~i~~~~~--~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r~g~~~-~LT~DH~~~~~~ 238 (372)
....+.++|..+|.. +++.+..... ....+|||++++++.++++|+|||||||+||++.+... +||.||+|.++.
T Consensus 67 -~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~ 145 (254)
T PF00481_consen 67 -DGNDIEEALRQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPD 145 (254)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHH
T ss_pred -cccchhhcccceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhh
Confidence 122688999999999 8888876311 56889999999999999999999999999999999888 999999999999
Q ss_pred HHHHHHHcCCeeeecCCCccccccccccccccccCCC----ceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHHHHHH
Q 017373 239 ELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKP----FVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQV 314 (372)
Q Consensus 239 E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~----~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~ei~~i 314 (372)
|+.||+..||.+.. ..|+.|.|++||+|||..+|+ .|+++|++..+++.++|.|||||||||||+|+++|+.++
T Consensus 146 E~~RI~~~gg~v~~--~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~ 223 (254)
T PF00481_consen 146 ERERIRKAGGRVSE--NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDI 223 (254)
T ss_dssp HHHHHHHTT-GEEE--TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHH
T ss_pred ccceeecccccccc--chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHH
Confidence 99999999999986 689999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCe
Q 017373 315 VRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNI 357 (372)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNi 357 (372)
+.+.... +..++.+|+.|++.|+.+|+.|||
T Consensus 224 v~~~~~~------------~~~~~~~a~~L~~~A~~~gs~DNi 254 (254)
T PF00481_consen 224 VRESLNS------------GRSPQEAAEKLVDEAIARGSKDNI 254 (254)
T ss_dssp HHHHHHH------------HSHHHHHHHHHHHHHHHTTHHSHE
T ss_pred HHHHHhc------------CCcHHHHHHHHHHHHHhcCCCCCC
Confidence 9986321 125899999999999999999997
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-45 Score=337.97 Aligned_cols=245 Identities=31% Similarity=0.430 Sum_probs=206.7
Q ss_pred ceeeeeeecccC-CCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 017373 81 CLSHGTMSVIGR-RKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGE 159 (372)
Q Consensus 81 ~~~~~~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~ 159 (372)
.+.++..++.|. |..|||++++..+... .. ..||+|||||||+.+|++||+.+++.|.+.+...
T Consensus 7 ~~~~~~~s~~g~~R~~NeD~~~~~~~~~~--------------~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~ 71 (262)
T COG0631 7 SLKVAGLSDVGTVRKHNEDAFLIKPNENG--------------NL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDET 71 (262)
T ss_pred eeeeeeeccCCCccCCCCcceeeccccCC--------------cc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhc
Confidence 567788899998 8889999999764211 13 6799999999999999999999999999998764
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcc---cCCcccccceEEEEEEecCeEEEeeeccceEEEEeCCeeeecCCCCCCCC
Q 017373 160 EYGEKNIEWERVMEGCFGKMDEEVNRG---RLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDR 236 (372)
Q Consensus 160 ~~~~~~~~~~~~l~~a~~~~~~~i~~~---~~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~~ 236 (372)
........+.+.|.+++..+++.+... ......||||++++++.++++|+|||||||+||+|+|.+++||.||++.+
T Consensus 72 ~~~~~~~~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~ 151 (262)
T COG0631 72 NFNSLNESLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVN 151 (262)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHH
Confidence 332222227889999999999999876 24668899999999999999999999999999999999999999999977
Q ss_pred hHHHHHHHHcCCeeeecCCCccccccccccccccccCCCceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHHHHHHHH
Q 017373 237 HDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVR 316 (372)
Q Consensus 237 ~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~ei~~i~~ 316 (372)
..+..++...++.... +...++||+||+... ..|++..+.+.++| |||||||||||.++++++.+++.
T Consensus 152 ~~~~~~~~~~~~~~~~------~~~~~ltralG~~~~-----~~p~~~~~~~~~~d-~llL~SDGl~d~v~~~~i~~il~ 219 (262)
T COG0631 152 RLEQRGIITPEEARSH------PRRNALTRALGDFDL-----LEPDITELELEPGD-FLLLCSDGLWDVVSDDEIVDILK 219 (262)
T ss_pred HHHHhcCCCHHHHHhC------ccchhhhhhcCCCcc-----cceeEEEEEcCCCC-EEEEECCCCccCcCHHHHHHHHh
Confidence 7666665554433321 223379999999864 68999999999995 88999999999999999999998
Q ss_pred hhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCC
Q 017373 317 RCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPT 368 (372)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~ 368 (372)
. ..+++++++.|++.|+.+|+.||+|+|+|.+....
T Consensus 220 ~----------------~~~~~~~~~~li~~a~~~g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 220 N----------------SETPQEAADKLIELALEGGGPDNITVVLVRLNGEG 255 (262)
T ss_pred c----------------CCCHHHHHHHHHHHHHhcCCCCceEEEEEEeeccc
Confidence 5 37899999999999999999999999999988664
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=311.63 Aligned_cols=165 Identities=36% Similarity=0.616 Sum_probs=150.9
Q ss_pred CcccccceEEEEEEecCeEEEeeeccceEEEEeCCeeeecCCCCCCCChHHHHHHHHcCCeeeecCCCcccccccccccc
Q 017373 189 REEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSI 268 (372)
Q Consensus 189 ~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRai 268 (372)
....+|||++||++.+++|||||.|||||++.|.|+.+-++.||+|.+..|..||.++||.|.- .+|++|+|+++|+|
T Consensus 326 PG~DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl--DGRVNGGLNLSRA~ 403 (542)
T KOG0699|consen 326 PGEDSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL--DGRVNGGLNLSRAF 403 (542)
T ss_pred CCCCCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee--cceecCccchhhhh
Confidence 4566899999999999999999999999999999999999999999999999999999999974 48999999999999
Q ss_pred ccccCC---------CceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHHHHHHHHhhhcccccccccCCCCCCchHHH
Q 017373 269 GDQYLK---------PFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAAR 339 (372)
Q Consensus 269 Gd~~~k---------~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (372)
||..+| ++|++-|+|....|++.|+|+||+|||||++|+.++++++++..|.+ ......
T Consensus 404 GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~------------n~~ls~ 471 (542)
T KOG0699|consen 404 GDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAK------------NSSLSE 471 (542)
T ss_pred hhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhc------------CchHHH
Confidence 998877 35889999999999999999999999999999999999999987653 367889
Q ss_pred HHHHHHHHHHhCC------CCCCeEEEEEEcCCC
Q 017373 340 AAAVLVELAISRG------SSDNISVIVVELNKP 367 (372)
Q Consensus 340 ~a~~L~~~A~~~g------~~DNiTvIvv~l~~~ 367 (372)
+|+.|++.++.-. +.||||||++.|.+.
T Consensus 472 iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 472 ICEELCDACLAPSTDGDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred HHHHHHHhhcCCCCCCCCcCCCcceEEEEEeccc
Confidence 9999999998742 579999999999753
No 8
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.1e-39 Score=301.17 Aligned_cols=249 Identities=44% Similarity=0.626 Sum_probs=212.3
Q ss_pred eeeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhccccC
Q 017373 83 SHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYG 162 (372)
Q Consensus 83 ~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~~~ 162 (372)
.++..+..|.|+.|||++++...... .+..+|+|||||||+..|++|++.+++.+.+.+.....
T Consensus 2 ~~~~~~~~g~r~~neD~~~~~~~~~~---------------~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~- 65 (254)
T cd00143 2 SAGVSDKGGDRKTNEDAVVIKPNLNN---------------EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLT- 65 (254)
T ss_pred ceeeecCCCCCCCCcceEEEeccCCC---------------CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccc-
Confidence 45677778889999999998754210 26789999999999999999999999999988864221
Q ss_pred CchHHHHHHHHHHHHHHHHHHhccc---CCcccccceEEEEEEecCeEEEeeeccceEEEEeCCeeeecCCCCCCCChHH
Q 017373 163 EKNIEWERVMEGCFGKMDEEVNRGR---LREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDE 239 (372)
Q Consensus 163 ~~~~~~~~~l~~a~~~~~~~i~~~~---~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~~~~E 239 (372)
.....+...|..+|..+++.+.... .....+|||++++++.++.++++|+||||+|++++++++++|.||++.++.+
T Consensus 66 ~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~ 145 (254)
T cd00143 66 LSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEE 145 (254)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHH
Confidence 2256777889999999999997662 2457789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeeeecCCCccccccccccccccccCCCceeecCeEEEEEe-cCCCeEEEEEcCCCCCCCCHHHHHHHHHhh
Q 017373 240 LIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTER-SDRDEFLILASDGLWDVVSNEAACQVVRRC 318 (372)
Q Consensus 240 ~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l-~~~D~~LIL~SDGv~d~ls~~ei~~i~~~~ 318 (372)
..++...++.+. ..+.++...+||+||+..+|+.+..+|++..+++ .++| +||||||||||++++++|.+++...
T Consensus 146 ~~~i~~~~~~~~---~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d-~ill~SDG~~~~l~~~~i~~~~~~~ 221 (254)
T cd00143 146 RERIEKAGGRVS---NGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDD-FLILASDGLWDVLSNQEAVDIVRSE 221 (254)
T ss_pred HHHHHHcCCcEE---eCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCc-EEEEECCCCeeccChHHHHHHHHHH
Confidence 999999988653 2445566779999999998888889999999999 6666 7889999999999999999999874
Q ss_pred hcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEc
Q 017373 319 FSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVEL 364 (372)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l 364 (372)
.. ..+++++|+.|++.|..+++.||+|+||+.+
T Consensus 222 ~~-------------~~~~~~~a~~l~~~a~~~~~~Dn~t~i~~~~ 254 (254)
T cd00143 222 LA-------------KEDLQEAAQELVDLALRRGSHDNITVVVVRL 254 (254)
T ss_pred hc-------------ccCHHHHHHHHHHHHHhCCCCCCEEEEEEeC
Confidence 10 0268999999999999999999999999975
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=3.6e-40 Score=335.34 Aligned_cols=256 Identities=22% Similarity=0.252 Sum_probs=191.2
Q ss_pred ceeeeeeecccC-CCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 017373 81 CLSHGTMSVIGR-RKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGE 159 (372)
Q Consensus 81 ~~~~~~~s~~G~-R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~ 159 (372)
.+.+++.|++|. |+.|||++.+........ ...........+|+|||||||+.+|++||+.+++.|.+.+...
T Consensus 374 ~l~~a~~Td~G~~R~~NEDa~~i~~~~~~~~------~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~ 447 (645)
T PRK14559 374 SLEDAGRTDVGRQRHHNEDYFGINTRIQKLE------NPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQH 447 (645)
T ss_pred eEEEEEECCCCCCCcccCCcccccccccccc------cccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhh
Confidence 578899999997 999999987754321100 0000000245689999999999999999999999998877632
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcc-----cCCcccccceEEEEEEecCeEEEeeeccceEEEE-eCCeeeecCCCCC
Q 017373 160 EYGEKNIEWERVMEGCFGKMDEEVNRG-----RLREEMVGSTAVVAVVGKEELVVANCGDSRAVLS-RGGVVVPLSVDHK 233 (372)
Q Consensus 160 ~~~~~~~~~~~~l~~a~~~~~~~i~~~-----~~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~-r~g~~~~LT~DH~ 233 (372)
... .....+.|.++|..+|+.|.+. ......||||++++++.++.+|++||||||+|++ |+|++++||+||+
T Consensus 448 ~~~--~~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs 525 (645)
T PRK14559 448 WQD--ELPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHE 525 (645)
T ss_pred hcc--cccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCC
Confidence 111 1123567899999999999764 1134579999999999999999999999999998 5789999999999
Q ss_pred CCChHHHHHHHHcCCeeeecCCCccccccccccccccccCCCceeecCeEEEEEecCCCeEEEEEcCCCCCC--CCH---
Q 017373 234 PDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDV--VSN--- 308 (372)
Q Consensus 234 ~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~--ls~--- 308 (372)
+ ..++...| +.........+...+||+||+...+. .+|++..+.+.++| +||||||||||+ +.+
T Consensus 526 ~-----~~~lv~~G--i~~~~a~~~p~~~~LTrALG~~~~~~---l~Pdi~~~~L~~gD-~lLLCSDGL~D~~~ve~~~~ 594 (645)
T PRK14559 526 V-----GQREIQRG--VEPQIAYARPDAYQLTQALGPRDNSA---IQPDIQFLEIEEDT-LLLLCSDGLSDNDLLETHWQ 594 (645)
T ss_pred H-----HHHHHHhC--CCHHHHhcCcccceeeeccCCCCCCc---ccceEEEEEcCCCC-EEEEECCCCCCCcccchHHH
Confidence 8 34444544 22111122245677999999865432 48999999998876 778999999994 443
Q ss_pred HHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCCCC
Q 017373 309 EAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTKFN 371 (372)
Q Consensus 309 ~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~~ 371 (372)
+++..++.. ..++.++|+.|++.|+.+|++||||+|||++...+..+
T Consensus 595 ~~l~~il~~----------------~~~l~~aa~~Li~~Al~~gg~DNITvIvV~l~~~p~~~ 641 (645)
T PRK14559 595 THLLPLLSS----------------SANLDQGLNKLIDLANQYNGHDNITAILVRLKVRPQLS 641 (645)
T ss_pred HHHHHHHhc----------------CCCHHHHHHHHHHHHHHcCCCCcEEEEEEEeccCCCCC
Confidence 233344432 35789999999999999999999999999999887754
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.5e-38 Score=294.24 Aligned_cols=247 Identities=48% Similarity=0.695 Sum_probs=209.9
Q ss_pred ceeeeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhccc
Q 017373 81 CLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEE 160 (372)
Q Consensus 81 ~~~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~ 160 (372)
.+.++..+..|.|..|||++++..... .+..+|+|||||||..+++++++.+++.+.+.....
T Consensus 5 ~~~~~~~~~~~~r~~neD~~~~~~~~~----------------~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~- 67 (255)
T smart00332 5 GLRYGLSSMQGVRKPMEDAHVITPDLS----------------DSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKH- 67 (255)
T ss_pred ceeEEEecCCCCCCCCcceEEEeccCC----------------CCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhc-
Confidence 456677777788999999999875421 368899999999999999999999999888765421
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHhcccC---CcccccceEEEEEEecCeEEEeeeccceEEEEeCCeeeecCCCCCCCCh
Q 017373 161 YGEKNIEWERVMEGCFGKMDEEVNRGRL---REEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRH 237 (372)
Q Consensus 161 ~~~~~~~~~~~l~~a~~~~~~~i~~~~~---~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~~~ 237 (372)
......+.+.|.+++..+++.+..... ....+|||++++++.++.+|++|+||||+|++|++++.+||.||++.++
T Consensus 68 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~ 146 (255)
T smart00332 68 -KDELEDVEEALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNE 146 (255)
T ss_pred -ccchhHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCH
Confidence 111246788899999999999977621 2457899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeeeecCCCccccccccccccccccCCCceeecCeEEEEEe-cCCCeEEEEEcCCCCCCCCHHHHHHHHH
Q 017373 238 DELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTER-SDRDEFLILASDGLWDVVSNEAACQVVR 316 (372)
Q Consensus 238 ~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l-~~~D~~LIL~SDGv~d~ls~~ei~~i~~ 316 (372)
.|..++...++.+.. .+.++.+.+||++|+..+|+.+..+|++...++ .++| +||||||||||+++++++.+++.
T Consensus 147 ~~~~~i~~~~~~~~~---~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d-~ill~SDGv~~~l~~~~i~~~~~ 222 (255)
T smart00332 147 DERARIEAAGGFVIN---GRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDD-FLILASDGLWDVLSNQEVVDIVR 222 (255)
T ss_pred HHHHHHHHcCCEEEC---CeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCc-EEEEECCccccCCCHHHHHHHHH
Confidence 999999999987764 255667889999999999999999999999996 6666 88899999999999999999998
Q ss_pred hhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEE
Q 017373 317 RCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVV 362 (372)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv 362 (372)
.... ..++.++|+.|++.|..++..||+|+|||
T Consensus 223 ~~~~-------------~~~~~~~~~~l~~~a~~~~~~Dn~T~ivv 255 (255)
T smart00332 223 KHLS-------------KSDPEEAAKRLIDLALARGSKDNITVIVV 255 (255)
T ss_pred HHhh-------------cCCHHHHHHHHHHHHHHcCCCCCeEEEEC
Confidence 7421 02589999999999999999999999985
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=304.28 Aligned_cols=221 Identities=32% Similarity=0.557 Sum_probs=186.3
Q ss_pred CCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhccccCC---------------------------c-hHHHHHH
Q 017373 120 DDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGE---------------------------K-NIEWERV 171 (372)
Q Consensus 120 ~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~~~~---------------------------~-~~~~~~~ 171 (372)
..++.++.|+||||||||..++++.++.|..++...+....+.. . ...+.++
T Consensus 93 ~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~a 172 (390)
T KOG0700|consen 93 VSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEA 172 (390)
T ss_pred eeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHH
Confidence 33457999999999999999999999999999986554321100 1 4678899
Q ss_pred HHHHHHHHHHHHhcc-------cCCcccccceEEEEEEecCeEEEeeeccceEEEEe---CC---eeeecCCCCCCCChH
Q 017373 172 MEGCFGKMDEEVNRG-------RLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSR---GG---VVVPLSVDHKPDRHD 238 (372)
Q Consensus 172 l~~a~~~~~~~i~~~-------~~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r---~g---~~~~LT~DH~~~~~~ 238 (372)
|.+||.++++.+... .+....+|+|++++++.+..+||||+|||||+|.+ ++ .++|||.||+..+++
T Consensus 173 l~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~ 252 (390)
T KOG0700|consen 173 LSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNED 252 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHH
Confidence 999999999988644 56778899999999999999999999999999965 33 579999999999999
Q ss_pred HHHHHHHcCC---eeeecCCCccccccccccccccccCC---------------------CceeecCeEEEEEecCCCeE
Q 017373 239 ELIRVEAAGG---RVINWNGPRILGVLATSRSIGDQYLK---------------------PFVISKPDVMVTERSDRDEF 294 (372)
Q Consensus 239 E~~ri~~~gg---~v~~~~~~r~~g~l~vtRaiGd~~~k---------------------~~v~~~P~i~~~~l~~~D~~ 294 (372)
|+.||+..+. .+.....+|+.|.|.+||||||.++| ||++++|+++.++|.+.|+|
T Consensus 253 Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkF 332 (390)
T KOG0700|consen 253 EVRRIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKF 332 (390)
T ss_pred HHHHHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeE
Confidence 9999999873 33333347999999999999999988 78999999999999999999
Q ss_pred EEEEcCCCCCCCCHHHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCC
Q 017373 295 LILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRG 352 (372)
Q Consensus 295 LIL~SDGv~d~ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g 352 (372)
|||+||||||+|+++|++.++..++.+. -+-+++|+.|++.|+.+.
T Consensus 333 LIlASDGLwE~lsNeeaV~lV~~~i~~~------------~pd~~~A~hLIr~aL~~a 378 (390)
T KOG0700|consen 333 LILASDGLWEYLSNEEAVSLVHEFISGK------------FPDGNPATHLIRHALGRA 378 (390)
T ss_pred EEEeccchhhhcChHHHHHHHHHhhccC------------CCCCCHHHHHHHHHHhhh
Confidence 9999999999999999999999976531 122567889999888764
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-29 Score=230.35 Aligned_cols=240 Identities=33% Similarity=0.481 Sum_probs=185.7
Q ss_pred CCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhccc----------c------------------------CCchHH
Q 017373 122 DQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEE----------Y------------------------GEKNIE 167 (372)
Q Consensus 122 ~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~----------~------------------------~~~~~~ 167 (372)
+..+..+|.+||||.|..++-+|++.+...|.+.+.+.. + -....-
T Consensus 140 ~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~L 219 (493)
T KOG1323|consen 140 PRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHL 219 (493)
T ss_pred CCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHh
Confidence 345788999999999999999999999988776554210 0 001234
Q ss_pred HHHHHHHHHHHHHHHHhcc-cCCcccccceEEEEEEecCeEEEeeeccceEEEEeCCeeeecCCCCCCCChHHHHHHHHc
Q 017373 168 WERVMEGCFGKMDEEVNRG-RLREEMVGSTAVVAVVGKEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRHDELIRVEAA 246 (372)
Q Consensus 168 ~~~~l~~a~~~~~~~i~~~-~~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~~~~E~~ri~~~ 246 (372)
+..+|+.||+.++++|... ......+|||+++++.--+++|++|.||||++|+|++++++|+.+.+| +.|++|++..
T Consensus 220 ViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTP--etERqRlQ~L 297 (493)
T KOG1323|consen 220 VIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTP--ETERQRLQEL 297 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCc--HHHHHHHHHH
Confidence 6788999999999999876 345677899999999999999999999999999999999999999999 5677777553
Q ss_pred C--------CeeeecC--------------------------------------------CCccccccccccccccccC-
Q 017373 247 G--------GRVINWN--------------------------------------------GPRILGVLATSRSIGDQYL- 273 (372)
Q Consensus 247 g--------g~v~~~~--------------------------------------------~~r~~g~l~vtRaiGd~~~- 273 (372)
+ +.....+ ..|+.+.+++||.|||..+
T Consensus 298 af~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lk 377 (493)
T KOG1323|consen 298 AFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLK 377 (493)
T ss_pred hhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceee
Confidence 2 2111100 1567788999999999754
Q ss_pred --------CCceeecCeEEEEEecC----CCeEEEEEcCCCCCCCCHHHHHHHHHhhhcccccccccCCCCCCchHHHHH
Q 017373 274 --------KPFVISKPDVMVTERSD----RDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAA 341 (372)
Q Consensus 274 --------k~~v~~~P~i~~~~l~~----~D~~LIL~SDGv~d~ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a 341 (372)
||++++.|+++++++.+ .|+.+||+|||+||+++++|+..+++.++-+... ....--..+|
T Consensus 378 v~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp-------~Dp~RYt~aa 450 (493)
T KOG1323|consen 378 VVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDP-------ADPSRYTQAA 450 (493)
T ss_pred eecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCC-------CChhHHHHHH
Confidence 58999999999998753 5669999999999999999999999998754211 0112234577
Q ss_pred HHHHHHHHhC-------------CCCCCeEEEEEEcCCCCCC
Q 017373 342 AVLVELAISR-------------GSSDNISVIVVELNKPTKF 370 (372)
Q Consensus 342 ~~L~~~A~~~-------------g~~DNiTvIvv~l~~~~~~ 370 (372)
+.|+..|... |+.|||||.||-|.....+
T Consensus 451 qdlva~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~~~~ 492 (493)
T KOG1323|consen 451 QDLVAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYCAAP 492 (493)
T ss_pred HHHHHHhcCccCCCceeccCCCcCCCCceEEEEEeccCCCCC
Confidence 7787776321 4689999999999876654
No 13
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-24 Score=198.33 Aligned_cols=211 Identities=22% Similarity=0.228 Sum_probs=152.0
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHH----HHHHHHHHHHHHHhccccCCchHHHH
Q 017373 94 KEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEA----CKERMHEVLVEVIAGEEYGEKNIEWE 169 (372)
Q Consensus 94 ~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~----as~~l~~~l~~~~~~~~~~~~~~~~~ 169 (372)
+..||++++..+ ....+.|||||+|||..-.+ .|+.|+....+...... ....++.
T Consensus 89 ~~GEDa~Fvss~------------------~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~--~~~~~P~ 148 (330)
T KOG1379|consen 89 KGGEDAWFVSSN------------------PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSD--FNPSDPV 148 (330)
T ss_pred CCCCcceeeccC------------------cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccc--cCCCChH
Confidence 347999999865 47789999999999865433 45555555555554322 2344788
Q ss_pred HHHHHHHHHHHHHHhcccCCcccccceEEEEEEe--cCeEEEeeeccceEEEEeCCeeeecCCCCCCC--ChHHHHHHHH
Q 017373 170 RVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVG--KEELVVANCGDSRAVLSRGGVVVPLSVDHKPD--RHDELIRVEA 245 (372)
Q Consensus 170 ~~l~~a~~~~~~~i~~~~~~~~~~GtT~~v~~i~--~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~--~~~E~~ri~~ 245 (372)
..|.+++.++..+ +...-++||+++++++ +++||++|+|||...++|+|++++-|..+... .|-++..
T Consensus 149 ~lL~~ay~~l~~~-----~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN~PyQLs~--- 220 (330)
T KOG1379|consen 149 NLLEKAYAELKSQ-----KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFNTPYQLSS--- 220 (330)
T ss_pred HHHHHHHHHHhhc-----CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccCCceeecc---
Confidence 8888888876554 3445578999999998 88999999999999999999999999876531 1110000
Q ss_pred cCCeeeecCCCccccccccccccccccCCCceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHHHHHHHHhhhcccccc
Q 017373 246 AGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKW 325 (372)
Q Consensus 246 ~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~ei~~i~~~~~~~~~~~ 325 (372)
+--....+++|.. ...+.+.+.+.++| +|||+||||||+|.+++|..++......
T Consensus 221 --------------~p~~~~~~~~d~p------~~ad~~~~~v~~GD-vIilATDGlfDNl~e~~Il~il~~~~~~---- 275 (330)
T KOG1379|consen 221 --------------PPEGYSSYISDVP------DSADVTSFDVQKGD-VIILATDGLFDNLPEKEILSILKGLDAR---- 275 (330)
T ss_pred --------------CCccccccccCCc------cccceEEEeccCCC-EEEEecccccccccHHHHHHHHHHhhcc----
Confidence 0000112233331 35678899999999 8889999999999999999999875321
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHhC-----------------------CCCCCeEEEEEEc
Q 017373 326 ASSVNAGNQNPAARAAAVLVELAISR-----------------------GSSDNISVIVVEL 364 (372)
Q Consensus 326 ~~~~~~~~~~~~~~~a~~L~~~A~~~-----------------------g~~DNiTvIvv~l 364 (372)
....++..|+.|++.|.+. |..|+|||||..+
T Consensus 276 -------~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 276 -------GNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred -------ccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 2367888999999887553 4589999999753
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.90 E-value=3.3e-23 Score=211.22 Aligned_cols=248 Identities=27% Similarity=0.401 Sum_probs=211.0
Q ss_pred ccceeeeeeecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhc
Q 017373 79 VTCLSHGTMSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAG 158 (372)
Q Consensus 79 ~~~~~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~ 158 (372)
...+.+|.+...|.|..+--+.....+|.. .....|+++||-+......+...++..++.+....
T Consensus 519 ~~~~t~Gv~~~~gqrnk~c~~~~~v~nf~~---------------~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~ 583 (1081)
T KOG0618|consen 519 AFLWTYGVAGVSGQRNKVCSRAVWVENFFL---------------NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQL 583 (1081)
T ss_pred eeheeeccchhcccccchhhhhhhhhhccc---------------CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHh
Confidence 345788999999998887666555555443 57789999999999999999988999888888764
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHhcccCCcccccceEEEEEEec--------CeEEEeeeccceEEEEeCCeeeecCC
Q 017373 159 EEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGK--------EELVVANCGDSRAVLSRGGVVVPLSV 230 (372)
Q Consensus 159 ~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~GtT~~v~~i~~--------~~l~~anvGDSR~~l~r~g~~~~LT~ 230 (372)
..+-.+.|..+|...++++... ....|..++.+.+.. .++++||+|+|.++++++|+-.++|+
T Consensus 584 ------~~~et~~mr~~fl~~~rklg~~---g~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~ 654 (1081)
T KOG0618|consen 584 ------YGNETEQMRNTFLRLNRKLGEE---GQVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTR 654 (1081)
T ss_pred ------ccChHHHHHHHHHHHhhhhhhh---hccccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccc
Confidence 2222344999999999998544 445566667676643 47899999999999999999999987
Q ss_pred CCC-CCChHHHHHHHHcCCeeeecCCCccccccccccccccccCCCceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHH
Q 017373 231 DHK-PDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNE 309 (372)
Q Consensus 231 DH~-~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~ 309 (372)
-.. ..+++|.+||...+|+|.. .++++|+...||++|.+++.|.|.+.|+|....+++.|+||||++-++|++|+-+
T Consensus 655 ~~~~~v~~eE~~RI~~~~g~i~e--d~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid 732 (1081)
T KOG0618|consen 655 SPMLEVDREEYKRIVDSKGFITE--DNKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSID 732 (1081)
T ss_pred cccccCCHHHHHHHHHhcCeecC--CCeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHH
Confidence 764 3489999999999999974 6889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCC
Q 017373 310 AACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPT 368 (372)
Q Consensus 310 ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~ 368 (372)
++++++++ ..+|-.||++|++.|..+|..||++|+||++....
T Consensus 733 ~a~~~vRn----------------~~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~~~ 775 (1081)
T KOG0618|consen 733 TAVDAVRN----------------VEDPLLAAKKLCDLAQSYGCAENVSVLVVRLNHLE 775 (1081)
T ss_pred HHHHHHhc----------------CCchHHHHHHHHHHHHhcccccCeeEEEEEeecch
Confidence 99999996 37889999999999999999999999999997654
No 15
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.87 E-value=2.9e-21 Score=174.14 Aligned_cols=184 Identities=22% Similarity=0.278 Sum_probs=109.2
Q ss_pred eecccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhccccCCchH
Q 017373 87 MSVIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNI 166 (372)
Q Consensus 87 ~s~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~~~~~~~ 166 (372)
.+++|.+..|||++.+... .+..+++||||+||...++.+|+.+++.+.+.+..........
T Consensus 3 ~sh~~~~~~nqD~~~~~~~------------------~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~ 64 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD------------------DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPS 64 (212)
T ss_dssp ----TTSSS--EEEEEE-T------------------CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred ccccCCCCCCCCCEEeeeC------------------CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchH
Confidence 5788999999999997654 4567779999999999999999999999998887543221111
Q ss_pred HHHHHHHHHHHHHHHHH------hcccCCcccccceEEEEEEecCeEEEeeeccceEE-EEeCCeeeecCCCCCCCChHH
Q 017373 167 EWERVMEGCFGKMDEEV------NRGRLREEMVGSTAVVAVVGKEELVVANCGDSRAV-LSRGGVVVPLSVDHKPDRHDE 239 (372)
Q Consensus 167 ~~~~~l~~a~~~~~~~i------~~~~~~~~~~GtT~~v~~i~~~~l~~anvGDSR~~-l~r~g~~~~LT~DH~~~~~~E 239 (372)
.....+..+...+...+ .........++||++++++.++.++++|+||||+| +.++|.+..++.+|+. +
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~----~ 140 (212)
T PF13672_consen 65 SIEALIRAIKKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG----E 140 (212)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH----H
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc----h
Confidence 12333333333333221 01124566779999999999999999999999996 4689999999999972 1
Q ss_pred HHHHHHcCCeeeecCCCccccccccccccccccCCCceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHH-HHHHHHhh
Q 017373 240 LIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEA-ACQVVRRC 318 (372)
Q Consensus 240 ~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~e-i~~i~~~~ 318 (372)
... .++.+..... ....++..+++.++| .|+|||||||+.|...+ +..++...
T Consensus 141 ~~~---------------------~~~~~~~~~~----~~~~~~~~~~~~~~d-~ilL~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 141 YPN---------------------QTRSLTGDDP----EPDVQYGSIPLEEGD-VILLCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp HHH---------------------CTTSCCHHCC----CTETEEEEEE--TT--EEEEE-HHHHTTS-HHHHHHHH----
T ss_pred hhh---------------------hhhccCcccc----ccCCeEEEEEcCCCC-EEEEECcCccccCCCHHHHHHHhhhc
Confidence 110 1222222110 013356666777888 55799999999998655 77777654
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.78 E-value=3.7e-17 Score=145.18 Aligned_cols=175 Identities=19% Similarity=0.164 Sum_probs=131.4
Q ss_pred CCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Q 017373 94 KEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVME 173 (372)
Q Consensus 94 ~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~~l~ 173 (372)
...-|.+.+.... ++..+++|+||||+...|.+++..+...+.+.... .. .+.
T Consensus 15 ~~~GD~~~~~~~~-----------------~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~------~~----~~~ 67 (193)
T smart00331 15 QVGGDFYDVVKLP-----------------EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSE------GI----SLS 67 (193)
T ss_pred hcCccEEEEEEeC-----------------CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhc------CC----CHH
Confidence 4567888776542 45789999999999999999999999988877653 11 245
Q ss_pred HHHHHHHHHHhcccCCcccccceEEEEEE--ecCeEEEeeeccceEEEEe-CCeeeecCCCCCCCChHHHHHHHHcCCee
Q 017373 174 GCFGKMDEEVNRGRLREEMVGSTAVVAVV--GKEELVVANCGDSRAVLSR-GGVVVPLSVDHKPDRHDELIRVEAAGGRV 250 (372)
Q Consensus 174 ~a~~~~~~~i~~~~~~~~~~GtT~~v~~i--~~~~l~~anvGDSR~~l~r-~g~~~~LT~DH~~~~~~E~~ri~~~gg~v 250 (372)
..+..+|+.+... ....+++|++++++ ..++++++|+||+|+|+++ ++..++++.+.+
T Consensus 68 ~~l~~~n~~l~~~--~~~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~~----------------- 128 (193)
T smart00331 68 QILERLNRAIYEN--GEDGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDLG----------------- 128 (193)
T ss_pred HHHHHHHHHHHhc--CCCCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCCC-----------------
Confidence 5566677777654 34567999999998 6789999999999999998 665555555432
Q ss_pred eecCCCccccccccccccccccCCCceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHHHHHHHHhhhcccccccccCC
Q 017373 251 INWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVN 330 (372)
Q Consensus 251 ~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~ei~~i~~~~~~~~~~~~~~~~ 330 (372)
+.+|.... .+++...+.+.++| .|+|+||||||.+..+++.+++.+.
T Consensus 129 ---------------~~lG~~~~-----~~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~l~~~l~~~------------ 175 (193)
T smart00331 129 ---------------APLGLEPD-----VEVDVRELTLEPGD-LLLLYTDGLTEARNPERLEELLEEL------------ 175 (193)
T ss_pred ---------------ceeeeCCC-----CcceeEEEeeCCCC-EEEEECCCccccCChHHHHHHHHHh------------
Confidence 23453321 24667788899998 6679999999999999999999874
Q ss_pred CCCCchHHHHHHHHHHHHH
Q 017373 331 AGNQNPAARAAAVLVELAI 349 (372)
Q Consensus 331 ~~~~~~~~~~a~~L~~~A~ 349 (372)
...+++++++.|++.+.
T Consensus 176 --~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 176 --LGSPPAEIAQRILEELL 192 (193)
T ss_pred --cCCCHHHHHHHHHHHHh
Confidence 23568888888887654
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.70 E-value=1.8e-15 Score=159.41 Aligned_cols=202 Identities=16% Similarity=0.186 Sum_probs=146.0
Q ss_pred ceeeeeee-cccCCCCCCceEEEecCCCCCCCCCCCCCCCCCCCCCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 017373 81 CLSHGTMS-VIGRRKEMEDAVRVELGCMGGGGGGDGDGDDDDDQKKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGE 159 (372)
Q Consensus 81 ~~~~~~~s-~~G~R~~nEDa~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~ 159 (372)
.+.+|.+. .++.+..+.|.+.+.... ++..+++|+||+|+...|..++..+.+.+.+.....
T Consensus 551 ~~~~g~a~~~k~g~~vsGD~y~~~~l~-----------------~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g 613 (764)
T TIGR02865 551 HVSTGVARAAKDGELVSGDSYSFGKLS-----------------AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESG 613 (764)
T ss_pred eehhhHHHhcCCCCcccCceEEEEEEC-----------------CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 34444432 334467789999876542 466889999999988888888888888877765421
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHhcccCCcccccceEEEEEEe--cCeEEEeeeccceEEEEeCCeeeecCCCCCCCCh
Q 017373 160 EYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVG--KEELVVANCGDSRAVLSRGGVVVPLSVDHKPDRH 237 (372)
Q Consensus 160 ~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~GtT~~v~~i~--~~~l~~anvGDSR~~l~r~g~~~~LT~DH~~~~~ 237 (372)
.+ ...++..+|..+... ....+.+|+.+++++ .+++.++|+|+++.|+.|++.+.+++..+.|
T Consensus 614 ------~~----~~~ai~~lN~~L~~~--~~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP--- 678 (764)
T TIGR02865 614 ------FD----REVAIKTVNSILSLR--STDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP--- 678 (764)
T ss_pred ------CC----HHHHHHHHHHHHHhC--CCCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce---
Confidence 11 244566677666443 223468999999885 6899999999999999999999888765443
Q ss_pred HHHHHHHHcCCeeeecCCCccccccccccccccccCCCceeecCeEEEEEecCCCeEEEEEcCCCCCCCCHHH-----HH
Q 017373 238 DELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVISKPDVMVTERSDRDEFLILASDGLWDVVSNEA-----AC 312 (372)
Q Consensus 238 ~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~e-----i~ 312 (372)
+|-.. . .+++....++.++| +|||+||||||..++.+ +.
T Consensus 679 ------------------------------lGil~--~---~~~~~~~~~L~~GD-~Lll~SDGv~E~~~~~~~~~~~l~ 722 (764)
T TIGR02865 679 ------------------------------IGILD--E---VDVELVRKKLKNGD-LIVMVSDGVLEGEKEVEGKVLWLV 722 (764)
T ss_pred ------------------------------eEecc--C---CccceEEEEeCCCC-EEEEECCCCCcCCcccccHHHHHH
Confidence 22110 1 25667778899999 67899999999887533 56
Q ss_pred HHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCC---CCCCeEEEEEEc
Q 017373 313 QVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRG---SSDNISVIVVEL 364 (372)
Q Consensus 313 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g---~~DNiTvIvv~l 364 (372)
+++.+. ...+|+++++.|++.+.... ..||+|++++++
T Consensus 723 ~~l~~~--------------~~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 723 RKLKET--------------NTNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred HHHHhc--------------CCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 666542 23678999999999998643 479999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.54 E-value=1.4e-12 Score=115.44 Aligned_cols=178 Identities=19% Similarity=0.216 Sum_probs=118.0
Q ss_pred CCeeEEEEEcCCCCcHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHhcccCCcccccceEEEEEEe
Q 017373 124 KKYDFFGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVG 203 (372)
Q Consensus 124 ~~~~l~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~GtT~~v~~i~ 203 (372)
++.++++|+|++|..-.|.+.+..+...+...... ... ....+..+|+.+... .......+|+++++++
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~------~~~----p~~~l~~ln~~l~~~-~~~~~~~~t~~~~~~d 70 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDE------GLD----PEELLEALNRRLYRD-LKGDNRYATACYAIID 70 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHT------TTS----HHHHHHHHHHHHHHH-TTTTSTTEEEEEEEEE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHc------CCC----HHHHHHHHHHHHHHH-hhhccccceEEEEEec
Confidence 57889999999997767777777777777776643 112 344455566666333 1112367888888875
Q ss_pred --cCeEEEeeeccceEEEEeC--CeeeecCCCCCCCChHHHHHHHHcCCeeeecCCCccccccccccccccccCCCceee
Q 017373 204 --KEELVVANCGDSRAVLSRG--GVVVPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFVIS 279 (372)
Q Consensus 204 --~~~l~~anvGDSR~~l~r~--g~~~~LT~DH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v~~ 279 (372)
.+.++++|+|++++++++. +....+.....+ +|-..- .
T Consensus 71 ~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~~---------------------------------lG~~~~-----~ 112 (193)
T PF07228_consen 71 PETGTLTYANAGHPPPLLLRPGGREIEQLESEGPP---------------------------------LGIFED-----I 112 (193)
T ss_dssp TTTTEEEEEEESSSEEEEEETTCTEEEEETCSSBB---------------------------------CSSSCT-----T
T ss_pred ccceEEEEeCCCCCCEEEEeccccceeecccCccc---------------------------------eeeecc-----c
Confidence 5689999999999999998 444444333222 332110 2
Q ss_pred cCeEEEEEecCCCeEEEEEcCCCCCCCCHH-------HHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhC-
Q 017373 280 KPDVMVTERSDRDEFLILASDGLWDVVSNE-------AACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISR- 351 (372)
Q Consensus 280 ~P~i~~~~l~~~D~~LIL~SDGv~d~ls~~-------ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~- 351 (372)
.+....+.+.++| .|+|+||||+|....+ .+.+++... ...+++++++.|++.+...
T Consensus 113 ~~~~~~~~l~~gd-~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~--------------~~~~~~~~~~~l~~~~~~~~ 177 (193)
T PF07228_consen 113 DYQEQEIQLEPGD-RLLLYTDGLFEALNEDGEFFGEERLLELLDEN--------------RGLSPQEIIDALLEAIDRFG 177 (193)
T ss_dssp CEEEEEEE--TTE-EEEEECHHHCTTTCHHCHHCCCHHHHHHHHCH--------------TTS-HHHHHHHHHHHHHHHT
T ss_pred cccceEEEecccc-EEEEeCCChhhccCCccchhHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHHHHhc
Confidence 4455677888988 6779999999998544 334555432 2367899999999988763
Q ss_pred --CCCCCeEEEEEEcC
Q 017373 352 --GSSDNISVIVVELN 365 (372)
Q Consensus 352 --g~~DNiTvIvv~l~ 365 (372)
...||+|+++++++
T Consensus 178 ~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 178 KGPLRDDITVLVIRRQ 193 (193)
T ss_dssp TSSTSS-EEEEEEEE-
T ss_pred CCCCCCceEEEEEEEC
Confidence 47899999999874
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.49 E-value=2.2e-05 Score=76.80 Aligned_cols=177 Identities=18% Similarity=0.193 Sum_probs=113.3
Q ss_pred CCeeEEEEEcCCC-CcHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHhcccCCcccccceEEEEEE
Q 017373 124 KKYDFFGVYDGHG-GARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVV 202 (372)
Q Consensus 124 ~~~~l~~V~DG~G-G~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~GtT~~v~~i 202 (372)
.....++|.|.+| |-.++-. ..+.....+.+... ....+.+ .+..+|+.+..... ..+-+|+..+++
T Consensus 173 ~~~~~i~I~DvsG~Gv~aal~--m~~~~~~~~~~~~~----~~~~p~~----~l~~~n~~~~~~~~--~~~f~T~~~~~~ 240 (367)
T COG2208 173 EKRLRIGIGDVSGKGVPAALL--MLMPKLALRLLLES----GPLDPAD----VLETLNRVLKQNLE--EDMFVTLFLGVY 240 (367)
T ss_pred CcEEEEEEEeccCCCHHHHHH--HHHHHHHHHHhhhc----ccCCHHH----HHHHHHHHHHhccc--CCcEEEEEEEEE
Confidence 3678899999999 5554443 33333333333321 0222222 34445555544411 226788888887
Q ss_pred e--cCeEEEeeeccceEEEEeCCee---eecCCCCCCCChHHHHHHHHcCCeeeecCCCccccccccccccccccCCCce
Q 017373 203 G--KEELVVANCGDSRAVLSRGGVV---VPLSVDHKPDRHDELIRVEAAGGRVINWNGPRILGVLATSRSIGDQYLKPFV 277 (372)
Q Consensus 203 ~--~~~l~~anvGDSR~~l~r~g~~---~~LT~DH~~~~~~E~~ri~~~gg~v~~~~~~r~~g~l~vtRaiGd~~~k~~v 277 (372)
+ .+.+.++|+|---.++++.+.. ..++. ....+|...-
T Consensus 241 d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~---------------------------------~g~piG~~~~---- 283 (367)
T COG2208 241 DLDSGELTYSNAGHEPALILSADGEIEVEDLTA---------------------------------LGLPIGLLPD---- 283 (367)
T ss_pred eccCCEEEEeeCCCCCeeEEEcCCCceeEEccC---------------------------------CCceeeecCC----
Confidence 5 5799999999999988886442 33322 2233553311
Q ss_pred eecCeEEEEEecCCCeEEEEEcCCCCC-------CCCHHHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHh
Q 017373 278 ISKPDVMVTERSDRDEFLILASDGLWD-------VVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAIS 350 (372)
Q Consensus 278 ~~~P~i~~~~l~~~D~~LIL~SDGv~d-------~ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~ 350 (372)
..+.+...++.++| .|||.||||.+ .+..+...+++... ...+++++++.+.+...+
T Consensus 284 -~~~~~~~~~l~~gd-~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~--------------~~~~~~e~~~~i~~~l~~ 347 (367)
T COG2208 284 -YQYEVASLQLEPGD-LLVLYTDGVTEARNSDGEFFGLERLLKILGRL--------------LGQPAEEILEAILESLEE 347 (367)
T ss_pred -ccchheeEEecCCC-EEEEEcCCeeeeecCCccEecHHHHHHHHHHH--------------hCCCHHHHHHHHHHHHHH
Confidence 25566677888877 78899999999 57777888888753 246788888888887654
Q ss_pred C----CCCCCeEEEEEEcC
Q 017373 351 R----GSSDNISVIVVELN 365 (372)
Q Consensus 351 ~----g~~DNiTvIvv~l~ 365 (372)
. ...||+|++++++.
T Consensus 348 ~~~~~~~~DDiTll~lk~~ 366 (367)
T COG2208 348 LQGDQIQDDDITLLVLKVK 366 (367)
T ss_pred hhCCccccCceEEEEEEec
Confidence 3 34688999999875
No 20
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=39.87 E-value=44 Score=23.46 Aligned_cols=27 Identities=19% Similarity=0.299 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHH
Q 017373 306 VSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVEL 347 (372)
Q Consensus 306 ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~ 347 (372)
-+++||..++..| ..+|.+++++|+.+
T Consensus 19 hse~eIya~L~ec---------------nMDpnea~qrLL~q 45 (60)
T PF06972_consen 19 HSEEEIYAMLKEC---------------NMDPNEAVQRLLSQ 45 (60)
T ss_pred CCHHHHHHHHHHh---------------CCCHHHHHHHHHhc
Confidence 6899999999986 57899999999874
No 21
>COG1539 FolB Dihydroneopterin aldolase [Coenzyme metabolism]
Probab=38.02 E-value=1.6e+02 Score=23.95 Aligned_cols=62 Identities=18% Similarity=0.299 Sum_probs=48.6
Q ss_pred EEcCCCCCCCCHHHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCCCC
Q 017373 297 LASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPTKF 370 (372)
Q Consensus 297 L~SDGv~d~ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~~~ 370 (372)
..||=+-|.+.-.++.+.+.+.+.+. ...-.+.+|+.+.+..+.+- ..++.+=|.+.+|..+
T Consensus 43 ~~~Ddl~dtl~Y~~v~~~i~~~v~~~----------~~~LiE~lA~~ia~~l~~~~--~~v~~~~v~v~KP~ap 104 (121)
T COG1539 43 AESDDLADTLNYAEVSELIKEIVEGK----------RFALIETLAEEIADLLLARF--PRVELVEVKVTKPKAP 104 (121)
T ss_pred cCccchhheecHHHHHHHHHHHHhCC----------ccchHHHHHHHHHHHHHhhC--CccEEEEEEEECCCCC
Confidence 56888999999999999999887643 23566788888888887764 6788887888877654
No 22
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=31.95 E-value=3.2e+02 Score=23.24 Aligned_cols=68 Identities=9% Similarity=0.059 Sum_probs=42.1
Q ss_pred CCCeEEEEEcCCCCCCCCHHHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhC-CCCCCeEEEEEEcC
Q 017373 290 DRDEFLILASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISR-GSSDNISVIVVELN 365 (372)
Q Consensus 290 ~~D~~LIL~SDGv~d~ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~-g~~DNiTvIvv~l~ 365 (372)
+++.++++..||.-.-+.-..+...+...+..... ...++.++.+.+-+..... ....-+|++++.++
T Consensus 27 ~~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~--------~~~~~~~~l~~~n~~l~~~~~~~~~~T~~~~~id 95 (193)
T smart00331 27 PEGRLLIAIADVMGKGLAAALAMSMARSALRTLLS--------EGISLSQILERLNRAIYENGEDGMFATLFLALYD 95 (193)
T ss_pred CCCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhh--------cCCCHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE
Confidence 44457889999999887777766666554443211 1134667776665555444 33456777777764
No 23
>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed
Probab=31.07 E-value=2.3e+02 Score=22.89 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=35.6
Q ss_pred CCceeecCeEEEEEecCCCeEEEEEcCCCCC-------CCCHHHHHHHHHhh
Q 017373 274 KPFVISKPDVMVTERSDRDEFLILASDGLWD-------VVSNEAACQVVRRC 318 (372)
Q Consensus 274 k~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d-------~ls~~ei~~i~~~~ 318 (372)
+.+++..|+++..+....+.|.|++..-.-+ .+++++|.-++.++
T Consensus 36 ~~~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~~~~~i~~edI~lv~~q~ 87 (115)
T PRK06369 36 KEIVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAEKEVEIPEEDIELVAEQT 87 (115)
T ss_pred EEEEEcCCeEEEEecCCCcEEEEEeccEEeeccccccCCCCHHHHHHHHHHH
Confidence 4678899999998888888898888877654 47888888777663
No 24
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=30.84 E-value=28 Score=25.55 Aligned_cols=21 Identities=19% Similarity=0.268 Sum_probs=14.5
Q ss_pred CCCeEEEEEcCCCCCCCCHHHH
Q 017373 290 DRDEFLILASDGLWDVVSNEAA 311 (372)
Q Consensus 290 ~~D~~LIL~SDGv~d~ls~~ei 311 (372)
+|.+| |+++||+|=.+...-+
T Consensus 26 ~G~Rl-lva~nGv~lEv~r~WL 46 (72)
T PF09436_consen 26 PGHRL-LVASNGVFLEVRRPWL 46 (72)
T ss_pred CCcEE-EEecCcEEEEEechHH
Confidence 56655 6999999966554433
No 25
>cd00534 DHNA_DHNTPE Dihydroneopterin aldolase (DHNA) and 7,8-dihydroneopterin triphosphate epimerase domain (DHNTPE); these enzymes have been designated folB and folX, respectively. Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids, as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is DHNA which catalyses the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate. Though it is known that DHNTPE catalyzes the epimerization of dihydroneopterin triphosphate to dihydromonapterin triphosphate, the biological role of this enzyme is still unclear. It is hypothesized that it is not an essential protein since a folX knockout in E. coli has a normal phenoty
Probab=30.33 E-value=1.8e+02 Score=23.04 Aligned_cols=60 Identities=18% Similarity=0.294 Sum_probs=41.8
Q ss_pred EEcCCCCCCCCHHHHHHHHHhhhcccccccccCCCCCCchHHHHHHHHHHHHHhCCCCCCeEEEEEEcCCCC
Q 017373 297 LASDGLWDVVSNEAACQVVRRCFSGRIKWASSVNAGNQNPAARAAAVLVELAISRGSSDNISVIVVELNKPT 368 (372)
Q Consensus 297 L~SDGv~d~ls~~ei~~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~g~~DNiTvIvv~l~~~~ 368 (372)
-.||-+-+.++...+.+.+...+... .....+.+|+.|.+..+... +.+.-+-|++.++.
T Consensus 42 ~~~D~l~~tidY~~l~~~i~~~~~~~----------~~~llE~La~~ia~~i~~~~--~~v~~v~v~v~K~~ 101 (118)
T cd00534 42 GESDDLADTLNYAEVAKLIKKIVEGS----------PFKLIETLAEEIADILLEDY--PKVSAIKVKVEKPN 101 (118)
T ss_pred hccCChhhccCHHHHHHHHHHHHhCC----------CHhHHHHHHHHHHHHHHHhC--CCceEEEEEEECCC
Confidence 46888889999999999988765431 23678889999999888762 33444444444443
No 26
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=28.20 E-value=41 Score=26.10 Aligned_cols=30 Identities=17% Similarity=0.339 Sum_probs=23.1
Q ss_pred EecCCCeEEEEEcCCCCCCCCHHHHHHHHHh
Q 017373 287 ERSDRDEFLILASDGLWDVVSNEAACQVVRR 317 (372)
Q Consensus 287 ~l~~~D~~LIL~SDGv~d~ls~~ei~~i~~~ 317 (372)
-+.++|.+ +|+.|||+-.+...+..+-++.
T Consensus 21 ~l~~~D~v-lL~qdGV~aAl~~~~~~~sl~~ 50 (96)
T COG2168 21 LLTEGDAV-LLLQDGVYAALKGNRYLASLRE 50 (96)
T ss_pred HhcccCeE-EEEcccchhhhcCcHHHHHHhc
Confidence 34678855 6999999999888877776664
No 27
>TIGR00722 ttdA_fumA_fumB hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region. A number of Fe-S cluster-containing hydro-lyases share a conserved motif, including argininosuccinate lyase, adenylosuccinate lyase, aspartase, class I fumarate hydratase (fumarase), and tartrate dehydratase. This model represents a subset of closely related proteins or modules, including the E. coli tartrate dehydratase alpha chain and the N-terminal region of the class I fumarase (where the C-terminal region is homologous to the tartrate dehydratase beta chain). The activity of archaeal proteins in this subfamily has not been established.
Probab=22.80 E-value=1.7e+02 Score=27.39 Aligned_cols=76 Identities=16% Similarity=0.051 Sum_probs=38.2
Q ss_pred EEEEcCCCCcHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHhcccCCcccccceEEEEEEecCeEE
Q 017373 129 FGVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELV 208 (372)
Q Consensus 129 ~~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~GtT~~v~~i~~~~l~ 208 (372)
+.|.=|+||. .+.|+.++-+.+.+.+.....+.....+++ +.++.+|+. -- .+....+.||++.+.|...--+
T Consensus 179 ~~vGVGIGGt--~d~aa~LaK~Allr~ig~~n~d~~~a~lE~---elle~iN~l-GI-Gp~GlGG~tTal~V~Ie~~p~H 251 (273)
T TIGR00722 179 IIVGVGIGGS--FETAAKLAKKALLRPIGERHPNPKIAKLEL---ELLEEINSL-GI-GPMGLGGKTTALDVKIESAHCH 251 (273)
T ss_pred CeEEEEeCCC--HHHHHHHHHHHhhhhhccCCCChhHHHHHH---HHHHHHHhc-Cc-CCCccCCCeEEEEEEEeecCCc
Confidence 3444478884 467777777777776653222211222222 222233322 11 2344566777887777654444
Q ss_pred Eee
Q 017373 209 VAN 211 (372)
Q Consensus 209 ~an 211 (372)
++.
T Consensus 252 ~As 254 (273)
T TIGR00722 252 TAS 254 (273)
T ss_pred ccC
Confidence 333
No 28
>PRK06246 fumarate hydratase; Provisional
Probab=20.61 E-value=1.5e+02 Score=27.81 Aligned_cols=74 Identities=15% Similarity=0.050 Sum_probs=37.0
Q ss_pred EEEcCCCCcHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHhcccCCcccccceEEEEEEecCeEEE
Q 017373 130 GVYDGHGGARVAEACKERMHEVLVEVIAGEEYGEKNIEWERVMEGCFGKMDEEVNRGRLREEMVGSTAVVAVVGKEELVV 209 (372)
Q Consensus 130 ~V~DG~GG~~~~~~as~~l~~~l~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~GtT~~v~~i~~~~l~~ 209 (372)
.|.=|+||. .+.|+.++-+.+.+.+..... .....++=++.+..+|.. -- .+....+.||++.+.|...--++
T Consensus 187 ~vGVGIGGt--~d~a~~laK~Allr~i~~~n~---~~~~a~lE~eLl~~iN~l-GI-Gp~GlGG~tTal~V~Ie~~p~H~ 259 (280)
T PRK06246 187 IVGVGIGGT--FDKAAKLAKKALLRPIGERNP---DPEIAALEEELLEEINKL-GI-GPMGLGGKTTALDVKIETYPCHI 259 (280)
T ss_pred eEEEEeCCC--HHHHHHHHHHHhcCcccCCCC---ChHHHHHHHHHHHHHHhc-Cc-CCCccCCceEEEEEEEeecCCcc
Confidence 344478886 667777777776665553222 112222222222222221 11 24445567788877776544443
Q ss_pred e
Q 017373 210 A 210 (372)
Q Consensus 210 a 210 (372)
+
T Consensus 260 A 260 (280)
T PRK06246 260 A 260 (280)
T ss_pred c
Confidence 3
No 29
>TIGR00264 alpha-NAC-related protein. This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.
Probab=20.43 E-value=4.6e+02 Score=21.15 Aligned_cols=45 Identities=13% Similarity=0.296 Sum_probs=35.2
Q ss_pred CCceeecCeEEEEEecCCCeEEEEEcCCCCC-----CCCHHHHHHHHHhh
Q 017373 274 KPFVISKPDVMVTERSDRDEFLILASDGLWD-----VVSNEAACQVVRRC 318 (372)
Q Consensus 274 k~~v~~~P~i~~~~l~~~D~~LIL~SDGv~d-----~ls~~ei~~i~~~~ 318 (372)
+.+++..|.+...+......|-|+++.-.-+ .+++++|.-+..++
T Consensus 40 k~ivf~~p~V~~m~~~G~~tYqI~G~~~~~~~~~~~~i~~eDI~lV~eq~ 89 (116)
T TIGR00264 40 EEWIFENPKVQVMDILGVKTYQITGKPKKEKVEEEEEITEDDIELVMKQC 89 (116)
T ss_pred ceEEEecCeeEEEecCCcEEEEEecccEEeecccccCCCHHHHHHHHHHh
Confidence 4567889999999988888888888777644 48888888877764
No 30
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=20.25 E-value=1.9e+02 Score=16.53 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=16.4
Q ss_pred EEEecCeEEEeeeccceEEEE
Q 017373 200 AVVGKEELVVANCGDSRAVLS 220 (372)
Q Consensus 200 ~~i~~~~l~~anvGDSR~~l~ 220 (372)
++-.++.+|++-.|..|+..+
T Consensus 8 av~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 8 AVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEETTSEEEEEECCCTEEEEE
T ss_pred EEeCCCCEEEEECCCCEEEEC
Confidence 444788999999999888654
Done!