BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017375
(372 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q89VX9|GLND_BRAJA [Protein-PII] uridylyltransferase OS=Bradyrhizobium japonicum
(strain USDA 110) GN=glnD PE=3 SV=2
Length = 929
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 48 HTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPE 107
+T IE++G DRPGLL E++ ++ L N+ SA V T RA + VTD G I+ P
Sbjct: 848 YTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQINAPT 906
Query: 108 RLSVIKELLCNVLKG 122
R S IK L +V+ G
Sbjct: 907 RQSAIKSALTHVMAG 921
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 85/206 (41%), Gaps = 36/206 (17%)
Query: 39 SVGVKQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTH-NTRAAALMQVT-- 95
+VG + T + + +D P LLS ++ N+V A+++T + RA + ++
Sbjct: 729 NVGFDEVRGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISRE 788
Query: 96 ---DEETGGAISDPERLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADR 152
DE+ G R + I E++ +VL+G K + + V R F
Sbjct: 789 YDRDEDEG------RRATRIGEMIEDVLEG-------KLRLPEVVARRTVRSKARPFV-- 833
Query: 153 DYERTGTDDDSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH 212
P V + N + Y+V+ ++ DRP L+++ ++ + +
Sbjct: 834 ---------------IEPEVTINNQWSDRYTVIEVSGLDRPGLLYELTTAISKLNLNIAS 878
Query: 213 ANIDAEGPEAYQEYFIRHIDGSPVKS 238
A++ G A +++ + G+ + +
Sbjct: 879 AHVATFGERARDVFYVTDLLGAQINA 904
>sp|Q1QRM1|GLND_NITHX [Protein-PII] uridylyltransferase OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=glnD PE=3 SV=1
Length = 931
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 48 HTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPE 107
HT IE++G DRPGLL +++A ++ L N+ SA V T RA + VTD G I+ P
Sbjct: 849 HTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTD-LLGARITAPT 907
Query: 108 RLSVIKELLCNVL 120
R + IK L ++L
Sbjct: 908 RQAAIKRALIHLL 920
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 87/222 (39%), Gaps = 41/222 (18%)
Query: 39 SVGVKQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVT--- 95
+VG ++ T + + +D P LLS ++ N+V A+++T T AL +
Sbjct: 729 NVGFDEARGVTELTIFAADHPWLLSIIAGACASAGANIVDAQIYT-TTDGQALDTIAISR 787
Query: 96 ----DEETGGAISDPERLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFAD 151
DE+ G R + I E++ V+ G L +V + RL +
Sbjct: 788 EYDRDEDEG------RRAARIGEIIEQVIDGR----LRLPDVVARRAAGKTRLRPFVV-- 835
Query: 152 RDYERTGTDDDSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVF 211
P V V N + ++V+ ++ DRP L+F ++ + +
Sbjct: 836 -----------------EPKVIVNNQWSDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIA 878
Query: 212 HANIDAEGPEAYQEYFIRHIDG----SPVKSDAERERVIQCL 249
A++ G A +++ + G +P + A + +I L
Sbjct: 879 SAHVATFGERARDVFYVTDLLGARITAPTRQAAIKRALIHLL 920
>sp|Q3SWE0|GLND_NITWN [Protein-PII] uridylyltransferase OS=Nitrobacter winogradskyi
(strain Nb-255 / ATCC 25391) GN=glnD PE=3 SV=1
Length = 925
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 48 HTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPE 107
HT IE++G DRPGLL +++ ++ L N+ SA V T RA + VTD G I+ P
Sbjct: 847 HTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGARITAPT 905
Query: 108 RLSVIKELLCNVLKGSNKS 126
R + IK L ++L N +
Sbjct: 906 RQAAIKRALVHLLASGNTA 924
>sp|A4YKP3|GLND_BRASO [Protein-PII] uridylyltransferase OS=Bradyrhizobium sp. (strain
ORS278) GN=glnD PE=3 SV=1
Length = 931
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 39 SVGVKQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEE 98
S+ + S +T IE++G DRPGLL E++ ++ L N+ SA V T RA + VTD
Sbjct: 840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-L 898
Query: 99 TGGAISDPERLSVIKELLCNVLKGSNKSG 127
G I+ P R + IK L ++L + +
Sbjct: 899 LGAQINAPTRQAAIKSALLHLLASEDAAA 927
Score = 38.9 bits (89), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 39 SVGVKQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTH-NTRAAALMQVT-- 95
+VG + T + + D P LLS ++ N+V A+++T + RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 96 ---DEETGGAISDPERLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADR 152
DE+ G R + I E + VL+G ++ D
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-----------------------KLRLPDA 819
Query: 153 DYERTGTDDDSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH 212
RT P V++ N + + Y+V+ ++ DRP L+++ ++ + +
Sbjct: 820 VARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIAS 879
Query: 213 ANIDAEGPEAYQEYFIRHIDGSPVKS 238
A++ G A +++ + G+ + +
Sbjct: 880 AHVATFGERARDVFYVTDLLGAQINA 905
>sp|A5ETJ9|GLND_BRASB [Protein-PII] uridylyltransferase OS=Bradyrhizobium sp. (strain
BTAi1 / ATCC BAA-1182) GN=glnD PE=3 SV=1
Length = 931
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 39 SVGVKQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEE 98
S+ + S +T IE++G DRPGLL E++ ++ L N+ SA V T RA + VTD
Sbjct: 840 SINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-L 898
Query: 99 TGGAISDPERLSVIKELLCNVL 120
G I+ P R + IK L ++L
Sbjct: 899 LGAQINAPTRQAAIKSALLHLL 920
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 35/206 (16%)
Query: 39 SVGVKQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTH-NTRAAALMQVT-- 95
+VG + T + + D P LLS ++ N+V A+++T + RA + ++
Sbjct: 729 NVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAISRE 788
Query: 96 ---DEETGGAISDPERLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADR 152
DE+ G R + I E + VL+G ++ D
Sbjct: 789 YERDEDEG------RRATRIGETIEQVLEG-----------------------KLRLPDA 819
Query: 153 DYERTGTDDDSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH 212
RT P V++ N + + Y+V+ ++ DRP L+++ ++ + +
Sbjct: 820 VARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNIAS 879
Query: 213 ANIDAEGPEAYQEYFIRHIDGSPVKS 238
A++ G A +++ + G+ + +
Sbjct: 880 AHVATFGERARDVFYVTDLLGAQINA 905
>sp|P62223|GLND_RHOPA [Protein-PII] uridylyltransferase OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=glnD PE=3 SV=1
Length = 929
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 48 HTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPE 107
+T IE++G DRPGLL +++ ++ L N+ SA V T RA + VTD G I+ P
Sbjct: 847 YTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQITAPT 905
Query: 108 RLSVIKELLCNVLKGSNKS 126
R + IK L ++L + +
Sbjct: 906 RQAAIKRALVHLLANGDAA 924
Score = 38.9 bits (89), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/217 (18%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 39 SVGVKQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTH-NTRAAALMQVT-- 95
+VG ++ T + + D P LLS ++ N+V A+++T + RA + ++
Sbjct: 725 NVGFDEARAVTELTILAVDHPWLLSVIAGACASAGANIVDAQIYTTTDGRALDTISISRE 784
Query: 96 ---DEETGGAISDPERLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADR 152
DE+ G R + I E + VL+G K L + + + ++ +L +
Sbjct: 785 YDRDEDEG------RRATRIGETIEEVLEG--KLRLPEAVARRASSGSKAKLRAFVV--- 833
Query: 153 DYERTGTDDDSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH 212
P V + N + Y+V+ ++ DRP L++ ++ + +
Sbjct: 834 ----------------EPEVEINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIAS 877
Query: 213 ANIDAEGPEAYQEYFIRHIDGSPVKSDAERERVIQCL 249
A++ G A +++ + G+ + + + + + L
Sbjct: 878 AHVATFGERARDVFYVTDLLGAQITAPTRQAAIKRAL 914
>sp|Q2RNG2|GLND_RHORT [Protein-PII] uridylyltransferase OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=glnD PE=3 SV=1
Length = 936
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 26/208 (12%)
Query: 57 DRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPERLSVIKELL 116
D PGL S+++ + N++ A++ T + A + G AI ER++ + + +
Sbjct: 735 DHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDIFTVQTLEGHAIEKEERIARLAKTV 794
Query: 117 CNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEKQRPNVNVVN 176
+VL G L K Q ER H + P V V N
Sbjct: 795 RDVLTGDLP--LEKALRRQPPRLPERTRHLTV--------------------PPRVIVDN 832
Query: 177 CYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYFIRHIDGSPV 236
K ++V+ I +DRP ++ LTD+ + A + G ++++ + G +
Sbjct: 833 QASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVKDVFGMKI 892
Query: 237 KSDAERERVIQCLKAAI----ERRVSEG 260
A+ ++ + L+AAI R+V EG
Sbjct: 893 VHRAKLAQIREALEAAITQTVPRKVEEG 920
Score = 40.0 bits (92), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 43 KQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGA 102
+ S HT IE+ G DRPG L V+ LT + + SA V T+ R V D G
Sbjct: 833 QASKTHTVIEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVKD-VFGMK 891
Query: 103 ISDPERLSVIKELL 116
I +L+ I+E L
Sbjct: 892 IVHRAKLAQIREAL 905
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVD-----AK 317
+E+ DR G L VTR + ++ ++ A V+T + V++FYV G + A+
Sbjct: 841 IEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVKDVFGMKIVHRAKLAQ 900
Query: 318 IIDSIRQSIGQTI 330
I +++ +I QT+
Sbjct: 901 IREALEAAITQTV 913
>sp|Q5FPT6|GLND_GLUOX [Protein-PII] uridylyltransferase OS=Gluconobacter oxydans (strain
621H) GN=glnD PE=3 SV=1
Length = 949
Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 48 HTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPE 107
HT IE+ G DRPGLL +V++ L+ + SA + T+ RA + V D G I+DP
Sbjct: 868 HTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVRD-LLGMKITDPV 926
Query: 108 RLSVIKELLCNVL 120
RL+ ++E L L
Sbjct: 927 RLARLRETLLASL 939
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 31/211 (14%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T + + +D PGL S+++ L ++V A + T + A V D E G + +P
Sbjct: 756 TELTVLCADHPGLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQDGE-GCSFEEPH 814
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTH--TERRLHQMMFADRDYERTGTDDDSLD 165
+L + L+ L G L + +D +H T RR+ +
Sbjct: 815 QLGRLNHLVEQALSGR----LDIRKGIEDASHHSTSRRMRAIHVP--------------- 855
Query: 166 EKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQE 225
P V + N ++V+ + +DRP L+ D L+ + A+I G A
Sbjct: 856 ----PRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDV 911
Query: 226 YFIRHIDG----SPVKSDAERERVIQCLKAA 252
+++R + G PV+ RE ++ L +A
Sbjct: 912 FYVRDLLGMKITDPVRLARLRETLLASLTSA 942
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLL +VT SL ++ A + T +AV+ FYV G KI D +
Sbjct: 871 IEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVRDLLGM----KITDPV 926
Query: 323 R 323
R
Sbjct: 927 R 927
>sp|Q98C27|GLND_RHILO [Protein-PII] uridylyltransferase OS=Rhizobium loti (strain
MAFF303099) GN=glnD PE=3 SV=1
Length = 933
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
+ IE+ G DRPGLLSE++ L+ L ++ SA + T + VTD TG I P R
Sbjct: 847 SVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPAR 905
Query: 109 LSVIKELLCNVLKG--SNKSGLAK 130
++ I+ L L+G + G AK
Sbjct: 906 IATIRNRLMATLEGIAPERGGKAK 929
Score = 38.5 bits (88), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKI-IDS 321
+E+ DR GLLS +T + SL + A + T K ++TFYV +G +D+ I +
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIAT 908
Query: 322 IRQSIGQTI 330
IR + T+
Sbjct: 909 IRNRLMATL 917
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 77/206 (37%), Gaps = 23/206 (11%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T I + D P LLS ++ N+V A+++T A + E + R
Sbjct: 736 TEITVLAQDHPRLLSVIAGACVGAGGNIVDAQIFTTADGRALDTILISREFDRDEDERRR 795
Query: 109 LSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEKQ 168
+ L+ +VL G KS L + M R + G +
Sbjct: 796 AERVGRLIEDVLSG--KSWLPE-----------------MIEKRTKPKRGAKVFKIP--- 833
Query: 169 RPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYFI 228
P + N +SV+ + DRP L+ + TL+D+ + A+I G + +++
Sbjct: 834 -PRAEIRNTLSNRFSVIEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYV 892
Query: 229 RHIDGSPVKSDAERERVIQCLKAAIE 254
+ G + S A + L A +E
Sbjct: 893 TDLTGQKIDSPARIATIRNRLMATLE 918
>sp|A4XWU3|GLND_PSEMY [Protein-PII] uridylyltransferase OS=Pseudomonas mendocina (strain
ymp) GN=glnD PE=3 SV=1
Length = 899
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 27/138 (19%)
Query: 231 IDGSPVKSDAERERVIQCLK------AAIERRVSEGLK--------------------LE 264
I +P + RE +I+ LK I+RRV LK LE
Sbjct: 759 IGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQVTIHNDAQRPVTILE 818
Query: 265 LCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPV-DAKIIDSIR 323
L DR GLL+ + RIF E L++ A++AT + + F+V A+ P+ D ++ ++
Sbjct: 819 LTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTDANNQPLSDPELCARLQ 878
Query: 324 QSIGQTILKVKGNPEDLK 341
++I + + + P+ L+
Sbjct: 879 ETIVRRLSEPSAQPQSLQ 896
Score = 39.7 bits (91), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 30/212 (14%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISD-PE 107
T I + D+ + A ++ L N+ A + T ++ V + GG+I D P
Sbjct: 705 TQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGDNPA 764
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R+ I+E L LK ++ T + + V R+L FA
Sbjct: 765 RIKQIREGLIEALKNPDEY---PTIIQRRVP---RQLKHFAFA----------------- 801
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N + +++ +T+ DRP L+ + + +A I G +F
Sbjct: 802 --PQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFF 859
Query: 228 IRHIDGSPVKSDAERERVIQCLKAAIERRVSE 259
+ + P+ SD E + L+ I RR+SE
Sbjct: 860 VTDANNQPL-SDPE---LCARLQETIVRRLSE 887
>sp|A6WV84|GLND_OCHA4 [Protein-PII] uridylyltransferase OS=Ochrobactrum anthropi (strain
ATCC 49188 / DSM 6882 / NCTC 12168) GN=glnD PE=3 SV=1
Length = 934
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DRPGLLSE++ +++ L ++ SA + T + VTD G IS+ R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 109 LSVIKELLCNVLKGSNKS 126
I+ L VL G N S
Sbjct: 906 QGNIRRKLLGVLSGENGS 923
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K +++FYV G+ KI ++
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNAT 904
Query: 323 RQ 324
RQ
Sbjct: 905 RQ 906
Score = 32.3 bits (72), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 74/195 (37%), Gaps = 24/195 (12%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T I + D P LLS ++ N+V A+++T A + E + R
Sbjct: 736 TEITVLAPDHPRLLSIITGACAAAGANIVDAQIFTTGDGRALDTILISREFDTDDDERRR 795
Query: 109 LSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEKQ 168
+ +++ +VL G + D +RT + K
Sbjct: 796 AERVGKVIEDVLSG-----------------------KAHLPDVLAKRTKPKRAAKAFKV 832
Query: 169 RPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYFI 228
P V + N ++V+ + DRP L+ + ++D+ + A+I G + +++
Sbjct: 833 EPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYV 892
Query: 229 RHIDGSPVKSDAERE 243
+ G + S+A R+
Sbjct: 893 TDLVGHKI-SNATRQ 906
>sp|Q8RQD1|GLND_AZOBR [Protein-PII] uridylyltransferase OS=Azospirillum brasilense
GN=glnD PE=3 SV=1
Length = 933
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 45 SMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAIS 104
S HT IE+ G DRPGLL +++ LT+L + SA++ T+ +A + V D G ++
Sbjct: 854 STTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKD-VFGLKVT 912
Query: 105 DPERLSVIKELLCNVL 120
+L+ I+E L + L
Sbjct: 913 HENKLAQIRERLLHAL 928
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 27/206 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTH-NTRAAALMQVTDEETGGAISDPE 107
T + + +D GL S ++ L ++V A ++T N A + V D GGA +
Sbjct: 745 TEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAFESGD 804
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
+L+ + ++ VL G K T+ R H
Sbjct: 805 KLAKLSVMIEKVLSGQLKPLHDLTKRKAPHASRTRVFHVP-------------------- 844
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N ++V+ + +DRP L++D LT++ + A I G +A ++
Sbjct: 845 --PRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFY 902
Query: 228 IRHIDGSPVKSDAE----RERVIQCL 249
++ + G V + + RER++ L
Sbjct: 903 VKDVFGLKVTHENKLAQIRERLLHAL 928
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPV 314
+E+ DR GLL ++TR +L ++ A+++T KA++ FYV G V
Sbjct: 860 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFGLKV 911
>sp|Q9RAE4|GLND_RHILV [Protein-PII] uridylyltransferase OS=Rhizobium leguminosarum bv.
viciae GN=glnD PE=3 SV=2
Length = 944
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T I + D P LL+ ++ N+V A+++T + RA + V+ E T A +
Sbjct: 727 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 785
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R + I ++ +VL G +RL +++ A R R + +
Sbjct: 786 RAATIGRMIEDVLSG------------------RKRLPEVI-ATRARNRKKSKAFVIP-- 824
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P+VN+ N ++V+ + DRP L+ + L+D+ + A I G + ++
Sbjct: 825 --PSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFY 882
Query: 228 IRHIDGSPVKSDAERERVIQCLKAAI 253
+ + G + D++R + +KA +
Sbjct: 883 VTDLVGQKISGDSKRANITARMKAVM 908
Score = 38.1 bits (87), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K ++TFYV G + DS
Sbjct: 840 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG---DSK 896
Query: 323 RQSIGQTILKVKGNPED 339
R +I + V ED
Sbjct: 897 RANITARMKAVMAEEED 913
>sp|Q3J5H6|GLND_RHOS4 [Protein-PII] uridylyltransferase OS=Rhodobacter sphaeroides
(strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158)
GN=glnD PE=3 SV=1
Length = 930
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 94/234 (40%), Gaps = 37/234 (15%)
Query: 31 ACFASSMRSVGVKQ---------SMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEV 81
A FA +R +G + D T +D PG+ S ++ L + NVV A
Sbjct: 714 AVFARMLRGLGETEIRIDLDPDPDRDATRACFALADHPGIFSRLAGALALVGANVVDART 773
Query: 82 WT-HNTRAAALMQVTDEETGGAISDPERLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHT 140
+T + A A+ + D E G+ + RL + ++ LKG + E +D
Sbjct: 774 YTTKDGYATAVFWIQDSE--GSPYEISRLPRLTSMIDKTLKGE----VVAREALKDRDKL 827
Query: 141 ERRLHQMMFADR-DYERTGTDDDSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDT 199
++R Q F ++ G+D Y+++ + ++DRP L++D
Sbjct: 828 KKREAQFRFPTHIAFDNEGSDI--------------------YTIIEVDTRDRPGLLYDL 867
Query: 200 VCTLTDMQYVVFHANIDAEGPEAYQEYFIRHIDGSPVKSDAERERVIQCLKAAI 253
TL + A I G + ++++ + G + +E + + L+ AI
Sbjct: 868 TRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 38.5 bits (88), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAK----- 317
+E+ T DR GLL ++TR N++ + A +AT + V++FYV G + K
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFGLKLHQKNRQET 912
Query: 318 IIDSIRQSI 326
+ +RQ+I
Sbjct: 913 LEKKLRQAI 921
>sp|A4VJR9|GLND_PSEU5 [Protein-PII] uridylyltransferase OS=Pseudomonas stutzeri (strain
A1501) GN=glnD PE=3 SV=1
Length = 900
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 32/133 (24%)
Query: 226 YFIRHIDGSPVKSDAER-ERVIQCLKAA----------IERRVSEGLK------------ 262
Y + DGSP+ ++ ER E + L AA I+RRV LK
Sbjct: 749 YIVLEADGSPIGNNPERIEEIRSGLIAALRNPDDYLTIIQRRVPRQLKHFAFPPQVTIHN 808
Query: 263 --------LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPV 314
LE+ DR GLL+ V ++F + L+V A++AT + + F+V A P+
Sbjct: 809 DTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPL 868
Query: 315 -DAKIIDSIRQSI 326
D ++ ++Q+I
Sbjct: 869 SDPQLCLRLQQAI 881
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 48 HTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPE 107
T +E+ DRPGLL+ V + +V +A++ T R + VTD + +SDP+
Sbjct: 814 QTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADN-QPLSDPQ 872
Query: 108 ---RL--SVIKEL 115
RL ++IKEL
Sbjct: 873 LCLRLQQAIIKEL 885
>sp|Q65SZ8|GLND_MANSM [Protein-PII] uridylyltransferase OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=glnD PE=3 SV=1
Length = 875
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 36/172 (20%)
Query: 172 VNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHAN-IDAEGPEAYQEYFIRH 230
V + N + + V I KDRP L V + + + + A I + A+ + +
Sbjct: 688 VKISNRFSAGGTEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYAFDSFIVTE 747
Query: 231 IDGSPVKSDAERERVIQCLKAAIERRVSEGL----------------------------- 261
+DGS +K D R RV++ KA I S L
Sbjct: 748 LDGSLLKFD--RRRVLE--KAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNTEKTT 803
Query: 262 --KLELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASG 311
++EL T D+ GLL++V+ +F E +L++ A++ T KA + F + A G
Sbjct: 804 HTEMELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKG 855
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 48 HTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPE 107
HT +EL D+ GLL++VS V + L ++ +A++ T +A +T+ + G A+S+ E
Sbjct: 804 HTEMELFTLDKAGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAK-GEALSERE 862
Query: 108 RLSVIKEL 115
R S+ ++L
Sbjct: 863 RQSLSEKL 870
>sp|B0KS97|GLND_PSEPG [Protein-PII] uridylyltransferase OS=Pseudomonas putida (strain
GB-1) GN=glnD PE=3 SV=1
Length = 900
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 28/130 (21%)
Query: 228 IRHIDGSP---VKSDAERERVIQCLKAAIERRVSEGLKLELCTTDRVGLLSNVTRIFREN 284
++H D P + +DA+R I LE+ DR GLL+ + RIF E
Sbjct: 795 LKHFDFPPQVTILNDAQRPVTI----------------LEITAPDRPGLLARLGRIFLEF 838
Query: 285 SLTVTRAEVATKSGKAVNTFYVGGASGYPV-DAKIIDSIRQSIGQTILKVKGNPEDLKSA 343
L++ A++AT + + F++ A P+ D ++ ++++I Q + +G
Sbjct: 839 DLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQG-------- 890
Query: 344 SQDSPTRFLF 353
S SPTR F
Sbjct: 891 SDTSPTRVTF 900
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T +E+T DRPGLL+ + + ++ +A++ T R + +TD + +SDP+
Sbjct: 815 TILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQL 873
Query: 109 LSVIKELLCNVLKGSNKSGLAKTEVS 134
S ++E + L+ S + T V+
Sbjct: 874 CSRLQEAIVQQLQAGQGSDTSPTRVT 899
>sp|B1JBR2|GLND_PSEPW [Protein-PII] uridylyltransferase OS=Pseudomonas putida (strain
W619) GN=glnD PE=3 SV=1
Length = 900
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPV-DAKIIDS 321
LE+ DR GLL+ + RIF E L++ A++AT + + F++ A P+ D ++
Sbjct: 817 LEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 322 IRQSIGQTILKVKGNPEDLKSASQDSPTRFLF 353
++++I Q + AS SPTR F
Sbjct: 877 LQEAIVQQL--------QAGQASDASPTRVTF 900
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T +E+T DRPGLL+ + + ++ +A++ T R + +TD + +SDP+
Sbjct: 815 TILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQL 873
Query: 109 LSVIKELLCNVLKGSNKSGLAKTEVS 134
S ++E + L+ S + T V+
Sbjct: 874 CSRLQEAIVQQLQAGQASDASPTRVT 899
>sp|Q1I624|GLND_PSEE4 [Protein-PII] uridylyltransferase OS=Pseudomonas entomophila
(strain L48) GN=glnD PE=3 SV=1
Length = 900
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 28/130 (21%)
Query: 228 IRHIDGSP---VKSDAERERVIQCLKAAIERRVSEGLKLELCTTDRVGLLSNVTRIFREN 284
++H D P + +DA+R I LE+ DR GLL+ + RIF E
Sbjct: 795 LKHFDFPPQVTILNDAQRPVTI----------------LEITAPDRPGLLARIGRIFLEF 838
Query: 285 SLTVTRAEVATKSGKAVNTFYVGGASGYPV-DAKIIDSIRQSIGQTILKVKGNPEDLKSA 343
+++ A++AT + + F++ A P+ D ++ ++++I Q + A
Sbjct: 839 DISLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSRLQEAIIQQL--------QAGQA 890
Query: 344 SQDSPTRFLF 353
S+ SP+R F
Sbjct: 891 SEASPSRMTF 900
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T +E+T DRPGLL+ + + ++ +A++ T R + +TD + +SDP+
Sbjct: 815 TILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITDADN-QPLSDPQL 873
Query: 109 LSVIKELLCNVLKGSNKS 126
S ++E + L+ S
Sbjct: 874 CSRLQEAIIQQLQAGQAS 891
>sp|B0VR80|GLND_ACIBS [Protein-PII] uridylyltransferase OS=Acinetobacter baumannii
(strain SDF) GN=glnD PE=3 SV=1
Length = 887
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 43 KQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGA 102
K + D I + D+P L + AVL + +V A++ T +T + V + G
Sbjct: 693 KAAQDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGTL 752
Query: 103 ISDPERLSVIKELLCNVLKGSNK-SGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDD 161
++DPER +K L L ++ GL + + + + H ++ T D
Sbjct: 753 LTDPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRH--------------FDIENTVD 798
Query: 162 DSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH-ANIDAEGP 220
+L+E + N +V I++ D P L+ V L MQ + H A I G
Sbjct: 799 VTLNEALQQN------------MVEISTLDHPGLL-ARVGGLFMMQGLDIHSARIATLGE 845
Query: 221 EAYQEYFIRHIDGSPVKSDAERERVIQCLKAAIE 254
A +F+ DG P+ ++ E + + LKAA++
Sbjct: 846 RAEDIFFVTKKDGKPLNNE-EVKLFSEKLKAALD 878
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 33/168 (19%)
Query: 180 KDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRHIDGSPVKS 238
+D + I ++D+P L TV L M V A I A + Y + G+ + +
Sbjct: 696 QDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGT-LLT 754
Query: 239 DAERERVIQ--CLKAA---------IERRVSEGLK--------------------LELCT 267
D ERE ++ +KA ++RR+ L+ +E+ T
Sbjct: 755 DPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRHFDIENTVDVTLNEALQQNMVEIST 814
Query: 268 TDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVD 315
D GLL+ V +F L + A +AT +A + F+V G P++
Sbjct: 815 LDHPGLLARVGGLFMMQGLDIHSARIATLGERAEDIFFVTKKDGKPLN 862
>sp|Q8YES3|GLND_BRUME [Protein-PII] uridylyltransferase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=glnD PE=3 SV=1
Length = 934
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DRPGLLSE++ +++ L ++ SA + T + VTD G IS+ R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 109 LSVIKELLCNVLKGSN 124
IK L +L N
Sbjct: 906 QGNIKRKLLALLGAEN 921
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K +++FYV G+ KI ++
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNAT 904
Query: 323 RQ-SIGQTILKVKG 335
RQ +I + +L + G
Sbjct: 905 RQGNIKRKLLALLG 918
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T I + D P LLS ++ N+V A+++T + RA + ++ E D E
Sbjct: 736 TEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRALDTILISREFD---TDDDE 792
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R + + + G +V +DV + L M+ +RT + K
Sbjct: 793 R------------RRAERVG----KVIEDVLSGKAHLPDML-----AKRTKPKKAARAFK 831
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N ++V+ + DRP L+ + ++D+ + A+I G + ++
Sbjct: 832 VEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFY 891
Query: 228 IRHIDGSPVKSDAERE 243
+ + G + S+A R+
Sbjct: 892 VTDLVGHKI-SNATRQ 906
>sp|Q57FN0|GLND_BRUAB [Protein-PII] uridylyltransferase OS=Brucella abortus biovar 1
(strain 9-941) GN=glnD PE=3 SV=1
Length = 934
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DRPGLLSE++ +++ L ++ SA + T + VTD G IS+ R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 109 LSVIKELLCNVLKGSN 124
IK L +L N
Sbjct: 906 QGNIKRKLLALLGAEN 921
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K +++FYV G+ KI ++
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNAT 904
Query: 323 RQ-SIGQTILKVKG 335
RQ +I + +L + G
Sbjct: 905 RQGNIKRKLLALLG 918
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T I + D P LLS ++ N+V A+++T + RA + ++ E D E
Sbjct: 736 TEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRALDTILISREFD---TDDDE 792
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R + + + G +V +DV + L M+ +RT + K
Sbjct: 793 R------------RRAERVG----KVIEDVLSGKAHLPDML-----AKRTKPKKAARAFK 831
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N ++V+ + DRP L+ + ++D+ + A+I G + ++
Sbjct: 832 VEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFY 891
Query: 228 IRHIDGSPVKSDAERE 243
+ + G + S+A R+
Sbjct: 892 VTDLVGHKI-SNATRQ 906
>sp|Q2YNZ1|GLND_BRUA2 [Protein-PII] uridylyltransferase OS=Brucella abortus (strain 2308)
GN=glnD PE=3 SV=1
Length = 934
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DRPGLLSE++ +++ L ++ SA + T + VTD G IS+ R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 109 LSVIKELLCNVLKGSN 124
IK L +L N
Sbjct: 906 QGNIKRKLLALLGAEN 921
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K +++FYV G+ KI ++
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNAT 904
Query: 323 RQ-SIGQTILKVKG 335
RQ +I + +L + G
Sbjct: 905 RQGNIKRKLLALLG 918
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T I + D P LLS ++ N+V A+++T + RA + ++ E D E
Sbjct: 736 TEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRALDTILISREFD---TDDDE 792
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R + + + G +V +DV + L M+ +RT + K
Sbjct: 793 R------------RRAERVG----KVIEDVLSGKAHLPDML-----AKRTKPKKAARAFK 831
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N ++V+ + DRP L+ + ++D+ + A+I G + ++
Sbjct: 832 VEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFY 891
Query: 228 IRHIDGSPVKSDAERE 243
+ + G + S+A R+
Sbjct: 892 VTDLVGHKI-SNATRQ 906
>sp|B2S8D8|GLND_BRUA1 [Protein-PII] uridylyltransferase OS=Brucella abortus (strain S19)
GN=glnD PE=3 SV=1
Length = 934
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DRPGLLSE++ +++ L ++ SA + T + VTD G IS+ R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 109 LSVIKELLCNVLKGSN 124
IK L +L N
Sbjct: 906 QGNIKRKLLALLGAEN 921
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K +++FYV G+ KI ++
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNAT 904
Query: 323 RQ-SIGQTILKVKG 335
RQ +I + +L + G
Sbjct: 905 RQGNIKRKLLALLG 918
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T I + D P LLS ++ N+V A+++T + RA + ++ E D E
Sbjct: 736 TEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRALDTILISREFD---TDDDE 792
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R + + + G +V +DV + L M+ +RT + K
Sbjct: 793 R------------RRAERVG----KVIEDVLSGKAHLPDML-----AKRTKPKKAARAFK 831
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N ++V+ + DRP L+ + ++D+ + A+I G + ++
Sbjct: 832 VEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFY 891
Query: 228 IRHIDGSPVKSDAERE 243
+ + G + S+A R+
Sbjct: 892 VTDLVGHKI-SNATRQ 906
>sp|B0VC63|GLND_ACIBY [Protein-PII] uridylyltransferase OS=Acinetobacter baumannii
(strain AYE) GN=glnD PE=3 SV=1
Length = 887
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 43 KQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGA 102
K + D I + D+P L + AVL + +V A++ T +T + V + G
Sbjct: 693 KAAQDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGTL 752
Query: 103 ISDPERLSVIKELLCNVLKGSNK-SGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDD 161
++DPER +K L L ++ GL + + + + H ++ T D
Sbjct: 753 LTDPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRH--------------FDIENTVD 798
Query: 162 DSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH-ANIDAEGP 220
+L+E + N +V I++ D P L+ V L MQ + H A I G
Sbjct: 799 VTLNEALQQN------------MVEISTLDHPGLL-ARVGGLFMMQGLDIHSARIATLGE 845
Query: 221 EAYQEYFIRHIDGSPVKSDAERERVIQCLKAAIE 254
A +F+ DG P+ ++ E + + LKAA++
Sbjct: 846 RAEDIFFVTKKDGKPLNNE-EVKLFSEKLKAALD 878
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 33/168 (19%)
Query: 180 KDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRHIDGSPVKS 238
+D + I ++D+P L TV L M V A I A + Y + G+ + +
Sbjct: 696 QDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGT-LLT 754
Query: 239 DAERERVIQ--CLKAA---------IERRVSEGLK--------------------LELCT 267
D ERE ++ +KA ++RR+ L+ +E+ T
Sbjct: 755 DPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRHFDIENTVDVTLNEALQQNMVEIST 814
Query: 268 TDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVD 315
D GLL+ V +F L + A +AT +A + F+V G P++
Sbjct: 815 LDHPGLLARVGGLFMMQGLDIHSARIATLGERAEDIFFVTKKDGKPLN 862
>sp|B7I420|GLND_ACIB5 [Protein-PII] uridylyltransferase OS=Acinetobacter baumannii
(strain AB0057) GN=glnD PE=3 SV=1
Length = 887
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 43 KQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGA 102
K + D I + D+P L + AVL + +V A++ T +T + V + G
Sbjct: 693 KAAQDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGTL 752
Query: 103 ISDPERLSVIKELLCNVLKGSNK-SGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDD 161
++DPER +K L L ++ GL + + + + H ++ T D
Sbjct: 753 LTDPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRH--------------FDIENTVD 798
Query: 162 DSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH-ANIDAEGP 220
+L+E + N +V I++ D P L+ V L MQ + H A I G
Sbjct: 799 VTLNEALQQN------------MVEISTLDHPGLL-ARVGGLFMMQGLDIHSARIATLGE 845
Query: 221 EAYQEYFIRHIDGSPVKSDAERERVIQCLKAAIE 254
A +F+ DG P+ ++ E + + LKAA++
Sbjct: 846 RAEDIFFVTKKDGKPLNNE-EVKLFSEKLKAALD 878
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 33/168 (19%)
Query: 180 KDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRHIDGSPVKS 238
+D + I ++D+P L TV L M V A I A + Y + G+ + +
Sbjct: 696 QDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGT-LLT 754
Query: 239 DAERERVIQ--CLKAA---------IERRVSEGLK--------------------LELCT 267
D ERE ++ +KA ++RR+ L+ +E+ T
Sbjct: 755 DPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRHFDIENTVDVTLNEALQQNMVEIST 814
Query: 268 TDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVD 315
D GLL+ V +F L + A +AT +A + F+V G P++
Sbjct: 815 LDHPGLLARVGGLFMMQGLDIHSARIATLGERAEDIFFVTKKDGKPLN 862
>sp|B7H3W7|GLND_ACIB3 [Protein-PII] uridylyltransferase OS=Acinetobacter baumannii
(strain AB307-0294) GN=glnD PE=3 SV=1
Length = 887
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 43 KQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGA 102
K + D I + D+P L + AVL + +V A++ T +T + V + G
Sbjct: 693 KAAQDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGTL 752
Query: 103 ISDPERLSVIKELLCNVLKGSNK-SGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDD 161
++DPER +K L L ++ GL + + + + H ++ T D
Sbjct: 753 LTDPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRH--------------FDIENTVD 798
Query: 162 DSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH-ANIDAEGP 220
+L+E + N +V I++ D P L+ V L MQ + H A I G
Sbjct: 799 VTLNEALQQN------------MVEISTLDHPGLL-ARVGGLFMMQGLDIHSARIATLGE 845
Query: 221 EAYQEYFIRHIDGSPVKSDAERERVIQCLKAAIE 254
A +F+ DG P+ ++ E + + LKAA++
Sbjct: 846 RAEDIFFVTKKDGKPLNNE-EVKLFSEKLKAALD 878
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 33/168 (19%)
Query: 180 KDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRHIDGSPVKS 238
+D + I ++D+P L TV L M V A I A + Y + G+ + +
Sbjct: 696 QDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGT-LLT 754
Query: 239 DAERERVIQ--CLKAA---------IERRVSEGLK--------------------LELCT 267
D ERE ++ +KA ++RR+ L+ +E+ T
Sbjct: 755 DPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRHFDIENTVDVTLNEALQQNMVEIST 814
Query: 268 TDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVD 315
D GLL+ V +F L + A +AT +A + F+V G P++
Sbjct: 815 LDHPGLLARVGGLFMMQGLDIHSARIATLGERAEDIFFVTKKDGKPLN 862
>sp|Q8G312|GLND_BRUSU [Protein-PII] uridylyltransferase OS=Brucella suis biovar 1 (strain
1330) GN=glnD PE=3 SV=1
Length = 934
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DRPGLLSE++ +++ L ++ SA + T + VTD G IS+ R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 109 LSVIKELLCNVLKGSN 124
IK L +L N
Sbjct: 906 QGNIKRKLLALLGAEN 921
Score = 36.2 bits (82), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T I + D P LLS ++ N+V A+++T N RA + ++ E D E
Sbjct: 736 TEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSNGRALDTILISREFD---TDDDE 792
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R + + + G +V +DV + L M+ +RT + K
Sbjct: 793 R------------RRAERVG----KVIEDVLSGKAHLPDML-----AKRTKPKKAARAFK 831
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N ++V+ + DRP L+ + ++D+ + A+I G + ++
Sbjct: 832 VEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFY 891
Query: 228 IRHIDGSPVKSDAERE 243
+ + G + S+A R+
Sbjct: 892 VTDLVGHKI-SNATRQ 906
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K +++FYV G+ KI ++
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNAT 904
Query: 323 RQ-SIGQTILKVKG 335
RQ +I + +L + G
Sbjct: 905 RQGNIKRKLLALLG 918
>sp|B0CIQ3|GLND_BRUSI [Protein-PII] uridylyltransferase OS=Brucella suis (strain ATCC
23445 / NCTC 10510) GN=glnD PE=3 SV=1
Length = 934
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DRPGLLSE++ +++ L ++ SA + T + VTD G IS+ R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 109 LSVIKELLCNVLKGSN 124
IK L +L N
Sbjct: 906 QGNIKRKLLALLGAEN 921
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K +++FYV G+ KI ++
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNAT 904
Query: 323 RQ-SIGQTILKVKG 335
RQ +I + +L + G
Sbjct: 905 RQGNIKRKLLALLG 918
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T I + D P LLS ++ N+V A+++T + RA + ++ E D E
Sbjct: 736 TEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRALDTILISREFD---TDDDE 792
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R + + + G +V +DV + L M+ +RT + K
Sbjct: 793 R------------RRAERVG----KVIEDVLSGKAHLPDML-----AKRTKPKKAARAFK 831
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N ++V+ + DRP L+ + ++D+ + A+I G + ++
Sbjct: 832 VEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFY 891
Query: 228 IRHIDGSPVKSDAERE 243
+ + G + S+A R+
Sbjct: 892 VTDLVGHKI-SNATRQ 906
>sp|A5VN81|GLND_BRUO2 [Protein-PII] uridylyltransferase OS=Brucella ovis (strain ATCC
25840 / 63/290 / NCTC 10512) GN=glnD PE=3 SV=1
Length = 934
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DRPGLLSE++ +++ L ++ SA + T + VTD G IS+ R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 109 LSVIKELLCNVLKGSN 124
IK L +L N
Sbjct: 906 QGNIKRKLLALLGAEN 921
Score = 35.8 bits (81), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K +++FYV G+ KI ++
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNAT 904
Query: 323 RQ-SIGQTILKVKG 335
RQ +I + +L + G
Sbjct: 905 RQGNIKRKLLALLG 918
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T I + D P LLS ++ N+V A+++T + RA + ++ E D E
Sbjct: 736 TEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRALDTILISREFD---TDDDE 792
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R + + + G +V +DV + L M+ +RT + K
Sbjct: 793 R------------RQAERVG----KVIEDVLSGKAHLPDML-----AKRTKPKKAARAFK 831
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N ++V+ + DRP L+ + ++D+ + A+I G + ++
Sbjct: 832 VEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFY 891
Query: 228 IRHIDGSPVKSDAERE 243
+ + G + S+A R+
Sbjct: 892 VTDLVGHKI-SNATRQ 906
>sp|B2HYT7|GLND_ACIBC [Protein-PII] uridylyltransferase OS=Acinetobacter baumannii
(strain ACICU) GN=glnD PE=3 SV=1
Length = 887
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 30/214 (14%)
Query: 43 KQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGA 102
K + D I + D+P L + AVL + +V A++ T +T + V + G
Sbjct: 693 KAAQDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGTL 752
Query: 103 ISDPERLSVIKELLCNVLKGSNK-SGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDD 161
++DPER +K L L ++ GL + + + + H ++ T D
Sbjct: 753 LTDPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRH--------------FDIENTVD 798
Query: 162 DSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH-ANIDAEGP 220
+L+E + N +V I++ D P L+ V L MQ + H A I G
Sbjct: 799 VTLNEALQQN------------MVEISTLDHPGLL-ARVGGLFMMQGLDIHSARIATLGE 845
Query: 221 EAYQEYFIRHIDGSPVKSDAERERVIQCLKAAIE 254
A +F+ DG P+ ++ E + + LKAA++
Sbjct: 846 RAEDIFFVTKKDGKPLNNE-EVKLFSEKLKAALD 878
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 33/168 (19%)
Query: 180 KDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRHIDGSPVKS 238
+D + I ++D+P L TV L M V A I A + Y + G+ + +
Sbjct: 696 QDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGT-LLT 754
Query: 239 DAERERVIQ--CLKAA---------IERRVSEGLK--------------------LELCT 267
D ERE ++ +KA ++RR+ L+ +E+ T
Sbjct: 755 DPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRHFDIENTVDVTLNEALQQNMVEIST 814
Query: 268 TDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVD 315
D GLL+ V +F L + A +AT +A + F+V G P++
Sbjct: 815 LDHPGLLARVGGLFMMQGLDIHSARIATLGERAEDIFFVTKKDGKPLN 862
>sp|C0RGK0|GLND_BRUMB [Protein-PII] uridylyltransferase OS=Brucella melitensis biotype 2
(strain ATCC 23457) GN=glnD PE=3 SV=1
Length = 934
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DRPGLLSE++ +++ L ++ SA + T + VTD G IS+ R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 109 LSVIKELLCNVLKGSN 124
IK L +L N
Sbjct: 906 QGNIKRKLLALLGAEN 921
Score = 35.8 bits (81), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS +T + + SL + A + T K +++FYV G+ KI ++
Sbjct: 849 IEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGH----KISNAT 904
Query: 323 RQ-SIGQTILKVKG 335
RQ +I + +L + G
Sbjct: 905 RQGNIKRKLLALLG 918
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWT-HNTRAAALMQVTDEETGGAISDPE 107
T I + D P LLS ++ N+V A+++T + RA + ++ E D E
Sbjct: 736 TEITVLAPDHPRLLSVITGACAAAGGNIVDAQIFTTSDGRALDTILISREFD---TDDDE 792
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R + + + G +V +DV + L M+ +RT + K
Sbjct: 793 R------------RRAERVG----KVIEDVLSGKAHLPDML-----AKRTKPKKAARAFK 831
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N ++V+ + DRP L+ + ++D+ + A+I G + ++
Sbjct: 832 VEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFY 891
Query: 228 IRHIDGSPVKSDAERE 243
+ + G + S+A R+
Sbjct: 892 VTDLVGHKI-SNATRQ 906
>sp|Q6FAM5|GLND_ACIAD [Protein-PII] uridylyltransferase OS=Acinetobacter sp. (strain
ADP1) GN=glnD PE=3 SV=1
Length = 888
Score = 45.1 bits (105), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 31/200 (15%)
Query: 43 KQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAAL-MQVTDEETGG 101
+ + D I + D+P L + AVL + +V A + T T+A +L V + G
Sbjct: 693 QSAQDAVQIFIYTQDKPNLFATTVAVLDRMNLDVQDARIIT-ATKAFSLDTYVVLDRFGT 751
Query: 102 AISDPERLSVIKELLCNVLKGSNK-SGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTD 160
++DPER +KE L L S+K GL + + + + H ++ T
Sbjct: 752 LLTDPEREHTVKEALIKALSQSDKYPGLMQRRIPRQLRH--------------FDIENTV 797
Query: 161 DDSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH-ANIDAEG 219
D +L+ + N +V I++ D+P L+ V L MQ + H A I G
Sbjct: 798 DITLNPVLQQN------------MVEISTLDQPGLL-ARVGGLFMMQGLDIHSAKIATLG 844
Query: 220 PEAYQEYFIRHIDGSPVKSD 239
A +F+ DG P+ +D
Sbjct: 845 ERAEDIFFVTKKDGQPMTTD 864
Score = 37.4 bits (85), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 33/167 (19%)
Query: 180 KDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRHIDGSPVKS 238
+D + I ++D+P L TV L M V A I A + Y + G+ + +
Sbjct: 696 QDAVQIFIYTQDKPNLFATTVAVLDRMNLDVQDARIITATKAFSLDTYVVLDRFGT-LLT 754
Query: 239 DAERERVIQ--CLKAA---------IERRVSEGLK--------------------LELCT 267
D ERE ++ +KA ++RR+ L+ +E+ T
Sbjct: 755 DPEREHTVKEALIKALSQSDKYPGLMQRRIPRQLRHFDIENTVDITLNPVLQQNMVEIST 814
Query: 268 TDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPV 314
D+ GLL+ V +F L + A++AT +A + F+V G P+
Sbjct: 815 LDQPGLLARVGGLFMMQGLDIHSAKIATLGERAEDIFFVTKKDGQPM 861
>sp|Q9AC53|GLND_CAUCR [Protein-PII] uridylyltransferase OS=Caulobacter crescentus (strain
ATCC 19089 / CB15) GN=glnD PE=3 SV=1
Length = 940
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 27/197 (13%)
Query: 42 VKQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGG 101
V+ + + + DR GL ++++ ++ L NVV A V+T A + + TG
Sbjct: 729 VRPGSNAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGA 788
Query: 102 AIS--DPERLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGT 159
+P L + + L KG D E R R E+T
Sbjct: 789 PFGCENPRALRRLADALEAAGKG-------------DALAVEPR--------RGSEQTRA 827
Query: 160 DDDSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEG 219
++ P+V + N D +VV + +DRP L+ TL D + A+ID G
Sbjct: 828 AAFAIA----PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYG 883
Query: 220 PEAYQEYFIRHIDGSPV 236
A ++++ +G V
Sbjct: 884 ERAVDAFYVQTTEGGKV 900
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 45 SMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAIS 104
S D T +E +G DRPGLL ++ L ++ SA + + RA V E GG ++
Sbjct: 843 SNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTE-GGKVT 901
Query: 105 D 105
D
Sbjct: 902 D 902
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 33/155 (21%)
Query: 185 VTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRHIDGSPVKSDAER- 242
V I +KDR L D ++ + V A + + +A ++++ + G+P + R
Sbjct: 738 VVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRA 797
Query: 243 -ERVIQCLKAAIE--------RRVSEGLK----------------------LELCTTDRV 271
R+ L+AA + RR SE + +E DR
Sbjct: 798 LRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEASGRDRP 857
Query: 272 GLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYV 306
GLL + + +++L++ A + +AV+ FYV
Sbjct: 858 GLLHALAKTLADSALSIQSAHIDGYGERAVDAFYV 892
>sp|B8GWX0|GLND_CAUCN [Protein-PII] uridylyltransferase OS=Caulobacter crescentus (strain
NA1000 / CB15N) GN=glnD PE=3 SV=1
Length = 940
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 78/197 (39%), Gaps = 27/197 (13%)
Query: 42 VKQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGG 101
V+ + + + DR GL ++++ ++ L NVV A V+T A + + TG
Sbjct: 729 VRPGSNAAEVVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGA 788
Query: 102 AIS--DPERLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGT 159
+P L + + L KG D E R R E+T
Sbjct: 789 PFGCENPRALRRLADALEAAGKG-------------DALAVEPR--------RGSEQTRA 827
Query: 160 DDDSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEG 219
++ P+V + N D +VV + +DRP L+ TL D + A+ID G
Sbjct: 828 AAFAIA----PSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYG 883
Query: 220 PEAYQEYFIRHIDGSPV 236
A ++++ +G V
Sbjct: 884 ERAVDAFYVQTTEGGKV 900
Score = 35.4 bits (80), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 45 SMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAIS 104
S D T +E +G DRPGLL ++ L ++ SA + + RA V E GG ++
Sbjct: 843 SNDATVVEASGRDRPGLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTE-GGKVT 901
Query: 105 D 105
D
Sbjct: 902 D 902
Score = 32.0 bits (71), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 63/155 (40%), Gaps = 33/155 (21%)
Query: 185 VTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRHIDGSPVKSDAER- 242
V I +KDR L D ++ + V A + + +A ++++ + G+P + R
Sbjct: 738 VVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRA 797
Query: 243 -ERVIQCLKAAIE--------RRVSEGLK----------------------LELCTTDRV 271
R+ L+AA + RR SE + +E DR
Sbjct: 798 LRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEASGRDRP 857
Query: 272 GLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYV 306
GLL + + +++L++ A + +AV+ FYV
Sbjct: 858 GLLHALAKTLADSALSIQSAHIDGYGERAVDAFYV 892
>sp|A3M4Q8|GLND_ACIBT [Protein-PII] uridylyltransferase OS=Acinetobacter baumannii
(strain ATCC 17978 / NCDC KC 755) GN=glnD PE=3 SV=2
Length = 887
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 43 KQSMDHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGA 102
K + D I + D+P L + AVL + +V A++ T +T + V + G
Sbjct: 693 KAAQDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGTL 752
Query: 103 ISDPERLSVIKELLCNVLKGSNK-SGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDD 161
++DPER +K L L ++ GL + + + + H ++ T D
Sbjct: 753 LTDPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRH--------------FDIENTVD 798
Query: 162 DSLDEKQRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFH-ANIDAEGP 220
+L+E + N +V I++ D P L+ V L MQ + H A I G
Sbjct: 799 VTLNEALQQN------------MVEISTLDHPGLL-ARVGGLFMMQGLDIHSARIATLGE 845
Query: 221 EAYQEYFIRHIDGSPVKSDAERERVIQCLKAAIE 254
A +F+ DG P+ + E + + LKAA++
Sbjct: 846 RAEDIFFVTKKDGKPLNHE-EVKLFSEKLKAALD 878
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 33/168 (19%)
Query: 180 KDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRHIDGSPVKS 238
+D + I ++D+P L TV L M V A I A + Y + G+ + +
Sbjct: 696 QDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGT-LLT 754
Query: 239 DAERERVIQ--CLKAA---------IERRVSEGLK--------------------LELCT 267
D ERE ++ +KA ++RR+ L+ +E+ T
Sbjct: 755 DPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRHFDIENTVDVTLNEALQQNMVEIST 814
Query: 268 TDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVD 315
D GLL+ V +F L + A +AT +A + F+V G P++
Sbjct: 815 LDHPGLLARVGGLFMMQGLDIHSARIATLGERAEDIFFVTKKDGKPLN 862
>sp|Q0J709|UP12_ORYSJ Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
sativa subsp. japonica GN=Os08g0242700 PE=2 SV=2
Length = 283
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 33/191 (17%)
Query: 47 DHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDP 106
D T +E+T DR G L + L +L NVV A V +T + +T TG I +P
Sbjct: 88 DATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAITKLSTGRKIGEP 147
Query: 107 E-----RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDD 161
E RL++I ++ + S++ L T + T D D
Sbjct: 148 ELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTE---------LVDVDI------- 191
Query: 162 DSLDEKQRPNVNVVNCYD--KDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEG 219
++ YD D S++ + + DRP L+ D V + D+ V D EG
Sbjct: 192 ----------ATHIDIYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEG 241
Query: 220 PEAYQEYFIRH 230
A ++ + +
Sbjct: 242 LLAKAKFHVSY 252
>sp|P83643|UP12_ORYSI Unknown protein DS12 from 2D-PAGE of leaf, chloroplastic OS=Oryza
sativa subsp. indica GN=OsI_027381 PE=1 SV=2
Length = 283
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 76/191 (39%), Gaps = 33/191 (17%)
Query: 47 DHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDP 106
D T +E+T DR G L + L +L NVV A V +T + +T TG I +P
Sbjct: 88 DATIVEITLGDRLGDLLDTMNALKNLGLNVVKASVCLDSTGKHIKLAITKLSTGRKIGEP 147
Query: 107 E-----RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDD 161
E RL++I ++ + S++ L T + T D D
Sbjct: 148 ELLEAVRLTIINNMIQYHPEASSQLALGATFGPEPPTE---------LVDVDI------- 191
Query: 162 DSLDEKQRPNVNVVNCYD--KDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEG 219
++ YD D S++ + + DRP L+ D V + D+ V D EG
Sbjct: 192 ----------ATHIDIYDDGPDRSLLVVETADRPGLLVDLVKIIDDINITVQSGEFDTEG 241
Query: 220 PEAYQEYFIRH 230
A ++ + +
Sbjct: 242 LLAKAKFHVSY 252
>sp|Q88MI2|GLND_PSEPK [Protein-PII] uridylyltransferase OS=Pseudomonas putida (strain
KT2440) GN=glnD PE=3 SV=1
Length = 900
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 228 IRHIDGSP---VKSDAERERVIQCLKAAIERRVSEGLKLELCTTDRVGLLSNVTRIFREN 284
++H D P + +DA+R I LE+ DR GLL+ + RIF E
Sbjct: 795 LKHFDFPPQVTILNDAQRPVTI----------------LEITAPDRPGLLARLGRIFLEF 838
Query: 285 SLTVTRAEVATKSGKAVNTFYVGGASGYPV-DAKIIDSIRQSIGQTILKVKGN 336
L++ A++AT + + F++ A P+ D ++ ++++I Q + +G+
Sbjct: 839 DLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQGS 891
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T +E+T DRPGLL+ + + ++ +A++ T R + +TD + +SDP+
Sbjct: 815 TILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQL 873
Query: 109 LSVIKELLCNVLKGSNKSGLAKTEVS 134
S ++E + L+ S ++T V+
Sbjct: 874 CSRLQEAIVQQLQAGQGSDTSQTRVT 899
>sp|A5W852|GLND_PSEP1 [Protein-PII] uridylyltransferase OS=Pseudomonas putida (strain F1
/ ATCC 700007) GN=glnD PE=3 SV=1
Length = 900
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 20/113 (17%)
Query: 228 IRHIDGSP---VKSDAERERVIQCLKAAIERRVSEGLKLELCTTDRVGLLSNVTRIFREN 284
++H D P + +DA+R I LE+ DR GLL+ + RIF E
Sbjct: 795 LKHFDFPPQVTILNDAQRPVTI----------------LEITAPDRPGLLARLGRIFLEF 838
Query: 285 SLTVTRAEVATKSGKAVNTFYVGGASGYPV-DAKIIDSIRQSIGQTILKVKGN 336
L++ A++AT + + F++ A P+ D ++ ++++I Q + +G+
Sbjct: 839 DLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQGS 891
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T +E+T DRPGLL+ + + ++ +A++ T R + +TD + +SDP+
Sbjct: 815 TILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADN-QPLSDPQL 873
Query: 109 LSVIKELLCNVLKGSNKSGLAKTEVS 134
S ++E + L+ S ++T V+
Sbjct: 874 CSRLQEAIVQQLQAGQGSDTSQTRVT 899
>sp|Q485H4|GLND_COLP3 [Protein-PII] uridylyltransferase OS=Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) GN=glnD PE=3 SV=1
Length = 878
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 20 LDYIRKCLGPEACFASSMRSVGVK--------QSMDHTAIELTGSDRPGLLSEVSAVLTH 71
L + C PE A M+ V + + T IE+ DRPGLLS +S V
Sbjct: 771 LQQVNICELPEPKLARHMKKFKVPLRVNFIKIHAKNRTMIEIIALDRPGLLSNISQVFLE 830
Query: 72 LKCNVVSAEVWTHNTRAAALMQVTDEE 98
+ N+ SA++ T +A + ++ EE
Sbjct: 831 ARVNIHSAKITTFGEKADDVFTISTEE 857
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVG 307
+E+ DR GLLSN++++F E + + A++ T KA + F +
Sbjct: 810 IEIIALDRPGLLSNISQVFLEARVNIHSAKITTFGEKADDVFTIS 854
>sp|A5UBF9|GLND_HAEIE [Protein-PII] uridylyltransferase OS=Haemophilus influenzae (strain
PittEE) GN=glnD PE=3 SV=1
Length = 863
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 172 VNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRH 230
V + N + + V I +D+P L V T+ ++ + A I + + + I
Sbjct: 676 VKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITE 735
Query: 231 IDGSPVKSDAERERVIQCLKAAIE------------------------RRVSEGLK---- 262
++G V+ D RE + Q L A++ R + E K
Sbjct: 736 LNGELVEFDRRRE-LEQALTLALQSEKLSALSITPNRQLQHFTVQTDVRFLHENKKEHTE 794
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+EL D+ GLL+ V++IF E +L + A++ T KA + F + G +D++ + +
Sbjct: 795 MELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREIL 854
Query: 323 RQSIGQTI 330
R + + I
Sbjct: 855 RNVLYRNI 862
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 47 DHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDP 106
+HT +EL D+ GLL++VS + + L N+++A++ T +A +T+ + G A+
Sbjct: 791 EHTEMELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTN-QFGQALDSQ 849
Query: 107 ERLSVIKELLCNVL 120
+R E+L NVL
Sbjct: 850 QR-----EILRNVL 858
>sp|Q4QJM6|GLND_HAEI8 [Protein-PII] uridylyltransferase OS=Haemophilus influenzae (strain
86-028NP) GN=glnD PE=3 SV=1
Length = 863
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 47 DHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDP 106
+HT +EL D+ GLL++VS + T L N+++A++ T +A +T+ + G A+
Sbjct: 791 EHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTN-QFGQALDSQ 849
Query: 107 ERLSVIKELLCNVL 120
+R E+L NVL
Sbjct: 850 QR-----EILRNVL 858
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 77/187 (41%), Gaps = 28/187 (14%)
Query: 172 VNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRH 230
V + N + + V I +D+P L V T+ ++ + A I + + + I
Sbjct: 676 VKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITE 735
Query: 231 IDGSPVKSDAERE----------------------RVIQCLKAAIERRV-----SEGLKL 263
++G V+ D RE R +Q + R E ++
Sbjct: 736 LNGELVEFDRRRELEQALTLALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTQM 795
Query: 264 ELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSIR 323
EL D+ GLL+ V++IF E +L + A++ T KA + F + G +D++ + +R
Sbjct: 796 ELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILR 855
Query: 324 QSIGQTI 330
+ + I
Sbjct: 856 NVLYRNI 862
>sp|Q48F57|GLND_PSE14 [Protein-PII] uridylyltransferase OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=glnD PE=3 SV=1
Length = 898
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPV-DAKIIDS 321
LEL DR GLL+ + +IF E L++ A++AT + + F++ A+ +P+ D ++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 322 IRQSIGQTILKVKGNP-EDLK 341
++ +I + L V P DL+
Sbjct: 876 LQDAIVKQ-LSVNSEPGHDLR 895
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T +EL DRPGLL+ + + ++ +A++ T R + +TD +SDP+
Sbjct: 814 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNHPLSDPQL 872
Query: 109 LSVIKELLCNVLKGSNKSG 127
S +++ + L +++ G
Sbjct: 873 CSQLQDAIVKQLSVNSEPG 891
>sp|P56884|GLND_RHIME [Protein-PII] uridylyltransferase OS=Rhizobium meliloti (strain
1021) GN=glnD PE=3 SV=1
Length = 949
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DR GLLSEV+AVL+ L ++ SA + T + VTD G I+ R
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENR 902
Query: 109 LSVIKELLCNVLKG 122
I L VL G
Sbjct: 903 QMNIAARLKAVLAG 916
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 85/212 (40%), Gaps = 23/212 (10%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T I + D P LL+ ++ N+V A++ T + A + + E A + R
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 109 LSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEKQ 168
+ I +L+ +VL G + EV T ++R R + T
Sbjct: 793 AASIGKLIEDVLSGRKRL----PEVIASRTRVKKR-------SRAFTVT----------- 830
Query: 169 RPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYFI 228
P V + N ++V+ + DR L+ + L+D+ + A+I G + +++
Sbjct: 831 -PEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 889
Query: 229 RHIDGSPVKSDAERERVIQCLKAAIERRVSEG 260
+ GS + S+ + + LKA + V E
Sbjct: 890 TDLVGSKITSENRQMNIAARLKAVLAGEVDEA 921
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYV 306
+E+ DR GLLS VT + + SL + A + T K ++TFYV
Sbjct: 846 IEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 889
>sp|A6U5G1|GLND_SINMW [Protein-PII] uridylyltransferase OS=Sinorhizobium medicae (strain
WSM419) GN=glnD PE=3 SV=1
Length = 949
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ G DR GLLSEV+AVL+ L ++ SA + T + VTD G I+ R
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENR 902
Query: 109 LSVIKELLCNVLKG 122
I L VL G
Sbjct: 903 QMNIAARLKAVLAG 916
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 81/212 (38%), Gaps = 23/212 (10%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T I + D P LL+ ++ N+V A++ T + A + + E A + R
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 109 LSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEKQ 168
+ I +L+ +VL G K D RT + S
Sbjct: 793 AASIGKLIEDVLSGRKK-----------------------LPDVIASRTRSKKRSRAFTV 829
Query: 169 RPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYFI 228
P V + N ++V+ + DR L+ + L+D+ + A+I G + +++
Sbjct: 830 TPEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYV 889
Query: 229 RHIDGSPVKSDAERERVIQCLKAAIERRVSEG 260
+ GS + S+ + + LKA + V E
Sbjct: 890 TDLVGSKITSENRQMNIAARLKAVLAGEVDEA 921
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPVDAKIIDSI 322
+E+ DR GLLS VT + + SL + A + T K ++TFYV G +KI
Sbjct: 846 IEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVG----SKITSEN 901
Query: 323 RQ 324
RQ
Sbjct: 902 RQ 903
>sp|Q53245|GLND_RHITR [Protein-PII] uridylyltransferase OS=Rhizobium tropici GN=glnD PE=3
SV=2
Length = 948
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T IE+ DRPGLLSE++AVL+ L ++ SA + T + V D G IS+ R
Sbjct: 839 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKISNENR 897
Query: 109 LSVIKELLCNVLKG 122
+ I L V+ G
Sbjct: 898 RAYITARLKAVMAG 911
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 39/84 (46%)
Query: 170 PNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYFIR 229
P+V + N ++V+ + DRP L+ + L+D+ + A I G + +++
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Query: 230 HIDGSPVKSDAERERVIQCLKAAI 253
+ G + ++ R + LKA +
Sbjct: 886 DLVGQKISNENRRAYITARLKAVM 909
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPV 314
+E+ DR GLLS +T + + SL + A + T K ++TFYV G +
Sbjct: 841 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 892
>sp|P43919|GLND_HAEIN [Protein-PII] uridylyltransferase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=glnD PE=3 SV=1
Length = 863
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 47 DHTAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDP 106
+HT +EL D+ GLL++VS + T L N+++A++ T +A +T+ + G A++
Sbjct: 791 EHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTN-QFGQALARE 849
Query: 107 ER 108
ER
Sbjct: 850 ER 851
Score = 39.7 bits (91), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 30/169 (17%)
Query: 172 VNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANI-DAEGPEAYQEYFIRH 230
V + N + + V I +D+P L V T+ ++ + A I + + + I
Sbjct: 676 VKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITE 735
Query: 231 IDGSPVKSDAERERVIQCLKAAIE------------------------RRVSEGLK---- 262
++G V+ D RE + Q L A++ R + E K
Sbjct: 736 LNGELVEFDRRRE-LEQALTVALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTE 794
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASG 311
+EL D+ GLL+ V++IF E +L + A++ T KA + F + G
Sbjct: 795 MELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFG 843
>sp|Q886P5|GLND_PSESM [Protein-PII] uridylyltransferase OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=glnD PE=3 SV=1
Length = 898
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPV-DAKIIDS 321
LEL DR GLL+ + +IF E L++ A++AT + + F++ A+ P+ D ++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 322 IRQSIGQTILKVKGNP 337
++++I + L V P
Sbjct: 876 LQEAIVKQ-LSVNSEP 890
Score = 39.3 bits (90), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPER 108
T +EL DRPGLL+ + + ++ +A++ T R + +TD +SDP+
Sbjct: 814 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNQPLSDPQL 872
Query: 109 LSVIKELLCNVLKGSNKSG 127
S ++E + L +++ G
Sbjct: 873 CSQLQEAIVKQLSVNSEPG 891
>sp|Q4ZWT0|GLND_PSEU2 [Protein-PII] uridylyltransferase OS=Pseudomonas syringae pv.
syringae (strain B728a) GN=glnD PE=3 SV=1
Length = 898
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 263 LELCTTDRVGLLSNVTRIFRENSLTVTRAEVATKSGKAVNTFYVGGASGYPV-DAKIIDS 321
LEL DR GLL+ + +IF E L++ A++AT + + F++ A+ +P+ D ++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 322 IRQSIGQTILKVKGNP 337
++ +I + L V P
Sbjct: 876 LQDAIVKQ-LSVNSEP 890
Score = 36.2 bits (82), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAISDPE- 107
T +EL DRPGLL+ + + ++ +A++ T R + +TD +SDP+
Sbjct: 814 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNHPLSDPQL 872
Query: 108 ----RLSVIKELLCNVLKGSN 124
+ +++K+L N G++
Sbjct: 873 CRQLQDAIVKQLSVNSEPGND 893
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 78/200 (39%), Gaps = 27/200 (13%)
Query: 49 TAIELTGSDRPGLLSEVSAVLTHLKCNVVSAEVWTHNTRAAALMQVTDEETGGAI-SDPE 107
T I + D+ + A + L N+ A + T +++ + + GG+I ++PE
Sbjct: 704 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGNNPE 763
Query: 108 RLSVIKELLCNVLKGSNKSGLAKTEVSQDVTHTERRLHQMMFADRDYERTGTDDDSLDEK 167
R+ I+E L L+ + T + + V R+L FA
Sbjct: 764 RIQDIREGLTEALRNPDDY---PTIIKRRVP---RQLKHFAFA----------------- 800
Query: 168 QRPNVNVVNCYDKDYSVVTITSKDRPKLVFDTVCTLTDMQYVVFHANIDAEGPEAYQEYF 227
P V + N + +V+ + + DRP L+ + + +A I G +F
Sbjct: 801 --PQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFF 858
Query: 228 IRHIDGSPVKSDAERERVIQ 247
I + P+ SD + R +Q
Sbjct: 859 ITDANNHPL-SDPQLCRQLQ 877
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 132,212,163
Number of Sequences: 539616
Number of extensions: 5302405
Number of successful extensions: 15821
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 15449
Number of HSP's gapped (non-prelim): 384
length of query: 372
length of database: 191,569,459
effective HSP length: 119
effective length of query: 253
effective length of database: 127,355,155
effective search space: 32220854215
effective search space used: 32220854215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)