Query 017377
Match_columns 372
No_of_seqs 430 out of 2634
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 13:26:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017377.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017377hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dh0_A SAM dependent methyltra 99.7 2.6E-16 8.9E-21 141.7 14.9 158 198-364 27-194 (219)
2 4hg2_A Methyltransferase type 99.7 2.5E-17 8.5E-22 154.0 8.3 99 218-322 41-139 (257)
3 3hnr_A Probable methyltransfer 99.7 5.1E-16 1.7E-20 139.9 16.2 138 218-360 47-205 (220)
4 1vl5_A Unknown conserved prote 99.7 3.6E-16 1.2E-20 145.0 13.4 112 197-320 26-142 (260)
5 1pjz_A Thiopurine S-methyltran 99.7 2E-16 6.8E-21 142.2 11.0 98 218-318 24-140 (203)
6 3h2b_A SAM-dependent methyltra 99.7 4.7E-16 1.6E-20 138.6 13.4 134 218-354 43-180 (203)
7 3i9f_A Putative type 11 methyl 99.7 4.2E-16 1.4E-20 135.0 11.6 128 218-354 19-146 (170)
8 1xtp_A LMAJ004091AAA; SGPP, st 99.7 2E-16 6.7E-21 145.6 9.6 135 218-354 95-236 (254)
9 3bus_A REBM, methyltransferase 99.7 1.5E-15 5.2E-20 141.4 15.6 118 193-321 46-169 (273)
10 4gek_A TRNA (CMO5U34)-methyltr 99.7 1.3E-15 4.4E-20 142.7 14.9 103 218-322 72-182 (261)
11 3l8d_A Methyltransferase; stru 99.6 2.3E-15 7.8E-20 137.5 15.5 133 218-354 55-198 (242)
12 2p7i_A Hypothetical protein; p 99.6 1.2E-15 4.1E-20 139.1 13.3 132 218-354 44-197 (250)
13 3ujc_A Phosphoethanolamine N-m 99.6 8.9E-16 3.1E-20 141.8 12.4 103 218-322 57-163 (266)
14 3kkz_A Uncharacterized protein 99.6 3.3E-15 1.1E-19 139.0 16.2 131 217-353 47-193 (267)
15 3f4k_A Putative methyltransfer 99.6 4.4E-15 1.5E-19 136.9 16.7 129 218-352 48-192 (257)
16 1nkv_A Hypothetical protein YJ 99.6 1.4E-15 4.9E-20 140.1 13.1 116 194-321 22-143 (256)
17 3ege_A Putative methyltransfer 99.6 1.1E-15 3.9E-20 142.1 12.4 115 194-322 20-134 (261)
18 2o57_A Putative sarcosine dime 99.6 1.4E-15 5E-20 143.6 13.1 119 193-322 63-191 (297)
19 3jwg_A HEN1, methyltransferase 99.6 5.8E-15 2E-19 133.1 16.3 161 195-365 16-212 (219)
20 3g5l_A Putative S-adenosylmeth 99.6 1.8E-15 6.2E-20 139.5 13.1 100 218-320 46-147 (253)
21 3dlc_A Putative S-adenosyl-L-m 99.6 3.5E-15 1.2E-19 133.5 14.5 101 218-321 45-151 (219)
22 1xxl_A YCGJ protein; structura 99.6 4.3E-15 1.5E-19 136.3 14.2 112 198-321 11-127 (239)
23 2gs9_A Hypothetical protein TT 99.6 4.7E-15 1.6E-19 132.8 13.3 100 218-323 38-137 (211)
24 3thr_A Glycine N-methyltransfe 99.6 2.3E-15 8E-20 141.7 11.1 115 194-320 43-177 (293)
25 3ccf_A Cyclopropane-fatty-acyl 99.6 5.1E-15 1.8E-19 138.8 13.2 111 199-322 48-158 (279)
26 3vc1_A Geranyl diphosphate 2-C 99.6 1.4E-14 4.9E-19 138.2 16.5 134 217-354 118-267 (312)
27 3dli_A Methyltransferase; PSI- 99.6 4E-15 1.4E-19 136.3 12.1 131 218-354 43-182 (240)
28 2p35_A Trans-aconitate 2-methy 99.6 6.4E-15 2.2E-19 135.8 13.3 101 218-321 35-135 (259)
29 2avn_A Ubiquinone/menaquinone 99.6 5.1E-15 1.8E-19 137.5 12.6 100 218-321 56-155 (260)
30 3ou2_A SAM-dependent methyltra 99.6 8E-15 2.7E-19 131.4 13.3 101 218-322 48-150 (218)
31 3bkw_A MLL3908 protein, S-aden 99.6 1E-14 3.4E-19 133.1 14.1 111 199-320 34-146 (243)
32 2gb4_A Thiopurine S-methyltran 99.6 6E-15 2.1E-19 137.4 12.7 98 218-318 70-191 (252)
33 3ofk_A Nodulation protein S; N 99.6 9.2E-15 3.1E-19 131.4 13.4 100 218-321 53-157 (216)
34 3jwh_A HEN1; methyltransferase 99.6 1.1E-14 3.9E-19 131.1 13.8 115 196-319 17-142 (217)
35 2yqz_A Hypothetical protein TT 99.6 9.5E-15 3.2E-19 134.8 13.4 96 218-317 41-140 (263)
36 4fsd_A Arsenic methyltransfera 99.6 5.3E-15 1.8E-19 145.6 12.4 135 216-351 83-246 (383)
37 4e2x_A TCAB9; kijanose, tetron 99.6 1E-15 3.5E-20 151.9 7.3 150 193-354 92-251 (416)
38 3lcc_A Putative methyl chlorid 99.6 2.6E-14 9E-19 130.3 15.6 130 218-353 68-204 (235)
39 3e23_A Uncharacterized protein 99.6 7.1E-15 2.4E-19 131.8 11.5 131 218-354 45-180 (211)
40 2xvm_A Tellurite resistance pr 99.6 3.5E-14 1.2E-18 125.3 15.6 100 218-321 34-139 (199)
41 3gu3_A Methyltransferase; alph 99.6 1.2E-14 4.2E-19 136.8 13.3 102 217-320 23-128 (284)
42 3cgg_A SAM-dependent methyltra 99.6 9.5E-14 3.3E-18 121.6 17.8 123 218-353 48-172 (195)
43 3dtn_A Putative methyltransfer 99.6 1.8E-14 6.1E-19 131.1 13.6 104 217-322 45-152 (234)
44 1kpg_A CFA synthase;, cyclopro 99.6 1.7E-14 5.9E-19 135.5 13.3 100 218-322 66-172 (287)
45 3pfg_A N-methyltransferase; N, 99.6 1.8E-14 6.2E-19 133.6 13.2 98 218-319 52-152 (263)
46 4htf_A S-adenosylmethionine-de 99.6 1.1E-14 3.8E-19 136.8 11.8 99 218-320 70-175 (285)
47 1ve3_A Hypothetical protein PH 99.6 1.6E-14 5.6E-19 130.3 12.3 100 218-320 40-144 (227)
48 3sm3_A SAM-dependent methyltra 99.6 6.3E-14 2.2E-18 126.8 16.1 102 218-323 32-146 (235)
49 3g5t_A Trans-aconitate 3-methy 99.6 1.9E-14 6.4E-19 136.4 13.1 98 218-317 38-148 (299)
50 2p8j_A S-adenosylmethionine-de 99.6 1.4E-14 4.8E-19 129.2 11.5 102 218-322 25-132 (209)
51 3e8s_A Putative SAM dependent 99.6 2.2E-14 7.5E-19 128.9 12.7 131 218-354 54-207 (227)
52 3mgg_A Methyltransferase; NYSG 99.6 2.1E-14 7.2E-19 134.0 12.2 102 218-321 39-145 (276)
53 3hem_A Cyclopropane-fatty-acyl 99.5 3.4E-14 1.2E-18 134.8 13.2 114 195-322 59-187 (302)
54 1vlm_A SAM-dependent methyltra 99.5 5.5E-14 1.9E-18 127.1 13.9 127 218-354 49-186 (219)
55 3mti_A RRNA methylase; SAM-dep 99.5 8E-14 2.7E-18 122.3 14.5 101 218-321 24-138 (185)
56 2pxx_A Uncharacterized protein 99.5 2.3E-14 8E-19 127.9 11.2 102 218-321 44-162 (215)
57 1y8c_A S-adenosylmethionine-de 99.5 4.3E-14 1.5E-18 128.8 12.8 117 195-321 22-145 (246)
58 3ocj_A Putative exported prote 99.5 1E-13 3.4E-18 131.9 15.8 104 218-322 120-231 (305)
59 3m70_A Tellurite resistance pr 99.5 1.1E-13 3.7E-18 130.0 15.9 100 218-321 122-226 (286)
60 1dus_A MJ0882; hypothetical pr 99.5 3.9E-13 1.3E-17 117.6 18.2 115 195-321 39-160 (194)
61 2ex4_A Adrenal gland protein A 99.5 2.1E-14 7.2E-19 131.6 10.4 136 217-354 80-223 (241)
62 2aot_A HMT, histamine N-methyl 99.5 1.3E-14 4.3E-19 137.3 8.7 104 217-321 53-175 (292)
63 3cc8_A Putative methyltransfer 99.5 2.5E-14 8.4E-19 128.9 10.2 131 218-354 34-183 (230)
64 2fk8_A Methoxy mycolic acid sy 99.5 6.1E-14 2.1E-18 133.9 13.4 101 218-323 92-199 (318)
65 2kw5_A SLR1183 protein; struct 99.5 6.2E-14 2.1E-18 124.6 12.5 100 219-323 32-136 (202)
66 3bxo_A N,N-dimethyltransferase 99.5 8.6E-14 3E-18 126.5 13.1 101 218-322 42-145 (239)
67 1zx0_A Guanidinoacetate N-meth 99.5 4.6E-14 1.6E-18 129.2 11.1 116 193-319 46-171 (236)
68 3iv6_A Putative Zn-dependent a 99.5 8.2E-14 2.8E-18 130.3 12.4 113 195-320 32-150 (261)
69 3orh_A Guanidinoacetate N-meth 99.5 4.5E-14 1.5E-18 129.8 10.1 113 194-318 47-170 (236)
70 3g2m_A PCZA361.24; SAM-depende 99.5 1.1E-13 3.7E-18 131.1 12.6 116 195-323 70-195 (299)
71 2vdw_A Vaccinia virus capping 99.5 4.4E-14 1.5E-18 134.9 9.6 102 217-320 49-171 (302)
72 1wzn_A SAM-dependent methyltra 99.5 2.3E-13 8E-18 125.0 13.8 99 218-320 43-147 (252)
73 3e05_A Precorrin-6Y C5,15-meth 99.5 2.4E-12 8.1E-17 114.8 19.6 132 195-351 27-163 (204)
74 3p9n_A Possible methyltransfer 99.5 3.5E-13 1.2E-17 118.9 13.8 104 218-323 46-158 (189)
75 1ri5_A MRNA capping enzyme; me 99.5 2.2E-13 7.7E-18 127.9 12.7 102 218-321 66-177 (298)
76 3hm2_A Precorrin-6Y C5,15-meth 99.5 4.8E-13 1.7E-17 116.0 13.4 112 195-320 12-129 (178)
77 2g72_A Phenylethanolamine N-me 99.5 9.4E-14 3.2E-18 130.9 9.0 134 218-353 73-253 (289)
78 2a14_A Indolethylamine N-methy 99.5 6.1E-14 2.1E-18 130.8 7.5 134 218-353 57-235 (263)
79 3htx_A HEN1; HEN1, small RNA m 99.5 4.2E-13 1.4E-17 141.3 14.4 118 195-321 708-837 (950)
80 2yxd_A Probable cobalt-precorr 99.5 1.1E-12 3.6E-17 113.9 14.8 138 194-362 21-163 (183)
81 3d2l_A SAM-dependent methyltra 99.5 4E-13 1.4E-17 122.4 12.4 98 218-320 35-139 (243)
82 3bkx_A SAM-dependent methyltra 99.5 2E-13 7E-18 127.1 10.5 119 195-322 30-163 (275)
83 3njr_A Precorrin-6Y methylase; 99.5 1.6E-12 5.3E-17 116.9 15.9 108 196-320 43-156 (204)
84 1p91_A Ribosomal RNA large sub 99.5 2.6E-13 8.8E-18 126.2 10.9 97 218-323 87-183 (269)
85 3eey_A Putative rRNA methylase 99.4 8.9E-13 3E-17 116.7 13.6 128 218-352 24-169 (197)
86 3q87_B N6 adenine specific DNA 99.4 3.6E-13 1.2E-17 117.4 10.7 114 218-353 25-146 (170)
87 2i62_A Nicotinamide N-methyltr 99.4 1.8E-13 6E-18 126.4 8.9 136 217-354 57-237 (265)
88 3m33_A Uncharacterized protein 99.4 6.8E-13 2.3E-17 120.6 12.7 88 218-315 50-139 (226)
89 3g07_A 7SK snRNA methylphospha 99.4 4E-13 1.4E-17 127.2 11.2 103 217-320 47-222 (292)
90 3grz_A L11 mtase, ribosomal pr 99.4 2.4E-12 8.1E-17 114.8 15.6 127 218-364 62-197 (205)
91 3bgv_A MRNA CAP guanine-N7 met 99.4 3.5E-13 1.2E-17 128.5 10.8 102 218-321 36-158 (313)
92 3ggd_A SAM-dependent methyltra 99.4 2.1E-13 7.2E-18 125.0 8.6 102 218-322 58-167 (245)
93 1l3i_A Precorrin-6Y methyltran 99.4 4E-12 1.4E-16 110.9 16.2 131 194-352 19-156 (192)
94 1yzh_A TRNA (guanine-N(7)-)-me 99.4 1.4E-12 4.8E-17 117.4 13.6 123 218-354 43-180 (214)
95 3fpf_A Mtnas, putative unchara 99.4 1.3E-12 4.4E-17 124.0 13.4 96 218-320 124-224 (298)
96 3evz_A Methyltransferase; NYSG 99.4 3.4E-12 1.2E-16 115.7 15.1 123 218-353 57-203 (230)
97 2zfu_A Nucleomethylin, cerebra 99.4 1.3E-12 4.4E-17 117.3 11.8 120 218-365 69-193 (215)
98 2fca_A TRNA (guanine-N(7)-)-me 99.4 1.5E-12 5.1E-17 117.7 12.3 100 218-319 40-154 (213)
99 3lbf_A Protein-L-isoaspartate 99.4 1.7E-12 5.7E-17 116.1 12.4 108 195-320 64-176 (210)
100 1nt2_A Fibrillarin-like PRE-rR 99.4 1.2E-12 4E-17 118.4 11.4 96 218-319 59-162 (210)
101 2r3s_A Uncharacterized protein 99.4 4.1E-12 1.4E-16 121.8 15.6 103 218-323 167-276 (335)
102 1xdz_A Methyltransferase GIDB; 99.4 2.2E-12 7.5E-17 118.4 13.0 120 217-352 71-198 (240)
103 2ift_A Putative methylase HI07 99.4 1.2E-12 4E-17 117.3 10.7 101 218-322 55-167 (201)
104 3mq2_A 16S rRNA methyltransfer 99.4 3.4E-12 1.2E-16 114.9 13.7 135 218-354 29-182 (218)
105 3dxy_A TRNA (guanine-N(7)-)-me 99.4 7.4E-13 2.5E-17 120.5 9.1 101 218-320 36-152 (218)
106 1vbf_A 231AA long hypothetical 99.4 2E-12 6.8E-17 117.3 11.8 110 195-322 57-169 (231)
107 3uwp_A Histone-lysine N-methyl 99.4 1.4E-12 4.8E-17 128.6 11.0 125 188-323 152-293 (438)
108 3dmg_A Probable ribosomal RNA 99.4 4.4E-12 1.5E-16 124.9 14.5 101 218-321 235-343 (381)
109 2qe6_A Uncharacterized protein 99.4 3.9E-12 1.3E-16 119.6 13.3 104 217-321 78-199 (274)
110 3hp7_A Hemolysin, putative; st 99.4 6.8E-12 2.3E-16 118.9 14.0 130 218-353 87-229 (291)
111 3dp7_A SAM-dependent methyltra 99.4 4.3E-12 1.5E-16 123.8 13.1 105 216-323 179-292 (363)
112 3lpm_A Putative methyltransfer 99.4 8.4E-12 2.9E-16 115.9 14.4 101 218-320 51-178 (259)
113 1af7_A Chemotaxis receptor met 99.4 5.5E-12 1.9E-16 118.8 13.1 101 218-318 107-252 (274)
114 3ckk_A TRNA (guanine-N(7)-)-me 99.4 2.6E-12 8.8E-17 118.2 10.6 101 218-320 48-170 (235)
115 2fpo_A Methylase YHHF; structu 99.4 4.4E-12 1.5E-16 113.6 11.7 116 194-321 39-163 (202)
116 4dcm_A Ribosomal RNA large sub 99.3 1.9E-11 6.5E-16 120.1 17.3 118 193-320 207-336 (375)
117 3q7e_A Protein arginine N-meth 99.3 2.9E-12 1E-16 124.6 11.2 96 218-316 68-171 (349)
118 2pjd_A Ribosomal RNA small sub 99.3 4.4E-12 1.5E-16 122.9 12.3 116 194-320 182-305 (343)
119 2fhp_A Methylase, putative; al 99.3 5.4E-12 1.9E-16 110.2 11.8 120 192-323 27-159 (187)
120 3fzg_A 16S rRNA methylase; met 99.3 9.9E-13 3.4E-17 116.8 6.9 113 193-318 36-152 (200)
121 4df3_A Fibrillarin-like rRNA/T 99.3 4.3E-12 1.5E-16 116.6 11.3 99 218-319 79-183 (233)
122 1dl5_A Protein-L-isoaspartate 99.3 4.6E-12 1.6E-16 121.4 11.8 112 195-321 62-178 (317)
123 3i53_A O-methyltransferase; CO 99.3 8E-12 2.7E-16 120.1 13.4 131 216-352 169-317 (332)
124 2fyt_A Protein arginine N-meth 99.3 4.2E-12 1.5E-16 123.0 11.5 95 218-315 66-168 (340)
125 1fbn_A MJ fibrillarin homologu 99.3 1.1E-11 3.7E-16 113.0 13.3 95 218-317 76-177 (230)
126 1ws6_A Methyltransferase; stru 99.3 2.1E-12 7.2E-17 111.0 8.0 116 194-323 25-152 (171)
127 3p2e_A 16S rRNA methylase; met 99.3 5.7E-12 1.9E-16 115.1 11.2 98 218-318 26-139 (225)
128 2pwy_A TRNA (adenine-N(1)-)-me 99.3 7.3E-12 2.5E-16 115.2 12.1 108 198-320 86-200 (258)
129 3g89_A Ribosomal RNA small sub 99.3 7.9E-12 2.7E-16 115.9 12.3 120 217-352 81-208 (249)
130 2frn_A Hypothetical protein PH 99.3 1.9E-11 6.4E-16 115.1 14.9 121 218-352 127-253 (278)
131 2esr_A Methyltransferase; stru 99.3 3.4E-12 1.2E-16 111.0 9.0 117 195-323 17-143 (177)
132 3gwz_A MMCR; methyltransferase 99.3 2E-11 6.8E-16 119.4 15.1 103 217-323 203-312 (369)
133 2yxe_A Protein-L-isoaspartate 99.3 8.9E-12 3E-16 111.8 11.6 111 195-321 64-180 (215)
134 4dzr_A Protein-(glutamine-N5) 99.3 1.6E-12 5.3E-17 115.8 6.5 116 194-319 15-166 (215)
135 1yb2_A Hypothetical protein TA 99.3 4.4E-12 1.5E-16 118.9 9.6 96 218-320 112-213 (275)
136 1jsx_A Glucose-inhibited divis 99.3 1.5E-11 5E-16 109.6 12.4 95 218-319 67-166 (207)
137 3r0q_C Probable protein argini 99.3 6.1E-12 2.1E-16 123.6 10.8 98 218-319 65-170 (376)
138 1i9g_A Hypothetical protein RV 99.3 1.8E-11 6.1E-16 114.4 13.4 110 197-320 88-205 (280)
139 1qzz_A RDMB, aclacinomycin-10- 99.3 1.4E-11 4.8E-16 120.1 12.8 99 217-319 183-288 (374)
140 1x19_A CRTF-related protein; m 99.3 2.2E-11 7.4E-16 118.4 13.9 100 218-321 192-298 (359)
141 3tfw_A Putative O-methyltransf 99.3 8.2E-11 2.8E-15 108.7 16.8 100 218-321 65-173 (248)
142 3mcz_A O-methyltransferase; ad 99.3 2.5E-11 8.5E-16 117.4 13.9 145 217-363 180-349 (352)
143 2nxc_A L11 mtase, ribosomal pr 99.3 1.4E-11 4.8E-16 114.3 11.4 116 218-353 122-241 (254)
144 3u81_A Catechol O-methyltransf 99.3 1.2E-11 4E-16 112.0 10.5 101 218-320 60-172 (221)
145 2ozv_A Hypothetical protein AT 99.3 2.1E-11 7.3E-16 113.5 12.6 101 218-319 38-171 (260)
146 3bzb_A Uncharacterized protein 99.3 4.2E-11 1.4E-15 112.8 14.6 100 218-320 81-207 (281)
147 1i1n_A Protein-L-isoaspartate 99.3 2.6E-11 8.8E-16 109.7 12.6 98 218-322 79-186 (226)
148 1g6q_1 HnRNP arginine N-methyl 99.3 1.8E-11 6.2E-16 117.9 12.1 111 195-316 25-143 (328)
149 1ej0_A FTSJ; methyltransferase 99.3 6.1E-12 2.1E-16 107.9 7.8 96 218-321 24-139 (180)
150 2b3t_A Protein methyltransfera 99.3 4E-11 1.4E-15 112.3 13.9 115 194-319 96-239 (276)
151 2y1w_A Histone-arginine methyl 99.3 1.8E-11 6.1E-16 118.9 11.7 112 195-318 37-155 (348)
152 1fp1_D Isoliquiritigenin 2'-O- 99.3 1.3E-11 4.5E-16 120.7 10.5 98 217-321 210-309 (372)
153 3mb5_A SAM-dependent methyltra 99.3 2E-11 6.9E-16 112.4 11.2 108 197-320 82-196 (255)
154 3id6_C Fibrillarin-like rRNA/T 99.3 6.3E-11 2.1E-15 108.8 14.4 99 218-320 78-183 (232)
155 1ixk_A Methyltransferase; open 99.3 5.3E-11 1.8E-15 114.1 14.5 136 199-351 109-270 (315)
156 1tw3_A COMT, carminomycin 4-O- 99.3 2.7E-11 9.2E-16 117.5 12.5 99 218-320 185-290 (360)
157 1jg1_A PIMT;, protein-L-isoasp 99.3 2.1E-11 7.1E-16 111.4 11.1 111 194-322 77-193 (235)
158 2bm8_A Cephalosporin hydroxyla 99.3 7.2E-12 2.5E-16 115.2 7.5 98 218-319 83-188 (236)
159 2pbf_A Protein-L-isoaspartate 99.3 2.9E-11 9.9E-16 109.4 11.3 96 218-320 82-195 (227)
160 3sso_A Methyltransferase; macr 99.2 3.4E-12 1.2E-16 125.4 5.5 98 217-320 217-326 (419)
161 3gdh_A Trimethylguanosine synt 99.2 9E-13 3.1E-17 120.5 1.3 96 218-318 80-181 (241)
162 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.8E-11 6.1E-16 111.6 9.8 99 218-320 79-184 (233)
163 2ip2_A Probable phenazine-spec 99.2 2.5E-11 8.5E-16 116.6 11.0 101 218-322 169-276 (334)
164 3dr5_A Putative O-methyltransf 99.2 2.3E-11 7.7E-16 110.8 10.2 99 218-320 58-165 (221)
165 3lst_A CALO1 methyltransferase 99.2 4.9E-11 1.7E-15 115.5 13.1 101 218-323 186-291 (348)
166 3reo_A (ISO)eugenol O-methyltr 99.2 3.2E-11 1.1E-15 118.0 11.5 101 217-323 204-305 (368)
167 2vdv_E TRNA (guanine-N(7)-)-me 99.2 4E-11 1.4E-15 110.4 11.4 100 218-319 51-174 (246)
168 1o9g_A RRNA methyltransferase; 99.2 4.3E-11 1.5E-15 110.3 11.6 103 218-320 53-216 (250)
169 3p9c_A Caffeic acid O-methyltr 99.2 4.4E-11 1.5E-15 116.9 12.2 101 217-323 202-303 (364)
170 3bwc_A Spermidine synthase; SA 99.2 7.2E-11 2.5E-15 112.6 13.4 125 217-351 96-235 (304)
171 2ld4_A Anamorsin; methyltransf 99.2 5.6E-12 1.9E-16 109.8 5.1 87 218-321 14-104 (176)
172 3ntv_A MW1564 protein; rossman 99.2 3.7E-11 1.3E-15 109.7 10.8 98 218-320 73-178 (232)
173 1u2z_A Histone-lysine N-methyl 99.2 4.5E-11 1.5E-15 119.2 12.0 118 194-322 228-363 (433)
174 1fp2_A Isoflavone O-methyltran 99.2 2.8E-11 9.5E-16 117.4 10.0 100 216-322 188-292 (352)
175 2plw_A Ribosomal RNA methyltra 99.2 5E-11 1.7E-15 105.6 10.9 97 218-320 24-156 (201)
176 3tma_A Methyltransferase; thum 99.2 4.4E-11 1.5E-15 116.2 11.4 118 195-320 190-319 (354)
177 1g8a_A Fibrillarin-like PRE-rR 99.2 8.9E-11 3.1E-15 106.3 12.7 98 218-319 75-179 (227)
178 1o54_A SAM-dependent O-methylt 99.2 6.8E-11 2.3E-15 110.7 12.1 107 199-320 103-215 (277)
179 2b25_A Hypothetical protein; s 99.2 4E-11 1.4E-15 115.5 10.6 109 197-320 94-221 (336)
180 2yvl_A TRMI protein, hypotheti 99.2 8.1E-11 2.8E-15 107.5 12.0 105 199-320 82-192 (248)
181 1r18_A Protein-L-isoaspartate( 99.2 6.3E-11 2.2E-15 107.5 10.8 95 218-320 86-196 (227)
182 2gpy_A O-methyltransferase; st 99.2 5.9E-11 2E-15 108.0 10.5 97 218-319 56-161 (233)
183 3c3p_A Methyltransferase; NP_9 99.2 6.2E-11 2.1E-15 106.1 10.2 97 218-319 58-161 (210)
184 3tr6_A O-methyltransferase; ce 99.2 4.4E-11 1.5E-15 107.9 9.0 100 218-321 66-177 (225)
185 3duw_A OMT, O-methyltransferas 99.2 8.7E-11 3E-15 106.0 10.6 100 218-321 60-170 (223)
186 2igt_A SAM dependent methyltra 99.2 2.3E-10 7.7E-15 110.6 13.5 125 218-351 155-299 (332)
187 3a27_A TYW2, uncharacterized p 99.2 4.8E-10 1.6E-14 105.1 15.2 124 218-354 121-249 (272)
188 4a6d_A Hydroxyindole O-methylt 99.2 1.6E-09 5.5E-14 105.3 19.4 146 217-366 180-349 (353)
189 3giw_A Protein of unknown func 99.1 6.9E-11 2.4E-15 110.9 8.7 107 216-322 78-204 (277)
190 3b3j_A Histone-arginine methyl 99.1 1.1E-10 3.7E-15 118.2 10.7 96 218-317 160-262 (480)
191 4azs_A Methyltransferase WBDD; 99.1 4.1E-11 1.4E-15 123.9 7.7 101 217-321 67-176 (569)
192 2yxl_A PH0851 protein, 450AA l 99.1 5.2E-10 1.8E-14 112.3 15.6 117 199-323 250-394 (450)
193 3adn_A Spermidine synthase; am 99.1 2.6E-10 8.8E-15 108.4 12.3 101 217-319 84-199 (294)
194 3ajd_A Putative methyltransfer 99.1 2.1E-10 7.1E-15 107.6 11.4 106 218-323 85-216 (274)
195 3opn_A Putative hemolysin; str 99.1 1.5E-10 5.1E-15 106.2 10.2 131 218-354 39-182 (232)
196 2oxt_A Nucleoside-2'-O-methylt 99.1 4.7E-11 1.6E-15 111.9 6.4 95 218-320 76-187 (265)
197 2wa2_A Non-structural protein 99.1 2.7E-11 9.2E-16 114.2 4.7 95 218-320 84-195 (276)
198 3r3h_A O-methyltransferase, SA 99.1 5.9E-11 2E-15 109.5 6.8 100 218-321 62-173 (242)
199 2hnk_A SAM-dependent O-methylt 99.1 2E-10 6.8E-15 105.1 10.3 98 218-319 62-182 (239)
200 1ne2_A Hypothetical protein TA 99.1 1.6E-09 5.4E-14 96.0 15.8 93 218-317 53-146 (200)
201 1xj5_A Spermidine synthase 1; 99.1 4.2E-10 1.4E-14 108.8 12.1 102 216-319 120-236 (334)
202 1zg3_A Isoflavanone 4'-O-methy 99.1 1.7E-10 5.7E-15 112.2 9.2 99 217-322 194-297 (358)
203 3cbg_A O-methyltransferase; cy 99.1 3.3E-10 1.1E-14 103.4 10.4 99 218-320 74-184 (232)
204 1sui_A Caffeoyl-COA O-methyltr 99.1 2E-10 6.8E-15 106.2 8.9 98 218-319 81-191 (247)
205 3gjy_A Spermidine synthase; AP 99.1 3.2E-10 1.1E-14 108.6 10.4 100 218-319 91-201 (317)
206 2i7c_A Spermidine synthase; tr 99.1 6.7E-10 2.3E-14 104.8 12.3 102 217-320 79-194 (283)
207 3m6w_A RRNA methylase; rRNA me 99.1 4.1E-10 1.4E-14 113.3 11.4 117 199-323 92-234 (464)
208 1nv8_A HEMK protein; class I a 99.1 4.3E-10 1.5E-14 106.2 10.8 114 194-319 109-250 (284)
209 2qm3_A Predicted methyltransfe 99.1 1.8E-09 6.1E-14 105.7 15.5 122 218-351 174-304 (373)
210 3tm4_A TRNA (guanine N2-)-meth 99.1 7.4E-10 2.5E-14 108.5 12.3 118 218-353 219-349 (373)
211 4hc4_A Protein arginine N-meth 99.1 4.1E-10 1.4E-14 110.4 10.4 94 218-315 85-186 (376)
212 2pt6_A Spermidine synthase; tr 99.1 8.8E-10 3E-14 105.9 12.4 102 217-320 117-232 (321)
213 2avd_A Catechol-O-methyltransf 99.1 3.1E-10 1.1E-14 102.6 8.8 99 218-320 71-181 (229)
214 2o07_A Spermidine synthase; st 99.1 4.8E-10 1.7E-14 107.0 10.5 102 217-320 96-211 (304)
215 2nyu_A Putative ribosomal RNA 99.1 2.4E-10 8.1E-15 100.7 7.7 97 218-320 24-147 (196)
216 1iy9_A Spermidine synthase; ro 99.1 6.2E-10 2.1E-14 104.6 11.0 102 217-320 76-191 (275)
217 1inl_A Spermidine synthase; be 99.1 7.2E-10 2.5E-14 105.3 11.2 102 217-320 91-207 (296)
218 1wy7_A Hypothetical protein PH 99.0 1.7E-08 5.6E-13 89.7 19.0 116 218-352 51-171 (207)
219 3lec_A NADB-rossmann superfami 99.0 2.4E-09 8.1E-14 98.0 13.6 119 218-354 23-147 (230)
220 1sqg_A SUN protein, FMU protei 99.0 9.1E-10 3.1E-14 109.9 11.6 117 198-323 236-379 (429)
221 2b2c_A Spermidine synthase; be 99.0 6.7E-10 2.3E-14 106.5 10.3 101 217-319 109-223 (314)
222 1uir_A Polyamine aminopropyltr 99.0 3.8E-10 1.3E-14 108.1 8.3 101 217-319 78-196 (314)
223 2b78_A Hypothetical protein SM 99.0 1.4E-09 4.7E-14 107.1 12.3 125 218-351 214-357 (385)
224 2cmg_A Spermidine synthase; tr 99.0 9.2E-10 3.2E-14 102.8 10.5 92 217-320 73-173 (262)
225 3c3y_A Pfomt, O-methyltransfer 99.0 7.8E-10 2.7E-14 101.4 9.8 98 218-319 72-182 (237)
226 3gnl_A Uncharacterized protein 99.0 2.9E-09 9.9E-14 98.3 13.5 118 218-353 23-146 (244)
227 4dmg_A Putative uncharacterize 99.0 2.1E-09 7.2E-14 106.1 13.3 122 218-349 216-350 (393)
228 3c0k_A UPF0064 protein YCCW; P 99.0 3.1E-09 1.1E-13 104.8 14.3 103 218-322 222-343 (396)
229 2frx_A Hypothetical protein YE 99.0 2E-09 7E-14 108.8 13.0 106 218-323 119-251 (479)
230 2h00_A Methyltransferase 10 do 99.0 4E-10 1.4E-14 103.8 6.6 100 217-317 66-191 (254)
231 1zq9_A Probable dimethyladenos 99.0 1.8E-09 6.1E-14 102.0 11.2 108 194-315 14-144 (285)
232 1mjf_A Spermidine synthase; sp 99.0 2.1E-09 7.3E-14 101.2 11.5 99 217-319 76-194 (281)
233 2p41_A Type II methyltransfera 99.0 2.6E-10 8.9E-15 108.9 5.2 98 218-321 84-194 (305)
234 3kr9_A SAM-dependent methyltra 99.0 6.3E-09 2.2E-13 94.9 14.0 118 218-354 17-141 (225)
235 3dou_A Ribosomal RNA large sub 99.0 1.2E-09 4.1E-14 97.1 8.5 93 218-319 27-140 (191)
236 1wxx_A TT1595, hypothetical pr 99.0 2.9E-09 9.8E-14 104.6 11.8 102 218-322 211-329 (382)
237 3m4x_A NOL1/NOP2/SUN family pr 99.0 2.8E-09 9.5E-14 107.1 11.6 136 199-351 96-258 (456)
238 2as0_A Hypothetical protein PH 99.0 3E-09 1E-13 104.9 11.6 104 218-323 219-340 (396)
239 3frh_A 16S rRNA methylase; met 98.9 1.7E-09 5.7E-14 99.3 8.5 97 216-317 105-205 (253)
240 2f8l_A Hypothetical protein LM 98.9 4.3E-09 1.5E-13 101.7 11.5 103 218-321 132-259 (344)
241 2h1r_A Dimethyladenosine trans 98.9 3.9E-09 1.3E-13 100.4 10.1 105 194-312 28-153 (299)
242 3lcv_B Sisomicin-gentamicin re 98.9 4.8E-09 1.6E-13 97.3 10.0 100 217-318 133-236 (281)
243 3v97_A Ribosomal RNA large sub 98.9 9E-09 3.1E-13 108.8 11.7 104 218-323 541-662 (703)
244 2xyq_A Putative 2'-O-methyl tr 98.8 1.6E-08 5.4E-13 95.8 11.9 92 218-321 65-174 (290)
245 3k6r_A Putative transferase PH 98.8 2.2E-08 7.6E-13 94.2 12.4 133 218-364 127-265 (278)
246 1qam_A ERMC' methyltransferase 98.8 3E-08 1E-12 91.4 11.6 109 194-315 16-143 (244)
247 2ih2_A Modification methylase 98.8 7.9E-09 2.7E-13 102.0 8.0 115 194-321 25-167 (421)
248 1yub_A Ermam, rRNA methyltrans 98.8 1.9E-10 6.6E-15 106.0 -3.4 112 195-319 16-146 (245)
249 1uwv_A 23S rRNA (uracil-5-)-me 98.8 7.4E-08 2.5E-12 96.1 14.4 110 194-319 272-390 (433)
250 2jjq_A Uncharacterized RNA met 98.8 1E-07 3.5E-12 94.9 15.2 93 218-319 292-388 (425)
251 2yx1_A Hypothetical protein MJ 98.7 2E-08 6.9E-13 96.9 9.2 92 218-321 197-294 (336)
252 3gru_A Dimethyladenosine trans 98.7 2.4E-08 8.2E-13 94.8 8.4 88 194-293 36-126 (295)
253 2okc_A Type I restriction enzy 98.7 3.6E-08 1.2E-12 98.7 9.7 117 195-320 158-309 (445)
254 2qfm_A Spermine synthase; sper 98.7 5E-08 1.7E-12 94.7 9.7 103 216-320 188-316 (364)
255 3ldu_A Putative methylase; str 98.6 2.5E-07 8.6E-12 91.0 11.7 102 218-320 197-346 (385)
256 3k0b_A Predicted N6-adenine-sp 98.6 3.2E-07 1.1E-11 90.5 12.5 102 218-320 203-352 (393)
257 3ldg_A Putative uncharacterize 98.6 4.4E-07 1.5E-11 89.2 13.1 117 195-320 181-345 (384)
258 3tqs_A Ribosomal RNA small sub 98.6 1.3E-07 4.5E-12 87.8 8.6 82 194-287 15-103 (255)
259 3evf_A RNA-directed RNA polyme 98.5 3.3E-07 1.1E-11 85.4 9.9 102 218-320 76-186 (277)
260 2b9e_A NOL1/NOP2/SUN domain fa 98.5 9.5E-07 3.2E-11 84.3 13.2 115 200-323 94-239 (309)
261 3fut_A Dimethyladenosine trans 98.5 5.3E-07 1.8E-11 84.5 10.2 87 194-293 33-122 (271)
262 3bt7_A TRNA (uracil-5-)-methyl 98.5 2.2E-07 7.5E-12 90.7 7.6 93 218-320 215-328 (369)
263 3uzu_A Ribosomal RNA small sub 98.4 3.4E-07 1.2E-11 86.2 7.6 86 194-287 28-121 (279)
264 3ftd_A Dimethyladenosine trans 98.4 2.2E-06 7.5E-11 79.2 11.3 84 194-287 17-102 (249)
265 2ar0_A M.ecoki, type I restric 98.4 6.9E-07 2.4E-11 91.6 8.4 118 195-320 156-314 (541)
266 3axs_A Probable N(2),N(2)-dime 98.3 1.6E-06 5.6E-11 85.3 10.6 97 218-319 54-159 (392)
267 3b5i_A S-adenosyl-L-methionine 98.3 1.9E-06 6.6E-11 84.2 10.8 106 217-323 53-230 (374)
268 2efj_A 3,7-dimethylxanthine me 98.3 2.2E-06 7.4E-11 84.0 10.8 106 217-323 53-230 (384)
269 4gqb_A Protein arginine N-meth 98.3 4.6E-06 1.6E-10 86.6 13.1 119 195-315 336-464 (637)
270 3v97_A Ribosomal RNA large sub 98.3 4.4E-06 1.5E-10 88.2 12.4 118 195-321 177-350 (703)
271 1m6y_A S-adenosyl-methyltransf 98.2 1.3E-06 4.3E-11 83.1 6.7 85 195-288 13-106 (301)
272 2dul_A N(2),N(2)-dimethylguano 98.2 1.4E-06 4.6E-11 85.5 7.1 95 218-318 49-164 (378)
273 3khk_A Type I restriction-modi 98.2 3.6E-06 1.2E-10 86.3 9.2 117 195-320 232-397 (544)
274 3lkd_A Type I restriction-modi 98.2 1.3E-05 4.5E-10 82.0 13.0 122 195-320 204-360 (542)
275 1qyr_A KSGA, high level kasuga 98.1 2.1E-06 7.4E-11 79.4 5.9 84 194-288 7-98 (252)
276 2r6z_A UPF0341 protein in RSP 98.1 5.3E-06 1.8E-10 77.0 8.5 69 218-289 85-170 (258)
277 1m6e_X S-adenosyl-L-methionnin 98.1 2.1E-06 7.3E-11 83.4 4.8 106 217-323 52-214 (359)
278 3gcz_A Polyprotein; flavivirus 98.1 6.1E-06 2.1E-10 77.0 7.3 101 218-320 92-203 (282)
279 3o4f_A Spermidine synthase; am 98.0 4.4E-05 1.5E-09 72.1 13.0 104 216-321 83-201 (294)
280 3ua3_A Protein arginine N-meth 97.9 1.2E-05 4E-10 83.9 7.4 98 218-315 411-531 (745)
281 3s1s_A Restriction endonucleas 97.9 4.3E-05 1.5E-09 80.8 11.0 103 218-320 323-467 (878)
282 3cvo_A Methyltransferase-like 97.9 0.00011 3.6E-09 65.7 11.8 91 218-318 32-154 (202)
283 3ll7_A Putative methyltransfer 97.9 9.5E-06 3.2E-10 80.2 5.0 67 218-287 95-170 (410)
284 3gp4_A Transcriptional regulat 97.8 2.8E-06 9.6E-11 71.8 -0.7 61 27-90 5-66 (142)
285 4auk_A Ribosomal RNA large sub 97.8 0.00034 1.2E-08 67.9 13.8 119 217-349 212-333 (375)
286 3hh0_A Transcriptional regulat 97.8 2.6E-06 8.7E-11 72.4 -1.0 55 27-81 7-62 (146)
287 2oyr_A UPF0341 protein YHIQ; a 97.7 3E-05 1E-09 72.0 5.9 90 218-312 90-194 (258)
288 2qy6_A UPF0209 protein YFCK; s 97.7 3.3E-05 1.1E-09 71.6 5.9 101 216-316 60-211 (257)
289 3gpv_A Transcriptional regulat 97.7 2.7E-06 9.4E-11 72.4 -1.5 63 25-90 17-80 (148)
290 2vz4_A Tipal, HTH-type transcr 97.7 3.7E-06 1.3E-10 67.6 -1.1 54 28-81 5-59 (108)
291 4fzv_A Putative methyltransfer 97.7 0.00021 7.1E-09 69.4 10.9 117 200-325 140-291 (359)
292 1q06_A Transcriptional regulat 97.6 4.8E-06 1.7E-10 69.7 -1.1 54 28-81 4-58 (135)
293 2zhg_A Redox-sensitive transcr 97.6 3.4E-06 1.2E-10 72.3 -2.4 56 26-81 13-68 (154)
294 3eld_A Methyltransferase; flav 97.6 0.00022 7.4E-09 66.9 9.5 101 218-320 83-193 (300)
295 2jml_A DNA binding domain/tran 97.6 3.8E-06 1.3E-10 63.9 -2.2 55 27-81 8-65 (81)
296 1r8d_A Transcription activator 97.6 6.2E-06 2.1E-10 66.4 -1.1 54 28-81 6-60 (109)
297 2wk1_A NOVP; transferase, O-me 97.5 0.001 3.5E-08 62.3 12.9 134 217-363 107-281 (282)
298 2k4m_A TR8_protein, UPF0146 pr 97.5 0.00011 3.7E-09 62.1 4.9 82 218-319 37-122 (153)
299 2dg6_A Putative transcriptiona 97.4 1.6E-05 5.3E-10 72.2 -1.0 60 28-90 4-65 (222)
300 3qao_A LMO0526 protein, MERR-l 97.3 1.7E-05 5.9E-10 73.2 -1.6 55 27-81 6-61 (249)
301 3c6k_A Spermine synthase; sper 97.3 0.00059 2E-08 66.4 9.0 102 216-319 205-332 (381)
302 1r8e_A Multidrug-efflux transp 97.1 4.5E-05 1.5E-09 71.0 -1.8 62 27-91 8-71 (278)
303 1wg8_A Predicted S-adenosylmet 97.0 0.0019 6.5E-08 60.3 8.8 82 194-287 8-96 (285)
304 3ufb_A Type I restriction-modi 97.0 0.0043 1.5E-07 63.2 12.1 126 186-320 196-364 (530)
305 3lkz_A Non-structural protein 97.0 0.007 2.4E-07 56.7 11.8 101 218-323 96-209 (321)
306 2zig_A TTHA0409, putative modi 96.9 0.0019 6.5E-08 60.7 7.8 54 195-260 223-276 (297)
307 2px2_A Genome polyprotein [con 96.8 0.0024 8.1E-08 58.8 7.1 98 218-320 75-185 (269)
308 2vz8_A Fatty acid synthase; tr 96.8 0.00036 1.2E-08 83.0 1.8 101 218-319 1242-1349(2512)
309 3p8z_A Mtase, non-structural p 96.7 0.0073 2.5E-07 54.9 9.5 99 218-322 80-190 (267)
310 1g60_A Adenine-specific methyl 95.3 0.043 1.5E-06 50.3 8.0 54 195-260 200-253 (260)
311 1g55_A DNA cytosine methyltran 95.1 0.11 3.7E-06 49.7 10.3 70 218-287 3-75 (343)
312 3r24_A NSP16, 2'-O-methyl tran 94.7 0.052 1.8E-06 50.8 6.5 96 217-322 110-221 (344)
313 2zig_A TTHA0409, putative modi 94.5 0.054 1.8E-06 50.6 6.5 96 265-364 23-140 (297)
314 1f8f_A Benzyl alcohol dehydrog 94.5 0.05 1.7E-06 52.3 6.2 93 218-320 192-291 (371)
315 2dph_A Formaldehyde dismutase; 94.4 0.17 5.9E-06 49.0 10.0 99 218-320 187-301 (398)
316 1boo_A Protein (N-4 cytosine-s 94.2 0.12 4E-06 49.0 8.0 83 276-364 29-124 (323)
317 1pqw_A Polyketide synthase; ro 94.0 0.088 3E-06 45.5 6.2 88 218-319 40-138 (198)
318 1pl8_A Human sorbitol dehydrog 93.9 0.21 7.1E-06 47.6 9.3 92 218-319 173-274 (356)
319 1i4w_A Mitochondrial replicati 93.8 0.12 4.2E-06 49.7 7.4 75 194-271 38-114 (353)
320 3two_A Mannitol dehydrogenase; 93.7 0.16 5.4E-06 48.2 8.1 90 218-321 178-268 (348)
321 4ej6_A Putative zinc-binding d 93.1 0.59 2E-05 44.7 11.0 94 218-321 184-287 (370)
322 1e3j_A NADP(H)-dependent ketos 93.0 0.49 1.7E-05 44.8 10.2 92 218-319 170-272 (352)
323 3qv2_A 5-cytosine DNA methyltr 93.0 0.52 1.8E-05 44.7 10.2 125 218-352 11-156 (327)
324 1v3u_A Leukotriene B4 12- hydr 92.7 0.24 8.3E-06 46.5 7.6 89 218-319 147-245 (333)
325 4h0n_A DNMT2; SAH binding, tra 92.6 0.64 2.2E-05 44.2 10.4 70 218-287 4-76 (333)
326 1uuf_A YAHK, zinc-type alcohol 92.6 0.16 5.6E-06 48.8 6.2 90 218-319 196-289 (369)
327 1kol_A Formaldehyde dehydrogen 92.6 0.75 2.6E-05 44.3 11.0 97 218-319 187-301 (398)
328 3uog_A Alcohol dehydrogenase; 92.5 0.25 8.6E-06 47.2 7.5 93 218-321 191-290 (363)
329 3fpc_A NADP-dependent alcohol 92.1 0.34 1.2E-05 46.0 7.7 93 218-320 168-268 (352)
330 3s2e_A Zinc-containing alcohol 92.1 0.41 1.4E-05 45.1 8.3 91 218-320 168-265 (340)
331 3g7u_A Cytosine-specific methy 92.1 0.43 1.5E-05 46.2 8.4 124 218-350 3-145 (376)
332 3tka_A Ribosomal RNA small sub 91.9 0.3 1E-05 46.6 6.9 57 194-258 43-99 (347)
333 1g60_A Adenine-specific methyl 91.6 0.44 1.5E-05 43.4 7.6 50 298-364 54-103 (260)
334 3vyw_A MNMC2; tRNA wobble urid 90.9 0.84 2.9E-05 42.9 8.8 97 218-316 98-224 (308)
335 2j3h_A NADP-dependent oxidored 90.8 0.52 1.8E-05 44.4 7.5 91 218-319 157-256 (345)
336 1rjw_A ADH-HT, alcohol dehydro 90.8 0.99 3.4E-05 42.5 9.4 91 218-320 166-263 (339)
337 4b7c_A Probable oxidoreductase 90.8 0.42 1.4E-05 44.9 6.8 89 218-319 151-249 (336)
338 1p0f_A NADP-dependent alcohol 90.5 0.37 1.3E-05 46.1 6.2 94 218-320 193-295 (373)
339 2h6e_A ADH-4, D-arabinose 1-de 90.4 0.29 9.9E-06 46.3 5.3 94 218-319 172-270 (344)
340 3gms_A Putative NADPH:quinone 90.3 0.33 1.1E-05 45.8 5.7 90 218-320 146-245 (340)
341 1jvb_A NAD(H)-dependent alcoho 90.3 0.37 1.3E-05 45.6 6.0 94 218-320 172-273 (347)
342 1cdo_A Alcohol dehydrogenase; 90.2 0.34 1.2E-05 46.4 5.7 93 218-320 194-296 (374)
343 2jhf_A Alcohol dehydrogenase E 90.1 0.41 1.4E-05 45.8 6.2 92 218-319 193-294 (374)
344 1rjd_A PPM1P, carboxy methyl t 90.1 2.1 7.2E-05 40.6 11.1 101 217-320 98-234 (334)
345 2fzw_A Alcohol dehydrogenase c 89.9 0.4 1.4E-05 45.8 5.9 92 218-319 192-293 (373)
346 2eih_A Alcohol dehydrogenase; 89.7 0.65 2.2E-05 43.8 7.1 89 218-319 168-266 (343)
347 3uko_A Alcohol dehydrogenase c 89.5 0.48 1.6E-05 45.4 6.1 94 218-320 195-297 (378)
348 2hcy_A Alcohol dehydrogenase 1 89.5 0.44 1.5E-05 45.1 5.8 93 218-320 171-271 (347)
349 3m6i_A L-arabinitol 4-dehydrog 89.5 2.1 7E-05 40.5 10.6 94 218-320 181-285 (363)
350 3jv7_A ADH-A; dehydrogenase, n 89.4 0.56 1.9E-05 44.2 6.4 94 218-321 173-273 (345)
351 1e3i_A Alcohol dehydrogenase, 89.3 0.41 1.4E-05 45.8 5.4 92 218-319 197-298 (376)
352 3goh_A Alcohol dehydrogenase, 88.8 0.29 9.9E-06 45.6 3.9 86 218-319 144-230 (315)
353 3jyn_A Quinone oxidoreductase; 88.4 0.73 2.5E-05 43.1 6.5 90 218-320 142-241 (325)
354 1piw_A Hypothetical zinc-type 88.1 0.31 1.1E-05 46.4 3.7 93 218-319 181-277 (360)
355 2c0c_A Zinc binding alcohol de 88.0 2.1 7.3E-05 40.6 9.6 91 218-319 165-262 (362)
356 1yb5_A Quinone oxidoreductase; 88.0 0.84 2.9E-05 43.3 6.6 89 218-319 172-270 (351)
357 1eg2_A Modification methylase 88.0 1.3 4.5E-05 41.7 7.9 79 277-364 55-144 (319)
358 1qor_A Quinone oxidoreductase; 87.6 0.8 2.8E-05 42.7 6.2 89 218-319 142-240 (327)
359 2py6_A Methyltransferase FKBM; 87.2 0.83 2.8E-05 44.6 6.2 44 216-259 226-270 (409)
360 3qwb_A Probable quinone oxidor 87.2 1 3.6E-05 42.1 6.7 89 218-319 150-248 (334)
361 2qrv_A DNA (cytosine-5)-methyl 87.1 1.2 4E-05 41.6 6.9 71 217-287 16-90 (295)
362 3nx4_A Putative oxidoreductase 86.9 1.3 4.3E-05 41.2 7.1 92 219-320 149-243 (324)
363 2c7p_A Modification methylase 86.7 1.1 3.8E-05 42.3 6.6 124 218-351 12-148 (327)
364 1boo_A Protein (N-4 cytosine-s 86.4 1.7 5.8E-05 40.9 7.7 54 195-260 240-293 (323)
365 2b5w_A Glucose dehydrogenase; 86.3 1 3.6E-05 42.6 6.3 90 218-320 174-275 (357)
366 2d8a_A PH0655, probable L-thre 86.0 1.1 3.7E-05 42.3 6.1 90 218-319 169-268 (348)
367 3ip1_A Alcohol dehydrogenase, 85.9 2.4 8.3E-05 40.8 8.7 93 218-321 215-321 (404)
368 1vj0_A Alcohol dehydrogenase, 85.8 1.4 4.8E-05 42.2 6.9 94 218-320 197-300 (380)
369 2uyo_A Hypothetical protein ML 85.6 6.8 0.00023 36.6 11.4 102 216-321 102-221 (310)
370 1iz0_A Quinone oxidoreductase; 85.4 1 3.6E-05 41.5 5.6 90 218-319 127-219 (302)
371 4eye_A Probable oxidoreductase 85.3 1 3.4E-05 42.5 5.6 90 218-319 161-258 (342)
372 4dvj_A Putative zinc-dependent 85.2 2.9 9.8E-05 39.7 8.8 90 218-318 173-270 (363)
373 3ps9_A TRNA 5-methylaminomethy 84.4 2.6 9E-05 43.5 8.7 100 218-317 68-218 (676)
374 1wly_A CAAR, 2-haloacrylate re 84.1 1.8 6.1E-05 40.4 6.7 89 218-319 147-245 (333)
375 2j8z_A Quinone oxidoreductase; 84.1 1.6 5.6E-05 41.2 6.5 91 218-319 164-262 (354)
376 4eez_A Alcohol dehydrogenase 1 84.1 3.9 0.00013 38.2 9.1 95 218-321 165-266 (348)
377 1xa0_A Putative NADPH dependen 83.9 1.4 4.9E-05 41.0 5.9 91 219-319 152-247 (328)
378 1tt7_A YHFP; alcohol dehydroge 82.9 1.2 4.2E-05 41.5 4.9 90 219-319 153-248 (330)
379 2cf5_A Atccad5, CAD, cinnamyl 82.5 1.1 3.6E-05 42.6 4.4 93 218-319 182-276 (357)
380 2cdc_A Glucose dehydrogenase g 82.4 2.6 8.8E-05 40.0 7.1 88 218-320 182-280 (366)
381 1eg2_A Modification methylase 82.2 2.6 8.8E-05 39.7 6.9 55 195-261 230-287 (319)
382 3fbg_A Putative arginate lyase 82.1 2.6 8.8E-05 39.6 6.9 89 218-318 152-248 (346)
383 3pvc_A TRNA 5-methylaminomethy 81.8 2.3 7.8E-05 44.2 7.0 100 217-316 59-209 (689)
384 4dup_A Quinone oxidoreductase; 81.6 1.7 5.8E-05 41.1 5.5 89 218-319 169-266 (353)
385 3ubt_Y Modification methylase 80.7 20 0.00067 33.1 12.5 126 219-353 2-140 (331)
386 1yqd_A Sinapyl alcohol dehydro 80.6 1.5 5.1E-05 41.8 4.7 93 218-319 189-283 (366)
387 2zb4_A Prostaglandin reductase 80.0 3.2 0.00011 39.1 6.8 89 218-319 162-261 (357)
388 3krt_A Crotonyl COA reductase; 79.9 7.1 0.00024 38.2 9.5 90 218-320 230-346 (456)
389 3fwz_A Inner membrane protein 79.7 1.8 6E-05 35.1 4.3 93 218-319 8-106 (140)
390 3gaz_A Alcohol dehydrogenase s 79.3 2.3 8E-05 39.9 5.6 88 218-319 152-247 (343)
391 3dmg_A Probable ribosomal RNA 78.0 11 0.00037 36.2 9.9 90 218-320 47-141 (381)
392 2oo3_A Protein involved in cat 76.9 3.2 0.00011 38.4 5.5 100 218-321 93-201 (283)
393 3tos_A CALS11; methyltransfera 76.8 11 0.00037 34.3 9.0 100 218-320 71-219 (257)
394 4a2c_A Galactitol-1-phosphate 76.7 7.9 0.00027 36.0 8.4 92 218-321 162-263 (346)
395 3tqh_A Quinone oxidoreductase; 76.5 5.9 0.0002 36.7 7.4 88 218-319 154-246 (321)
396 4a0s_A Octenoyl-COA reductase/ 75.4 11 0.00039 36.5 9.4 92 218-320 222-338 (447)
397 2dq4_A L-threonine 3-dehydroge 75.3 2 6.7E-05 40.4 3.7 89 218-319 166-263 (343)
398 2km1_A Protein DRE2; yeast, an 74.1 2 6.8E-05 35.4 2.9 44 273-316 52-96 (136)
399 3c85_A Putative glutathione-re 70.1 5.2 0.00018 33.6 4.9 95 218-319 40-140 (183)
400 2vn8_A Reticulon-4-interacting 69.6 6.5 0.00022 37.3 6.0 90 218-319 185-281 (375)
401 1zkd_A DUF185; NESG, RPR58, st 69.0 6.4 0.00022 38.1 5.7 43 218-260 82-130 (387)
402 3gqv_A Enoyl reductase; medium 67.8 7.8 0.00027 36.7 6.1 91 218-319 166-264 (371)
403 3ggo_A Prephenate dehydrogenas 67.8 37 0.0013 31.4 10.7 90 218-315 34-125 (314)
404 1zsy_A Mitochondrial 2-enoyl t 66.6 33 0.0011 32.0 10.3 91 218-318 169-270 (357)
405 3l9w_A Glutathione-regulated p 66.3 6.9 0.00024 38.1 5.5 95 218-321 5-105 (413)
406 3me5_A Cytosine-specific methy 65.4 49 0.0017 32.8 11.5 41 218-260 89-129 (482)
407 2vhw_A Alanine dehydrogenase; 61.7 3.5 0.00012 39.6 2.3 100 216-318 167-268 (377)
408 3pi7_A NADH oxidoreductase; gr 61.3 9.2 0.00031 35.8 5.2 89 218-319 166-264 (349)
409 2f1k_A Prephenate dehydrogenas 58.2 55 0.0019 29.0 9.7 85 219-315 2-88 (279)
410 4f3n_A Uncharacterized ACR, CO 56.4 7.2 0.00025 38.3 3.5 41 218-258 139-183 (432)
411 3p2y_A Alanine dehydrogenase/p 55.4 7.4 0.00025 37.6 3.4 96 217-317 184-301 (381)
412 3ce6_A Adenosylhomocysteinase; 53.9 16 0.00053 36.6 5.5 87 218-319 275-362 (494)
413 2eez_A Alanine dehydrogenase; 53.0 7.1 0.00024 37.2 2.8 99 217-318 166-266 (369)
414 2ew2_A 2-dehydropantoate 2-red 52.7 70 0.0024 28.6 9.6 93 218-317 4-107 (316)
415 3llv_A Exopolyphosphatase-rela 52.6 46 0.0016 26.1 7.4 90 218-319 7-104 (141)
416 3swr_A DNA (cytosine-5)-methyl 52.6 26 0.00088 38.1 7.4 128 217-351 540-697 (1002)
417 3hwr_A 2-dehydropantoate 2-red 51.6 85 0.0029 28.7 10.1 93 218-319 20-121 (318)
418 2g5c_A Prephenate dehydrogenas 51.0 77 0.0026 28.1 9.5 89 219-316 3-94 (281)
419 3g0o_A 3-hydroxyisobutyrate de 50.1 55 0.0019 29.7 8.4 88 218-316 8-100 (303)
420 4dcm_A Ribosomal RNA large sub 49.0 98 0.0034 29.2 10.3 92 218-320 40-138 (375)
421 3ius_A Uncharacterized conserv 48.8 1.4E+02 0.0047 26.1 11.0 66 218-289 6-72 (286)
422 1zcj_A Peroxisomal bifunctiona 47.6 1.1E+02 0.0037 29.8 10.6 90 217-316 37-148 (463)
423 4hp8_A 2-deoxy-D-gluconate 3-d 47.1 85 0.0029 28.0 8.9 72 218-290 10-89 (247)
424 3c24_A Putative oxidoreductase 46.6 94 0.0032 27.7 9.3 84 218-315 12-98 (286)
425 1j9i_A GPNU1 DBD;, terminase s 45.6 3.7 0.00013 29.0 -0.4 44 30-74 8-53 (68)
426 4a27_A Synaptic vesicle membra 44.9 16 0.00056 34.0 3.9 89 218-319 144-239 (349)
427 3nbm_A PTS system, lactose-spe 44.5 46 0.0016 25.8 5.9 79 218-319 7-85 (108)
428 1tvm_A PTS system, galactitol- 42.3 49 0.0017 25.6 5.8 54 219-287 23-76 (113)
429 3b1f_A Putative prephenate deh 42.0 1.3E+02 0.0043 26.8 9.4 89 218-315 7-98 (290)
430 4gua_A Non-structural polyprot 40.1 54 0.0019 33.3 6.8 69 274-352 216-294 (670)
431 1pjc_A Protein (L-alanine dehy 39.9 7 0.00024 37.1 0.4 99 217-319 167-268 (361)
432 3trk_A Nonstructural polyprote 39.5 28 0.00097 31.9 4.3 62 278-348 209-280 (324)
433 3k6j_A Protein F01G10.3, confi 39.4 2.1E+02 0.0073 27.9 11.2 91 217-316 54-164 (460)
434 1gu7_A Enoyl-[acyl-carrier-pro 38.8 37 0.0012 31.6 5.4 91 218-319 169-276 (364)
435 4dio_A NAD(P) transhydrogenase 37.9 34 0.0012 33.2 5.0 96 217-317 190-311 (405)
436 1l7d_A Nicotinamide nucleotide 37.2 12 0.0004 35.9 1.6 99 216-318 171-294 (384)
437 2l9u_A Receptor tyrosine-prote 37.0 19 0.00065 22.2 1.9 25 21-45 7-31 (40)
438 4e21_A 6-phosphogluconate dehy 36.0 66 0.0022 30.4 6.6 89 218-316 23-113 (358)
439 2cvz_A Dehydrogenase, 3-hydrox 34.4 1E+02 0.0034 27.3 7.4 85 219-317 3-89 (289)
440 2g1u_A Hypothetical protein TM 33.7 19 0.00066 29.1 2.2 93 218-319 20-119 (155)
441 2aef_A Calcium-gated potassium 32.8 55 0.0019 28.3 5.2 94 218-321 10-108 (234)
442 4eso_A Putative oxidoreductase 32.5 2.5E+02 0.0084 24.3 10.3 101 218-321 9-141 (255)
443 3qha_A Putative oxidoreductase 32.1 47 0.0016 30.1 4.8 86 218-316 16-103 (296)
444 2h78_A Hibadh, 3-hydroxyisobut 31.2 75 0.0026 28.6 6.0 86 218-315 4-94 (302)
445 3av4_A DNA (cytosine-5)-methyl 30.1 1.4E+02 0.0046 33.6 8.7 48 218-266 852-899 (1330)
446 4e12_A Diketoreductase; oxidor 29.4 64 0.0022 28.9 5.2 89 218-315 5-118 (283)
447 1bg6_A N-(1-D-carboxylethyl)-L 29.1 1.1E+02 0.0037 28.0 6.9 93 218-317 5-108 (359)
448 3ond_A Adenosylhomocysteinase; 28.7 1.2E+02 0.0041 30.1 7.3 85 218-320 266-354 (488)
449 1h2b_A Alcohol dehydrogenase; 28.2 1.5E+02 0.005 27.5 7.6 93 218-319 188-286 (359)
450 2rir_A Dipicolinate synthase, 28.2 83 0.0028 28.5 5.8 89 217-319 157-247 (300)
451 3mog_A Probable 3-hydroxybutyr 27.6 3.2E+02 0.011 26.7 10.3 89 218-316 6-118 (483)
452 3ghy_A Ketopantoate reductase 27.4 61 0.0021 29.9 4.7 95 218-320 4-106 (335)
453 1e2b_A Enzyme IIB-cellobiose; 27.4 30 0.001 26.6 2.2 53 219-287 5-57 (106)
454 3l4b_C TRKA K+ channel protien 27.3 1.1E+02 0.0038 25.9 6.2 92 220-319 3-100 (218)
455 3d4o_A Dipicolinate synthase s 27.3 88 0.003 28.3 5.7 89 217-319 155-245 (293)
456 2y0c_A BCEC, UDP-glucose dehyd 27.1 85 0.0029 30.8 5.9 96 217-316 8-126 (478)
457 2hwk_A Helicase NSP2; rossman 26.9 50 0.0017 30.6 3.8 44 279-322 205-258 (320)
458 3hn2_A 2-dehydropantoate 2-red 26.5 1.1E+02 0.0039 27.7 6.4 92 218-318 3-103 (312)
459 1lnq_A MTHK channels, potassiu 26.2 1E+02 0.0034 28.3 6.0 94 218-321 116-214 (336)
460 3iei_A Leucine carboxyl methyl 25.7 4E+02 0.014 24.6 13.1 102 218-320 92-231 (334)
461 1f0y_A HCDH, L-3-hydroxyacyl-C 25.3 3.2E+02 0.011 24.3 9.2 37 218-257 16-54 (302)
462 4ezb_A Uncharacterized conserv 25.3 1.2E+02 0.0042 27.7 6.4 86 218-316 25-119 (317)
463 1vpd_A Tartronate semialdehyde 24.9 74 0.0025 28.5 4.7 86 218-315 6-96 (299)
464 3abi_A Putative uncharacterize 24.7 17 0.0006 34.2 0.4 65 217-287 16-84 (365)
465 3i83_A 2-dehydropantoate 2-red 24.2 2.8E+02 0.0095 25.0 8.7 95 218-321 3-108 (320)
466 2dpo_A L-gulonate 3-dehydrogen 23.6 3.8E+02 0.013 24.5 9.5 87 218-316 7-121 (319)
467 2qyt_A 2-dehydropantoate 2-red 23.4 1.2E+02 0.0042 27.0 6.0 92 218-316 9-115 (317)
468 1x13_A NAD(P) transhydrogenase 23.0 20 0.00067 34.6 0.3 97 217-318 172-292 (401)
469 4dll_A 2-hydroxy-3-oxopropiona 23.0 1.2E+02 0.004 27.7 5.8 88 218-317 32-123 (320)
470 3tri_A Pyrroline-5-carboxylate 22.7 1.1E+02 0.0037 27.5 5.4 89 218-317 4-96 (280)
471 4dkj_A Cytosine-specific methy 22.6 56 0.0019 31.5 3.5 43 218-260 11-57 (403)
472 3czc_A RMPB; alpha/beta sandwi 22.4 49 0.0017 25.5 2.5 55 218-287 19-74 (110)
473 4ft4_B DNA (cytosine-5)-methyl 22.3 1.1E+02 0.0039 31.8 6.1 54 217-270 212-269 (784)
474 3ojo_A CAP5O; rossmann fold, c 21.6 2.6E+02 0.0091 26.9 8.2 90 219-317 13-128 (431)
475 1dlj_A UDP-glucose dehydrogena 21.0 79 0.0027 30.2 4.2 90 219-316 2-115 (402)
476 3gvp_A Adenosylhomocysteinase 20.9 1.4E+02 0.0048 29.1 6.0 88 218-320 221-309 (435)
477 3d1l_A Putative NADP oxidoredu 20.8 3.8E+02 0.013 23.1 8.7 87 218-316 11-100 (266)
478 3iht_A S-adenosyl-L-methionine 20.2 1.6E+02 0.0056 24.7 5.3 96 218-320 42-149 (174)
479 3tka_A Ribosomal RNA small sub 20.1 46 0.0016 31.5 2.2 22 298-319 254-275 (347)
480 3h2s_A Putative NADH-flavin re 20.1 1.7E+02 0.0057 24.4 5.8 93 219-318 2-104 (224)
No 1
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.69 E-value=2.6e-16 Score=141.73 Aligned_cols=158 Identities=18% Similarity=0.126 Sum_probs=118.0
Q ss_pred HHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeecc
Q 017377 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISR 272 (372)
Q Consensus 198 ~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~ 272 (372)
+.+.+.+...++ .+|||||||+|.++..+++.+.....++++|+++.+++.|+++ ++ .+.+...|..
T Consensus 27 ~~~~~~~~~~~~--------~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~ 98 (219)
T 3dh0_A 27 EKVLKEFGLKEG--------MTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN 98 (219)
T ss_dssp HHHHHHHTCCTT--------CEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT
T ss_pred HHHHHHhCCCCC--------CEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc
Confidence 455566665554 7999999999999999998753345799999999999988765 44 4777888888
Q ss_pred CCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEe
Q 017377 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (372)
Q Consensus 273 ~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~ 352 (372)
.+++++++||+|+++.+++|+ ++...++.++.++|+|||.++++++........+........+.+..+.+..+|+.+.
T Consensus 99 ~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 177 (219)
T 3dh0_A 99 KIPLPDNTVDFIFMAFTFHEL-SEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGR 177 (219)
T ss_dssp BCSSCSSCEEEEEEESCGGGC-SSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEE
T ss_pred cCCCCCCCeeEEEeehhhhhc-CCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEE
Confidence 899999999999999887777 6778899999999999999999987655432222222222345567777888998765
Q ss_pred ee-----cceEEEEecC
Q 017377 353 QQ-----DETFIWQKTV 364 (372)
Q Consensus 353 ~~-----~~~~iw~K~~ 364 (372)
.. ...++.+|+.
T Consensus 178 ~~~~~~~~~~~~~~k~~ 194 (219)
T 3dh0_A 178 VVEVGKYCFGVYAMIVK 194 (219)
T ss_dssp EEEETTTEEEEEEECC-
T ss_pred EEeeCCceEEEEEEecc
Confidence 43 2234666654
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.69 E-value=2.5e-17 Score=154.03 Aligned_cols=99 Identities=23% Similarity=0.292 Sum_probs=85.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccccH
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~ 297 (372)
.+|||||||+|.++..|++.+ ..|+|+|+|+.|++.|+++ .++.+...+++.+|+++++||+|+|+.++ ||. ++
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~~-~~v~~~~~~~e~~~~~~~sfD~v~~~~~~-h~~-~~ 114 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALRH-PRVTYAVAPAEDTGLPPASVDVAIAAQAM-HWF-DL 114 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCCC-TTEEEEECCTTCCCCCSSCEEEEEECSCC-TTC-CH
T ss_pred CCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhhc-CCceeehhhhhhhcccCCcccEEEEeeeh-hHh-hH
Confidence 589999999999999999875 4589999999999988653 46778888999999999999999999875 663 46
Q ss_pred HHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 298 GIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
..++.++.|+|||||.|++......
T Consensus 115 ~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 115 DRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHcCCCCEEEEEECCCC
Confidence 6799999999999999999876543
No 3
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.69 E-value=5.1e-16 Score=139.90 Aligned_cols=138 Identities=17% Similarity=0.182 Sum_probs=105.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC-CeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-PAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl-~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++.. .+.+...|...++++ ++||+|+|..+++|+ ++
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~-~~ 121 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLAG---RTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTYAFHHL-TD 121 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHTT---CEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEESCGGGS-CH
T ss_pred CeEEEeCCCCCHHHHHHHhCC---CeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECcchhcC-Ch
Confidence 789999999999999999874 469999999999999998854 566777788888888 999999999887777 45
Q ss_pred HHH--HHHHHHhcccCCeEEEEEeCCCCCCCCCC-----------c--chhhH-----HHHHHHHHHHhcCeeEEeeecc
Q 017377 297 EGI--FLIEADRLLKPGGYFVLTSPESKPRGSSS-----------S--RKNKS-----LLKVMEEFTEKICWSLIAQQDE 356 (372)
Q Consensus 297 ~~~--~L~el~rvLkPGG~lvis~p~~~~~~~~~-----------~--~e~~~-----~w~~i~~l~~~lcw~~~~~~~~ 356 (372)
+.. +|.++.++|||||.+++.++......... . ..... .-+.+..+.++.++++......
T Consensus 122 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 122 DEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN 201 (220)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc
Confidence 544 99999999999999999987654310000 0 00000 1255677889999998877765
Q ss_pred eEEE
Q 017377 357 TFIW 360 (372)
Q Consensus 357 ~~iw 360 (372)
...|
T Consensus 202 ~~~w 205 (220)
T 3hnr_A 202 HFVW 205 (220)
T ss_dssp SSEE
T ss_pred ceEE
Confidence 5544
No 4
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.67 E-value=3.6e-16 Score=144.95 Aligned_cols=112 Identities=22% Similarity=0.342 Sum_probs=93.5
Q ss_pred HHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeec
Q 017377 197 SRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFIS 271 (372)
Q Consensus 197 ~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~ 271 (372)
.+.+.+.+...++ .+|||||||+|.++..+++.+. .++++|+|+.|++.|+++ ++ ++.+...|.
T Consensus 26 ~~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~ 94 (260)
T 1vl5_A 26 LAKLMQIAALKGN--------EEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA 94 (260)
T ss_dssp HHHHHHHHTCCSC--------CEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC
T ss_pred HHHHHHHhCCCCC--------CEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH
Confidence 3456666665554 7999999999999999998753 799999999999988765 43 467778888
Q ss_pred cCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 272 RQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 272 ~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
..+|+++++||+|+|+.+++|+ +++..+|.++.|+|||||++++.++.
T Consensus 95 ~~l~~~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 95 EQMPFTDERFHIVTCRIAAHHF-PNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp -CCCSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HhCCCCCCCEEEEEEhhhhHhc-CCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 8999999999999999887777 67778999999999999999998654
No 5
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.67 E-value=2e-16 Score=142.19 Aligned_cols=98 Identities=13% Similarity=-0.068 Sum_probs=81.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-----------------CCCeEEEEeeccCCCCCC-C
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----------------GLPAMIGNFISRQLPYPS-L 279 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-----------------gl~~~~~~~d~~~lp~~~-~ 279 (372)
.+|||+|||+|..+..|++++ ..|+|+|+|+.|++.|+++ ..++.+.+.|+..+++++ +
T Consensus 24 ~~vLD~GCG~G~~~~~la~~g---~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~ 100 (203)
T 1pjz_A 24 ARVLVPLCGKSQDMSWLSGQG---YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIG 100 (203)
T ss_dssp CEEEETTTCCSHHHHHHHHHC---CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHH
T ss_pred CEEEEeCCCCcHhHHHHHHCC---CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCC
Confidence 789999999999999999885 4699999999999999876 235677888888998875 8
Q ss_pred CccEEEeccccccccc-cHHHHHHHHHhcccCCeEEEEEe
Q 017377 280 SFDMVHCAQCGIIWDK-KEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 280 sFDlV~~~~~~~~~~~-~~~~~L~el~rvLkPGG~lvis~ 318 (372)
+||+|++..++++++. +...++.++.|+|||||++++..
T Consensus 101 ~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 101 HCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp SEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred CEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999999888777753 33468999999999999855444
No 6
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.67 E-value=4.7e-16 Score=138.55 Aligned_cols=134 Identities=16% Similarity=0.117 Sum_probs=107.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccc-cc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD-KK 296 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~-~~ 296 (372)
.+|||||||+|.++..+++.+. .++++|+++.+++.|+++...+.+...+...+++++++||+|++..+++|+. ++
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 119 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGE 119 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTT
T ss_pred CeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHH
Confidence 6899999999999999998853 5899999999999999987778888888888999999999999999988885 47
Q ss_pred HHHHHHHHHhcccCCeEEEEEeCCCCCCCCC---CcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 297 EGIFLIEADRLLKPGGYFVLTSPESKPRGSS---SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 297 ~~~~L~el~rvLkPGG~lvis~p~~~~~~~~---~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
...+|.++.++|+|||+++++++........ .........+.+..+.++.+|+.+...
T Consensus 120 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 120 LPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 7789999999999999999998766541100 000111224556777788899988654
No 7
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.66 E-value=4.2e-16 Score=134.97 Aligned_cols=128 Identities=14% Similarity=0.106 Sum_probs=100.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccccH
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~ 297 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++...+.+...+ +++++++||+|+++.+++|+ ++.
T Consensus 19 ~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~-~~~ 91 (170)
T 3i9f_A 19 GVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFANSFHDM-DDK 91 (170)
T ss_dssp EEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEESCSTTC-SCH
T ss_pred CeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEccchhcc-cCH
Confidence 689999999999999999875 37999999999999999886567777665 78889999999999887777 677
Q ss_pred HHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 298 GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
..++.++.++|+|||++++.++........+........+.+..+.+ +|+.+...
T Consensus 92 ~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 92 QHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 88999999999999999999876654332222222222344555555 88877553
No 8
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.66 E-value=2e-16 Score=145.60 Aligned_cols=135 Identities=13% Similarity=0.111 Sum_probs=101.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC---CeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL---PAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl---~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.+|||||||+|.++..+++.+ ...++++|+|+.+++.|+++.. .+.+...+...+++++++||+|++..+++|+.
T Consensus 95 ~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 172 (254)
T 1xtp_A 95 SRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLT 172 (254)
T ss_dssp SEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSC
T ss_pred CEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCC
Confidence 799999999999999998875 3468999999999999998743 46677778888899899999999999888875
Q ss_pred -ccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCC---CcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 295 -KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSS---SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 295 -~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~---~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
++...+|.++.++|||||+++++++........ ........-+.+..+.++.+|+.+...
T Consensus 173 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 236 (254)
T 1xtp_A 173 DADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEA 236 (254)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEee
Confidence 345689999999999999999998643221100 000011123456667778888877543
No 9
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.65 E-value=1.5e-15 Score=141.44 Aligned_cols=118 Identities=26% Similarity=0.389 Sum_probs=97.8
Q ss_pred hhHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEE
Q 017377 193 VKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMI 266 (372)
Q Consensus 193 ~~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~ 266 (372)
.....+.+.+.+...++ .+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ ++ .+.+
T Consensus 46 ~~~~~~~l~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~ 115 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSG--------DRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTF 115 (273)
T ss_dssp HHHHHHHHHHHSCCCTT--------CEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEE
T ss_pred HHHHHHHHHHhcCCCCC--------CEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEE
Confidence 34555666666665554 799999999999999998863 36799999999999988765 44 3777
Q ss_pred EEeeccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 267 GNFISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 267 ~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
...|...+|+++++||+|++..+++|+ ++...+|.++.++|||||+++++++..
T Consensus 116 ~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 116 SYADAMDLPFEDASFDAVWALESLHHM-PDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp EECCTTSCCSCTTCEEEEEEESCTTTS-SCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred EECccccCCCCCCCccEEEEechhhhC-CCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 788888999999999999999887777 667789999999999999999998754
No 10
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.65 E-value=1.3e-15 Score=142.65 Aligned_cols=103 Identities=17% Similarity=0.148 Sum_probs=84.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcC-CceeEEEEeeCCHHHHHHHHHc----C--CCeEEEEeeccCCCCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLK-LMAVCVAVYEATGSQVQLALER----G--LPAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~-~~~~~v~gvD~s~~~v~~A~~r----g--l~~~~~~~d~~~lp~~~~sFDlV~~~~~~ 290 (372)
.+|||||||+|.++..|++.. .....|+|+|+|+.|++.|+++ + .++.+.+.|+..+|++ .||+|+++.++
T Consensus 72 ~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~l 149 (261)
T 4gek_A 72 TQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNFTL 149 (261)
T ss_dssp CEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEESCG
T ss_pred CEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeeeee
Confidence 789999999999999998863 2456899999999999999876 3 2467788888888764 59999999887
Q ss_pred cccccc-HHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 291 IIWDKK-EGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 291 ~~~~~~-~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
+++.+. ...+|++++|+|||||.|++++....
T Consensus 150 ~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 150 QFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred eecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 776433 34689999999999999999986543
No 11
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.65 E-value=2.3e-15 Score=137.46 Aligned_cols=133 Identities=19% Similarity=0.166 Sum_probs=104.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc--CCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER--GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r--gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ ...+.+...+...+++++++||+|++..+++|+ +
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~ 130 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRTG---YKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT-E 130 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS-S
T ss_pred CeEEEEcCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc-c
Confidence 689999999999999999885 4689999999999999987 345777788888999999999999999888777 7
Q ss_pred cHHHHHHHHHhcccCCeEEEEEeCCCCCCCCC---------CcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 296 KEGIFLIEADRLLKPGGYFVLTSPESKPRGSS---------SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~---------~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
++..++.++.++|+|||+++++++........ +.......-..+..+.+..+|+.+...
T Consensus 131 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 131 EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 77789999999999999999998755431110 000000112356777788999988543
No 12
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.64 E-value=1.2e-15 Score=139.13 Aligned_cols=132 Identities=15% Similarity=0.098 Sum_probs=102.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC-CeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-PAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl-~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
.+|||||||+|.++..+++.+. .++|+|+|+.+++.|+++.. .+.+...+...+ +++++||+|+|..+++|+ ++
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~-~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHI-DD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGC-SS
T ss_pred CcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhh-cC
Confidence 6899999999999999998764 58999999999999998855 567777777777 578899999999988887 67
Q ss_pred HHHHHHHHH-hcccCCeEEEEEeCCCCCC--------CCCCcc----------h--hhHHHHHHHHHHHhcCeeEEeee
Q 017377 297 EGIFLIEAD-RLLKPGGYFVLTSPESKPR--------GSSSSR----------K--NKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 297 ~~~~L~el~-rvLkPGG~lvis~p~~~~~--------~~~~~~----------e--~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
+..+|+++. |+|||||++++++++.... ...+.. . .....+.+..+.+..+|+.+...
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 788999999 9999999999999876531 000000 0 01123456777788899887554
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.64 E-value=8.9e-16 Score=141.82 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=89.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.+|||||||+|.++..+++.. ...++++|+|+.+++.|+++. ..+.+...|...+|+++++||+|++..+++|+.
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 134 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILALS 134 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSC
T ss_pred CEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcC
Confidence 799999999999999999873 357999999999999999875 457778888888999999999999998877774
Q ss_pred -ccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 295 -KKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 295 -~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
++...+|.++.++|||||.+++.++...
T Consensus 135 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 135 LENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred hHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 5566899999999999999999987543
No 14
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.64 E-value=3.3e-15 Score=139.04 Aligned_cols=131 Identities=16% Similarity=0.117 Sum_probs=102.3
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEecccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~ 290 (372)
..+|||||||+|.++..+++. ....++++|+|+.+++.|+++ +++ +.+...|...+|+++++||+|+|..++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 379999999999999999987 235799999999999988765 443 778888889999999999999999988
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHH----------HHHHHHHHhcCeeEEee
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLL----------KVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w----------~~i~~l~~~lcw~~~~~ 353 (372)
+|+ ++..++.++.++|||||+++++++...... +.......| ..+..+.++.+|+.+..
T Consensus 125 ~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~ 193 (267)
T 3kkz_A 125 YNI--GFERGLNEWRKYLKKGGYLAVSECSWFTDE--RPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVAT 193 (267)
T ss_dssp GGT--CHHHHHHHHGGGEEEEEEEEEEEEEESSSC--CCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEE
T ss_pred eec--CHHHHHHHHHHHcCCCCEEEEEEeeecCCC--ChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEE
Confidence 777 567799999999999999999987532211 111222333 34566668888887743
No 15
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.64 E-value=4.4e-15 Score=136.93 Aligned_cols=129 Identities=13% Similarity=0.118 Sum_probs=101.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++... ..++++|+|+.+++.|+++ ++. +.+...|...+|+++++||+|+|..+++
T Consensus 48 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 125 (257)
T 3f4k_A 48 AKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIY 125 (257)
T ss_dssp CEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSC
T ss_pred CeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHh
Confidence 6999999999999999998853 2799999999999988765 443 7788888899999999999999998877
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHH----------HHHHHHHHhcCeeEEe
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLL----------KVMEEFTEKICWSLIA 352 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w----------~~i~~l~~~lcw~~~~ 352 (372)
|+ +...++.++.++|||||+++++++...... +.......| ..+..+.+..+|+.+.
T Consensus 126 ~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 192 (257)
T 3f4k_A 126 NI--GFERGMNEWSKYLKKGGFIAVSEASWFTSE--RPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTA 192 (257)
T ss_dssp CC--CHHHHHHHHHTTEEEEEEEEEEEEEESSSC--CCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEE
T ss_pred hc--CHHHHHHHHHHHcCCCcEEEEEEeeccCCC--ChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEE
Confidence 76 567799999999999999999986522211 111222223 3456666888888775
No 16
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.64 E-value=1.4e-15 Score=140.13 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=95.8
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEE
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIG 267 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~ 267 (372)
....+.+.+.+...++ .+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ ++ ++.+.
T Consensus 22 ~~~~~~l~~~~~~~~~--------~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~ 91 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPG--------TRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFI 91 (256)
T ss_dssp HHHHHHHHHHTCCCTT--------CEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEE
Confidence 4556677777766555 799999999999999999873 34689999999999988765 44 37788
Q ss_pred EeeccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 268 NFISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 268 ~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
..|+..+++ +++||+|+|..+++|+ ++...+|.++.++|||||+++++++..
T Consensus 92 ~~d~~~~~~-~~~fD~V~~~~~~~~~-~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 92 HNDAAGYVA-NEKCDVAACVGATWIA-GGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp ESCCTTCCC-SSCEEEEEEESCGGGT-SSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred ECChHhCCc-CCCCCEEEECCChHhc-CCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 888888888 8899999999887776 566779999999999999999988643
No 17
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=1.1e-15 Score=142.09 Aligned_cols=115 Identities=18% Similarity=0.180 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ 273 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~ 273 (372)
..+.+.+.+.+...++ .+|||||||+|.++..+++.+ ..++|+|+|+.+++.|+++. ++.+...|...
T Consensus 20 ~~~~~~l~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~ 87 (261)
T 3ege_A 20 IRIVNAIINLLNLPKG--------SVIADIGAGTGGYSVALANQG---LFVYAVEPSIVMRQQAVVHP-QVEWFTGYAEN 87 (261)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEETCTTSHHHHHHHTTT---CEEEEECSCHHHHHSSCCCT-TEEEECCCTTS
T ss_pred HHHHHHHHHHhCCCCC--------CEEEEEcCcccHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcc-CCEEEECchhh
Confidence 3566677777765554 799999999999999999854 57999999999999887665 77888888899
Q ss_pred CCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 274 LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 274 lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
+|+++++||+|+|..+++|+ ++...+++++.++|| ||++++.++...
T Consensus 88 ~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~Lk-gG~~~~~~~~~~ 134 (261)
T 3ege_A 88 LALPDKSVDGVISILAIHHF-SHLEKSFQEMQRIIR-DGTIVLLTFDIR 134 (261)
T ss_dssp CCSCTTCBSEEEEESCGGGC-SSHHHHHHHHHHHBC-SSCEEEEEECGG
T ss_pred CCCCCCCEeEEEEcchHhhc-cCHHHHHHHHHHHhC-CcEEEEEEcCCc
Confidence 99999999999999987777 788889999999999 998888887643
No 18
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.63 E-value=1.4e-15 Score=143.57 Aligned_cols=119 Identities=21% Similarity=0.250 Sum_probs=98.0
Q ss_pred hhHHHHHHHHHH----ccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--
Q 017377 193 VKDYSRQIAEMI----GLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-- 262 (372)
Q Consensus 193 ~~~~~~~l~~~l----~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-- 262 (372)
.....+.+.+.+ ...++ .+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ ++
T Consensus 63 ~~~~~~~l~~~l~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~ 132 (297)
T 2o57_A 63 SLRTDEWLASELAMTGVLQRQ--------AKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLAD 132 (297)
T ss_dssp HHHHHHHHHHHHHHTTCCCTT--------CEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHhhhccCCCCC--------CEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCc
Confidence 345566677776 44444 799999999999999999872 24799999999999988765 44
Q ss_pred CeEEEEeeccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 263 PAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 263 ~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
.+.+...|...+|+++++||+|++..+++|+ .++..+|.++.++|||||+++++++...
T Consensus 133 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 191 (297)
T 2o57_A 133 NITVKYGSFLEIPCEDNSYDFIWSQDAFLHS-PDKLKVFQECARVLKPRGVMAITDPMKE 191 (297)
T ss_dssp TEEEEECCTTSCSSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred ceEEEEcCcccCCCCCCCEeEEEecchhhhc-CCHHHHHHHHHHHcCCCeEEEEEEeccC
Confidence 4777888889999999999999999998888 5677899999999999999999987543
No 19
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.63 E-value=5.8e-15 Score=133.14 Aligned_cols=161 Identities=15% Similarity=0.076 Sum_probs=109.9
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC----C------Ce
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----L------PA 264 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg----l------~~ 264 (372)
...+.+.+.+....+ .+|||||||+|.++..+++.+. ...++++|+|+.+++.|+++. + .+
T Consensus 16 ~~~~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v 86 (219)
T 3jwg_A 16 QRLGTVVAVLKSVNA--------KKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRI 86 (219)
T ss_dssp HHHHHHHHHHHHTTC--------CEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTE
T ss_pred HHHHHHHHHHhhcCC--------CEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcce
Confidence 344555555554443 7999999999999999998753 357999999999999998762 2 56
Q ss_pred EEEEeeccCCCCCCCCccEEEecccccccccc-HHHHHHHHHhcccCCeEEEEEeCCCCCCCCC---Cc-----ch----
Q 017377 265 MIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK-EGIFLIEADRLLKPGGYFVLTSPESKPRGSS---SS-----RK---- 331 (372)
Q Consensus 265 ~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~-~~~~L~el~rvLkPGG~lvis~p~~~~~~~~---~~-----~e---- 331 (372)
.+...|...+++++++||+|+|..+++|+.++ ...+++++.++|||||.++.+ ++....... +. ..
T Consensus 87 ~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 3jwg_A 87 SLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST-PNKEYNFHYGNLFEGNLRHRDHRFE 165 (219)
T ss_dssp EEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE-EBGGGGGCCCCT-----GGGCCTTS
T ss_pred EEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc-cchhhhhhhcccCcccccccCceee
Confidence 77777777788888999999999998888432 257999999999999965544 433220000 00 00
Q ss_pred -hhHHH-HHHHHHHHhcCeeEEeee-----------cceEEEEecCC
Q 017377 332 -NKSLL-KVMEEFTEKICWSLIAQQ-----------DETFIWQKTVD 365 (372)
Q Consensus 332 -~~~~w-~~i~~l~~~lcw~~~~~~-----------~~~~iw~K~~~ 365 (372)
....+ .-++.+++..++++.... .+++++.|...
T Consensus 166 ~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~~~~~g~~~qi~~~~~~~~ 212 (219)
T 3jwg_A 166 WTRKEFQTWAVKVAEKYGYSVRFLQIGEIDDEFGSPTQMGVFTLGAG 212 (219)
T ss_dssp BCHHHHHHHHHHHHHHHTEEEEEEEESCCCTTSCCSEEEEEEEECC-
T ss_pred ecHHHHHHHHHHHHHHCCcEEEEEecCCccccCCCCeEEEEEeccCC
Confidence 01111 112366677888887652 34678888764
No 20
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.63 E-value=1.8e-15 Score=139.49 Aligned_cols=100 Identities=15% Similarity=0.123 Sum_probs=88.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC--CCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG--LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg--l~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|||||||+|.++..+++.+.. .++++|+|+.+++.|+++. ..+.+...|...+++++++||+|+|..+++|+ +
T Consensus 46 ~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~ 122 (253)
T 3g5l_A 46 KTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI-A 122 (253)
T ss_dssp CEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC-S
T ss_pred CEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh-h
Confidence 79999999999999999998642 6899999999999999874 45778888888999999999999999887777 7
Q ss_pred cHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 296 KEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+...+|+++.++|||||.++++.+.
T Consensus 123 ~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 123 SFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 7888999999999999999998654
No 21
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.63 E-value=3.5e-15 Score=133.49 Aligned_cols=101 Identities=18% Similarity=0.254 Sum_probs=88.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++. ....++++|+++.+++.|+++ ++ .+.+...|...+++++++||+|+++.+++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~ 122 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVF 122 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGG
T ss_pred CEEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHh
Confidence 38999999999999999987 347899999999999998876 43 47778888889999999999999998877
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
|+ +++..+|.++.++|+|||.++++++..
T Consensus 123 ~~-~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 123 FW-EDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp GC-SCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred hc-cCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 77 778889999999999999999987654
No 22
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.62 E-value=4.3e-15 Score=136.28 Aligned_cols=112 Identities=22% Similarity=0.317 Sum_probs=94.2
Q ss_pred HHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeecc
Q 017377 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISR 272 (372)
Q Consensus 198 ~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~ 272 (372)
..+.+.+...++ .+|||||||+|.++..+++.+. .++++|+++.+++.|+++ ++ ++.+...+..
T Consensus 11 ~~~~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~ 79 (239)
T 1xxl_A 11 GLMIKTAECRAE--------HRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE 79 (239)
T ss_dssp HHHHHHHTCCTT--------CEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT
T ss_pred chHHHHhCcCCC--------CEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc
Confidence 345556666555 7999999999999999998753 689999999999988765 43 4677778888
Q ss_pred CCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 273 ~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.+|+++++||+|+|..+++|+ .++..+|.++.++|||||++++.++..
T Consensus 80 ~~~~~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 80 SLPFPDDSFDIITCRYAAHHF-SDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp BCCSCTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred cCCCCCCcEEEEEECCchhhc-cCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 899999999999999888887 677889999999999999999987654
No 23
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.61 E-value=4.7e-15 Score=132.81 Aligned_cols=100 Identities=27% Similarity=0.334 Sum_probs=87.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccccH
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~ 297 (372)
.+|||||||+|.++..+ +. ..++++|+|+.+++.|+++...+.+...+...+|+++++||+|++..+++|+ +++
T Consensus 38 ~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~ 111 (211)
T 2gs9_A 38 ESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFV-EDV 111 (211)
T ss_dssp SEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTC-SCH
T ss_pred CeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhc-CCH
Confidence 78999999999998887 22 2689999999999999988656677777888899999999999999887777 677
Q ss_pred HHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 298 GIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
..++.++.++|||||.+++++++...
T Consensus 112 ~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 112 ERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred HHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 88999999999999999999987643
No 24
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.60 E-value=2.3e-15 Score=141.72 Aligned_cols=115 Identities=22% Similarity=0.283 Sum_probs=92.8
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---------CCe
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPA 264 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---------l~~ 264 (372)
..+.+.+.+.+...++ .+|||||||+|.++..+++.+. .++|+|+|+.|++.|+++. ..+
T Consensus 43 ~~~~~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~ 111 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGC--------HRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKW 111 (293)
T ss_dssp HHHHHHHHHHHHHTTC--------CEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTC
T ss_pred HHHHHHHHHHhcccCC--------CEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhccccccccee
Confidence 4455566666654444 7899999999999999999864 6999999999999997642 235
Q ss_pred EEEEeeccCCC---CCCCCccEEEec-ccccccccc-------HHHHHHHHHhcccCCeEEEEEeCC
Q 017377 265 MIGNFISRQLP---YPSLSFDMVHCA-QCGIIWDKK-------EGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 265 ~~~~~d~~~lp---~~~~sFDlV~~~-~~~~~~~~~-------~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.+...+...++ +++++||+|+|. .+++|+ .+ ...+|.++.++|||||+++++.++
T Consensus 112 ~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 112 VIEEANWLTLDKDVPAGDGFDAVICLGNSFAHL-PDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEECCGGGHHHHSCCTTCEEEEEECTTCGGGS-CCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eEeecChhhCccccccCCCeEEEEEcChHHhhc-CccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 56667777777 888999999998 777777 44 668999999999999999999875
No 25
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.60 E-value=5.1e-15 Score=138.77 Aligned_cols=111 Identities=16% Similarity=0.190 Sum_probs=92.5
Q ss_pred HHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCC
Q 017377 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPS 278 (372)
Q Consensus 199 ~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~ 278 (372)
.+.+.+...++ .+|||||||+|.++..+++.+ ..++++|+|+.|++.|+++..++.+...|...+|+ +
T Consensus 48 ~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~ 115 (279)
T 3ccf_A 48 DLLQLLNPQPG--------EFILDLGCGTGQLTEKIAQSG---AEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-D 115 (279)
T ss_dssp HHHHHHCCCTT--------CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-S
T ss_pred HHHHHhCCCCC--------CEEEEecCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-C
Confidence 45555655444 789999999999999999843 57999999999999999886556677778888887 5
Q ss_pred CCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 279 LSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 279 ~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
++||+|+++.+++++ .++..+|.++.++|||||++++..+...
T Consensus 116 ~~fD~v~~~~~l~~~-~d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWV-KEPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp SCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CCcCEEEEcchhhhC-cCHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 899999999886665 6788899999999999999999987653
No 26
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.60 E-value=1.4e-14 Score=138.20 Aligned_cols=134 Identities=14% Similarity=0.068 Sum_probs=102.5
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEecccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~ 290 (372)
..+|||||||+|.++..+++.. ...++++|+++.+++.|+++ ++. +.+...|...+|+++++||+|++..++
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l 195 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNEST 195 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCG
T ss_pred CCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCch
Confidence 3799999999999999999872 25699999999999988865 543 778888899999999999999999887
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhH----------HHHHHHHHHHhcCeeEEeee
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKS----------LLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~----------~w~~i~~l~~~lcw~~~~~~ 354 (372)
+|+ + ...+|.++.++|||||++++.++............... ..+.+..+.++.+++.+...
T Consensus 196 ~~~-~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 196 MYV-D-LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp GGS-C-HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEE
T ss_pred hhC-C-HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 777 3 77899999999999999999987554422110000000 12445666788888877544
No 27
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.60 E-value=4e-15 Score=136.34 Aligned_cols=131 Identities=15% Similarity=0.135 Sum_probs=98.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC--CCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL--PYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l--p~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|||||||+|.++..+++.+. .++++|+|+.+++.|+++ +.+...+.... |+++++||+|+|..+++|+.+
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp SCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred CeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 7899999999999999998754 489999999999999987 55555566554 788999999999999888853
Q ss_pred -cHHHHHHHHHhcccCCeEEEEEeCCCCCCC------CCCcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 296 -KEGIFLIEADRLLKPGGYFVLTSPESKPRG------SSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 296 -~~~~~L~el~rvLkPGG~lvis~p~~~~~~------~~~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
+...++.++.++|||||++++++++..... ..+.......-+.+..+.++.+++.+...
T Consensus 117 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 117 ERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp GGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 346799999999999999999998765410 00000011112456677788888876443
No 28
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=6.4e-15 Score=135.83 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=87.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccccH
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~ 297 (372)
.+|||||||+|.++..+++... ...++++|+|+.+++.|+++..++.+...|...++ ++++||+|+++.+++|+ ++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~-~~~ 111 (259)
T 2p35_A 35 LNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQWV-PDH 111 (259)
T ss_dssp SSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGGS-TTH
T ss_pred CEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhhC-CCH
Confidence 7899999999999999998721 24589999999999999988666778888888888 78999999999886665 778
Q ss_pred HHHHHHHHhcccCCeEEEEEeCCC
Q 017377 298 GIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
..+|.++.++|+|||+++++.+..
T Consensus 112 ~~~l~~~~~~L~pgG~l~~~~~~~ 135 (259)
T 2p35_A 112 LAVLSQLMDQLESGGVLAVQMPDN 135 (259)
T ss_dssp HHHHHHHGGGEEEEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCC
Confidence 889999999999999999998754
No 29
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.60 E-value=5.1e-15 Score=137.47 Aligned_cols=100 Identities=23% Similarity=0.355 Sum_probs=88.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccccH
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~ 297 (372)
.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++.... +...+...+|+++++||+|++..+++|+.+++
T Consensus 56 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~ 131 (260)
T 2avn_A 56 CRVLDLGGGTGKWSLFLQERG---FEVVLVDPSKEMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYVENK 131 (260)
T ss_dssp CEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHCSCH
T ss_pred CeEEEeCCCcCHHHHHHHHcC---CeEEEEeCCHHHHHHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhccccH
Confidence 689999999999999999875 46999999999999999886533 66678888999999999999988788887778
Q ss_pred HHHHHHHHhcccCCeEEEEEeCCC
Q 017377 298 GIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
..+|.++.++|||||.++++.++.
T Consensus 132 ~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 132 DKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred HHHHHHHHHHcCCCeEEEEEeCCh
Confidence 889999999999999999998854
No 30
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.59 E-value=8e-15 Score=131.35 Aligned_cols=101 Identities=18% Similarity=0.175 Sum_probs=87.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC-CCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG-LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg-l~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|++.+ .++.+...|...+ +++++||+|+++.+++|+.+.
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~ 123 (218)
T 3ou2_A 48 GDVLELASGTGYWTRHLSGLA---DRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDD 123 (218)
T ss_dssp SEEEEESCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHH
T ss_pred CeEEEECCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEechhhcCCHH
Confidence 689999999999999999884 46899999999999999877 4577777888777 788999999999988887433
Q ss_pred -HHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 297 -EGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 297 -~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
...+|.++.++|+|||.+++++++..
T Consensus 124 ~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 124 RFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 26799999999999999999987653
No 31
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.59 E-value=1e-14 Score=133.09 Aligned_cols=111 Identities=20% Similarity=0.248 Sum_probs=92.8
Q ss_pred HHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC--CeEEEEeeccCCCC
Q 017377 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL--PAMIGNFISRQLPY 276 (372)
Q Consensus 199 ~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl--~~~~~~~d~~~lp~ 276 (372)
.+.+.+...++ .+|||||||+|.++..+++.+. ..++++|+|+.+++.|+++.. .+.+...+...+++
T Consensus 34 ~l~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~ 103 (243)
T 3bkw_A 34 ALRAMLPEVGG--------LRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHL 103 (243)
T ss_dssp HHHHHSCCCTT--------CEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCC
T ss_pred HHHHhccccCC--------CEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccC
Confidence 45555554444 7899999999999999998853 268999999999999998753 36677778888888
Q ss_pred CCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 277 PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 277 ~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
++++||+|++..+++|+ ++...+|.++.++|+|||++++++++
T Consensus 104 ~~~~fD~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 104 PQDSFDLAYSSLALHYV-EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp CTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCCceEEEEecccccc-chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 88999999999887776 67788999999999999999998864
No 32
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.59 E-value=6e-15 Score=137.37 Aligned_cols=98 Identities=11% Similarity=-0.019 Sum_probs=82.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC----------------------CCeEEEEeeccCCC
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----------------------LPAMIGNFISRQLP 275 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg----------------------l~~~~~~~d~~~lp 275 (372)
.+|||+|||+|..+..|+++|. .|+|+|+|+.|++.|+++. .++.+.+.|+..++
T Consensus 70 ~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 70 LRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 6899999999999999999864 6999999999999997542 35678888888888
Q ss_pred CCC-CCccEEEeccccccccc-cHHHHHHHHHhcccCCeEEEEEe
Q 017377 276 YPS-LSFDMVHCAQCGIIWDK-KEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 276 ~~~-~sFDlV~~~~~~~~~~~-~~~~~L~el~rvLkPGG~lvis~ 318 (372)
+++ ++||+|++..++.++++ +...++.++.++|||||++++.+
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 764 89999999888777753 34579999999999999997654
No 33
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.59 E-value=9.2e-15 Score=131.39 Aligned_cols=100 Identities=19% Similarity=0.250 Sum_probs=85.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC---CeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL---PAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl---~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++.. ++.+...|...++ ++++||+|+|+.+++|+.
T Consensus 53 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~ 128 (216)
T 3ofk_A 53 SNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYLE 128 (216)
T ss_dssp EEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSS
T ss_pred CcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCC
Confidence 789999999999999999874 579999999999999998742 4677778888887 689999999999888774
Q ss_pred ccH--HHHHHHHHhcccCCeEEEEEeCCC
Q 017377 295 KKE--GIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 295 ~~~--~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+.. ..++.++.++|||||+++++++..
T Consensus 129 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 129 DMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp SHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 222 468999999999999999988754
No 34
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.59 E-value=1.1e-14 Score=131.15 Aligned_cols=115 Identities=16% Similarity=0.112 Sum_probs=89.9
Q ss_pred HHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC------CeE
Q 017377 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL------PAM 265 (372)
Q Consensus 196 ~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl------~~~ 265 (372)
..+.+.+.+....+ .+|||||||+|.++..+++.+. ...++++|+++.+++.|+++ ++ .+.
T Consensus 17 ~~~~l~~~l~~~~~--------~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~ 87 (217)
T 3jwh_A 17 RMNGVVAALKQSNA--------RRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQ 87 (217)
T ss_dssp HHHHHHHHHHHTTC--------CEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEE
T ss_pred HHHHHHHHHHhcCC--------CEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceE
Confidence 34455555554444 7999999999999999998753 25799999999999999876 22 466
Q ss_pred EEEeeccCCCCCCCCccEEEecccccccccc-HHHHHHHHHhcccCCeEEEEEeC
Q 017377 266 IGNFISRQLPYPSLSFDMVHCAQCGIIWDKK-EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 266 ~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~-~~~~L~el~rvLkPGG~lvis~p 319 (372)
+...|....++++++||+|+|+.+++|+.+. ...+++++.++|||||.++++..
T Consensus 88 ~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 88 LIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp EEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred EEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 7777777777777899999999998887432 25799999999999997766544
No 35
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.59 E-value=9.5e-15 Score=134.81 Aligned_cols=96 Identities=21% Similarity=0.247 Sum_probs=85.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++ ..++.+...|...+|+++++||+|++..+++++
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 117 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLV 117 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhhc
Confidence 789999999999999999874 4699999999999999887 345778888888899999999999999886665
Q ss_pred cccHHHHHHHHHhcccCCeEEEEE
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis 317 (372)
++...++.++.++|+|||.+++.
T Consensus 118 -~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 118 -PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp -TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CCHHHHHHHHHHHCCCCcEEEEE
Confidence 67788999999999999999998
No 36
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.59 E-value=5.3e-15 Score=145.65 Aligned_cols=135 Identities=19% Similarity=0.170 Sum_probs=102.3
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc---------C----CCeEEEEeeccCC------CC
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---------G----LPAMIGNFISRQL------PY 276 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r---------g----l~~~~~~~d~~~l------p~ 276 (372)
...+|||||||+|.++..+++.......++++|+|+.+++.|+++ | .++.+...|...+ |+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 347899999999999999988632335799999999999999876 4 4677888888777 89
Q ss_pred CCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhh----------HHHHHHHHHHHhc
Q 017377 277 PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNK----------SLLKVMEEFTEKI 346 (372)
Q Consensus 277 ~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~----------~~w~~i~~l~~~l 346 (372)
++++||+|+++.+++++ +++..+|.++.++|||||+++++++.............. ..++.+..+.++.
T Consensus 163 ~~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 163 PDSSVDIVISNCVCNLS-TNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CTTCEEEEEEESCGGGC-SCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCEEEEEEccchhcC-CCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 99999999999886666 678889999999999999999998655431110000000 1125566777888
Q ss_pred CeeEE
Q 017377 347 CWSLI 351 (372)
Q Consensus 347 cw~~~ 351 (372)
+|+.+
T Consensus 242 GF~~v 246 (383)
T 4fsd_A 242 GFRDV 246 (383)
T ss_dssp TCCCE
T ss_pred CCceE
Confidence 88755
No 37
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.59 E-value=1e-15 Score=151.91 Aligned_cols=150 Identities=15% Similarity=0.140 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEE---Ee
Q 017377 193 VKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIG---NF 269 (372)
Q Consensus 193 ~~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~---~~ 269 (372)
...+.+.+.+.+...++ .+|||||||+|.++..+++.+. .++|+|+|+.+++.|++++++.... ..
T Consensus 92 ~~~~~~~l~~~~~~~~~--------~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~ 160 (416)
T 4e2x_A 92 FAMLARDFLATELTGPD--------PFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDFFEKA 160 (416)
T ss_dssp HHHHHHHHHHTTTCSSS--------CEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSCCSHH
T ss_pred HHHHHHHHHHHhCCCCC--------CEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceeeechh
Confidence 34445555555544443 7999999999999999998864 6899999999999999997765432 22
Q ss_pred eccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCCC-------CCCCCcchhhHHHHHHHHH
Q 017377 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKP-------RGSSSSRKNKSLLKVMEEF 342 (372)
Q Consensus 270 d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~-------~~~~~~~e~~~~w~~i~~l 342 (372)
+...+|+++++||+|++..+++|+ +++..+|+++.++|||||++++..++... ....+........+.+..+
T Consensus 161 ~~~~l~~~~~~fD~I~~~~vl~h~-~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~l 239 (416)
T 4e2x_A 161 TADDVRRTEGPANVIYAANTLCHI-PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGM 239 (416)
T ss_dssp HHHHHHHHHCCEEEEEEESCGGGC-TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHH
T ss_pred hHhhcccCCCCEEEEEECChHHhc-CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHH
Confidence 344567778999999999998888 68888999999999999999999875211 0000000111223456777
Q ss_pred HHhcCeeEEeee
Q 017377 343 TEKICWSLIAQQ 354 (372)
Q Consensus 343 ~~~lcw~~~~~~ 354 (372)
.++.+++.+...
T Consensus 240 l~~aGf~~~~~~ 251 (416)
T 4e2x_A 240 AQRCGFELVDVQ 251 (416)
T ss_dssp HHHTTEEEEEEE
T ss_pred HHHcCCEEEEEE
Confidence 788899887543
No 38
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.58 E-value=2.6e-14 Score=130.33 Aligned_cols=130 Identities=17% Similarity=0.064 Sum_probs=99.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC------CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL------PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl------~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++.. .+.+...|...++ ++++||+|+++.+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPE---RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTT---EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 589999999999999998753 569999999999999988732 2677777887776 456999999998877
Q ss_pred ccc-ccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEee
Q 017377 292 IWD-KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 292 ~~~-~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
++. ++...++.++.++|+|||++++...........+... ...+.+..+.+..+|+.+..
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~Gf~~~~~ 204 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYK--VDVSTFEEVLVPIGFKAVSV 204 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCC--CCHHHHHHHHGGGTEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCcc--CCHHHHHHHHHHcCCeEEEE
Confidence 774 2667899999999999999999887654422211111 12345667778889988754
No 39
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.58 E-value=7.1e-15 Score=131.80 Aligned_cols=131 Identities=21% Similarity=0.279 Sum_probs=98.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-CCCeEEEEeeccCCCCCCCCccEEEecccccccc-c
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD-K 295 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~-~ 295 (372)
.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++ ++.+. ..+...++ ++++||+|+|+.+++|+. +
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~--~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 45 AKILELGCGAGYQAEAMLAAG---FDVDATDGSPELAAEASRRLGRPVR--TMLFHQLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp CEEEESSCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHTSCCE--ECCGGGCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CcEEEECCCCCHHHHHHHHcC---CeEEEECCCHHHHHHHHHhcCCceE--EeeeccCC-CCCcEEEEEecCchhhcCHH
Confidence 689999999999999999885 4689999999999999987 55444 44667777 789999999999988875 3
Q ss_pred cHHHHHHHHHhcccCCeEEEEEeCCCCCCCC--CCcchhhHHHHHHHHHHHhcC-eeEEeee
Q 017377 296 KEGIFLIEADRLLKPGGYFVLTSPESKPRGS--SSSRKNKSLLKVMEEFTEKIC-WSLIAQQ 354 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvis~p~~~~~~~--~~~~e~~~~w~~i~~l~~~lc-w~~~~~~ 354 (372)
+...+|.++.++|||||+++++.+....... ..........+.+..+.++.+ |+.+...
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~ 180 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVE 180 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEE
Confidence 5568999999999999999999876543111 000011112345666777788 8776543
No 40
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.58 E-value=3.5e-14 Score=125.31 Aligned_cols=100 Identities=18% Similarity=0.270 Sum_probs=84.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ ++ ++.+...|...+++ +++||+|+++.+++|
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 34 GKTLDLGCGNGRNSLYLAANG---YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMF 109 (199)
T ss_dssp CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGG
T ss_pred CeEEEEcCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhh
Confidence 699999999999999999884 4699999999999988764 44 56777778888888 889999999988777
Q ss_pred cc-ccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 293 WD-KKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 293 ~~-~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+. ++...++.++.++|+|||++++.++..
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAAMD 139 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEeec
Confidence 74 366789999999999999988876533
No 41
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.58 E-value=1.2e-14 Score=136.85 Aligned_cols=102 Identities=17% Similarity=0.213 Sum_probs=87.8
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEecccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
+.+|||||||+|.++..+++.......++++|+|+.+++.|+++ +.++.+...|...++++ ++||+|++..++.|
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 101 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLLH 101 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhhc
Confidence 37999999999999999998743346799999999999988875 33567778888888884 69999999988777
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+ ++...++.++.++|||||++++.++.
T Consensus 102 ~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 102 M-TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp C-SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred C-CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 6 67778999999999999999999987
No 42
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.57 E-value=9.5e-14 Score=121.63 Aligned_cols=123 Identities=18% Similarity=0.098 Sum_probs=98.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEec-ccccccc-c
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCA-QCGIIWD-K 295 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~-~~~~~~~-~ 295 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.++++..++.+...+...+++++++||+|+++ .+++++. +
T Consensus 48 ~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~ 124 (195)
T 3cgg_A 48 AKILDAGCGQGRIGGYLSKQG---HDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAED 124 (195)
T ss_dssp CEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHH
T ss_pred CeEEEECCCCCHHHHHHHHCC---CcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcChH
Confidence 689999999999999999874 4689999999999999988766777778888888888999999998 4544543 3
Q ss_pred cHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEee
Q 017377 296 KEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
+...++.++.++|+|||.+++..+.... ...+.+..+.+..+++....
T Consensus 125 ~~~~~l~~~~~~l~~~G~l~~~~~~~~~----------~~~~~~~~~l~~~Gf~~~~~ 172 (195)
T 3cgg_A 125 GREPALANIHRALGADGRAVIGFGAGRG----------WVFGDFLEVAERVGLELENA 172 (195)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEETTSS----------CCHHHHHHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCCCCC----------cCHHHHHHHHHHcCCEEeee
Confidence 3467999999999999999998875432 11234555667778887654
No 43
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.57 E-value=1.8e-14 Score=131.08 Aligned_cols=104 Identities=16% Similarity=0.177 Sum_probs=87.5
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC---CeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL---PAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl---~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
..+|||||||+|.++..+++.. ....++++|+|+.+++.|+++.. .+.+...|...++++ ++||+|++..+++|+
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~ 122 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHHL 122 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGGS
T ss_pred CCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccccC
Confidence 3799999999999999999874 23679999999999999998733 577788888888887 899999999988887
Q ss_pred cccH-HHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 294 DKKE-GIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 294 ~~~~-~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
.+.. ..+|+++.++|||||.++++++...
T Consensus 123 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 123 EDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 4322 2599999999999999999987544
No 44
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.57 E-value=1.7e-14 Score=135.48 Aligned_cols=100 Identities=20% Similarity=0.177 Sum_probs=83.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ ++ .+.+...|...+| ++||+|++..+++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~--~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 66 MTLLDVGCGWGATMMRAVEKY--DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFE 140 (287)
T ss_dssp CEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred CEEEEECCcccHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchh
Confidence 799999999999999998542 23799999999999999876 33 4666667776665 8899999999988
Q ss_pred ccc-ccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 292 IWD-KKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 292 ~~~-~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
|+. ++...+|.++.++|||||.+++.++...
T Consensus 141 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 172 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPADGVMLLHTITGL 172 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred hcChHHHHHHHHHHHHhcCCCCEEEEEEecCC
Confidence 886 4677899999999999999999987654
No 45
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.57 E-value=1.8e-14 Score=133.62 Aligned_cols=98 Identities=22% Similarity=0.200 Sum_probs=85.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecc-cccccc--
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQ-CGIIWD-- 294 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~-~~~~~~-- 294 (372)
.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++...+.+...|+..+++ +++||+|+|.. ++.|+.
T Consensus 52 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~ 127 (263)
T 3pfg_A 52 ASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQ 127 (263)
T ss_dssp CEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHH
T ss_pred CcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCH
Confidence 689999999999999999875 36899999999999999987677888888888888 78999999997 777764
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 295 KKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 295 ~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
++...+|.++.++|||||.+++...
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEec
Confidence 3555789999999999999999754
No 46
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.57 E-value=1.1e-14 Score=136.79 Aligned_cols=99 Identities=16% Similarity=0.155 Sum_probs=86.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCC-CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLP-YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp-~~~~sFDlV~~~~~~ 290 (372)
.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++ ++ .+.+...|...++ +++++||+|+|..++
T Consensus 70 ~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 70 LRVLDAGGGEGQTAIKMAERG---HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp CEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CEEEEeCCcchHHHHHHHHCC---CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 689999999999999999884 4689999999999998876 43 3667778888887 788999999999887
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+|+ +++..+|.++.++|||||++++.+++
T Consensus 147 ~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 147 EWV-ADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp GGC-SCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred hcc-cCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 777 67788999999999999999999864
No 47
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.56 E-value=1.6e-14 Score=130.29 Aligned_cols=100 Identities=23% Similarity=0.315 Sum_probs=85.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||||||+|.++..+++.+. .++++|+++.+++.|+++ +..+.+...|...+++++++||+|+++.+++++
T Consensus 40 ~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 6899999999999999998864 699999999999988865 356777788888888888999999999773333
Q ss_pred c-ccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 294 D-KKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 294 ~-~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. .+...++.++.++|+|||.+++.+++
T Consensus 117 ~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 2 45667999999999999999999875
No 48
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.56 E-value=6.3e-14 Score=126.76 Aligned_cols=102 Identities=25% Similarity=0.323 Sum_probs=86.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC------CeEEEEeeccCCCCCCCCccEEEec
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL------PAMIGNFISRQLPYPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl------~~~~~~~d~~~lp~~~~sFDlV~~~ 287 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ ++ .+.+...+...+++++++||+|+++
T Consensus 32 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 32 DEILDIGCGSGKISLELASKG---YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp CEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CeEEEECCCCCHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 689999999999999999884 4699999999999999885 22 2467777888889999999999999
Q ss_pred cccccccccHH---HHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 288 QCGIIWDKKEG---IFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 288 ~~~~~~~~~~~---~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
.+++|+ .++. .++.++.++|+|||+++++++...+
T Consensus 109 ~~l~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (235)
T 3sm3_A 109 AFLTSV-PDPKERSRIIKEVFRVLKPGAYLYLVEFGQNW 146 (235)
T ss_dssp SCGGGC-CCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCT
T ss_pred chhhcC-CCHHHHHHHHHHHHHHcCCCeEEEEEECCcch
Confidence 887777 4444 7999999999999999999876543
No 49
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.9e-14 Score=136.38 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=84.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-------CCCeEEEEeeccCCCCCC------CCccEE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-------GLPAMIGNFISRQLPYPS------LSFDMV 284 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-------gl~~~~~~~d~~~lp~~~------~sFDlV 284 (372)
.+|||||||+|.++..+++.......++|+|+|+.+++.|+++ ..++.+...|+..+++++ ++||+|
T Consensus 38 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V 117 (299)
T 3g5t_A 38 KLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMI 117 (299)
T ss_dssp SEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEE
Confidence 7999999999999999996421346799999999999999876 346778888888888877 899999
Q ss_pred EeccccccccccHHHHHHHHHhcccCCeEEEEE
Q 017377 285 HCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 285 ~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis 317 (372)
+|+.+++|+ +...++.++.++|+|||.+++.
T Consensus 118 ~~~~~l~~~--~~~~~l~~~~~~LkpgG~l~i~ 148 (299)
T 3g5t_A 118 TAVECAHWF--DFEKFQRSAYANLRKDGTIAIW 148 (299)
T ss_dssp EEESCGGGS--CHHHHHHHHHHHEEEEEEEEEE
T ss_pred eHhhHHHHh--CHHHHHHHHHHhcCCCcEEEEE
Confidence 999886666 8888999999999999999983
No 50
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=1.4e-14 Score=129.21 Aligned_cols=102 Identities=23% Similarity=0.162 Sum_probs=84.1
Q ss_pred CeEEEeCCCCcHHH-HHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFG-AHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~-~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+|||+|||+|.++ ..++..+ ..++++|+|+.+++.|+++ +..+.+...|+..+++++++||+|++..+++|
T Consensus 25 ~~vLDiGcG~G~~~~~~~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 25 KTVLDCGAGGDLPPLSIFVEDG---YKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SEEEEESCCSSSCTHHHHHHTT---CEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CEEEEECCCCCHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 78999999999974 4444443 4699999999999988765 45566777788889998999999999988777
Q ss_pred cc-ccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 293 WD-KKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 293 ~~-~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
+. ++...++.++.++|+|||.++++++...
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 132 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFLTTK 132 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEETT
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEeccc
Confidence 74 4566899999999999999999987543
No 51
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.56 E-value=2.2e-14 Score=128.95 Aligned_cols=131 Identities=19% Similarity=0.186 Sum_probs=96.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC---CCCC-CCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL---PYPS-LSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l---p~~~-~sFDlV~~~~~~~~~ 293 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.|++++ ...+...+...+ ++.. ++||+|+|+.+++
T Consensus 54 ~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 54 ERVLDLGCGEGWLLRALADRG---IEAVGVDGDRTLVDAARAAG-AGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp SEEEEETCTTCHHHHHHHTTT---CEEEEEESCHHHHHHHHHTC-SSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CEEEEeCCCCCHHHHHHHHCC---CEEEEEcCCHHHHHHHHHhc-ccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 789999999999999999885 46899999999999999883 334444444444 5444 4599999998866
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCC-------------------CcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSS-------------------SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~-------------------~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
..+...++.++.++|+|||++++++++....... +........+.+..+.++.+|+.+...
T Consensus 128 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 207 (227)
T 3e8s_A 128 HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQ 207 (227)
T ss_dssp SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEe
Confidence 4677789999999999999999999865442110 000001124556777788899887543
No 52
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.55 E-value=2.1e-14 Score=134.02 Aligned_cols=102 Identities=21% Similarity=0.287 Sum_probs=88.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+|||||||+|.++..+++... ...++++|+++.+++.|+++ ++ ++.+...|...+++++++||+|+++.++.|
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 117 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEH 117 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGG
T ss_pred CeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhh
Confidence 7999999999999999998842 35799999999999988875 44 467777888899999999999999988777
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+ +++..++.++.++|||||++++.++..
T Consensus 118 ~-~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 118 L-QSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp C-SCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred c-CCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 7 667789999999999999999998654
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.54 E-value=3.4e-14 Score=134.81 Aligned_cols=114 Identities=17% Similarity=0.166 Sum_probs=90.5
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHc----CCC--eEEE
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALER----GLP--AMIG 267 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~ 267 (372)
...+.+.+.+...++ .+|||||||+|.++..+++. + ..++++|+|+.+++.|+++ ++. +.+.
T Consensus 59 ~~~~~~~~~~~~~~~--------~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~ 127 (302)
T 3hem_A 59 AKRKLALDKLNLEPG--------MTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVR 127 (302)
T ss_dssp HHHHHHHHTTCCCTT--------CEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEE
T ss_pred HHHHHHHHHcCCCCc--------CEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE
Confidence 344555555555444 79999999999999999987 4 5699999999999988876 443 6667
Q ss_pred EeeccCCCCCCCCccEEEeccccccccc--------cHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 268 NFISRQLPYPSLSFDMVHCAQCGIIWDK--------KEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 268 ~~d~~~lp~~~~sFDlV~~~~~~~~~~~--------~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
..|...+ +++||+|+++.+++|+.+ +...++.++.++|||||.+++.++...
T Consensus 128 ~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 128 IQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp ECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred ECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 7777665 789999999998888732 225799999999999999999987554
No 54
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.54 E-value=5.5e-14 Score=127.06 Aligned_cols=127 Identities=18% Similarity=0.190 Sum_probs=97.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccccH
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~ 297 (372)
.+|||||||+|.++..++.. +++|+++.+++.|+++ .+.+...+...+++++++||+|++..+++|+ +++
T Consensus 49 ~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~ 118 (219)
T 1vlm_A 49 GRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFV-DDP 118 (219)
T ss_dssp SCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGS-SCH
T ss_pred CcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhc-cCH
Confidence 68999999999999988754 7899999999999988 4555666778888888999999999887776 677
Q ss_pred HHHHHHHHhcccCCeEEEEEeCCCCCC-----------CCCCcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 298 GIFLIEADRLLKPGGYFVLTSPESKPR-----------GSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p~~~~~-----------~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
..+|.++.++|+|||.+++++++.... ............+.+..+.++.+++.+...
T Consensus 119 ~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 119 ERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 889999999999999999998765421 000000011123556777788898876543
No 55
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.54 E-value=8e-14 Score=122.32 Aligned_cols=101 Identities=15% Similarity=0.051 Sum_probs=75.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCC-CCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP-YPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp-~~~~sFDlV~~~~~~~ 291 (372)
.+|||+|||+|.++..+++. ...|+++|+|+.+++.|+++ ++ ++.+...+...++ +++++||+|+++...+
T Consensus 24 ~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 24 SIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp CEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 78999999999999999987 36699999999999988765 44 3555555555543 5578999999873322
Q ss_pred cc--------cccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 292 IW--------DKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 292 ~~--------~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+. ..+...++.++.++|||||.+++.....
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 138 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYG 138 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC--
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCC
Confidence 22 1334468999999999999999987643
No 56
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.54 E-value=2.3e-14 Score=127.87 Aligned_cols=102 Identities=23% Similarity=0.239 Sum_probs=85.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.+|||||||+|.++..+++.+.. .++++|+++.+++.|+++. ..+.+...|...+++++++||+|+++.++.++.
T Consensus 44 ~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~ 121 (215)
T 2pxx_A 44 DRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALL 121 (215)
T ss_dssp CCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHT
T ss_pred CeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhc
Confidence 68999999999999999988643 6899999999999998874 246677778888899899999999987665442
Q ss_pred --------------ccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 295 --------------KKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 295 --------------~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.+...++.++.++|+|||.+++.++..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 122 AGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp TTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 244679999999999999999998854
No 57
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.54 E-value=4.3e-14 Score=128.77 Aligned_cols=117 Identities=18% Similarity=0.207 Sum_probs=92.8
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEee
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFI 270 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d 270 (372)
.+.+.+.+.+..... ...+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++ +..+.+...+
T Consensus 22 ~~~~~~~~~l~~~~~------~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d 92 (246)
T 1y8c_A 22 KWSDFIIEKCVENNL------VFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQD 92 (246)
T ss_dssp HHHHHHHHHHHTTTC------CTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCC
T ss_pred HHHHHHHHHHHHhCC------CCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcCCCeEEEecc
Confidence 445556666544311 23789999999999999999885 4699999999999988876 4467777778
Q ss_pred ccCCCCCCCCccEEEecc-cccccc--ccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 271 SRQLPYPSLSFDMVHCAQ-CGIIWD--KKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 271 ~~~lp~~~~sFDlV~~~~-~~~~~~--~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
...++++ ++||+|++.. +++|+. ++...+|.++.++|+|||.++++.++.
T Consensus 93 ~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 93 ISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp GGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred cccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 8888877 8999999997 877773 455689999999999999999987653
No 58
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.54 E-value=1e-13 Score=131.89 Aligned_cols=104 Identities=17% Similarity=0.079 Sum_probs=85.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..++........++++|+|+.+++.|+++ ++. +.+...|...++++ ++||+|+++.+++
T Consensus 120 ~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~ 198 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNI 198 (305)
T ss_dssp CEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSGG
T ss_pred CEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChhh
Confidence 7899999999999999863333456799999999999999876 333 67788888899988 9999999998877
Q ss_pred cccccHH--HHHHHHHhcccCCeEEEEEeCCCC
Q 017377 292 IWDKKEG--IFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 292 ~~~~~~~--~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
|+.+... .++.++.++|||||++++++....
T Consensus 199 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 199 YEPDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp GCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 7743332 379999999999999999986543
No 59
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.54 E-value=1.1e-13 Score=130.03 Aligned_cols=100 Identities=17% Similarity=0.247 Sum_probs=84.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++ ++++.+...|...+++ +++||+|+++.+++|+
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~g---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLLG---YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CcEEEECCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 789999999999999999885 3689999999999988765 5577788888888877 7899999999887777
Q ss_pred c-ccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 294 D-KKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 294 ~-~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
. ++...++.++.++|+|||++++.....
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 4 344579999999999999988876533
No 60
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.53 E-value=3.9e-13 Score=117.59 Aligned_cols=115 Identities=17% Similarity=0.213 Sum_probs=90.6
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC---eEEE
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIG 267 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~---~~~~ 267 (372)
...+.+.+.+...++ .+|||+|||+|.++..+++. ...++++|+++.+++.|+++ +++ +.+.
T Consensus 39 ~~~~~l~~~~~~~~~--------~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~ 107 (194)
T 1dus_A 39 KGTKILVENVVVDKD--------DDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVV 107 (194)
T ss_dssp HHHHHHHHHCCCCTT--------CEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred hHHHHHHHHcccCCC--------CeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEE
Confidence 556677777765544 79999999999999999887 35799999999999988875 444 6666
Q ss_pred EeeccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 268 NFISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 268 ~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
..+... ++++++||+|+++..+++...+...++.++.++|+|||.+++..+..
T Consensus 108 ~~d~~~-~~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 108 HSDLYE-NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp ECSTTT-TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred ECchhc-ccccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 666655 45578999999987644323556679999999999999999998854
No 61
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.53 E-value=2.1e-14 Score=131.59 Aligned_cols=136 Identities=16% Similarity=0.066 Sum_probs=100.9
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC-----CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-----PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl-----~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
..+|||||||+|.++..+++.+ ...++++|+++.+++.|+++.. .+.+...+...+++++++||+|++..+++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 157 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIG 157 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhh
Confidence 3799999999999999998875 3478999999999999987742 25577778888888888999999998887
Q ss_pred ccccc-HHHHHHHHHhcccCCeEEEEEeCCCCCCCCC--CcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 292 IWDKK-EGIFLIEADRLLKPGGYFVLTSPESKPRGSS--SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 292 ~~~~~-~~~~L~el~rvLkPGG~lvis~p~~~~~~~~--~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
|+.+. ...+|.++.++|+|||+++++++........ .........+.+..+.++.+|+.+...
T Consensus 158 ~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 158 HLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred hCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 77432 3479999999999999999988644320000 000111124456667788888877543
No 62
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.53 E-value=1.3e-14 Score=137.33 Aligned_cols=104 Identities=16% Similarity=0.101 Sum_probs=77.2
Q ss_pred CCeEEEeCCCCcHHHHHH----HhcCCce-eEEEEeeCCHHHHHHHHHc-----CCC-e--EEEEeeccCCC------CC
Q 017377 217 VQSVLDVGCGFGSFGAHL----VSLKLMA-VCVAVYEATGSQVQLALER-----GLP-A--MIGNFISRQLP------YP 277 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L----~~~~~~~-~~v~gvD~s~~~v~~A~~r-----gl~-~--~~~~~d~~~lp------~~ 277 (372)
..+|||||||+|.++..+ +.+.... ..++++|+|+.|++.|+++ +++ + .+...+...++ ++
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 132 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKE 132 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTC
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccC
Confidence 368999999999876543 3332222 1359999999999988875 332 2 23344444333 67
Q ss_pred CCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 278 SLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 278 ~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+++||+|+|..+++|+ +++..+|.+++|+|||||++++..+..
T Consensus 133 ~~~fD~V~~~~~l~~~-~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 133 LQKWDFIHMIQMLYYV-KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp CCCEEEEEEESCGGGC-SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred CCceeEEEEeeeeeec-CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 8999999999987776 788889999999999999999987643
No 63
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.53 E-value=2.5e-14 Score=128.88 Aligned_cols=131 Identities=19% Similarity=0.157 Sum_probs=98.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC--CCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ--LPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~--lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|||||||+|.++..+++.+ ..++++|+++.+++.++++.. .+...+... .++++++||+|++..+++|+ .
T Consensus 34 ~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~-~ 107 (230)
T 3cc8_A 34 KEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFDCVIFGDVLEHL-F 107 (230)
T ss_dssp SEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEEEEEEESCGGGS-S
T ss_pred CcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccCEEEECChhhhc-C
Confidence 789999999999999999873 579999999999999987764 344445554 67888999999999887777 6
Q ss_pred cHHHHHHHHHhcccCCeEEEEEeCCCCCC--------CCCCc---------chhhHHHHHHHHHHHhcCeeEEeee
Q 017377 296 KEGIFLIEADRLLKPGGYFVLTSPESKPR--------GSSSS---------RKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvis~p~~~~~--------~~~~~---------~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
++..++.++.++|+|||+++++.++.... ..+.. .......+.+..+.++.+++.+...
T Consensus 108 ~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 183 (230)
T 3cc8_A 108 DPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVD 183 (230)
T ss_dssp CHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEE
Confidence 67789999999999999999998864320 00000 0011123456677788898877544
No 64
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.53 E-value=6.1e-14 Score=133.86 Aligned_cols=101 Identities=15% Similarity=0.114 Sum_probs=84.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++.. ...++++|+|+.+++.|+++ ++ .+.+...|...+| ++||+|++..+++
T Consensus 92 ~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 92 MTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp CEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred CEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHH
Confidence 789999999999999999872 24799999999999999876 43 2566667776664 7899999999888
Q ss_pred ccc-ccHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 292 IWD-KKEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 292 ~~~-~~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
|+. ++...++.++.++|||||.+++.++....
T Consensus 167 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred hcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 876 56778999999999999999999886543
No 65
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.53 E-value=6.2e-14 Score=124.63 Aligned_cols=100 Identities=16% Similarity=0.129 Sum_probs=85.0
Q ss_pred eEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 219 SVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 219 ~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ +..+.+...|...+++++++||+|+++. .|+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLG---YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLP 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCC
Confidence 89999999999999999875 4699999999999988876 5677777788888888889999999964 3443
Q ss_pred -ccHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 295 -KKEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 295 -~~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
++...++.++.++|+|||+++++++....
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 45668999999999999999999886544
No 66
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.52 E-value=8.6e-14 Score=126.50 Aligned_cols=101 Identities=22% Similarity=0.147 Sum_probs=84.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecc-cccccc--
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQ-CGIIWD-- 294 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~-~~~~~~-- 294 (372)
.+|||||||+|.++..+++.+. .++++|+|+.+++.|+++...+.+...|...+++ +++||+|+|.. +++|+.
T Consensus 42 ~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~ 117 (239)
T 3bxo_A 42 SSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTT 117 (239)
T ss_dssp CEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSH
T ss_pred CeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCH
Confidence 7899999999999999998753 6899999999999999886667777788888887 68999999755 555553
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 295 KKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 295 ~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
++...+|.++.++|+|||.++++++...
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 118 EELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 3456799999999999999999876543
No 67
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.52 E-value=4.6e-14 Score=129.16 Aligned_cols=116 Identities=18% Similarity=0.187 Sum_probs=86.9
Q ss_pred hhHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC----CCeEEEE
Q 017377 193 VKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----LPAMIGN 268 (372)
Q Consensus 193 ~~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg----l~~~~~~ 268 (372)
...+.+.+.+.+. .++ .+|||||||+|.++..+++.+. ..++++|+|+.|++.|+++. .++.+..
T Consensus 46 ~~~~~~~l~~~~~-~~~--------~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~ 114 (236)
T 1zx0_A 46 ETPYMHALAAAAS-SKG--------GRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLK 114 (236)
T ss_dssp GHHHHHHHHHHHT-TTC--------EEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEE
T ss_pred HHHHHHHHHhhcC-CCC--------CeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEe
Confidence 3455555555542 222 6899999999999999977542 47999999999999998763 4466777
Q ss_pred eeccCC--CCCCCCccEEEe-cccc-c-cc-cccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 269 FISRQL--PYPSLSFDMVHC-AQCG-I-IW-DKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 269 ~d~~~l--p~~~~sFDlV~~-~~~~-~-~~-~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.+...+ |+++++||+|++ .+.+ . .+ ..+...++.++.|+|||||++++.+.
T Consensus 115 ~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 115 GLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp SCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred cCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 777777 899999999999 4442 1 11 12334679999999999999998754
No 68
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.51 E-value=8.2e-14 Score=130.35 Aligned_cols=113 Identities=9% Similarity=-0.052 Sum_probs=86.3
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL 274 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l 274 (372)
...+.+.+.+...++ .+|||||||+|.++..|++++ ..|+++|+|+.|++.|+++.... ....+...+
T Consensus 32 ~~~~~il~~l~l~~g--------~~VLDlGcGtG~~a~~La~~g---~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~ 99 (261)
T 3iv6_A 32 SDRENDIFLENIVPG--------STVAVIGASTRFLIEKALERG---ASVTVFDFSQRMCDDLAEALADR-CVTIDLLDI 99 (261)
T ss_dssp CHHHHHHHTTTCCTT--------CEEEEECTTCHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHTSSS-CCEEEECCT
T ss_pred HHHHHHHHhcCCCCc--------CEEEEEeCcchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHhc-cceeeeeec
Confidence 345566666665555 799999999999999999885 46999999999999999874332 122233333
Q ss_pred CC-----CCCCccEEEecccccccc-ccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 275 PY-----PSLSFDMVHCAQCGIIWD-KKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 275 p~-----~~~sFDlV~~~~~~~~~~-~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+. .+++||+|+++.+++|+. ++...++.++.++| |||.++++.+.
T Consensus 100 ~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 100 TAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp TSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred ccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 32 257899999998888875 34557999999999 99999999764
No 69
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=4.5e-14 Score=129.82 Aligned_cols=113 Identities=18% Similarity=0.133 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEe
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNF 269 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~ 269 (372)
..+.+.+++.+.. ++ .+|||||||+|..+..+++.. ..+++++|+|+.+++.|+++ +..+.+...
T Consensus 47 ~~~m~~~a~~~~~-~G--------~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~ 115 (236)
T 3orh_A 47 TPYMHALAAAASS-KG--------GRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG 115 (236)
T ss_dssp HHHHHHHHHHHTT-TC--------EEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES
T ss_pred HHHHHHHHHhhcc-CC--------CeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEee
Confidence 4556666666543 33 689999999999999998774 35789999999999999875 334555555
Q ss_pred eccC--CCCCCCCccEEEec-----cccccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 270 ISRQ--LPYPSLSFDMVHCA-----QCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 270 d~~~--lp~~~~sFDlV~~~-----~~~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
+... .++++++||.|+.. ....|. .+...++.++.|+|||||.|++..
T Consensus 116 ~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~-~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 116 LWEDVAPTLPDGHFDGILYDTYPLSEETWHT-HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCCCBGGGTTT-HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hHHhhcccccccCCceEEEeeeecccchhhh-cchhhhhhhhhheeCCCCEEEEEe
Confidence 5433 35788999999752 333333 566789999999999999998753
No 70
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.50 E-value=1.1e-13 Score=131.14 Aligned_cols=116 Identities=19% Similarity=0.176 Sum_probs=91.8
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----C----CCeEE
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G----LPAMI 266 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----g----l~~~~ 266 (372)
...+.+.+.+.... .+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++ + .++.+
T Consensus 70 ~~~~~~~~~~~~~~---------~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~ 137 (299)
T 3g2m_A 70 SEAREFATRTGPVS---------GPVLELAAGMGRLTFPFLDLG---WEVTALELSTSVLAAFRKRLAEAPADVRDRCTL 137 (299)
T ss_dssp HHHHHHHHHHCCCC---------SCEEEETCTTTTTHHHHHTTT---CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEE
T ss_pred HHHHHHHHhhCCCC---------CcEEEEeccCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHhhcccccccceEE
Confidence 34555555554322 489999999999999999885 4589999999999999876 2 35778
Q ss_pred EEeeccCCCCCCCCccEEEeccccccccc--cHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 267 GNFISRQLPYPSLSFDMVHCAQCGIIWDK--KEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 267 ~~~d~~~lp~~~~sFDlV~~~~~~~~~~~--~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
...|...+++ +++||+|+|....+++.+ +...+|.++.++|||||+|++.+++...
T Consensus 138 ~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 195 (299)
T 3g2m_A 138 VQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEA 195 (299)
T ss_dssp EECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHH
T ss_pred EeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCcc
Confidence 8888888888 689999998755566543 3467999999999999999999887653
No 71
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.50 E-value=4.4e-14 Score=134.93 Aligned_cols=102 Identities=11% Similarity=0.057 Sum_probs=76.4
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-------eEEEEeec------cCC--CCC
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-------AMIGNFIS------RQL--PYP 277 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-------~~~~~~d~------~~l--p~~ 277 (372)
..+|||||||+|..+..++..+ ...|+|+|+|+.|++.|+++ +.. +.+...++ ..+ +++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3789999999997666666553 24699999999999999876 322 23444443 222 467
Q ss_pred CCCccEEEeccccccc-c-ccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 278 SLSFDMVHCAQCGIIW-D-KKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 278 ~~sFDlV~~~~~~~~~-~-~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+++||+|+|..++++. . ++...+|.++.++|||||+|++++++
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 7899999999875543 2 34568999999999999999999885
No 72
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.49 E-value=2.3e-13 Score=125.04 Aligned_cols=99 Identities=22% Similarity=0.293 Sum_probs=81.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||+|||+|.++..+++.+ ..++++|+|+.+++.|+++ +.++.+...|+..++++ ++||+|+|..+..++
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAERG---YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred CEEEEeCCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 789999999999999999875 4699999999999988765 55677888888888875 689999987543333
Q ss_pred -c-ccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 294 -D-KKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 294 -~-~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. ++...++.++.++|+|||.+++..++
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 2 34567999999999999999998765
No 73
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.49 E-value=2.4e-12 Score=114.84 Aligned_cols=132 Identities=17% Similarity=0.090 Sum_probs=97.3
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEe
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNF 269 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~ 269 (372)
.....+.+.+...++ .+|||||||+|.++..+++.+. ...++++|+++.+++.|+++ ++ .+.+...
T Consensus 27 ~i~~~~l~~l~~~~~--------~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 97 (204)
T 3e05_A 27 EVRAVTLSKLRLQDD--------LVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA 97 (204)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred HHHHHHHHHcCCCCC--------CEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 334456666665555 7999999999999999998853 36799999999999988875 44 3566666
Q ss_pred eccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCee
Q 017377 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWS 349 (372)
Q Consensus 270 d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~ 349 (372)
+........++||+|++..... +...++.++.++|+|||.+++..+.. ...+.+..+.++.+|+
T Consensus 98 d~~~~~~~~~~~D~i~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 98 FAPEGLDDLPDPDRVFIGGSGG----MLEEIIDAVDRRLKSEGVIVLNAVTL------------DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp CTTTTCTTSCCCSEEEESCCTT----CHHHHHHHHHHHCCTTCEEEEEECBH------------HHHHHHHHHHHHTTCE
T ss_pred ChhhhhhcCCCCCEEEECCCCc----CHHHHHHHHHHhcCCCeEEEEEeccc------------ccHHHHHHHHHHCCCc
Confidence 6644443447899999986533 56679999999999999999987632 2344455666777774
Q ss_pred EE
Q 017377 350 LI 351 (372)
Q Consensus 350 ~~ 351 (372)
..
T Consensus 162 ~~ 163 (204)
T 3e05_A 162 VE 163 (204)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 74
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.48 E-value=3.5e-13 Score=118.93 Aligned_cols=104 Identities=16% Similarity=0.125 Sum_probs=82.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCC--CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP--YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp--~~~~sFDlV~~~~~~ 290 (372)
.+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++ ++ ++.+...|+..++ +++++||+|+++...
T Consensus 46 ~~vLDlgcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~ 123 (189)
T 3p9n_A 46 LAVLDLYAGSGALGLEALSRGA--ASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPY 123 (189)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--SEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCT
T ss_pred CEEEEeCCCcCHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCC
Confidence 7899999999999998887643 4689999999999988875 44 4667777766553 457899999998663
Q ss_pred ccccccHHHHHHHHHh--cccCCeEEEEEeCCCCC
Q 017377 291 IIWDKKEGIFLIEADR--LLKPGGYFVLTSPESKP 323 (372)
Q Consensus 291 ~~~~~~~~~~L~el~r--vLkPGG~lvis~p~~~~ 323 (372)
.+..++...++.++.+ +|+|||.+++..+....
T Consensus 124 ~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~ 158 (189)
T 3p9n_A 124 NVDSADVDAILAALGTNGWTREGTVAVVERATTCA 158 (189)
T ss_dssp TSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTSC
T ss_pred CcchhhHHHHHHHHHhcCccCCCeEEEEEecCCCC
Confidence 3333566779999999 99999999998875443
No 75
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.48 E-value=2.2e-13 Score=127.85 Aligned_cols=102 Identities=23% Similarity=0.217 Sum_probs=84.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCC-CCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPY-PSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~-~~~sFDlV~~~~~~ 290 (372)
.+|||||||+|.++..+++.+. ..++++|+|+.+++.|+++ +. .+.+...|...+++ ++++||+|+|..++
T Consensus 66 ~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 143 (298)
T 1ri5_A 66 DSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSF 143 (298)
T ss_dssp CEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCG
T ss_pred CeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchh
Confidence 7899999999999999888742 4689999999999998876 22 35677778888888 68899999999886
Q ss_pred ccc---cccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 291 IIW---DKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 291 ~~~---~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
++. .++...+|.++.++|+|||++++++++.
T Consensus 144 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 144 HYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp GGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 552 2556689999999999999999998763
No 76
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.47 E-value=4.8e-13 Score=115.98 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=83.5
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEEe
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNF 269 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-~~~~~~ 269 (372)
.....+.+.+...++ .+|||+|||+|.++..+++.. ....++++|+++.+++.|+++ +++ ......
T Consensus 12 ~~~~~~~~~~~~~~~--------~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~ 82 (178)
T 3hm2_A 12 HVRALAISALAPKPH--------ETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRIAVQQ 82 (178)
T ss_dssp HHHHHHHHHHCCCTT--------EEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEEC
T ss_pred HHHHHHHHHhcccCC--------CeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEec
Confidence 344556666665554 789999999999999998874 347799999999999998875 444 224444
Q ss_pred ec-cCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 270 IS-RQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 270 d~-~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+. ..++..+++||+|+++.++.+ ..++.++.++|+|||++++.+..
T Consensus 83 d~~~~~~~~~~~~D~i~~~~~~~~-----~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 83 GAPRAFDDVPDNPDVIFIGGGLTA-----PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp CTTGGGGGCCSCCSEEEECC-TTC-----TTHHHHHHHTCCTTCEEEEEECS
T ss_pred chHhhhhccCCCCCEEEECCcccH-----HHHHHHHHHhcCCCCEEEEEeec
Confidence 44 233333389999999877554 45899999999999999998764
No 77
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.46 E-value=9.4e-14 Score=130.88 Aligned_cols=134 Identities=14% Similarity=0.066 Sum_probs=87.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCC----------------------------------
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLP---------------------------------- 263 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~---------------------------------- 263 (372)
.+|||||||+|.+...++.. ....|+|+|+|+.|++.|+++-..
T Consensus 73 ~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 73 RTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp SEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 78999999999954433332 224799999999999988763100
Q ss_pred -eEEEEeeccC-CCC-----CCCCccEEEecccccccc---ccHHHHHHHHHhcccCCeEEEEEeCCCCCC---CCCCcc
Q 017377 264 -AMIGNFISRQ-LPY-----PSLSFDMVHCAQCGIIWD---KKEGIFLIEADRLLKPGGYFVLTSPESKPR---GSSSSR 330 (372)
Q Consensus 264 -~~~~~~d~~~-lp~-----~~~sFDlV~~~~~~~~~~---~~~~~~L~el~rvLkPGG~lvis~p~~~~~---~~~~~~ 330 (372)
..+...|+.. +|+ ++++||+|+|+.++++.. ++...+|.++.|+|||||+|+++....... ......
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~~ 230 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLT 230 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeeee
Confidence 2233446665 554 456799999998876643 456789999999999999999985322110 000000
Q ss_pred hhhHHHHHHHHHHHhcCeeEEee
Q 017377 331 KNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 331 e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
.....-+.+..+.+..+|+.+..
T Consensus 231 ~~~~~~~~l~~~l~~aGf~~~~~ 253 (289)
T 2g72_A 231 VVPVSEEEVREALVRSGYKVRDL 253 (289)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEE
T ss_pred eccCCHHHHHHHHHHcCCeEEEe
Confidence 00111344566667788877643
No 78
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.46 E-value=6.1e-14 Score=130.80 Aligned_cols=134 Identities=14% Similarity=0.035 Sum_probs=90.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc------CCC----------------------------
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER------GLP---------------------------- 263 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r------gl~---------------------------- 263 (372)
.+|||||||+|.++..++..+. ..|+|+|+|+.|++.|+++ +++
T Consensus 57 ~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (263)
T 2a14_A 57 DTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAA 134 (263)
T ss_dssp EEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred ceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhh
Confidence 6899999999988877776653 4699999999999988763 110
Q ss_pred eE-EEEeeccC-CCC---CCCCccEEEecccccccc---ccHHHHHHHHHhcccCCeEEEEEeCCCCCC---CCCCcchh
Q 017377 264 AM-IGNFISRQ-LPY---PSLSFDMVHCAQCGIIWD---KKEGIFLIEADRLLKPGGYFVLTSPESKPR---GSSSSRKN 332 (372)
Q Consensus 264 ~~-~~~~d~~~-lp~---~~~sFDlV~~~~~~~~~~---~~~~~~L~el~rvLkPGG~lvis~p~~~~~---~~~~~~e~ 332 (372)
+. +...|... .|+ ..++||+|+++.+++|.. ++...+|.++.++|||||+|++++...... ........
T Consensus 135 i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 135 VKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEECC
T ss_pred hheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEeecc
Confidence 11 45556555 343 367999999999987753 344579999999999999999997543210 00000000
Q ss_pred hHHHHHHHHHHHhcCeeEEee
Q 017377 333 KSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 333 ~~~w~~i~~l~~~lcw~~~~~ 353 (372)
.-.-+.+....++.+++.+..
T Consensus 215 ~~~~~~l~~~l~~aGF~i~~~ 235 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIEQL 235 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEEEE
T ss_pred ccCHHHHHHHHHHCCCEEEEE
Confidence 011234556667778877644
No 79
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.46 E-value=4.2e-13 Score=141.34 Aligned_cols=118 Identities=14% Similarity=0.164 Sum_probs=95.1
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----------CC-C
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----------GL-P 263 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----------gl-~ 263 (372)
...+.+.+.+....+ .+|||||||+|.++..|++.+.....|+|+|+|+.|++.|+++ +. +
T Consensus 708 qRle~LLelL~~~~g--------~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~n 779 (950)
T 3htx_A 708 QRVEYALKHIRESSA--------STLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKS 779 (950)
T ss_dssp HHHHHHHHHHHHSCC--------SEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSE
T ss_pred HHHHHHHHHhcccCC--------CEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCc
Confidence 345555666654444 7999999999999999998863346799999999999999872 33 4
Q ss_pred eEEEEeeccCCCCCCCCccEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEeCCC
Q 017377 264 AMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE-GIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 264 ~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~-~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+.+...|+..+++++++||+|+|..+++|+.+.. ..++.++.++|||| .+++++|+.
T Consensus 780 VefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 780 ATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred eEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 6788889999999999999999999988885332 35899999999999 889988765
No 80
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.46 E-value=1.1e-12 Score=113.87 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=102.1
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEE
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGN 268 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~ 268 (372)
....+.+.+.+...++ .+|||+|||+|.++..+++. ...++++|+++.+++.|+++ ++ ++.+..
T Consensus 21 ~~~~~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 89 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKD--------DVVVDVGCGSGGMTVEIAKR---CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIK 89 (183)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEESCCCSHHHHHHHTT---SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHHcCCCCC--------CEEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEE
Confidence 4556667777765554 78999999999999999883 35799999999999988876 43 466666
Q ss_pred eeccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCe
Q 017377 269 FISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICW 348 (372)
Q Consensus 269 ~d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw 348 (372)
.|... ++++++||+|+++.+ .+...++.++.++ |||.+++..+.. .....+....+..+|
T Consensus 90 ~d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~------------~~~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 90 GRAED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVL------------ENAAKIINEFESRGY 149 (183)
T ss_dssp SCHHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCH------------HHHHHHHHHHHHTTC
T ss_pred CCccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEeccc------------ccHHHHHHHHHHcCC
Confidence 66665 677789999999866 4556799999999 999999998632 123344555577778
Q ss_pred eEEeeecceEEEEe
Q 017377 349 SLIAQQDETFIWQK 362 (372)
Q Consensus 349 ~~~~~~~~~~iw~K 362 (372)
++...+.....+++
T Consensus 150 ~~~~~~~~~~~~~~ 163 (183)
T 2yxd_A 150 NVDAVNVFISYAKK 163 (183)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred eEEEEEeeeehhhc
Confidence 77766544444443
No 81
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.46 E-value=4e-13 Score=122.38 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=81.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEecc-cccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQ-CGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~-~~~~ 292 (372)
.+|||||||+|.++..+++. ..++++|+|+.+++.|+++ +..+.+...+...++++ ++||+|++.. ++.|
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNY 109 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhh
Confidence 68999999999999999876 5689999999999988875 45577777788888876 8899999986 6666
Q ss_pred cc--ccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 293 WD--KKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 293 ~~--~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+. ++...++.++.++|+|||.+++..++
T Consensus 110 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 110 LQTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp CCSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 53 34557899999999999999997654
No 82
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.45 E-value=2e-13 Score=127.06 Aligned_cols=119 Identities=15% Similarity=0.116 Sum_probs=90.5
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHH------HHHHHHHc----CC--
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGS------QVQLALER----GL-- 262 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~------~v~~A~~r----gl-- 262 (372)
.....+.+.+...++ .+|||||||+|.++..+++.......++++|+|+. +++.|+++ ++
T Consensus 30 ~~~~~l~~~~~~~~~--------~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~ 101 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPG--------EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGD 101 (275)
T ss_dssp HHHHHHHHHHTCCTT--------CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGG
T ss_pred HHHHHHHHHcCCCCC--------CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCC
Confidence 445566666666555 79999999999999999987312257999999997 88888765 33
Q ss_pred CeEEEEee---ccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 263 PAMIGNFI---SRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 263 ~~~~~~~d---~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
.+.+...| ...+|+++++||+|++..+++|+ +++..++..+.++++|||++++.+....
T Consensus 102 ~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~-~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 102 RLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYF-ASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp GEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGS-SCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred ceEEEECChhhhccCCCCCCCEEEEEEccchhhC-CCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 35666666 45667888999999999988777 5555577777777788999999886553
No 83
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.45 E-value=1.6e-12 Score=116.86 Aligned_cols=108 Identities=13% Similarity=0.068 Sum_probs=84.2
Q ss_pred HHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEe
Q 017377 196 YSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNF 269 (372)
Q Consensus 196 ~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~ 269 (372)
....+.+.+...++ .+|||||||+|.++..+++. ...++++|+++.+++.|+++ +++ +.+...
T Consensus 43 ~~~~~l~~l~~~~~--------~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~ 111 (204)
T 3njr_A 43 MRALTLAALAPRRG--------ELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQG 111 (204)
T ss_dssp HHHHHHHHHCCCTT--------CEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred HHHHHHHhcCCCCC--------CEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC
Confidence 33455666666555 78999999999999999987 35699999999999988865 554 667777
Q ss_pred eccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 270 d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
|.........+||+|++..++ +.. ++.++.++|||||.++++...
T Consensus 112 d~~~~~~~~~~~D~v~~~~~~-----~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 112 TAPAALADLPLPEAVFIGGGG-----SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp CTTGGGTTSCCCSEEEECSCC-----CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred chhhhcccCCCCCEEEECCcc-----cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 766632234579999987542 455 999999999999999999774
No 84
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.45 E-value=2.6e-13 Score=126.21 Aligned_cols=97 Identities=22% Similarity=0.355 Sum_probs=83.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccccH
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~ 297 (372)
.+|||||||+|.++..+++.. ....++++|+|+.+++.|++++..+.+...+...+|+++++||+|+++.+.
T Consensus 87 ~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~------- 158 (269)
T 1p91_A 87 TAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP------- 158 (269)
T ss_dssp CEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-------
T ss_pred CEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-------
Confidence 689999999999999999873 235699999999999999998877788888888899999999999987541
Q ss_pred HHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 298 GIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
.++.++.++|||||.+++.++....
T Consensus 159 -~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 159 -CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp -CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred -hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 2589999999999999999987644
No 85
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.45 E-value=8.9e-13 Score=116.74 Aligned_cols=128 Identities=16% Similarity=0.096 Sum_probs=91.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCC-CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLP-YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp-~~~~sFDlV~~~~~~ 290 (372)
.+|||+|||+|.++..+++.......++++|+++.+++.|+++ ++ ++.+...|...++ +.+++||+|+++..+
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~ 103 (197)
T 3eey_A 24 DTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGY 103 (197)
T ss_dssp CEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESB
T ss_pred CEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCc
Confidence 6899999999999999998721224799999999999988876 43 4677777777765 667899999998654
Q ss_pred ccc--------cccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhc---CeeEEe
Q 017377 291 IIW--------DKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKI---CWSLIA 352 (372)
Q Consensus 291 ~~~--------~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~l---cw~~~~ 352 (372)
+.. ..+...++.++.++|||||++++....... ........+..+.+.+ .|....
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~v~~ 169 (197)
T 3eey_A 104 LPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGD-------TGFEEKEKVLEFLKGVDQKKFIVQR 169 (197)
T ss_dssp CTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTT-------TBSHHHHHHHHHHTTSCTTTEEEEE
T ss_pred ccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCC-------CcHHHHHHHHHHHHhCCCCcEEEEE
Confidence 221 123346999999999999999998764332 1123334455555443 365543
No 86
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.44 E-value=3.6e-13 Score=117.44 Aligned_cols=114 Identities=13% Similarity=-0.032 Sum_probs=85.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc-
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK- 296 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~- 296 (372)
.+|||+|||+|.++..+++.+ .++|+|+|+.|++. ...+.+...|... ++++++||+|+++..+++..+.
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCT
T ss_pred CeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCccc
Confidence 689999999999999999875 79999999999988 2234555566655 6777999999998664433221
Q ss_pred -------HHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEee
Q 017377 297 -------EGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 297 -------~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
...++.++.+.| |||.+++..+.... -+.+..+.+..+|+....
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~------------~~~l~~~l~~~gf~~~~~ 146 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANR------------PKEVLARLEERGYGTRIL 146 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGC------------HHHHHHHHHHTTCEEEEE
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecCCC------------HHHHHHHHHHCCCcEEEE
Confidence 246888999999 99999998764322 234556667778876644
No 87
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.44 E-value=1.8e-13 Score=126.38 Aligned_cols=136 Identities=14% Similarity=0.094 Sum_probs=95.2
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC--C-------------------------------
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL--P------------------------------- 263 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl--~------------------------------- 263 (372)
..+|||||||+|.++..++..+. ..++++|+|+.+++.|+++.. +
T Consensus 57 ~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 57 GELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp EEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 36899999999999998887753 479999999999999876521 1
Q ss_pred -e-EEEEeeccCCC-CCC---CCccEEEecccccccc---ccHHHHHHHHHhcccCCeEEEEEeCCCCCC---CCCCcch
Q 017377 264 -A-MIGNFISRQLP-YPS---LSFDMVHCAQCGIIWD---KKEGIFLIEADRLLKPGGYFVLTSPESKPR---GSSSSRK 331 (372)
Q Consensus 264 -~-~~~~~d~~~lp-~~~---~sFDlV~~~~~~~~~~---~~~~~~L~el~rvLkPGG~lvis~p~~~~~---~~~~~~e 331 (372)
+ .+...|....+ +++ ++||+|+|+.++++.. ++...+|.++.++|||||++++.++..... .......
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~ 214 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQKFSS 214 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEEC
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCccccc
Confidence 4 56666766653 355 8999999998877433 356679999999999999999988543220 0000000
Q ss_pred hhHHHHHHHHHHHhcCeeEEeee
Q 017377 332 NKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 332 ~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
....-+.+..+.+..+++.+...
T Consensus 215 ~~~~~~~~~~~l~~aGf~~~~~~ 237 (265)
T 2i62_A 215 LPLGWETVRDAVEEAGYTIEQFE 237 (265)
T ss_dssp CCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cccCHHHHHHHHHHCCCEEEEEE
Confidence 00112345666677888876544
No 88
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.44 E-value=6.8e-13 Score=120.62 Aligned_cols=88 Identities=20% Similarity=0.328 Sum_probs=77.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeec-cCCCCC-CCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-RQLPYP-SLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~-~~lp~~-~~sFDlV~~~~~~~~~~~ 295 (372)
.+|||||||+|.++..+++.+ ..++++|+|+.+++.|+++..++.+...|. ..+|++ +++||+|+++ .
T Consensus 50 ~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------~ 119 (226)
T 3m33_A 50 TRVLEAGCGHGPDAARFGPQA---ARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------R 119 (226)
T ss_dssp CEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------S
T ss_pred CeEEEeCCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------C
Confidence 789999999999999999884 469999999999999999866777887777 678888 8999999987 2
Q ss_pred cHHHHHHHHHhcccCCeEEE
Q 017377 296 KEGIFLIEADRLLKPGGYFV 315 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lv 315 (372)
+...++.++.++|||||.++
T Consensus 120 ~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp CCSGGGGGHHHHEEEEEEEE
T ss_pred CHHHHHHHHHHHcCCCcEEE
Confidence 33458999999999999999
No 89
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.43 E-value=4e-13 Score=127.25 Aligned_cols=103 Identities=17% Similarity=0.153 Sum_probs=80.0
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC-----------------------------------
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----------------------------------- 261 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg----------------------------------- 261 (372)
..+|||||||+|.++..++... ....|+|+|+++.+++.|+++.
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~-~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKW-GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHT-CCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 3789999999999999999873 2357999999999999998762
Q ss_pred ----------------------------CCeEEEEeeccCCC-----CCCCCccEEEecccccccc-----ccHHHHHHH
Q 017377 262 ----------------------------LPAMIGNFISRQLP-----YPSLSFDMVHCAQCGIIWD-----KKEGIFLIE 303 (372)
Q Consensus 262 ----------------------------l~~~~~~~d~~~lp-----~~~~sFDlV~~~~~~~~~~-----~~~~~~L~e 303 (372)
-++.+...|....+ +.+++||+|+|..++.+++ ++...+|++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 13455555554333 5678999999998764432 245579999
Q ss_pred HHhcccCCeEEEEEeCC
Q 017377 304 ADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 304 l~rvLkPGG~lvis~p~ 320 (372)
+.++|+|||+|++...+
T Consensus 206 ~~~~LkpGG~lil~~~~ 222 (292)
T 3g07_A 206 IYRHLRPGGILVLEPQP 222 (292)
T ss_dssp HHHHEEEEEEEEEECCC
T ss_pred HHHHhCCCcEEEEecCC
Confidence 99999999999998653
No 90
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.43 E-value=2.4e-12 Score=114.82 Aligned_cols=127 Identities=15% Similarity=0.104 Sum_probs=93.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEEeeccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-~~~~~~d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+|||||||+|.++..+++.+. ..++++|+++.+++.|+++ ++. +.+...|... +.+++||+|+++..+.+
T Consensus 62 ~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 62 LTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYDIALQKTSLLA--DVDGKFDLIVANILAEI 137 (205)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTT--TCCSCEEEEEEESCHHH
T ss_pred CEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccc--cCCCCceEEEECCcHHH
Confidence 7899999999999999988642 4689999999999988875 544 6666666544 45689999999865433
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEeee----cceEEEEecC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ----DETFIWQKTV 364 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~----~~~~iw~K~~ 364 (372)
...++.++.++|+|||++++++.... ..+.+..+.+..+++.+... ...++.+++.
T Consensus 138 ----~~~~l~~~~~~L~~gG~l~~~~~~~~------------~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~~~~~~ 197 (205)
T 3grz_A 138 ----LLDLIPQLDSHLNEDGQVIFSGIDYL------------QLPKIEQALAENSFQIDLKMRAGRWIGLAISRKH 197 (205)
T ss_dssp ----HHHHGGGSGGGEEEEEEEEEEEEEGG------------GHHHHHHHHHHTTEEEEEEEEETTEEEEEEEECC
T ss_pred ----HHHHHHHHHHhcCCCCEEEEEecCcc------------cHHHHHHHHHHcCCceEEeeccCCEEEEEEeccc
Confidence 35689999999999999999865432 13345566677788876543 2245555554
No 91
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.43 E-value=3.5e-13 Score=128.50 Aligned_cols=102 Identities=25% Similarity=0.346 Sum_probs=81.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC------------CCeEEEEeeccCCC----CC--CC
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG------------LPAMIGNFISRQLP----YP--SL 279 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg------------l~~~~~~~d~~~lp----~~--~~ 279 (372)
.+|||||||+|.++..+++.+ ...++++|+|+.+++.|+++. ..+.+...|...++ ++ ++
T Consensus 36 ~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 36 ITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp CEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 689999999999999998753 357999999999999888752 13567777877775 54 45
Q ss_pred CccEEEeccccccc-c--ccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 280 SFDMVHCAQCGIIW-D--KKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 280 sFDlV~~~~~~~~~-~--~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+||+|+|+.++++. . ++...+|.++.++|||||+++++.++.
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 99999999875443 1 334579999999999999999998853
No 92
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=2.1e-13 Score=124.96 Aligned_cols=102 Identities=13% Similarity=0.036 Sum_probs=83.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC--CeEEEEeeccCCCCCC-----CCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL--PAMIGNFISRQLPYPS-----LSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl--~~~~~~~d~~~lp~~~-----~sFDlV~~~~~~ 290 (372)
.+|||||||+|.++..+++.+. .++++|+|+.+++.|+++.. ++.+...|...++++. ..||+|+++.++
T Consensus 58 ~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~ 134 (245)
T 3ggd_A 58 LPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGF 134 (245)
T ss_dssp SCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSS
T ss_pred CeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcchh
Confidence 6899999999999999998864 58999999999999988743 5667777776654332 349999999887
Q ss_pred ccccc-cHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 291 IIWDK-KEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 291 ~~~~~-~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
+++.+ +...++.++.++|||||++++.++...
T Consensus 135 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 135 HHIPVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp TTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred hcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 77642 567899999999999999999887543
No 93
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.43 E-value=4e-12 Score=110.92 Aligned_cols=131 Identities=17% Similarity=0.150 Sum_probs=94.8
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEE
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIG 267 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~ 267 (372)
......+.+.+...++ .+|||+|||+|.++..+++.+ ..++++|+++.+++.|+++ ++ .+.+.
T Consensus 19 ~~~~~~~~~~~~~~~~--------~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~ 87 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKN--------DVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLM 87 (192)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEE
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEE
Confidence 3445556666665554 799999999999999999875 5799999999999988874 44 45566
Q ss_pred EeeccCCCCCC-CCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhc
Q 017377 268 NFISRQLPYPS-LSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKI 346 (372)
Q Consensus 268 ~~d~~~lp~~~-~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~l 346 (372)
..+... ++++ ++||+|++...+. +...++.++.++|+|||.+++..+.. .....+..+.++.
T Consensus 88 ~~d~~~-~~~~~~~~D~v~~~~~~~----~~~~~l~~~~~~l~~gG~l~~~~~~~------------~~~~~~~~~l~~~ 150 (192)
T 1l3i_A 88 EGDAPE-ALCKIPDIDIAVVGGSGG----ELQEILRIIKDKLKPGGRIIVTAILL------------ETKFEAMECLRDL 150 (192)
T ss_dssp ESCHHH-HHTTSCCEEEEEESCCTT----CHHHHHHHHHHTEEEEEEEEEEECBH------------HHHHHHHHHHHHT
T ss_pred ecCHHH-hcccCCCCCEEEECCchH----HHHHHHHHHHHhcCCCcEEEEEecCc------------chHHHHHHHHHHC
Confidence 665544 3333 5899999986543 34669999999999999999987632 2233445555667
Q ss_pred CeeEEe
Q 017377 347 CWSLIA 352 (372)
Q Consensus 347 cw~~~~ 352 (372)
+|+...
T Consensus 151 g~~~~~ 156 (192)
T 1l3i_A 151 GFDVNI 156 (192)
T ss_dssp TCCCEE
T ss_pred CCceEE
Confidence 764443
No 94
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.42 E-value=1.4e-12 Score=117.41 Aligned_cols=123 Identities=16% Similarity=0.156 Sum_probs=92.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCC--CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP--YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp--~~~~sFDlV~~~~~~ 290 (372)
.+|||||||+|.++..+++... ...++|+|+++.+++.|+++ ++ ++.+...|+..++ +++++||+|+++..
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~- 120 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS- 120 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC-
T ss_pred CeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC-
Confidence 6899999999999999998753 35799999999999988765 44 4667777877776 77889999999854
Q ss_pred ccccc--------cHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 291 IIWDK--------KEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 291 ~~~~~--------~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
.+|.. ....++.++.++|+|||.+++..... .....+.+..+..+|......
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~------------~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR------------GLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH------------HHHHHHHHHHHHHTCEEEEEE
T ss_pred CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH------------HHHHHHHHHHHHCCCeeeecc
Confidence 33321 12469999999999999999986521 122344445566678766543
No 95
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.42 E-value=1.3e-12 Score=123.96 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=77.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+|||||||+|.++..++.+. ....|+++|+++.|++.|+++ ++ ++.+..+|+..+| +++||+|++...
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~--- 197 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL--- 197 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT---
T ss_pred CEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC---
Confidence 899999999998775554432 246799999999999999876 55 4667777777765 789999998643
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.++...++.++.|+|||||.+++....
T Consensus 198 -~~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 198 -AEPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp -CSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred -ccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 367778999999999999999998753
No 96
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.41 E-value=3.4e-12 Score=115.70 Aligned_cols=123 Identities=20% Similarity=0.138 Sum_probs=90.5
Q ss_pred CeEEEeCCC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccC-CCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQ-LPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~-lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||+||| +|.++..++... ...++++|+++.+++.|+++ ++++.+...|... .++++++||+|+++-..+
T Consensus 57 ~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 57 EVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp CEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 789999999 999999999873 35799999999999988765 5567777766533 356678999999985433
Q ss_pred ccc------------------ccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEee
Q 017377 292 IWD------------------KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 292 ~~~------------------~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
+.. .....++.++.++|||||++++..+.. ......+....++.+|+....
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------~~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDK-----------EKLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp ---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESC-----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred CCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEeccc-----------HhHHHHHHHHHHHcCCceEEE
Confidence 321 112568999999999999999986632 123345556667778866553
No 97
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=117.30 Aligned_cols=120 Identities=22% Similarity=0.261 Sum_probs=92.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccccH
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~ 297 (372)
.+|||||||+|.++..+. ..++++|+++. .+.+...+...+|+++++||+|++..++ |+ .+.
T Consensus 69 ~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~-~~~ 130 (215)
T 2zfu_A 69 LVVADFGCGDCRLASSIR------NPVHCFDLASL----------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MG-TNI 130 (215)
T ss_dssp SCEEEETCTTCHHHHHCC------SCEEEEESSCS----------STTEEESCTTSCSCCTTCEEEEEEESCC-CS-SCH
T ss_pred CeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------CceEEEeccccCCCCCCCEeEEEEehhc-cc-cCH
Confidence 689999999999988773 35889999987 3344556777889999999999999876 55 778
Q ss_pred HHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEeeec-----ceEEEEecCC
Q 017377 298 GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQD-----ETFIWQKTVD 365 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~~-----~~~iw~K~~~ 365 (372)
..+|.++.++|+|||.++++++.... . ..+.+..+.+..+++.+.... ..++++|...
T Consensus 131 ~~~l~~~~~~L~~gG~l~i~~~~~~~-------~---~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~~ 193 (215)
T 2zfu_A 131 RDFLEEANRVLKPGGLLKVAEVSSRF-------E---DVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGP 193 (215)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECGGGC-------S---CHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEECSS
T ss_pred HHHHHHHHHhCCCCeEEEEEEcCCCC-------C---CHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEecCc
Confidence 88999999999999999999865422 1 224456666788998876542 3577888653
No 98
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.40 E-value=1.5e-12 Score=117.68 Aligned_cols=100 Identities=18% Similarity=0.201 Sum_probs=79.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCC--CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP--YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp--~~~~sFDlV~~~~~~ 290 (372)
.+|||||||+|.++..+++... ...++|+|+|+.+++.|+++ ++ ++.+...|+..++ +++++||.|++.+.
T Consensus 40 ~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~- 117 (213)
T 2fca_A 40 PIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS- 117 (213)
T ss_dssp CEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC-
T ss_pred ceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC-
Confidence 6899999999999999998742 36799999999999988765 54 4677777777766 77899999998754
Q ss_pred cccccc--------HHHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWDKK--------EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~--------~~~~L~el~rvLkPGG~lvis~p 319 (372)
.+|... ...++.++.++|+|||.+++.+.
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 233221 24689999999999999999865
No 99
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.40 E-value=1.7e-12 Score=116.15 Aligned_cols=108 Identities=22% Similarity=0.150 Sum_probs=86.8
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEEe
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNF 269 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-~~~~~~ 269 (372)
.....+.+.+...++ .+|||||||+|.++..+++.+ ..++++|+++.+++.|+++ +++ +.+...
T Consensus 64 ~~~~~~~~~l~~~~~--------~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 64 YMVARMTELLELTPQ--------SRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG 132 (210)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 345566666665554 799999999999999999873 5689999999999998875 443 667777
Q ss_pred eccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 270 d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
|....+.++++||+|++..++.++.+ ++.++|+|||+++++.+.
T Consensus 133 d~~~~~~~~~~~D~i~~~~~~~~~~~-------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 133 DGWQGWQARAPFDAIIVTAAPPEIPT-------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp CGGGCCGGGCCEEEEEESSBCSSCCT-------HHHHTEEEEEEEEEEECS
T ss_pred CcccCCccCCCccEEEEccchhhhhH-------HHHHhcccCcEEEEEEcC
Confidence 77776666789999999987666642 588999999999999886
No 100
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.40 E-value=1.2e-12 Score=118.40 Aligned_cols=96 Identities=19% Similarity=0.150 Sum_probs=71.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHH----HHHHcCCCeEEEEeeccC----CCCCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQ----LALERGLPAMIGNFISRQ----LPYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~----~A~~rgl~~~~~~~d~~~----lp~~~~sFDlV~~~~~ 289 (372)
.+|||+|||+|.++..+++... ...|+|+|+|+.|++ .|+++ .++.+...|+.. .+++ ++||+|+|+.
T Consensus 59 ~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~- 134 (210)
T 1nt2_A 59 ERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDI- 134 (210)
T ss_dssp CEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECC-
T ss_pred CEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEec-
Confidence 7899999999999999988743 357999999998654 44433 245555556554 3454 8999999972
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.. ..+...++.++.++|||||+++++.+
T Consensus 135 ~~--~~~~~~~l~~~~r~LkpgG~l~i~~~ 162 (210)
T 1nt2_A 135 AQ--KNQIEILKANAEFFLKEKGEVVIMVK 162 (210)
T ss_dssp CS--TTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cC--hhHHHHHHHHHHHHhCCCCEEEEEEe
Confidence 12 23344569999999999999999964
No 101
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.40 E-value=4.1e-12 Score=121.80 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=84.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++... ...++++|++ .+++.|+++ ++ .+.+...|....+++++ ||+|++..+++
T Consensus 167 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~~~~~l~ 243 (335)
T 2r3s_A 167 LKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVLLPNFLH 243 (335)
T ss_dssp SEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEEEESCGG
T ss_pred CEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEEEcchhc
Confidence 7999999999999999998742 3579999999 999988875 44 36777777777777655 99999999988
Q ss_pred cccc-cHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 292 IWDK-KEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 292 ~~~~-~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
++.+ +...+|+++.++|+|||++++.++....
T Consensus 244 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 244 HFDVATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred cCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 8853 3357999999999999999999876544
No 102
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.40 E-value=2.2e-12 Score=118.39 Aligned_cols=120 Identities=16% Similarity=0.147 Sum_probs=89.5
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCCCC---CCCccEEEecc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYP---SLSFDMVHCAQ 288 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp~~---~~sFDlV~~~~ 288 (372)
..+|||||||+|.++..++... ....++++|+|+.+++.|+++ ++ ++.+...++.+++++ +++||+|+|..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 3789999999999999998643 235799999999999988764 55 467777777777764 68999999975
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEe
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~ 352 (372)
. .+...++.++.++|+|||++++..... .......+....+..+++...
T Consensus 150 ~-----~~~~~~l~~~~~~LkpgG~l~~~~g~~----------~~~~~~~~~~~l~~~g~~~~~ 198 (240)
T 1xdz_A 150 V-----ARLSVLSELCLPLVKKNGLFVALKAAS----------AEEELNAGKKAITTLGGELEN 198 (240)
T ss_dssp C-----SCHHHHHHHHGGGEEEEEEEEEEECC-----------CHHHHHHHHHHHHHTTEEEEE
T ss_pred c-----CCHHHHHHHHHHhcCCCCEEEEEeCCC----------chHHHHHHHHHHHHcCCeEeE
Confidence 2 556779999999999999999874321 112234445555677776654
No 103
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.39 E-value=1.2e-12 Score=117.25 Aligned_cols=101 Identities=19% Similarity=0.140 Sum_probs=79.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC---CeEEEEeeccCCC--CCCCC-ccEEEec
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL---PAMIGNFISRQLP--YPSLS-FDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl---~~~~~~~d~~~lp--~~~~s-FDlV~~~ 287 (372)
.+|||+|||+|.++..++..+. ..|+++|+|+.+++.|+++ ++ .+.+...|+..+. +++++ ||+|+++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 6899999999999998887753 4689999999999988865 54 5667777765543 24678 9999998
Q ss_pred cccccccccHHHHHHHH--HhcccCCeEEEEEeCCCC
Q 017377 288 QCGIIWDKKEGIFLIEA--DRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el--~rvLkPGG~lvis~p~~~ 322 (372)
.. ++. .+...++.++ .++|+|||.++++.....
T Consensus 133 ~~-~~~-~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 133 PP-FHF-NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CC-SSS-CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CC-CCC-ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 65 443 4556688888 778999999999887543
No 104
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.39 E-value=3.4e-12 Score=114.90 Aligned_cols=135 Identities=19% Similarity=0.123 Sum_probs=92.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHH----HH----cCC-CeEEEEeeccCCCCCCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLA----LE----RGL-PAMIGNFISRQLPYPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A----~~----rgl-~~~~~~~d~~~lp~~~~sFDlV~~~~ 288 (372)
.+|||||||+|.++..+++.. ....++|+|+|+.|++.+ ++ .++ ++.+...|+..+|+++++ |.|+...
T Consensus 29 ~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~ 106 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLM 106 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEES
T ss_pred CEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEc
Confidence 789999999999999999874 346799999999988753 22 233 467888899999998877 8877432
Q ss_pred cc---c-cccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCC------CcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 289 CG---I-IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSS------SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 289 ~~---~-~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~------~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
.. + |+.+++..++.++.++|||||.++++.....+.... +.......-+.+....+..+|++....
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 107 PWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp CCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred cchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeee
Confidence 11 1 122444679999999999999999976433321111 111111222335666788899877543
No 105
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.39 E-value=7.4e-13 Score=120.46 Aligned_cols=101 Identities=20% Similarity=0.183 Sum_probs=79.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCC-C--CCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQL-P--YPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~l-p--~~~~sFDlV~~~~~ 289 (372)
.+|||||||+|.++..+++... ...++|+|+|+.+++.|+++ ++ ++.+...|+..+ + +++++||.|++++.
T Consensus 36 ~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~ 114 (218)
T 3dxy_A 36 PVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFP 114 (218)
T ss_dssp CEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESC
T ss_pred CeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCC
Confidence 6899999999999999998754 35799999999999887755 54 467777776663 3 78899999999754
Q ss_pred cccccccH--------HHHHHHHHhcccCCeEEEEEeCC
Q 017377 290 GIIWDKKE--------GIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 290 ~~~~~~~~--------~~~L~el~rvLkPGG~lvis~p~ 320 (372)
..|.... ..++.++.++|||||++++++..
T Consensus 115 -~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 115 -DPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp -CCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred -CCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 3343221 14999999999999999998763
No 106
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.38 E-value=2e-12 Score=117.34 Aligned_cols=110 Identities=16% Similarity=0.086 Sum_probs=86.1
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC---CeEEEEeec
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL---PAMIGNFIS 271 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl---~~~~~~~d~ 271 (372)
...+.+.+.+...++ .+|||||||+|.++..+++.+ ..++++|+++.+++.|+++.. .+.+...|.
T Consensus 57 ~~~~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~ 125 (231)
T 1vbf_A 57 NLGIFMLDELDLHKG--------QKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDG 125 (231)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCG
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc
Confidence 445566666655554 799999999999999999875 568999999999999987732 566666666
Q ss_pred cCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 272 RQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 272 ~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
.....++++||+|++..++.++. .++.++|+|||+++++.+...
T Consensus 126 ~~~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~l~~~~~~~~ 169 (231)
T 1vbf_A 126 TLGYEEEKPYDRVVVWATAPTLL-------CKPYEQLKEGGIMILPIGVGR 169 (231)
T ss_dssp GGCCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEECSSS
T ss_pred ccccccCCCccEEEECCcHHHHH-------HHHHHHcCCCcEEEEEEcCCC
Confidence 65333468899999998876653 368999999999999987654
No 107
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.38 E-value=1.4e-12 Score=128.55 Aligned_cols=125 Identities=15% Similarity=0.097 Sum_probs=95.7
Q ss_pred ccc-cchhHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc------
Q 017377 188 LVF-DGVKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER------ 260 (372)
Q Consensus 188 ~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r------ 260 (372)
..| +.....+..+.+.+...++ .+|||||||+|.++..++.... ...++|+|+++.+++.|+++
T Consensus 152 ~vYGEt~~~~i~~il~~l~l~~g--------d~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frk 222 (438)
T 3uwp_A 152 EVYGETSFDLVAQMIDEIKMTDD--------DLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRK 222 (438)
T ss_dssp GGGGGTHHHHHHHHHHHHCCCTT--------CEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHhcCCCCC--------CEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 455 3345667777788777666 7999999999999999886522 23589999999999887652
Q ss_pred -----CC---CeEEEEeeccCCCCCC--CCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 261 -----GL---PAMIGNFISRQLPYPS--LSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 261 -----gl---~~~~~~~d~~~lp~~~--~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
|+ ++.+..+|+..+|+++ ..||+|+++.. +++ ++....|.++.|+|||||.|++..+....
T Consensus 223 r~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~-~F~-pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 223 WMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNF-AFG-PEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp HHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCT-TCC-HHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred HHHHhCCCCCCeEEEECcccCCccccccCCccEEEEccc-ccC-chHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 33 4678888888888754 47999999854 333 67778899999999999999998765543
No 108
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.37 E-value=4.4e-12 Score=124.89 Aligned_cols=101 Identities=23% Similarity=0.208 Sum_probs=84.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||+|||+|.++..+++.+ ..|+++|+++.+++.|+++ ++.+.+...|....+.++++||+|+|+..+++.
T Consensus 235 ~~VLDlGcG~G~~~~~la~~g---~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 235 RQVLDLGAGYGALTLPLARMG---AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp CEEEEETCTTSTTHHHHHHTT---CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CEEEEEeeeCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 689999999999999999885 4799999999999988765 566777778888877777899999998764441
Q ss_pred ----cccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 294 ----DKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 294 ----~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.++...++.++.++|+|||.++++....
T Consensus 312 ~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 312 GAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp CSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred ccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 2455679999999999999999997643
No 109
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.37 E-value=3.9e-12 Score=119.64 Aligned_cols=104 Identities=13% Similarity=0.005 Sum_probs=81.4
Q ss_pred CCeEEEeCCCC---cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEeeccCCC-----------CCCC
Q 017377 217 VQSVLDVGCGF---GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQLP-----------YPSL 279 (372)
Q Consensus 217 ~~~VLDIGCG~---G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d~~~lp-----------~~~~ 279 (372)
..+|||||||+ |.++..+..... ...|+++|+|+.|++.|+++. -.+.+...|+.+.+ ++..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 37899999999 998776665432 367999999999999998762 34667777765421 3335
Q ss_pred CccEEEeccccccccc-cHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 280 SFDMVHCAQCGIIWDK-KEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 280 sFDlV~~~~~~~~~~~-~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+||+|+++.+++|+.+ +...+|+++.++|+|||+|++++...
T Consensus 157 ~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 8999999988777754 36789999999999999999998765
No 110
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.36 E-value=6.8e-12 Score=118.90 Aligned_cols=130 Identities=15% Similarity=0.137 Sum_probs=89.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEE-EeeccCCC---CCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIG-NFISRQLP---YPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~-~~d~~~lp---~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||||||||.++..|++.+. ..|+|+|+|+.|++.+.++...+... ..++..++ ++..+||+|+|..++++.
T Consensus 87 ~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl 164 (291)
T 3hp7_A 87 MITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL 164 (291)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG
T ss_pred cEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhH
Confidence 6899999999999999998853 46999999999999876654444322 12233333 344569999998665543
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeCC-CCC----CC-CCC---cchhhHHHHHHHHHHHhcCeeEEee
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSPE-SKP----RG-SSS---SRKNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p~-~~~----~~-~~~---~~e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
..+|.++.|+|+|||.+++..-+ ... .. ... +..+...-+.+.++++..+|....-
T Consensus 165 ----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 165 ----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp ----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred ----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45899999999999999987322 111 00 111 2233445566777888899987654
No 111
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.36 E-value=4.3e-12 Score=123.83 Aligned_cols=105 Identities=15% Similarity=0.155 Sum_probs=85.1
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCC--CCCCCCccEEEec
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL--PYPSLSFDMVHCA 287 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~l--p~~~~sFDlV~~~ 287 (372)
+..+|||||||+|.++..+++... ...++++|+ +.+++.|+++ ++ .+.+...|.... |+| ++||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEe
Confidence 347999999999999999998753 357999999 9999998876 33 366777777664 566 789999999
Q ss_pred cccccccccH-HHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 288 QCGIIWDKKE-GIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 288 ~~~~~~~~~~-~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
.++++|.++. ..+|+++.++|+|||.+++.++....
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 9988886433 47899999999999999998875544
No 112
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.36 E-value=8.4e-12 Score=115.86 Aligned_cols=101 Identities=18% Similarity=0.125 Sum_probs=78.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCC--CCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLP--YPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp--~~~~sFDlV~~~~~ 289 (372)
.+|||+|||+|.++..+++++. ..++++|+++.+++.|+++ ++. +.+...|...++ +++++||+|+++-.
T Consensus 51 ~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 51 GKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp CEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 7899999999999999998853 2799999999999988875 443 677777777665 56789999999743
Q ss_pred cccc-------------------cccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 290 GIIW-------------------DKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 290 ~~~~-------------------~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.+.. ..+...++.++.++|+|||.+++..+.
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 178 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP 178 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH
Confidence 2221 012346899999999999999997653
No 113
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.35 E-value=5.5e-12 Score=118.75 Aligned_cols=101 Identities=18% Similarity=0.153 Sum_probs=77.5
Q ss_pred CeEEEeCCCCcH----HHHHHHhc-CC-c-eeEEEEeeCCHHHHHHHHHcC-----------------------------
Q 017377 218 QSVLDVGCGFGS----FGAHLVSL-KL-M-AVCVAVYEATGSQVQLALERG----------------------------- 261 (372)
Q Consensus 218 ~~VLDIGCG~G~----~~~~L~~~-~~-~-~~~v~gvD~s~~~v~~A~~rg----------------------------- 261 (372)
.+|||+|||+|. ++..|++. +. . ...|+|+|+|+.|++.|++.-
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 186 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLV 186 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEE
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCce
Confidence 689999999998 55556654 21 1 358999999999999998741
Q ss_pred -------CCeEEEEeeccCCCCC-CCCccEEEecccccccccc-HHHHHHHHHhcccCCeEEEEEe
Q 017377 262 -------LPAMIGNFISRQLPYP-SLSFDMVHCAQCGIIWDKK-EGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 262 -------l~~~~~~~d~~~lp~~-~~sFDlV~~~~~~~~~~~~-~~~~L~el~rvLkPGG~lvis~ 318 (372)
-.+.+...|....|++ .++||+|+|.++++++.++ ...++.++.++|+|||+|++..
T Consensus 187 ~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 187 RVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 0245566666666665 5789999999888877433 2579999999999999999853
No 114
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.35 E-value=2.6e-12 Score=118.20 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=77.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----------CC-CeEEEEeeccC-CC--CCCCCccE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----------GL-PAMIGNFISRQ-LP--YPSLSFDM 283 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----------gl-~~~~~~~d~~~-lp--~~~~sFDl 283 (372)
.+|||||||+|.++..|++... ...++|+|+|+.|++.|+++ +. ++.+...|+.. ++ +++++||.
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 6899999999999999998753 35799999999999987642 33 46677777775 66 78899999
Q ss_pred EEecccccccccc--------HHHHHHHHHhcccCCeEEEEEeCC
Q 017377 284 VHCAQCGIIWDKK--------EGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 284 V~~~~~~~~~~~~--------~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
|++.+. ..|... ...+|.++.++|||||.|++.+..
T Consensus 127 v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 127 MFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 987643 233211 135899999999999999998653
No 115
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.35 E-value=4.4e-12 Score=113.55 Aligned_cols=116 Identities=13% Similarity=0.047 Sum_probs=86.0
Q ss_pred hHHHHHHHHHHccC-CCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEE
Q 017377 194 KDYSRQIAEMIGLG-TDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIG 267 (372)
Q Consensus 194 ~~~~~~l~~~l~~~-~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~ 267 (372)
....+.+.+.+... .+ .+|||+|||+|.++..++.++. ..|+++|+|+.+++.|+++ ++ ++.+.
T Consensus 39 ~~~~~~l~~~l~~~~~~--------~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~ 108 (202)
T 2fpo_A 39 DRVRETLFNWLAPVIVD--------AQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVV 108 (202)
T ss_dssp HHHHHHHHHHHHHHHTT--------CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHHhhcCC--------CeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEE
Confidence 44555555555431 22 6899999999999998887753 3689999999999988765 44 46677
Q ss_pred EeeccC-CCCCCCCccEEEeccccccccccHHHHHHHHHh--cccCCeEEEEEeCCC
Q 017377 268 NFISRQ-LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADR--LLKPGGYFVLTSPES 321 (372)
Q Consensus 268 ~~d~~~-lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~r--vLkPGG~lvis~p~~ 321 (372)
..|+.. ++.++++||+|++... ++. .....++.++.+ +|+|||.++++....
T Consensus 109 ~~D~~~~~~~~~~~fD~V~~~~p-~~~-~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 109 NSNAMSFLAQKGTPHNIVFVDPP-FRR-GLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp CSCHHHHHSSCCCCEEEEEECCS-SST-TTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred ECCHHHHHhhcCCCCCEEEECCC-CCC-CcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 777655 5666789999999855 443 455567888865 699999999987754
No 116
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.35 E-value=1.9e-11 Score=120.07 Aligned_cols=118 Identities=15% Similarity=0.123 Sum_probs=86.8
Q ss_pred hhHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC----Ce
Q 017377 193 VKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL----PA 264 (372)
Q Consensus 193 ~~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl----~~ 264 (372)
...-.+.+.+.++...+ .+|||+|||+|.++..+++.+. ...++++|+|+.+++.|+++ ++ .+
T Consensus 207 ~d~~~~~ll~~l~~~~~--------~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v 277 (375)
T 4dcm_A 207 LDIGARFFMQHLPENLE--------GEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRC 277 (375)
T ss_dssp CCHHHHHHHHTCCCSCC--------SEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGE
T ss_pred ccHHHHHHHHhCcccCC--------CeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceE
Confidence 33444556666655443 7899999999999999998853 36799999999999988865 43 25
Q ss_pred EEEEeeccCCCCCCCCccEEEeccccccc---ccc-HHHHHHHHHhcccCCeEEEEEeCC
Q 017377 265 MIGNFISRQLPYPSLSFDMVHCAQCGIIW---DKK-EGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 265 ~~~~~d~~~lp~~~~sFDlV~~~~~~~~~---~~~-~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.+...|... ++++++||+|+|+..+++. ... ...++.++.++|+|||.++++...
T Consensus 278 ~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 278 EFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp EEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred EEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 556666554 5678899999998765432 122 235899999999999999998753
No 117
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.35 E-value=2.9e-12 Score=124.59 Aligned_cols=96 Identities=21% Similarity=0.247 Sum_probs=79.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEecccc-
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCG- 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~- 290 (372)
.+|||||||+|.++..+++.+. ..++|+|+|+ +++.|+++ ++. +.+...++..+++++++||+|++....
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGA--RKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTC--SEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CEEEEEeccchHHHHHHHHCCC--CEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 7899999999999999998843 4789999994 88877754 554 778888999999999999999996432
Q ss_pred -ccccccHHHHHHHHHhcccCCeEEEE
Q 017377 291 -IIWDKKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 291 -~~~~~~~~~~L~el~rvLkPGG~lvi 316 (372)
.+.......++.++.|+|||||+++.
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 23336677899999999999999973
No 118
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.35 E-value=4.4e-12 Score=122.92 Aligned_cols=116 Identities=17% Similarity=0.150 Sum_probs=87.8
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEe
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNF 269 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~ 269 (372)
....+.+.+.+....+ .+|||+|||+|.++..+++.+.. ..++++|+|+.+++.|+++ ++...+...
T Consensus 182 d~~~~~ll~~l~~~~~--------~~VLDlGcG~G~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~ 252 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTK--------GKVLDVGCGAGVLSVAFARHSPK-IRLTLCDVSAPAVEASRATLAANGVEGEVFAS 252 (343)
T ss_dssp CHHHHHHHHHSCTTCC--------SBCCBTTCTTSHHHHHHHHHCTT-CBCEEEESBHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred cHHHHHHHHhcCcCCC--------CeEEEecCccCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCCCCEEEEc
Confidence 3445566666644333 68999999999999999988633 4689999999999988865 556666655
Q ss_pred eccCCCCCCCCccEEEeccccccc----cccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 270 ISRQLPYPSLSFDMVHCAQCGIIW----DKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 270 d~~~lp~~~~sFDlV~~~~~~~~~----~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
|... +.+++||+|+|+..+++. ..+...++.++.++|+|||.+++..+.
T Consensus 253 d~~~--~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 253 NVFS--EVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp STTT--TCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred cccc--cccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 5543 447899999999765431 234467999999999999999998764
No 119
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.35 E-value=5.4e-12 Score=110.18 Aligned_cols=120 Identities=17% Similarity=0.078 Sum_probs=87.4
Q ss_pred chhHHHHHHHHHHcc-CCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--Ce
Q 017377 192 GVKDYSRQIAEMIGL-GTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PA 264 (372)
Q Consensus 192 ~~~~~~~~l~~~l~~-~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~ 264 (372)
....+.+.+.+.+.. ..+ .+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++ ++ .+
T Consensus 27 ~~~~~~~~~~~~l~~~~~~--------~~vLD~GcG~G~~~~~~~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~ 96 (187)
T 2fhp_A 27 TTDKVKESIFNMIGPYFDG--------GMALDLYSGSGGLAIEAVSRG--MDKSICIEKNFAALKVIKENIAITKEPEKF 96 (187)
T ss_dssp CCHHHHHHHHHHHCSCCSS--------CEEEETTCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHTCGGGE
T ss_pred CHHHHHHHHHHHHHhhcCC--------CCEEEeCCccCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHhCCCcce
Confidence 345666677777642 233 789999999999999888864 25699999999999988765 43 35
Q ss_pred EEEEeeccCC----CCCCCCccEEEeccccccccccHHHHHHHH--HhcccCCeEEEEEeCCCCC
Q 017377 265 MIGNFISRQL----PYPSLSFDMVHCAQCGIIWDKKEGIFLIEA--DRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 265 ~~~~~d~~~l----p~~~~sFDlV~~~~~~~~~~~~~~~~L~el--~rvLkPGG~lvis~p~~~~ 323 (372)
.+...|.... ++++++||+|+++.. ++. .....++..+ .++|+|||.+++..+....
T Consensus 97 ~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 97 EVRKMDANRALEQFYEEKLQFDLVLLDPP-YAK-QEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCC-GGG-CCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred EEEECcHHHHHHHHHhcCCCCCEEEECCC-CCc-hhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 6666665442 233688999999865 332 3445567777 8999999999999876543
No 120
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.34 E-value=9.9e-13 Score=116.75 Aligned_cols=113 Identities=13% Similarity=0.188 Sum_probs=83.8
Q ss_pred hhHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEE
Q 017377 193 VKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGN 268 (372)
Q Consensus 193 ~~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~ 268 (372)
.+..++.+.+.++ .+.+|||+|||+|.++..++...+.. .++++|+|+.|++.++++ |+...+..
T Consensus 36 ld~fY~~~~~~l~----------~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~ 104 (200)
T 3fzg_A 36 LNDFYTYVFGNIK----------HVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF 104 (200)
T ss_dssp HHHHHHHHHHHSC----------CCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEE
T ss_pred HHHHHHHHHhhcC----------CCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEE
Confidence 3444555555552 23789999999999999998775554 899999999999988865 56533333
Q ss_pred eeccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 269 FISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 269 ~d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
.+.... .+.++||+|++...+++. ++...++.++.+.|+|||++|-..
T Consensus 105 ~d~~~~-~~~~~~DvVLa~k~LHlL-~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 105 LNKESD-VYKGTYDVVFLLKMLPVL-KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp ECCHHH-HTTSEEEEEEEETCHHHH-HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred eccccc-CCCCCcChhhHhhHHHhh-hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 333322 467889999999887777 666667779999999999876554
No 121
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.34 E-value=4.3e-12 Score=116.58 Aligned_cols=99 Identities=14% Similarity=0.062 Sum_probs=76.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEeecc---CCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISR---QLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d~~---~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||+|||+|.++..+++.-.....|+++|+++.|++.++++. .++.....+.. ..++..+++|+|++..
T Consensus 79 ~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~--- 155 (233)
T 4df3_A 79 DRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADV--- 155 (233)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECC---
T ss_pred CEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEec---
Confidence 89999999999999999987334467999999999999887652 23444444432 3456778999998752
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
+.+++...++.++.++|||||+++++..
T Consensus 156 ~~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 156 AQPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp CCTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 3335667799999999999999999864
No 122
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.34 E-value=4.6e-12 Score=121.40 Aligned_cols=112 Identities=16% Similarity=0.059 Sum_probs=88.5
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEEe
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNF 269 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-~~~~~~ 269 (372)
...+.+.+.+...++ .+|||||||+|.++..+++.+.....++++|+++.+++.|+++ +++ +.+...
T Consensus 62 ~~~~~l~~~l~~~~~--------~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~ 133 (317)
T 1dl5_A 62 SLMALFMEWVGLDKG--------MRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG 133 (317)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred HHHHHHHHhcCCCCc--------CEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 455566676666555 7999999999999999998754335699999999999988876 543 667777
Q ss_pred eccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 270 d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
|....+.++++||+|++..++.++. .++.++|||||.++++..+.
T Consensus 134 d~~~~~~~~~~fD~Iv~~~~~~~~~-------~~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 134 DGYYGVPEFSPYDVIFVTVGVDEVP-------ETWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSCCC-------HHHHHHEEEEEEEEEEBCBG
T ss_pred ChhhccccCCCeEEEEEcCCHHHHH-------HHHHHhcCCCcEEEEEECCC
Confidence 7776555668999999998877663 56889999999999987654
No 123
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.34 E-value=8e-12 Score=120.10 Aligned_cols=131 Identities=18% Similarity=0.161 Sum_probs=95.3
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccc
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQC 289 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~ 289 (372)
+..+|||||||+|.++..+++... ...++++|+ +.+++.|+++ ++ .+.+...|.. .++|. +||+|++..+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~v 244 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAV 244 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESC
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehh
Confidence 347999999999999999998753 356889999 9999988865 43 3667777765 46665 8999999999
Q ss_pred ccccccc-HHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchh-----------hHHHHHHHHHHHhcCeeEEe
Q 017377 290 GIIWDKK-EGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKN-----------KSLLKVMEEFTEKICWSLIA 352 (372)
Q Consensus 290 ~~~~~~~-~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~-----------~~~w~~i~~l~~~lcw~~~~ 352 (372)
+++|.++ ...+|+++.++|+|||++++.++..... .+.... ....++++.+.++.+++.+.
T Consensus 245 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 317 (332)
T 3i53_A 245 LHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE--HAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRA 317 (332)
T ss_dssp GGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-----CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEE
T ss_pred hccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC--CccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 8888543 3579999999999999999998755442 110000 00123455666777887763
No 124
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.33 E-value=4.2e-12 Score=123.04 Aligned_cols=95 Identities=19% Similarity=0.265 Sum_probs=77.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEecccc-
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCG- 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~- 290 (372)
.+|||||||+|.++..+++.+. ..++++|+++ +++.|+++ ++ .+.+...++..+++++++||+|+++...
T Consensus 66 ~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 142 (340)
T 2fyt_A 66 KVVLDVGCGTGILSMFAAKAGA--KKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGY 142 (340)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBT
T ss_pred CEEEEeeccCcHHHHHHHHcCC--CEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchh
Confidence 7899999999999999998752 4699999996 88887764 43 4677788888889988999999997532
Q ss_pred -ccccccHHHHHHHHHhcccCCeEEE
Q 017377 291 -IIWDKKEGIFLIEADRLLKPGGYFV 315 (372)
Q Consensus 291 -~~~~~~~~~~L~el~rvLkPGG~lv 315 (372)
.+...+...++.++.++|||||.++
T Consensus 143 ~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 143 FLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 2223455679999999999999998
No 125
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.33 E-value=1.1e-11 Score=112.99 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=73.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEeeccC----CCCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQ----LPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d~~~----lp~~~~sFDlV~~~~~~ 290 (372)
.+|||+|||+|.++..+++... ...++++|+++.+++.|+++. .++.+...|+.. ++++ ++||+|++..
T Consensus 76 ~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~~-- 151 (230)
T 1fbn_A 76 SKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYEDV-- 151 (230)
T ss_dssp CEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEECC--
T ss_pred CEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEEec--
Confidence 7899999999999999998732 357999999999999887652 245666667766 6776 7899999321
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEE
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis 317 (372)
.-......++.++.++|+|||+++++
T Consensus 152 -~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 152 -AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp -CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 11111256799999999999999997
No 126
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.33 E-value=2.1e-12 Score=111.01 Aligned_cols=116 Identities=22% Similarity=0.224 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHccC--CCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEE
Q 017377 194 KDYSRQIAEMIGLG--TDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIG 267 (372)
Q Consensus 194 ~~~~~~l~~~l~~~--~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~ 267 (372)
....+.+.+.+... .+ .+|||+|||+|.++..+++.+.. ++++|+++.+++.|+++ ++++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~--------~~vLD~GcG~G~~~~~l~~~~~~---v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 93 (171)
T 1ws6_A 25 VRLRKALFDYLRLRYPRR--------GRFLDPFAGSGAVGLEAASEGWE---AVLVEKDPEAVRLLKENVRRTGLGARVV 93 (171)
T ss_dssp HHHHHHHHHHHHHHCTTC--------CEEEEETCSSCHHHHHHHHTTCE---EEEECCCHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHHHhhccCC--------CeEEEeCCCcCHHHHHHHHCCCe---EEEEeCCHHHHHHHHHHHHHcCCceEEE
Confidence 45555565555431 33 68999999999999999988643 89999999999988865 4456666
Q ss_pred EeeccC-CC-C--CCCCccEEEeccccccccccHHHHHHHHH--hcccCCeEEEEEeCCCCC
Q 017377 268 NFISRQ-LP-Y--PSLSFDMVHCAQCGIIWDKKEGIFLIEAD--RLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 268 ~~d~~~-lp-~--~~~sFDlV~~~~~~~~~~~~~~~~L~el~--rvLkPGG~lvis~p~~~~ 323 (372)
..|... ++ + .+++||+|+++..++ .+...++..+. ++|+|||.++++.+....
T Consensus 94 ~~d~~~~~~~~~~~~~~~D~i~~~~~~~---~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 94 ALPVEVFLPEAKAQGERFTVAFMAPPYA---MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp CSCHHHHHHHHHHTTCCEEEEEECCCTT---SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred eccHHHHHHhhhccCCceEEEEECCCCc---hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 666544 22 1 134899999986533 23334666666 999999999999886543
No 127
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.33 E-value=5.7e-12 Score=115.11 Aligned_cols=98 Identities=15% Similarity=0.196 Sum_probs=70.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCC-HHHHHHH---HHc----CC-CeEEEEeeccCCCCCCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEAT-GSQVQLA---LER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s-~~~v~~A---~~r----gl-~~~~~~~d~~~lp~~~~sFDlV~~~~ 288 (372)
.+|||||||+|.++..++... ....++|+|+| +.|++.| +++ ++ ++.+...++..+|. ..||.|.+..
T Consensus 26 ~~vLDiGCG~G~~~~~la~~~-~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~--~~~d~v~~i~ 102 (225)
T 3p2e_A 26 RVHIDLGTGDGRNIYKLAIND-QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPF--ELKNIADSIS 102 (225)
T ss_dssp EEEEEETCTTSHHHHHHHHTC-TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCG--GGTTCEEEEE
T ss_pred CEEEEEeccCcHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhh--hccCeEEEEE
Confidence 689999999999999998654 34779999999 7777776 433 44 46777788877753 2334444433
Q ss_pred cccccc-------ccHHHHHHHHHhcccCCeEEEEEe
Q 017377 289 CGIIWD-------KKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 289 ~~~~~~-------~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
+.++|. .+...+|.++.|+|||||.+++..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 103 ILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp EESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 323332 122458999999999999999943
No 128
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.33 E-value=7.3e-12 Score=115.24 Aligned_cols=108 Identities=19% Similarity=0.191 Sum_probs=86.3
Q ss_pred HHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHc-----CC-CeEEEEee
Q 017377 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALER-----GL-PAMIGNFI 270 (372)
Q Consensus 198 ~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~r-----gl-~~~~~~~d 270 (372)
..+.+.+...++ .+|||+|||+|.++..+++. +. ...++++|+++.+++.|+++ +. .+.+...|
T Consensus 86 ~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d 156 (258)
T 2pwy_A 86 SAMVTLLDLAPG--------MRVLEAGTGSGGLTLFLARAVGE-KGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGK 156 (258)
T ss_dssp HHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESC
T ss_pred HHHHHHcCCCCC--------CEEEEECCCcCHHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence 345555555554 79999999999999999987 32 35799999999999998876 53 46677778
Q ss_pred ccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 271 SRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 271 ~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
....++++++||+|++. + +++..++.++.++|+|||++++..+.
T Consensus 157 ~~~~~~~~~~~D~v~~~-----~-~~~~~~l~~~~~~L~~gG~l~~~~~~ 200 (258)
T 2pwy_A 157 LEEAELEEAAYDGVALD-----L-MEPWKVLEKAALALKPDRFLVAYLPN 200 (258)
T ss_dssp GGGCCCCTTCEEEEEEE-----S-SCGGGGHHHHHHHEEEEEEEEEEESC
T ss_pred hhhcCCCCCCcCEEEEC-----C-cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 88878888899999984 2 34446899999999999999999874
No 129
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.33 E-value=7.9e-12 Score=115.94 Aligned_cols=120 Identities=18% Similarity=0.093 Sum_probs=89.2
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEEeeccCCCCC---CCCccEEEecc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNFISRQLPYP---SLSFDMVHCAQ 288 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-~~~~~~d~~~lp~~---~~sFDlV~~~~ 288 (372)
..+|||||||+|..+..++... ....|+++|+++.+++.|+++ ++. +.+...++.+++.. +++||+|+|..
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a 159 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARA 159 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEES
T ss_pred CCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECC
Confidence 4789999999999999998764 236799999999999988765 553 67777777776643 48999999974
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEe
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~ 352 (372)
+ .+...++.++.++|||||++++..... ...+...+....+.++++...
T Consensus 160 ~-----~~~~~ll~~~~~~LkpgG~l~~~~g~~----------~~~e~~~~~~~l~~~G~~~~~ 208 (249)
T 3g89_A 160 V-----APLCVLSELLLPFLEVGGAAVAMKGPR----------VEEELAPLPPALERLGGRLGE 208 (249)
T ss_dssp S-----CCHHHHHHHHGGGEEEEEEEEEEECSC----------CHHHHTTHHHHHHHHTEEEEE
T ss_pred c-----CCHHHHHHHHHHHcCCCeEEEEEeCCC----------cHHHHHHHHHHHHHcCCeEEE
Confidence 3 345679999999999999999865321 112333444555667777654
No 130
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.32 E-value=1.9e-11 Score=115.07 Aligned_cols=121 Identities=13% Similarity=0.138 Sum_probs=92.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||+|||+|.++..+++.+.. .++++|+|+.+++.|+++ ++. +.+...|+..++. +++||+|+++..
T Consensus 127 ~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p-- 201 (278)
T 2frn_A 127 ELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-- 201 (278)
T ss_dssp CEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--
T ss_pred CEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc--
Confidence 78999999999999999988643 699999999999988865 554 6677788877776 789999998632
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEe
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~ 352 (372)
.....++.++.++|+|||.+++.+...... ......+.+...++..+|+...
T Consensus 202 ---~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~------~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ---VRTHEFIPKALSIAKDGAIIHYHNTVPEKL------MPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ---SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG------TTTTTHHHHHHHHHHTTCEEEE
T ss_pred ---hhHHHHHHHHHHHCCCCeEEEEEEeecccc------ccccHHHHHHHHHHHcCCeeEE
Confidence 222458899999999999999987753210 1112345566777888888765
No 131
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.32 E-value=3.4e-12 Score=111.01 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=83.6
Q ss_pred HHHHHHHHHHc-cCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEE
Q 017377 195 DYSRQIAEMIG-LGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIG 267 (372)
Q Consensus 195 ~~~~~l~~~l~-~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~ 267 (372)
...+.+.+.+. ...+ .+|||+|||+|.++..+++.+ ...++++|+++.+++.|+++ ++. +.+.
T Consensus 17 ~~~~~~~~~l~~~~~~--------~~vLDlGcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 86 (177)
T 2esr_A 17 KVRGAIFNMIGPYFNG--------GRVLDLFAGSGGLAIEAVSRG--MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLL 86 (177)
T ss_dssp -CHHHHHHHHCSCCCS--------CEEEEETCTTCHHHHHHHHTT--CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEE
T ss_pred HHHHHHHHHHHhhcCC--------CeEEEeCCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEE
Confidence 34445556655 3333 789999999999999999874 25799999999999988865 332 5566
Q ss_pred EeeccC-CCCCCCCccEEEeccccccccccHHHHHHHHH--hcccCCeEEEEEeCCCCC
Q 017377 268 NFISRQ-LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEAD--RLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 268 ~~d~~~-lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~--rvLkPGG~lvis~p~~~~ 323 (372)
..|... ++..+++||+|+++.. ++. .....++..+. ++|+|||.+++..+....
T Consensus 87 ~~d~~~~~~~~~~~fD~i~~~~~-~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 87 KMEAERAIDCLTGRFDLVFLDPP-YAK-ETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp CSCHHHHHHHBCSCEEEEEECCS-SHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred ECcHHHhHHhhcCCCCEEEECCC-CCc-chHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 666554 3444567999999854 222 33345677776 999999999999876543
No 132
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.32 E-value=2e-11 Score=119.36 Aligned_cols=103 Identities=18% Similarity=0.139 Sum_probs=83.4
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEecccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~ 290 (372)
..+|||||||+|.++..+++... ...++++|+ +.+++.|+++ ++ .+.+...|.. .+++. .||+|++..++
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vl 278 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVL 278 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCG
T ss_pred CcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhh
Confidence 37999999999999999998743 356899999 9999988864 33 3667777766 56666 89999999998
Q ss_pred ccccccH-HHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 291 IIWDKKE-GIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 291 ~~~~~~~-~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
++|.++. ..+|+++.++|+|||++++.++....
T Consensus 279 h~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 279 HDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp GGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 8885433 37999999999999999998875543
No 133
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.31 E-value=8.9e-12 Score=111.77 Aligned_cols=111 Identities=18% Similarity=0.160 Sum_probs=83.6
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEe
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNF 269 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~ 269 (372)
.....+.+.+...++ .+|||||||+|.++..+++.......++++|+++.+++.|+++ ++ ++.+...
T Consensus 64 ~~~~~~~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 135 (215)
T 2yxe_A 64 HMVGMMCELLDLKPG--------MKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVG 135 (215)
T ss_dssp HHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEES
T ss_pred HHHHHHHHhhCCCCC--------CEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC
Confidence 344556666655444 7999999999999999998742225799999999999998875 43 3556666
Q ss_pred eccCCCCC-CCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 270 ISRQLPYP-SLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 270 d~~~lp~~-~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+... +++ +++||+|++..++.++. .++.++|||||.+++..+..
T Consensus 136 d~~~-~~~~~~~fD~v~~~~~~~~~~-------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 136 DGTL-GYEPLAPYDRIYTTAAGPKIP-------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp CGGG-CCGGGCCEEEEEESSBBSSCC-------HHHHHTEEEEEEEEEEESSS
T ss_pred Cccc-CCCCCCCeeEEEECCchHHHH-------HHHHHHcCCCcEEEEEECCC
Confidence 6533 333 67899999998876653 47899999999999998754
No 134
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.31 E-value=1.6e-12 Score=115.76 Aligned_cols=116 Identities=11% Similarity=0.022 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHcc-CCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC----CCeEEEE
Q 017377 194 KDYSRQIAEMIGL-GTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----LPAMIGN 268 (372)
Q Consensus 194 ~~~~~~l~~~l~~-~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg----l~~~~~~ 268 (372)
..+.+.+.+.+.. .++ .+|||+|||+|.++..+++... ...++++|+++.+++.|+++- ..+.+..
T Consensus 15 ~~~~~~~~~~l~~~~~~--------~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 85 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSG--------TRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAA 85 (215)
T ss_dssp HHHHHHHHHHHTTCCTT--------EEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCH
T ss_pred HHHHHHHHHHhhhcCCC--------CEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEE
Confidence 3455566666644 333 7899999999999999998853 467999999999999888662 2334444
Q ss_pred eeccCCCCCC-----CCccEEEecccccccc------cc-------------------HHHHHHHHHhcccCCeE-EEEE
Q 017377 269 FISRQLPYPS-----LSFDMVHCAQCGIIWD------KK-------------------EGIFLIEADRLLKPGGY-FVLT 317 (372)
Q Consensus 269 ~d~~~lp~~~-----~sFDlV~~~~~~~~~~------~~-------------------~~~~L~el~rvLkPGG~-lvis 317 (372)
.|... ++++ ++||+|+++...++.. .. ...++.++.++|+|||+ +++.
T Consensus 86 ~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 86 ADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred cchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 45444 5555 8999999974432211 00 05678899999999999 5554
Q ss_pred eC
Q 017377 318 SP 319 (372)
Q Consensus 318 ~p 319 (372)
.+
T Consensus 165 ~~ 166 (215)
T 4dzr_A 165 VG 166 (215)
T ss_dssp CT
T ss_pred EC
Confidence 43
No 135
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.31 E-value=4.4e-12 Score=118.91 Aligned_cols=96 Identities=15% Similarity=0.179 Sum_probs=77.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-----CC-CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-----gl-~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||+|||+|.++..+++.-.....++++|+++.+++.|+++ +. ++.+...|... ++++++||+|++.
T Consensus 112 ~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~---- 186 (275)
T 1yb2_A 112 MDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD---- 186 (275)
T ss_dssp CEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC----
T ss_pred CEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc----
Confidence 7999999999999999998611235799999999999988876 43 36677777665 6777899999983
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+ +++..++.++.++|+|||+++++++.
T Consensus 187 -~-~~~~~~l~~~~~~LkpgG~l~i~~~~ 213 (275)
T 1yb2_A 187 -I-PDPWNHVQKIASMMKPGSVATFYLPN 213 (275)
T ss_dssp -C-SCGGGSHHHHHHTEEEEEEEEEEESS
T ss_pred -C-cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 2 34456999999999999999999874
No 136
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.31 E-value=1.5e-11 Score=109.57 Aligned_cols=95 Identities=18% Similarity=0.177 Sum_probs=76.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEEeeccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-~~~~~~d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+|||+|||+|.++..++... ....++++|+++.+++.|+++ ++. +.+...+....+ ++++||+|+++..
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF--- 141 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS---
T ss_pred CeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc---
Confidence 689999999999999999863 235799999999999988764 543 667777776665 4678999998642
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.+...++.++.++|+|||++++...
T Consensus 142 --~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 --ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp --SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred --CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 4456799999999999999999854
No 137
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.31 E-value=6.1e-12 Score=123.56 Aligned_cols=98 Identities=22% Similarity=0.202 Sum_probs=79.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++.+. ..|+++|+| .|++.|+++ ++. +.+...++..++++ ++||+|++....+
T Consensus 65 ~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 65 KTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGY 140 (376)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBT
T ss_pred CEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhh
Confidence 7899999999999999998853 379999999 899887764 443 67888888888887 8999999965333
Q ss_pred ccc--ccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 292 IWD--KKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 292 ~~~--~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
... .....++.++.++|+|||.++++..
T Consensus 141 ~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred cccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 322 4566799999999999999986543
No 138
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.30 E-value=1.8e-11 Score=114.37 Aligned_cols=110 Identities=21% Similarity=0.122 Sum_probs=86.3
Q ss_pred HHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-----C---CCeEEEE
Q 017377 197 SRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-----G---LPAMIGN 268 (372)
Q Consensus 197 ~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-----g---l~~~~~~ 268 (372)
...+.+.+...++ .+|||+|||+|.++..++........++++|+++.+++.|+++ + .++.+..
T Consensus 88 ~~~i~~~~~~~~~--------~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~ 159 (280)
T 1i9g_A 88 AAQIVHEGDIFPG--------ARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV 159 (280)
T ss_dssp HHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC
T ss_pred HHHHHHHcCCCCC--------CEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 3455555555554 7899999999999999998521235789999999999988875 3 2467777
Q ss_pred eeccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 269 FISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 269 ~d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.|....++++++||+|++.. .++..++.++.++|+|||++++..+.
T Consensus 160 ~d~~~~~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 160 SDLADSELPDGSVDRAVLDM------LAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp SCGGGCCCCTTCEEEEEEES------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CchHhcCCCCCceeEEEECC------cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 78888888888999999842 23445899999999999999999874
No 139
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.30 E-value=1.4e-11 Score=120.08 Aligned_cols=99 Identities=25% Similarity=0.318 Sum_probs=80.2
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEecccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~ 290 (372)
..+|||||||+|.++..+++... ...++++|+ +.+++.|+++ ++ .+.+...|... +++. .||+|++..++
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl 258 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFVL 258 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESCG
T ss_pred CCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEeccc
Confidence 37999999999999999998753 357899999 9999988864 44 36677776654 4544 39999999998
Q ss_pred ccccccH-HHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWDKKE-GIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~-~~~L~el~rvLkPGG~lvis~p 319 (372)
++|.+.. ..+|+++.++|+|||++++.++
T Consensus 259 ~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 259 LNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 8885433 4799999999999999999887
No 140
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.29 E-value=2.2e-11 Score=118.41 Aligned_cols=100 Identities=17% Similarity=0.205 Sum_probs=82.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++... ...++++|+ +.+++.|+++ ++. +.+...|....|+++. |+|++..+++
T Consensus 192 ~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--D~v~~~~vlh 267 (359)
T 1x19_A 192 KKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPEA--DAVLFCRILY 267 (359)
T ss_dssp CEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCCC--SEEEEESCGG
T ss_pred CEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCCC--CEEEEechhc
Confidence 7999999999999999998753 357899999 9999988865 442 6777778877777654 9999999988
Q ss_pred ccccc-HHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 292 IWDKK-EGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 292 ~~~~~-~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+|.++ ...+|+++.++|+|||++++.++..
T Consensus 268 ~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 268 SANEQLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp GSCHHHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred cCCHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 88542 5679999999999999999988544
No 141
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.29 E-value=8.2e-11 Score=108.67 Aligned_cols=100 Identities=18% Similarity=0.148 Sum_probs=77.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccC-CCCC--CCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQ-LPYP--SLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~-lp~~--~~sFDlV~~~~ 288 (372)
.+|||||||+|..+..+++.......++++|+++.+++.|+++ ++. +.+...|+.. ++.. .++||+|++..
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~ 144 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDA 144 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECS
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECC
Confidence 7899999999999999998743246799999999999988876 553 6666666544 3332 35899999864
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
. ..+...++.++.++|||||++++.+...
T Consensus 145 ~----~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 145 D----KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp C----GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred c----hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 2 2445568999999999999999986643
No 142
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.29 E-value=2.5e-11 Score=117.41 Aligned_cols=145 Identities=13% Similarity=0.154 Sum_probs=101.1
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCC-CCCCCccEEEeccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLP-YPSLSFDMVHCAQC 289 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp-~~~~sFDlV~~~~~ 289 (372)
..+|||||||+|.++..+++.... ..++++|+ +.+++.|+++ ++ .+.+...|....+ ++++.||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~v 257 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDC 257 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEecc
Confidence 479999999999999999987543 67889999 7788877764 43 2667777766655 23467999999999
Q ss_pred ccccccc-HHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcch--------------hhHHHHHHHHHHHhcCeeEEeee
Q 017377 290 GIIWDKK-EGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRK--------------NKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 290 ~~~~~~~-~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e--------------~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
+++|.++ ...+|+++.++|+|||++++.++........+... .....+.++.+.++.+|+.+...
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 337 (352)
T 3mcz_A 258 LHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERS 337 (352)
T ss_dssp GGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeeec
Confidence 8888543 36799999999999999999886544422111000 00113345667788888887532
Q ss_pred ---cceEEEEec
Q 017377 355 ---DETFIWQKT 363 (372)
Q Consensus 355 ---~~~~iw~K~ 363 (372)
...++-+||
T Consensus 338 ~g~~~l~~a~kp 349 (352)
T 3mcz_A 338 IGRYTLLIGQRS 349 (352)
T ss_dssp ETTEEEEEEECC
T ss_pred cCceEEEEEecC
Confidence 223445555
No 143
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.28 E-value=1.4e-11 Score=114.35 Aligned_cols=116 Identities=16% Similarity=0.118 Sum_probs=86.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||+|||+|.++..+++.+. .++++|+++.+++.|+++ ++.+.+...+... ++++++||+|+++... +
T Consensus 122 ~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~-~~~~~~fD~Vv~n~~~-~- 195 (254)
T 2nxc_A 122 DKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA-ALPFGPFDLLVANLYA-E- 195 (254)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH-HGGGCCEEEEEEECCH-H-
T ss_pred CEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh-cCcCCCCCEEEECCcH-H-
Confidence 7899999999999999998764 799999999999988875 5545555544433 2456789999997432 2
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEee
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
....++.++.++|+|||++++++.... ..+.+....++.+|+....
T Consensus 196 --~~~~~l~~~~~~LkpgG~lils~~~~~------------~~~~v~~~l~~~Gf~~~~~ 241 (254)
T 2nxc_A 196 --LHAALAPRYREALVPGGRALLTGILKD------------RAPLVREAMAGAGFRPLEE 241 (254)
T ss_dssp --HHHHHHHHHHHHEEEEEEEEEEEEEGG------------GHHHHHHHHHHTTCEEEEE
T ss_pred --HHHHHHHHHHHHcCCCCEEEEEeeccC------------CHHHHHHHHHHCCCEEEEE
Confidence 235689999999999999999876322 1344556667778887643
No 144
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.28 E-value=1.2e-11 Score=112.00 Aligned_cols=101 Identities=19% Similarity=0.204 Sum_probs=76.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccC-CCC-----CCCCccEEE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQ-LPY-----PSLSFDMVH 285 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~-lp~-----~~~sFDlV~ 285 (372)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ ++. +.+...|+.. ++. ..++||+|+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~ 139 (221)
T 3u81_A 60 SLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVF 139 (221)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEE
T ss_pred CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEE
Confidence 7899999999999999998532346799999999999988875 543 6666666533 332 227899999
Q ss_pred eccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 286 ~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+.....++ .+...++..+ ++|+|||++++.+..
T Consensus 140 ~d~~~~~~-~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 140 LDHWKDRY-LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp ECSCGGGH-HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EcCCcccc-hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 98654444 3444567777 999999999997664
No 145
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.28 E-value=2.1e-11 Score=113.52 Aligned_cols=101 Identities=17% Similarity=0.103 Sum_probs=78.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCC---------eEEEEeeccCC-------CCCCCCc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLP---------AMIGNFISRQL-------PYPSLSF 281 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~---------~~~~~~d~~~l-------p~~~~sF 281 (372)
.+|||+|||+|.++..++.+.. ...++++|+++.+++.|+++-.. +.+...|.... ++++++|
T Consensus 38 ~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 38 CRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp EEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 6899999999999999998853 36799999999999999876322 56777777665 3667899
Q ss_pred cEEEecccccc----------------c-cccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 282 DMVHCAQCGII----------------W-DKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 282 DlV~~~~~~~~----------------~-~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
|+|+++-.... . ......++.++.++|+|||.+++..+
T Consensus 117 D~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 117 HHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 99999832211 1 12355789999999999999999865
No 146
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.28 E-value=4.2e-11 Score=112.81 Aligned_cols=100 Identities=13% Similarity=0.046 Sum_probs=74.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeC-CHHHHHHHHHcC---------C------CeEEEEeeccCCC--C---
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEA-TGSQVQLALERG---------L------PAMIGNFISRQLP--Y--- 276 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~-s~~~v~~A~~rg---------l------~~~~~~~d~~~lp--~--- 276 (372)
.+|||||||+|.++..++..+. ..|+++|+ ++.+++.|+++. + .+.+..++..+.. +
T Consensus 81 ~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 81 KTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp CEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHH
T ss_pred CeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 6899999999999999988753 36899999 899998887652 1 2333333222211 1
Q ss_pred -CCCCccEEEeccccccccccHHHHHHHHHhccc---C--CeEEEEEeCC
Q 017377 277 -PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLK---P--GGYFVLTSPE 320 (372)
Q Consensus 277 -~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLk---P--GG~lvis~p~ 320 (372)
++++||+|+++.++++. ++...++.++.++|+ | ||.+++....
T Consensus 159 ~~~~~fD~Ii~~dvl~~~-~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFH-QAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HSCSSBSEEEEESCCSCG-GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred ccCCCCCEEEEeCcccCh-HHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 36789999998887665 677789999999999 9 9998776443
No 147
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.28 E-value=2.6e-11 Score=109.67 Aligned_cols=98 Identities=18% Similarity=0.137 Sum_probs=77.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC------CeEEEEeeccCCCCCCCCccEEEec
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL------PAMIGNFISRQLPYPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl------~~~~~~~d~~~lp~~~~sFDlV~~~ 287 (372)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ +. ++.+...|....+.++++||+|++.
T Consensus 79 ~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~ 158 (226)
T 1i1n_A 79 AKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVG 158 (226)
T ss_dssp CEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEEC
Confidence 7999999999999999987621225799999999999988764 22 4666667766665567889999998
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
....++ +.++.++|||||+++++.+...
T Consensus 159 ~~~~~~-------~~~~~~~LkpgG~lv~~~~~~~ 186 (226)
T 1i1n_A 159 AAAPVV-------PQALIDQLKPGGRLILPVGPAG 186 (226)
T ss_dssp SBBSSC-------CHHHHHTEEEEEEEEEEESCTT
T ss_pred CchHHH-------HHHHHHhcCCCcEEEEEEecCC
Confidence 765443 4688999999999999987543
No 148
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.28 E-value=1.8e-11 Score=117.95 Aligned_cols=111 Identities=23% Similarity=0.292 Sum_probs=84.0
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEE
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGN 268 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~ 268 (372)
.|.+.+.+.+...++ .+|||||||+|.++..+++.+. ..++++|++ .+++.|+++ ++ .+.+..
T Consensus 25 ~y~~ai~~~~~~~~~--------~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~ 93 (328)
T 1g6q_1 25 SYRNAIIQNKDLFKD--------KIVLDVGCGTGILSMFAAKHGA--KHVIGVDMS-SIIEMAKELVELNGFSDKITLLR 93 (328)
T ss_dssp HHHHHHHHHHHHHTT--------CEEEEETCTTSHHHHHHHHTCC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHHHHHhhHhhcCC--------CEEEEecCccHHHHHHHHHCCC--CEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEE
Confidence 345555544444333 7899999999999999998753 468999999 588877654 44 367777
Q ss_pred eeccCCCCCCCCccEEEecccccc--ccccHHHHHHHHHhcccCCeEEEE
Q 017377 269 FISRQLPYPSLSFDMVHCAQCGII--WDKKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 269 ~d~~~lp~~~~sFDlV~~~~~~~~--~~~~~~~~L~el~rvLkPGG~lvi 316 (372)
.++..+++++++||+|++....++ .......++.++.++|+|||.++.
T Consensus 94 ~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 94 GKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp SCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred CchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 888888888889999999743222 225566799999999999999983
No 149
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.27 E-value=6.1e-12 Score=107.91 Aligned_cols=96 Identities=15% Similarity=0.095 Sum_probs=75.2
Q ss_pred CeEEEeCCCCcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~~ 288 (372)
.+|||+|||+|.++..+++. +. ...++++|+++ +++. ..+.+...|....+ +++++||+|+++.
T Consensus 24 ~~vLd~G~G~G~~~~~l~~~~~~-~~~v~~~D~~~-~~~~-----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~ 96 (180)
T 1ej0_A 24 MTVVDLGAAPGGWSQYVVTQIGG-KGRIIACDLLP-MDPI-----VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDM 96 (180)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCT-TCEEEEEESSC-CCCC-----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeCCCCCHHHHHHHHHhCC-CCeEEEEECcc-cccc-----CcEEEEEcccccchhhhhhhccCCCCceeEEEECC
Confidence 68999999999999999887 32 35789999998 6543 34566666777766 7788999999986
Q ss_pred ccccccccH-----------HHHHHHHHhcccCCeEEEEEeCCC
Q 017377 289 CGIIWDKKE-----------GIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 289 ~~~~~~~~~-----------~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.+++. .+. ..++.++.++|+|||.++++.+..
T Consensus 97 ~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 97 APNMS-GTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp CCCCC-SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred Ccccc-CCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 64433 222 578999999999999999988754
No 150
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.27 E-value=4e-11 Score=112.32 Aligned_cols=115 Identities=17% Similarity=0.143 Sum_probs=82.9
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEE
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGN 268 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-~~~~~ 268 (372)
+...+.+.+.+. .+ ..+|||+|||+|.++..++... ....++++|+|+.+++.|+++ +++ +.+..
T Consensus 96 e~l~~~~l~~~~-~~--------~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~ 165 (276)
T 2b3t_A 96 ECLVEQALARLP-EQ--------PCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQ 165 (276)
T ss_dssp HHHHHHHHHHSC-SS--------CCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred HHHHHHHHHhcc-cC--------CCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE
Confidence 344555555554 22 2689999999999999998763 235799999999999988875 543 66666
Q ss_pred eeccCCCCCCCCccEEEeccccc-------------ccc-----------ccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 269 FISRQLPYPSLSFDMVHCAQCGI-------------IWD-----------KKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 269 ~d~~~lp~~~~sFDlV~~~~~~~-------------~~~-----------~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.|... ++++++||+|+++...+ |.+ .....++.++.++|+|||++++...
T Consensus 166 ~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 166 SDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp CSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred cchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 66544 34467899999983321 111 2335688999999999999999854
No 151
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.27 E-value=1.8e-11 Score=118.91 Aligned_cols=112 Identities=23% Similarity=0.229 Sum_probs=86.2
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEE
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGN 268 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~ 268 (372)
.|.+.+.+.+...++ .+|||||||+|.++..+++.+. ..++++|+|+ +++.|+++ ++ .+.+..
T Consensus 37 ~y~~~i~~~l~~~~~--------~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~ 105 (348)
T 2y1w_A 37 TYQRAILQNHTDFKD--------KIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIP 105 (348)
T ss_dssp HHHHHHHHTGGGTTT--------CEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-HHHHHHHHHHHTTCTTTEEEEE
T ss_pred HHHHHHHhccccCCc--------CEEEEcCCCccHHHHHHHhCCC--CEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEE
Confidence 455566665554444 7999999999999999998743 4789999996 77777654 54 367777
Q ss_pred eeccCCCCCCCCccEEEecccccccc-ccHHHHHHHHHhcccCCeEEEEEe
Q 017377 269 FISRQLPYPSLSFDMVHCAQCGIIWD-KKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 269 ~d~~~lp~~~~sFDlV~~~~~~~~~~-~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
.+...++++ ++||+|++....+|+. +.....+.++.++|+|||.+++..
T Consensus 106 ~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 106 GKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp SCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred cchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 788887766 6899999987777775 444568889999999999999653
No 152
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.26 E-value=1.3e-11 Score=120.69 Aligned_cols=98 Identities=16% Similarity=0.124 Sum_probs=79.8
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
..+|||||||+|.++..++++... ..++++|+ +.+++.|++. ..+.+...|... ++++ ||+|++..+++||. +
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~-~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~-d 282 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPL-IKGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWS-D 282 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGSC-H
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCC-CeEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccCC-H
Confidence 379999999999999999988643 56888999 9999887653 246677777766 6664 99999999988884 4
Q ss_pred HH--HHHHHHHhcccCCeEEEEEeCCC
Q 017377 297 EG--IFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 297 ~~--~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+. .+|+++.++|+|||++++.++..
T Consensus 283 ~~~~~~l~~~~~~L~pgG~l~i~e~~~ 309 (372)
T 1fp1_D 283 EKCIEFLSNCHKALSPNGKVIIVEFIL 309 (372)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 44 79999999999999999987543
No 153
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.26 E-value=2e-11 Score=112.42 Aligned_cols=108 Identities=23% Similarity=0.303 Sum_probs=84.7
Q ss_pred HHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEe
Q 017377 197 SRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALER----GLP--AMIGNF 269 (372)
Q Consensus 197 ~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~ 269 (372)
...+...+...++ .+|||+|||+|.++..+++. +. ...++++|+++.+++.|+++ +++ +.+...
T Consensus 82 ~~~i~~~~~~~~~--------~~vldiG~G~G~~~~~l~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~ 152 (255)
T 3mb5_A 82 AALIVAYAGISPG--------DFIVEAGVGSGALTLFLANIVGP-EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK 152 (255)
T ss_dssp HHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS
T ss_pred HHHHHHhhCCCCC--------CEEEEecCCchHHHHHHHHHhCC-CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 3355556655554 79999999999999999987 42 36799999999999998876 543 667766
Q ss_pred eccCCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 270 ISRQLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 270 d~~~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
|... ++++++||+|+++. +++..++.++.++|+|||.+++..+.
T Consensus 153 d~~~-~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 153 DIYE-GIEEENVDHVILDL------PQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp CGGG-CCCCCSEEEEEECS------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred chhh-ccCCCCcCEEEECC------CCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 7664 37788999999852 34456899999999999999999774
No 154
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.26 E-value=6.3e-11 Score=108.84 Aligned_cols=99 Identities=17% Similarity=0.067 Sum_probs=70.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHH----HHHHHcCCCeEEEEeeccCCC---CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQV----QLALERGLPAMIGNFISRQLP---YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v----~~A~~rgl~~~~~~~d~~~lp---~~~~sFDlV~~~~~~ 290 (372)
.+|||+|||+|.++..+++.......|+++|+++.|+ +.|+++ .++.+...|+.... ...++||+|++....
T Consensus 78 ~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~ 156 (232)
T 3id6_C 78 TKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ 156 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC
T ss_pred CEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhccccceEEEEecCCC
Confidence 7999999999999999988632345799999999875 445444 35666666665432 124689999997431
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
......++..+.++|||||+|+++...
T Consensus 157 ---~~~~~il~~~~~~~LkpGG~lvisik~ 183 (232)
T 3id6_C 157 ---PDQTDIAIYNAKFFLKVNGDMLLVIKA 183 (232)
T ss_dssp ---TTHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred ---hhHHHHHHHHHHHhCCCCeEEEEEEcc
Confidence 222333455667799999999998643
No 155
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.26 E-value=5.3e-11 Score=114.08 Aligned_cols=136 Identities=15% Similarity=0.163 Sum_probs=94.9
Q ss_pred HHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccC
Q 017377 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQ 273 (372)
Q Consensus 199 ~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~ 273 (372)
.+...+...++ .+|||+|||+|..+..+++.......++++|+++.+++.++++ ++ ++.+...|...
T Consensus 109 l~~~~l~~~~g--------~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~ 180 (315)
T 1ixk_A 109 YPPVALDPKPG--------EIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLH 180 (315)
T ss_dssp HHHHHHCCCTT--------CEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGG
T ss_pred HHHHHhCCCCC--------CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhh
Confidence 34455555555 7899999999999999998643346799999999999888765 55 46677777777
Q ss_pred CCCCCCCccEEEecc-----cccccccc----------------HHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchh
Q 017377 274 LPYPSLSFDMVHCAQ-----CGIIWDKK----------------EGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKN 332 (372)
Q Consensus 274 lp~~~~sFDlV~~~~-----~~~~~~~~----------------~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~ 332 (372)
++..+++||+|++.- ..++..++ ...+|.++.++|||||++++++...... +.
T Consensus 181 ~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~------En 254 (315)
T 1ixk_A 181 IGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE------EN 254 (315)
T ss_dssp GGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG------GT
T ss_pred cccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH------Hh
Confidence 665567899999841 11111111 1468999999999999999998755431 22
Q ss_pred hHHHHHHHHHHHhcCeeEE
Q 017377 333 KSLLKVMEEFTEKICWSLI 351 (372)
Q Consensus 333 ~~~w~~i~~l~~~lcw~~~ 351 (372)
. ..++.+.++.+++.+
T Consensus 255 e---~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 255 E---FVIQWALDNFDVELL 270 (315)
T ss_dssp H---HHHHHHHHHSSEEEE
T ss_pred H---HHHHHHHhcCCCEEe
Confidence 1 234556566677665
No 156
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.26 E-value=2.7e-11 Score=117.55 Aligned_cols=99 Identities=25% Similarity=0.347 Sum_probs=80.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++... ...++++|+ +.+++.|+++ ++ .+.+...|..+ +++. .||+|++..+++
T Consensus 185 ~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~ 260 (360)
T 1tw3_A 185 RHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFVLL 260 (360)
T ss_dssp SEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESCGG
T ss_pred cEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccccc
Confidence 7999999999999999998854 356889999 8899888764 44 46677666654 4554 499999999988
Q ss_pred cccccH-HHHHHHHHhcccCCeEEEEEeCC
Q 017377 292 IWDKKE-GIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 292 ~~~~~~-~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+|.++. ..+|+++.++|+|||++++.++.
T Consensus 261 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 261 NWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 885433 47999999999999999999876
No 157
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.26 E-value=2.1e-11 Score=111.36 Aligned_cols=111 Identities=17% Similarity=0.158 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEE
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGN 268 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~ 268 (372)
......+.+.+...++ .+|||||||+|.++..+++... ..++++|+++.+++.|+++ ++ ++.+..
T Consensus 77 ~~~~~~~~~~l~~~~~--------~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~ 146 (235)
T 1jg1_A 77 PHMVAIMLEIANLKPG--------MNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVIL 146 (235)
T ss_dssp HHHHHHHHHHHTCCTT--------CCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3455566666665554 7899999999999999998743 4689999999999998875 43 355555
Q ss_pred eeccCCCCCCC-CccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 269 FISRQLPYPSL-SFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 269 ~d~~~lp~~~~-sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
.|. ..+++++ .||+|++..++.++. .++.++|+|||.++++.++..
T Consensus 147 ~d~-~~~~~~~~~fD~Ii~~~~~~~~~-------~~~~~~L~pgG~lvi~~~~~~ 193 (235)
T 1jg1_A 147 GDG-SKGFPPKAPYDVIIVTAGAPKIP-------EPLIEQLKIGGKLIIPVGSYH 193 (235)
T ss_dssp SCG-GGCCGGGCCEEEEEECSBBSSCC-------HHHHHTEEEEEEEEEEECSSS
T ss_pred CCc-ccCCCCCCCccEEEECCcHHHHH-------HHHHHhcCCCcEEEEEEecCC
Confidence 554 4455554 499999997766553 378899999999999988543
No 158
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.25 E-value=7.2e-12 Score=115.18 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=77.0
Q ss_pred CeEEEeCCCCcHHHHHHHhc---CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC---CCCC-CCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSL---KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL---PYPS-LSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~---~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l---p~~~-~sFDlV~~~~~~ 290 (372)
.+|||||||+|..+..|++. ......|+++|+++.+++.|+....++.+...|.... ++.+ .+||+|++...
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~- 161 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA- 161 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECCc-
Confidence 68999999999999999886 1234679999999999988874444577777777663 5434 47999998654
Q ss_pred ccccccHHHHHHHHHh-cccCCeEEEEEeC
Q 017377 291 IIWDKKEGIFLIEADR-LLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~~~~L~el~r-vLkPGG~lvis~p 319 (372)
| .+...+|.++.+ +|||||++++.+.
T Consensus 162 -~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 162 -H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp -C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred -h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 3 355679999997 9999999999864
No 159
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.25 E-value=2.9e-11 Score=109.43 Aligned_cols=96 Identities=20% Similarity=0.120 Sum_probs=77.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCC----ceeEEEEeeCCHHHHHHHHHc----C------CCeEEEEeeccCCC----CCCC
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKL----MAVCVAVYEATGSQVQLALER----G------LPAMIGNFISRQLP----YPSL 279 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~----~~~~v~gvD~s~~~v~~A~~r----g------l~~~~~~~d~~~lp----~~~~ 279 (372)
.+|||||||+|.++..+++... ....++++|+++.+++.|+++ + .++.+...|....+ .+.+
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~ 161 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELG 161 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHC
T ss_pred CEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCC
Confidence 7899999999999999998743 235799999999999988876 3 24667777776654 5567
Q ss_pred CccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 280 SFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 280 sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+||+|++...+.+ ++.++.++|+|||.+++..+.
T Consensus 162 ~fD~I~~~~~~~~-------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 162 LFDAIHVGASASE-------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CEEEEEECSBBSS-------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CcCEEEECCchHH-------HHHHHHHhcCCCcEEEEEEcc
Confidence 8999999876544 357889999999999999874
No 160
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.25 E-value=3.4e-12 Score=125.38 Aligned_cols=98 Identities=14% Similarity=0.073 Sum_probs=77.9
Q ss_pred CCeEEEeCCC------CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCC------CCCccEE
Q 017377 217 VQSVLDVGCG------FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYP------SLSFDMV 284 (372)
Q Consensus 217 ~~~VLDIGCG------~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~------~~sFDlV 284 (372)
+.+||||||| +|..+..+++.......|+++|+|+.|. ....++.+...|+.++||. +++||+|
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~----~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlV 292 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH----VDELRIRTIQGDQNDAEFLDRIARRYGPFDIV 292 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG----GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh----hcCCCcEEEEecccccchhhhhhcccCCccEE
Confidence 3789999999 6666777766532346799999999983 2344677888888888887 7899999
Q ss_pred EeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 285 HCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 285 ~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+|..+ +++ .+...+|.++.++|||||++++.+..
T Consensus 293 isdgs-H~~-~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 293 IDDGS-HIN-AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp EECSC-CCH-HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred EECCc-ccc-hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 99743 444 66778999999999999999998765
No 161
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.25 E-value=9e-13 Score=120.53 Aligned_cols=96 Identities=16% Similarity=0.101 Sum_probs=78.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||+|||+|.++..+++.+ ..++++|+|+.+++.|+++ ++ ++.+...|...++ ++++||+|+++..+.
T Consensus 80 ~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWG 155 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCS
T ss_pred CEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcC
Confidence 789999999999999999885 5689999999999988765 54 4677777777766 568999999987655
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
+. .+....+.++.++|+|||.+++..
T Consensus 156 ~~-~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 156 GP-DYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp SG-GGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred Cc-chhhhHHHHHHhhcCCcceeHHHH
Confidence 54 444447778999999999977654
No 162
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.25 E-value=1.8e-11 Score=111.60 Aligned_cols=99 Identities=19% Similarity=0.170 Sum_probs=73.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHH----HHHHcCCCeEEEEeeccC---CCCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQ----LALERGLPAMIGNFISRQ---LPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~----~A~~rgl~~~~~~~d~~~---lp~~~~sFDlV~~~~~~ 290 (372)
.+|||+|||+|.++..+++.......++++|+++.+++ .|+++ .++.+...|+.. +++.+++||+|++...
T Consensus 79 ~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~- 156 (233)
T 2ipx_A 79 AKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADVA- 156 (233)
T ss_dssp CEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECCC-
T ss_pred CEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcCC-
Confidence 78999999999999999987212256899999987654 44443 456676667665 4556789999999643
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
..+....++.++.++|||||+++++...
T Consensus 157 --~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 157 --QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp --CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred --CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 2233345688899999999999997654
No 163
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.24 E-value=2.5e-11 Score=116.59 Aligned_cols=101 Identities=14% Similarity=0.054 Sum_probs=81.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----C--CCeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G--LPAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----g--l~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++... ...++++|+ +.+++.|+++ + -.+.+...|... +++ ++||+|++..+++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGG
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhcc
Confidence 6899999999999999998753 357899999 9999988875 2 246677777665 565 6799999999988
Q ss_pred cccccH-HHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 292 IWDKKE-GIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 292 ~~~~~~-~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
+|.++. ..+|+++.++|+|||++++.++...
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 885332 3799999999999999999987543
No 164
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.24 E-value=2.3e-11 Score=110.79 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=76.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC---eEEEEeeccCC-C-CCCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIGNFISRQL-P-YPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~---~~~~~~d~~~l-p-~~~~sFDlV~~~~ 288 (372)
.+|||||||+|..+..|++.......++++|+++.+++.|+++ ++. +.+...|+.+. + +++++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 4899999999999999998633346799999999999988765 544 56666655433 2 3468999999864
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. ..+...++.++.++|||||++++.+..
T Consensus 138 ~----~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 138 S----PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp C----TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred c----HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3 234456899999999999999986543
No 165
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.24 E-value=4.9e-11 Score=115.54 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=76.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHH--cCC--CeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALE--RGL--PAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~--rgl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||||||+|.++..+++... ...++++|++ .++..+.. .+. .+.+...|.. .++| +||+|++..++++|
T Consensus 186 ~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~ 260 (348)
T 3lst_A 186 GTVADVGGGRGGFLLTVLREHP-GLQGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILHNW 260 (348)
T ss_dssp EEEEEETCTTSHHHHHHHHHCT-TEEEEEEECH-HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGGGS
T ss_pred ceEEEECCccCHHHHHHHHHCC-CCEEEEecCH-HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhccCC
Confidence 7999999999999999998754 3568999994 44441110 122 3667767764 4555 89999999998888
Q ss_pred cccH-HHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 294 DKKE-GIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 294 ~~~~-~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
.++. ..+|+++.++|||||++++.+.....
T Consensus 261 ~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~ 291 (348)
T 3lst_A 261 GDEDSVRILTNCRRVMPAHGRVLVIDAVVPE 291 (348)
T ss_dssp CHHHHHHHHHHHHHTCCTTCEEEEEECCBCS
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 5432 57999999999999999998875443
No 166
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.23 E-value=3.2e-11 Score=117.99 Aligned_cols=101 Identities=15% Similarity=0.084 Sum_probs=81.5
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
..+|||||||+|.++..+++.... ..++++|+ +.+++.|+++ ..+.+...|... |+|++ |+|++..++++|.++
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~ 277 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPS-INAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDE 277 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHH
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCC-CEEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHH
Confidence 479999999999999999987533 56889999 8888877654 356777777765 77754 999999998888643
Q ss_pred H-HHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 297 E-GIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 297 ~-~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
. ..+|++++++|+|||++++.+.....
T Consensus 278 ~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 305 (368)
T 3reo_A 278 HCLKLLKNCYAALPDHGKVIVAEYILPP 305 (368)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEECCCCS
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 3 47899999999999999999876443
No 167
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.23 E-value=4e-11 Score=110.44 Aligned_cols=100 Identities=19% Similarity=0.203 Sum_probs=76.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc------------CC-CeEEEEeeccC-CC--CCCCCc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER------------GL-PAMIGNFISRQ-LP--YPSLSF 281 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r------------gl-~~~~~~~d~~~-lp--~~~~sF 281 (372)
.+|||||||+|.++..++..+. ...++|+|+|+.+++.|+++ ++ ++.+...|+.. ++ +++++|
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 6899999999999999998864 35799999999999888653 44 46677777765 55 778999
Q ss_pred cEEEecccccccccc--------HHHHHHHHHhcccCCeEEEEEeC
Q 017377 282 DMVHCAQCGIIWDKK--------EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 282 DlV~~~~~~~~~~~~--------~~~~L~el~rvLkPGG~lvis~p 319 (372)
|.|+.... -.|... ...++.++.++|+|||.|++.+.
T Consensus 130 d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 130 SKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred CEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 99986532 122110 03699999999999999999754
No 168
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.23 E-value=4.3e-11 Score=110.31 Aligned_cols=103 Identities=16% Similarity=-0.004 Sum_probs=74.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcC-CceeEEEEeeCCHHHHHHHHHc---C----C--C------------------------
Q 017377 218 QSVLDVGCGFGSFGAHLVSLK-LMAVCVAVYEATGSQVQLALER---G----L--P------------------------ 263 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~-~~~~~v~gvD~s~~~v~~A~~r---g----l--~------------------------ 263 (372)
.+|||+|||+|.++..++... .....++|+|+|+.+++.|+++ . + .
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAAR 132 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhhh
Confidence 689999999999999998761 1346799999999999998854 1 1 1
Q ss_pred -eE-------------EEEeeccCCCC-----CCCCccEEEecccccccc--------ccHHHHHHHHHhcccCCeEEEE
Q 017377 264 -AM-------------IGNFISRQLPY-----PSLSFDMVHCAQCGIIWD--------KKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 264 -~~-------------~~~~d~~~lp~-----~~~sFDlV~~~~~~~~~~--------~~~~~~L~el~rvLkPGG~lvi 316 (372)
+. +...|...... ..++||+|+|+...++.. +....++.++.++|+|||++++
T Consensus 133 ~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 133 RLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp HHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred hhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEE
Confidence 22 55555544221 345899999985544332 2234789999999999999999
Q ss_pred EeCC
Q 017377 317 TSPE 320 (372)
Q Consensus 317 s~p~ 320 (372)
+...
T Consensus 213 ~~~~ 216 (250)
T 1o9g_A 213 TDRS 216 (250)
T ss_dssp EESS
T ss_pred eCcc
Confidence 5443
No 169
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.23 E-value=4.4e-11 Score=116.89 Aligned_cols=101 Identities=16% Similarity=0.050 Sum_probs=81.8
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
..+|||||||+|.++..+++.... ..++++|+ +.+++.|++. ..+.+...|+.. |+|.+ |+|++..++++|.++
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~ 275 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPT-IKGVNFDL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQ 275 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTT-CEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCC-CeEEEecC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHH
Confidence 379999999999999999987533 56889999 8888777654 357777777776 77754 999999998888643
Q ss_pred -HHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 297 -EGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 297 -~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
...+|++++++|+|||+++|.+.....
T Consensus 276 ~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 276 HCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 347899999999999999998875443
No 170
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.23 E-value=7.2e-11 Score=112.61 Aligned_cols=125 Identities=15% Similarity=0.151 Sum_probs=86.5
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEEeeccCCCC--CCCCccEEE
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQLPY--PSLSFDMVH 285 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---------l~~~~~~~d~~~lp~--~~~sFDlV~ 285 (372)
+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++. ..+.+...|....+. ++++||+|+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi 174 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVI 174 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEE
Confidence 4799999999999999999763 3467999999999999998753 246666666655443 478999999
Q ss_pred eccccccccccH----HHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEE
Q 017377 286 CAQCGIIWDKKE----GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLI 351 (372)
Q Consensus 286 ~~~~~~~~~~~~----~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~ 351 (372)
+.... ++.+.. ..+++++.++|+|||.+++....... .......+....++.+|..+
T Consensus 175 ~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--------~~~~~~~~~~~l~~~GF~~v 235 (304)
T 3bwc_A 175 IDTTD-PAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL--------DLELIEKMSRFIRETGFASV 235 (304)
T ss_dssp EECC----------CCHHHHHHHHHHEEEEEEEEEEECCTTT--------CHHHHHHHHHHHHHHTCSEE
T ss_pred ECCCC-ccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc--------chHHHHHHHHHHHhCCCCcE
Confidence 97543 332222 46899999999999999998654321 11223334444466666543
No 171
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.23 E-value=5.6e-12 Score=109.77 Aligned_cols=87 Identities=23% Similarity=0.121 Sum_probs=72.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC-CeEEEEeeccCCCC---CCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-PAMIGNFISRQLPY---PSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl-~~~~~~~d~~~lp~---~~~sFDlV~~~~~~~~~ 293 (372)
.+|||||||. + .+|+|+.|++.|+++.. .+.+...++..+++ ++++||+|+|+.+++|+
T Consensus 14 ~~vL~~~~g~----------------v-~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~ 76 (176)
T 2ld4_A 14 QFVAVVWDKS----------------S-PVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGST 76 (176)
T ss_dssp SEEEEEECTT----------------S-CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCC
T ss_pred CEEEEecCCc----------------e-eeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhc
Confidence 7999999996 1 27999999999998742 46677778888887 88999999999886666
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.++...+|++++|+|||||++++..+..
T Consensus 77 ~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 104 (176)
T 2ld4_A 77 TLHSAEILAEIARILRPGGCLFLKEPVE 104 (176)
T ss_dssp CCCCHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHCCCCEEEEEEcccc
Confidence 3566789999999999999999987643
No 172
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.23 E-value=3.7e-11 Score=109.72 Aligned_cols=98 Identities=16% Similarity=0.206 Sum_probs=77.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCC-C-CCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-P-YPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~l-p-~~~~sFDlV~~~~~ 289 (372)
.+|||||||+|.++..+++.. ....++++|+++.+++.|+++ ++ .+.+...|+... + ..+++||+|++...
T Consensus 73 ~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 789999999999999999843 246799999999999988865 44 466777776543 3 33689999997632
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
..+...++.++.++|+|||++++....
T Consensus 152 ----~~~~~~~l~~~~~~LkpgG~lv~d~~~ 178 (232)
T 3ntv_A 152 ----KAQSKKFFEIYTPLLKHQGLVITDNVL 178 (232)
T ss_dssp ----SSSHHHHHHHHGGGEEEEEEEEEECTT
T ss_pred ----HHHHHHHHHHHHHhcCCCeEEEEeeCC
Confidence 244556999999999999999986543
No 173
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.22 E-value=4.5e-11 Score=119.22 Aligned_cols=118 Identities=13% Similarity=0.043 Sum_probs=84.5
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHH-------HHc----C-
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLA-------LER----G- 261 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A-------~~r----g- 261 (372)
......+.+.+....+ .+|||||||+|.++..++.... ...++|+|+++.+++.| +++ |
T Consensus 228 p~~v~~ml~~l~l~~g--------~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl 298 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKG--------DTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGM 298 (433)
T ss_dssp HHHHHHHHHHTTCCTT--------CEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCC
Confidence 3445566666655554 7999999999999999998621 24689999999998887 543 5
Q ss_pred -C-CeEEEEeeccCC--CC--CCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 262 -L-PAMIGNFISRQL--PY--PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 262 -l-~~~~~~~d~~~l--p~--~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
. ++.+...+.... ++ ..++||+|+++..+ +.++...+|.++.++|||||.+++..+...
T Consensus 299 ~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~~~d~~~~L~el~r~LKpGG~lVi~d~f~p 363 (433)
T 1u2z_A 299 RLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL--FDEDLNKKVEKILQTAKVGCKIISLKSLRS 363 (433)
T ss_dssp CCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT--CCHHHHHHHHHHHTTCCTTCEEEESSCSSC
T ss_pred CCCceEEEEcCccccccccccccCCCCEEEEeCcc--ccccHHHHHHHHHHhCCCCeEEEEeeccCC
Confidence 2 355554433222 12 24789999997554 335666789999999999999999865443
No 174
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.22 E-value=2.8e-11 Score=117.41 Aligned_cols=100 Identities=15% Similarity=0.107 Sum_probs=80.4
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
...+|||||||+|.++..+++... ...++++|+ +.+++.|++. ..+.+...|... ++|+ ||+|++..+++||.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~- 260 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKYILHNWT- 260 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEESCGGGSC-
T ss_pred cCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeehhhccCC-
Confidence 347999999999999999998743 356899999 9999888754 236666667655 5653 99999999988884
Q ss_pred cHH--HHHHHHHhcccC---CeEEEEEeCCCC
Q 017377 296 KEG--IFLIEADRLLKP---GGYFVLTSPESK 322 (372)
Q Consensus 296 ~~~--~~L~el~rvLkP---GG~lvis~p~~~ 322 (372)
+.. .+|+++.++||| ||++++.++...
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 444 799999999999 999999987543
No 175
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.22 E-value=5e-11 Score=105.56 Aligned_cols=97 Identities=9% Similarity=0.012 Sum_probs=71.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCc-eeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC---------------------
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLM-AVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------------------- 275 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~-~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------------------- 275 (372)
.+|||+|||+|.++..++++... ...++|+|+++.+ ....+.+...|....+
T Consensus 24 ~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~ 97 (201)
T 2plw_A 24 KIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYK 97 (201)
T ss_dssp EEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC------CCTTCEEEECCTTTTSSCCC-----------CHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC------CCCCceEEEccccchhhhhhccccccccccchhhHHH
Confidence 68999999999999999987432 4679999999832 1123556666776665
Q ss_pred ----CCCCCccEEEecccccccc---ccH-------HHHHHHHHhcccCCeEEEEEeCC
Q 017377 276 ----YPSLSFDMVHCAQCGIIWD---KKE-------GIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 276 ----~~~~sFDlV~~~~~~~~~~---~~~-------~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+++++||+|+|+.+..+.. .+. ..++.++.++|||||.+++....
T Consensus 98 ~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 98 LKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 5678999999986533211 121 13788999999999999997653
No 176
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.22 E-value=4.4e-11 Score=116.23 Aligned_cols=118 Identities=21% Similarity=0.097 Sum_probs=88.3
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEe
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNF 269 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~ 269 (372)
.....+.......++ .+|||+|||+|.++..++........++|+|+++.+++.|+++ ++ .+.+...
T Consensus 190 ~la~~l~~~~~~~~~--------~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~ 261 (354)
T 3tma_A 190 VLAQALLRLADARPG--------MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRA 261 (354)
T ss_dssp HHHHHHHHHTTCCTT--------CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEEC
T ss_pred HHHHHHHHHhCCCCC--------CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeC
Confidence 344455555554444 7899999999999999988641235689999999999988875 55 4778888
Q ss_pred eccCCCCCCCCccEEEeccccccc-c------ccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 270 ISRQLPYPSLSFDMVHCAQCGIIW-D------KKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 270 d~~~lp~~~~sFDlV~~~~~~~~~-~------~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
|+.+++.+.+.||+|+++-..... . .....++.++.++|+|||.+++.+++
T Consensus 262 D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 262 DARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp CGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred ChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 888888878889999997331111 1 11246899999999999999999773
No 177
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.22 E-value=8.9e-11 Score=106.28 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=72.6
Q ss_pred CeEEEeCCCCcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHc---CCCeEEEEeeccCC---CCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALER---GLPAMIGNFISRQL---PYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~r---gl~~~~~~~d~~~l---p~~~~sFDlV~~~~~~ 290 (372)
.+|||+|||+|.++..+++. +. ...++++|+++.+++.+.++ ..++.+...|.... +...++||+|++...
T Consensus 75 ~~vLDlG~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~- 152 (227)
T 1g8a_A 75 KSVLYLGIASGTTASHVSDIVGW-EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA- 152 (227)
T ss_dssp CEEEEETTTSTTHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC-
T ss_pred CEEEEEeccCCHHHHHHHHHhCC-CeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC-
Confidence 68999999999999999976 32 24689999999998877654 23466666666552 112368999998643
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.......++.++.++|||||++++...
T Consensus 153 --~~~~~~~~l~~~~~~LkpgG~l~~~~~ 179 (227)
T 1g8a_A 153 --QPTQAKILIDNAEVYLKRGGYGMIAVK 179 (227)
T ss_dssp --STTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --CHhHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 222333459999999999999999843
No 178
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.21 E-value=6.8e-11 Score=110.70 Aligned_cols=107 Identities=22% Similarity=0.221 Sum_probs=82.6
Q ss_pred HHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeecc
Q 017377 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISR 272 (372)
Q Consensus 199 ~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~ 272 (372)
.+.+.+...++ .+|||+|||+|.++..+++.-.....++++|+++.+++.|+++ ++ .+.+...|..
T Consensus 103 ~i~~~~~~~~~--------~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 174 (277)
T 1o54_A 103 FIAMMLDVKEG--------DRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS 174 (277)
T ss_dssp HHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGG
T ss_pred HHHHHhCCCCC--------CEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 44555555444 7899999999999999998721235799999999999998876 54 4566666665
Q ss_pred CCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 273 ~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.. +++++||+|+++. +++..++.++.++|+|||.+++..+.
T Consensus 175 ~~-~~~~~~D~V~~~~------~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 175 EG-FDEKDVDALFLDV------PDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp GC-CSCCSEEEEEECC------SCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred Hc-ccCCccCEEEECC------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 55 6678999999852 34446899999999999999999873
No 179
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.21 E-value=4e-11 Score=115.54 Aligned_cols=109 Identities=20% Similarity=0.134 Sum_probs=79.6
Q ss_pred HHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcC--------------
Q 017377 197 SRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERG-------------- 261 (372)
Q Consensus 197 ~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rg-------------- 261 (372)
...+.+.+...++ .+|||+|||+|.++..++.. +. ...++++|+++.+++.|+++.
T Consensus 94 ~~~~l~~l~~~~g--------~~VLDiG~G~G~~~~~la~~~g~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~ 164 (336)
T 2b25_A 94 INMILSMMDINPG--------DTVLEAGSGSGGMSLFLSKAVGS-QGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEE 164 (336)
T ss_dssp HHHHHHHHTCCTT--------CEEEEECCTTSHHHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSC
T ss_pred HHHHHHhcCCCCC--------CEEEEeCCCcCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHHhhcccccccccc
Confidence 4455566665555 79999999999999999987 43 356899999999999988751
Q ss_pred --CCeEEEEeeccCC--CCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 262 --LPAMIGNFISRQL--PYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 262 --l~~~~~~~d~~~l--p~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.++.+...|.... ++++++||+|++... . +..++.++.++|+|||.+++..+.
T Consensus 165 ~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~-~-----~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 165 WPDNVDFIHKDISGATEDIKSLTFDAVALDML-N-----PHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp CCCCEEEEESCTTCCC-------EEEEEECSS-S-----TTTTHHHHGGGEEEEEEEEEEESS
T ss_pred cCCceEEEECChHHcccccCCCCeeEEEECCC-C-----HHHHHHHHHHhcCCCcEEEEEeCC
Confidence 2466777777665 567788999998632 2 223789999999999999998773
No 180
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.21 E-value=8.1e-11 Score=107.55 Aligned_cols=105 Identities=22% Similarity=0.210 Sum_probs=81.9
Q ss_pred HHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeecc
Q 017377 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISR 272 (372)
Q Consensus 199 ~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~ 272 (372)
.+.+.+...++ .+|||+|||+|.++..+++. ...++++|+++.+++.|+++ ++ .+.+...|..
T Consensus 82 ~~~~~~~~~~~--------~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 150 (248)
T 2yvl_A 82 YIALKLNLNKE--------KRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFK 150 (248)
T ss_dssp HHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTT
T ss_pred HHHHhcCCCCC--------CEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChh
Confidence 45555555454 78999999999999999987 35789999999999998875 43 4566666665
Q ss_pred CCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 273 ~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
...+++++||+|++.. +++..++.++.++|+|||.+++..+.
T Consensus 151 ~~~~~~~~~D~v~~~~------~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 151 DAEVPEGIFHAAFVDV------REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp TSCCCTTCBSEEEECS------SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred hcccCCCcccEEEECC------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5433677899999842 34446899999999999999999874
No 181
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.20 E-value=6.3e-11 Score=107.49 Aligned_cols=95 Identities=19% Similarity=0.209 Sum_probs=74.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCc-----eeEEEEeeCCHHHHHHHHHc----C------CCeEEEEeeccCCCCCC-CCc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLM-----AVCVAVYEATGSQVQLALER----G------LPAMIGNFISRQLPYPS-LSF 281 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~-----~~~v~gvD~s~~~v~~A~~r----g------l~~~~~~~d~~~lp~~~-~sF 281 (372)
.+|||||||+|.++..+++.... ...++++|+++.+++.|+++ + .++.+...|... ++++ ++|
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~f 164 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPY 164 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSE
T ss_pred CEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCc
Confidence 78999999999999999875211 13699999999999988765 2 245666666655 5555 789
Q ss_pred cEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 282 DMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 282 DlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
|+|++...+.+. +.++.++|||||.+++....
T Consensus 165 D~I~~~~~~~~~-------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 165 NAIHVGAAAPDT-------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEECSCBSSC-------CHHHHHTEEEEEEEEEEESC
T ss_pred cEEEECCchHHH-------HHHHHHHhcCCCEEEEEEec
Confidence 999998775554 36889999999999999865
No 182
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.19 E-value=5.9e-11 Score=108.00 Aligned_cols=97 Identities=15% Similarity=0.166 Sum_probs=77.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCC-CCC--CCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-PYP--SLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~l-p~~--~~sFDlV~~~~ 288 (372)
.+|||||||+|.++..+++... ...++++|+++.+++.|+++ ++ .+.+...+.... +.. +++||+|++..
T Consensus 56 ~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 56 ARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp SEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 7899999999999999998742 46799999999999998876 54 366666665543 332 57899999875
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.. .+...++.++.++|+|||.+++.+.
T Consensus 135 ~~----~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 135 AK----GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp GG----SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred CH----HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 42 3556799999999999999999854
No 183
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.19 E-value=6.2e-11 Score=106.14 Aligned_cols=97 Identities=14% Similarity=0.056 Sum_probs=75.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccC-CCCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQ-LPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~-lp~~~~sFDlV~~~~~~ 290 (372)
.+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+...+... ++..++ ||+|++...
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~- 135 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD- 135 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT-
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC-
Confidence 6899999999999999998643246799999999999988865 43 25566666544 354456 999998732
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
..+...++.++.++|+|||++++.+.
T Consensus 136 ---~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 136 ---VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp ---TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred ---hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 24556799999999999999998754
No 184
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.18 E-value=4.4e-11 Score=107.93 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=76.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCC-C-CC----CCCccEEE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQL-P-YP----SLSFDMVH 285 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~l-p-~~----~~sFDlV~ 285 (372)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ ++. +.+...++... + +. .++||+|+
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~ 145 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIY 145 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEE
Confidence 6899999999999999998733246799999999999988765 443 56666655332 2 11 17899999
Q ss_pred eccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 286 ~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+... ..+...++.++.++|+|||++++.+...
T Consensus 146 ~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 146 IDAD----KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp ECSC----GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred ECCC----HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 7532 3455679999999999999999987643
No 185
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.18 E-value=8.7e-11 Score=105.95 Aligned_cols=100 Identities=15% Similarity=0.125 Sum_probs=76.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCC-C-CC---CCCccEEEe
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-P-YP---SLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~l-p-~~---~~sFDlV~~ 286 (372)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ ++ .+.+...|+... + ++ .++||+|++
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~ 139 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFI 139 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEE
Confidence 7899999999999999998743346799999999999988765 54 256666665432 1 11 267999998
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 287 ~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
... ......++.++.++|+|||++++.+...
T Consensus 140 d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 140 DAD----KQNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp CSC----GGGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred cCC----cHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 743 2344568999999999999999876643
No 186
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.17 E-value=2.3e-10 Score=110.60 Aligned_cols=125 Identities=14% Similarity=-0.003 Sum_probs=86.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC---eEEEEeeccCCCC----CCCCccEEEe
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIGNFISRQLPY----PSLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~---~~~~~~d~~~lp~----~~~sFDlV~~ 286 (372)
.+|||+|||+|.++..++..+. .|+++|+|+.+++.|+++ ++. +.+...|+..+.. .+++||+|++
T Consensus 155 ~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 155 LKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 6899999999999999998753 689999999999988865 543 5666666554321 1568999999
Q ss_pred cccc---------ccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEE
Q 017377 287 AQCG---------IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLI 351 (372)
Q Consensus 287 ~~~~---------~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~ 351 (372)
+--. .++..+...++.++.++|+|||++++........ ......+.+...++..++++.
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~------~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRA------SFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTS------CHHHHHHHHHHHTTTSCSEEE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCC------CHHHHHHHHHHHHHHcCCeEE
Confidence 5221 1222445578999999999999988877654321 112223334444456666554
No 187
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=4.8e-10 Score=105.10 Aligned_cols=124 Identities=19% Similarity=0.135 Sum_probs=89.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+|||+|||+|.++..+++... ...++++|+++.+++.|+++ ++ ++.+...|+...+. .++||+|++....
T Consensus 121 ~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~-- 196 (272)
T 3a27_A 121 EVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH-- 196 (272)
T ss_dssp CEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS--
T ss_pred CEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc--
Confidence 7899999999999999998743 35799999999999988764 44 45677777777644 6789999997542
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
....++.++.++|+|||.++++....... ......+.++.+.+..++++...+
T Consensus 197 ---~~~~~l~~~~~~LkpgG~l~~s~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 249 (272)
T 3a27_A 197 ---KTHKFLDKTFEFLKDRGVIHYHETVAEKI------MYERPIERLKFYAEKNGYKLIDYE 249 (272)
T ss_dssp ---SGGGGHHHHHHHEEEEEEEEEEEEEEGGG------TTTHHHHHHHHHHHHTTEEEEEEE
T ss_pred ---cHHHHHHHHHHHcCCCCEEEEEEcCcccc------ccccHHHHHHHHHHHhCCeeEEeE
Confidence 33458899999999999999988754321 111223344555555566554333
No 188
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.16 E-value=1.6e-09 Score=105.28 Aligned_cols=146 Identities=14% Similarity=0.072 Sum_probs=101.3
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC-----CCeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG-----LPAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg-----l~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
..+|+|||||+|.++..++++.+. ..++..|. +.+++.|+++- -.+.+...|....|.+ .+|+|++..+++
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~-~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh 255 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPG-CKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLH 255 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSS-CEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGG
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCC-ceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeecc
Confidence 378999999999999999998654 56777886 78898888752 1366776776655554 479999999999
Q ss_pred cccccH-HHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhh-------------HHHHHHHHHHHhcCeeEEeee---
Q 017377 292 IWDKKE-GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNK-------------SLLKVMEEFTEKICWSLIAQQ--- 354 (372)
Q Consensus 292 ~~~~~~-~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~-------------~~w~~i~~l~~~lcw~~~~~~--- 354 (372)
+|.++. ..+|+++++.|+|||.++|.+...+.....+..... -..++++++.++.+|+.+...
T Consensus 256 ~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v~~~~ 335 (353)
T 4a6d_A 256 DWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQFKKTG 335 (353)
T ss_dssp GSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEEECCS
T ss_pred cCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEEcC
Confidence 996443 468999999999999999998765432211111000 012345667788899877542
Q ss_pred --cceEEEEecCCC
Q 017377 355 --DETFIWQKTVDA 366 (372)
Q Consensus 355 --~~~~iw~K~~~~ 366 (372)
...++-+|.+++
T Consensus 336 ~~~~~i~ArKgt~~ 349 (353)
T 4a6d_A 336 AIYDAILARKGTHH 349 (353)
T ss_dssp SSCEEEEEECCCC-
T ss_pred CceEEEEEEecCcc
Confidence 234566666643
No 189
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.15 E-value=6.9e-11 Score=110.88 Aligned_cols=107 Identities=11% Similarity=0.038 Sum_probs=74.8
Q ss_pred CCCeEEEeCCCC--cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC-----CeEEEEeeccCCC----CC--CCCcc
Q 017377 216 GVQSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-----PAMIGNFISRQLP----YP--SLSFD 282 (372)
Q Consensus 216 ~~~~VLDIGCG~--G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl-----~~~~~~~d~~~lp----~~--~~sFD 282 (372)
+++.|||||||+ +..+..++.+......|+++|+|+.|++.|+++-. .+.+...|..+++ .+ .++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 457999999997 33344444432234679999999999999887621 2567777776642 11 34566
Q ss_pred -----EEEecccccccccc--HHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 283 -----MVHCAQCGIIWDKK--EGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 283 -----lV~~~~~~~~~~~~--~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
.|+++.++++..+. +..++.++.+.|+|||+|+++.....
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 57777665555432 46799999999999999999976543
No 190
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.15 E-value=1.1e-10 Score=118.25 Aligned_cols=96 Identities=24% Similarity=0.260 Sum_probs=76.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..+++.+ ...|+++|+|+ +++.|+++ ++ .+.+...+..+++++ ++||+|+++...+
T Consensus 160 ~~VLDiGcGtG~la~~la~~~--~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~ 235 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAAQAG--ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGY 235 (480)
T ss_dssp CEEEEESCSTTHHHHHHHHTT--CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHH
T ss_pred CEEEEecCcccHHHHHHHHcC--CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchH
Confidence 789999999999999998864 35799999998 88877654 55 367777788777765 5899999987666
Q ss_pred ccc-ccHHHHHHHHHhcccCCeEEEEE
Q 017377 292 IWD-KKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 292 ~~~-~~~~~~L~el~rvLkPGG~lvis 317 (372)
++. ++....+.++.++|+|||++++.
T Consensus 236 ~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 236 MLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 664 33345777899999999999853
No 191
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.15 E-value=4.1e-11 Score=123.86 Aligned_cols=101 Identities=14% Similarity=0.012 Sum_probs=80.7
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----C-CCeEEEEeeccCC--CCCCCCccEEEeccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G-LPAMIGNFISRQL--PYPSLSFDMVHCAQC 289 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----g-l~~~~~~~d~~~l--p~~~~sFDlV~~~~~ 289 (372)
+.+|||||||.|.++..|+.+| ..|+|+|.++.+|+.|+.+ + +++.+.+.+++++ ++++++||+|+|..+
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~g---a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKG---ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred CCeEEEECCCCcHHHHHHHhCC---CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 3689999999999999999987 4699999999999988754 4 5677888887776 567889999999999
Q ss_pred cccccccHH--HHHHHHHhcccCCeEEEEEeCCC
Q 017377 290 GIIWDKKEG--IFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 290 ~~~~~~~~~--~~L~el~rvLkPGG~lvis~p~~ 321 (372)
++|+. ++. ..+..+.+.|+++|..++.....
T Consensus 144 ~ehv~-~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 144 FHHIV-HLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHH-HHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred hhcCC-CHHHHHHHHHHHHHhccccceeeEEecc
Confidence 88884 443 33556777888888777765543
No 192
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.15 E-value=5.2e-10 Score=112.33 Aligned_cols=117 Identities=18% Similarity=0.130 Sum_probs=86.0
Q ss_pred HHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccC
Q 017377 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQ 273 (372)
Q Consensus 199 ~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~ 273 (372)
.+...+...++ .+|||+|||+|..+..+++.......++++|+++.+++.++++ |+ ++.+...|...
T Consensus 250 l~~~~l~~~~g--------~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~ 321 (450)
T 2yxl_A 250 VASIVLDPKPG--------ETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARK 321 (450)
T ss_dssp HHHHHHCCCTT--------CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTC
T ss_pred HHHHhcCCCCc--------CEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhh
Confidence 34455555554 7899999999999999998633335799999999999888765 66 46677777777
Q ss_pred CC--CCCCCccEEEec-----cccccccccH----------------HHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 274 LP--YPSLSFDMVHCA-----QCGIIWDKKE----------------GIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 274 lp--~~~~sFDlV~~~-----~~~~~~~~~~----------------~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
++ +++++||+|++. .+.++..++. ..+|.++.++|||||.+++++.....
T Consensus 322 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~ 394 (450)
T 2yxl_A 322 APEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFK 394 (450)
T ss_dssp CSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred cchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCCh
Confidence 66 566889999962 2222211221 46899999999999999999886543
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.14 E-value=2.6e-10 Score=108.39 Aligned_cols=101 Identities=20% Similarity=0.173 Sum_probs=73.5
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC----------CCeEEEEeeccC-CCCCCCCccEEE
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----------LPAMIGNFISRQ-LPYPSLSFDMVH 285 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg----------l~~~~~~~d~~~-lp~~~~sFDlV~ 285 (372)
+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- ..+.+...|... ++..+++||+|+
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 4799999999999999999873 3467999999999999998751 234555555544 334568999999
Q ss_pred eccccccccccH----HHHHHHHHhcccCCeEEEEEeC
Q 017377 286 CAQCGIIWDKKE----GIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 286 ~~~~~~~~~~~~----~~~L~el~rvLkPGG~lvis~p 319 (372)
+... .++.... ..+++++.++|+|||.+++...
T Consensus 163 ~D~~-~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 163 SDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCC-CccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 9633 3332221 4689999999999999999864
No 194
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.14 E-value=2.1e-10 Score=107.62 Aligned_cols=106 Identities=17% Similarity=0.123 Sum_probs=80.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCCC----CCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPY----PSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp~----~~~sFDlV~~~~ 288 (372)
.+|||+|||+|..+..+++.......|+++|+++.+++.++++ ++ ++.+...|...++. ++++||+|++.-
T Consensus 85 ~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~ 164 (274)
T 3ajd_A 85 DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDA 164 (274)
T ss_dssp CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEE
T ss_pred CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcC
Confidence 7899999999999999998532335799999999999888765 55 46677677666553 367899999862
Q ss_pred ccc-----c------------ccccHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 289 CGI-----I------------WDKKEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 289 ~~~-----~------------~~~~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
... + .......+|.++.++|||||.+++++.....
T Consensus 165 Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~ 216 (274)
T 3ajd_A 165 PCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEV 216 (274)
T ss_dssp CCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCT
T ss_pred CCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCCh
Confidence 111 0 1134467899999999999999999876544
No 195
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.13 E-value=1.5e-10 Score=106.24 Aligned_cols=131 Identities=11% Similarity=0.136 Sum_probs=81.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEE-eeccCC---CCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGN-FISRQL---PYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~-~d~~~l---p~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||||||+|.++..|++.+. ..++|+|+|+.|++.|+++...+.... .+...+ .++...||.+.+..++.++
T Consensus 39 ~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l 116 (232)
T 3opn_A 39 KTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL 116 (232)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG
T ss_pred CEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH
Confidence 6899999999999999998853 369999999999999887654433221 111111 1111123444433332222
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeCCC-CC-------CCCC-CcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSPES-KP-------RGSS-SSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p~~-~~-------~~~~-~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
..+|.++.|+|||||.+++...+. .. .... ....+....+.+.++++..+|+.....
T Consensus 117 ----~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 117 ----DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp ----GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred ----HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 458999999999999999974110 00 0000 011223345667777888899877653
No 196
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.12 E-value=4.7e-11 Score=111.86 Aligned_cols=95 Identities=19% Similarity=0.072 Sum_probs=68.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC-------CeEEE--EeeccCCCCCCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-------PAMIG--NFISRQLPYPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl-------~~~~~--~~d~~~lp~~~~sFDlV~~~~ 288 (372)
.+|||||||+|.++..+++. ..|+|+|+++ |+..+.++.. ++.+. ..|+..++ +++||+|+|..
T Consensus 76 ~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~ 148 (265)
T 2oxt_A 76 GRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDV 148 (265)
T ss_dssp EEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECC
T ss_pred CEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeC
Confidence 78999999999999999887 3488999998 5333322222 35555 66777665 78999999975
Q ss_pred cccccc---cc-HH--HHHHHHHhcccCCe--EEEEEeCC
Q 017377 289 CGIIWD---KK-EG--IFLIEADRLLKPGG--YFVLTSPE 320 (372)
Q Consensus 289 ~~~~~~---~~-~~--~~L~el~rvLkPGG--~lvis~p~ 320 (372)
+ .+.. .+ .. .+|.++.++|+||| .|++....
T Consensus 149 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 149 G-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred c-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 5 2211 11 11 37899999999999 99998765
No 197
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.12 E-value=2.7e-11 Score=114.17 Aligned_cols=95 Identities=19% Similarity=0.134 Sum_probs=69.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC-------CeEEE--EeeccCCCCCCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-------PAMIG--NFISRQLPYPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl-------~~~~~--~~d~~~lp~~~~sFDlV~~~~ 288 (372)
.+|||+|||+|.++..++++ ..|+|+|+++ |+..+.++.. ++.+. ..|+..+| +++||+|+|..
T Consensus 84 ~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~ 156 (276)
T 2wa2_A 84 GTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDI 156 (276)
T ss_dssp EEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECC
T ss_pred CEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECC
Confidence 68999999999999999987 3488999998 5443433322 35566 66777765 78999999985
Q ss_pred cccccc----ccHH--HHHHHHHhcccCCe--EEEEEeCC
Q 017377 289 CGIIWD----KKEG--IFLIEADRLLKPGG--YFVLTSPE 320 (372)
Q Consensus 289 ~~~~~~----~~~~--~~L~el~rvLkPGG--~lvis~p~ 320 (372)
+ .+.. +... .+|.++.++||||| .|++....
T Consensus 157 ~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 157 G-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp C-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred C-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 5 2211 1111 37899999999999 99997765
No 198
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.12 E-value=5.9e-11 Score=109.45 Aligned_cols=100 Identities=12% Similarity=-0.025 Sum_probs=76.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCC-CCC-----CCCccEEE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-PYP-----SLSFDMVH 285 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~l-p~~-----~~sFDlV~ 285 (372)
.+|||||||+|..+..+++.......|+++|+++.+++.|+++ ++ .+.+...|+... +.. +++||+|+
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~ 141 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIF 141 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEE
Confidence 7899999999999999998643346799999999998766554 55 366766666443 221 47899999
Q ss_pred eccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 286 ~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+... ..+...++.++.++|+|||++++.+...
T Consensus 142 ~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~~~ 173 (242)
T 3r3h_A 142 IDAD----KTNYLNYYELALKLVTPKGLIAIDNIFW 173 (242)
T ss_dssp EESC----GGGHHHHHHHHHHHEEEEEEEEEECSSS
T ss_pred EcCC----hHHhHHHHHHHHHhcCCCeEEEEECCcc
Confidence 8643 3445568999999999999999976543
No 199
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.12 E-value=2e-10 Score=105.08 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=75.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccC-CC--------------C
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQ-LP--------------Y 276 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~-lp--------------~ 276 (372)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ ++. +.+...+... ++ |
T Consensus 62 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f 141 (239)
T 2hnk_A 62 KRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDF 141 (239)
T ss_dssp SEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTT
T ss_pred CEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccc
Confidence 7899999999999999998743346799999999999988876 443 5555555432 11 3
Q ss_pred CC--CCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 277 PS--LSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 277 ~~--~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
++ ++||+|++... ..+...++.++.++|+|||++++...
T Consensus 142 ~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 142 AFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp CCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 33 78999998743 23445689999999999999999764
No 200
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.12 E-value=1.6e-09 Score=96.03 Aligned_cols=93 Identities=15% Similarity=0.035 Sum_probs=69.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc-
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK- 296 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~- 296 (372)
.+|||+|||+|.++..++..+ ...++++|+++.+++.|+++..++.+...|...+| ++||+|+++..++++...
T Consensus 53 ~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~ 127 (200)
T 1ne2_A 53 RSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHS 127 (200)
T ss_dssp SEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-------
T ss_pred CEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccCch
Confidence 789999999999999999874 24689999999999999987546677777777764 789999999776665432
Q ss_pred HHHHHHHHHhcccCCeEEEEE
Q 017377 297 EGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 297 ~~~~L~el~rvLkPGG~lvis 317 (372)
...++.++.+++ |+.+++.
T Consensus 128 ~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 128 DRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp CHHHHHHHHHHE--EEEEEEE
T ss_pred hHHHHHHHHHhc--CcEEEEE
Confidence 235889999998 5543333
No 201
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.10 E-value=4.2e-10 Score=108.84 Aligned_cols=102 Identities=18% Similarity=0.106 Sum_probs=76.9
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEEeeccCC--CCCCCCccEE
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQL--PYPSLSFDMV 284 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---------l~~~~~~~d~~~l--p~~~~sFDlV 284 (372)
.+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- ..+.+...|.... .+++++||+|
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 34799999999999999999863 3467999999999999998752 2466666665442 2346789999
Q ss_pred Eecccccccc--cc--HHHHHHHHHhcccCCeEEEEEeC
Q 017377 285 HCAQCGIIWD--KK--EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 285 ~~~~~~~~~~--~~--~~~~L~el~rvLkPGG~lvis~p 319 (372)
++... .++. .. ...++.++.++|+|||.+++...
T Consensus 199 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 199 IVDSS-DPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp EECCC-CTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EECCC-CccCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 99643 2221 11 24699999999999999999744
No 202
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.10 E-value=1.7e-10 Score=112.18 Aligned_cols=99 Identities=16% Similarity=0.131 Sum_probs=78.9
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
..+|||||||+|.++..++++... ..++++|+ +.+++.|++. ..+.+...|... +++ +||+|++..++++|. +
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~-d 266 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPH-LKCTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWN-D 266 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTT-SEEEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEESCGGGSC-H
T ss_pred CCEEEEECCCcCHHHHHHHHHCCC-CeEEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcccccCCC-H
Confidence 378999999999999999988543 56889999 7888777642 236666667666 666 499999999988884 4
Q ss_pred HH--HHHHHHHhcccC---CeEEEEEeCCCC
Q 017377 297 EG--IFLIEADRLLKP---GGYFVLTSPESK 322 (372)
Q Consensus 297 ~~--~~L~el~rvLkP---GG~lvis~p~~~ 322 (372)
.. .+|+++.++|+| ||++++.++...
T Consensus 267 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 267 EQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp HHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 44 799999999999 999999886543
No 203
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.09 E-value=3.3e-10 Score=103.43 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=75.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeecc----CCCCCC--CCccEEE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISR----QLPYPS--LSFDMVH 285 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~----~lp~~~--~sFDlV~ 285 (372)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ ++. +.+...++. .++..+ ++||+|+
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~ 153 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIF 153 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEE
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEE
Confidence 6899999999999999998643346799999999999988765 442 555555532 233334 7899999
Q ss_pred eccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 286 ~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+... ..+...++.++.++|+|||++++....
T Consensus 154 ~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 154 IDAD----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp ECSC----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred ECCC----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 8643 245567899999999999999997654
No 204
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.09 E-value=2e-10 Score=106.23 Aligned_cols=98 Identities=12% Similarity=0.037 Sum_probs=75.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccC-CCC------CCCCccEE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQ-LPY------PSLSFDMV 284 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~-lp~------~~~sFDlV 284 (372)
.+|||||||+|..+..+++.......++++|+++.+++.|+++ ++ .+.+...++.. ++. ++++||+|
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V 160 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFI 160 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEE
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEE
Confidence 7899999999999999998743346799999999999988864 54 35566555543 231 25789999
Q ss_pred EeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 285 HCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 285 ~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
++... ..+...++.++.++|||||++++...
T Consensus 161 ~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 161 FVDAD----KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp EECSC----STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred EEcCc----hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 98643 24456789999999999999998753
No 205
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.08 E-value=3.2e-10 Score=108.58 Aligned_cols=100 Identities=17% Similarity=0.100 Sum_probs=75.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC-----CCeEEEEeeccCC--CCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG-----LPAMIGNFISRQL--PYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg-----l~~~~~~~d~~~l--p~~~~sFDlV~~~~~~ 290 (372)
.+|||||||+|.++..+++.... ..++++|+++.+++.|+++- ..+.+...|.... .+++++||+|++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~-~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~- 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQ-SRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVF- 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTT-CEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCS-
T ss_pred CEEEEEECCcCHHHHHHHHHCCC-cEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCC-
Confidence 48999999999999999985322 47899999999999999862 2356666665443 345789999999632
Q ss_pred cccc-c---cHHHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWD-K---KEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~-~---~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.++. . ....++.++.++|+|||.+++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2221 1 114689999999999999998875
No 206
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.08 E-value=6.7e-10 Score=104.81 Aligned_cols=102 Identities=19% Similarity=0.146 Sum_probs=76.9
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEEeeccC-CCCCCCCccEEEe
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQ-LPYPSLSFDMVHC 286 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---------l~~~~~~~d~~~-lp~~~~sFDlV~~ 286 (372)
+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- ..+.+...|... ++..+++||+|++
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 4799999999999999998763 3467999999999999998762 235566666543 2223678999999
Q ss_pred ccccccccccH----HHHHHHHHhcccCCeEEEEEeCC
Q 017377 287 AQCGIIWDKKE----GIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 287 ~~~~~~~~~~~----~~~L~el~rvLkPGG~lvis~p~ 320 (372)
... .++.... ..++.++.++|+|||.+++....
T Consensus 158 d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 194 (283)
T 2i7c_A 158 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 194 (283)
T ss_dssp ECC-CTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCC
Confidence 633 3332211 46999999999999999998654
No 207
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.08 E-value=4.1e-10 Score=113.31 Aligned_cols=117 Identities=24% Similarity=0.294 Sum_probs=84.7
Q ss_pred HHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCC
Q 017377 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQL 274 (372)
Q Consensus 199 ~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~l 274 (372)
.+...+...++ .+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+.+.+...|+..+
T Consensus 92 l~a~~L~~~~g--------~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l 163 (464)
T 3m6w_A 92 AVGVLLDPKPG--------ERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRAL 163 (464)
T ss_dssp HHHHHHCCCTT--------CEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHH
T ss_pred HHHHhcCcCCC--------CEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHh
Confidence 34455555555 7999999999999999998743335799999999999888765 66666666676665
Q ss_pred C-CCCCCccEEEec----c-ccc--------cccc--------cHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 275 P-YPSLSFDMVHCA----Q-CGI--------IWDK--------KEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 275 p-~~~~sFDlV~~~----~-~~~--------~~~~--------~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
+ +.+++||+|++. . ..+ .|.. ....+|.++.++|||||++++++.....
T Consensus 164 ~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~ 234 (464)
T 3m6w_A 164 AEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP 234 (464)
T ss_dssp HHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG
T ss_pred hhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch
Confidence 5 346889999952 1 111 1111 1146899999999999999999876544
No 208
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.08 E-value=4.3e-10 Score=106.25 Aligned_cols=114 Identities=17% Similarity=0.202 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEE
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIG 267 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~ 267 (372)
+.+.+.+.+.+....+ .+|||+|||+|.++..++.. ....++++|+|+.+++.|+++ ++. +.+.
T Consensus 109 e~lv~~~l~~~~~~~~--------~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~ 178 (284)
T 1nv8_A 109 EELVELALELIRKYGI--------KTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVR 178 (284)
T ss_dssp HHHHHHHHHHHHHHTC--------CEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHHHHHHhcccCC--------CEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEE
Confidence 3455555555542222 68999999999999999987 346799999999999998865 553 6677
Q ss_pred EeeccCCCCCCCCc---cEEEeccccc-----------ccc-------ccHHHHHHHHH-hcccCCeEEEEEeC
Q 017377 268 NFISRQLPYPSLSF---DMVHCAQCGI-----------IWD-------KKEGIFLIEAD-RLLKPGGYFVLTSP 319 (372)
Q Consensus 268 ~~d~~~lp~~~~sF---DlV~~~~~~~-----------~~~-------~~~~~~L~el~-rvLkPGG~lvis~p 319 (372)
..|... +++ ++| |+|+++--.+ |.+ .+...+++++. +.|+|||.+++...
T Consensus 179 ~~D~~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 179 KGEFLE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp ESSTTG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred ECcchh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 666554 233 579 9999972111 110 11125899999 99999999999754
No 209
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.07 E-value=1.8e-09 Score=105.74 Aligned_cols=122 Identities=13% Similarity=0.053 Sum_probs=87.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccC-CCC-CCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQ-LPY-PSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~-lp~-~~~sFDlV~~~~~~ 290 (372)
.+|||+| |+|.++..++..+. ...++++|+++.+++.|+++ |+ ++.+...|+.. +|. .+++||+|+++..+
T Consensus 174 ~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 174 KDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp CEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 7899999 99999999988753 24689999999999988876 66 56777778777 664 45789999998543
Q ss_pred ccccccHHHHHHHHHhcccCCeE-EEEEeCCCCCCCCCCcchhhHHHHHHHHHHH-hcCeeEE
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGY-FVLTSPESKPRGSSSSRKNKSLLKVMEEFTE-KICWSLI 351 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~-lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~-~lcw~~~ 351 (372)
... ....++.++.++|+|||. ++++.... . .....|..+..+.. ..++...
T Consensus 252 ~~~--~~~~~l~~~~~~LkpgG~~~~~~~~~~-~-------~~~~~~~~~~~~l~~~~g~~~~ 304 (373)
T 2qm3_A 252 TLE--AIRAFVGRGIATLKGPRCAGYFGITRR-E-------SSLDKWREIQKLLLNEFNVVIT 304 (373)
T ss_dssp SHH--HHHHHHHHHHHTBCSTTCEEEEEECTT-T-------CCHHHHHHHHHHHHHTSCCEEE
T ss_pred chH--HHHHHHHHHHHHcccCCeEEEEEEecC-c-------CCHHHHHHHHHHHHHhcCcchh
Confidence 222 246789999999999994 45554431 1 12234555666655 6666553
No 210
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.07 E-value=7.4e-10 Score=108.53 Aligned_cols=118 Identities=20% Similarity=0.069 Sum_probs=85.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||+|||+|.++..++..+. ...++|+|+++.+++.|+++ |+ .+.+...|+..+++++++||+|+++-...
T Consensus 219 ~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 219 GSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYG 297 (373)
T ss_dssp CCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC
T ss_pred CEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCC
Confidence 7899999999999999998753 23589999999999988875 55 57788889999998889999999973321
Q ss_pred ccc------cc-HHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEee
Q 017377 292 IWD------KK-EGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 292 ~~~------~~-~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
... .+ ...++.++.++| ||.+++..+. ...++.+.+..+|+...+
T Consensus 298 ~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~---------------~~~~~~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 298 LKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE---------------KKAIEEAIAENGFEIIHH 349 (373)
T ss_dssp ------CCHHHHHHHHHHHHHHHE--EEEEEEEESC---------------HHHHHHHHHHTTEEEEEE
T ss_pred cccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC---------------HHHHHHHHHHcCCEEEEE
Confidence 110 11 245788999999 5555555442 123445567788887643
No 211
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.06 E-value=4.1e-10 Score=110.40 Aligned_cols=94 Identities=24% Similarity=0.279 Sum_probs=72.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHH----cCCC--eEEEEeeccCCCCCCCCccEEEeccc--
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALE----RGLP--AMIGNFISRQLPYPSLSFDMVHCAQC-- 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~----rgl~--~~~~~~d~~~lp~~~~sFDlV~~~~~-- 289 (372)
++|||||||+|.++..+++.|. ..|+++|.|+ +++.|++ +++. +.+...+++.+.+| +.||+|+|...
T Consensus 85 k~VLDvG~GtGiLs~~Aa~aGA--~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 85 KTVLDVGAGTGILSIFCAQAGA--RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHTTC--SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CEEEEeCCCccHHHHHHHHhCC--CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 7899999999999988888764 4689999996 6666654 4653 66777788888877 67999999522
Q ss_pred cccccccHHHHHHHHHhcccCCeEEE
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFV 315 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lv 315 (372)
..........++....|+|+|||.++
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccccchhhhHHHHHHhhCCCCceEC
Confidence 12222355678889999999999987
No 212
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.06 E-value=8.8e-10 Score=105.94 Aligned_cols=102 Identities=18% Similarity=0.138 Sum_probs=76.4
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEEeeccC-CCCCCCCccEEEe
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQ-LPYPSLSFDMVHC 286 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---------l~~~~~~~d~~~-lp~~~~sFDlV~~ 286 (372)
+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- ..+.+...|... ++..+++||+|++
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 3789999999999999998763 3467999999999999998762 135566665443 2234678999998
Q ss_pred ccccccccc--c--HHHHHHHHHhcccCCeEEEEEeCC
Q 017377 287 AQCGIIWDK--K--EGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 287 ~~~~~~~~~--~--~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
... .++.. . ...++.++.++|+|||.+++....
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 642 23321 1 156899999999999999998654
No 213
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.06 E-value=3.1e-10 Score=102.56 Aligned_cols=99 Identities=15% Similarity=0.087 Sum_probs=75.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCC-C-CC----CCCccEEE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQL-P-YP----SLSFDMVH 285 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~l-p-~~----~~sFDlV~ 285 (372)
.+|||||||+|.++..+++.......++++|+++.+++.|+++ ++ .+.+...++... + ++ .++||+|+
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~ 150 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAV 150 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEE
Confidence 7899999999999999998633346799999999999988865 44 356665554322 1 11 16899999
Q ss_pred eccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 286 ~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+... ..+...++.++.++|+|||.+++....
T Consensus 151 ~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 151 VDAD----KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp ECSC----STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred ECCC----HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 8643 244456899999999999999997643
No 214
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.06 E-value=4.8e-10 Score=106.96 Aligned_cols=102 Identities=14% Similarity=0.058 Sum_probs=75.2
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc---------CCCeEEEEeeccC-CCCCCCCccEEEe
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---------GLPAMIGNFISRQ-LPYPSLSFDMVHC 286 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r---------gl~~~~~~~d~~~-lp~~~~sFDlV~~ 286 (372)
+.+|||||||+|.++..++++. ....++++|+++.+++.|+++ ...+.+...|+.. ++..+++||+|++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 4799999999999999999874 346799999999999999875 2235666666543 3445688999999
Q ss_pred cccccccccc----HHHHHHHHHhcccCCeEEEEEeCC
Q 017377 287 AQCGIIWDKK----EGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 287 ~~~~~~~~~~----~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
... .++.+. ...++.++.++|+|||.+++....
T Consensus 175 d~~-~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 175 DSS-DPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp ECC------------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCC-CCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 633 333211 235899999999999999998643
No 215
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.06 E-value=2.4e-10 Score=100.66 Aligned_cols=97 Identities=19% Similarity=0.084 Sum_probs=68.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCce--------eEEEEeeCCHHHHHHHHHcCCCeEEE-EeeccCCC--------CCCCC
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMA--------VCVAVYEATGSQVQLALERGLPAMIG-NFISRQLP--------YPSLS 280 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~--------~~v~gvD~s~~~v~~A~~rgl~~~~~-~~d~~~lp--------~~~~s 280 (372)
.+|||||||+|.++..+++..... ..++++|+++.+ ....+.+. ..|....+ +++++
T Consensus 24 ~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (196)
T 2nyu_A 24 LRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDPRTSQRILEVLPGRR 97 (196)
T ss_dssp CEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSHHHHHHHHHHSGGGC
T ss_pred CEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCHHHHHHHHHhcCCCC
Confidence 789999999999999999873221 579999999842 01134455 45544332 34568
Q ss_pred ccEEEeccccc---cccccH-------HHHHHHHHhcccCCeEEEEEeCC
Q 017377 281 FDMVHCAQCGI---IWDKKE-------GIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 281 FDlV~~~~~~~---~~~~~~-------~~~L~el~rvLkPGG~lvis~p~ 320 (372)
||+|+|..+.. ++..+. ..++.++.++|||||.+++.+..
T Consensus 98 fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 98 ADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 99999964322 222222 36899999999999999998763
No 216
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.06 E-value=6.2e-10 Score=104.61 Aligned_cols=102 Identities=15% Similarity=0.111 Sum_probs=76.7
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC------C---CeEEEEeeccC-CCCCCCCccEEEe
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG------L---PAMIGNFISRQ-LPYPSLSFDMVHC 286 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg------l---~~~~~~~d~~~-lp~~~~sFDlV~~ 286 (372)
+.+|||||||+|.++..++++. ....++++|+++.+++.|+++- . .+.+...|+.. ++..+++||+|++
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 4799999999999999998762 2367999999999999998752 2 35666666543 3334688999999
Q ss_pred cccccccccc----HHHHHHHHHhcccCCeEEEEEeCC
Q 017377 287 AQCGIIWDKK----EGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 287 ~~~~~~~~~~----~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
... .++... ...++.++.++|+|||.+++....
T Consensus 155 d~~-~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 155 DST-EPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp SCS-SCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCC
T ss_pred CCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 643 333221 245899999999999999998643
No 217
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.05 E-value=7.2e-10 Score=105.27 Aligned_cols=102 Identities=17% Similarity=0.064 Sum_probs=74.9
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEEeeccC-CCCCCCCccEEEe
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQ-LPYPSLSFDMVHC 286 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---------l~~~~~~~d~~~-lp~~~~sFDlV~~ 286 (372)
+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- ..+.+...|+.. ++..+++||+|++
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 3789999999999999999873 2367999999999999988752 245666666543 3444678999998
Q ss_pred cccccc-ccc----cHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 287 AQCGII-WDK----KEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 287 ~~~~~~-~~~----~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
... .+ ... ....++.++.++|+|||.+++....
T Consensus 170 d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 170 DST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp EC-----------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred cCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 632 23 111 1246899999999999999998643
No 218
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.04 E-value=1.7e-08 Score=89.69 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=82.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||+|||+|.++..+++.+. ..++++|+++.+++.|+++ ++.+.+...|...++ ++||+|+++......
T Consensus 51 ~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 51 KVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp CEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSS
T ss_pred CEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccc
Confidence 7899999999999999998753 3689999999999999876 346677777777764 489999998664444
Q ss_pred c-ccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEe
Q 017377 294 D-KKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (372)
Q Consensus 294 ~-~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~ 352 (372)
. .....++.++.++| ||.+++..++ ....+.+..+.+..++++..
T Consensus 126 ~~~~~~~~l~~~~~~l--~~~~~~~~~~------------~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 126 RKHADRPFLLKAFEIS--DVVYSIHLAK------------PEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp STTTTHHHHHHHHHHC--SEEEEEEECC------------HHHHHHHHHHHHHTTEEEEE
T ss_pred cCCchHHHHHHHHHhc--CcEEEEEeCC------------cCCHHHHHHHHHHCCCeEEE
Confidence 3 22345888999998 6654443221 12233445556777776654
No 219
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.04 E-value=2.4e-09 Score=98.04 Aligned_cols=119 Identities=15% Similarity=0.101 Sum_probs=90.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..++..+. ...++++|+++.+++.|+++ ++. +.+...|......++..||+|+..+..-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg 101 (230)
T 3lec_A 23 ARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGG 101 (230)
T ss_dssp EEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCch
Confidence 6899999999999999998864 45799999999999998875 553 6666666655555545799988654311
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
+-...+|.+..+.|+++|+|+++.... ...+..+....+|.+....
T Consensus 102 ---~lI~~IL~~~~~~l~~~~~lIlqp~~~--------------~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 102 ---RLIADILNNDIDKLQHVKTLVLQPNNR--------------EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp ---HHHHHHHHHTGGGGTTCCEEEEEESSC--------------HHHHHHHHHHTTEEEEEEE
T ss_pred ---HHHHHHHHHHHHHhCcCCEEEEECCCC--------------hHHHHHHHHHCCCEEEEEE
Confidence 223458889999999999999986411 3456777788899988654
No 220
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.03 E-value=9.1e-10 Score=109.86 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=86.7
Q ss_pred HHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccC
Q 017377 198 RQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQ 273 (372)
Q Consensus 198 ~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~ 273 (372)
..+...+...++ .+|||+|||+|..+..+++.... ..++++|+++.+++.++++ ++++.+...|...
T Consensus 236 ~~~~~~l~~~~g--------~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~ 306 (429)
T 1sqg_A 236 QGCMTWLAPQNG--------EHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY 306 (429)
T ss_dssp HTHHHHHCCCTT--------CEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC
T ss_pred HHHHHHcCCCCc--------CeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhh
Confidence 344555555554 78999999999999999987533 6799999999999887765 6677777777776
Q ss_pred CC--CCCCCccEEEec----c-ccccccccH----------------HHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 274 LP--YPSLSFDMVHCA----Q-CGIIWDKKE----------------GIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 274 lp--~~~~sFDlV~~~----~-~~~~~~~~~----------------~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
++ +++++||+|++. . ..++..++. ..+|.++.++|||||++++++.....
T Consensus 307 ~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~ 379 (429)
T 1sqg_A 307 PSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLP 379 (429)
T ss_dssp THHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCG
T ss_pred chhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCh
Confidence 65 566899999962 1 111111221 36899999999999999999875543
No 221
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.03 E-value=6.7e-10 Score=106.48 Aligned_cols=101 Identities=15% Similarity=0.025 Sum_probs=73.4
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEEeeccC-CCCCCCCccEEEe
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQ-LPYPSLSFDMVHC 286 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---------l~~~~~~~d~~~-lp~~~~sFDlV~~ 286 (372)
+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- ..+.+...|+.. ++..+++||+|++
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 3789999999999999998763 3467999999999999998762 135566555543 2335688999998
Q ss_pred ccccccccccH----HHHHHHHHhcccCCeEEEEEeC
Q 017377 287 AQCGIIWDKKE----GIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 287 ~~~~~~~~~~~----~~~L~el~rvLkPGG~lvis~p 319 (372)
... .++.+.. ..++.++.++|+|||.+++...
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~ 223 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQGE 223 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEECC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC
Confidence 643 3332221 4689999999999999999863
No 222
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.03 E-value=3.8e-10 Score=108.11 Aligned_cols=101 Identities=19% Similarity=0.121 Sum_probs=77.3
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC----------CCeEEEEeeccC-CCCCCCCccEEE
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG----------LPAMIGNFISRQ-LPYPSLSFDMVH 285 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg----------l~~~~~~~d~~~-lp~~~~sFDlV~ 285 (372)
+.+|||||||+|.++..+++.. ....++++|+++.+++.|+++- ..+.+...|+.. ++..+++||+|+
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 4799999999999999998863 3467999999999999998652 235666666554 344568899999
Q ss_pred eccccccc---cc--c--HHHHHHHHHhcccCCeEEEEEeC
Q 017377 286 CAQCGIIW---DK--K--EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 286 ~~~~~~~~---~~--~--~~~~L~el~rvLkPGG~lvis~p 319 (372)
+... .++ .+ . ...++.++.++|+|||.+++...
T Consensus 157 ~d~~-~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 196 (314)
T 1uir_A 157 IDLT-DPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG 196 (314)
T ss_dssp EECC-CCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ECCC-CcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9744 444 21 1 24689999999999999999754
No 223
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.02 E-value=1.4e-09 Score=107.11 Aligned_cols=125 Identities=12% Similarity=0.108 Sum_probs=88.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC---CeEEEEeeccC-CCC---CCCCccEEEe
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL---PAMIGNFISRQ-LPY---PSLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl---~~~~~~~d~~~-lp~---~~~sFDlV~~ 286 (372)
.+|||+|||+|.++..++..+. ..|+++|+|+.+++.|+++ ++ ++.+...|+.. ++. ..++||+|++
T Consensus 214 ~~VLDl~cGtG~~sl~la~~ga--~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 214 KTVLNLFSYTAAFSVAAAMGGA--MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp CEEEEETCTTTHHHHHHHHTTB--SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEeeccCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 7899999999999999998652 3689999999999988765 55 46677766544 221 2458999998
Q ss_pred ccccc--------cccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEE
Q 017377 287 AQCGI--------IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLI 351 (372)
Q Consensus 287 ~~~~~--------~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~ 351 (372)
.--.. ........++.++.++|+|||+++++...... .....++.+...+...+++.+
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~-------~~~~~~~~i~~~~~~~g~~~~ 357 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM-------TVSQFKKQIEKGFGKQKHTYL 357 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-------CHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC-------CHHHHHHHHHHHHHHcCCcEE
Confidence 53221 11122345778889999999999999865433 233445666666677777733
No 224
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.02 E-value=9.2e-10 Score=102.82 Aligned_cols=92 Identities=14% Similarity=0.081 Sum_probs=72.6
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---------CCeEEEEeeccCCCCCCCCccEEEec
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------LPAMIGNFISRQLPYPSLSFDMVHCA 287 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---------l~~~~~~~d~~~lp~~~~sFDlV~~~ 287 (372)
+.+|||||||+|.++..++++ . ..++++|+++.+++.|+++- ..+.+...|..... ++||+|++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 479999999999999999887 3 67999999999999887642 23556655665543 789999986
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. .++..++.++.++|+|||.+++....
T Consensus 147 ~------~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 147 Q------EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp S------CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred C------CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 2 23334899999999999999997543
No 225
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.02 E-value=7.8e-10 Score=101.40 Aligned_cols=98 Identities=11% Similarity=-0.012 Sum_probs=75.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCC-C-C-----CCCCccEE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQL-P-Y-----PSLSFDMV 284 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~l-p-~-----~~~sFDlV 284 (372)
.+|||||||+|..+..+++.......++++|+++.+++.|+++ ++. +.+...++... + + ++++||+|
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I 151 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFG 151 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEE
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEE
Confidence 7899999999999999998743346799999999999988764 553 55665554432 2 1 25789999
Q ss_pred EeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 285 HCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 285 ~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
++.. +..+...++.++.++|+|||++++...
T Consensus 152 ~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 152 FVDA----DKPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EECS----CGGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EECC----chHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9863 234556789999999999999998754
No 226
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.02 E-value=2.9e-09 Score=98.26 Aligned_cols=118 Identities=16% Similarity=0.121 Sum_probs=87.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||||||+|.++..++..+. ...++++|+++.+++.|+++ ++. +.+...|......++..||+|++.+..-
T Consensus 23 ~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg 101 (244)
T 3gnl_A 23 ERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG 101 (244)
T ss_dssp EEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH
T ss_pred CEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCch
Confidence 6899999999999999998863 45799999999999999876 653 5666666555444444699998753311
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEee
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
+-...+|.+..+.|+++|+|+++... ....+..+....+|.+...
T Consensus 102 ---~lI~~IL~~~~~~L~~~~~lIlq~~~--------------~~~~lr~~L~~~Gf~i~~E 146 (244)
T 3gnl_A 102 ---TLIRTILEEGAAKLAGVTKLILQPNI--------------AAWQLREWSEQNNWLITSE 146 (244)
T ss_dssp ---HHHHHHHHHTGGGGTTCCEEEEEESS--------------CHHHHHHHHHHHTEEEEEE
T ss_pred ---HHHHHHHHHHHHHhCCCCEEEEEcCC--------------ChHHHHHHHHHCCCEEEEE
Confidence 22345889999999999999998541 1345677778889987543
No 227
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.02 E-value=2.1e-09 Score=106.12 Aligned_cols=122 Identities=18% Similarity=0.103 Sum_probs=83.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCC-CCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQL-PYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~l-p~~~~sFDlV~~~~~~~~ 292 (372)
.+|||+|||+|.++..++..+. .|+++|+|+.+++.|+++ ++...+...|+... +...+.||+|++.--.+.
T Consensus 216 ~~VLDlg~GtG~~sl~~a~~ga---~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 216 ERVLDVYSYVGGFALRAARKGA---YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp CEEEEESCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CeEEEcccchhHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 7899999999999999998753 289999999999988765 66655556665443 221344999998633211
Q ss_pred c--------cccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCee
Q 017377 293 W--------DKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWS 349 (372)
Q Consensus 293 ~--------~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~ 349 (372)
. ..+...++..+.++|+|||++++.+..... +.....+.+...+...+.+
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~-------~~~~f~~~v~~a~~~~g~~ 350 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHL-------RLEDLLEVARRAAADLGRR 350 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-------CHHHHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCC-------CHHHHHHHHHHHHHHhCCe
Confidence 1 123346888999999999999988765433 2223334445555544443
No 228
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.01 E-value=3.1e-09 Score=104.83 Aligned_cols=103 Identities=17% Similarity=0.050 Sum_probs=78.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC---CeEEEEeeccCCCC----CCCCccEEEe
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL---PAMIGNFISRQLPY----PSLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl---~~~~~~~d~~~lp~----~~~sFDlV~~ 286 (372)
.+|||+|||+|.++..++..+ ...++++|+++.+++.|+++ ++ ++.+...|+..... .+++||+|++
T Consensus 222 ~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 222 KRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp CEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 789999999999999999875 24699999999999988765 66 46677766654321 1468999999
Q ss_pred cccc--------ccccccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 287 AQCG--------IIWDKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 287 ~~~~--------~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
.--. .........++.++.++|+|||+++++.....
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 343 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGL 343 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 6321 11113445789999999999999999886543
No 229
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.01 E-value=2e-09 Score=108.82 Aligned_cols=106 Identities=20% Similarity=0.247 Sum_probs=79.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCCC-CCCCccEEEec----
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLPY-PSLSFDMVHCA---- 287 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp~-~~~sFDlV~~~---- 287 (372)
.+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+ ++.+...|+..++. .+++||.|++.
T Consensus 119 ~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcS 198 (479)
T 2frx_A 119 QRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCS 198 (479)
T ss_dssp SEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCC
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcC
Confidence 7899999999999999998633335799999999999888765 65 46667777766653 46789999972
Q ss_pred c-ccc--------cccc--------cHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 288 Q-CGI--------IWDK--------KEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 288 ~-~~~--------~~~~--------~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
. ..+ +|.. ....+|.++.++|||||++++++.....
T Consensus 199 g~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~ 251 (479)
T 2frx_A 199 GEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQ 251 (479)
T ss_dssp CGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSS
T ss_pred CcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCc
Confidence 1 111 1211 1235899999999999999999876554
No 230
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.99 E-value=4e-10 Score=103.79 Aligned_cols=100 Identities=12% Similarity=0.130 Sum_probs=65.9
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCC---CCC---CCCccEE
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQL---PYP---SLSFDMV 284 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~l---p~~---~~sFDlV 284 (372)
..+|||+|||+|.++..++.+. ....++++|+++.+++.|+++ ++. +.+...|+... +++ +++||+|
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 3689999999999999888762 235799999999999988865 443 66776665542 454 3689999
Q ss_pred Eecccccccc--------------ccHHHHHHHHHhcccCCeEEEEE
Q 017377 285 HCAQCGIIWD--------------KKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 285 ~~~~~~~~~~--------------~~~~~~L~el~rvLkPGG~lvis 317 (372)
+|+-..++.. .....++.++.++|||||.+.+.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 9984433221 01113456677777777766543
No 231
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.99 E-value=1.8e-09 Score=101.96 Aligned_cols=108 Identities=19% Similarity=0.098 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEE
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIG 267 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~ 267 (372)
....+.+.+.+...++ .+|||||||+|.++..|++.+ ..++++|+++.+++.++++ +. ++.+.
T Consensus 14 ~~i~~~i~~~~~~~~~--------~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 82 (285)
T 1zq9_A 14 PLIINSIIDKAALRPT--------DVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPVASKLQVL 82 (285)
T ss_dssp HHHHHHHHHHTCCCTT--------CEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEE
T ss_pred HHHHHHHHHhcCCCCC--------CEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEE
Confidence 4566777777766554 789999999999999999885 3689999999999998876 22 46677
Q ss_pred EeeccCCCCCCCCccEEEeccccccccccHH-HHH--------------HHH--HhcccCCeEEE
Q 017377 268 NFISRQLPYPSLSFDMVHCAQCGIIWDKKEG-IFL--------------IEA--DRLLKPGGYFV 315 (372)
Q Consensus 268 ~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~~-~~L--------------~el--~rvLkPGG~lv 315 (372)
..|+..++++ +||+|+++.. +++..+.. .+| +|+ +++|+|||.++
T Consensus 83 ~~D~~~~~~~--~fD~vv~nlp-y~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 83 VGDVLKTDLP--FFDTCVANLP-YQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp ESCTTTSCCC--CCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred Ecceecccch--hhcEEEEecC-cccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 7787777765 7999999743 55533221 222 233 36999999653
No 232
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.99 E-value=2.1e-09 Score=101.17 Aligned_cols=99 Identities=14% Similarity=0.039 Sum_probs=73.7
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---------------CCeEEEEeeccC-CCCCCCC
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---------------LPAMIGNFISRQ-LPYPSLS 280 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---------------l~~~~~~~d~~~-lp~~~~s 280 (372)
+.+|||||||+|.++..+++. ....++++|+++.+++.|+++- ..+.+...|+.. ++. +++
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 378999999999999999987 3467999999999999998752 124555555433 222 578
Q ss_pred ccEEEecccccccccc----HHHHHHHHHhcccCCeEEEEEeC
Q 017377 281 FDMVHCAQCGIIWDKK----EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 281 FDlV~~~~~~~~~~~~----~~~~L~el~rvLkPGG~lvis~p 319 (372)
||+|++... .++... ...++.++.++|+|||.+++...
T Consensus 153 fD~Ii~d~~-~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 153 FDVIIADST-DPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp EEEEEEECC-CCC-----TTSHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eeEEEECCC-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 999999743 333221 14589999999999999999754
No 233
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.98 E-value=2.6e-10 Score=108.92 Aligned_cols=98 Identities=17% Similarity=0.148 Sum_probs=66.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeC----CHHHHHHHHHc--CCC-eEEEEe-eccCCCCCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEA----TGSQVQLALER--GLP-AMIGNF-ISRQLPYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~----s~~~v~~A~~r--gl~-~~~~~~-d~~~lp~~~~sFDlV~~~~~ 289 (372)
.+|||||||+|.++..+++++ .|+++|+ ++.+++.+... +.+ +.+... |...+ +.++||+|+|..+
T Consensus 84 ~~VLDlGcG~G~~s~~la~~~----~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l--~~~~fD~V~sd~~ 157 (305)
T 2p41_A 84 GKVVDLGCGRGGWSYYCGGLK----NVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFI--PPERCDTLLCDIG 157 (305)
T ss_dssp EEEEEETCTTSHHHHHHHTST----TEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTS--CCCCCSEEEECCC
T ss_pred CEEEEEcCCCCHHHHHHHhcC----CEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccC--CcCCCCEEEECCc
Confidence 689999999999999999872 4788898 45433221111 112 455555 55544 4678999999755
Q ss_pred cc--cccccHH---HHHHHHHhcccCCeEEEEEeCCC
Q 017377 290 GI--IWDKKEG---IFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 290 ~~--~~~~~~~---~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.. ++..+.. .+|.++.++|||||.|++..+..
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 32 2222222 47899999999999999976643
No 234
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.98 E-value=6.3e-09 Score=94.95 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=86.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCC-CccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSL-SFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~-sFDlV~~~~~~ 290 (372)
.+|||||||+|.++..++..+. ...++++|+++.+++.|+++ ++. +.+...|... +++.+ .||+|+.++..
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~IviaG~G 94 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAGMG 94 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEEEcCCC
Confidence 6899999999999999998864 46799999999999988865 553 5555555421 23333 69999876431
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEeee
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQ 354 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~ 354 (372)
..-...+|.+....|+|+|+|+++.. .. ...+..+....+|.+....
T Consensus 95 ---g~~i~~Il~~~~~~L~~~~~lVlq~~-~~-------------~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 95 ---GRLIARILEEGLGKLANVERLILQPN-NR-------------EDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp ---HHHHHHHHHHTGGGCTTCCEEEEEES-SC-------------HHHHHHHHHHTTEEEEEEE
T ss_pred ---hHHHHHHHHHHHHHhCCCCEEEEECC-CC-------------HHHHHHHHHHCCCEEEEEE
Confidence 12234689999999999999999754 11 2456777788899888663
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.97 E-value=1.2e-09 Score=97.09 Aligned_cols=93 Identities=17% Similarity=0.077 Sum_probs=66.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCC-----------CCCccEEEe
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYP-----------SLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~-----------~~sFDlV~~ 286 (372)
.+|||+|||+|.++..++++ ...|+|+|+++.. ....+.+...|+...+.. .++||+|+|
T Consensus 27 ~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vls 97 (191)
T 3dou_A 27 DAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVS 97 (191)
T ss_dssp CEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEE
T ss_pred CEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEec
Confidence 79999999999999999987 3569999998742 112456666676665421 148999999
Q ss_pred ccccc---ccccc-------HHHHHHHHHhcccCCeEEEEEeC
Q 017377 287 AQCGI---IWDKK-------EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 287 ~~~~~---~~~~~-------~~~~L~el~rvLkPGG~lvis~p 319 (372)
..... ++..+ ...++.++.++|||||.|++...
T Consensus 98 d~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 98 DAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp CCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 63211 11111 23578899999999999998876
No 236
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.96 E-value=2.9e-09 Score=104.61 Aligned_cols=102 Identities=23% Similarity=0.163 Sum_probs=77.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEEeeccCCCC----CCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNFISRQLPY----PSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-~~~~~~d~~~lp~----~~~sFDlV~~~~ 288 (372)
.+|||+|||+|.++..++.. ...++++|+++.+++.|+++ ++. +.+...|+..... .+++||+|++.-
T Consensus 211 ~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 68999999999999999986 46799999999999988865 554 6666666554321 257899999953
Q ss_pred ccccc--------cccHHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 289 CGIIW--------DKKEGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 289 ~~~~~--------~~~~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
-.... ......++.++.++|+|||.++++.....
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 22111 13334689999999999999999987543
No 237
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.95 E-value=2.8e-09 Score=107.06 Aligned_cols=136 Identities=17% Similarity=0.190 Sum_probs=91.0
Q ss_pred HHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC-eEEEEeeccC
Q 017377 199 QIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP-AMIGNFISRQ 273 (372)
Q Consensus 199 ~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~-~~~~~~d~~~ 273 (372)
.+...+...++ .+|||+|||+|..+..+++.......|+++|+++.+++.++++ |+. +.+...|...
T Consensus 96 l~~~~L~~~~g--------~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~ 167 (456)
T 3m4x_A 96 IVGTAAAAKPG--------EKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAE 167 (456)
T ss_dssp HHHHHHCCCTT--------CEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHH
T ss_pred HHHHHcCCCCC--------CEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHH
Confidence 34455555555 7999999999999999987622335699999999999887765 654 5566666655
Q ss_pred CC-CCCCCccEEEeccc-----ccc--------ccc--------cHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcch
Q 017377 274 LP-YPSLSFDMVHCAQC-----GII--------WDK--------KEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRK 331 (372)
Q Consensus 274 lp-~~~~sFDlV~~~~~-----~~~--------~~~--------~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e 331 (372)
++ +.+++||+|++.-- .+. |.. ....+|.++.++|||||++++++...... |
T Consensus 168 l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~e------E 241 (456)
T 3m4x_A 168 LVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAPE------E 241 (456)
T ss_dssp HHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCGG------G
T ss_pred hhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecccc------c
Confidence 54 34578999997411 111 111 11257999999999999999998865441 2
Q ss_pred hhHHHHHHHHHHHhcCeeEE
Q 017377 332 NKSLLKVMEEFTEKICWSLI 351 (372)
Q Consensus 332 ~~~~w~~i~~l~~~lcw~~~ 351 (372)
. -+.++.+.++..+++.
T Consensus 242 n---e~vv~~~l~~~~~~l~ 258 (456)
T 3m4x_A 242 N---EEIISWLVENYPVTIE 258 (456)
T ss_dssp T---HHHHHHHHHHSSEEEE
T ss_pred C---HHHHHHHHHhCCCEEE
Confidence 2 2334555555555544
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.95 E-value=3e-09 Score=104.86 Aligned_cols=104 Identities=20% Similarity=0.074 Sum_probs=78.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCC----CCCCccEEEec
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPY----PSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~----~~~sFDlV~~~ 287 (372)
.+|||+|||+|.++..++..+ ...++++|+++.+++.|+++ ++ ++.+...|+..... ++++||+|++.
T Consensus 219 ~~VLDl~~G~G~~~~~la~~g--~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 219 DRVLDVFTYTGGFAIHAAIAG--ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp CEEEETTCTTTHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CeEEEecCCCCHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 789999999999999999874 24689999999999988765 55 46677666654321 25789999996
Q ss_pred cccccc--------cccHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 288 QCGIIW--------DKKEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 288 ~~~~~~--------~~~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
--.... ......++.++.++|+|||.+++++.....
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 340 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHV 340 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCC
Confidence 322111 133456889999999999999999875543
No 239
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.94 E-value=1.7e-09 Score=99.35 Aligned_cols=97 Identities=10% Similarity=-0.044 Sum_probs=74.0
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+.+|||||||+|.++..+. ....++++|+++.+++.++++ +.+..+...|....+.+ ++||+|++.-+++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh 179 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLP 179 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHH
T ss_pred CCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHH
Confidence 34799999999999999887 336799999999999988875 66677777777766655 5899999987766
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEE
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis 317 (372)
+........+.++...|+++|.++-.
T Consensus 180 ~LE~q~~~~~~~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 180 LLEREQAGSAMALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHHHSTTHHHHHHHHCBCSEEEEEE
T ss_pred HhhhhchhhHHHHHHHhcCCCEEEEc
Confidence 66322223444888899999765543
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.93 E-value=4.3e-09 Score=101.74 Aligned_cols=103 Identities=18% Similarity=0.218 Sum_probs=78.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCc----eeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLM----AVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~----~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~ 289 (372)
.+|||+|||+|.++..+++.... ...++|+|+++.+++.|+.+ ++.+.+...|+.. +.+.+.||+|+++-.
T Consensus 132 ~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~-~~~~~~fD~Ii~NPP 210 (344)
T 2f8l_A 132 VSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLA-NLLVDPVDVVISDLP 210 (344)
T ss_dssp EEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTS-CCCCCCEEEEEEECC
T ss_pred CEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCC-ccccCCccEEEECCC
Confidence 68999999999999988876321 26799999999999988864 6666777666544 335678999999855
Q ss_pred ccccccc----------------H-HHHHHHHHhcccCCeEEEEEeCCC
Q 017377 290 GIIWDKK----------------E-GIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 290 ~~~~~~~----------------~-~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+.++..+ . ..++.++.+.|+|||++++..|+.
T Consensus 211 fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 211 VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 3333211 1 147999999999999999998754
No 241
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.91 E-value=3.9e-09 Score=100.37 Aligned_cols=105 Identities=17% Similarity=0.192 Sum_probs=74.5
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEE
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGN 268 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~ 268 (372)
....+.+.+.+....+ .+|||||||+|.++..|++.+ ..++++|+++.+++.|+++ +. ++.+..
T Consensus 28 ~~i~~~i~~~~~~~~~--------~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~ 96 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSS--------DIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEGYNNLEVYE 96 (299)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTTCCCEEC--
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEE
Confidence 4566777777766555 789999999999999999874 4699999999999988865 33 456666
Q ss_pred eeccCCCCCCCCccEEEeccccccccccH-HHHH---------------HHHHhcccCCe
Q 017377 269 FISRQLPYPSLSFDMVHCAQCGIIWDKKE-GIFL---------------IEADRLLKPGG 312 (372)
Q Consensus 269 ~d~~~lp~~~~sFDlV~~~~~~~~~~~~~-~~~L---------------~el~rvLkPGG 312 (372)
.|+..+++ .+||+|+++.. +++.... ..++ ..+.|+++|+|
T Consensus 97 ~D~~~~~~--~~~D~Vv~n~p-y~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 97 GDAIKTVF--PKFDVCTANIP-YKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp --CCSSCC--CCCSEEEEECC-GGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred CchhhCCc--ccCCEEEEcCC-cccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 67766665 48999999743 5553322 2333 34678899887
No 242
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.90 E-value=4.8e-09 Score=97.30 Aligned_cols=100 Identities=11% Similarity=0.033 Sum_probs=76.9
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEecccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
+.+|||||||+|.++..++... ....++++|+++.+++.++++ |++..+...|...- .+.+.||+|+++-.+.+
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~-~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLED-RLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTS-CCCSCCSEEEETTCHHH
T ss_pred CceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeeccc-CCCCCcchHHHHHHHHH
Confidence 5799999999999999888764 347799999999999988765 77777776665433 46688999999987666
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
..+.....+-++...|+|+|.++-..
T Consensus 211 Le~q~kg~g~~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 211 LETQQRGSGWEVIDIVNSPNIVVTFP 236 (281)
T ss_dssp HHHHSTTHHHHHHHHSSCSEEEEEEE
T ss_pred hhhhhhHHHHHHHHHhCCCCEEEecc
Confidence 63332223339999999999876543
No 243
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.85 E-value=9e-09 Score=108.77 Aligned_cols=104 Identities=14% Similarity=0.122 Sum_probs=79.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC---eEEEEeeccC-CCCCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIGNFISRQ-LPYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~---~~~~~~d~~~-lp~~~~sFDlV~~~~~ 289 (372)
.+|||+|||+|.++..++..+. ..|+++|+|+.+++.|+++ ++. +.+...|+.. ++...++||+|++.--
T Consensus 541 ~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 541 KDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp CEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 6899999999999999998753 4689999999999988875 554 6677777654 3445688999999632
Q ss_pred c----------ccccccHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 290 G----------IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 290 ~----------~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
. .....+...++.++.++|+|||+++++......
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~ 662 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGF 662 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTC
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccc
Confidence 1 122234456899999999999999998875433
No 244
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.85 E-value=1.6e-08 Score=95.76 Aligned_cols=92 Identities=13% Similarity=-0.034 Sum_probs=64.2
Q ss_pred CeEEEeCC------CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEE-EEeeccCCCCCCCCccEEEecccc
Q 017377 218 QSVLDVGC------GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMI-GNFISRQLPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGC------G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~-~~~d~~~lp~~~~sFDlV~~~~~~ 290 (372)
.+|||+|| |+|+ ..+++.......|+|+|+++. + . .+.+ ...|+..++++ ++||+|+++..
T Consensus 65 ~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-----~--~v~~~i~gD~~~~~~~-~~fD~Vvsn~~- 132 (290)
T 2xyq_A 65 MRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-----S--DADSTLIGDCATVHTA-NKWDLIISDMY- 132 (290)
T ss_dssp CEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-----C--SSSEEEESCGGGCCCS-SCEEEEEECCC-
T ss_pred CEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-----C--CCEEEEECccccCCcc-CcccEEEEcCC-
Confidence 78999999 5576 344444222367999999987 2 2 3445 66777777765 78999999732
Q ss_pred cccc-----------ccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 291 IIWD-----------KKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 291 ~~~~-----------~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.++. .....++.++.++|||||.|++..+..
T Consensus 133 ~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~ 174 (290)
T 2xyq_A 133 DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 174 (290)
T ss_dssp CCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 2210 112368999999999999999987643
No 245
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.84 E-value=2.2e-08 Score=94.22 Aligned_cols=133 Identities=12% Similarity=0.106 Sum_probs=91.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||+|||+|.++..++..+. ..|+++|+++.+++.++++ ++. +.+.+.|+..++. .+.||.|+++.-
T Consensus 127 ~~VlD~~aG~G~~~i~~a~~g~--~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p-- 201 (278)
T 3k6r_A 127 ELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV-- 201 (278)
T ss_dssp CEEEETTCTTTTTTHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC--
T ss_pred CEEEEecCcCcHHHHHHHHhcC--CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCC--
Confidence 7899999999999999998853 4689999999999888765 553 5666777777653 578999998732
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEeeecceEEEEecC
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQDETFIWQKTV 364 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~~~~~iw~K~~ 364 (372)
.....+|..+.++|+|||.+.+........ ......+.++.+++..+++........+-+-.|.
T Consensus 202 ---~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~------~~~~~~e~i~~~~~~~g~~v~~~~~~~Vk~yaP~ 265 (278)
T 3k6r_A 202 ---VRTHEFIPKALSIAKDGAIIHYHNTVPEKL------MPREPFETFKRITKEYGYDVEKLNELKIKRYAPG 265 (278)
T ss_dssp ---SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG------TTTTTHHHHHHHHHHTTCEEEEEEEEEEEEETTT
T ss_pred ---CcHHHHHHHHHHHcCCCCEEEEEeeecccc------cchhHHHHHHHHHHHcCCcEEEEEEEEEEeECcC
Confidence 112247788889999999998765422110 0112234566677788887654443333344443
No 246
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.79 E-value=3e-08 Score=91.38 Aligned_cols=109 Identities=20% Similarity=0.179 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEee
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFI 270 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d 270 (372)
....+.+.+.+....+ .+|||||||+|.++..+++++ ..++++|+++.+++.++++. .++.+...|
T Consensus 16 ~~~~~~i~~~~~~~~~--------~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D 84 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEH--------DNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKD 84 (244)
T ss_dssp HHHHHHHHTTCCCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTCCSEEEECCC
T ss_pred HHHHHHHHHhCCCCCC--------CEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccCCCeEEEECh
Confidence 4556666666655444 789999999999999999886 56899999999999998763 246777888
Q ss_pred ccCCCCCC-CCccEEEeccccccccccH-----------HHHH----HHHHhcccCCeEEE
Q 017377 271 SRQLPYPS-LSFDMVHCAQCGIIWDKKE-----------GIFL----IEADRLLKPGGYFV 315 (372)
Q Consensus 271 ~~~lp~~~-~sFDlV~~~~~~~~~~~~~-----------~~~L----~el~rvLkPGG~lv 315 (372)
+..+++++ ..| .|+++- -+++.... ..++ ..+.|+++|||.+.
T Consensus 85 ~~~~~~~~~~~~-~vv~nl-Py~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l~ 143 (244)
T 1qam_A 85 ILQFKFPKNQSY-KIFGNI-PYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSLA 143 (244)
T ss_dssp GGGCCCCSSCCC-EEEEEC-CGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHHH
T ss_pred HHhCCcccCCCe-EEEEeC-CcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcchh
Confidence 88888874 456 455542 23321111 1122 33788888888543
No 247
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.79 E-value=7.9e-09 Score=102.01 Aligned_cols=115 Identities=23% Similarity=0.182 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ 273 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~ 273 (372)
....+.+.+.+....+ .+|||+|||+|.++..++++......++|+|+++.+++.| ..+.+...|...
T Consensus 25 ~~l~~~~~~~~~~~~~--------~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----~~~~~~~~D~~~ 92 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPRG--------GRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----PWAEGILADFLL 92 (421)
T ss_dssp HHHHHHHHHHCCCCTT--------CEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----TTEEEEESCGGG
T ss_pred HHHHHHHHHhhccCCC--------CEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----CCCcEEeCChhh
Confidence 4556677776654222 5899999999999999987521235799999999998777 345566666665
Q ss_pred CCCCCCCccEEEecccccc----------ccccH------------------HHHHHHHHhcccCCeEEEEEeCCC
Q 017377 274 LPYPSLSFDMVHCAQCGII----------WDKKE------------------GIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 274 lp~~~~sFDlV~~~~~~~~----------~~~~~------------------~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.+ +++.||+|+++--... ..++. ..++..+.++|+|||.+++..|..
T Consensus 93 ~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~ 167 (421)
T 2ih2_A 93 WE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPAT 167 (421)
T ss_dssp CC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGG
T ss_pred cC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChH
Confidence 54 3578999999622111 11111 146889999999999999998853
No 248
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.79 E-value=1.9e-10 Score=105.95 Aligned_cols=112 Identities=17% Similarity=0.160 Sum_probs=80.2
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEeec
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFIS 271 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d~ 271 (372)
...+.+.+.+....+ .+|||||||+|.++..+++.+ ..++++|+++.+++.|+++. .++.+...|.
T Consensus 16 ~~~~~i~~~~~~~~~--------~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~ 84 (245)
T 1yub_A 16 KVLNQIIKQLNLKET--------DTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDI 84 (245)
T ss_dssp TTHHHHHHHCCCCSS--------EEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCC
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhccCCceEEEECCh
Confidence 355667777765554 789999999999999999885 56999999999998887652 2356667788
Q ss_pred cCCCCCC-CCccEEEecccccccc-----------ccHHHHH----HHHHhcccCCeEEEEEeC
Q 017377 272 RQLPYPS-LSFDMVHCAQCGIIWD-----------KKEGIFL----IEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 272 ~~lp~~~-~sFDlV~~~~~~~~~~-----------~~~~~~L----~el~rvLkPGG~lvis~p 319 (372)
..+++++ ++| .|+++-- ++.. .....++ ..+.|+|+|||.+.+...
T Consensus 85 ~~~~~~~~~~f-~vv~n~P-y~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 85 LQFQFPNKQRY-KIVGNIP-YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp TTTTCCCSSEE-EEEEECC-SSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred hhcCcccCCCc-EEEEeCC-ccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 8888774 689 6777522 1111 1111233 669999999999876554
No 249
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.77 E-value=7.4e-08 Score=96.12 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEE
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGN 268 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~ 268 (372)
+.+.+.+.+.+....+ .+|||+|||+|.++..|++.+ ..++|+|+|+.+++.|+++ ++ ++.+..
T Consensus 272 e~l~~~~~~~l~~~~~--------~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~ 340 (433)
T 1uwv_A 272 QKMVARALEWLDVQPE--------DRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLNGLQNVTFYH 340 (433)
T ss_dssp HHHHHHHHHHHTCCTT--------CEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred HHHHHHHHHhhcCCCC--------CEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEE
Confidence 3455566666654443 689999999999999999873 5699999999999988764 44 466777
Q ss_pred eeccC----CCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 269 FISRQ----LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 269 ~d~~~----lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.|+.. +++++++||+|+++--.... ..++..+. .++|++.++++..
T Consensus 341 ~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~----~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 341 ENLEEDVTKQPWAKNGFDKVLLDPARAGA----AGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp CCTTSCCSSSGGGTTCCSEEEECCCTTCC----HHHHHHHH-HHCCSEEEEEESC
T ss_pred CCHHHHhhhhhhhcCCCCEEEECCCCccH----HHHHHHHH-hcCCCeEEEEECC
Confidence 77665 44667899999986332211 13455444 3789999888743
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.76 E-value=1e-07 Score=94.91 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=69.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+|||+|||+|.++..+++.+ ..++++|+++.+++.|+++ ++.+.+...|+..+.. .+||+|++.-.....
T Consensus 292 ~~VLDlgcG~G~~sl~la~~~---~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g~ 366 (425)
T 2jjq_A 292 EKILDMYSGVGTFGIYLAKRG---FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGFDTVIVDPPRAGL 366 (425)
T ss_dssp SEEEEETCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTTCS
T ss_pred CEEEEeeccchHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCCCEEEEcCCccch
Confidence 689999999999999999874 4699999999999988765 5566677777766542 289999996432111
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
...++..+. .|+|||.++++..
T Consensus 367 ---~~~~~~~l~-~l~p~givyvsc~ 388 (425)
T 2jjq_A 367 ---HPRLVKRLN-REKPGVIVYVSCN 388 (425)
T ss_dssp ---CHHHHHHHH-HHCCSEEEEEESC
T ss_pred ---HHHHHHHHH-hcCCCcEEEEECC
Confidence 123555554 5999999999853
No 251
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.75 E-value=2e-08 Score=96.89 Aligned_cols=92 Identities=15% Similarity=0.123 Sum_probs=73.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC--CeEEEEeeccCCCCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~ 291 (372)
.+|||+|||+|.++.. +. + ...++++|+++.+++.|+++ ++ .+.+...|+.... ++||+|++.--..
T Consensus 197 ~~VLDlg~G~G~~~l~-a~-~--~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~~ 269 (336)
T 2yx1_A 197 DVVVDMFAGVGPFSIA-CK-N--AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPKF 269 (336)
T ss_dssp CEEEETTCTTSHHHHH-TT-T--SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTTT
T ss_pred CEEEEccCccCHHHHh-cc-C--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcHh
Confidence 7899999999999999 76 3 35799999999999988765 54 4677777776665 7899999863211
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
...++.++.++|+|||.+++.+...
T Consensus 270 -----~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 270 -----AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp -----GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred -----HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 1258899999999999999987644
No 252
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.71 E-value=2.4e-08 Score=94.77 Aligned_cols=88 Identities=22% Similarity=0.120 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEee
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFI 270 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d 270 (372)
....+.+.+.+...++ .+|||||||+|.++..|++.+ ..++++|+++.+++.++++- .++.+...|
T Consensus 36 ~~i~~~Iv~~l~~~~~--------~~VLEIG~G~G~lT~~La~~~---~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD 104 (295)
T 3gru_A 36 KNFVNKAVESANLTKD--------DVVLEIGLGKGILTEELAKNA---KKVYVIEIDKSLEPYANKLKELYNNIEIIWGD 104 (295)
T ss_dssp HHHHHHHHHHTTCCTT--------CEEEEECCTTSHHHHHHHHHS---SEEEEEESCGGGHHHHHHHHHHCSSEEEEESC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEECCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHHhccCCCeEEEECc
Confidence 4567778888776665 789999999999999999874 56899999999999888762 457788888
Q ss_pred ccCCCCCCCCccEEEeccccccc
Q 017377 271 SRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 271 ~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
+..+++++.+||+|+++.. +++
T Consensus 105 ~l~~~~~~~~fD~Iv~NlP-y~i 126 (295)
T 3gru_A 105 ALKVDLNKLDFNKVVANLP-YQI 126 (295)
T ss_dssp TTTSCGGGSCCSEEEEECC-GGG
T ss_pred hhhCCcccCCccEEEEeCc-ccc
Confidence 8888888889999998843 444
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.70 E-value=3.6e-08 Score=98.69 Aligned_cols=117 Identities=20% Similarity=0.131 Sum_probs=83.9
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcC------------CceeEEEEeeCCHHHHHHHHHc--
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLK------------LMAVCVAVYEATGSQVQLALER-- 260 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~------------~~~~~v~gvD~s~~~v~~A~~r-- 260 (372)
...+.+.+.+....+ .+|||.|||+|.++..+++.- .....++|+|+++.+++.|+.+
T Consensus 158 ~v~~~mv~~l~~~~~--------~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 158 PLIQAMVDCINPQMG--------ETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp HHHHHHHHHHCCCTT--------CCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCC--------CEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 456677777754443 689999999999998887641 0124589999999999988764
Q ss_pred --CC---CeEEEEeeccCCCCCCCCccEEEecccccccc--cc--------------HHHHHHHHHhcccCCeEEEEEeC
Q 017377 261 --GL---PAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD--KK--------------EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 261 --gl---~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~--~~--------------~~~~L~el~rvLkPGG~lvis~p 319 (372)
++ ...+...|+...+.. ..||+|+++--+.+.. .. ...++..+.++|+|||++++..|
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 55 445666666655543 4899999984433211 10 13589999999999999999987
Q ss_pred C
Q 017377 320 E 320 (372)
Q Consensus 320 ~ 320 (372)
.
T Consensus 309 ~ 309 (445)
T 2okc_A 309 D 309 (445)
T ss_dssp H
T ss_pred C
Confidence 4
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.68 E-value=5e-08 Score=94.70 Aligned_cols=103 Identities=17% Similarity=0.043 Sum_probs=73.6
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC-------------CeEEEEeeccCCCC----CC
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL-------------PAMIGNFISRQLPY----PS 278 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl-------------~~~~~~~d~~~lp~----~~ 278 (372)
.+++|||||||+|.++..+++++. ..++.+|+++.+++.|++.-. .+.+...|+...-- ++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 468999999999999999998863 678999999999999998621 24455555443221 35
Q ss_pred CCccEEEeccccccccc-----cHHHHHHHH----HhcccCCeEEEEEeCC
Q 017377 279 LSFDMVHCAQCGIIWDK-----KEGIFLIEA----DRLLKPGGYFVLTSPE 320 (372)
Q Consensus 279 ~sFDlV~~~~~~~~~~~-----~~~~~L~el----~rvLkPGG~lvis~p~ 320 (372)
++||+|++...-..... ....+++.+ .++|+|||.+++....
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 78999998632212211 113456665 8999999999987653
No 255
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.58 E-value=2.5e-07 Score=90.97 Aligned_cols=102 Identities=12% Similarity=0.087 Sum_probs=74.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCc-------------------------------------eeEEEEeeCCHHHHHHHHHc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLM-------------------------------------AVCVAVYEATGSQVQLALER 260 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~-------------------------------------~~~v~gvD~s~~~v~~A~~r 260 (372)
.+|||+|||+|.++..++..+.. ...|+|+|+++.+++.|+++
T Consensus 197 ~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~N 276 (385)
T 3ldu_A 197 RVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAREN 276 (385)
T ss_dssp SCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHH
Confidence 78999999999999888765211 14699999999999998875
Q ss_pred ----CC--CeEEEEeeccCCCCCCCCccEEEeccccc-ccc--ccHHHHHHHHHhcccC--CeEEEEEeCC
Q 017377 261 ----GL--PAMIGNFISRQLPYPSLSFDMVHCAQCGI-IWD--KKEGIFLIEADRLLKP--GGYFVLTSPE 320 (372)
Q Consensus 261 ----gl--~~~~~~~d~~~lp~~~~sFDlV~~~~~~~-~~~--~~~~~~L~el~rvLkP--GG~lvis~p~ 320 (372)
++ .+.+...|..+++.+ .+||+|+++--.. ... ++...+..++.++|++ ||.+++.++.
T Consensus 277 a~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 277 AEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 66 367778888887765 5899999974321 111 2233566677777776 8888888774
No 256
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.58 E-value=3.2e-07 Score=90.46 Aligned_cols=102 Identities=10% Similarity=0.061 Sum_probs=73.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCc-------------------------------------eeEEEEeeCCHHHHHHHHHc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLM-------------------------------------AVCVAVYEATGSQVQLALER 260 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~-------------------------------------~~~v~gvD~s~~~v~~A~~r 260 (372)
..|||.+||+|+++..++..... ...|+|+|+++.+++.|+++
T Consensus 203 ~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~N 282 (393)
T 3k0b_A 203 RPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQN 282 (393)
T ss_dssp SCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHH
T ss_pred CeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHHH
Confidence 68999999999998877764221 14589999999999988865
Q ss_pred ----CCC--eEEEEeeccCCCCCCCCccEEEecccc-cccc--ccHHHHHHHHHhcccC--CeEEEEEeCC
Q 017377 261 ----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCG-IIWD--KKEGIFLIEADRLLKP--GGYFVLTSPE 320 (372)
Q Consensus 261 ----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~-~~~~--~~~~~~L~el~rvLkP--GG~lvis~p~ 320 (372)
|+. +.+...|+.+++.+ .+||+|+++--. .... .+...+..++.++||+ ||.+++.++.
T Consensus 283 a~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 283 AVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECC
T ss_pred HHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 553 67777888888765 589999998221 1111 1223455666666665 8888888774
No 257
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.57 E-value=4.4e-07 Score=89.17 Aligned_cols=117 Identities=14% Similarity=0.154 Sum_probs=81.1
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCc----------------------------------
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLM---------------------------------- 240 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~---------------------------------- 240 (372)
.+...+.......++ ..|||.+||+|++...++.....
T Consensus 181 ~LAaall~l~~~~~~--------~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~ 252 (384)
T 3ldg_A 181 NMAAAIILLSNWFPD--------KPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQAD 252 (384)
T ss_dssp HHHHHHHHHTTCCTT--------SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCCCC--------CeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhh
Confidence 344445544444443 68999999999998887754221
Q ss_pred ---eeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCCCCCCCCccEEEecccc-cccc--ccHHHHHHHHHhcc
Q 017377 241 ---AVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQLPYPSLSFDMVHCAQCG-IIWD--KKEGIFLIEADRLL 308 (372)
Q Consensus 241 ---~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~lp~~~~sFDlV~~~~~~-~~~~--~~~~~~L~el~rvL 308 (372)
...++|+|+++.+++.|+++ |+. +.+...|+.+++.+ .+||+|+++--. .... .+...+..++.+.|
T Consensus 253 ~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~l 331 (384)
T 3ldg_A 253 YDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETF 331 (384)
T ss_dssp TTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHH
T ss_pred ccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHH
Confidence 14599999999999988865 553 67778888888765 489999998221 1121 23345666677777
Q ss_pred cC--CeEEEEEeCC
Q 017377 309 KP--GGYFVLTSPE 320 (372)
Q Consensus 309 kP--GG~lvis~p~ 320 (372)
|+ ||.+++.++.
T Consensus 332 k~~~g~~~~iit~~ 345 (384)
T 3ldg_A 332 APLKTWSQFILTND 345 (384)
T ss_dssp TTCTTSEEEEEESC
T ss_pred hhCCCcEEEEEECC
Confidence 76 9999988774
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.57 E-value=1.3e-07 Score=87.84 Aligned_cols=82 Identities=16% Similarity=0.113 Sum_probs=66.2
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEee
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFI 270 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d 270 (372)
....+.+.+.+...++ .+|||||||+|.++..|++.+ ..++++|+++.+++.++++- .++.+...|
T Consensus 15 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D 83 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKT--------DTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQND 83 (255)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcc
Confidence 4567778888877665 789999999999999999875 46999999999999998762 357788888
Q ss_pred ccCCCCCC----CCccEEEec
Q 017377 271 SRQLPYPS----LSFDMVHCA 287 (372)
Q Consensus 271 ~~~lp~~~----~sFDlV~~~ 287 (372)
+..+++++ +.|| |+++
T Consensus 84 ~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 84 ALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp TTTCCGGGSCCSSCEE-EEEE
T ss_pred hHhCCHHHhccCCCeE-EEec
Confidence 88887653 5688 6666
No 259
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.52 E-value=3.3e-07 Score=85.36 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=66.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHH---cCCCeEEEEeeccCCCCCCCCccEEEecccc---c
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALE---RGLPAMIGNFISRQLPYPSLSFDMVHCAQCG---I 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~---rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~---~ 291 (372)
.+|||+|||+|.|+.+++++. ....+.++|++..+...... .+.++.....++....++++.||+|+|..+. .
T Consensus 76 ~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~ 154 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMNVQSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESSSS 154 (277)
T ss_dssp EEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCCSC
T ss_pred CEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccccCcCCCCeEEEeccceehhcCCCCccEEEecCccCcCc
Confidence 689999999999999988763 23557778887443111110 1223343333444456778899999997532 2
Q ss_pred cccccHH--HHHHHHHhcccCC-eEEEEEeCC
Q 017377 292 IWDKKEG--IFLIEADRLLKPG-GYFVLTSPE 320 (372)
Q Consensus 292 ~~~~~~~--~~L~el~rvLkPG-G~lvis~p~ 320 (372)
++.+... .+|..+.++|+|| |.|++....
T Consensus 155 ~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 155 SVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 2323322 3568889999999 999998775
No 260
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.51 E-value=9.5e-07 Score=84.30 Aligned_cols=115 Identities=10% Similarity=-0.031 Sum_probs=77.7
Q ss_pred HHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCC
Q 017377 200 IAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQL 274 (372)
Q Consensus 200 l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~l 274 (372)
+...+...++ .+|||+|||+|..+..+++.-.....|+++|+++.+++.++++ |+ ++.+...|...+
T Consensus 94 ~~~~l~~~~g--------~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~ 165 (309)
T 2b9e_A 94 PAMLLDPPPG--------SHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAV 165 (309)
T ss_dssp HHHHHCCCTT--------CEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGS
T ss_pred HHHHhCCCCC--------CEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhc
Confidence 3345555555 7899999999999999988521235699999999999887765 65 366777777666
Q ss_pred CCCC---CCccEEEec-----cccc-c-----c----c-cc-------HHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 275 PYPS---LSFDMVHCA-----QCGI-I-----W----D-KK-------EGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 275 p~~~---~sFDlV~~~-----~~~~-~-----~----~-~~-------~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
+... ++||.|++. .... . | . .+ ...+|..+.++|+ ||+++.++.....
T Consensus 166 ~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 166 SPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ 239 (309)
T ss_dssp CTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG
T ss_pred CccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh
Confidence 5432 579999972 1111 1 0 1 11 1246777888887 9999998875543
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.48 E-value=5.3e-07 Score=84.48 Aligned_cols=87 Identities=18% Similarity=0.102 Sum_probs=68.1
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC--CCeEEEEeec
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG--LPAMIGNFIS 271 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg--l~~~~~~~d~ 271 (372)
....+.+.+.+...+ . +|||||||+|.++..|++.+ ..++++|+++.+++.++++- .++.+...|+
T Consensus 33 ~~i~~~Iv~~~~~~~--------~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~ 100 (271)
T 3fut_A 33 EAHLRRIVEAARPFT--------G-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDA 100 (271)
T ss_dssp HHHHHHHHHHHCCCC--------S-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTTSSEEEEESCG
T ss_pred HHHHHHHHHhcCCCC--------C-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCCCCEEEEECCh
Confidence 456777777776533 2 79999999999999999986 45899999999999998863 3477788888
Q ss_pred cCCCCCCC-CccEEEeccccccc
Q 017377 272 RQLPYPSL-SFDMVHCAQCGIIW 293 (372)
Q Consensus 272 ~~lp~~~~-sFDlV~~~~~~~~~ 293 (372)
..+++++. .+|.|+++.- ++.
T Consensus 101 l~~~~~~~~~~~~iv~NlP-y~i 122 (271)
T 3fut_A 101 LLYPWEEVPQGSLLVANLP-YHI 122 (271)
T ss_dssp GGSCGGGSCTTEEEEEEEC-SSC
T ss_pred hhCChhhccCccEEEecCc-ccc
Confidence 88887653 6899998843 444
No 262
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.47 E-value=2.2e-07 Score=90.71 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=66.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-CeEEEEeeccCCC--CCC------------
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-PAMIGNFISRQLP--YPS------------ 278 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-~~~~~~~d~~~lp--~~~------------ 278 (372)
.+|||+|||+|.++..++... ..|+++|+++.+++.|+++ ++ ++.+...|+.++. +..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~ 291 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDL 291 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCG
T ss_pred CEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccc
Confidence 579999999999999998753 4699999999999988764 55 4566666554321 111
Q ss_pred --CCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 279 --LSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 279 --~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.+||+|++.--.. .+..++.+.|+++|.+++.+.+
T Consensus 292 ~~~~fD~Vv~dPPr~-------g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 292 KSYQCETIFVDPPRS-------GLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp GGCCEEEEEECCCTT-------CCCHHHHHHHTTSSEEEEEESC
T ss_pred ccCCCCEEEECcCcc-------ccHHHHHHHHhCCCEEEEEECC
Confidence 3799998752211 1345567777899998888764
No 263
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.43 E-value=3.4e-07 Score=86.16 Aligned_cols=86 Identities=10% Similarity=0.079 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCc-eeEEEEeeCCHHHHHHHHHc-CCCeEEEEeec
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLM-AVCVAVYEATGSQVQLALER-GLPAMIGNFIS 271 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~-~~~v~gvD~s~~~v~~A~~r-gl~~~~~~~d~ 271 (372)
....+.+.+.+....+ .+|||||||+|.++..|++.+.. ...++++|+++.+++.++++ ..++.+...|+
T Consensus 28 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~ 99 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERG--------ERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDA 99 (279)
T ss_dssp HHHHHHHHHHHCCCTT--------CEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCG
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECCh
Confidence 4567788888876665 78999999999999999987432 23489999999999999887 33567778888
Q ss_pred cCCCCCCC------CccEEEec
Q 017377 272 RQLPYPSL------SFDMVHCA 287 (372)
Q Consensus 272 ~~lp~~~~------sFDlV~~~ 287 (372)
..+++++- ..+.|++|
T Consensus 100 ~~~~~~~~~~~~~~~~~~vv~N 121 (279)
T 3uzu_A 100 LTFDFGSIARPGDEPSLRIIGN 121 (279)
T ss_dssp GGCCGGGGSCSSSSCCEEEEEE
T ss_pred hcCChhHhcccccCCceEEEEc
Confidence 88887542 23456665
No 264
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.36 E-value=2.2e-06 Score=79.21 Aligned_cols=84 Identities=20% Similarity=0.159 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-CCCeEEEEeecc
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAMIGNFISR 272 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-gl~~~~~~~d~~ 272 (372)
....+.+.+.+....+ .+|||||||+|.++..|++.+ ...++++|+++.+++.++++ ..++.+...|+.
T Consensus 17 ~~i~~~iv~~~~~~~~--------~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEG--------NTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSIGDERLEVINEDAS 86 (249)
T ss_dssp HHHHHHHHHHTTCCTT--------CEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTT
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhccCCCeEEEEcchh
Confidence 4567778887776555 789999999999999999874 25689999999999999887 224677778888
Q ss_pred CCCCCCCC-ccEEEec
Q 017377 273 QLPYPSLS-FDMVHCA 287 (372)
Q Consensus 273 ~lp~~~~s-FDlV~~~ 287 (372)
.+++++.. ...|+++
T Consensus 87 ~~~~~~~~~~~~vv~N 102 (249)
T 3ftd_A 87 KFPFCSLGKELKVVGN 102 (249)
T ss_dssp TCCGGGSCSSEEEEEE
T ss_pred hCChhHccCCcEEEEE
Confidence 88876432 2255555
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.35 E-value=6.9e-07 Score=91.61 Aligned_cols=118 Identities=15% Similarity=0.053 Sum_probs=81.6
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcC---C--------------ceeEEEEeeCCHHHHHHH
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLK---L--------------MAVCVAVYEATGSQVQLA 257 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~---~--------------~~~~v~gvD~s~~~v~~A 257 (372)
...+.+.+.+....+ .+|||.+||+|.|...+++.- . ....++|+|+++.+++.|
T Consensus 156 ~iv~~mv~~l~p~~~--------~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 156 PLIKTIIHLLKPQPR--------EVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp HHHHHHHHHHCCCTT--------CCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred HHHHHHHHHhccCCC--------CeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 345667777754443 689999999999988876541 0 123589999999999998
Q ss_pred HHc----CCC------eEEEEeeccCCC-CCCCCccEEEecccccccc-------------ccHHHHHHHHHhcccCCeE
Q 017377 258 LER----GLP------AMIGNFISRQLP-YPSLSFDMVHCAQCGIIWD-------------KKEGIFLIEADRLLKPGGY 313 (372)
Q Consensus 258 ~~r----gl~------~~~~~~d~~~lp-~~~~sFDlV~~~~~~~~~~-------------~~~~~~L~el~rvLkPGG~ 313 (372)
+.+ ++. ..+...|+...+ .+.+.||+|+++--+.... .....++..+.+.|+|||+
T Consensus 228 ~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr 307 (541)
T 2ar0_A 228 LMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGR 307 (541)
T ss_dssp HHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEE
T ss_pred HHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCE
Confidence 864 544 345555544332 3457899999973322110 1123588999999999999
Q ss_pred EEEEeCC
Q 017377 314 FVLTSPE 320 (372)
Q Consensus 314 lvis~p~ 320 (372)
+++..|+
T Consensus 308 ~a~V~p~ 314 (541)
T 2ar0_A 308 AAVVVPD 314 (541)
T ss_dssp EEEEEEH
T ss_pred EEEEecC
Confidence 9999874
No 266
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.35 E-value=1.6e-06 Score=85.27 Aligned_cols=97 Identities=15% Similarity=0.145 Sum_probs=72.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCC---eEEEEeeccCC-C-CCCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLP---AMIGNFISRQL-P-YPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~---~~~~~~d~~~l-p-~~~~sFDlV~~~~ 288 (372)
.+|||++||+|.++..++.+......|+++|+++.+++.++++ ++. +.+...|+..+ . ...+.||+|++.-
T Consensus 54 ~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP 133 (392)
T 3axs_A 54 VKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP 133 (392)
T ss_dssp EEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC
T ss_pred CEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC
Confidence 6899999999999999998632235799999999999988765 654 55666665332 1 1246799999873
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. .....++..+.+.|+|||+++++..
T Consensus 134 ----~-g~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 134 ----F-GTPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp ----S-SCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ----C-cCHHHHHHHHHHHhCCCCEEEEEec
Confidence 1 1123488889999999999988763
No 267
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.34 E-value=1.9e-06 Score=84.21 Aligned_cols=106 Identities=16% Similarity=0.206 Sum_probs=69.9
Q ss_pred CCeEEEeCCCCcHHHHHHHhc--------------CCceeEEEEeeCCHHHHHHH-HHc------------------CCC
Q 017377 217 VQSVLDVGCGFGSFGAHLVSL--------------KLMAVCVAVYEATGSQVQLA-LER------------------GLP 263 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~--------------~~~~~~v~gvD~s~~~v~~A-~~r------------------gl~ 263 (372)
..+|+|+|||+|..+..+++. ......|..-|...+..... +.. +.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 468999999999998887331 12356777778766553211 110 001
Q ss_pred eEEEEe-eccCCCCCCCCccEEEeccccccccc--------------------------------------cHHHHHHHH
Q 017377 264 AMIGNF-ISRQLPYPSLSFDMVHCAQCGIIWDK--------------------------------------KEGIFLIEA 304 (372)
Q Consensus 264 ~~~~~~-d~~~lp~~~~sFDlV~~~~~~~~~~~--------------------------------------~~~~~L~el 304 (372)
...++. +...-.||+++||+|+++.+ +||.. |...+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~a-LHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFS-LHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESC-TTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecce-eeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222 22334589999999999977 77743 223468889
Q ss_pred HhcccCCeEEEEEeCCCCC
Q 017377 305 DRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 305 ~rvLkPGG~lvis~p~~~~ 323 (372)
.+.|+|||.++++......
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHEEEEEEEEEEEEECCC
T ss_pred HHHhCCCCEEEEEEecCCC
Confidence 9999999999999876544
No 268
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.33 E-value=2.2e-06 Score=84.04 Aligned_cols=106 Identities=18% Similarity=0.177 Sum_probs=72.1
Q ss_pred CCeEEEeCCCCcHHHHHHHhc----------------CCceeEEEEeeCC-----------HHHHHHHHH-cC--CCeEE
Q 017377 217 VQSVLDVGCGFGSFGAHLVSL----------------KLMAVCVAVYEAT-----------GSQVQLALE-RG--LPAMI 266 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~----------------~~~~~~v~gvD~s-----------~~~v~~A~~-rg--l~~~~ 266 (372)
.-+|+|+||++|..+..+++. ......|..-|.. +.+.+.+.+ .| .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999998887764 1235778888887 444444333 23 23333
Q ss_pred EEe---eccCCCCCCCCccEEEeccccccccccHH---------------------------------------HHHHHH
Q 017377 267 GNF---ISRQLPYPSLSFDMVHCAQCGIIWDKKEG---------------------------------------IFLIEA 304 (372)
Q Consensus 267 ~~~---d~~~lp~~~~sFDlV~~~~~~~~~~~~~~---------------------------------------~~L~el 304 (372)
..+ +...-.||+++||+|+++.+ +||..+.. .+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYC-LHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESC-TTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecce-eeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 333 23345689999999999977 78842211 126666
Q ss_pred HhcccCCeEEEEEeCCCCC
Q 017377 305 DRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 305 ~rvLkPGG~lvis~p~~~~ 323 (372)
.+.|+|||.++++......
T Consensus 212 a~eL~pGG~mvl~~~gr~~ 230 (384)
T 2efj_A 212 SEELISRGRMLLTFICKED 230 (384)
T ss_dssp HHHEEEEEEEEEEEECCCT
T ss_pred HHHhccCCeEEEEEecCCC
Confidence 8999999999999887655
No 269
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.30 E-value=4.6e-06 Score=86.55 Aligned_cols=119 Identities=17% Similarity=0.132 Sum_probs=75.3
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHH---HHHHHhcCCceeEEEEeeCCHHHHHHHH----HcCCC--eE
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSF---GAHLVSLKLMAVCVAVYEATGSQVQLAL----ERGLP--AM 265 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~---~~~L~~~~~~~~~v~gvD~s~~~v~~A~----~rgl~--~~ 265 (372)
.|.+.|.+.+.......-.......|||||||+|.+ +...++++.....|.++|-++.+. .|+ +++.. +.
T Consensus 336 ~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~-~a~~~v~~N~~~dkVt 414 (637)
T 4gqb_A 336 QYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAV-VTLENWQFEEWGSQVT 414 (637)
T ss_dssp HHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHH-HHHHHHHHHTTGGGEE
T ss_pred HHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHH-HHHHHHHhccCCCeEE
Confidence 455566655532111011112335799999999988 444444444556789999998554 333 33443 67
Q ss_pred EEEeeccCCCCCCCCccEEEeccccccc-cccHHHHHHHHHhcccCCeEEE
Q 017377 266 IGNFISRQLPYPSLSFDMVHCAQCGIIW-DKKEGIFLIEADRLLKPGGYFV 315 (372)
Q Consensus 266 ~~~~d~~~lp~~~~sFDlV~~~~~~~~~-~~~~~~~L~el~rvLkPGG~lv 315 (372)
+...+++++..| +.+|+|++.-.-... .+-...+|...+|.|||||.++
T Consensus 415 VI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 415 VVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 777888888776 679999996321111 1222357788899999999876
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.27 E-value=4.4e-06 Score=88.19 Aligned_cols=118 Identities=18% Similarity=0.095 Sum_probs=78.2
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCC-----------------------------------
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKL----------------------------------- 239 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~----------------------------------- 239 (372)
.+...+.......++ ..|||.+||+|.++..++....
T Consensus 177 ~LAa~ll~~~~~~~~--------~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~ 248 (703)
T 3v97_A 177 TLAAAIVMRSGWQPG--------TPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRA 248 (703)
T ss_dssp HHHHHHHHHTTCCTT--------SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCC--------CeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHh
Confidence 344455555444433 6899999999999887765310
Q ss_pred ------ceeEEEEeeCCHHHHHHHHHc----CCC--eEEEEeeccCC--CCCCCCccEEEec--cccccccc--cHHH--
Q 017377 240 ------MAVCVAVYEATGSQVQLALER----GLP--AMIGNFISRQL--PYPSLSFDMVHCA--QCGIIWDK--KEGI-- 299 (372)
Q Consensus 240 ------~~~~v~gvD~s~~~v~~A~~r----gl~--~~~~~~d~~~l--p~~~~sFDlV~~~--~~~~~~~~--~~~~-- 299 (372)
....++|+|+++.+++.|+++ |+. +.+...|+..+ |..+++||+|+++ +. ..+.. +...
T Consensus 249 ~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG-~Rlg~~~~l~~ly 327 (703)
T 3v97_A 249 RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYG-ERLDSEPALIALH 327 (703)
T ss_dssp HHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCC-C---CCHHHHHHH
T ss_pred hhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCcc-ccccchhHHHHHH
Confidence 114699999999999988865 664 56777777776 4444589999998 32 11111 2222
Q ss_pred -HHHHHHhcccCCeEEEEEeCCC
Q 017377 300 -FLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 300 -~L~el~rvLkPGG~lvis~p~~ 321 (372)
.+.++.+.+.|||.+++.++..
T Consensus 328 ~~l~~~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 328 SLLGRIMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHHHHHHCTTCEEEEEESCH
T ss_pred HHHHHHHHhhCCCCeEEEEeCCH
Confidence 3445556666899999987743
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.24 E-value=1.3e-06 Score=83.12 Aligned_cols=85 Identities=12% Similarity=0.106 Sum_probs=64.9
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CCCeEEEEee
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GLPAMIGNFI 270 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl~~~~~~~d 270 (372)
...+.+.+.+...++ .+|||+|||+|.++..++++.. ...++++|.++.+++.|+++ +..+.+...+
T Consensus 13 vLl~e~l~~L~~~~g--------~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d 83 (301)
T 1m6y_A 13 VMVREVIEFLKPEDE--------KIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVS 83 (301)
T ss_dssp TTHHHHHHHHCCCTT--------CEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECC
T ss_pred HHHHHHHHhcCCCCC--------CEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 355667777776555 7899999999999999998743 46799999999999999876 2356677777
Q ss_pred ccCCC--CC---CCCccEEEecc
Q 017377 271 SRQLP--YP---SLSFDMVHCAQ 288 (372)
Q Consensus 271 ~~~lp--~~---~~sFDlV~~~~ 288 (372)
...++ ++ .++||.|++..
T Consensus 84 ~~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 84 YREADFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp GGGHHHHHHHTTCSCEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCCCEEEEcC
Confidence 66654 11 15799999853
No 272
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.23 E-value=1.4e-06 Score=85.52 Aligned_cols=95 Identities=20% Similarity=0.125 Sum_probs=69.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-------------------CCC-eEEEEeeccCCCC-
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER-------------------GLP-AMIGNFISRQLPY- 276 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-------------------gl~-~~~~~~d~~~lp~- 276 (372)
.+|||+|||+|.++..++.+.. ...|+++|+++.+++.++++ ++. +.+...|+..+..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 6899999999999999998732 24589999999999888754 444 5555555543321
Q ss_pred CCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 277 PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 277 ~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
..+.||+|++.- . .....++..+.+.|+|||.++++.
T Consensus 128 ~~~~fD~I~lDP----~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLDP----F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeCC----C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999642 1 112358889999999999988875
No 273
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.18 E-value=3.6e-06 Score=86.34 Aligned_cols=117 Identities=21% Similarity=0.109 Sum_probs=78.4
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCC--------------ceeEEEEeeCCHHHHHHHHHc
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKL--------------MAVCVAVYEATGSQVQLALER 260 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~--------------~~~~v~gvD~s~~~v~~A~~r 260 (372)
...+.|.+.+.... .+|||.+||+|.|...+++.-. ....++|+|+++.+++.|+.+
T Consensus 232 ~Vv~lmv~ll~p~~---------~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 232 SIVTLIVEMLEPYK---------GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp HHHHHHHHHHCCCS---------EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC---------CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 34555666554321 3899999999999877654200 136799999999999988864
Q ss_pred ----CCCeEE--EEeeccCCC-CCCCCccEEEeccccc--cccc--------------------------cHHHHHHHHH
Q 017377 261 ----GLPAMI--GNFISRQLP-YPSLSFDMVHCAQCGI--IWDK--------------------------KEGIFLIEAD 305 (372)
Q Consensus 261 ----gl~~~~--~~~d~~~lp-~~~~sFDlV~~~~~~~--~~~~--------------------------~~~~~L~el~ 305 (372)
|+...+ ...|+...+ +++..||+|+++--+. .|.. ..-.++..+.
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l 382 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHML 382 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHH
T ss_pred HHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHH
Confidence 554333 344443333 4568999999972211 1110 1125789999
Q ss_pred hcccCCeEEEEEeCC
Q 017377 306 RLLKPGGYFVLTSPE 320 (372)
Q Consensus 306 rvLkPGG~lvis~p~ 320 (372)
+.|+|||++++..|.
T Consensus 383 ~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 383 YHLAPTGSMALLLAN 397 (544)
T ss_dssp HTEEEEEEEEEEEET
T ss_pred HHhccCceEEEEecc
Confidence 999999999999875
No 274
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.17 E-value=1.3e-05 Score=82.04 Aligned_cols=122 Identities=21% Similarity=0.228 Sum_probs=82.9
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcC--CceeEEEEeeCCHHHHHHHHHc----CCC---eE
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLK--LMAVCVAVYEATGSQVQLALER----GLP---AM 265 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~--~~~~~v~gvD~s~~~v~~A~~r----gl~---~~ 265 (372)
...+.+.+.+..... .....+|||.+||+|.|...+++.- .....++|+|+++.++..|+.+ |+. ..
T Consensus 204 ~Vv~lmv~ll~~~~~----~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~ 279 (542)
T 3lkd_A 204 PVAKLMTQIAFLGRE----DKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQF 279 (542)
T ss_dssp HHHHHHHHHHHTTCT----TCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHHHHHhcccC----CCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccc
Confidence 345666666653110 0123689999999999988877651 1246799999999999988764 652 45
Q ss_pred EEEeeccCC--C-CCCCCccEEEecccc-cccc---------------------ccHHHHHHHHHhccc-CCeEEEEEeC
Q 017377 266 IGNFISRQL--P-YPSLSFDMVHCAQCG-IIWD---------------------KKEGIFLIEADRLLK-PGGYFVLTSP 319 (372)
Q Consensus 266 ~~~~d~~~l--p-~~~~sFDlV~~~~~~-~~~~---------------------~~~~~~L~el~rvLk-PGG~lvis~p 319 (372)
+...|+... | ++...||+|+++--+ ..|. ...-.++..+.+.|+ |||++.+..|
T Consensus 280 I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 280 LHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred eEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 666666554 3 456789999997111 1110 001247899999999 9999999988
Q ss_pred C
Q 017377 320 E 320 (372)
Q Consensus 320 ~ 320 (372)
.
T Consensus 360 ~ 360 (542)
T 3lkd_A 360 H 360 (542)
T ss_dssp T
T ss_pred c
Confidence 5
No 275
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.14 E-value=2.1e-06 Score=79.43 Aligned_cols=84 Identities=13% Similarity=0.033 Sum_probs=61.6
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC---CeEEEEee
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL---PAMIGNFI 270 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl---~~~~~~~d 270 (372)
....+.+.+.+...++ .+|||||||+|.++. +. ++ ....++++|+++.|++.++++.. ++.+...|
T Consensus 7 ~~i~~~iv~~~~~~~~--------~~VLEIG~G~G~lt~-l~-~~-~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D 75 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKG--------QAMVEIGPGLAALTE-PV-GE-RLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQD 75 (252)
T ss_dssp HHHHHHHHHHHCCCTT--------CCEEEECCTTTTTHH-HH-HT-TCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSC
T ss_pred HHHHHHHHHhcCCCCc--------CEEEEECCCCcHHHH-hh-hC-CCCeEEEEECCHHHHHHHHHHhccCCceEEEECc
Confidence 3566777777776555 789999999999999 64 33 21238999999999999988642 46777788
Q ss_pred ccCCCCCCC-----CccEEEecc
Q 017377 271 SRQLPYPSL-----SFDMVHCAQ 288 (372)
Q Consensus 271 ~~~lp~~~~-----sFDlV~~~~ 288 (372)
+..+++++. ..|.|+++-
T Consensus 76 ~~~~~~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 76 AMTFNFGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp GGGCCHHHHHHHHTSCEEEEEEC
T ss_pred hhhCCHHHhhcccCCceEEEECC
Confidence 888776532 346777763
No 276
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.13 E-value=5.3e-06 Score=77.04 Aligned_cols=69 Identities=20% Similarity=0.157 Sum_probs=53.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCH-------HHHHHHHHc----CC-C-eEEEEeeccCC-C-CCC--CC
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATG-------SQVQLALER----GL-P-AMIGNFISRQL-P-YPS--LS 280 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~-------~~v~~A~~r----gl-~-~~~~~~d~~~l-p-~~~--~s 280 (372)
.+|||+|||+|.++..++..+ ..|+++|+++ .+++.|+++ ++ + +.+...|...+ + +++ ++
T Consensus 85 ~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 85 PTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 689999999999999999875 4589999999 999888754 22 2 66666666553 3 444 78
Q ss_pred ccEEEeccc
Q 017377 281 FDMVHCAQC 289 (372)
Q Consensus 281 FDlV~~~~~ 289 (372)
||+|++.-.
T Consensus 162 fD~V~~dP~ 170 (258)
T 2r6z_A 162 PDIVYLDPM 170 (258)
T ss_dssp CSEEEECCC
T ss_pred ccEEEECCC
Confidence 999999744
No 277
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.08 E-value=2.1e-06 Score=83.39 Aligned_cols=106 Identities=17% Similarity=0.257 Sum_probs=74.8
Q ss_pred CCeEEEeCCCCcHHHHHHHhc---------------CCceeEEEEeeCCHHHHHHHHHcCC------CeEEEEe---ecc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSL---------------KLMAVCVAVYEATGSQVQLALERGL------PAMIGNF---ISR 272 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~---------------~~~~~~v~gvD~s~~~v~~A~~rgl------~~~~~~~---d~~ 272 (372)
.-+|+|+||++|..+..+.+. ......|...|...+.....-..-. +..+..+ +..
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 457999999999887766554 2456788889988877765544311 2233322 233
Q ss_pred CCCCCCCCccEEEecccccccccc---------------------------------HHHHHHHHHhcccCCeEEEEEeC
Q 017377 273 QLPYPSLSFDMVHCAQCGIIWDKK---------------------------------EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 273 ~lp~~~~sFDlV~~~~~~~~~~~~---------------------------------~~~~L~el~rvLkPGG~lvis~p 319 (372)
.-.||++++|+|+++.+ .||..+ ...+|+...+.|+|||.++++..
T Consensus 132 ~rlfp~~S~d~v~Ss~a-LHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYS-LMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESC-TTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhh-hhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 46789999999999976 778422 12348888999999999999987
Q ss_pred CCCC
Q 017377 320 ESKP 323 (372)
Q Consensus 320 ~~~~ 323 (372)
....
T Consensus 211 gr~~ 214 (359)
T 1m6e_X 211 GRRS 214 (359)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 5544
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.07 E-value=6.1e-06 Score=76.95 Aligned_cols=101 Identities=18% Similarity=0.137 Sum_probs=64.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHH---cCCCeEEEEeeccCCCCCCCCccEEEecccccc--
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALE---RGLPAMIGNFISRQLPYPSLSFDMVHCAQCGII-- 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~---rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~-- 292 (372)
.+|||+|||+|.|+.+++++. ....+.|+|++..+...+.. .+.++....-++....++.+.+|+|+|..+ .+
T Consensus 92 ~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~~~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDmA-pnsG 169 (282)
T 3gcz_A 92 GIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIMRTTLGWNLIRFKDKTDVFNMEVIPGDTLLCDIG-ESSP 169 (282)
T ss_dssp EEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCGGGSCCCCCSEEEECCC-CCCS
T ss_pred CEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccccccCCCceEEeeCCcchhhcCCCCcCEEEecCc-cCCC
Confidence 689999999999999988653 34568899997653222211 022222222122223456789999999744 33
Q ss_pred --ccccHH--HHHHHHHhcccCC--eEEEEEeCC
Q 017377 293 --WDKKEG--IFLIEADRLLKPG--GYFVLTSPE 320 (372)
Q Consensus 293 --~~~~~~--~~L~el~rvLkPG--G~lvis~p~ 320 (372)
+.+... .+|.-+.++|+|| |.|++-...
T Consensus 170 ~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 170 SIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 112222 2466678899999 999998775
No 279
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.05 E-value=4.4e-05 Score=72.05 Aligned_cols=104 Identities=18% Similarity=0.161 Sum_probs=75.3
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----------CCCeEEEEeeccC-CCCCCCCccEE
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----------GLPAMIGNFISRQ-LPYPSLSFDMV 284 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----------gl~~~~~~~d~~~-lp~~~~sFDlV 284 (372)
.+++||=||.|.|..+..+++.. ....++.+|+++..++.+++. ...+.+...|... +.-..++||+|
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 45899999999999999999873 346788999999999998764 1235555555443 23456789999
Q ss_pred Eecccccccccc----HHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 285 HCAQCGIIWDKK----EGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 285 ~~~~~~~~~~~~----~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
+.-.. -..... ...+++.+++.|+|||.++.....+
T Consensus 162 i~D~~-dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp 201 (294)
T 3o4f_A 162 ISDCT-DPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVC 201 (294)
T ss_dssp EESCC-CCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEES
T ss_pred EEeCC-CcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCc
Confidence 97522 221111 1258999999999999999875543
No 280
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.94 E-value=1.2e-05 Score=83.88 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=66.3
Q ss_pred CeEEEeCCCCcHHHHHHHhc----C--------CceeEEEEeeCCHHHHHHHHH---cCC--CeEEEEeeccCCCCC---
Q 017377 218 QSVLDVGCGFGSFGAHLVSL----K--------LMAVCVAVYEATGSQVQLALE---RGL--PAMIGNFISRQLPYP--- 277 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~----~--------~~~~~v~gvD~s~~~v~~A~~---rgl--~~~~~~~d~~~lp~~--- 277 (372)
..|||||||+|.+....+.. + .....|+++|-++..+...+. ++. .+.+...+++++..|
T Consensus 411 ~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~ 490 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKD 490 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhccccccc
Confidence 57999999999996432211 1 124579999999876643332 344 366777788877664
Q ss_pred --CCCccEEEeccccccc-cccHHHHHHHHHhcccCCeEEE
Q 017377 278 --SLSFDMVHCAQCGIIW-DKKEGIFLIEADRLLKPGGYFV 315 (372)
Q Consensus 278 --~~sFDlV~~~~~~~~~-~~~~~~~L~el~rvLkPGG~lv 315 (372)
.+.+|+|++...-... .+-....|..+.|.|||||.++
T Consensus 491 ~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 491 RGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 5789999997432211 1222357888899999999876
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.90 E-value=4.3e-05 Score=80.83 Aligned_cols=103 Identities=17% Similarity=0.068 Sum_probs=69.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCC--ceeEEEEeeCCHHHHHHH--HHc--------CCCe-EEEEeeccCC-CCCCCCccE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKL--MAVCVAVYEATGSQVQLA--LER--------GLPA-MIGNFISRQL-PYPSLSFDM 283 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~--~~~~v~gvD~s~~~v~~A--~~r--------gl~~-~~~~~d~~~l-p~~~~sFDl 283 (372)
.+|||.|||+|.+...+++... ....++|+|+++.+++.| +.. ++.. .+...+.... +...+.||+
T Consensus 323 ~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDV 402 (878)
T 3s1s_A 323 EVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSV 402 (878)
T ss_dssp CEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEE
T ss_pred CEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCCE
Confidence 6899999999999999887632 235689999999999988 322 2222 2332233222 234578999
Q ss_pred EEecccccc-cc--c------------------------c-HHHHHHHHHhcccCCeEEEEEeCC
Q 017377 284 VHCAQCGII-WD--K------------------------K-EGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 284 V~~~~~~~~-~~--~------------------------~-~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
|+++--... +. . + ...++..+.+.|+|||++++..|.
T Consensus 403 VIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 403 VVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred EEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 999833211 10 0 0 123678899999999999999885
No 282
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.89 E-value=0.00011 Score=65.73 Aligned_cols=91 Identities=11% Similarity=-0.044 Sum_probs=62.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC----CeEEEEeeccC---------------C
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL----PAMIGNFISRQ---------------L 274 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl----~~~~~~~d~~~---------------l 274 (372)
++||||||| ..+..++.. . ...|+.+|.++...+.|++. |+ .+.+...++.. +
T Consensus 32 ~~VLEiGtG--ySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 32 EVILEYGSG--GSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp SEEEEESCS--HHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CEEEEECch--HHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 789999985 566677664 2 46789999999999888753 54 24455455322 2
Q ss_pred C--------C-CCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 275 P--------Y-PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 275 p--------~-~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
+ . ..++||+|+.-.- .....+..+.+.|+|||.+++..
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred HHHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEEeC
Confidence 2 1 2378999998742 11245666779999999996653
No 283
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.87 E-value=9.5e-06 Score=80.17 Aligned_cols=67 Identities=16% Similarity=0.028 Sum_probs=53.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc------CC-CeEEEEeeccCC-CC-CCCCccEEEec
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER------GL-PAMIGNFISRQL-PY-PSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r------gl-~~~~~~~d~~~l-p~-~~~sFDlV~~~ 287 (372)
.+|||+|||+|..+..|+..+ ..|+++|+++.+++.|+++ |+ ++.+...|+... +. ++++||+|++.
T Consensus 95 ~~VLDLgcG~G~~al~LA~~g---~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 95 TKVVDLTGGLGIDFIALMSKA---SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp CEEEESSCSSSHHHHHHHTTC---SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CEEEEeCCCchHHHHHHHhcC---CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 789999999999999998774 4699999999999988765 55 356777776653 32 34689999995
No 284
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=97.76 E-value=2.8e-06 Score=71.83 Aligned_cols=61 Identities=8% Similarity=-0.050 Sum_probs=53.0
Q ss_pred HHHHHHHHHHhcccccccceeccCCC-CccccchhhhhHHHhHHHHhhccccCCCCCCCccccCC
Q 017377 27 LSIVALIAVLGSSTSNTLDFVTSSSK-PDIYSSYRRLKEQAAVDYLELRTLSLGTTRPKELDLCG 90 (372)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~~~~~~~~~~g~~~~~~~~~c~ 90 (372)
+.=+|.++|++..|+=|||+.|++.. .|..||||.|++.|+.+|..|..|..-|. ++++-.
T Consensus 5 I~e~A~~~gvs~~tLR~Ye~~GLl~p~~r~~~g~R~Y~~~dl~~l~~I~~lr~~G~---sL~eIk 66 (142)
T 3gp4_A 5 IKEASEKSGVSADTIRYYERIGLIPPIHRNESGVRKFGAEDLRWILFTRQMRRAGL---SIEALI 66 (142)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHTSSCCCCBCTTSCBCBCHHHHHHHHHHHHHHHTTC---CHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHHCCCCCCCcCCCCCCeeeCHHHHHHHHHHHHHHHcCC---CHHHHH
Confidence 34578999999999999999999987 78899999999999999999999987777 454443
No 285
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.76 E-value=0.00034 Score=67.91 Aligned_cols=119 Identities=10% Similarity=-0.030 Sum_probs=70.4
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
..+|||+||++|.|+..+++++ ..|+++|+.+.. .... ....+.+...|......+.+.||+|+|--. .+
T Consensus 212 G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~l~-~~l~-~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~-----~~ 281 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGPMA-QSLM-DTGQVTWLREDGFKFRPTRSNISWMVCDMV-----EK 281 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHTT---CEEEEECSSCCC-HHHH-TTTCEEEECSCTTTCCCCSSCEEEEEECCS-----SC
T ss_pred CCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhhcC-hhhc-cCCCeEEEeCccccccCCCCCcCEEEEcCC-----CC
Confidence 3899999999999999999986 468999986422 2222 223466666677777777788999999633 33
Q ss_pred HHHHHHHHHhcccC---CeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCee
Q 017377 297 EGIFLIEADRLLKP---GGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWS 349 (372)
Q Consensus 297 ~~~~L~el~rvLkP---GG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~ 349 (372)
+...+.-+.+.|.. ++.++..-..... ...+....++.+....+..+..
T Consensus 282 p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~----~~~~l~~~~~~i~~~l~~~g~~ 333 (375)
T 4auk_A 282 PAKVAALMAQWLVNGWCRETIFNLKLPMKK----RYEEVSHNLAYIQAQLDEHGIN 333 (375)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEEEECCSSS----HHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHhHHHHHHHHhccccceEEEEEEecccc----hHHHHHHHHHHHHHHHHhcCcc
Confidence 33344444444444 3544433222211 0112334455555555544443
No 286
>3hh0_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, 11183J, structural genomics; 2.67A {Bacillus cereus atcc 14579}
Probab=97.76 E-value=2.6e-06 Score=72.42 Aligned_cols=55 Identities=7% Similarity=-0.054 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhcccccccceeccCCCC-ccccchhhhhHHHhHHHHhhccccCCCC
Q 017377 27 LSIVALIAVLGSSTSNTLDFVTSSSKP-DIYSSYRRLKEQAAVDYLELRTLSLGTT 81 (372)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~g~~ 81 (372)
+.=||.++|+|..|+=|||+.|++... |..||||.|++.|+.+|..|..+..-|.
T Consensus 7 I~evA~~~Gvs~~tLR~ye~~GLl~p~~r~~~g~R~Y~~~dl~~l~~I~~lr~~G~ 62 (146)
T 3hh0_A 7 ISEFASVGDVTVRALRYYDKINLLKPSDYTEGGHRLYTKDDLYVLQQIQSFKHLGF 62 (146)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTTSSCCSEECTTSCEEBCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCcCHHHHHHHHHCCCCCCCeECCCCCEeeCHHHHHHHHHHHHHHHcCC
Confidence 345789999999999999999999865 7889999999999999999999877777
No 287
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.74 E-value=3e-05 Score=71.98 Aligned_cols=90 Identities=16% Similarity=0.061 Sum_probs=57.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHH-------HHHHHc----C-C--CeEEEEeeccC-CCCCCCCcc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQV-------QLALER----G-L--PAMIGNFISRQ-LPYPSLSFD 282 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v-------~~A~~r----g-l--~~~~~~~d~~~-lp~~~~sFD 282 (372)
.+|||+|||+|..+..++..+. .|+++|.++.+. +.+.++ + + .+.+...|... ++....+||
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~---~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fD 166 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC---RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQ 166 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC---CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCS
T ss_pred CEEEEcCCcCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCC
Confidence 6899999999999999998853 489999999764 333321 1 2 35566666554 342234799
Q ss_pred EEEeccccccccccHHHHHHHHHhcccCCe
Q 017377 283 MVHCAQCGIIWDKKEGIFLIEADRLLKPGG 312 (372)
Q Consensus 283 lV~~~~~~~~~~~~~~~~L~el~rvLkPGG 312 (372)
+|++.-.+ +... ...++++..++|++.+
T Consensus 167 vV~lDP~y-~~~~-~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 167 VVYLDPMF-PHKQ-KSALVKKEMRVFQSLV 194 (258)
T ss_dssp EEEECCCC-CCCC-C-----HHHHHHHHHS
T ss_pred EEEEcCCC-CCcc-cchHHHHHHHHHHHhh
Confidence 99997553 3322 2246667777777755
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.72 E-value=3.3e-05 Score=71.63 Aligned_cols=101 Identities=14% Similarity=0.049 Sum_probs=61.7
Q ss_pred CCCeEEEeCCCCcHHHHHHHhc-------CCc----eeEEEEeeCCH---HHHHHH-----------HHc--C-------
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSL-------KLM----AVCVAVYEATG---SQVQLA-----------LER--G------- 261 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~-------~~~----~~~v~gvD~s~---~~v~~A-----------~~r--g------- 261 (372)
...+|||||+|+|..+..++.. ++. ...++++|..+ .+++.| ++. .
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3468999999999988776543 332 36789999776 444432 221 0
Q ss_pred ----------CCeEEEEeeccC-CCCC-C---CCccEEEecccccccccc--HHHHHHHHHhcccCCeEEEE
Q 017377 262 ----------LPAMIGNFISRQ-LPYP-S---LSFDMVHCAQCGIIWDKK--EGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 262 ----------l~~~~~~~d~~~-lp~~-~---~sFDlV~~~~~~~~~~~~--~~~~L~el~rvLkPGG~lvi 316 (372)
..+.+...|+.+ ++.. + ..||+|+.-...-.-.++ ...+|.++.++|+|||.|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 112344445433 3322 2 279999985211110111 23589999999999999885
No 289
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=97.71 E-value=2.7e-06 Score=72.38 Aligned_cols=63 Identities=14% Similarity=-0.071 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHhcccccccceeccCC-CCccccchhhhhHHHhHHHHhhccccCCCCCCCccccCC
Q 017377 25 CFLSIVALIAVLGSSTSNTLDFVTSSS-KPDIYSSYRRLKEQAAVDYLELRTLSLGTTRPKELDLCG 90 (372)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~g~~~~~~~~~c~ 90 (372)
+.+.=||.++|++..|+=|||+.|++. ..|..||||.|++.|+.+|..|..|..-|. ++++..
T Consensus 17 ~~I~evA~~~gvs~~tLR~Ye~~Gll~p~~r~~~g~R~Y~~~dl~~l~~I~~lr~~G~---sL~eIk 80 (148)
T 3gpv_A 17 YTIGQVAKMQHLTISQIRYYDKQGLFPFLQRNEKGDRIFNEEALKYLEMILCLKNTGM---PIQKIK 80 (148)
T ss_dssp BCHHHHHHHTTCCHHHHHHHHHTTCCTTCEECTTCCEEBCHHHHHHHHHHHHHHTTTC---CHHHHH
T ss_pred eeHHHHHHHHCcCHHHHHHHHHCCCCCCCcCCCCCCeecCHHHHHHHHHHHHHHHcCC---CHHHHH
Confidence 456678999999999999999999996 677889999999999999999999988777 555544
No 290
>2vz4_A Tipal, HTH-type transcriptional activator TIPA; transcription, resistance, antibiotic; 2.90A {Streptomyces lividans}
Probab=97.68 E-value=3.7e-06 Score=67.62 Aligned_cols=54 Identities=13% Similarity=-0.055 Sum_probs=48.6
Q ss_pred HHHHHHHHHhcccccccceeccCCCCc-cccchhhhhHHHhHHHHhhccccCCCC
Q 017377 28 SIVALIAVLGSSTSNTLDFVTSSSKPD-IYSSYRRLKEQAAVDYLELRTLSLGTT 81 (372)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~g~~ 81 (372)
.=+|.++|++..|+-||++.|++...+ ..||||.|++.|+.++..|..+..-|.
T Consensus 5 ~e~A~~~gvs~~tLR~ye~~Gll~p~~r~~~g~R~Y~~~dl~~l~~I~~lr~~G~ 59 (108)
T 2vz4_A 5 GQVAGFAGVTVRTLHHYDDIGLLVPSERSHAGHRRYSDADLDRLQQILFYRELGF 59 (108)
T ss_dssp HHHHHHHTCCHHHHHHHHHHTSSCCSEECSSCCEEBCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCcCHHHHHHHHHCCCCCCCccCCCCCeecCHHHHHHHHHHHHHHHCCC
Confidence 347889999999999999999998765 789999999999999999999877777
No 291
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.67 E-value=0.00021 Score=69.38 Aligned_cols=117 Identities=17% Similarity=0.095 Sum_probs=81.2
Q ss_pred HHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----CC-------CeEEEE
Q 017377 200 IAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----GL-------PAMIGN 268 (372)
Q Consensus 200 l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----gl-------~~~~~~ 268 (372)
....+...++ .+|||+.+|.|.=+..|++.+. ...|++.|+++.-++..+++ ++ ++.+..
T Consensus 140 ~~~~L~~~pg--------~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~ 210 (359)
T 4fzv_A 140 PVLALGLQPG--------DIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTS 210 (359)
T ss_dssp HHHHHCCCTT--------EEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEEC
T ss_pred HHHHhCCCCC--------CEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEe
Confidence 4445566666 7999999999999999988753 35689999999887655542 22 455666
Q ss_pred eeccCCC-CCCCCccEEEe----cc---ccc--------ccccc--------HHHHHHHHHhcccCCeEEEEEeCCCCCC
Q 017377 269 FISRQLP-YPSLSFDMVHC----AQ---CGI--------IWDKK--------EGIFLIEADRLLKPGGYFVLTSPESKPR 324 (372)
Q Consensus 269 ~d~~~lp-~~~~sFDlV~~----~~---~~~--------~~~~~--------~~~~L~el~rvLkPGG~lvis~p~~~~~ 324 (372)
.|...++ ...+.||.|++ +. ... .+... ...+|....+.|||||+++.++......
T Consensus 211 ~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ 290 (359)
T 4fzv_A 211 WDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHL 290 (359)
T ss_dssp CCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTT
T ss_pred CchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchh
Confidence 6665543 34678999996 32 111 11111 1257888999999999999999877664
Q ss_pred C
Q 017377 325 G 325 (372)
Q Consensus 325 ~ 325 (372)
+
T Consensus 291 E 291 (359)
T 4fzv_A 291 Q 291 (359)
T ss_dssp T
T ss_pred h
Confidence 3
No 292
>1q06_A Transcriptional regulator CUER; MERR family transcriptional regulator, copper efflux regulator; 2.07A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q05_A 1q07_A
Probab=97.64 E-value=4.8e-06 Score=69.72 Aligned_cols=54 Identities=22% Similarity=0.087 Sum_probs=48.8
Q ss_pred HHHHHHHHHhcccccccceeccCCCC-ccccchhhhhHHHhHHHHhhccccCCCC
Q 017377 28 SIVALIAVLGSSTSNTLDFVTSSSKP-DIYSSYRRLKEQAAVDYLELRTLSLGTT 81 (372)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~~~~~~~~~~~~~~~~~~~g~~ 81 (372)
.=+|.++|++..|+=|||+.|++... |..||||.|++.|+.++..|..+..-|.
T Consensus 4 ~e~A~~~gvs~~tLR~ye~~Gll~p~~r~~~g~R~Y~~~dl~~l~~I~~lr~~G~ 58 (135)
T 1q06_A 4 SDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGF 58 (135)
T ss_dssp HHHHHHHTCCHHHHHHHHHTTCSCCCEECTTSCEECCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCcCHHHHHHHHHCCCCCCCccCCCCCeeeCHHHHHHHHHHHHHHHCCC
Confidence 34788999999999999999999875 7889999999999999999998877777
No 293
>2zhg_A Redox-sensitive transcriptional activator SOXR; oxidative stress, MERR family, activator; HET: DNA; 2.80A {Escherichia coli} PDB: 2zhh_A
Probab=97.62 E-value=3.4e-06 Score=72.32 Aligned_cols=56 Identities=11% Similarity=-0.124 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhcccccccceeccCCCCccccchhhhhHHHhHHHHhhccccCCCC
Q 017377 26 FLSIVALIAVLGSSTSNTLDFVTSSSKPDIYSSYRRLKEQAAVDYLELRTLSLGTT 81 (372)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~g~~ 81 (372)
.+.=+|.++|++..|+=|||+.|++...|..||||.|++.|+.+|..|..+..-|.
T Consensus 13 ~i~e~A~~~gvs~~TLR~ye~~Gll~p~r~~~g~R~Y~~~dl~~l~~I~~lr~~G~ 68 (154)
T 2zhg_A 13 TPGEVAKRSGVAVSALHFYESKGLITSIRNSGNQRRYKRDVLRYVAIIKIAQRIGI 68 (154)
T ss_dssp CHHHHHHHHTSCHHHHHHHHHTTSSCCEECTTSCEEBCTTHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHCcCHHHHHHHHHcCCCCcccCCCCCEEeCHHHHHHHHHHHHHHHCCC
Confidence 34568899999999999999999999888899999999999999999998877677
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.61 E-value=0.00022 Score=66.94 Aligned_cols=101 Identities=18% Similarity=0.174 Sum_probs=63.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHH---HcCCCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLAL---ERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~---~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.+|||+||++|.|+..++++. ....+.|+|+...+..... ..+.+.....-++....++.+.+|+|+|..+ .+-.
T Consensus 83 ~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~A-PnsG 160 (300)
T 3eld_A 83 GRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIG-ESSS 160 (300)
T ss_dssp EEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-CCCS
T ss_pred CEEEEcCCCCCHHHHHHHHhc-CCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEeecCc-CCCC
Confidence 799999999999999999863 3456889998754211100 0011222222122223455688999999643 3311
Q ss_pred ----ccH--HHHHHHHHhcccCC-eEEEEEeCC
Q 017377 295 ----KKE--GIFLIEADRLLKPG-GYFVLTSPE 320 (372)
Q Consensus 295 ----~~~--~~~L~el~rvLkPG-G~lvis~p~ 320 (372)
+.. ..+|.-+.++|+|| |.|++-...
T Consensus 161 ~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 161 NPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 111 13466668899999 999998764
No 295
>2jml_A DNA binding domain/transcriptional regulator; anti-repressor, MERR, carotenogenesis; HET: DNA; NMR {Myxococcus xanthus}
Probab=97.59 E-value=3.8e-06 Score=63.91 Aligned_cols=55 Identities=9% Similarity=0.012 Sum_probs=48.4
Q ss_pred HHHHHHHHHHhccccccccee-ccCCCCccc-cchhhhhHHHhHHHHhhcccc-CCCC
Q 017377 27 LSIVALIAVLGSSTSNTLDFV-TSSSKPDIY-SSYRRLKEQAAVDYLELRTLS-LGTT 81 (372)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~y~~~~~~~~~~~~~~~~~~-~g~~ 81 (372)
+.=+|.++|++..|+=|||+. |++...|.. ||||+|++.|+.+|..|..|. .-|.
T Consensus 8 i~e~A~~~gvs~~tlR~ye~~~gl~~p~r~~~~g~R~Y~~~dl~~l~~I~~l~~~~G~ 65 (81)
T 2jml_A 8 IRTIARMTGIREATLRAWERRYGFPRPLRSEGNNYRVYSREEVEAVRRVARLIQEEGL 65 (81)
T ss_dssp HHHHHHTTSTTHHHHHHHHHHTCCSCCBSSSCSSSCEECHHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHCcCHHHHHHHHHhCCCCCCcCCCCCCeeecCHHHHHHHHHHHHHHHHCCC
Confidence 345788999999999999985 999888888 999999999999999999987 5556
No 296
>1r8d_A Transcription activator MTAN; protein-DNA complex, transcription/DNA complex; 2.70A {Bacillus subtilis} SCOP: a.6.1.3 PDB: 1jbg_A
Probab=97.58 E-value=6.2e-06 Score=66.38 Aligned_cols=54 Identities=13% Similarity=0.019 Sum_probs=48.5
Q ss_pred HHHHHHHHHhcccccccceeccCCCCc-cccchhhhhHHHhHHHHhhccccCCCC
Q 017377 28 SIVALIAVLGSSTSNTLDFVTSSSKPD-IYSSYRRLKEQAAVDYLELRTLSLGTT 81 (372)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~g~~ 81 (372)
.=+|.++|+|..|+=||++.|++...+ ..||||.|++.|+.++..|..+..-|.
T Consensus 6 ~e~A~~~gvs~~tLR~ye~~Gll~p~~~~~~g~R~Y~~~dl~~l~~I~~l~~~G~ 60 (109)
T 1r8d_A 6 KQVAEISGVSIRTLHHYDNIELLNPSALTDAGYRLYSDADLERLQQILFFKEIGF 60 (109)
T ss_dssp HHHHHHHSCCHHHHHHHHHTTSSCCSEECTTCCEEBCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCcCHHHHHHHHHCCCCCCCeECCCCCeeeCHHHHHHHHHHHHHHHCCC
Confidence 447889999999999999999998766 689999999999999999998877666
No 297
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.51 E-value=0.001 Score=62.33 Aligned_cols=134 Identities=13% Similarity=0.078 Sum_probs=83.2
Q ss_pred CCeEEEeCCCCcHHHHHHHhc----CCceeEEEEeeCCHH--------------------------HHHHHHH----cCC
Q 017377 217 VQSVLDVGCGFGSFGAHLVSL----KLMAVCVAVYEATGS--------------------------QVQLALE----RGL 262 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~----~~~~~~v~gvD~s~~--------------------------~v~~A~~----rgl 262 (372)
+..|||+|+..|..+..++.. +.....|+++|..+. .++.+++ .|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 368999999999988887643 112355777885311 1233333 354
Q ss_pred ---CeEEEEeecc-CCC-CCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHH
Q 017377 263 ---PAMIGNFISR-QLP-YPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLK 337 (372)
Q Consensus 263 ---~~~~~~~d~~-~lp-~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~ 337 (372)
.+.+..+++. .+| +++++||+|+.-.. ........|..+.+.|+|||++++.+... + ...-.
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~DD~~~-~---------~G~~~ 253 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIVDDYMM-C---------PPCKD 253 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEESSCTT-C---------HHHHH
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEEcCCCC-C---------HHHHH
Confidence 2556555442 233 44678999998632 21333468999999999999999887621 1 12234
Q ss_pred HHHHHHHhcCeeEEee--ecceEEEEec
Q 017377 338 VMEEFTEKICWSLIAQ--QDETFIWQKT 363 (372)
Q Consensus 338 ~i~~l~~~lcw~~~~~--~~~~~iw~K~ 363 (372)
.+.+|.+..+++.... ....+.|+|+
T Consensus 254 Av~Ef~~~~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 254 AVDEYRAKFDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp HHHHHHHHTTCCSCCEECSSSCEEEECC
T ss_pred HHHHHHHhcCCceEEEEecCEEEEEEeC
Confidence 5566666666554443 3456788885
No 298
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.46 E-value=0.00011 Score=62.06 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=54.1
Q ss_pred CeEEEeCCCCc-HHHHHHHh-cCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCC--CCccEEEeccccccc
Q 017377 218 QSVLDVGCGFG-SFGAHLVS-LKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPS--LSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G-~~~~~L~~-~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~--~sFDlV~~~~~~~~~ 293 (372)
.+|||||||.| ..+..|++ .+ ..|+++|+++..++ +...|..+ |..+ +.||+|.+.+.
T Consensus 37 ~rVlEVG~G~g~~vA~~La~~~g---~~V~atDInp~Av~----------~v~dDiF~-P~~~~Y~~~DLIYsirP---- 98 (153)
T 2k4m_A 37 TRVVEVGAGRFLYVSDYIRKHSK---VDLVLTDIKPSHGG----------IVRDDITS-PRMEIYRGAALIYSIRP---- 98 (153)
T ss_dssp SEEEEETCTTCCHHHHHHHHHSC---CEEEEECSSCSSTT----------EECCCSSS-CCHHHHTTEEEEEEESC----
T ss_pred CcEEEEccCCChHHHHHHHHhCC---CeEEEEECCccccc----------eEEccCCC-CcccccCCcCEEEEcCC----
Confidence 68999999999 59999997 55 45899999987665 33334433 3322 47999988654
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
+.+....+.++.+-. |.-++|...
T Consensus 99 P~El~~~i~~lA~~v--~adliI~pL 122 (153)
T 2k4m_A 99 PAEIHSSLMRVADAV--GARLIIKPL 122 (153)
T ss_dssp CTTTHHHHHHHHHHH--TCEEEEECB
T ss_pred CHHHHHHHHHHHHHc--CCCEEEEcC
Confidence 333344555555543 455666544
No 299
>2dg6_A Putative transcriptional regulator; winged-helix motif, MERR family, gene regulation; 2.20A {Streptomyces coelicolor}
Probab=97.41 E-value=1.6e-05 Score=72.20 Aligned_cols=60 Identities=7% Similarity=-0.081 Sum_probs=43.6
Q ss_pred HHHHHHHHHhcccccccceeccCCC-CccccchhhhhHHHhHHHHhhccccCC-CCCCCccccCC
Q 017377 28 SIVALIAVLGSSTSNTLDFVTSSSK-PDIYSSYRRLKEQAAVDYLELRTLSLG-TTRPKELDLCG 90 (372)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~c~ 90 (372)
.=+|.++|++..|+=|||+.|++.. .|..||||.|++.++.+|..|..++.- |. ++++-.
T Consensus 4 gevA~~~Gvs~~TLRyYE~~GLl~p~~R~~~gyR~Y~~~dl~~L~~I~~lr~~~G~---sL~eIk 65 (222)
T 2dg6_A 4 ADLSKRSGVSTATIKYYLREGLLPPGRQVNATTAEYDEDHLRRLRLVRALIQVGKV---PVATAR 65 (222)
T ss_dssp HHHHHHHTCCHHHHHHHHHHTSSCCC---------CCHHHHHHHHHHHHHHHTTCC---CHHHHH
T ss_pred HHHHHHHCcCHHHHHHHHHCCCCCCCeeCCCCceeeCHHHHHHHHHHHHHHHcCCC---CHHHHH
Confidence 3478899999999999999999986 678899999999999999999999875 77 455444
No 300
>3qao_A LMO0526 protein, MERR-like transcriptional regulator; structural genomics, the center for structural genomics of I diseases, csgid; 1.87A {Listeria monocytogenes}
Probab=97.34 E-value=1.7e-05 Score=73.21 Aligned_cols=55 Identities=11% Similarity=0.047 Sum_probs=49.8
Q ss_pred HHHHHHHHHHhcccccccceeccCCCCc-cccchhhhhHHHhHHHHhhccccCCCC
Q 017377 27 LSIVALIAVLGSSTSNTLDFVTSSSKPD-IYSSYRRLKEQAAVDYLELRTLSLGTT 81 (372)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~~~~g~~ 81 (372)
+.=||.++|+|..|+=|||++|++...| ..||||.|++.|+.+|..|..|..-|.
T Consensus 6 I~evA~~~gvs~~TLRyYe~~GLL~p~~~~~~GyR~Y~~~dl~~L~~I~~lr~~G~ 61 (249)
T 3qao_A 6 IKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDVDKLQQILFFKELDF 61 (249)
T ss_dssp HHHHHHHHCCCHHHHHHHHHTTSSCCEECTTTCCEEBCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCcCHHHHHHHHHCCCCCCceECCCCCeeeCHHHHHHHHHHHHHHHCCC
Confidence 3457899999999999999999998877 789999999999999999999887777
No 301
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.33 E-value=0.00059 Score=66.44 Aligned_cols=102 Identities=17% Similarity=0.071 Sum_probs=69.4
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCC-------------eEEEEeeccCC----CCCC
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLP-------------AMIGNFISRQL----PYPS 278 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~-------------~~~~~~d~~~l----p~~~ 278 (372)
.+++||=||.|.|..+..+++... ..++.+|+++..++.|++.-.. +.+...|+... +-..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~--~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcHHHHHHHHhcCC--ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 357999999999999999998753 5688999999999999875211 23333333211 1124
Q ss_pred CCccEEEeccccccccc-----c----HHHHHHHHHhcccCCeEEEEEeC
Q 017377 279 LSFDMVHCAQCGIIWDK-----K----EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 279 ~sFDlV~~~~~~~~~~~-----~----~~~~L~el~rvLkPGG~lvis~p 319 (372)
+.||+|+.-..-..... . ...+++.++++|+|||.++....
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~ 332 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 332 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence 67999997521111001 1 13578889999999999998643
No 302
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=97.08 E-value=4.5e-05 Score=70.96 Aligned_cols=62 Identities=16% Similarity=0.109 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhcccccccceeccCCCCc--cccchhhhhHHHhHHHHhhccccCCCCCCCccccCCC
Q 017377 27 LSIVALIAVLGSSTSNTLDFVTSSSKPD--IYSSYRRLKEQAAVDYLELRTLSLGTTRPKELDLCGK 91 (372)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~y~~~~~~~~~~~~~~~~~~~g~~~~~~~~~c~~ 91 (372)
+.=+|.++|+|..|+-|||+.|++...+ -.||||.|++.++.+|..|..|..-|. ++++-..
T Consensus 8 i~e~a~~~gvs~~tlr~y~~~gll~p~~~d~~~g~R~y~~~~~~~l~~i~~l~~~g~---~l~~i~~ 71 (278)
T 1r8e_A 8 IGEVSKLANVSIKALRYYDKIDLFKPAYVDPDTSYRYYTDSQLIHLDLIKSLKYIGT---PLEEMKK 71 (278)
T ss_dssp HHHHHHHHTCCHHHHHHHHHTTSSCCSEECTTTCCEEEETGGGGHHHHHHHHHHTTC---CHHHHHH
T ss_pred HHHHHHHHCcCHHHHHHHHHCCCCCCCccCCCCCccccCHHHHHHHHHHHHHHHCCC---CHHHHHH
Confidence 3457899999999999999999998766 479999999999999999999987777 5555443
No 303
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.03 E-value=0.0019 Score=60.32 Aligned_cols=82 Identities=10% Similarity=-0.030 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCC--CeEEEEeec
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGL--PAMIGNFIS 271 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl--~~~~~~~d~ 271 (372)
.-+.+.+.+.+...++ ..++|.+||.|..+..++++ ...++|+|.++.+++.|++ -- .+.+...+.
T Consensus 8 pVLl~e~le~L~~~~g--------g~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~~rv~lv~~~f 75 (285)
T 1wg8_A 8 PVLYQEALDLLAVRPG--------GVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHLPGLTVVQGNF 75 (285)
T ss_dssp CTTHHHHHHHHTCCTT--------CEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCCTTEEEEESCG
T ss_pred hHHHHHHHHhhCCCCC--------CEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hccCCEEEEECCc
Confidence 3456677777777665 78999999999999999997 3579999999999999987 21 355555554
Q ss_pred cCCC-----CCCCCccEEEec
Q 017377 272 RQLP-----YPSLSFDMVHCA 287 (372)
Q Consensus 272 ~~lp-----~~~~sFDlV~~~ 287 (372)
..++ ...++||.|++.
T Consensus 76 ~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 76 RHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp GGHHHHHHHTTCSCEEEEEEE
T ss_pred chHHHHHHHcCCCCcCEEEeC
Confidence 4442 122578888874
No 304
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.01 E-value=0.0043 Score=63.19 Aligned_cols=126 Identities=22% Similarity=0.189 Sum_probs=80.7
Q ss_pred CcccccchhHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhc----CC--------ceeEEEEeeCCHHH
Q 017377 186 DGLVFDGVKDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSL----KL--------MAVCVAVYEATGSQ 253 (372)
Q Consensus 186 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~----~~--------~~~~v~gvD~s~~~ 253 (372)
++.+|.- ...++.|.+.+....+ .+|+|-.||+|.|...+.+. .. ....+.|.|+++.+
T Consensus 196 ~GqfyTP-~~Vv~lmv~l~~p~~~--------~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~ 266 (530)
T 3ufb_A 196 SGEFYTP-RPVVRFMVEVMDPQLG--------ESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLP 266 (530)
T ss_dssp CCCCCCC-HHHHHHHHHHHCCCTT--------CCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHH
T ss_pred CceECCc-HHHHHHHHHhhccCCC--------CEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHH
Confidence 3445532 3456777777765554 68999999999998766542 11 12458999999999
Q ss_pred HHHHHHc----CCC-eEEEEeeccCCCC----CCCCccEEEeccccc-cc-------------cccH-HHHHHHHHhccc
Q 017377 254 VQLALER----GLP-AMIGNFISRQLPY----PSLSFDMVHCAQCGI-IW-------------DKKE-GIFLIEADRLLK 309 (372)
Q Consensus 254 v~~A~~r----gl~-~~~~~~d~~~lp~----~~~sFDlV~~~~~~~-~~-------------~~~~-~~~L~el~rvLk 309 (372)
...|+.+ |+. ..+...|+-..|+ +...||+|+++--+- .+ ..+. ..++..+.+.||
T Consensus 267 ~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 346 (530)
T 3ufb_A 267 YLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLK 346 (530)
T ss_dssp HHHHHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhh
Confidence 9888754 554 3344445444332 235799999982211 00 0111 235667777776
Q ss_pred -------CCeEEEEEeCC
Q 017377 310 -------PGGYFVLTSPE 320 (372)
Q Consensus 310 -------PGG~lvis~p~ 320 (372)
|||++.+..|.
T Consensus 347 ~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 347 RPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp CTTSSSSSCCEEEEEEEH
T ss_pred hhhhccCCCceEEEEecc
Confidence 79999999884
No 305
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.95 E-value=0.007 Score=56.65 Aligned_cols=101 Identities=19% Similarity=0.151 Sum_probs=63.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHH---HHHcCCC-eEEEEe-eccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQL---ALERGLP-AMIGNF-ISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~---A~~rgl~-~~~~~~-d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+|||+||++|.|+.+.+.+. .+..|.|+|+...--+. .++.+.+ +.+... |...++ ...+|+|+|--. ..
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~--~~~~D~ivcDig-eS 171 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRP--SECCDTLLCDIG-ES 171 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSC--CCCCSEEEECCC-CC
T ss_pred CEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCC--CCCCCEEEEECc-cC
Confidence 699999999999999888774 33579999997651100 0011111 333332 444444 366999999643 22
Q ss_pred ccccH----H---HHHHHHHhcccCC-eEEEEEeCCCCC
Q 017377 293 WDKKE----G---IFLIEADRLLKPG-GYFVLTSPESKP 323 (372)
Q Consensus 293 ~~~~~----~---~~L~el~rvLkPG-G~lvis~p~~~~ 323 (372)
- .++ . .+|.-+.+.|++| |-|++-...+..
T Consensus 172 s-~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY~ 209 (321)
T 3lkz_A 172 S-SSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPYM 209 (321)
T ss_dssp C-SCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTS
T ss_pred C-CChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCCC
Confidence 2 221 1 2566667889999 899987765533
No 306
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.91 E-value=0.0019 Score=60.70 Aligned_cols=54 Identities=22% Similarity=0.131 Sum_probs=43.2
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER 260 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r 260 (372)
.+.+.+.+... .++ ..|||++||+|+++..++..+ ..++|+|+++.+++.|+++
T Consensus 223 ~l~~~~i~~~~-~~~--------~~vlD~f~GsGt~~~~a~~~g---~~~~g~e~~~~~~~~a~~r 276 (297)
T 2zig_A 223 ELAERLVRMFS-FVG--------DVVLDPFAGTGTTLIAAARWG---RRALGVELVPRYAQLAKER 276 (297)
T ss_dssp HHHHHHHHHHC-CTT--------CEEEETTCTTTHHHHHHHHTT---CEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCC--------CEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHH
Confidence 45556665554 333 689999999999999988876 4589999999999998876
No 307
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.79 E-value=0.0024 Score=58.76 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=56.1
Q ss_pred CeEEEeCCCCcHHHHHHHhc-CCc--eeEEEEeeC--CHHHHHHHHHcCCCeE-EEEe-eccCCCCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSL-KLM--AVCVAVYEA--TGSQVQLALERGLPAM-IGNF-ISRQLPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~-~~~--~~~v~gvD~--s~~~v~~A~~rgl~~~-~~~~-d~~~lp~~~~sFDlV~~~~~~ 290 (372)
.+|||+||+.|.++.++++. ++. ...+.++|. .+... ...|+++. +... |...+ +...+|+|+|--.-
T Consensus 75 ~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~---~~~Gv~~i~~~~G~Df~~~--~~~~~DvVLSDMAP 149 (269)
T 2px2_A 75 GKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM---QSYGWNIVTMKSGVDVFYK--PSEISDTLLCDIGE 149 (269)
T ss_dssp EEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC---CSTTGGGEEEECSCCGGGS--CCCCCSEEEECCCC
T ss_pred CEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc---cCCCceEEEeeccCCccCC--CCCCCCEEEeCCCC
Confidence 79999999999999999886 121 123444552 11000 00122322 2223 54443 35689999995321
Q ss_pred c--ccc-ccHH--HHHHHHHhcccCCe-EEEEEeCC
Q 017377 291 I--IWD-KKEG--IFLIEADRLLKPGG-YFVLTSPE 320 (372)
Q Consensus 291 ~--~~~-~~~~--~~L~el~rvLkPGG-~lvis~p~ 320 (372)
- +.. +... .+|.-+.++|+||| .|++-...
T Consensus 150 nSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 150 SSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 1 111 1111 24655678999999 99988775
No 308
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.75 E-value=0.00036 Score=82.98 Aligned_cols=101 Identities=17% Similarity=0.210 Sum_probs=50.1
Q ss_pred CeEEEeCCCCcHHHHHHHhc-C---CceeEEEEeeCCHHHHHHHHHc--CCCeEEEEeeccC-CCCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSL-K---LMAVCVAVYEATGSQVQLALER--GLPAMIGNFISRQ-LPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~-~---~~~~~v~gvD~s~~~v~~A~~r--gl~~~~~~~d~~~-lp~~~~sFDlV~~~~~~ 290 (372)
.+|||||.|+|..+..+.+. + ....+++..|+|+...+.|+++ .+++....++... .++..++||+|+++.++
T Consensus 1242 ~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~~~~~d~~~~~~~~~~~ydlvia~~vl 1321 (2512)
T 2vz8_A 1242 MKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVTQGQWDPANPAPGSLGKADLLVCNCAL 1321 (2512)
T ss_dssp EEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEEEECCCSSCCCC-----CCEEEEECC-
T ss_pred ceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccccccccccccccCCCCceeEEEEcccc
Confidence 58999999999876665543 1 1134677789998777666554 1223332223322 24556789999998774
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
|-..+....|.+++++|||||++++...
T Consensus 1322 -~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1322 -ATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp --------------------CCEEEEEEC
T ss_pred -cccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 5556777799999999999999998764
No 309
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.71 E-value=0.0073 Score=54.85 Aligned_cols=99 Identities=20% Similarity=0.196 Sum_probs=63.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHH---HHHcCCC-eEEEEe-eccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQL---ALERGLP-AMIGNF-ISRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~---A~~rgl~-~~~~~~-d~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+|||+||++|.|+.+.+.+. .+..|.++|+...--+. .+..|.+ +.+... |...++ ...+|.|+|--. .
T Consensus 80 ~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDIg-e- 154 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDIG-E- 154 (267)
T ss_dssp EEEEEESCTTSHHHHHHHTST-TEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECCC-C-
T ss_pred CEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecC--CccccEEEEecC-C-
Confidence 699999999999999888774 33579999997643210 1112333 445544 544443 367999999643 2
Q ss_pred ccccH----H---HHHHHHHhcccCCeEEEEEeCCCC
Q 017377 293 WDKKE----G---IFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 293 ~~~~~----~---~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
-..++ . .+|.-+.+.|++ |-|++-...+.
T Consensus 155 Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 155 SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 22221 1 356666788998 78888766543
No 310
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.32 E-value=0.043 Score=50.29 Aligned_cols=54 Identities=19% Similarity=0.067 Sum_probs=42.5
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER 260 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r 260 (372)
...+.+.+... .++ ..|||..||+|+++....+.+ ..++|+|+++..++.|++|
T Consensus 200 ~l~~~~i~~~~-~~~--------~~vlD~f~GsGtt~~~a~~~g---r~~ig~e~~~~~~~~~~~r 253 (260)
T 1g60_A 200 DLIERIIRASS-NPN--------DLVLDCFMGSGTTAIVAKKLG---RNFIGCDMNAEYVNQANFV 253 (260)
T ss_dssp HHHHHHHHHHC-CTT--------CEEEESSCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHhC-CCC--------CEEEECCCCCCHHHHHHHHcC---CeEEEEeCCHHHHHHHHHH
Confidence 45555555543 333 689999999999999988876 4588999999999998876
No 311
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=95.08 E-value=0.11 Score=49.73 Aligned_cols=70 Identities=19% Similarity=0.151 Sum_probs=52.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC---CCCCCccEEEec
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP---YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp---~~~~sFDlV~~~ 287 (372)
.+|+|+-||.|.++..+...|.....+.++|+++.+++..+.+.....+...|...+. ++...+|+|+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 5799999999999999988875445688999999999998887555444455665553 111268999986
No 312
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.69 E-value=0.052 Score=50.83 Aligned_cols=96 Identities=9% Similarity=-0.027 Sum_probs=57.7
Q ss_pred CCeEEEeCC------CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccc-
Q 017377 217 VQSVLDVGC------GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQC- 289 (372)
Q Consensus 217 ~~~VLDIGC------G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~- 289 (372)
..+|||+|+ .+|++ .+...+.....++++|+.+-. ...+ .+...|..... ..+.||+|++--.
T Consensus 110 gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~------sda~-~~IqGD~~~~~-~~~k~DLVISDMAP 179 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV------SDAD-STLIGDCATVH-TANKWDLIISDMYD 179 (344)
T ss_dssp TCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB------CSSS-EEEESCGGGEE-ESSCEEEEEECCCC
T ss_pred CCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc------cCCC-eEEEccccccc-cCCCCCEEEecCCC
Confidence 479999996 77884 333334333468889986532 1122 33555544332 2478999998411
Q ss_pred ---ccccccc------HHHHHHHHHhcccCCeEEEEEeCCCC
Q 017377 290 ---GIIWDKK------EGIFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 290 ---~~~~~~~------~~~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
-+.-.+. -+.++.=+.++|+|||.|++-.....
T Consensus 180 NtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGs 221 (344)
T 3r24_A 180 PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS 221 (344)
T ss_dssp TTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS
T ss_pred CcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCC
Confidence 0100011 23466667889999999999877443
No 313
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.54 E-value=0.054 Score=50.61 Aligned_cols=96 Identities=20% Similarity=0.216 Sum_probs=52.6
Q ss_pred EEEEeeccC-CC-CCCCCccEEEecccccc-------------------ccccHHHHHHHHHhcccCCeEEEEEeCCCCC
Q 017377 265 MIGNFISRQ-LP-YPSLSFDMVHCAQCGII-------------------WDKKEGIFLIEADRLLKPGGYFVLTSPESKP 323 (372)
Q Consensus 265 ~~~~~d~~~-lp-~~~~sFDlV~~~~~~~~-------------------~~~~~~~~L~el~rvLkPGG~lvis~p~~~~ 323 (372)
.+.+.|... ++ +++++||+|+++--... +......++.++.|+|+|||.+++.......
T Consensus 23 ~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~~~ 102 (297)
T 2zig_A 23 RLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDVAV 102 (297)
T ss_dssp EEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCEEE
T ss_pred EEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCCcc
Confidence 344455443 22 46789999999722111 0011234678999999999999988653210
Q ss_pred -CCCCCcchhhHHHHHHHHHHHhcCeeEEeeecceEEEEecC
Q 017377 324 -RGSSSSRKNKSLLKVMEEFTEKICWSLIAQQDETFIWQKTV 364 (372)
Q Consensus 324 -~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~~~~~iw~K~~ 364 (372)
....-..........+..+.+..+|... +.+||.|+.
T Consensus 103 ~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~----~~iiW~K~~ 140 (297)
T 2zig_A 103 ARRRFGRHLVFPLHADIQVRCRKLGFDNL----NPIIWHKHT 140 (297)
T ss_dssp ECC----EEEECHHHHHHHHHHHTTCEEE----EEEEEECC-
T ss_pred ccccCCcccccccHHHHHHHHHHcCCeee----ccEEEeCCC
Confidence 0000000001123445556677788765 356899874
No 314
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.46 E-value=0.05 Score=52.27 Aligned_cols=93 Identities=13% Similarity=0.085 Sum_probs=64.3
Q ss_pred CeEEEeCCCC-cHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC-----CCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL-----PYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l-----p~~~~sFDlV~~~~~~ 290 (372)
.+||-+|+|. |.++..+++. +. ..|+++|.++...+.+++.|....+. ....++ ...++.||+|+-.-.
T Consensus 192 ~~VlV~GaG~vG~~a~qlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~-~~~~~~~~~~~~~~~gg~D~vid~~g- 267 (371)
T 1f8f_A 192 SSFVTWGAGAVGLSALLAAKVCGA--SIIIAVDIVESRLELAKQLGATHVIN-SKTQDPVAAIKEITDGGVNFALESTG- 267 (371)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTC--SEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTSCEEEEEECSC-
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CeEEEECCCHHHHHHHHHcCCCEEec-CCccCHHHHHHHhcCCCCcEEEECCC-
Confidence 7899999986 7788888775 32 25788999999999999888764432 111110 011236999986532
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. ...+.+..+.|+|||.+++....
T Consensus 268 -----~-~~~~~~~~~~l~~~G~iv~~G~~ 291 (371)
T 1f8f_A 268 -----S-PEILKQGVDALGILGKIAVVGAP 291 (371)
T ss_dssp -----C-HHHHHHHHHTEEEEEEEEECCCC
T ss_pred -----C-HHHHHHHHHHHhcCCEEEEeCCC
Confidence 1 13678889999999999987643
No 315
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.40 E-value=0.17 Score=48.98 Aligned_cols=99 Identities=16% Similarity=0.101 Sum_probs=65.1
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC-C------CCCCCccEEEecc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQL-P------YPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l-p------~~~~sFDlV~~~~ 288 (372)
.+||-+|+|. |.++..+++. ... .|+++|.++..++.+++.|.. ..+....+. . .....||+|+-.-
T Consensus 187 ~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~ 262 (398)
T 2dph_A 187 SHVYIAGAGPVGRCAAAGARL--LGAACVIVGDQNPERLKLLSDAGFE--TIDLRNSAPLRDQIDQILGKPEVDCGVDAV 262 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCSEEEEEESCHHHHHHHHTTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCHHHHHHHHHcCCc--EEcCCCcchHHHHHHHHhCCCCCCEEEECC
Confidence 7899999986 8888888875 223 688899999999999887763 332211111 0 0123699998653
Q ss_pred ccccc-------cccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 289 CGIIW-------DKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 289 ~~~~~-------~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
..... ..++...+.+..++|+|||.+++....
T Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 263 GFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp CTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred CCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 31110 001223688899999999999876543
No 316
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.18 E-value=0.12 Score=49.00 Aligned_cols=83 Identities=19% Similarity=0.277 Sum_probs=49.7
Q ss_pred CCCCCccEEEecccc--c-----------cccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHH
Q 017377 276 YPSLSFDMVHCAQCG--I-----------IWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEF 342 (372)
Q Consensus 276 ~~~~sFDlV~~~~~~--~-----------~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l 342 (372)
+++++||+|++.--. . .|.......|.++.|+|+|||.+++.......... +. .....+..+.+.
T Consensus 29 l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~-~~-~~~~~~~~i~~~ 106 (323)
T 1boo_A 29 FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGV-PA-RSIYNFRVLIRM 106 (323)
T ss_dssp SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTE-EE-ECCHHHHHHHHH
T ss_pred CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCC-cc-cccchHHHHHHH
Confidence 457889999886211 0 11123446889999999999999998653311000 00 001234445555
Q ss_pred HHhcCeeEEeeecceEEEEecC
Q 017377 343 TEKICWSLIAQQDETFIWQKTV 364 (372)
Q Consensus 343 ~~~lcw~~~~~~~~~~iw~K~~ 364 (372)
.+..+|.+. +.++|+|+.
T Consensus 107 ~~~~Gf~~~----~~iiW~k~~ 124 (323)
T 1boo_A 107 IDEVGFFLA----EDFYWFNPS 124 (323)
T ss_dssp HHTTCCEEE----EEEEEECSS
T ss_pred HHhCCCEEE----EEEEEecCC
Confidence 577888765 456998875
No 317
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.96 E-value=0.088 Score=45.53 Aligned_cols=88 Identities=16% Similarity=0.209 Sum_probs=59.3
Q ss_pred CeEEEeCC--CCcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEe
Q 017377 218 QSVLDVGC--GFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~ 286 (372)
++||.+|+ |.|.....++.. | ..++++|.++...+.+++.+....+ +..... ...+.+|+|+.
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G---~~V~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~~D~vi~ 113 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIG---ARIYTTAGSDAKREMLSRLGVEYVG---DSRSVDFADEILELTDGYGVDVVLN 113 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHT---CEEEEEESSHHHHHHHHTTCCSEEE---ETTCSTHHHHHHHHTTTCCEEEEEE
T ss_pred CEEEEeeCCChHHHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHcCCCEEe---eCCcHHHHHHHHHHhCCCCCeEEEE
Confidence 78999995 456666666554 4 4578889999988888776654322 221111 12246999997
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 287 ~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
+.. . ..+.+..+.|+|||.+++...
T Consensus 114 ~~g-----~---~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 114 SLA-----G---EAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp CCC-----T---HHHHHHHHTEEEEEEEEECSC
T ss_pred CCc-----h---HHHHHHHHHhccCCEEEEEcC
Confidence 532 1 267888999999999998754
No 318
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.92 E-value=0.21 Score=47.60 Aligned_cols=92 Identities=15% Similarity=0.134 Sum_probs=63.1
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEee---ccC----C-CCCCCCccEEEec
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFI---SRQ----L-PYPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d---~~~----l-p~~~~sFDlV~~~ 287 (372)
.+||-+|+|. |.++..+++.. .. .|+++|.++...+.+++.|....+. .+ ..+ + ....+.||+|+-.
T Consensus 173 ~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~-~~~~~~~~~~~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEIGADLVLQ-ISKESPQEIARKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCSEEEE-CSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhCCCEEEc-CcccccchHHHHHHHHhCCCCCEEEEC
Confidence 7899999875 77788887752 23 6888999999999999888764332 11 000 0 0001469999865
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-. . ...+.+..++|+|||.+++...
T Consensus 250 ~g------~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 250 TG------A-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp SC------C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CC------C-hHHHHHHHHHhcCCCEEEEEec
Confidence 32 1 1257788899999999998764
No 319
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=93.82 E-value=0.12 Score=49.66 Aligned_cols=75 Identities=16% Similarity=0.066 Sum_probs=50.6
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC--CCeEEEEeec
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG--LPAMIGNFIS 271 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg--l~~~~~~~d~ 271 (372)
....+.|.+.+....+ +.......|||||.|.|.+|..|++... ...++++|+++.++...++.. -+..+...|+
T Consensus 38 ~~i~~~Iv~~~~l~~~--~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~ 114 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKT--YKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDP 114 (353)
T ss_dssp HHHHHHHHHHHCGGGT--CCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHTTTSSCEEECSCT
T ss_pred HHHHHHHHHhccCCcc--cCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhccCCCEEEEECCc
Confidence 4567788888765321 0000126899999999999999997521 235889999999988776642 2345555554
No 320
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.74 E-value=0.16 Score=48.24 Aligned_cols=90 Identities=20% Similarity=0.144 Sum_probs=64.4
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
.+||=+|+|. |.++..+++.. ...++++|.++...+.+++.|....+ .+...+ . ..+|+|+-.-...
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~v~--~~~~~~--~-~~~D~vid~~g~~----- 245 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALSMGVKHFY--TDPKQC--K-EELDFIISTIPTH----- 245 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHHTTCSEEE--SSGGGC--C-SCEEEEEECCCSC-----
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcCCCeec--CCHHHH--h-cCCCEEEECCCcH-----
Confidence 7899999875 77777777752 24688899999999999998877655 222222 2 2799998653211
Q ss_pred HHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 297 EGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 297 ~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
..+....+.|+|||.+++.....
T Consensus 246 --~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 246 --YDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp --CCHHHHHTTEEEEEEEEECCCCC
T ss_pred --HHHHHHHHHHhcCCEEEEECCCC
Confidence 14667889999999999876543
No 321
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.07 E-value=0.59 Score=44.73 Aligned_cols=94 Identities=21% Similarity=0.209 Sum_probs=64.6
Q ss_pred CeEEEeCCCC-cHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC--------CCCCCCCccEEEec
Q 017377 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ--------LPYPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~--------lp~~~~sFDlV~~~ 287 (372)
.+||=+|+|. |.++..+++. |. ..|+++|.++...+.+++.|....+. ....+ .....+.||+|+-.
T Consensus 184 ~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~-~~~~~~~~~i~~~~~~~~gg~Dvvid~ 260 (370)
T 4ej6_A 184 STVAILGGGVIGLLTVQLARLAGA--TTVILSTRQATKRRLAEEVGATATVD-PSAGDVVEAIAGPVGLVPGGVDVVIEC 260 (370)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHTCSEEEC-TTSSCHHHHHHSTTSSSTTCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHcCCCEEEC-CCCcCHHHHHHhhhhccCCCCCEEEEC
Confidence 7888899875 7777777775 32 26788999999999999988765432 11111 00223479999865
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
-. . ...+.+..+.|++||.+++.....
T Consensus 261 ~G------~-~~~~~~~~~~l~~~G~vv~~G~~~ 287 (370)
T 4ej6_A 261 AG------V-AETVKQSTRLAKAGGTVVILGVLP 287 (370)
T ss_dssp SC------C-HHHHHHHHHHEEEEEEEEECSCCC
T ss_pred CC------C-HHHHHHHHHHhccCCEEEEEeccC
Confidence 22 1 236788899999999999876543
No 322
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.98 E-value=0.49 Score=44.82 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=62.6
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeec-cCCC------CC---CCCccEEEe
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-RQLP------YP---SLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~-~~lp------~~---~~sFDlV~~ 286 (372)
.+||-+|+|. |.++..+++.. ...|+++|.++...+.+++.|....+. ... .+.. .. .+.+|+|+-
T Consensus 170 ~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~~~-~~~~~~~~~~i~~~~~~~~g~g~D~vid 246 (352)
T 1e3j_A 170 TTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNCGADVTLV-VDPAKEEESSIIERIRSAIGDLPNVTID 246 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEE-CCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHhCCCEEEc-CcccccHHHHHHHHhccccCCCCCEEEE
Confidence 7899999874 77777777652 234788999999999999888764332 211 1110 11 246999986
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 287 ~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.-. . ...+....++|+|||.+++...
T Consensus 247 ~~g------~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 247 CSG------N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp CSC------C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred CCC------C-HHHHHHHHHHHhcCCEEEEEec
Confidence 532 1 1257788899999999998764
No 323
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=92.96 E-value=0.52 Score=44.71 Aligned_cols=125 Identities=10% Similarity=0.048 Sum_probs=73.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEE-EEeeCCHHHHHHHHHcCCCeEEEEeeccCCC---CCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCV-AVYEATGSQVQLALERGLPAMIGNFISRQLP---YPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v-~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp---~~~~sFDlV~~~~~~~~~ 293 (372)
.+++|+-||.|.++..+...|+....+ .++|+++..++..+.+.... ....|...+. ++...+|+++...--..+
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCTTC
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCccCc
Confidence 589999999999999998887533446 78999999998777663222 2334555443 222368999965221222
Q ss_pred ----------cccH-HHHHHHHHh-cc-----cCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEe
Q 017377 294 ----------DKKE-GIFLIEADR-LL-----KPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIA 352 (372)
Q Consensus 294 ----------~~~~-~~~L~el~r-vL-----kPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~ 352 (372)
..+. ..++.++.| ++ +|- +++......- .....++.+....+++++.+..
T Consensus 90 s~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~--~~~lENV~gl-------~~~~~~~~i~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 90 NNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK--HIFIENVPLF-------KESLVFKEIYNILIKNQYYIKD 156 (327)
T ss_dssp SHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS--EEEEEECGGG-------GGSHHHHHHHHHHHHTTCEEEE
T ss_pred ccccCCCCCCCccccchhHHHHHHHHHHHhccCCC--EEEEEchhhh-------cChHHHHHHHHHHHhCCCEEEE
Confidence 1222 246667666 54 454 3333222211 1123466666656777776543
No 324
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.73 E-value=0.24 Score=46.50 Aligned_cols=89 Identities=16% Similarity=0.126 Sum_probs=60.6
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC-CC-------CCCCCccEEEec
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-LP-------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~-lp-------~~~~sFDlV~~~ 287 (372)
++||-+|+ |.|..+..++... ...++++|.++..++.+++.|....+ |..+ -. ...+.+|+|+.+
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~~d~vi~~ 221 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQIGFDAAF---NYKTVNSLEEALKKASPDGYDCYFDN 221 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEE---ETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred CEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCcEEE---ecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence 78999998 5677776666642 24678889999998888776654332 2221 11 112479999876
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-. . ..+.+..+.|+|||.+++...
T Consensus 222 ~g-----~---~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 222 VG-----G---EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp SC-----H---HHHHHHHTTEEEEEEEEECCC
T ss_pred CC-----h---HHHHHHHHHHhcCCEEEEEec
Confidence 43 1 247788899999999988654
No 325
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=92.60 E-value=0.64 Score=44.18 Aligned_cols=70 Identities=14% Similarity=0.076 Sum_probs=51.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC---CCCCCccEEEec
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP---YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp---~~~~sFDlV~~~ 287 (372)
-+++|+-||.|.+...+...|+....+.++|+++..++.-+.+.....+...|...+. ++...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEec
Confidence 4799999999999999988876445678999999999887776544434444555543 223368999864
No 326
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=92.57 E-value=0.16 Score=48.76 Aligned_cols=90 Identities=21% Similarity=0.214 Sum_probs=61.7
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEee---ccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI---SRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d---~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
.+||-+|+|. |.++..+++.. ...|+++|.++..++.+++.|....+...+ ...+. +.+|+|+-.-...
T Consensus 196 ~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g~~-- 268 (369)
T 1uuf_A 196 KKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVAAP-- 268 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCSSC--
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCCCH--
Confidence 7899999874 77777777652 245888999999999998888654432111 11121 5799998653311
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
..+.+..+.|+|||.+++...
T Consensus 269 -----~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 269 -----HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp -----CCHHHHHTTEEEEEEEEECCC
T ss_pred -----HHHHHHHHHhccCCEEEEecc
Confidence 135677899999999987654
No 327
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.56 E-value=0.75 Score=44.33 Aligned_cols=97 Identities=16% Similarity=0.090 Sum_probs=65.0
Q ss_pred CeEEEeCCCC-cHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC-CC------CCCCCccEEEecc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-LP------YPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~-lp------~~~~sFDlV~~~~ 288 (372)
.+||-+|+|. |.++..+++. |. ..|+++|.++..++.+++.|.. ..+..... +. .....+|+|+-.-
T Consensus 187 ~~VlV~GaG~vG~~aiqlAk~~Ga--~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~ 262 (398)
T 1kol_A 187 STVYVAGAGPVGLAAAASARLLGA--AVVIVGDLNPARLAHAKAQGFE--IADLSLDTPLHEQIAALLGEPEVDCAVDAV 262 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHcCCc--EEccCCcchHHHHHHHHhCCCCCCEEEECC
Confidence 7899999875 7888888875 32 2578899999999999988874 22221111 00 1124699998653
Q ss_pred ccc---------cccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 289 CGI---------IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 289 ~~~---------~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
... |. .++...+.+..++|++||.+++...
T Consensus 263 G~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 263 GFEARGHGHEGAKH-EAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp CTTCBCSSTTGGGS-BCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCcccccccccccc-cchHHHHHHHHHHHhcCCEEEEecc
Confidence 321 11 2233478889999999999988754
No 328
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.52 E-value=0.25 Score=47.17 Aligned_cols=93 Identities=15% Similarity=0.110 Sum_probs=64.0
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC------CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp------~~~~sFDlV~~~~~~ 290 (372)
.+||=+|+|. |.++..+++. ....++++|.++..++.+++.|....+. .+..++. .....+|+|+-.-.
T Consensus 191 ~~VlV~G~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~~g~g~D~vid~~g- 266 (363)
T 3uog_A 191 DRVVVQGTGGVALFGLQIAKA--TGAEVIVTSSSREKLDRAFALGADHGIN-RLEEDWVERVYALTGDRGADHILEIAG- 266 (363)
T ss_dssp CEEEEESSBHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEEEEETT-
T ss_pred CEEEEECCCHHHHHHHHHHHH--cCCEEEEEecCchhHHHHHHcCCCEEEc-CCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 7899999875 7777777765 2346888999999999999888765443 1111110 12347999986533
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
. ..+....+.|+|||.+++.....
T Consensus 267 ---~----~~~~~~~~~l~~~G~iv~~G~~~ 290 (363)
T 3uog_A 267 ---G----AGLGQSLKAVAPDGRISVIGVLE 290 (363)
T ss_dssp ---S----SCHHHHHHHEEEEEEEEEECCCS
T ss_pred ---h----HHHHHHHHHhhcCCEEEEEecCC
Confidence 1 14667788999999999886543
No 329
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.09 E-value=0.34 Score=45.97 Aligned_cols=93 Identities=17% Similarity=0.161 Sum_probs=63.5
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC-----C-CCCCCccEEEeccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQL-----P-YPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l-----p-~~~~sFDlV~~~~~ 289 (372)
.+||=+|+|. |.++..+++.. .. .|+++|.++..++.+++.|....+. ....++ . .....||+|+-.-.
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 168 DTVCVIGIGPVGLMSVAGANHL--GAGRIFAVGSRKHCCDIALEYGATDIIN-YKNGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCSSEEEECCCHHHHHHHHHHTCCEEEC-GGGSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCcEEEEECCCHHHHHHHHHhCCceEEc-CCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 7899999875 77777777752 23 5788999999999999988764432 111111 0 12346999986532
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. + ..+.+..+.|+|||.+++....
T Consensus 245 ~----~---~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 245 D----V---HTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp C----T---THHHHHHHHEEEEEEEEECCCC
T ss_pred C----h---HHHHHHHHHHhcCCEEEEeccc
Confidence 1 1 2678888999999999987643
No 330
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.07 E-value=0.41 Score=45.06 Aligned_cols=91 Identities=18% Similarity=0.152 Sum_probs=64.6
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC------CCCCccEEEecccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY------PSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~------~~~sFDlV~~~~~~ 290 (372)
.+||-+|+|. |.++..+++.. ...++++|.++...+.+++.|....+. .....+ ..+.+|+|+-...
T Consensus 168 ~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~i~---~~~~~~~~~~~~~~g~~d~vid~~g- 241 (340)
T 3s2e_A 168 QWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARRLGAEVAVN---ARDTDPAAWLQKEIGGAHGVLVTAV- 241 (340)
T ss_dssp SEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEE---TTTSCHHHHHHHHHSSEEEEEESSC-
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCEEEe---CCCcCHHHHHHHhCCCCCEEEEeCC-
Confidence 7899899985 88888888762 346889999999999999988765432 221111 0136888875421
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
....+....+.|+|||.+++....
T Consensus 242 ------~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 242 ------SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp ------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred ------CHHHHHHHHHHhccCCEEEEeCCC
Confidence 123678889999999999987643
No 331
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=92.05 E-value=0.43 Score=46.23 Aligned_cols=124 Identities=9% Similarity=-0.033 Sum_probs=77.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC--------CCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY--------PSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~--------~~~sFDlV~~~~~ 289 (372)
.+++|+-||.|.++..+...|+. .+.++|+++..++..+.+-....+...|...+.. ....+|+|+...-
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~--~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpP 80 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFD--VKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPP 80 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCE--EEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCC
T ss_pred CeEEEEccCcCHHHHHHHHCCCc--EEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEecCC
Confidence 47999999999999999888853 4678999999998888775555555566655531 3467999997521
Q ss_pred cccc-------cccHH-HHHH---HHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeE
Q 017377 290 GIIW-------DKKEG-IFLI---EADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSL 350 (372)
Q Consensus 290 ~~~~-------~~~~~-~~L~---el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~ 350 (372)
-..+ .+++. .++. ++...++|--.++=.++..-. ......++.+. ..+++++.+
T Consensus 81 CQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s------~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 81 CQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQ------EKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp CCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTC------GGGHHHHHHHH-HHHHTTEEE
T ss_pred CCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhc------cCcHHHHHHHH-HHHcCCCcc
Confidence 1111 12222 3333 455557886444433343322 13334566666 457777776
No 332
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=91.87 E-value=0.3 Score=46.60 Aligned_cols=57 Identities=11% Similarity=0.039 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHH
Q 017377 194 KDYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLAL 258 (372)
Q Consensus 194 ~~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~ 258 (372)
.-..+++.+.+...++ ..++|..||.|..+..+++.-.....++|+|.++.+++.|+
T Consensus 43 pVLl~Evl~~L~i~pg--------giyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 43 TVLLDEAVNGLNIRPD--------GIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp CTTTHHHHHHTCCCTT--------CEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred cccHHHHHHhhCCCCC--------CEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 3456677777776666 78999999999999999987334467999999999999884
No 333
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=91.58 E-value=0.44 Score=43.39 Aligned_cols=50 Identities=8% Similarity=0.049 Sum_probs=32.8
Q ss_pred HHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEeeecceEEEEecC
Q 017377 298 GIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQQDETFIWQKTV 364 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~~~~~~iw~K~~ 364 (372)
...|.++.++|+|||.+++... +.. ...+.......+|... +.++|+|+.
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~~-----------d~~--~~~~~~~~~~~gf~~~----~~iiW~K~~ 103 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFNT-----------PFN--CAFICQYLVSKGMIFQ----NWITWDKRD 103 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC-----------HHH--HHHHHHHHHHTTCEEE----EEEEECCCC
T ss_pred HHHHHHHHHHhcCCeEEEEEcC-----------cHH--HHHHHHHHHhhcccee----EEEEEEecC
Confidence 4578889999999999998742 111 1223334455677554 457999875
No 334
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.88 E-value=0.84 Score=42.93 Aligned_cols=97 Identities=23% Similarity=0.200 Sum_probs=52.7
Q ss_pred CeEEEeCCCCcHHHHHHH----hcCC-ceeEEEEeeCC------------HHHHHHHHHc-----CCCe--EEEEeeccC
Q 017377 218 QSVLDVGCGFGSFGAHLV----SLKL-MAVCVAVYEAT------------GSQVQLALER-----GLPA--MIGNFISRQ 273 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~----~~~~-~~~~v~gvD~s------------~~~v~~A~~r-----gl~~--~~~~~d~~~ 273 (372)
-+|||+|-|+|....... +.+. ....++.+|.. ....+...++ +-.+ .+...|+..
T Consensus 98 ~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~ 177 (308)
T 3vyw_A 98 IRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARK 177 (308)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHH
T ss_pred cEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHH
Confidence 579999999998643322 2222 23445666642 1112222222 1111 222333322
Q ss_pred -CC-CCCCCccEEEeccccccccccH----HHHHHHHHhcccCCeEEEE
Q 017377 274 -LP-YPSLSFDMVHCAQCGIIWDKKE----GIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 274 -lp-~~~~sFDlV~~~~~~~~~~~~~----~~~L~el~rvLkPGG~lvi 316 (372)
++ +++..||+|+--. +-. ..+| ..++..|.++++|||.|+-
T Consensus 178 ~l~~l~~~~~Da~flDg-FsP-~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 178 RIKEVENFKADAVFHDA-FSP-YKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HGGGCCSCCEEEEEECC-SCT-TTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHhhhcccceeEEEeCC-CCc-ccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 22 3456799998753 111 1222 3699999999999998763
No 335
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=90.78 E-value=0.52 Score=44.36 Aligned_cols=91 Identities=13% Similarity=0.111 Sum_probs=61.2
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHH-HcCCCeEEEEeecc-CCC-----CCCCCccEEEecc
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLAL-ERGLPAMIGNFISR-QLP-----YPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~-~rgl~~~~~~~d~~-~lp-----~~~~sFDlV~~~~ 288 (372)
.+||-+|+ |.|..+..++... ...++++|.++..++.++ +.|....+ +.... .+. ...+.+|+|+.+-
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~~d~vi~~~ 233 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKTKFGFDDAF-NYKEESDLTAALKRCFPNGIDIYFENV 233 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTSCCSEEE-ETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCceEE-ecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence 78999997 5677777777652 246888999999998887 46654332 21110 110 0124699998763
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. . ..+....+.|++||.+++...
T Consensus 234 g-----~---~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 234 G-----G---KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp C-----H---HHHHHHHTTEEEEEEEEECCC
T ss_pred C-----H---HHHHHHHHHHhcCCEEEEEcc
Confidence 3 1 267888999999999998653
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.76 E-value=0.99 Score=42.46 Aligned_cols=91 Identities=15% Similarity=0.132 Sum_probs=62.4
Q ss_pred CeEEEeCCC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCC------CCCccEEEecccc
Q 017377 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYP------SLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~------~~sFDlV~~~~~~ 290 (372)
.+||-+|+| .|..+..+++.. ...++++|.++..++.+++.|....+ +.....+. .+.+|+|+-+-.
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~~---d~~~~~~~~~~~~~~~~~d~vid~~g- 239 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELGADLVV---NPLKEDAAKFMKEKVGGVHAAVVTAV- 239 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEEE---CTTTSCHHHHHHHHHSSEEEEEESSC-
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHCCCCEEe---cCCCccHHHHHHHHhCCCCEEEECCC-
Confidence 789999986 477777777652 24688899999999999887765332 22211110 046899986532
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. ...+.+..+.|++||.+++....
T Consensus 240 -----~-~~~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 240 -----S-KPAFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp -----C-HHHHHHHHHHEEEEEEEEECCCC
T ss_pred -----C-HHHHHHHHHHhhcCCEEEEeccc
Confidence 1 12677888999999999886543
No 337
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=90.75 E-value=0.42 Score=44.87 Aligned_cols=89 Identities=15% Similarity=0.103 Sum_probs=61.9
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHH-HHcCCCeEEEEeeccCCC-------CCCCCccEEEec
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLA-LERGLPAMIGNFISRQLP-------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A-~~rgl~~~~~~~d~~~lp-------~~~~sFDlV~~~ 287 (372)
++||-+|+ |.|..+..++.. ....++++|.++...+.+ ++.|....+. ..... ...+.+|+|+.+
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARL--KGCRVVGIAGGAEKCRFLVEELGFDGAID---YKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCCSEEEE---TTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHcCCCEEEE---CCCHHHHHHHHHhcCCCceEEEEC
Confidence 78999998 567777777765 224688899999999888 6667654332 11111 113469999875
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-. . ..+....+.|++||.+++...
T Consensus 226 ~g-----~---~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 226 VG-----G---EILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp SC-----H---HHHHHHHTTEEEEEEEEECCC
T ss_pred CC-----c---chHHHHHHHHhhCCEEEEEee
Confidence 33 1 267888999999999998653
No 338
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.52 E-value=0.37 Score=46.09 Aligned_cols=94 Identities=12% Similarity=-0.036 Sum_probs=62.6
Q ss_pred CeEEEeCCCC-cHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeec-cCC-----CCCCCCccEEEeccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-RQL-----PYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~-~~l-----p~~~~sFDlV~~~~~ 289 (372)
.+||=+|+|. |.++..+++. +. ..|+++|.++...+.+++.|....+..-+. .++ ....+.+|+|+-.-.
T Consensus 193 ~~VlV~GaG~vG~~aiqlak~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 193 STCAVFGLGGVGFSAIVGCKAAGA--SRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC--SEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CeEEEECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 7899999874 7777777765 32 157889999999999998887643321110 011 011237999986522
Q ss_pred cccccccHHHHHHHHHhcccCC-eEEEEEeCC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPG-GYFVLTSPE 320 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPG-G~lvis~p~ 320 (372)
. ...+.+..+.|++| |.+++....
T Consensus 271 ~-------~~~~~~~~~~l~~~~G~iv~~G~~ 295 (373)
T 1p0f_A 271 R-------IETMMNALQSTYCGSGVTVVLGLA 295 (373)
T ss_dssp C-------HHHHHHHHHTBCTTTCEEEECCCC
T ss_pred C-------HHHHHHHHHHHhcCCCEEEEEccC
Confidence 1 13678889999999 999987643
No 339
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.37 E-value=0.29 Score=46.29 Aligned_cols=94 Identities=14% Similarity=0.098 Sum_probs=63.1
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEee----ccCCCCCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI----SRQLPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d----~~~lp~~~~sFDlV~~~~~~~~ 292 (372)
.+||-+|+|. |.++..+++.......|+++|.++...+.+++.|....+..-+ ...+. ....+|+|+-.-..
T Consensus 172 ~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~~g~-- 248 (344)
T 2h6e_A 172 PVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDLVGT-- 248 (344)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEESSCC--
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEECCCC--
Confidence 7899999874 6777777765200346889999999999999888654332111 00111 12369999875321
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
...+....++|+|||.+++...
T Consensus 249 -----~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 249 -----EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp -----HHHHHHHHHHEEEEEEEEECCC
T ss_pred -----hHHHHHHHHHhhcCCEEEEeCC
Confidence 1267788899999999998754
No 340
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.34 E-value=0.33 Score=45.80 Aligned_cols=90 Identities=19% Similarity=0.219 Sum_probs=61.1
Q ss_pred CeEEEeCCC--CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVGCG--FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG--~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
.+||-+|+| .|..+..+++. ....++++|.++..++.+++.|....+. ..... .....+|+|+.+
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~lga~~~~~---~~~~~~~~~~~~~~~~~g~Dvvid~ 220 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQI--LNFRLIAVTRNNKHTEELLRLGAAYVID---TSTAPLYETVMELTNGIGADAAIDS 220 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHHHTCSEEEE---TTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CEEEEeCCccHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhCCCcEEEe---CCcccHHHHHHHHhCCCCCcEEEEC
Confidence 789999987 57777777765 2246888899988889998888764432 21111 123479999875
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
-.. . .+.+..+.|+|||.+++....
T Consensus 221 ~g~------~--~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 221 IGG------P--DGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp SCH------H--HHHHHHHTEEEEEEEEECCCT
T ss_pred CCC------h--hHHHHHHHhcCCCEEEEEeec
Confidence 321 1 223445899999999987654
No 341
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=90.32 E-value=0.37 Score=45.59 Aligned_cols=94 Identities=16% Similarity=0.162 Sum_probs=61.9
Q ss_pred CeEEEeCCC--CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC-----CCCC-CCccEEEeccc
Q 017377 218 QSVLDVGCG--FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL-----PYPS-LSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG--~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l-----p~~~-~sFDlV~~~~~ 289 (372)
.+||-+|+| .|..+..++... ....++++|.++...+.+++.|....+. ...... .... +.+|+|+.+-.
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~~~g 249 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRAGADYVIN-ASMQDPLAEIRRITESKGVDAVIDLNN 249 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CEEEEECCCccHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCEEec-CCCccHHHHHHHHhcCCCceEEEECCC
Confidence 789999998 566666666541 0246888999999999888777654332 111110 0111 47999987633
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. ...+.+..++|+|||.+++....
T Consensus 250 ~-------~~~~~~~~~~l~~~G~iv~~g~~ 273 (347)
T 1jvb_A 250 S-------EKTLSVYPKALAKQGKYVMVGLF 273 (347)
T ss_dssp C-------HHHHTTGGGGEEEEEEEEECCSS
T ss_pred C-------HHHHHHHHHHHhcCCEEEEECCC
Confidence 1 12677788999999999886543
No 342
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.19 E-value=0.34 Score=46.39 Aligned_cols=93 Identities=13% Similarity=0.005 Sum_probs=62.4
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC-------CCCCccEEEecc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQLPY-------PSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~-------~~~sFDlV~~~~ 288 (372)
.+||-+|+|. |.++..+++.. .. .|+++|.++...+.+++.|....+. .......+ ..+.+|+|+-.-
T Consensus 194 ~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~~~~~~~~~~g~D~vid~~ 270 (374)
T 1cdo_A 194 STCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKVFGATDFVN-PNDHSEPISQVLSKMTNGGVDFSLECV 270 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCCEEEC-GGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCHHHHHHHHHhCCceEEe-ccccchhHHHHHHHHhCCCCCEEEECC
Confidence 7899999864 77777777652 23 5888999999999999888754332 11100111 123699998653
Q ss_pred ccccccccHHHHHHHHHhcccCC-eEEEEEeCC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPG-GYFVLTSPE 320 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPG-G~lvis~p~ 320 (372)
.. ...+....+.|+|| |.+++....
T Consensus 271 g~-------~~~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 271 GN-------VGVMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp CC-------HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CC-------HHHHHHHHHHhhcCCcEEEEEcCC
Confidence 21 13678889999999 999987643
No 343
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.14 E-value=0.41 Score=45.79 Aligned_cols=92 Identities=11% Similarity=0.001 Sum_probs=61.9
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEeec--cCC-----CCCCCCccEEEecc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFIS--RQL-----PYPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d~--~~l-----p~~~~sFDlV~~~~ 288 (372)
.+||-+|+|. |.++..+++.. .. .|+++|.++...+.+++.|....+. ... ..+ ....+.+|+|+-.-
T Consensus 193 ~~VlV~GaG~vG~~a~qla~~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~~~~~~~~~~g~D~vid~~ 269 (374)
T 2jhf_A 193 STCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEVGATECVN-PQDYKKPIQEVLTEMSNGGVDFSFEVI 269 (374)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEEC-GGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhCCceEec-ccccchhHHHHHHHHhCCCCcEEEECC
Confidence 7899999874 67777777652 23 5888999999999998888754332 111 001 01124799998653
Q ss_pred ccccccccHHHHHHHHHhcccCC-eEEEEEeC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPG-GYFVLTSP 319 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPG-G~lvis~p 319 (372)
. . ...+.+..+.|++| |.+++...
T Consensus 270 g------~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 270 G------R-LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp C------C-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred C------C-HHHHHHHHHHhhcCCcEEEEecc
Confidence 2 1 12677888999999 99998754
No 344
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=90.09 E-value=2.1 Score=40.57 Aligned_cols=101 Identities=11% Similarity=0.054 Sum_probs=61.7
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc---C-----------------------CCeEEEEee
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER---G-----------------------LPAMIGNFI 270 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r---g-----------------------l~~~~~~~d 270 (372)
...|+.+|||..+....|...+. ...+.-+|. +..++.-++. . -...+...|
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 36899999999999999887532 356777787 5555432221 0 123444444
Q ss_pred ccCCC--------C-CCCCccEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEeCC
Q 017377 271 SRQLP--------Y-PSLSFDMVHCAQCGIIWDKKE-GIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 271 ~~~lp--------~-~~~sFDlV~~~~~~~~~~~~~-~~~L~el~rvLkPGG~lvis~p~ 320 (372)
..+.. . ......++++..++..+.++. ..+|..+.... |+|.+++.++.
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 44321 1 335567888876666665433 35677777766 78887765543
No 345
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=89.90 E-value=0.4 Score=45.77 Aligned_cols=92 Identities=13% Similarity=0.003 Sum_probs=62.0
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEeec--cCC-----CCCCCCccEEEecc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFIS--RQL-----PYPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d~--~~l-----p~~~~sFDlV~~~~ 288 (372)
.+||-+|+|. |.++..+++. ... .|+++|.++...+.+++.|....+. ... ..+ ....+.+|+|+-.-
T Consensus 192 ~~VlV~GaG~vG~~avqla~~--~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~~~v~~~~~~g~D~vid~~ 268 (373)
T 2fzw_A 192 SVCAVFGLGGVGLAVIMGCKV--AGASRIIGVDINKDKFARAKEFGATECIN-PQDFSKPIQEVLIEMTDGGVDYSFECI 268 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCSEEEEECSCGGGHHHHHHHTCSEEEC-GGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHH--cCCCeEEEEcCCHHHHHHHHHcCCceEec-cccccccHHHHHHHHhCCCCCEEEECC
Confidence 7899999864 6777777765 223 5788999999999999888754332 111 000 01123799998653
Q ss_pred ccccccccHHHHHHHHHhcccCC-eEEEEEeC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPG-GYFVLTSP 319 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPG-G~lvis~p 319 (372)
.. ...+.+..+.|+|| |.+++...
T Consensus 269 g~-------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 269 GN-------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CC-------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred Cc-------HHHHHHHHHhhccCCcEEEEEec
Confidence 21 12678889999999 99998764
No 346
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.70 E-value=0.65 Score=43.80 Aligned_cols=89 Identities=12% Similarity=0.107 Sum_probs=62.6
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
.+||-+|+ |.|..+..++... ...++++|.++..++.+++.|....+ +..... .....+|+|+.+
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~ga~~~~---d~~~~~~~~~~~~~~~~~~~d~vi~~ 242 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKALGADETV---NYTHPDWPKEVRRLTGGKGADKVVDH 242 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEEE---ETTSTTHHHHHHHHTTTTCEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCEEE---cCCcccHHHHHHHHhCCCCceEEEEC
Confidence 78999998 6788888887752 24688899999999988877765432 222111 123479999876
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-. - ..+....+.|++||.+++...
T Consensus 243 ~g-~-------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 243 TG-A-------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp SC-S-------SSHHHHHHHEEEEEEEEESSC
T ss_pred CC-H-------HHHHHHHHhhccCCEEEEEec
Confidence 43 1 146677889999999988654
No 347
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=89.48 E-value=0.48 Score=45.43 Aligned_cols=94 Identities=13% Similarity=0.040 Sum_probs=63.0
Q ss_pred CeEEEeCCC-CcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEee-ccCC-----CCCCCCccEEEeccc
Q 017377 218 QSVLDVGCG-FGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFI-SRQL-----PYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG-~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d-~~~l-----p~~~~sFDlV~~~~~ 289 (372)
.+||=+|+| .|.++..+++. +. ..|+++|.++..++.+++.|....+...+ ...+ ...++.+|+|+-.-.
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga--~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g 272 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGA--SRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG 272 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTC--SCEEEECSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC--CeEEEEcCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECCC
Confidence 688989987 37777777765 32 15788999999999999888765332110 0010 012347999986522
Q ss_pred cccccccHHHHHHHHHhcccCC-eEEEEEeCC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPG-GYFVLTSPE 320 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPG-G~lvis~p~ 320 (372)
. ...+....+.|++| |.+++....
T Consensus 273 ------~-~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 273 ------N-VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp ------C-HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred ------C-HHHHHHHHHHhhccCCEEEEEccc
Confidence 1 13678889999997 999987653
No 348
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=89.47 E-value=0.44 Score=45.07 Aligned_cols=93 Identities=16% Similarity=0.150 Sum_probs=61.4
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEee-ccCCC-----CCCCCccEEEeccc
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI-SRQLP-----YPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d-~~~lp-----~~~~sFDlV~~~~~ 289 (372)
.+||-+|+ |.|..+..++... ...++++|.++...+.+++.|....+ +.. ...+. ..++.+|+|+.+..
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~~g~~~~~-d~~~~~~~~~~~~~~~~~~~D~vi~~~g 247 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRSIGGEVFI-DFTKEKDIVGAVLKATDGGAHGVINVSV 247 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHHTTCCEEE-ETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHHcCCceEE-ecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence 78999998 4677777777642 24678889888888888877765332 211 11110 01126999987633
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. ...+....+.|++||.+++....
T Consensus 248 ~-------~~~~~~~~~~l~~~G~iv~~g~~ 271 (347)
T 2hcy_A 248 S-------EAAIEASTRYVRANGTTVLVGMP 271 (347)
T ss_dssp C-------HHHHHHHTTSEEEEEEEEECCCC
T ss_pred c-------HHHHHHHHHHHhcCCEEEEEeCC
Confidence 1 13678889999999999887643
No 349
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=89.46 E-value=2.1 Score=40.55 Aligned_cols=94 Identities=13% Similarity=0.117 Sum_probs=61.3
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeE-EEEeeCCHHHHHHHHHcCCCeEEEEeec---cCC------CCCCCCccEEEe
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVC-VAVYEATGSQVQLALERGLPAMIGNFIS---RQL------PYPSLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~-v~gvD~s~~~v~~A~~rgl~~~~~~~d~---~~l------p~~~~sFDlV~~ 286 (372)
.+||=+|+|. |.++..+++.. ... |+++|.++.-.+.+++.+-.+.....+. .++ -.....+|+|+-
T Consensus 181 ~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid 258 (363)
T 3m6i_A 181 DPVLICGAGPIGLITMLCAKAA--GACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALE 258 (363)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEEEE
Confidence 6788899875 77777777752 233 7788999999999988732222221110 000 012457999986
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 287 ~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.-. . ...+....++|++||.+++....
T Consensus 259 ~~g------~-~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 259 CTG------V-ESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp CSC------C-HHHHHHHHHHSCTTCEEEECCCC
T ss_pred CCC------C-hHHHHHHHHHhcCCCEEEEEccC
Confidence 522 1 12677888999999999987653
No 350
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=89.40 E-value=0.56 Score=44.24 Aligned_cols=94 Identities=15% Similarity=0.119 Sum_probs=65.1
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC------CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp------~~~~sFDlV~~~~~~ 290 (372)
.+||=+|+|. |.++..+++.- -...|+++|.++.-.+.+++.|....+.. + .+.. .....+|+|+-.-.
T Consensus 173 ~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~-~-~~~~~~v~~~t~g~g~d~v~d~~G- 248 (345)
T 3jv7_A 173 STAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALAREVGADAAVKS-G-AGAADAIRELTGGQGATAVFDFVG- 248 (345)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHTTCSEEEEC-S-TTHHHHHHHHHGGGCEEEEEESSC-
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcC-C-CcHHHHHHHHhCCCCCeEEEECCC-
Confidence 7899999875 77777777651 13568899999999999999887654431 1 1100 01236899886522
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
. ...+....+.|+|||.+++.....
T Consensus 249 -----~-~~~~~~~~~~l~~~G~iv~~G~~~ 273 (345)
T 3jv7_A 249 -----A-QSTIDTAQQVVAVDGHISVVGIHA 273 (345)
T ss_dssp -----C-HHHHHHHHHHEEEEEEEEECSCCT
T ss_pred -----C-HHHHHHHHHHHhcCCEEEEECCCC
Confidence 1 126788899999999999876543
No 351
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=89.29 E-value=0.41 Score=45.84 Aligned_cols=92 Identities=13% Similarity=0.061 Sum_probs=62.0
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC-------CCCCCccEEEecc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQLP-------YPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp-------~~~~sFDlV~~~~ 288 (372)
.+||=+|+|. |.++..+++.. .. .|+++|.++...+.+++.|....+. .....-. ...+.+|+|+-.-
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~-~~~~~~~~~~~v~~~~~~g~Dvvid~~ 273 (376)
T 1e3i_A 197 STCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKALGATDCLN-PRELDKPVQDVITELTAGGVDYSLDCA 273 (376)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEEC-GGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhCCcEEEc-cccccchHHHHHHHHhCCCccEEEECC
Confidence 7899999874 77777777752 23 5888999999999998888754332 1110011 1123699998652
Q ss_pred ccccccccHHHHHHHHHhcccCC-eEEEEEeC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPG-GYFVLTSP 319 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPG-G~lvis~p 319 (372)
. . ...+.+..+.|++| |.+++...
T Consensus 274 G------~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 274 G------T-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp C------C-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred C------C-HHHHHHHHHHhhcCCCEEEEECC
Confidence 2 1 13678889999999 99988654
No 352
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=88.81 E-value=0.29 Score=45.63 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=58.7
Q ss_pred CeEEEeCCC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 218 ~~VLDIGCG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
.+||=+|+| .|.++..+++. ....+++++ ++...+.+++.|....+ + |...+ .+.+|+|+-.-..
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~--~Ga~Vi~~~-~~~~~~~~~~lGa~~v~-~-d~~~v---~~g~Dvv~d~~g~------ 209 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNN--AGYVVDLVS-ASLSQALAAKRGVRHLY-R-EPSQV---TQKYFAIFDAVNS------ 209 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCEEEEEC-SSCCHHHHHHHTEEEEE-S-SGGGC---CSCEEEEECC---------
T ss_pred CEEEEECCCHHHHHHHHHHHH--cCCEEEEEE-ChhhHHHHHHcCCCEEE-c-CHHHh---CCCccEEEECCCc------
Confidence 789999996 47777888775 224688888 88888999888865444 2 23333 5679999864221
Q ss_pred HHHHHHHHHhcccCCeEEEEEeC
Q 017377 297 EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 297 ~~~~L~el~rvLkPGG~lvis~p 319 (372)
..+.+..+.|+|||.++....
T Consensus 210 --~~~~~~~~~l~~~G~~v~~g~ 230 (315)
T 3goh_A 210 --QNAAALVPSLKANGHIICIQD 230 (315)
T ss_dssp ------TTGGGEEEEEEEEEECC
T ss_pred --hhHHHHHHHhcCCCEEEEEeC
Confidence 123567899999999998743
No 353
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=88.43 E-value=0.73 Score=43.06 Aligned_cols=90 Identities=12% Similarity=0.025 Sum_probs=63.0
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
.+||=+|+ |.|..+..+++. ....+++++.++..++.+++.|....+. ..... .....+|+|+.+
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~---~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKA--LGAKLIGTVSSPEKAAHAKALGAWETID---YSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHTCSEEEE---TTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCCEEEe---CCCccHHHHHHHHhCCCCceEEEEC
Confidence 78999983 467777777765 2246888999999999999888654432 11111 123579999876
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
-.. ..+....+.|+|||.+++....
T Consensus 217 ~g~--------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 217 VGQ--------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp SCG--------GGHHHHHTTEEEEEEEEECCCT
T ss_pred CCh--------HHHHHHHHHhcCCCEEEEEecC
Confidence 331 1567788999999999987654
No 354
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.14 E-value=0.31 Score=46.41 Aligned_cols=93 Identities=23% Similarity=0.258 Sum_probs=60.6
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeecc-CC--CCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISR-QL--PYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~-~l--p~~~~sFDlV~~~~~~~~~ 293 (372)
.+||-+|+|. |.++..+++. ....|+++|.++..++.+++.|....+. .... +. ... +.||+|+..-...
T Consensus 181 ~~VlV~GaG~vG~~~~qlak~--~Ga~Vi~~~~~~~~~~~~~~lGa~~v~~-~~~~~~~~~~~~-~~~D~vid~~g~~-- 254 (360)
T 1piw_A 181 KKVGIVGLGGIGSMGTLISKA--MGAETYVISRSSRKREDAMKMGADHYIA-TLEEGDWGEKYF-DTFDLIVVCASSL-- 254 (360)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSSTTHHHHHHHTCSEEEE-GGGTSCHHHHSC-SCEEEEEECCSCS--
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHcCCCEEEc-CcCchHHHHHhh-cCCCEEEECCCCC--
Confidence 7899999863 6777777765 2245888999988889998888654432 1111 10 011 4799998763320
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. ...+.+..++|+|||.+++...
T Consensus 255 -~--~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 255 -T--DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp -T--TCCTTTGGGGEEEEEEEEECCC
T ss_pred -c--HHHHHHHHHHhcCCCEEEEecC
Confidence 0 0134567789999999987654
No 355
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.00 E-value=2.1 Score=40.59 Aligned_cols=91 Identities=15% Similarity=0.101 Sum_probs=63.2
Q ss_pred CeEEEeC--CCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC-----CCCCCCccEEEecccc
Q 017377 218 QSVLDVG--CGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL-----PYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIG--CG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l-----p~~~~sFDlV~~~~~~ 290 (372)
.+||=+| .|.|..+..+++.. ...+++++.++...+.+++.|....+. .+...+ ....+.+|+|+.+-.
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~~g~D~vid~~g- 240 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKSLGCDRPIN-YKTEPVGTVLKQEYPEGVDVVYESVG- 240 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHCTTCEEEEEECSC-
T ss_pred CEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCCcEEEe-cCChhHHHHHHHhcCCCCCEEEECCC-
Confidence 7899999 46788888888762 246888999999999998877654332 111110 011246999987633
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. ..+..+.+.|++||.+++...
T Consensus 241 ----~---~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 241 ----G---AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp ----T---HHHHHHHHHEEEEEEEEECCC
T ss_pred ----H---HHHHHHHHHHhcCCEEEEEeC
Confidence 1 367788999999999988654
No 356
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=87.97 E-value=0.84 Score=43.30 Aligned_cols=89 Identities=18% Similarity=0.246 Sum_probs=61.0
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
.+||-+|+ |.|..+..++... ...+++++.++...+.+++.|....+ +..... .....+|+|+.+
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~~~---d~~~~~~~~~~~~~~~~~~~D~vi~~ 246 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNGAHEVF---NHREVNYIDKIKKYVGEKGIDIIIEM 246 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEE---ETTSTTHHHHHHHHHCTTCEEEEEES
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHcCCCEEE---eCCCchHHHHHHHHcCCCCcEEEEEC
Confidence 78999997 5677777776652 24688899999999988887765332 222111 123469999876
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-. ...+.+..+.|+|||.+++...
T Consensus 247 ~G--------~~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 247 LA--------NVNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp CH--------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CC--------hHHHHHHHHhccCCCEEEEEec
Confidence 33 1256778899999999998764
No 357
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=87.96 E-value=1.3 Score=41.73 Aligned_cols=79 Identities=18% Similarity=0.209 Sum_probs=43.1
Q ss_pred CCCCccEEEecccc----------ccccccHHHHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhc
Q 017377 277 PSLSFDMVHCAQCG----------IIWDKKEGIFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKI 346 (372)
Q Consensus 277 ~~~sFDlV~~~~~~----------~~~~~~~~~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~l 346 (372)
++++||+|++.--. ..|.......|.++.++|+|||.+++.......... +. .....+.+.....
T Consensus 55 ~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~----~~-~~l~~l~~~i~~~ 129 (319)
T 1eg2_A 55 PDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEA----GS-GDLISIISHMRQN 129 (319)
T ss_dssp CTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCT----TB-CCHHHHHHHHHHH
T ss_pred ccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCccccccc----cc-ccHHHHHHHHhCc
Confidence 45677777774110 111122345788899999999999998653221000 00 0012223333444
Q ss_pred C-eeEEeeecceEEEEecC
Q 017377 347 C-WSLIAQQDETFIWQKTV 364 (372)
Q Consensus 347 c-w~~~~~~~~~~iw~K~~ 364 (372)
+ |... ..+||+|+.
T Consensus 130 G~~~~~----~~IIW~K~~ 144 (319)
T 1eg2_A 130 SKMLLA----NLIIWNYPN 144 (319)
T ss_dssp CCCEEE----EEEEEECSC
T ss_pred ccceeE----EEEEEECCC
Confidence 5 6665 356898875
No 358
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.62 E-value=0.8 Score=42.72 Aligned_cols=89 Identities=16% Similarity=0.039 Sum_probs=60.2
Q ss_pred CeEEEeC--CCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVG--CGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIG--CG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
++||-+| .|.|..+..++.. ....++++|.++...+.+++.+....+ +..+.. ...+.+|+|+.+
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~D~vi~~ 216 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKA--LGAKLIGTVGTAQKAQSALKAGAWQVI---NYREEDLVERLKEITGGKKVRVVYDS 216 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHcCCCEEE---ECCCccHHHHHHHHhCCCCceEEEEC
Confidence 7899999 4566666666654 224678889999988888877765332 211111 123469999876
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-. ...+....+.|++||.+++...
T Consensus 217 ~g--------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 217 VG--------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp SC--------GGGHHHHHHTEEEEEEEEECCC
T ss_pred Cc--------hHHHHHHHHHhcCCCEEEEEec
Confidence 33 1256788899999999988764
No 359
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=87.20 E-value=0.83 Score=44.59 Aligned_cols=44 Identities=20% Similarity=0.136 Sum_probs=34.8
Q ss_pred CCCeEEEeCCCCcHHHHHHH-hcCCceeEEEEeeCCHHHHHHHHH
Q 017377 216 GVQSVLDVGCGFGSFGAHLV-SLKLMAVCVAVYEATGSQVQLALE 259 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~-~~~~~~~~v~gvD~s~~~v~~A~~ 259 (372)
...+|+|||++.|.++..++ ..+.....|+++|+++...+..++
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~ 270 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQN 270 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHH
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHH
Confidence 44799999999999999888 444334679999999998876554
No 360
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=87.18 E-value=1 Score=42.12 Aligned_cols=89 Identities=18% Similarity=0.129 Sum_probs=62.1
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
.+||=+|+ |.|..+..+++. ....+++++.++..++.+++.|....+. ..... .....+|+|+.+
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~---~~~~~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKM--KGAHTIAVASTDEKLKIAKEYGAEYLIN---ASKEDILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSEEEE---TTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCcEEEe---CCCchHHHHHHHHhCCCCceEEEEC
Confidence 78999994 467777777765 2346888999999999998887654332 11111 123469999876
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-.. ..+....+.|+|||.+++...
T Consensus 225 ~g~--------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 225 VGK--------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp CGG--------GGHHHHHHHEEEEEEEEECCC
T ss_pred CCh--------HHHHHHHHHhccCCEEEEEcC
Confidence 331 256778889999999998754
No 361
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=87.10 E-value=1.2 Score=41.62 Aligned_cols=71 Identities=15% Similarity=0.015 Sum_probs=52.1
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC---C-CCCccEEEec
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY---P-SLSFDMVHCA 287 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~---~-~~sFDlV~~~ 287 (372)
..+++|+=||.|.++..+...|+....+.++|+++..++.-+.+.....+...|...+.. + .+.+|+++..
T Consensus 16 ~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 358999999999999999888876555789999999988766664444444556655531 1 1369999975
No 362
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=86.92 E-value=1.3 Score=41.24 Aligned_cols=92 Identities=15% Similarity=0.075 Sum_probs=63.6
Q ss_pred eEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC-CCCCCCCccEEEeccccccccc
Q 017377 219 SVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-LPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 219 ~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~-lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
+||=+|+ |.|.++..+++.. ...+++++.++...+.+++.|....+..-+... .....+.+|+|+-.-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g------ 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG------ 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC------
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC------
Confidence 4998887 5688888888762 246888999999999999888765443211111 1123457998875421
Q ss_pred cHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 296 KEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. ..+.+..+.|+|+|.+++....
T Consensus 221 ~--~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 221 D--KVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp H--HHHHHHHHTEEEEEEEEECCCT
T ss_pred c--HHHHHHHHHHhcCCEEEEEecC
Confidence 1 2788899999999999987643
No 363
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=86.71 E-value=1.1 Score=42.34 Aligned_cols=124 Identities=15% Similarity=0.067 Sum_probs=71.1
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC-CCCCccEEEeccccccc---
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY-PSLSFDMVHCAQCGIIW--- 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~-~~~sFDlV~~~~~~~~~--- 293 (372)
.+++|+.||.|.++..+...|+ ..+.++|+++..++..+.+..... ..|...+.. .-..+|+|+...--..+
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG~--~~v~~~e~d~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~fS~a 87 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCGA--ECVYSNEWDKYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQAFSIS 87 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTTC--EEEEEECCCHHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTTTCTT
T ss_pred CcEEEECCCcCHHHHHHHHCCC--eEEEEEeCCHHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCCcchh
Confidence 5899999999999999988885 347889999999988776632222 345444421 11248999975111111
Q ss_pred -----cccHH-HHH---HHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEE
Q 017377 294 -----DKKEG-IFL---IEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLI 351 (372)
Q Consensus 294 -----~~~~~-~~L---~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~ 351 (372)
.+++. .++ .++.+.++|--.++=.++..-. ......++.+....+++++.+.
T Consensus 88 g~~~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~------~~~~~~~~~i~~~l~~~GY~v~ 148 (327)
T 2c7p_A 88 GKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFAS------HDNGNTLEVVKNTMNELDYSFH 148 (327)
T ss_dssp SCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGGT------GGGGHHHHHHHHHHHHTTBCCE
T ss_pred cccCCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHHh------ccccHHHHHHHHHHHhCCCEEE
Confidence 12222 233 3344556886443333343221 0223455656555567775443
No 364
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=86.44 E-value=1.7 Score=40.88 Aligned_cols=54 Identities=17% Similarity=0.084 Sum_probs=42.2
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER 260 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r 260 (372)
.+.+.+.+... .++ ..|||.-||+|+.+......+ ..++|+|+++..++.+++|
T Consensus 240 ~l~~~~i~~~~-~~~--------~~VlDpF~GsGtt~~aa~~~g---r~~ig~e~~~~~~~~~~~r 293 (323)
T 1boo_A 240 KLPEFFIRMLT-EPD--------DLVVDIFGGSNTTGLVAERES---RKWISFEMKPEYVAASAFR 293 (323)
T ss_dssp HHHHHHHHHHC-CTT--------CEEEETTCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHGG
T ss_pred HHHHHHHHHhC-CCC--------CEEEECCCCCCHHHHHHHHcC---CCEEEEeCCHHHHHHHHHH
Confidence 45555555543 333 689999999999998887776 4588999999999999887
No 365
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=86.31 E-value=1 Score=42.62 Aligned_cols=90 Identities=18% Similarity=0.124 Sum_probs=59.8
Q ss_pred CeEEEeCCC-CcHHH-HHHH-hcCCceeE-EEEeeCCHH---HHHHHHHcCCCeEEEEeeccCCCCC-----CCCccEEE
Q 017377 218 QSVLDVGCG-FGSFG-AHLV-SLKLMAVC-VAVYEATGS---QVQLALERGLPAMIGNFISRQLPYP-----SLSFDMVH 285 (372)
Q Consensus 218 ~~VLDIGCG-~G~~~-~~L~-~~~~~~~~-v~gvD~s~~---~v~~A~~rgl~~~~~~~d~~~lp~~-----~~sFDlV~ 285 (372)
.+||=+|+| .|.++ ..++ +. .... |+++|.++. ..+.+++.|.... +.. .-.+. .+.||+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~--~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~--~~~~~~i~~~~gg~Dvvi 247 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD--KGYENLYCLGRRDRPDPTIDIIEELDATYV--DSR--QTPVEDVPDVYEQMDFIY 247 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT--TCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETT--TSCGGGHHHHSCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHH--cCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCC--ccCHHHHHHhCCCCCEEE
Confidence 689999985 36677 7777 54 2233 788898887 8888888776433 221 11111 13689998
Q ss_pred eccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 286 CAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 286 ~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
-.-. . ...+.+..++|+|||.+++....
T Consensus 248 d~~g------~-~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 248 EATG------F-PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp ECSC------C-HHHHHHHHHHEEEEEEEEECCCC
T ss_pred ECCC------C-hHHHHHHHHHHhcCCEEEEEeCC
Confidence 6522 1 12677889999999999987654
No 366
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=85.98 E-value=1.1 Score=42.32 Aligned_cols=90 Identities=21% Similarity=0.151 Sum_probs=61.2
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
.+||-+|+|. |.++..+++.. .. .|+++|.++...+.+++.|....+ +..... .....+|+|+-.
T Consensus 169 ~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~---~~~~~~~~~~v~~~~~g~g~D~vid~ 243 (348)
T 2d8a_A 169 KSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKKVGADYVI---NPFEEDVVKEVMDITDGNGVDVFLEF 243 (348)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHHHTCSEEE---CTTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHhCCCEEE---CCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 6899999863 66777777652 23 578899999999999888865432 211111 122369999875
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-. . ...+.+..+.|++||.++....
T Consensus 244 ~g------~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 244 SG------A-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp SC------C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CC------C-HHHHHHHHHHHhcCCEEEEEcc
Confidence 32 1 1367788899999999998654
No 367
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=85.87 E-value=2.4 Score=40.84 Aligned_cols=93 Identities=15% Similarity=0.121 Sum_probs=59.7
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
.+||=+|+|. |.++..+++.. .. .|+++|.++.-.+.+++.|....+. ..... .....+|+|+-.
T Consensus 215 ~~VlV~GaG~vG~~aiqlak~~--Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~---~~~~~~~~~i~~~t~g~g~D~vid~ 289 (404)
T 3ip1_A 215 DNVVILGGGPIGLAAVAILKHA--GASKVILSEPSEVRRNLAKELGADHVID---PTKENFVEAVLDYTNGLGAKLFLEA 289 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHTCSEEEC---TTTSCHHHHHHHHTTTCCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHcCCCEEEc---CCCCCHHHHHHHHhCCCCCCEEEEC
Confidence 6888899864 66777777652 23 6888999999999999988664432 11111 123469999865
Q ss_pred cccccccccHHHHHHHHH----hcccCCeEEEEEeCCC
Q 017377 288 QCGIIWDKKEGIFLIEAD----RLLKPGGYFVLTSPES 321 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~----rvLkPGG~lvis~p~~ 321 (372)
-. .....+..+. +.+++||.+++.....
T Consensus 290 ~g------~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~ 321 (404)
T 3ip1_A 290 TG------VPQLVWPQIEEVIWRARGINATVAIVARAD 321 (404)
T ss_dssp SS------CHHHHHHHHHHHHHHCSCCCCEEEECSCCC
T ss_pred CC------CcHHHHHHHHHHHHhccCCCcEEEEeCCCC
Confidence 22 1111333344 4559999999876543
No 368
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=85.80 E-value=1.4 Score=42.22 Aligned_cols=94 Identities=22% Similarity=0.307 Sum_probs=62.8
Q ss_pred CeEEEeCCC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEee---ccC----C-C-CCCCCccEEEec
Q 017377 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI---SRQ----L-P-YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d---~~~----l-p-~~~~sFDlV~~~ 287 (372)
.+||-+|+| .|.++..+++... ...|+++|.++...+.+++.|....+. .. ..+ + . .....+|+|+-.
T Consensus 197 ~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~~~~v~~~~~g~g~Dvvid~ 274 (380)
T 1vj0_A 197 KTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEEIGADLTLN-RRETSVEERRKAIMDITHGRGADFILEA 274 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHHcCCcEEEe-ccccCcchHHHHHHHHhCCCCCcEEEEC
Confidence 789999976 4677777776521 136888999999999999888754332 11 000 0 0 122369999865
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
-.. . ..+.+..+.|+|||.+++....
T Consensus 275 ~g~----~---~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 275 TGD----S---RALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp SSC----T---THHHHHHHHEEEEEEEEECCCC
T ss_pred CCC----H---HHHHHHHHHHhcCCEEEEEecC
Confidence 321 1 2577888999999999987643
No 369
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=85.56 E-value=6.8 Score=36.58 Aligned_cols=102 Identities=11% Similarity=0.023 Sum_probs=62.0
Q ss_pred CCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc----C--CC--eEEEEeeccCCC---------CCC
Q 017377 216 GVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER----G--LP--AMIGNFISRQLP---------YPS 278 (372)
Q Consensus 216 ~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r----g--l~--~~~~~~d~~~lp---------~~~ 278 (372)
+++.|+++|||.=+....+.. .....+.-+| .+..++..++. + .. ..+...|..+ . |..
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~--~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~ 177 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDW--PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDP 177 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCC--CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCT
T ss_pred CCCeEEEeCCCCCchhhhccC--CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCC
Confidence 346799999999887666542 2235577788 57776544432 1 12 3344445443 2 222
Q ss_pred CCccEEEecccccccccc-HHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 279 LSFDMVHCAQCGIIWDKK-EGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 279 ~sFDlV~~~~~~~~~~~~-~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
..--++++..+++++.++ ...++..+...+.||+++++...+.
T Consensus 178 ~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~ 221 (310)
T 2uyo_A 178 SARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPL 221 (310)
T ss_dssp TSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCT
T ss_pred CCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCC
Confidence 233455566555555433 3468888888889999999987654
No 370
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=85.37 E-value=1 Score=41.46 Aligned_cols=90 Identities=18% Similarity=0.178 Sum_probs=59.5
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeec-cCCCCCCCCccEEEecccccccc
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-RQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~-~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.+||-+|+ |.|..+..+++.. ...++++|.++...+.+++.|....+. ... .++.-.-+.+|+|+. -..
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~~~~-~~~~~~~~~~~~~~d~vid-~g~---- 198 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLALGAEEAAT-YAEVPERAKAWGGLDLVLE-VRG---- 198 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHTTCSEEEE-GGGHHHHHHHTTSEEEEEE-CSC----
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCEEEE-CCcchhHHHHhcCceEEEE-CCH----
Confidence 78999997 4677777777652 246888999988888888877654332 111 110000056999987 431
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 295 KKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 295 ~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
..+....+.|++||.++....
T Consensus 199 ----~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 199 ----KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp ----TTHHHHHTTEEEEEEEEEC--
T ss_pred ----HHHHHHHHhhccCCEEEEEeC
Confidence 156788899999999987654
No 371
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.32 E-value=1 Score=42.50 Aligned_cols=90 Identities=17% Similarity=0.170 Sum_probs=61.0
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC------CCCCCccEEEeccc
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp------~~~~sFDlV~~~~~ 289 (372)
.+||=+|+ |.|..+..+++.. ...+++++.++...+.+++.|....+. .+ ..+. .....+|+|+-+-.
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~ga~~v~~-~~-~~~~~~v~~~~~~~g~Dvvid~~g 236 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKSVGADIVLP-LE-EGWAKAVREATGGAGVDMVVDPIG 236 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEE-SS-TTHHHHHHHHTTTSCEEEEEESCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCcEEec-Cc-hhHHHHHHHHhCCCCceEEEECCc
Confidence 78999997 4677887777762 246888899998889998887664432 11 1110 12346999987533
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. ..+....+.|++||.+++...
T Consensus 237 ~--------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 237 G--------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp ----------CHHHHHHTEEEEEEEEEC--
T ss_pred h--------hHHHHHHHhhcCCCEEEEEEc
Confidence 1 146778899999999998653
No 372
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=85.17 E-value=2.9 Score=39.73 Aligned_cols=90 Identities=18% Similarity=0.204 Sum_probs=63.0
Q ss_pred CeEEEeC-CC-CcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEee-----ccCCCCCCCCccEEEeccc
Q 017377 218 QSVLDVG-CG-FGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFI-----SRQLPYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIG-CG-~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d-----~~~lp~~~~sFDlV~~~~~ 289 (372)
.+||=+| +| .|.++..+++. + ...|+++|.++...+.+++.|....+..-+ ... ...+.+|+|+-.-.
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~~~~~~~~~~~lGad~vi~~~~~~~~~v~~--~~~~g~Dvvid~~g 248 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRT--DLTVIATASRPETQEWVKSLGAHHVIDHSKPLAAEVAA--LGLGAPAFVFSTTH 248 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECSSHHHHHHHHHTTCSEEECTTSCHHHHHHT--TCSCCEEEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHcCCCEEEeCCCCHHHHHHH--hcCCCceEEEECCC
Confidence 6899888 44 58888888875 3 246888999999999999888664432100 011 23457999886422
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
....+.+..+.|+|||.+++..
T Consensus 249 -------~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 249 -------TDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp -------HHHHHHHHHHHSCTTCEEEECS
T ss_pred -------chhhHHHHHHHhcCCCEEEEEC
Confidence 1236788899999999999874
No 373
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=84.42 E-value=2.6 Score=43.54 Aligned_cols=100 Identities=20% Similarity=0.135 Sum_probs=57.9
Q ss_pred CeEEEeCCCCcHHHHHHHhc-----------CCceeEEEEeeC---CHHHHHHHHHc-----------------CCC---
Q 017377 218 QSVLDVGCGFGSFGAHLVSL-----------KLMAVCVAVYEA---TGSQVQLALER-----------------GLP--- 263 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~-----------~~~~~~v~gvD~---s~~~v~~A~~r-----------------gl~--- 263 (372)
-+|||+|-|+|......... ......++.+|. +.+.++.+... .++
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 48999999999866555432 123467888998 77777644432 000
Q ss_pred ----------eEEEEeecc----CCCCC-CCCccEEEecccccccccc--HHHHHHHHHhcccCCeEEEEE
Q 017377 264 ----------AMIGNFISR----QLPYP-SLSFDMVHCAQCGIIWDKK--EGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 264 ----------~~~~~~d~~----~lp~~-~~sFDlV~~~~~~~~~~~~--~~~~L~el~rvLkPGG~lvis 317 (372)
..+...|+. +++.. ...||+|+.-...-.-.++ ...++..+.++++|||.+.-.
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 218 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 218 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEES
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 011111211 11111 4679999875311111111 135899999999999987643
No 374
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=84.14 E-value=1.8 Score=40.44 Aligned_cols=89 Identities=17% Similarity=0.042 Sum_probs=61.4
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
.+||-+|+ |.|..+..++... ...++++|.++..++.+++.|....+ +..... .....+|+|+.+
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~i~~~~~~~~~d~vi~~ 221 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARKLGCHHTI---NYSTQDFAEVVREITGGKGVDVVYDS 221 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred CEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCCEEE---ECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence 78999995 6788777777652 24688899999888888877755332 221111 112469999876
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-.. ..+....+.|++||.+++...
T Consensus 222 ~g~--------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 222 IGK--------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp SCT--------TTHHHHHHTEEEEEEEEECCC
T ss_pred CcH--------HHHHHHHHhhccCCEEEEEec
Confidence 431 256788899999999988754
No 375
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=84.09 E-value=1.6 Score=41.22 Aligned_cols=91 Identities=18% Similarity=0.195 Sum_probs=60.3
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC------CCCCCCccEEEeccc
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL------PYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l------p~~~~sFDlV~~~~~ 289 (372)
.+||-+|+ |.|..+..++... ...++++|.++..++.+++.|....+ +.+..+. -...+.+|+|+.+-.
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~d~vi~~~G 240 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEKLGAAAGF-NYKKEDFSEATLKFTKGAGVNLILDCIG 240 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTCSEEE-ETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred CEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCcEEE-ecCChHHHHHHHHHhcCCCceEEEECCC
Confidence 78999984 5677777776652 24688899999999988877765332 2111110 012346999987643
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. + .+.+..++|++||.+++...
T Consensus 241 ~----~----~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 241 G----S----YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp G----G----GHHHHHHHEEEEEEEEECCC
T ss_pred c----h----HHHHHHHhccCCCEEEEEec
Confidence 1 1 45677889999999998764
No 376
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=84.07 E-value=3.9 Score=38.21 Aligned_cols=95 Identities=16% Similarity=0.071 Sum_probs=60.7
Q ss_pred CeEEEeCCCCc-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC------CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFG-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp------~~~~sFDlV~~~~~~ 290 (372)
.+||=+|+|.+ .++..+++.- ....|+++|.+++-.+.+++.|....+..-+ .+.. .....+|.++....
T Consensus 165 ~~VlV~GaG~~g~~a~~~a~~~-~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~-~~~~~~v~~~t~g~g~d~~~~~~~- 241 (348)
T 4eez_A 165 DWQVIFGAGGLGNLAIQYAKNV-FGAKVIAVDINQDKLNLAKKIGADVTINSGD-VNPVDEIKKITGGLGVQSAIVCAV- 241 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-SCCEEEEEESCHHHHHHHHHTTCSEEEEC-C-CCHHHHHHHHTTSSCEEEEEECCS-
T ss_pred CEEEEEcCCCccHHHHHHHHHh-CCCEEEEEECcHHHhhhhhhcCCeEEEeCCC-CCHHHHhhhhcCCCCceEEEEecc-
Confidence 78888999864 4555555431 2356889999999999999988775543211 1100 12234666654311
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
....+....+.|++||.+++.....
T Consensus 242 ------~~~~~~~~~~~l~~~G~~v~~g~~~ 266 (348)
T 4eez_A 242 ------ARIAFEQAVASLKPMGKMVAVAVPN 266 (348)
T ss_dssp ------CHHHHHHHHHTEEEEEEEEECCCCS
T ss_pred ------CcchhheeheeecCCceEEEEeccC
Confidence 1236788889999999999876543
No 377
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=83.88 E-value=1.4 Score=40.98 Aligned_cols=91 Identities=14% Similarity=0.171 Sum_probs=59.4
Q ss_pred eEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeec--cC-CCCCCCCccEEEeccccccc
Q 017377 219 SVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS--RQ-LPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 219 ~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~--~~-lp~~~~sFDlV~~~~~~~~~ 293 (372)
+||=+|+ |.|.++..+++.. ...+++++.++...+.+++.|....+..-+. .. .....+.+|+|+-+-..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~--- 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG--- 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT---
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH---
Confidence 7999997 5678888887752 2347788888888888888776543321111 00 11223469999865321
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
..+.+..+.|++||.+++...
T Consensus 227 -----~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 227 -----RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp -----TTHHHHHHTEEEEEEEEECSC
T ss_pred -----HHHHHHHHhhccCCEEEEEee
Confidence 146678889999999998654
No 378
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=82.93 E-value=1.2 Score=41.52 Aligned_cols=90 Identities=13% Similarity=0.085 Sum_probs=60.2
Q ss_pred eEEEeCC--CCcHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeec--cC-CCCCCCCccEEEecccccc
Q 017377 219 SVLDVGC--GFGSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS--RQ-LPYPSLSFDMVHCAQCGII 292 (372)
Q Consensus 219 ~VLDIGC--G~G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~--~~-lp~~~~sFDlV~~~~~~~~ 292 (372)
+||=+|+ |.|.++..+++. | ..+++++.++...+.+++.|....+..-+. .. .....+.+|+|+-.-.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g--- 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG---YDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG--- 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT---CCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC---
T ss_pred eEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc---
Confidence 7999997 567777777765 4 347778888877888888786544321111 11 1122356999886532
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. ..+.+..+.|++||.+++...
T Consensus 227 --~---~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 227 --G---KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp --T---HHHHHHHTTEEEEEEEEECCC
T ss_pred --H---HHHHHHHHhhcCCCEEEEEec
Confidence 1 257788899999999998654
No 379
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=82.55 E-value=1.1 Score=42.62 Aligned_cols=93 Identities=20% Similarity=0.127 Sum_probs=57.6
Q ss_pred CeEEEeCCC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHH-HcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLAL-ERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~-~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+||=+|+| .|.++..+++. ....++++|.++...+.++ +.|....+..-+...+.-..+.+|+|+-.-....
T Consensus 182 ~~VlV~GaG~vG~~a~qlak~--~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~g~D~vid~~g~~~--- 256 (357)
T 2cf5_A 182 LRGGILGLGGVGHMGVKIAKA--MGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHH--- 256 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--HTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHHHSTTTEEEEEECCCSCC---
T ss_pred CEEEEECCCHHHHHHHHHHHH--CCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHHHhcCCCCEEEECCCChH---
Confidence 688889976 36666677665 2246888999988888887 6665543321110000000136999986532111
Q ss_pred cHHHHHHHHHhcccCCeEEEEEeC
Q 017377 296 KEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.+....++|+|||.+++...
T Consensus 257 ----~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 257 ----ALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp ----CSHHHHTTEEEEEEEEECSC
T ss_pred ----HHHHHHHHhccCCEEEEeCC
Confidence 34566789999999998754
No 380
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=82.44 E-value=2.6 Score=39.99 Aligned_cols=88 Identities=19% Similarity=0.061 Sum_probs=58.0
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCH---HHHHHHHHcCCCeEEEEeeccCCCCC------CCCccEEEec
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATG---SQVQLALERGLPAMIGNFISRQLPYP------SLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~---~~v~~A~~rgl~~~~~~~d~~~lp~~------~~sFDlV~~~ 287 (372)
.+||-+|+|. |.++..+++. ....|+++|.++ ...+.+++.|.... + . . .+. .+.+|+|+.+
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~--~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~--~-~~~~~~~~~~~~~d~vid~ 253 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRT--YGLEVWMANRREPTEVEQTVIEETKTNYY--N-S--S-NGYDKLKDSVGKFDVIIDA 253 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHH--HTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-C--T-TCSHHHHHHHCCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCccchHHHHHHHHhCCcee--c-h--H-HHHHHHHHhCCCCCEEEEC
Confidence 7899999842 5555555554 223678889887 77788887775433 2 2 2 221 1469999876
Q ss_pred cccccccccHHHHH-HHHHhcccCCeEEEEEeCC
Q 017377 288 QCGIIWDKKEGIFL-IEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 288 ~~~~~~~~~~~~~L-~el~rvLkPGG~lvis~p~ 320 (372)
-... ..+ ....+.|++||.+++....
T Consensus 254 ~g~~-------~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 254 TGAD-------VNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp CCCC-------THHHHHHGGGEEEEEEEEECSCC
T ss_pred CCCh-------HHHHHHHHHHHhcCCEEEEEecC
Confidence 3311 145 7889999999999987653
No 381
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=82.20 E-value=2.6 Score=39.67 Aligned_cols=55 Identities=15% Similarity=0.042 Sum_probs=42.7
Q ss_pred HHHHHHHHHHccCCCchhhhcCCCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCH---HHHHHHHHcC
Q 017377 195 DYSRQIAEMIGLGTDSEFLQAGVQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATG---SQVQLALERG 261 (372)
Q Consensus 195 ~~~~~l~~~l~~~~~~~~~~~~~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~---~~v~~A~~rg 261 (372)
.+.+.+.+... .++ ..|||.-||+|+.+......+ ..++|+|+++ ..++.+++|-
T Consensus 230 ~l~~~~i~~~~-~~~--------~~vlDpF~GsGtt~~aa~~~~---r~~ig~e~~~~~~~~~~~~~~Rl 287 (319)
T 1eg2_A 230 AVIERLVRALS-HPG--------STVLDFFAGSGVTARVAIQEG---RNSICTDAAPVFKEYYQKQLTFL 287 (319)
T ss_dssp HHHHHHHHHHS-CTT--------CEEEETTCTTCHHHHHHHHHT---CEEEEEESSTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhC-CCC--------CEEEecCCCCCHHHHHHHHcC---CcEEEEECCccHHHHHHHHHHHH
Confidence 45555555543 233 689999999999998888776 4578999999 9999998874
No 382
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=82.05 E-value=2.6 Score=39.65 Aligned_cols=89 Identities=16% Similarity=0.294 Sum_probs=60.4
Q ss_pred CeEEEeC-CC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC-C-----CCCCCCccEEEeccc
Q 017377 218 QSVLDVG-CG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-L-----PYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIG-CG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~-l-----p~~~~sFDlV~~~~~ 289 (372)
.+||=+| +| .|.++..+++. ....+++++.++..++.+++.|....+. ... + ....+.||+|+-.-.
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~---~~~~~~~~~~~~~~~g~Dvv~d~~g 226 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKA--YGLRVITTASRNETIEWTKKMGADIVLN---HKESLLNQFKTQGIELVDYVFCTFN 226 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH--TTCEEEEECCSHHHHHHHHHHTCSEEEC---TTSCHHHHHHHHTCCCEEEEEESSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCcEEEE---CCccHHHHHHHhCCCCccEEEECCC
Confidence 6899884 44 47777777765 2346888999999999999888654332 111 0 012346999986422
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
....+....+.|+|||.++...
T Consensus 227 -------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 227 -------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp -------HHHHHHHHHHHEEEEEEEEESS
T ss_pred -------chHHHHHHHHHhccCCEEEEEC
Confidence 1236788889999999997653
No 383
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=81.78 E-value=2.3 Score=44.18 Aligned_cols=100 Identities=17% Similarity=0.115 Sum_probs=57.2
Q ss_pred CCeEEEeCCCCcHHHHHHHhc-----------CCceeEEEEeeC---CHHHHHHHHHc--------------------C-
Q 017377 217 VQSVLDVGCGFGSFGAHLVSL-----------KLMAVCVAVYEA---TGSQVQLALER--------------------G- 261 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~-----------~~~~~~v~gvD~---s~~~v~~A~~r--------------------g- 261 (372)
.-+|+|+|.|+|.....+.+. ......++.+|. +.+.+..|... |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 358999999999876665542 112367888888 55555543321 0
Q ss_pred ---------CCeEEEEeeccC-CC-CC---CCCccEEEecccccccccc--HHHHHHHHHhcccCCeEEEE
Q 017377 262 ---------LPAMIGNFISRQ-LP-YP---SLSFDMVHCAQCGIIWDKK--EGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 262 ---------l~~~~~~~d~~~-lp-~~---~~sFDlV~~~~~~~~~~~~--~~~~L~el~rvLkPGG~lvi 316 (372)
+...+..+|+.+ ++ ++ +..||+++.-...-.-.++ ...++..+.++++|||.+.-
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 011122223211 22 11 4679999885321111111 13589999999999998663
No 384
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=81.62 E-value=1.7 Score=41.09 Aligned_cols=89 Identities=16% Similarity=0.149 Sum_probs=61.3
Q ss_pred CeEEEeC--CCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC-------CCCCccEEEecc
Q 017377 218 QSVLDVG--CGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY-------PSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIG--CG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~-------~~~sFDlV~~~~ 288 (372)
.+||=+| .|.|..+..+++.. ...++++|.++...+.+++.|....+. .....+ ..+.+|+|+.+-
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~~~~---~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACERLGAKRGIN---YRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEEEE---TTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhcCCCEEEe---CCchHHHHHHHHHhCCCceEEEECC
Confidence 7899995 34577777777652 346888999999999999888664432 111111 134699998763
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.. ..+....+.|++||.+++...
T Consensus 244 g~--------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 244 GA--------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp CG--------GGHHHHHHTEEEEEEEEECCC
T ss_pred CH--------HHHHHHHHHhccCCEEEEEEe
Confidence 31 156677889999999998754
No 385
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=80.72 E-value=20 Score=33.11 Aligned_cols=126 Identities=8% Similarity=0.010 Sum_probs=72.3
Q ss_pred eEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCC-CCCccEEEeccccccc----
Q 017377 219 SVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYP-SLSFDMVHCAQCGIIW---- 293 (372)
Q Consensus 219 ~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~-~~sFDlV~~~~~~~~~---- 293 (372)
+|||+=||.|.+..-|...|+. .+.++|+++.+++.-+.+. +..+...|...+... -..+|+++...--..+
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~--~v~a~e~d~~a~~ty~~N~-~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS~ag 78 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFR--IICANEYDKSIWKTYESNH-SAKLIKGDISKISSDEFPKCDGIIGGPPSQSWSEGG 78 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCE--EEEEEECCTTTHHHHHHHC-CSEEEESCGGGCCGGGSCCCSEEECCCCGGGTEETT
T ss_pred eEEEeCcCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHHC-CCCcccCChhhCCHhhCCcccEEEecCCCCCcCCCC
Confidence 6999999999999998888864 3678999999887766554 334444566555321 1358999874110111
Q ss_pred ----cccH-HHHHH---HHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcCeeEEee
Q 017377 294 ----DKKE-GIFLI---EADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKICWSLIAQ 353 (372)
Q Consensus 294 ----~~~~-~~~L~---el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lcw~~~~~ 353 (372)
..|+ ..++. ++.+.++|--.++=.++..-.. .....+..+..-.+++++.+...
T Consensus 79 ~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl~~~------~~~~~~~~i~~~l~~~GY~v~~~ 140 (331)
T 3ubt_Y 79 SLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQ------RHNKAVQEFIQEFDNAGYDVHII 140 (331)
T ss_dssp EECCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGGGGC------TTSHHHHHHHHHHHHHTEEEEEE
T ss_pred CccCCCCchhHHHHHHHHHHhccCCeEEEeeeecccccc------cccchhhhhhhhhccCCcEEEEE
Confidence 1222 23444 4455578863333223322111 22244555555557777665443
No 386
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=80.63 E-value=1.5 Score=41.77 Aligned_cols=93 Identities=19% Similarity=0.165 Sum_probs=56.5
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHH-HcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLAL-ERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~-~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+||=+|+|. |.++..+++.. ...+++++.++...+.++ +.|....+..-+...+.-..+.+|+|+..-....
T Consensus 189 ~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~D~vid~~g~~~--- 263 (366)
T 1yqd_A 189 KHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIIDTVSAVH--- 263 (366)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTCEEEEEECCSSCC---
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCCCCEEEECCCcHH---
Confidence 6888899763 66666666652 246888899988888877 5565433211110000000136999987533111
Q ss_pred cHHHHHHHHHhcccCCeEEEEEeC
Q 017377 296 KEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.+....+.|++||.++....
T Consensus 264 ----~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 264 ----PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp ----CSHHHHHHEEEEEEEEECCC
T ss_pred ----HHHHHHHHHhcCCEEEEEcc
Confidence 24456788999999988654
No 387
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=80.05 E-value=3.2 Score=39.09 Aligned_cols=89 Identities=13% Similarity=0.092 Sum_probs=59.4
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHH-cCCCeEEEEeeccCCC-------CCCCCccEEEe
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAV-CVAVYEATGSQVQLALE-RGLPAMIGNFISRQLP-------YPSLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~-rgl~~~~~~~d~~~lp-------~~~~sFDlV~~ 286 (372)
.+||=+|+ |.|..+..++.. ... .++++|.++...+.+++ .|....+ +..... ...+.+|+|+.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~--~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~~~~~~~~~~d~vi~ 236 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHF--LGCSRVVGICGTHEKCILLTSELGFDAAI---NYKKDNVAEQLRESCPAGVDVYFD 236 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHTSCCSEEE---ETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHH--CCCCeEEEEeCCHHHHHHHHHHcCCceEE---ecCchHHHHHHHHhcCCCCCEEEE
Confidence 68999997 456666666664 224 67888999988888876 5654322 221111 01126999987
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 287 ~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
+-. ...+....++|++||.+++...
T Consensus 237 ~~G--------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 237 NVG--------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp SCC--------HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCC--------HHHHHHHHHHhccCcEEEEECC
Confidence 643 1367888999999999998654
No 388
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=79.88 E-value=7.1 Score=38.19 Aligned_cols=90 Identities=16% Similarity=0.200 Sum_probs=62.5
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC-------------------
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY------------------- 276 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~------------------- 276 (372)
.+||=+|+ |.|.++..+++.. ...+++++.++.-++.+++.|....+. .....+
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~lGa~~vi~---~~~~d~~~~~~~~~~~~~~~~~~~~ 304 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRAMGAEAIID---RNAEGYRFWKDENTQDPKEWKRFGK 304 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCCEEEE---TTTTTCCSEEETTEECHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHhhCCcEEEe---cCcCcccccccccccchHHHHHHHH
Confidence 78999997 4677888887762 345677788999999999888765432 111111
Q ss_pred ------CCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 277 ------PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 277 ------~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
....+|+|+-.-. . ..+....++|++||.+++....
T Consensus 305 ~i~~~t~g~g~Dvvid~~G-----~---~~~~~~~~~l~~~G~iv~~G~~ 346 (456)
T 3krt_A 305 RIRELTGGEDIDIVFEHPG-----R---ETFGASVFVTRKGGTITTCAST 346 (456)
T ss_dssp HHHHHHTSCCEEEEEECSC-----H---HHHHHHHHHEEEEEEEEESCCT
T ss_pred HHHHHhCCCCCcEEEEcCC-----c---hhHHHHHHHhhCCcEEEEEecC
Confidence 1247999986522 1 3677888999999999986543
No 389
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=79.73 E-value=1.8 Score=35.10 Aligned_cols=93 Identities=22% Similarity=0.212 Sum_probs=55.0
Q ss_pred CeEEEeCCCC-cHH-HHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC----CCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGF-GSF-GAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP----YPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~-G~~-~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp----~~~~sFDlV~~~~~~~ 291 (372)
.+|+=+|||. |.. +..|.+.+ ..++++|.++..++.+++.+..+..++. .+.. ..-..+|+|++...
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g---~~v~vid~~~~~~~~~~~~g~~~i~gd~--~~~~~l~~a~i~~ad~vi~~~~-- 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD---IPLVVIETSRTRVDELRERGVRAVLGNA--ANEEIMQLAHLECAKWLILTIP-- 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHTTCEEEESCT--TSHHHHHHTTGGGCSEEEECCS--
T ss_pred CCEEEECcCHHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHHcCCCEEECCC--CCHHHHHhcCcccCCEEEEECC--
Confidence 4688888864 332 23333334 4588899999999998887776555432 2211 12246898886521
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
- +.....+....+.+.|+..++....
T Consensus 81 -~-~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 81 -N-GYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp -C-HHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred -C-hHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 1 1112234456677788887766544
No 390
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=79.35 E-value=2.3 Score=39.94 Aligned_cols=88 Identities=23% Similarity=0.179 Sum_probs=59.5
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC------CCCCCccEEEeccc
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP------YPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp------~~~~sFDlV~~~~~ 289 (372)
.+||=+|+ |.|.++..+++.. ...++++ .++..++.+++.|... .+ +..++. .....+|+|+-+-.
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~lGa~~--i~-~~~~~~~~~~~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRDLGATP--ID-ASREPEDYAAEHTAGQGFDLVYDTLG 225 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHHHTSEE--EE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHHcCCCE--ec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence 78999994 4577887877752 2357777 7888899998888654 22 111110 12346999986532
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. ..+....+.|++||.+++...
T Consensus 226 -----~---~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 226 -----G---PVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp -----T---HHHHHHHHHEEEEEEEEESCC
T ss_pred -----c---HHHHHHHHHHhcCCeEEEEcc
Confidence 1 267788889999999998654
No 391
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=77.96 E-value=11 Score=36.23 Aligned_cols=90 Identities=22% Similarity=0.261 Sum_probs=61.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccc---
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD--- 294 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~--- 294 (372)
.+||.++-+.|.++..+... ..++.+.-|....+....+|++.... . ....+...||+|+.- ++
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~--~--~~~~~~~~~d~v~~~-----~Pk~k 113 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGR----MAVERLETSRAAFRCLTASGLQARLA--L--PWEAAAGAYDLVVLA-----LPAGR 113 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTT----BEEEEEECBHHHHHHHHHTTCCCEEC--C--GGGSCTTCEEEEEEE-----CCGGG
T ss_pred CcEEEecCCCCccccccCCC----CceEEEeCcHHHHHHHHHcCCCcccc--C--CccCCcCCCCEEEEE-----CCcch
Confidence 57999999999776666422 33455566776666666778876431 1 122245779998853 22
Q ss_pred --ccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 295 --KKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 295 --~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
......|.++.+.|+|||.+++...+
T Consensus 114 ~~~~~~~~l~~~~~~l~~g~~i~~~g~~ 141 (381)
T 3dmg_A 114 GTAYVQASLVAAARALRMGGRLYLAGDK 141 (381)
T ss_dssp CHHHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 12346788999999999999999764
No 392
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=76.92 E-value=3.2 Score=38.44 Aligned_cols=100 Identities=10% Similarity=0.008 Sum_probs=66.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcC---CCeEEEEeeccC-C---CCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERG---LPAMIGNFISRQ-L---PYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rg---l~~~~~~~d~~~-l---p~~~~sFDlV~~~~~~ 290 (372)
..+||+=+|+|.++..+++.+ -.++.+|.++..++..+++- -.+.+...|... + .-+...||+|++---
T Consensus 93 ~~~LDlfaGSGaLgiEaLS~~---d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP- 168 (283)
T 2oo3_A 93 NSTLSYYPGSPYFAINQLRSQ---DRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS- 168 (283)
T ss_dssp SSSCCEEECHHHHHHHHSCTT---SEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCC-
T ss_pred CCceeEeCCcHHHHHHHcCCC---CeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCC-
Confidence 458999999999999998853 45677999999998877652 234555445322 1 123457999998633
Q ss_pred ccccccHHHHHHHHHh--cccCCeEEEEEeCCC
Q 017377 291 IIWDKKEGIFLIEADR--LLKPGGYFVLTSPES 321 (372)
Q Consensus 291 ~~~~~~~~~~L~el~r--vLkPGG~lvis~p~~ 321 (372)
+....+...++..+.. .+.|+|.+++--|..
T Consensus 169 Ye~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~ 201 (283)
T 2oo3_A 169 YERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVV 201 (283)
T ss_dssp CCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEES
T ss_pred CCCCcHHHHHHHHHHHhCccCCCeEEEEEEecc
Confidence 2222344455555544 567899999887754
No 393
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=76.79 E-value=11 Score=34.30 Aligned_cols=100 Identities=13% Similarity=0.153 Sum_probs=61.2
Q ss_pred CeEEEeCCCCcHHHHHHHhc------CCceeEEEEee-----CCH----------------------HHHHHHH---Hc-
Q 017377 218 QSVLDVGCGFGSFGAHLVSL------KLMAVCVAVYE-----ATG----------------------SQVQLAL---ER- 260 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~------~~~~~~v~gvD-----~s~----------------------~~v~~A~---~r- 260 (372)
..|+|+|+-.|..+..++.. ......+.+.| +.. ..++... ++
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 57999999999988776542 11235577777 221 1122211 11
Q ss_pred ---CC---CeEEEEeeccC-CC-----CCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 261 ---GL---PAMIGNFISRQ-LP-----YPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 261 ---gl---~~~~~~~d~~~-lp-----~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+. ++.+..++..+ +| .+..+||+|+.-.- ........+..+...|+|||++++.+.+
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D---~Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD---LYEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC---CHHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc---ccchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 22 24455444322 22 34567999998742 2233445889999999999999998864
No 394
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=76.69 E-value=7.9 Score=35.99 Aligned_cols=92 Identities=13% Similarity=0.101 Sum_probs=61.6
Q ss_pred CeEEEeCCCC-cHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------CCCCCccEEEec
Q 017377 218 QSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP--------YPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp--------~~~~sFDlV~~~ 287 (372)
.+||=+|+|. |.++..+++. +. ..++++|.++.-++.+++.|....+. ..+.. .....+|+|+..
T Consensus 162 ~~VlV~GaG~vG~~aiq~ak~~G~--~~vi~~~~~~~k~~~a~~lGa~~~i~---~~~~~~~~~~~~~~~~~g~d~v~d~ 236 (346)
T 4a2c_A 162 KNVIIIGAGTIGLLAIQCAVALGA--KSVTAIDISSEKLALAKSFGAMQTFN---SSEMSAPQMQSVLRELRFNQLILET 236 (346)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTTCSEEEE---TTTSCHHHHHHHHGGGCSSEEEEEC
T ss_pred CEEEEECCCCcchHHHHHHHHcCC--cEEEEEechHHHHHHHHHcCCeEEEe---CCCCCHHHHHHhhcccCCccccccc
Confidence 7899899874 5566666665 32 34677899999999999988765443 11111 122457887754
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
-. . ...+....++|++||.+++.....
T Consensus 237 ~G------~-~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 237 AG------V-PQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp SC------S-HHHHHHHHHHCCTTCEEEECCCCS
T ss_pred cc------c-cchhhhhhheecCCeEEEEEeccC
Confidence 22 1 236778889999999999876543
No 395
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=76.55 E-value=5.9 Score=36.66 Aligned_cols=88 Identities=19% Similarity=0.108 Sum_probs=56.7
Q ss_pred CeEEEeC-CC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC-C--CCCCccEEEecccccc
Q 017377 218 QSVLDVG-CG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-Y--PSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIG-CG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp-~--~~~sFDlV~~~~~~~~ 292 (372)
.+||=+| +| .|.++..+++.. ...+++++ ++...+.+++.|....+. ..... + .-..+|+|+-.-.
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~~lGa~~~i~---~~~~~~~~~~~~g~D~v~d~~g--- 224 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLKALGAEQCIN---YHEEDFLLAISTPVDAVIDLVG--- 224 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHHHHTCSEEEE---TTTSCHHHHCCSCEEEEEESSC---
T ss_pred CEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHHHcCCCEEEe---CCCcchhhhhccCCCEEEECCC---
Confidence 7899886 44 588888888762 23566666 455588888888765332 21111 1 1146999986522
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. ..+....+.|++||.++....
T Consensus 225 ---~--~~~~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 225 ---G--DVGIQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp ---H--HHHHHHGGGEEEEEEEEECCS
T ss_pred ---c--HHHHHHHHhccCCCEEEEeCC
Confidence 1 133778999999999998643
No 396
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=75.44 E-value=11 Score=36.51 Aligned_cols=92 Identities=15% Similarity=0.113 Sum_probs=61.9
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC--------------------
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-------------------- 275 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp-------------------- 275 (372)
.+||=+|+ |.|..+..+++. ....+++++.++..++.+++.|....+...+ ....
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~--~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 298 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKN--GGGIPVAVVSSAQKEAAVRALGCDLVINRAE-LGITDDIADDPRRVVETGRKLAKL 298 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCCCEEEHHH-HTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCCEEEeccc-ccccccccccccccchhhhHHHHH
Confidence 78999997 457777777765 2245677788999999998888765433111 1110
Q ss_pred ---CCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 276 ---YPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 276 ---~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
.....+|+|+-+-. . ..+....+.|++||.+++....
T Consensus 299 v~~~~g~g~Dvvid~~G-----~---~~~~~~~~~l~~~G~iv~~G~~ 338 (447)
T 4a0s_A 299 VVEKAGREPDIVFEHTG-----R---VTFGLSVIVARRGGTVVTCGSS 338 (447)
T ss_dssp HHHHHSSCCSEEEECSC-----H---HHHHHHHHHSCTTCEEEESCCT
T ss_pred HHHHhCCCceEEEECCC-----c---hHHHHHHHHHhcCCEEEEEecC
Confidence 00346999987533 1 2567788899999999987643
No 397
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=75.31 E-value=2 Score=40.40 Aligned_cols=89 Identities=16% Similarity=0.104 Sum_probs=57.5
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCcee-EEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC-------CCCCccEEEecc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAV-CVAVYEATGSQVQLALERGLPAMIGNFISRQLPY-------PSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~-~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~-------~~~sFDlV~~~~ 288 (372)
.+||-+|+|. |.++..+++.. .. .|+++|.++..++.+++. ... .. +.....+ ..+.+|+|+-.-
T Consensus 166 ~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a~~-v~--~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (343)
T 2dq4_A 166 KSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-ADR-LV--NPLEEDLLEVVRRVTGSGVEVLLEFS 239 (343)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-CSE-EE--CTTTSCHHHHHHHHHSSCEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-HHh-cc--CcCccCHHHHHHHhcCCCCCEEEECC
Confidence 7899999853 66777777652 23 578899999888877654 222 22 2211111 024699998653
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. . ...+.+..+.|++||.+++...
T Consensus 240 g------~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 240 G------N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp C------C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred C------C-HHHHHHHHHHHhcCCEEEEEec
Confidence 2 1 1267788999999999988654
No 398
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=74.15 E-value=2 Score=35.38 Aligned_cols=44 Identities=16% Similarity=0.131 Sum_probs=31.5
Q ss_pred CCCCCCCCccEEEeccccc-cccccHHHHHHHHHhcccCCeEEEE
Q 017377 273 QLPYPSLSFDMVHCAQCGI-IWDKKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 273 ~lp~~~~sFDlV~~~~~~~-~~~~~~~~~L~el~rvLkPGG~lvi 316 (372)
...+|+++||.|+...--. ....-+..++..+.+.|||||.|..
T Consensus 52 ~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 52 SITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 3457899999999742211 1112235699999999999999987
No 399
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.12 E-value=5.2 Score=33.56 Aligned_cols=95 Identities=15% Similarity=0.024 Sum_probs=54.4
Q ss_pred CeEEEeCCCC-cHH-HHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC-C-CC-CCCCccEEEeccccc
Q 017377 218 QSVLDVGCGF-GSF-GAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-L-PY-PSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~-G~~-~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~-l-p~-~~~sFDlV~~~~~~~ 291 (372)
.+|+=+|+|. |.. +..|.+. + ..|+++|.++..++.+.+.|..+..++..... + .. .-..+|+|+..-.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~-- 114 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYG---KISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMP-- 114 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHC---SCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCS--
T ss_pred CcEEEECCCHHHHHHHHHHHhccC---CeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCC--
Confidence 4688888763 332 2333334 4 34788999999998888878766554331100 1 11 1245898887521
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. +.....+....+.+.|++.++....
T Consensus 115 ~--~~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 115 H--HQGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp S--HHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred C--hHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 1 1112233445666777878777643
No 400
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=69.55 E-value=6.5 Score=37.26 Aligned_cols=90 Identities=16% Similarity=0.124 Sum_probs=56.9
Q ss_pred CeEEEeC-C-CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC-----CCCCccEEEecccc
Q 017377 218 QSVLDVG-C-GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY-----PSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIG-C-G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~-----~~~sFDlV~~~~~~ 290 (372)
.+||=+| + |.|.++..+++.. ...+++++ ++...+.+++.|....+. .....+ ....+|+|+-+-.
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~~lGa~~v~~---~~~~~~~~~~~~~~g~D~vid~~g- 257 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVRKLGADDVID---YKSGSVEEQLKSLKPFDFILDNVG- 257 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHHTTCSEEEE---TTSSCHHHHHHTSCCBSEEEESSC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHHHcCCCEEEE---CCchHHHHHHhhcCCCCEEEECCC-
Confidence 7899998 3 4677777777652 23566677 566778888777654332 111111 1146999986532
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.. ...+....+.|++||.++....
T Consensus 258 ----~~-~~~~~~~~~~l~~~G~iv~~g~ 281 (375)
T 2vn8_A 258 ----GS-TETWAPDFLKKWSGATYVTLVT 281 (375)
T ss_dssp ----TT-HHHHGGGGBCSSSCCEEEESCC
T ss_pred ----Ch-hhhhHHHHHhhcCCcEEEEeCC
Confidence 11 1245677889999999988653
No 401
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=68.97 E-value=6.4 Score=38.10 Aligned_cols=43 Identities=16% Similarity=0.164 Sum_probs=32.3
Q ss_pred CeEEEeCCCCcHHHHHHHhc--C----CceeEEEEeeCCHHHHHHHHHc
Q 017377 218 QSVLDVGCGFGSFGAHLVSL--K----LMAVCVAVYEATGSQVQLALER 260 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~--~----~~~~~v~gvD~s~~~v~~A~~r 260 (372)
-.|+|+|.|.|.++.-++.. . .....++.+|+|+...+.-+++
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~ 130 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTL 130 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHH
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHH
Confidence 47999999999998877643 1 1235788899999887655543
No 402
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=67.84 E-value=7.8 Score=36.72 Aligned_cols=91 Identities=15% Similarity=0.152 Sum_probs=58.2
Q ss_pred CeEEEeCCC--CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC-----CCCCCCccEEEecccc
Q 017377 218 QSVLDVGCG--FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL-----PYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG--~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l-----p~~~~sFDlV~~~~~~ 290 (372)
.+||=+|++ .|.++..+++.. ...++++. ++.-.+.+++.|....+. ....++ ...++.+|+|+-.-.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~t~g~~d~v~d~~g- 240 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKSRGAEEVFD-YRAPNLAQTIRTYTKNNLRYALDCIT- 240 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHHTTCSEEEE-TTSTTHHHHHHHHTTTCCCEEEESSC-
T ss_pred cEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHHcCCcEEEE-CCCchHHHHHHHHccCCccEEEECCC-
Confidence 789999983 788888888762 23455554 777888998888654432 111110 011245999986522
Q ss_pred ccccccHHHHHHHHHhcc-cCCeEEEEEeC
Q 017377 291 IIWDKKEGIFLIEADRLL-KPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvL-kPGG~lvis~p 319 (372)
. ...+....+.| ++||.++....
T Consensus 241 -----~-~~~~~~~~~~l~~~~G~iv~~g~ 264 (371)
T 3gqv_A 241 -----N-VESTTFCFAAIGRAGGHYVSLNP 264 (371)
T ss_dssp -----S-HHHHHHHHHHSCTTCEEEEESSC
T ss_pred -----c-hHHHHHHHHHhhcCCCEEEEEec
Confidence 1 12567778888 69999998653
No 403
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=67.78 E-value=37 Score=31.36 Aligned_cols=90 Identities=20% Similarity=0.184 Sum_probs=57.0
Q ss_pred CeEEEeCCCC--cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~--G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|.=||+|. +.++..|.+.|. ...|+++|.++..++.+.+.|...... .+...+ .-...|+|+..- .. .
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr~~~~~~~a~~~G~~~~~~-~~~~~~--~~~~aDvVilav---p~-~ 105 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEGT-TSIAKV--EDFSPDFVMLSS---PV-R 105 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEEE-SCTTGG--GGGCCSEEEECS---CG-G
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHCCCcchhc-CCHHHH--hhccCCEEEEeC---CH-H
Confidence 5788899874 345566666664 236889999999999998887642221 111110 124579998752 11 2
Q ss_pred cHHHHHHHHHhcccCCeEEE
Q 017377 296 KEGIFLIEADRLLKPGGYFV 315 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lv 315 (372)
....++.++...++||..++
T Consensus 106 ~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp GHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHhhccCCCcEEE
Confidence 33457888888898887554
No 404
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=66.58 E-value=33 Score=31.97 Aligned_cols=91 Identities=15% Similarity=0.103 Sum_probs=53.9
Q ss_pred CeEEEeCC--CCcHHHHHHHhc-CCceeEEEEeeCCH---HHHHHHHHcCCCeEEEEee--ccCC-CC-CC-CCccEEEe
Q 017377 218 QSVLDVGC--GFGSFGAHLVSL-KLMAVCVAVYEATG---SQVQLALERGLPAMIGNFI--SRQL-PY-PS-LSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~-~~~~~~v~gvD~s~---~~v~~A~~rgl~~~~~~~d--~~~l-p~-~~-~sFDlV~~ 286 (372)
.+||=+|+ |.|.++..+++. |.. .++.++.++ ...+.+++.|....+..-+ ...+ .. .. +.+|+|+-
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~--vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvvid 246 (357)
T 1zsy_A 169 DSVIQNASNSGVGQAVIQIAAALGLR--TINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLALN 246 (357)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTCE--EEEEECCCSCHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEEEE
T ss_pred CEEEEeCCcCHHHHHHHHHHHHcCCE--EEEEecCccchHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEEEE
Confidence 78999997 568888888875 432 234445432 3467787778664432110 0111 11 11 14899886
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 287 ~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
.-. .. .+.+..++|+|||.+++..
T Consensus 247 ~~g------~~--~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 247 CVG------GK--SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSC------HH--HHHHHHTTSCTTCEEEECC
T ss_pred CCC------cH--HHHHHHHhhCCCCEEEEEe
Confidence 422 11 2245789999999999875
No 405
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=66.31 E-value=6.9 Score=38.08 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=60.1
Q ss_pred CeEEEeCCCCcHHHHHHH----hcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccC-C-CCCCCCccEEEeccccc
Q 017377 218 QSVLDVGCGFGSFGAHLV----SLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQ-L-PYPSLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~----~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~-l-p~~~~sFDlV~~~~~~~ 291 (372)
.+|+=+|+| .+|..++ +.+ ..|+.+|.++..++.+++.|.++.+++..... + ...-...|+|++...
T Consensus 5 ~~viIiG~G--r~G~~va~~L~~~g---~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~-- 77 (413)
T 3l9w_A 5 MRVIIAGFG--RFGQITGRLLLSSG---VKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID-- 77 (413)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTT---CCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS--
T ss_pred CeEEEECCC--HHHHHHHHHHHHCC---CCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC--
Confidence 457778875 4444443 334 44788999999999999889888777542111 1 012346888887522
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.+.....+....|-+.|...++......
T Consensus 78 --~~~~n~~i~~~ar~~~p~~~Iiara~~~ 105 (413)
T 3l9w_A 78 --DPQTNLQLTEMVKEHFPHLQIIARARDV 105 (413)
T ss_dssp --SHHHHHHHHHHHHHHCTTCEEEEEESSH
T ss_pred --ChHHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 1222345667778888998887765543
No 406
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=65.36 E-value=49 Score=32.78 Aligned_cols=41 Identities=20% Similarity=0.180 Sum_probs=34.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALER 260 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r 260 (372)
-+++|+=||.|.++.-+...|+ -.+.++|+++..++.-+.+
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~--~~v~avE~d~~A~~ty~~N 129 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGG--QCVFTSEWNKHAVRTYKAN 129 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTE--EEEEEECCCHHHHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHCCC--EEEEEEeCCHHHHHHHHHh
Confidence 5899999999999999887775 3478899999998876655
No 407
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=61.67 E-value=3.5 Score=39.60 Aligned_cols=100 Identities=17% Similarity=0.065 Sum_probs=54.7
Q ss_pred CCCeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHH-cCCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 216 GVQSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALE-RGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 216 ~~~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~-rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
...+|+=+|+|. |...+.++.. ..+.|+++|.++..++.+.+ .+........+...+.-.-..+|+|+..-. ...
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~--~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~-~p~ 243 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANG--MGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL-VPG 243 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC-CTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCC-cCC
Confidence 347899999863 3333333333 12468899999998877766 354432221111111000125799987421 111
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEe
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
.+.+..+..++.+.+||||.++...
T Consensus 244 ~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 244 AKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp SCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcceecHHHHhcCCCCcEEEEEe
Confidence 1111113456778899999988765
No 408
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=61.33 E-value=9.2 Score=35.75 Aligned_cols=89 Identities=9% Similarity=0.058 Sum_probs=56.3
Q ss_pred CeEEEe-CCC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCC--------CCCccEEEec
Q 017377 218 QSVLDV-GCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYP--------SLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDI-GCG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~--------~~sFDlV~~~ 287 (372)
.+||=. |+| .|..+..+++. ....++++|.++...+.+++.|....+. .....+. ...+|+|+-+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~---~~~~~~~~~v~~~~~~~g~D~vid~ 240 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKE--EGFRPIVTVRRDEQIALLKDIGAAHVLN---EKAPDFEATLREVMKAEQPRIFLDA 240 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESCGGGHHHHHHHTCSEEEE---TTSTTHHHHHHHHHHHHCCCEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCCEEEE---CCcHHHHHHHHHHhcCCCCcEEEEC
Confidence 456543 333 46666666665 2246888999999899998888654332 2221111 1369999865
Q ss_pred cccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 288 QCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 288 ~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
-.. ..+....+.|++||.+++...
T Consensus 241 ~g~--------~~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 241 VTG--------PLASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp SCH--------HHHHHHHHHSCTTCEEEECCC
T ss_pred CCC--------hhHHHHHhhhcCCCEEEEEec
Confidence 321 134677889999999998764
No 409
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=58.15 E-value=55 Score=29.03 Aligned_cols=85 Identities=19% Similarity=0.071 Sum_probs=51.4
Q ss_pred eEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 219 SVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 219 ~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
+|.=||||. | .++..|.+.+. .|+++|.++..++.+.+.+...... .+.... ...|+|+..-- ...
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~----~~~D~vi~av~----~~~ 69 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH---YLIGVSRQQSTCEKAVERQLVDEAG-QDLSLL----QTAKIIFLCTP----IQL 69 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTSCSEEE-SCGGGG----TTCSEEEECSC----HHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC---EEEEEECCHHHHHHHHhCCCCcccc-CCHHHh----CCCCEEEEECC----HHH
Confidence 466688874 2 23444555553 5788999999888877766643211 112221 45799987521 122
Q ss_pred HHHHHHHHHhcccCCeEEE
Q 017377 297 EGIFLIEADRLLKPGGYFV 315 (372)
Q Consensus 297 ~~~~L~el~rvLkPGG~lv 315 (372)
...++.++...++||..++
T Consensus 70 ~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 70 ILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HHHHHHHHGGGSCTTCEEE
T ss_pred HHHHHHHHHhhCCCCCEEE
Confidence 3457788888888877553
No 410
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=56.38 E-value=7.2 Score=38.28 Aligned_cols=41 Identities=20% Similarity=0.281 Sum_probs=30.0
Q ss_pred CeEEEeCCCCcHHHHHHHhc----CCceeEEEEeeCCHHHHHHHH
Q 017377 218 QSVLDVGCGFGSFGAHLVSL----KLMAVCVAVYEATGSQVQLAL 258 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~----~~~~~~v~gvD~s~~~v~~A~ 258 (372)
-+|+|+|.|.|.++.-++.. +....+++.+|+|+...+.-+
T Consensus 139 ~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~ 183 (432)
T 4f3n_A 139 RRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQR 183 (432)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHH
T ss_pred CeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHH
Confidence 68999999999998877642 222346888999987654433
No 411
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=55.41 E-value=7.4 Score=37.58 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=55.4
Q ss_pred CCeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEee---------c------------cCC
Q 017377 217 VQSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI---------S------------RQL 274 (372)
Q Consensus 217 ~~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d---------~------------~~l 274 (372)
+.+|+=||+|. |..++.++.. ....|+++|.++...+.+.+.|... ...+ . ..+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~~~l~~~~~lGa~~--~~l~~~~~~~~gya~~~~~~~~~~~~~~l 259 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKR--LGAKTTGYDVRPEVAEQVRSVGAQW--LDLGIDAAGEGGYARELSEAERAQQQQAL 259 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH--HTCEEEEECSSGGGHHHHHHTTCEE--CCCC-------------CHHHHHHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCeE--EeccccccccccchhhhhHHHHhhhHHHH
Confidence 46899999985 4444444443 2246889999998888887765432 1110 0 000
Q ss_pred CCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEE
Q 017377 275 PYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 275 p~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis 317 (372)
.-.-...|+|+.. ++..-...+..+-+++.+.+|||+.++=.
T Consensus 260 ~e~l~~aDIVI~t-v~iPg~~ap~Lvt~emv~~MkpGsVIVDv 301 (381)
T 3p2y_A 260 EDAITKFDIVITT-ALVPGRPAPRLVTAAAATGMQPGSVVVDL 301 (381)
T ss_dssp HHHHTTCSEEEEC-CCCTTSCCCCCBCHHHHHTSCTTCEEEET
T ss_pred HHHHhcCCEEEEC-CCCCCcccceeecHHHHhcCCCCcEEEEE
Confidence 0011568999975 21221112222346788889999887743
No 412
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=53.86 E-value=16 Score=36.56 Aligned_cols=87 Identities=18% Similarity=0.084 Sum_probs=53.9
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
++|+=+|+|. |...+.+++. ..+.|+++|.++...+.|.+.|.. .. +..+. -...|+|+..-...+.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka--~Ga~Viv~d~~~~~~~~A~~~Ga~--~~--~l~e~---l~~aDvVi~atgt~~~--- 342 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKG--QGARVSVTEIDPINALQAMMEGFD--VV--TVEEA---IGDADIVVTATGNKDI--- 342 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHTTCE--EC--CHHHH---GGGCSEEEECSSSSCS---
T ss_pred CEEEEEccCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCE--Ee--cHHHH---HhCCCEEEECCCCHHH---
Confidence 7899999863 4433333333 125688999999988888877763 21 11111 1358999875322222
Q ss_pred HHHHHHHHHhcccCCeEEEEEeC
Q 017377 297 EGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 297 ~~~~L~el~rvLkPGG~lvis~p 319 (372)
+-.+..+.+||||+++....
T Consensus 343 ---i~~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 343 ---IMLEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp ---BCHHHHHHSCTTCEEEECSS
T ss_pred ---HHHHHHHhcCCCcEEEEeCC
Confidence 11245667899999987755
No 413
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=52.97 E-value=7.1 Score=37.18 Aligned_cols=99 Identities=17% Similarity=0.105 Sum_probs=51.9
Q ss_pred CCeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHH-cCCCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 217 VQSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALE-RGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 217 ~~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~-rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
+.+|+=+|+|. |...+.++.. ..+.|+++|.++...+.+.+ .+..+.....+...+.-.-..+|+|+.+-.... .
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~--~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~-~ 242 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALG--MGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPG-A 242 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC-----
T ss_pred CCEEEEECCCHHHHHHHHHHHh--CCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCc-c
Confidence 47899999852 3333333332 12468889999988877765 344322111111111000135899987532111 0
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEe
Q 017377 295 KKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 295 ~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
..+..+..++.+.++|||.++...
T Consensus 243 ~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 243 KAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp ---CCSCHHHHTTSCTTCEEEECC
T ss_pred ccchhHHHHHHHhhcCCCEEEEEe
Confidence 111113466778889999988654
No 414
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=52.69 E-value=70 Score=28.57 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=53.6
Q ss_pred CeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEE------EEeeccCC-CCCC--CCccEEEe
Q 017377 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMI------GNFISRQL-PYPS--LSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~------~~~d~~~l-p~~~--~sFDlV~~ 286 (372)
.+|.=||+|. |. ++..|++.+ ..|+.+|.++..++...+.++.... ........ .... ...|+|+.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGG---NDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 4688889874 33 344555555 3578899999888877776643221 00000000 0111 26899987
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEE
Q 017377 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 287 ~~~~~~~~~~~~~~L~el~rvLkPGG~lvis 317 (372)
.-- . .....++.++...++|+..++..
T Consensus 81 ~v~--~--~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 81 LTK--A--QQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CSC--H--HHHHHHHHHHGGGCCTTCEEEEC
T ss_pred Eec--c--ccHHHHHHHHHHhcCCCCEEEEe
Confidence 521 1 22345788888888887665543
No 415
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=52.63 E-value=46 Score=26.08 Aligned_cols=90 Identities=16% Similarity=0.175 Sum_probs=51.5
Q ss_pred CeEEEeCCCCcHHHHHHH----hcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC----CCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLV----SLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP----YPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~----~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp----~~~~sFDlV~~~~~ 289 (372)
.+|+=+|+|. +|..++ +.+ ..++++|.++..++.+.+.+..+..+ |..+.. ..-..+|+|+..-.
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g---~~V~~id~~~~~~~~~~~~~~~~~~g--d~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAG---KKVLAVDKSKEKIELLEDEGFDAVIA--DPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTT---CCEEEEESCHHHHHHHHHTTCEEEEC--CTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCH--HHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHCCCcEEEC--CCCCHHHHHhCCcccCCEEEEecC
Confidence 4688899864 444444 344 35788999999998888777554443 322211 12246898887532
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.+.....+....+-+. .+.++....
T Consensus 80 ----~~~~n~~~~~~a~~~~-~~~iia~~~ 104 (141)
T 3llv_A 80 ----DDEFNLKILKALRSVS-DVYAIVRVS 104 (141)
T ss_dssp ----CHHHHHHHHHHHHHHC-CCCEEEEES
T ss_pred ----CHHHHHHHHHHHHHhC-CceEEEEEc
Confidence 1222233444455555 555555544
No 416
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=52.56 E-value=26 Score=38.13 Aligned_cols=128 Identities=13% Similarity=0.044 Sum_probs=72.7
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC---------------CCC-CCC
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL---------------PYP-SLS 280 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l---------------p~~-~~s 280 (372)
..+++|+=||.|.++.-|...|+. ..+.++|+++..++.-+.+.....+...|+..+ .++ .+.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~-~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~~~~ 618 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGIS-DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQKGD 618 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSE-EEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCCTTT
T ss_pred CCeEEEeccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhcccCCC
Confidence 358999999999999998887762 347789999999987776655544443332110 122 357
Q ss_pred ccEEEecc-----cccccc-----ccHH-HH---HHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhc
Q 017377 281 FDMVHCAQ-----CGIIWD-----KKEG-IF---LIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKI 346 (372)
Q Consensus 281 FDlV~~~~-----~~~~~~-----~~~~-~~---L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~l 346 (372)
+|+|+... +...-. .+.. .+ +.++.+.++|--.++=.+++.-.. .....+..+....+.+
T Consensus 619 vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~------~~~~~~~~i~~~L~~l 692 (1002)
T 3swr_A 619 VEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSF------KRSMVLKLTLRCLVRM 692 (1002)
T ss_dssp CSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTT------GGGHHHHHHHHHHHHH
T ss_pred eeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhcc------CcchHHHHHHHHHHhc
Confidence 99998742 111110 1111 12 334556678875444444432210 2223455554445667
Q ss_pred CeeEE
Q 017377 347 CWSLI 351 (372)
Q Consensus 347 cw~~~ 351 (372)
++.+.
T Consensus 693 GY~v~ 697 (1002)
T 3swr_A 693 GYQCT 697 (1002)
T ss_dssp TCEEE
T ss_pred CCeEE
Confidence 76654
No 417
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=51.58 E-value=85 Score=28.71 Aligned_cols=93 Identities=17% Similarity=0.099 Sum_probs=55.7
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEE------EEee-ccCCCCCCCCccEEEecc
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMI------GNFI-SRQLPYPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~------~~~d-~~~lp~~~~sFDlV~~~~ 288 (372)
.+|.=||+|. | .++..|++.+. .|+.+ ..++.++..++.|+.... .... ..+.. ....+|+|+..-
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~---~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~vilav 94 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGH---EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLVLFCV 94 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC---EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEEEECC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCC---eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEEEEEc
Confidence 6788899884 3 34555555553 46667 788888888777653321 0000 01111 124689998752
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
- . .....++.++...++|+..++....
T Consensus 95 k--~--~~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 95 K--S--TDTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp C--G--GGHHHHHHHHTTTSCTTCEEEEECS
T ss_pred c--c--ccHHHHHHHHHHhcCCCCEEEEeCC
Confidence 1 1 2345688999999999876665533
No 418
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=50.95 E-value=77 Score=28.11 Aligned_cols=89 Identities=19% Similarity=0.124 Sum_probs=52.2
Q ss_pred eEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCC-CccEEEeccccccccc
Q 017377 219 SVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSL-SFDMVHCAQCGIIWDK 295 (372)
Q Consensus 219 ~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~-sFDlV~~~~~~~~~~~ 295 (372)
+|.=||+|. | .++..|.+.+. ...|+++|.++..++.+.+.|...... .+... .-. ..|+|+..-- . .
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~~~~~~~~~~~~g~~~~~~-~~~~~---~~~~~aDvVilavp---~-~ 73 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEGT-TSIAK---VEDFSPDFVMLSSP---V-R 73 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEEE-SCGGG---GGGTCCSEEEECSC---H-H
T ss_pred EEEEEecCHHHHHHHHHHHhcCC-CcEEEEEeCCHHHHHHHHHCCCccccc-CCHHH---HhcCCCCEEEEcCC---H-H
Confidence 567788774 3 23444455553 236888999999888887777642211 11111 112 5799887511 1 1
Q ss_pred cHHHHHHHHHhcccCCeEEEE
Q 017377 296 KEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvi 316 (372)
....++.++...+++|..++.
T Consensus 74 ~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 74 TFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp HHHHHHHHHHHHSCTTCEEEE
T ss_pred HHHHHHHHHHhhCCCCcEEEE
Confidence 223577788888888875543
No 419
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=50.11 E-value=55 Score=29.67 Aligned_cols=88 Identities=16% Similarity=0.071 Sum_probs=50.2
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|.=||+|. | .++..|++.+ ..|+++|.++..++.+.+.|..... .+..+ .-...|+|+..- .-..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~dr~~~~~~~~~~~g~~~~~--~~~~e---~~~~aDvvi~~v---p~~~ 76 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAG---LSTWGADLNPQACANLLAEGACGAA--ASARE---FAGVVDALVILV---VNAA 76 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTTCSEEE--SSSTT---TTTTCSEEEECC---SSHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC---CeEEEEECCHHHHHHHHHcCCcccc--CCHHH---HHhcCCEEEEEC---CCHH
Confidence 5688888874 2 2445555555 3578899999999888877754311 11111 123468888751 1111
Q ss_pred cHHHHH---HHHHhcccCCeEEEE
Q 017377 296 KEGIFL---IEADRLLKPGGYFVL 316 (372)
Q Consensus 296 ~~~~~L---~el~rvLkPGG~lvi 316 (372)
....++ .++...++||..++-
T Consensus 77 ~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 77 QVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp HHHHHHC--CCCGGGSCTTCEEEE
T ss_pred HHHHHHhChhhHHhhCCCCCEEEe
Confidence 122334 455667777766543
No 420
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=49.01 E-value=98 Score=29.22 Aligned_cols=92 Identities=11% Similarity=-0.056 Sum_probs=55.4
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHH----HHHHcCCC---eEEEEeeccCCCCCCCCccEEEecccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQ----LALERGLP---AMIGNFISRQLPYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~----~A~~rgl~---~~~~~~d~~~lp~~~~sFDlV~~~~~~ 290 (372)
.+||.|+.+.|.++..|+..++ ..+ -| |-...+ -+..++++ +.+. +. +.-....||+|+..--
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~--~~~--~d-s~~~~~~~~~n~~~~~~~~~~~~~~--~~--~~~~~~~~~~v~~~lp- 109 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKP--YSI--GD-SYISELATRENLRLNGIDESSVKFL--DS--TADYPQQPGVVLIKVP- 109 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCC--EEE--ES-CHHHHHHHHHHHHHTTCCGGGSEEE--ET--TSCCCSSCSEEEEECC-
T ss_pred CCEEEECCCCCHHHHhhccCCc--eEE--Eh-HHHHHHHHHHHHHHcCCCccceEec--cc--ccccccCCCEEEEEcC-
Confidence 5799999999999988876643 222 24 332222 22234554 3333 22 2223467999886411
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
-+ .......|..+...|+||+.+++.+.+
T Consensus 110 k~-~~~l~~~L~~l~~~l~~~~~i~~~g~~ 138 (375)
T 4dcm_A 110 KT-LALLEQQLRALRKVVTSDTRIIAGAKA 138 (375)
T ss_dssp SC-HHHHHHHHHHHHTTCCTTSEEEEEEEG
T ss_pred CC-HHHHHHHHHHHHhhCCCCCEEEEEecc
Confidence 11 123345788899999999999887653
No 421
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=48.79 E-value=1.4e+02 Score=26.12 Aligned_cols=66 Identities=11% Similarity=-0.027 Sum_probs=41.9
Q ss_pred CeEEEeCCCCcHHHHHHHhcC-CceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLK-LMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~-~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~ 289 (372)
++||=+| + |..|..+++.- -....|++++-++...+.....+ +.+..+|..++. -..+|+|+....
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~d~~--~~~~d~vi~~a~ 72 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASG--AEPLLWPGEEPS--LDGVTHLLISTA 72 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTT--EEEEESSSSCCC--CTTCCEEEECCC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCC--CeEEEecccccc--cCCCCEEEECCC
Confidence 5799999 4 88887776541 11256778888776555444433 455555666655 456898887544
No 422
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=47.57 E-value=1.1e+02 Score=29.82 Aligned_cols=90 Identities=20% Similarity=0.200 Sum_probs=53.0
Q ss_pred CCeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-----------CC-------C--eEEEEeeccCC
Q 017377 217 VQSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALER-----------GL-------P--AMIGNFISRQL 274 (372)
Q Consensus 217 ~~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-----------gl-------~--~~~~~~d~~~l 274 (372)
..+|.=||+|. |. ++..++..| ..|+.+|.+++.++.+.+. +. . ..+ ..+..
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G---~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~-- 110 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVG---ISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK-- 110 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTT---CEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGG--
T ss_pred CCEEEEECcCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHH--
Confidence 35788999986 33 455555555 4578899999888765431 10 0 111 11111
Q ss_pred CCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEE
Q 017377 275 PYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 275 p~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvi 316 (372)
.-...|+|+.+-. ... +-...++.++...++||..++.
T Consensus 111 --~~~~aDlVIeaVp-e~~-~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 111 --ELSTVDLVVEAVF-EDM-NLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --GGTTCSEEEECCC-SCH-HHHHHHHHHHHHHSCTTCEEEE
T ss_pred --HHCCCCEEEEcCC-CCH-HHHHHHHHHHHhhCCCCeEEEe
Confidence 1245799987621 111 1124578889999999877654
No 423
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=47.13 E-value=85 Score=28.02 Aligned_cols=72 Identities=14% Similarity=0.073 Sum_probs=46.1
Q ss_pred CeEEEeCCCCcH---HHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC-----CCCCCccEEEeccc
Q 017377 218 QSVLDVGCGFGS---FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP-----YPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~G~---~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp-----~~~~sFDlV~~~~~ 289 (372)
+++|=.|.+.|. .+..|++.|..+ -++..+..+...+...+.+..+.....|..+.. +..+..|+++.+-.
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~V-vi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNAG 88 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEV-VCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNAG 88 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEE-EEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECCC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEE-EEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECCC
Confidence 778888988875 455666667542 233344445666777777877776666544321 34578999998754
Q ss_pred c
Q 017377 290 G 290 (372)
Q Consensus 290 ~ 290 (372)
.
T Consensus 89 i 89 (247)
T 4hp8_A 89 I 89 (247)
T ss_dssp C
T ss_pred C
Confidence 3
No 424
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=46.58 E-value=94 Score=27.72 Aligned_cols=84 Identities=15% Similarity=0.037 Sum_probs=49.6
Q ss_pred CeEEEeCC-CC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 218 QSVLDVGC-GF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 218 ~~VLDIGC-G~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.+|.=||+ |. | .++..|++.+. .|+.+|.++..++.+.+.|+.. ....-.-...|+|+..-- -
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~---~V~~~~r~~~~~~~~~~~g~~~-------~~~~~~~~~aDvVi~av~---~- 77 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH---HLAAIEIAPEGRDRLQGMGIPL-------TDGDGWIDEADVVVLALP---D- 77 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS---EEEEECCSHHHHHHHHHTTCCC-------CCSSGGGGTCSEEEECSC---H-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC---EEEEEECCHHHHHHHHhcCCCc-------CCHHHHhcCCCEEEEcCC---c-
Confidence 47888998 74 3 34455555553 5778899998887777655432 111111235798887521 1
Q ss_pred ccHHHHHHHHHhcccCCeEEE
Q 017377 295 KKEGIFLIEADRLLKPGGYFV 315 (372)
Q Consensus 295 ~~~~~~L~el~rvLkPGG~lv 315 (372)
.....++.++...++||..++
T Consensus 78 ~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 78 NIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp HHHHHHHHHHGGGSCTTCEEE
T ss_pred hHHHHHHHHHHHhCCCCCEEE
Confidence 123456677777777765443
No 425
>1j9i_A GPNU1 DBD;, terminase small subunit; DNA binding domain, homodimer, viral assembly, winged helix-turn-helix, viral protein; NMR {Enterobacteria phage lambda} SCOP: a.6.1.5
Probab=45.60 E-value=3.7 Score=29.02 Aligned_cols=44 Identities=11% Similarity=-0.114 Sum_probs=34.6
Q ss_pred HHHHHHHhcccccccceeccCCCCcccc--chhhhhHHHhHHHHhhc
Q 017377 30 VALIAVLGSSTSNTLDFVTSSSKPDIYS--SYRRLKEQAAVDYLELR 74 (372)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~y~~~~~~~~~~~~~~~ 74 (372)
+|.++|+|++|+--|.+-|. ...+..+ +-.+|...|+.+.+.-+
T Consensus 8 ~a~~LgvS~~Tl~rw~~~G~-P~~~~~g~~~~~~y~~~dv~~wl~~~ 53 (68)
T 1j9i_A 8 LADIFGASIRTIQNWQEQGM-PVLRGGGKGNEVLYDSAAVIKWYAER 53 (68)
T ss_dssp HHHHTTCCHHHHHHHTTTTC-CCSSCCCSSSCCEEEHHHHHHHHTTT
T ss_pred HHHHHCcCHHHHHHHHHCCC-CeEeeCCCcceEEECHHHHHHHHHHC
Confidence 68899999999988998887 4333332 48899999999987655
No 426
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=44.94 E-value=16 Score=34.02 Aligned_cols=89 Identities=21% Similarity=0.157 Sum_probs=50.6
Q ss_pred CeEEEeCC--CCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCC-----CCCCCCccEEEecccc
Q 017377 218 QSVLDVGC--GFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQL-----PYPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~l-----p~~~~sFDlV~~~~~~ 290 (372)
.+||=+|+ |.|.++..+++... ...+++++ ++...+.++ .|....+. ...++ ....+.+|+|+-.-.
T Consensus 144 ~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-~ga~~~~~--~~~~~~~~~~~~~~~g~Dvv~d~~g- 217 (349)
T 4a27_A 144 MSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-DSVTHLFD--RNADYVQEVKRISAEGVDIVLDCLC- 217 (349)
T ss_dssp CEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-GGSSEEEE--TTSCHHHHHHHHCTTCEEEEEEECC-
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-cCCcEEEc--CCccHHHHHHHhcCCCceEEEECCC-
Confidence 78999998 35777777776521 24566666 455556665 56544332 11110 012357999986422
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. ..+....+.|++||.+++...
T Consensus 218 ----~---~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 218 ----G---DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp --------------CTTEEEEEEEEEEC-
T ss_pred ----c---hhHHHHHHHhhcCCEEEEECC
Confidence 1 123677899999999998764
No 427
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=44.46 E-value=46 Score=25.81 Aligned_cols=79 Identities=14% Similarity=0.002 Sum_probs=46.2
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccccH
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKKE 297 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~~ 297 (372)
.+|| +-|+.|-.+..|+++ |-+.|.++|+++.+.........-.-..||+|+..- ..
T Consensus 7 mkIl-L~C~aGmSTsllv~k---------------m~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgP-------QV 63 (108)
T 3nbm_A 7 LKVL-VLCAGSGTSAQLANA---------------INEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAP-------QV 63 (108)
T ss_dssp EEEE-EEESSSSHHHHHHHH---------------HHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECG-------GG
T ss_pred ceEE-EECCCCCCHHHHHHH---------------HHHHHHHCCCceEEEEcchHHHHhhccCCCEEEECh-------HH
Confidence 4566 347777666666543 455688889987765433333333335699999862 22
Q ss_pred HHHHHHHHhcccCCeEEEEEeC
Q 017377 298 GIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p 319 (372)
...+.++.....+-|.=+...+
T Consensus 64 ~y~~~~ik~~~~~~~ipV~vI~ 85 (108)
T 3nbm_A 64 RSYYREMKVDAERLGIQIVATR 85 (108)
T ss_dssp GGGHHHHHHHHTTTTCEEEECC
T ss_pred HHHHHHHHHHhhhcCCcEEEeC
Confidence 2245666766766565444433
No 428
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=42.26 E-value=49 Score=25.64 Aligned_cols=54 Identities=9% Similarity=0.163 Sum_probs=30.1
Q ss_pred eEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEec
Q 017377 219 SVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCA 287 (372)
Q Consensus 219 ~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~ 287 (372)
+|| +-||+|.-+..|+.. .+-+.+.+.|+.+.+...+...++-....+|+|++.
T Consensus 23 kIl-vvC~sG~gTS~ll~~--------------kl~~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist 76 (113)
T 1tvm_A 23 KII-VACGGAVATSTMAAE--------------EIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTT 76 (113)
T ss_dssp EEE-EESCSCSSHHHHHHH--------------HHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEES
T ss_pred EEE-EECCCCHHHHHHHHH--------------HHHHHHHHcCCeEEEEEecHHHHhhccCCCCEEEEC
Confidence 344 447777666665432 122345566777555544555554333468888876
No 429
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=42.02 E-value=1.3e+02 Score=26.79 Aligned_cols=89 Identities=20% Similarity=0.181 Sum_probs=50.9
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|.=||+|. | .++..|.+.+. ...|+++|.++..++.+.+.|...... .++.-.-...|+|+..-- . .
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d~~~~~~~~~~~~g~~~~~~----~~~~~~~~~aDvVilavp---~-~ 77 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHP-HYKIVGYNRSDRSRDIALERGIVDEAT----ADFKVFAALADVIILAVP---I-K 77 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHTTSCSEEE----SCTTTTGGGCSEEEECSC---H-H
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCC-CcEEEEEcCCHHHHHHHHHcCCccccc----CCHHHhhcCCCEEEEcCC---H-H
Confidence 5688889875 2 34445555432 246888999998888777766532111 111111135788887511 1 1
Q ss_pred cHHHHHHHHHhc-ccCCeEEE
Q 017377 296 KEGIFLIEADRL-LKPGGYFV 315 (372)
Q Consensus 296 ~~~~~L~el~rv-LkPGG~lv 315 (372)
....++.++... +++|..++
T Consensus 78 ~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 78 KTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp HHHHHHHHHHTSCCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCCEEE
Confidence 123467777777 77765444
No 430
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=40.13 E-value=54 Score=33.26 Aligned_cols=69 Identities=20% Similarity=0.284 Sum_probs=41.8
Q ss_pred CCCCCCCccEEEec----ccccccc--ccHH----HHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHH
Q 017377 274 LPYPSLSFDMVHCA----QCGIIWD--KKEG----IFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFT 343 (372)
Q Consensus 274 lp~~~~sFDlV~~~----~~~~~~~--~~~~----~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~ 343 (372)
+| +.+.||+|+++ +-.+|+. +|-. .+-....+.|+|||.+++....... +..-..+..++
T Consensus 216 ~p-~~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyAD---------r~sE~vv~ala 285 (670)
T 4gua_A 216 FP-PQARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYAD---------RNSEDVVTALA 285 (670)
T ss_dssp CC-CCCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCS---------HHHHHHHHHHH
T ss_pred CC-CCCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccc---------cchHHHHHHHH
Confidence 45 34689999997 2234442 2211 2334578899999999999887654 23334556666
Q ss_pred HhcCeeEEe
Q 017377 344 EKICWSLIA 352 (372)
Q Consensus 344 ~~lcw~~~~ 352 (372)
.+.-..-+.
T Consensus 286 RkF~~~rv~ 294 (670)
T 4gua_A 286 RKFVRVSAA 294 (670)
T ss_dssp HTEEEEEEE
T ss_pred hheeeeeee
Confidence 654443333
No 431
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=39.89 E-value=7 Score=37.14 Aligned_cols=99 Identities=11% Similarity=0.021 Sum_probs=53.4
Q ss_pred CCeEEEeCCCC-cHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCC-eEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 217 VQSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLP-AMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 217 ~~~VLDIGCG~-G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~-~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
+.+|+=+|+|. |..+..++.. | ..|+.+|.++.-.+.+.+.+.. +.....+...+.-.-..+|+|+..-. ...
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~G---a~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~-~~~ 242 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLG---AQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVL-VPG 242 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCC-CTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCC-cCC
Confidence 47899999863 3334444433 4 3688899999888777655322 21111111111000125899986532 211
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
...+..+..+..+.++|||.++....
T Consensus 243 ~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 243 RRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp SSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred CCCCeecCHHHHhhCCCCCEEEEEec
Confidence 11111123456778999998887543
No 432
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=39.47 E-value=28 Score=31.92 Aligned_cols=62 Identities=18% Similarity=0.167 Sum_probs=38.4
Q ss_pred CCCccEEEec----ccccccc--ccHH----HHHHHHHhcccCCeEEEEEeCCCCCCCCCCcchhhHHHHHHHHHHHhcC
Q 017377 278 SLSFDMVHCA----QCGIIWD--KKEG----IFLIEADRLLKPGGYFVLTSPESKPRGSSSSRKNKSLLKVMEEFTEKIC 347 (372)
Q Consensus 278 ~~sFDlV~~~----~~~~~~~--~~~~----~~L~el~rvLkPGG~lvis~p~~~~~~~~~~~e~~~~w~~i~~l~~~lc 347 (372)
-+.||+|+++ +-.+|+- +|-. .+-....+.|+|||.+++....... +..-..+..++.+.-
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyAD---------R~SE~vV~alARkF~ 279 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYAD---------RTSERVICVLGRKFR 279 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCS---------HHHHHHHHHHHTTEE
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccc---------cchHHHHHHHHhhhe
Confidence 3789999997 2223442 2221 2334567899999999999887654 233344566665533
Q ss_pred e
Q 017377 348 W 348 (372)
Q Consensus 348 w 348 (372)
.
T Consensus 280 ~ 280 (324)
T 3trk_A 280 S 280 (324)
T ss_dssp E
T ss_pred e
Confidence 3
No 433
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=39.42 E-value=2.1e+02 Score=27.92 Aligned_cols=91 Identities=10% Similarity=-0.066 Sum_probs=52.2
Q ss_pred CCeEEEeCCCC--cHHHHHHHhcCCceeEEEEeeCCHHH--------HHHHHHcCC-C---------eEEEEeeccCCCC
Q 017377 217 VQSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQ--------VQLALERGL-P---------AMIGNFISRQLPY 276 (372)
Q Consensus 217 ~~~VLDIGCG~--G~~~~~L~~~~~~~~~v~gvD~s~~~--------v~~A~~rgl-~---------~~~~~~d~~~lp~ 276 (372)
.++|-=||+|+ +.++..++..| ..|+.+|.+++. ++.+.++|. . ......+..
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG---~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~---- 126 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAG---IETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH---- 126 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG----
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH----
Confidence 36788889885 34555666666 458889999872 223334442 1 011111221
Q ss_pred CCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEE
Q 017377 277 PSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 277 ~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvi 316 (372)
.-...|+|+.+ +.... +-...++.++...++||..++-
T Consensus 127 al~~aDlVIeA-Vpe~~-~vk~~v~~~l~~~~~~~aIlas 164 (460)
T 3k6j_A 127 KLSNCDLIVES-VIEDM-KLKKELFANLENICKSTCIFGT 164 (460)
T ss_dssp GCTTCSEEEEC-CCSCH-HHHHHHHHHHHTTSCTTCEEEE
T ss_pred HHccCCEEEEc-CCCCH-HHHHHHHHHHHhhCCCCCEEEe
Confidence 12457999875 21111 1123578899999999987764
No 434
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=38.82 E-value=37 Score=31.64 Aligned_cols=91 Identities=12% Similarity=0.086 Sum_probs=52.3
Q ss_pred CeEEEeCC--CCcHHHHHHHhc-CCceeEEEEeeCCH----HHHHHHHHcCCCeEEEEeec--cCCC-----C---CCCC
Q 017377 218 QSVLDVGC--GFGSFGAHLVSL-KLMAVCVAVYEATG----SQVQLALERGLPAMIGNFIS--RQLP-----Y---PSLS 280 (372)
Q Consensus 218 ~~VLDIGC--G~G~~~~~L~~~-~~~~~~v~gvD~s~----~~v~~A~~rgl~~~~~~~d~--~~lp-----~---~~~s 280 (372)
.+||=+|+ |.|.++..+++. |. .++++..+. ...+.+++.|....+..-+. .++. . ..+.
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga---~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g 245 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNF---NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 245 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTC---EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCC---EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCC
Confidence 68998886 467788888775 43 344443222 23566677776644321110 1110 0 1246
Q ss_pred ccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 281 FDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 281 FDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
+|+|+-.-. . .... +..++|++||.+++...
T Consensus 246 ~Dvvid~~G------~-~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 246 AKLALNCVG------G-KSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp EEEEEESSC------H-HHHH-HHHHTSCTTCEEEECCC
T ss_pred ceEEEECCC------c-hhHH-HHHHHhccCCEEEEecC
Confidence 999986522 1 1123 66799999999998754
No 435
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=37.92 E-value=34 Score=33.16 Aligned_cols=96 Identities=14% Similarity=0.102 Sum_probs=55.4
Q ss_pred CCeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEee-------------ccCCCC------
Q 017377 217 VQSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI-------------SRQLPY------ 276 (372)
Q Consensus 217 ~~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d-------------~~~lp~------ 276 (372)
+.+|+=+|+|. |..++.++.. ....|+.+|.++...+.+.+.|.. +...+ ...++-
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~--lGa~V~v~D~~~~~l~~~~~~G~~--~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~ 265 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARR--LGAVVSATDVRPAAKEQVASLGAK--FIAVEDEEFKAAETAGGYAKEMSGEYQVKQ 265 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSSTTHHHHHHHTTCE--ECCCCC-----------------CHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHcCCc--eeecccccccccccccchhhhcchhhhhhh
Confidence 47899999985 4444454443 224688899999888888776543 11110 000100
Q ss_pred ----C--CCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEE
Q 017377 277 ----P--SLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 277 ----~--~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis 317 (372)
. -...|+|+.. .+..-...+..+-+++.+.+|||..++=.
T Consensus 266 ~~~l~e~l~~aDVVI~t-vlipg~~ap~Lvt~emv~~Mk~GsVIVDv 311 (405)
T 4dio_A 266 AALVAEHIAKQDIVITT-ALIPGRPAPRLVTREMLDSMKPGSVVVDL 311 (405)
T ss_dssp HHHHHHHHHTCSEEEEC-CCCSSSCCCCCBCHHHHTTSCTTCEEEET
T ss_pred HhHHHHHhcCCCEEEEC-CcCCCCCCCEEecHHHHhcCCCCCEEEEE
Confidence 0 0357999864 21221122222446888899999988754
No 436
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=37.17 E-value=12 Score=35.85 Aligned_cols=99 Identities=13% Similarity=0.049 Sum_probs=53.2
Q ss_pred CCCeEEEeCCCC-cHHHHHHHhc-CCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeec-----------cCCC-------
Q 017377 216 GVQSVLDVGCGF-GSFGAHLVSL-KLMAVCVAVYEATGSQVQLALERGLPAMIGNFIS-----------RQLP------- 275 (372)
Q Consensus 216 ~~~~VLDIGCG~-G~~~~~L~~~-~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~-----------~~lp------- 275 (372)
.+.+|+=+|+|. |..+..++.. | +.|+.+|.++.-.+.+.+.|......+.+. ..++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~G---a~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~ 247 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLG---AVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQ 247 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhh
Confidence 357899999985 4444444443 4 358889999877777766553221000000 0000
Q ss_pred ---CC--CCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 276 ---YP--SLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 276 ---~~--~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
+. -..+|+|+..- ...-.+.+..+..++.+.++|||.++-..
T Consensus 248 ~~~l~~~~~~aDvVi~~~-~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 248 AEAVLKELVKTDIAITTA-LIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp HHHHHHHHTTCSEEEECC-CCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHHHHhCCCCEEEECC-ccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 10 13589999642 11111111112356778899999988655
No 437
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=37.04 E-value=19 Score=22.15 Aligned_cols=25 Identities=12% Similarity=0.017 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHhcccccccc
Q 017377 21 WLLLCFLSIVALIAVLGSSTSNTLD 45 (372)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~ 45 (372)
-|+|-++..|+++..+-.+|-|||.
T Consensus 7 ~malt~i~gl~vif~~lg~tflywr 31 (40)
T 2l9u_A 7 TMALTVIAGLVVIFMMLGGTFLYWR 31 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCceeEEEc
Confidence 4555566777777666667788985
No 438
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=36.01 E-value=66 Score=30.36 Aligned_cols=89 Identities=15% Similarity=0.042 Sum_probs=52.4
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|.=||+|. | .++..|++.+ ..|+++|.++..++.+.+.++... .+..++--.....|+|+..- .- .
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~dr~~~~~~~l~~~g~~~~---~s~~e~~~~a~~~DvVi~~v---p~-~ 92 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKGG---HECVVYDLNVNAVQALEREGIAGA---RSIEEFCAKLVKPRVVWLMV---PA-A 92 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTTTCBCC---SSHHHHHHHSCSSCEEEECS---CG-G
T ss_pred CEEEEECchHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHHCCCEEe---CCHHHHHhcCCCCCEEEEeC---CH-H
Confidence 5688888873 3 2345555555 457889999998888776654321 01000000012359888752 11 1
Q ss_pred cHHHHHHHHHhcccCCeEEEE
Q 017377 296 KEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvi 316 (372)
....++.++...|++|..++-
T Consensus 93 ~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 93 VVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp GHHHHHHHHGGGCCTTCEEEE
T ss_pred HHHHHHHHHHhhCCCCCEEEe
Confidence 445577888888988765543
No 439
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=34.44 E-value=1e+02 Score=27.28 Aligned_cols=85 Identities=15% Similarity=0.105 Sum_probs=49.8
Q ss_pred eEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 219 SVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 219 ~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
+|.=||+|. |. ++..|.+ +. .|+.+|.++...+.+.+.|.... +..+ .-...|+|+..-- ....
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~---~V~~~~~~~~~~~~~~~~g~~~~----~~~~---~~~~~D~vi~~v~---~~~~ 68 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF---PTLVWNRTFEKALRHQEEFGSEA----VPLE---RVAEARVIFTCLP---TTRE 68 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS---CEEEECSSTHHHHHHHHHHCCEE----CCGG---GGGGCSEEEECCS---SHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CC---eEEEEeCCHHHHHHHHHCCCccc----CHHH---HHhCCCEEEEeCC---ChHH
Confidence 466788885 43 4555555 54 46778998887777666554321 1111 0135799887521 1112
Q ss_pred HHHHHHHHHhcccCCeEEEEE
Q 017377 297 EGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 297 ~~~~L~el~rvLkPGG~lvis 317 (372)
...++.++...+++|..++..
T Consensus 69 ~~~v~~~l~~~l~~~~~vv~~ 89 (289)
T 2cvz_A 69 VYEVAEALYPYLREGTYWVDA 89 (289)
T ss_dssp HHHHHHHHTTTCCTTEEEEEC
T ss_pred HHHHHHHHHhhCCCCCEEEEC
Confidence 334677788888888765543
No 440
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=33.73 E-value=19 Score=29.12 Aligned_cols=93 Identities=16% Similarity=0.013 Sum_probs=48.2
Q ss_pred CeEEEeCCCC-cHHH-HHHHhcCCceeEEEEeeCCHHHHHHHH-HcCCCeEEEEeeccC---CC-CCCCCccEEEecccc
Q 017377 218 QSVLDVGCGF-GSFG-AHLVSLKLMAVCVAVYEATGSQVQLAL-ERGLPAMIGNFISRQ---LP-YPSLSFDMVHCAQCG 290 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~-~~L~~~~~~~~~v~gvD~s~~~v~~A~-~rgl~~~~~~~d~~~---lp-~~~~sFDlV~~~~~~ 290 (372)
.+|+=+|+|. |... ..|...+ ..|+.+|.++..++.++ +.+.. ....+... +. ..-..+|+|+..-.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g---~~V~vid~~~~~~~~~~~~~g~~--~~~~d~~~~~~l~~~~~~~ad~Vi~~~~- 93 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG---HSVVVVDKNEYAFHRLNSEFSGF--TVVGDAAEFETLKECGMEKADMVFAFTN- 93 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEESCGGGGGGSCTTCCSE--EEESCTTSHHHHHTTTGGGCSEEEECSS-
T ss_pred CcEEEECCCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHHHhcCCCc--EEEecCCCHHHHHHcCcccCCEEEEEeC-
Confidence 6899999864 3322 2333334 35788899887666554 33432 22222211 10 11245898887522
Q ss_pred ccccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 291 IIWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 291 ~~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
- +.....+.++.+.+.|...++....
T Consensus 94 --~-~~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 94 --D-DSTNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp --C-HHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred --C-cHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 1 2222344455555566666665543
No 441
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=32.84 E-value=55 Score=28.27 Aligned_cols=94 Identities=11% Similarity=-0.024 Sum_probs=55.6
Q ss_pred CeEEEeCCCCcHHHHHHHhcC-CceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC----CCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLK-LMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP----YPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~-~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp----~~~~sFDlV~~~~~~~~ 292 (372)
.+|+=+|+ |.++..+++.- -... ++.+|.++..++.+. .+..+. .+|..+.. ..-...|+|++...
T Consensus 10 ~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i--~gd~~~~~~l~~a~i~~ad~vi~~~~--- 80 (234)
T 2aef_A 10 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFV--HGDPTRVSDLEKANVRGARAVIVDLE--- 80 (234)
T ss_dssp CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEE--ESCTTCHHHHHHTTCTTCSEEEECCS---
T ss_pred CEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEE--EcCCCCHHHHHhcCcchhcEEEEcCC---
Confidence 56888887 57777776542 1245 888999998887776 554443 33433211 11246788887521
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.+.....+....+-+.|+..++......
T Consensus 81 -~d~~n~~~~~~a~~~~~~~~iia~~~~~ 108 (234)
T 2aef_A 81 -SDSETIHCILGIRKIDESVRIIAEAERY 108 (234)
T ss_dssp -CHHHHHHHHHHHHHHCSSSEEEEECSSG
T ss_pred -CcHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 1122234556667788887777665443
No 442
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=32.47 E-value=2.5e+02 Score=24.33 Aligned_cols=101 Identities=17% Similarity=0.096 Sum_probs=57.3
Q ss_pred CeEEEeCCCCcH---HHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-CCCeEEEEeeccCCCC----------CCCCccE
Q 017377 218 QSVLDVGCGFGS---FGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAMIGNFISRQLPY----------PSLSFDM 283 (372)
Q Consensus 218 ~~VLDIGCG~G~---~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-gl~~~~~~~d~~~lp~----------~~~sFDl 283 (372)
+++|=.|++.|. ++..|+++| ..|+.+|.++..++...+. +..+.....|..+..- .-+..|+
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGG---AEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 678989987663 344455555 3577788888777654432 4445555555433210 0136898
Q ss_pred EEecccccccc-------ccHH-----------HHHHHHHhcccCCeEEEEEeCCC
Q 017377 284 VHCAQCGIIWD-------KKEG-----------IFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 284 V~~~~~~~~~~-------~~~~-----------~~L~el~rvLkPGG~lvis~p~~ 321 (372)
++.+....... ++.. .+.+.+.+.++.+|.++......
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 141 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVA 141 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGG
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChh
Confidence 88764433221 1111 23455667777889888765543
No 443
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=32.09 E-value=47 Score=30.09 Aligned_cols=86 Identities=17% Similarity=0.186 Sum_probs=50.9
Q ss_pred CeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|.=||+|. |. ++..|++.+. .|+++|.++..++.+.+.++.. . .+..++ -. .|+|+..- .-..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~---~V~~~dr~~~~~~~~~~~g~~~--~-~~~~~~---~~-aDvvi~~v---p~~~ 82 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG---GVTVYDIRIEAMTPLAEAGATL--A-DSVADV---AA-ADLIHITV---LDDA 82 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT---CEEEECSSTTTSHHHHHTTCEE--C-SSHHHH---TT-SSEEEECC---SSHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC---eEEEEeCCHHHHHHHHHCCCEE--c-CCHHHH---Hh-CCEEEEEC---CChH
Confidence 4688889885 33 4555555554 4778899988887777766421 1 111111 12 68888651 1112
Q ss_pred cHHHHHHHHHhcccCCeEEEE
Q 017377 296 KEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 296 ~~~~~L~el~rvLkPGG~lvi 316 (372)
....++.++...++||..++-
T Consensus 83 ~~~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 83 QVREVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp HHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEE
Confidence 234567788888888766553
No 444
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=31.21 E-value=75 Score=28.55 Aligned_cols=86 Identities=16% Similarity=0.199 Sum_probs=48.7
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|.=||+|. | .++..|++.+. .|+.+|.++..++.+.+.++... .+..+. -...|+|+..- .-..
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~---~V~~~d~~~~~~~~~~~~g~~~~---~~~~~~---~~~aDvvi~~v---p~~~ 71 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY---LLNVFDLVQSAVDGLVAAGASAA---RSARDA---VQGADVVISML---PASQ 71 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC---EEEEECSSHHHHHHHHHTTCEEC---SSHHHH---HTTCSEEEECC---SCHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC---eEEEEcCCHHHHHHHHHCCCeEc---CCHHHH---HhCCCeEEEEC---CCHH
Confidence 5688889985 3 34556666653 57889999998888877664210 011000 12358877641 1111
Q ss_pred cHHHHHH---HHHhcccCCeEEE
Q 017377 296 KEGIFLI---EADRLLKPGGYFV 315 (372)
Q Consensus 296 ~~~~~L~---el~rvLkPGG~lv 315 (372)
....++. ++...+++|..++
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi 94 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVL 94 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEE
T ss_pred HHHHHHcCchhHHhcCCCCcEEE
Confidence 2233454 5666677766544
No 445
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=30.09 E-value=1.4e+02 Score=33.61 Aligned_cols=48 Identities=15% Similarity=0.054 Sum_probs=37.3
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEE
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMI 266 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~ 266 (372)
.+++|+=||.|.++.-+...|+. -.+.++|+++.+++.-+.+.....+
T Consensus 852 l~viDLFsG~GGlslGfe~AG~~-~vv~avEid~~A~~ty~~N~p~~~~ 899 (1330)
T 3av4_A 852 LRTLDVFSGCGGLSEGFHQAGIS-ETLWAIEMWDPAAQAFRLNNPGTTV 899 (1330)
T ss_dssp EEEEEETCTTSHHHHHHHHTTSE-EEEEEECCSHHHHHHHHHHCTTSEE
T ss_pred ceEEecccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhCCCCcE
Confidence 58999999999999998887752 3477899999998876666444333
No 446
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=29.38 E-value=64 Score=28.95 Aligned_cols=89 Identities=17% Similarity=0.105 Sum_probs=50.8
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-------------CCC----------eEEEEeecc
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALER-------------GLP----------AMIGNFISR 272 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-------------gl~----------~~~~~~d~~ 272 (372)
++|.=||+|. | .++..++..| ..|+.+|.+++.++.+.+. ++. +... .+..
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G---~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~ 80 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG---FAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS-DDLA 80 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE-SCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe-CCHH
Confidence 5677788874 2 2344445555 4578899999988776654 211 1111 1111
Q ss_pred CCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEE
Q 017377 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFV 315 (372)
Q Consensus 273 ~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lv 315 (372)
+ .-...|+|+.+-. ... +....++.++...++|+..++
T Consensus 81 ~---~~~~aDlVi~av~-~~~-~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 81 Q---AVKDADLVIEAVP-ESL-DLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp H---HTTTCSEEEECCC-SCH-HHHHHHHHHHHHHSCTTCEEE
T ss_pred H---HhccCCEEEEecc-CcH-HHHHHHHHHHHhhCCCCcEEE
Confidence 1 0135799887521 111 123457888999999887665
No 447
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=29.09 E-value=1.1e+02 Score=27.97 Aligned_cols=93 Identities=13% Similarity=0.184 Sum_probs=51.9
Q ss_pred CeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-CCCeE------EEEe--eccCCCCCCCCccEEEe
Q 017377 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAM------IGNF--ISRQLPYPSLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-gl~~~------~~~~--d~~~lp~~~~sFDlV~~ 286 (372)
.+|.=||+|. |. ++..|++.+ ..|+.+|.++..++...+. ++... .... ...+..-.-..+|+|+.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKG---QSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCC---CEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 4688889875 33 444555555 3578889999888777665 32110 0000 00011000135898887
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEE
Q 017377 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 287 ~~~~~~~~~~~~~~L~el~rvLkPGG~lvis 317 (372)
.-- . .....++.++...+++|..++..
T Consensus 82 ~v~--~--~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 82 VVP--A--IHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp CSC--G--GGHHHHHHHHGGGCCTTCEEEES
T ss_pred eCC--c--hHHHHHHHHHHHhCCCCCEEEEc
Confidence 522 1 12245788888899987754443
No 448
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=28.74 E-value=1.2e+02 Score=30.09 Aligned_cols=85 Identities=13% Similarity=0.057 Sum_probs=51.2
Q ss_pred CeEEEeCCCCcHHHHHH----HhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccc
Q 017377 218 QSVLDVGCGFGSFGAHL----VSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L----~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~ 293 (372)
++|+=+|+| | .+..+ +..| +.|+.+|.++...+.+...+.. . .+... ....+|+|+......+.
T Consensus 266 KtVvVtGaG-g-IG~aiA~~Laa~G---A~Viv~D~~~~~a~~Aa~~g~d--v--~~lee---~~~~aDvVi~atG~~~v 333 (488)
T 3ond_A 266 KVAVVAGYG-D-VGKGCAAALKQAG---ARVIVTEIDPICALQATMEGLQ--V--LTLED---VVSEADIFVTTTGNKDI 333 (488)
T ss_dssp CEEEEECCS-H-HHHHHHHHHHHTT---CEEEEECSCHHHHHHHHHTTCE--E--CCGGG---TTTTCSEEEECSSCSCS
T ss_pred CEEEEECCC-H-HHHHHHHHHHHCC---CEEEEEcCCHHHHHHHHHhCCc--c--CCHHH---HHHhcCEEEeCCCChhh
Confidence 788889988 3 33333 3334 4677889999877777766642 1 12222 12468988865433333
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+-.+..+.+++|+.++-....
T Consensus 334 ------l~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 334 ------IMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp ------BCHHHHTTSCTTEEEEESSST
T ss_pred ------hhHHHHHhcCCCeEEEEcCCC
Confidence 123356778999987766543
No 449
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=28.22 E-value=1.5e+02 Score=27.45 Aligned_cols=93 Identities=13% Similarity=0.117 Sum_probs=56.6
Q ss_pred CeEEEeCCC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeecc---CC-CCC-CCCccEEEeccccc
Q 017377 218 QSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISR---QL-PYP-SLSFDMVHCAQCGI 291 (372)
Q Consensus 218 ~~VLDIGCG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~---~l-p~~-~~sFDlV~~~~~~~ 291 (372)
.+||=+|+| .|.++..+++.. ....|+++|.++.-.+.+++.|....+. .... .+ ... ...+|+|+-.-.
T Consensus 188 ~~VlV~GaG~vG~~avqlak~~-~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~v~~~~~g~g~Dvvid~~G-- 263 (359)
T 1h2b_A 188 AYVAIVGVGGLGHIAVQLLKVM-TPATVIALDVKEEKLKLAERLGADHVVD-ARRDPVKQVMELTRGRGVNVAMDFVG-- 263 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESSHHHHHHHHHTTCSEEEE-TTSCHHHHHHHHTTTCCEEEEEESSC--
T ss_pred CEEEEECCCHHHHHHHHHHHHc-CCCeEEEEeCCHHHHHHHHHhCCCEEEe-ccchHHHHHHHHhCCCCCcEEEECCC--
Confidence 789999875 355666666541 0346889999999999999888654432 1110 00 011 236999986532
Q ss_pred cccccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 292 IWDKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 292 ~~~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
......+....+. +||.+++...
T Consensus 264 ---~~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 264 ---SQATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp ---CHHHHHHGGGGEE--EEEEEEECCC
T ss_pred ---CchHHHHHHHhhc--CCCEEEEEeC
Confidence 1101144555566 9999988764
No 450
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=28.18 E-value=83 Score=28.49 Aligned_cols=89 Identities=16% Similarity=0.031 Sum_probs=49.6
Q ss_pred CCeEEEeCCCC-cHHHHHH-HhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 217 VQSVLDVGCGF-GSFGAHL-VSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 217 ~~~VLDIGCG~-G~~~~~L-~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.++|+=||+|. |...+.. ...+ +.|+++|.++...+.+.+.+.. .... ..+.-.-...|+|+..-. .++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~d~~~~~~~~~~~~g~~--~~~~--~~l~~~l~~aDvVi~~~p-~~~i 228 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALG---ANVKVGARSSAHLARITEMGLV--PFHT--DELKEHVKDIDICINTIP-SMIL 228 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHTTCE--EEEG--GGHHHHSTTCSEEEECCS-SCCB
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHHCCCe--EEch--hhHHHHhhCCCEEEECCC-hhhh
Confidence 37899999864 2222222 2233 4688899998766655554432 2111 111101246899988633 2332
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 295 KKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 295 ~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
. .+....++||++++-...
T Consensus 229 ~------~~~~~~mk~g~~lin~a~ 247 (300)
T 2rir_A 229 N------QTVLSSMTPKTLILDLAS 247 (300)
T ss_dssp C------HHHHTTSCTTCEEEECSS
T ss_pred C------HHHHHhCCCCCEEEEEeC
Confidence 2 134567899988776554
No 451
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=27.64 E-value=3.2e+02 Score=26.74 Aligned_cols=89 Identities=16% Similarity=0.156 Sum_probs=52.5
Q ss_pred CeEEEeCCCC--cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHH-----------cCC-C----------eEEEEeeccC
Q 017377 218 QSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALE-----------RGL-P----------AMIGNFISRQ 273 (372)
Q Consensus 218 ~~VLDIGCG~--G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~-----------rgl-~----------~~~~~~d~~~ 273 (372)
++|-=||+|. +.++..++..|. .|+.+|.+++.++.+.+ +|. . +.. ..+..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~---~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~- 80 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH---QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIH- 80 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC---CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGG-
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHH-
Confidence 4566678875 234555666664 47889999999887764 222 1 111 11111
Q ss_pred CCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEE
Q 017377 274 LPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 274 lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvi 316 (372)
.-...|+|+.+ +.... +-...++.++...++|+..++.
T Consensus 81 ---~~~~aDlVIeA-Vpe~~-~vk~~v~~~l~~~~~~~~Ilas 118 (483)
T 3mog_A 81 ---ALAAADLVIEA-ASERL-EVKKALFAQLAEVCPPQTLLTT 118 (483)
T ss_dssp ---GGGGCSEEEEC-CCCCH-HHHHHHHHHHHHHSCTTCEEEE
T ss_pred ---HhcCCCEEEEc-CCCcH-HHHHHHHHHHHHhhccCcEEEe
Confidence 12357888865 21111 1123588999999999987754
No 452
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=27.41 E-value=61 Score=29.91 Aligned_cols=95 Identities=19% Similarity=0.113 Sum_probs=52.2
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEE------EEeeccCCCCCCCCccEEEeccc
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMI------GNFISRQLPYPSLSFDMVHCAQC 289 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~------~~~d~~~lp~~~~sFDlV~~~~~ 289 (372)
.+|.=||+|. | .++..|++.+. .|+.+|.+ ..++..++.|+.... ........+-.-..+|+|+..--
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~---~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vilavk 79 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGE---AINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAALGEQDVVIVAVK 79 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTC---CEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHHCCCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---EEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHcCCCCEEEEeCC
Confidence 5688899884 3 34555555553 46677874 556666666654321 00000000001145899887511
Q ss_pred cccccccHHHHHHHHHhcccCCeEEEEEeCC
Q 017377 290 GIIWDKKEGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 290 ~~~~~~~~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
. .....++.++...++|+..++.....
T Consensus 80 --~--~~~~~~~~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 80 --A--PALESVAAGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp --H--HHHHHHHGGGSSSCCTTCEEEECCSS
T ss_pred --c--hhHHHHHHHHHhhCCCCCEEEEECCC
Confidence 1 22345777777888888766654444
No 453
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=27.38 E-value=30 Score=26.64 Aligned_cols=53 Identities=19% Similarity=0.110 Sum_probs=34.3
Q ss_pred eEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEec
Q 017377 219 SVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCA 287 (372)
Q Consensus 219 ~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~ 287 (372)
+|| +-||.|..+..+++ .+-+.++++|+++.+...+.....-....+|+|+..
T Consensus 5 kIl-l~Cg~G~sTS~l~~---------------k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~ 57 (106)
T 1e2b_A 5 HIY-LFSSAGMSTSLLVS---------------KMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLG 57 (106)
T ss_dssp EEE-EECSSSTTTHHHHH---------------HHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEEC
T ss_pred EEE-EECCCchhHHHHHH---------------HHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEc
Confidence 455 66888877665543 334577788998776655555443222568999876
No 454
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=27.33 E-value=1.1e+02 Score=25.90 Aligned_cols=92 Identities=9% Similarity=-0.122 Sum_probs=49.7
Q ss_pred EEEeCCCCcHHHHHHHhcC-CceeEEEEeeCCHHHHHHHHH-cCCCeEEEEeeccCCC----CCCCCccEEEeccccccc
Q 017377 220 VLDVGCGFGSFGAHLVSLK-LMAVCVAVYEATGSQVQLALE-RGLPAMIGNFISRQLP----YPSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 220 VLDIGCG~G~~~~~L~~~~-~~~~~v~gvD~s~~~v~~A~~-rgl~~~~~~~d~~~lp----~~~~sFDlV~~~~~~~~~ 293 (372)
|+=+|+ |.+|..+++.- -....++.+|.++..++...+ .+..+.. +|..+.. ..-...|+|++...
T Consensus 3 iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~--gd~~~~~~l~~a~i~~ad~vi~~~~---- 74 (218)
T 3l4b_C 3 VIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIH--GDGSHKEILRDAEVSKNDVVVILTP---- 74 (218)
T ss_dssp EEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEE--SCTTSHHHHHHHTCCTTCEEEECCS----
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEE--cCCCCHHHHHhcCcccCCEEEEecC----
Confidence 555665 66666655430 012457889999998876543 3544433 3333211 11246898887522
Q ss_pred cccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 294 DKKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 294 ~~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.+.....+....+-+.|...++....
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEECCC
T ss_pred CcHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 12223355566666667777665443
No 455
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=27.26 E-value=88 Score=28.26 Aligned_cols=89 Identities=12% Similarity=-0.002 Sum_probs=49.1
Q ss_pred CCeEEEeCCCC-cHHHHHHH-hcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 217 VQSVLDVGCGF-GSFGAHLV-SLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 217 ~~~VLDIGCG~-G~~~~~L~-~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.++|+=||+|. |...+..+ ..| +.|+++|.++...+.+.+.+.. .... ..+.-.-...|+|+..-. .++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~dr~~~~~~~~~~~g~~--~~~~--~~l~~~l~~aDvVi~~~p-~~~i 226 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALG---AKVKVGARESDLLARIAEMGME--PFHI--SKAAQELRDVDVCINTIP-ALVV 226 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEESSHHHHHHHHHTTSE--EEEG--GGHHHHTTTCSEEEECCS-SCCB
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHHCCCe--ecCh--hhHHHHhcCCCEEEECCC-hHHh
Confidence 37899999874 32222222 234 4688899998776666555532 2211 111101146899987632 2332
Q ss_pred ccHHHHHHHHHhcccCCeEEEEEeC
Q 017377 295 KKEGIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 295 ~~~~~~L~el~rvLkPGG~lvis~p 319 (372)
.. +....++||++++-...
T Consensus 227 ~~------~~l~~mk~~~~lin~ar 245 (293)
T 3d4o_A 227 TA------NVLAEMPSHTFVIDLAS 245 (293)
T ss_dssp CH------HHHHHSCTTCEEEECSS
T ss_pred CH------HHHHhcCCCCEEEEecC
Confidence 21 23456899998776554
No 456
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=27.11 E-value=85 Score=30.85 Aligned_cols=96 Identities=15% Similarity=0.076 Sum_probs=54.2
Q ss_pred CCeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEee--------ccCCCCC------CCC
Q 017377 217 VQSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFI--------SRQLPYP------SLS 280 (372)
Q Consensus 217 ~~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d--------~~~lp~~------~~s 280 (372)
..+|.=||+|. |. ++..|++.| ..|+++|.++..++...+.+.+......+ ...+.+. -..
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G---~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG---HDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCC---CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 36788899984 54 455566655 35889999999998877654322100000 0001110 124
Q ss_pred ccEEEeccccccc----c---ccHHHHHHHHHhcccCCeEEEE
Q 017377 281 FDMVHCAQCGIIW----D---KKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 281 FDlV~~~~~~~~~----~---~~~~~~L~el~rvLkPGG~lvi 316 (372)
.|+|+..-- ... . .....++.++...|+||-.++.
T Consensus 85 aDvviiaVp-tp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~ 126 (478)
T 2y0c_A 85 GDVQFIAVG-TPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD 126 (478)
T ss_dssp CSEEEECCC-CCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEeC-CCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE
Confidence 688876511 100 0 2234577888899998776544
No 457
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=26.91 E-value=50 Score=30.60 Aligned_cols=44 Identities=16% Similarity=0.174 Sum_probs=30.4
Q ss_pred CCccEEEec----ccccccc--ccHH----HHHHHHHhcccCCeEEEEEeCCCC
Q 017377 279 LSFDMVHCA----QCGIIWD--KKEG----IFLIEADRLLKPGGYFVLTSPESK 322 (372)
Q Consensus 279 ~sFDlV~~~----~~~~~~~--~~~~----~~L~el~rvLkPGG~lvis~p~~~ 322 (372)
+.+|+|++. ...+|+. .|.. .++.-...+|+|||.|++-.....
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 679999985 2223322 2222 256678899999999999988654
No 458
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=26.49 E-value=1.1e+02 Score=27.66 Aligned_cols=92 Identities=17% Similarity=0.134 Sum_probs=50.4
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEE--Eeec-----cCCCCCCCCccEEEecc
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIG--NFIS-----RQLPYPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~--~~d~-----~~lp~~~~sFDlV~~~~ 288 (372)
.+|+=||+|. | .++..|++.+. .|+.++-++ .+..++.|+..... .... ...+-....+|+|+..-
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~---~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilav 77 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE---DVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGL 77 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC---CEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC---eEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEec
Confidence 3577788885 3 35566666653 466677765 36666666543210 0000 00000114689998752
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
=..+ ...++.++...+.|+..++...
T Consensus 78 k~~~----~~~~l~~l~~~l~~~~~iv~l~ 103 (312)
T 3hn2_A 78 KTFA----NSRYEELIRPLVEEGTQILTLQ 103 (312)
T ss_dssp CGGG----GGGHHHHHGGGCCTTCEEEECC
T ss_pred CCCC----cHHHHHHHHhhcCCCCEEEEec
Confidence 1111 2247888999999887655443
No 459
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=26.16 E-value=1e+02 Score=28.25 Aligned_cols=94 Identities=13% Similarity=0.027 Sum_probs=56.7
Q ss_pred CeEEEeCCCCcHHHHHHHhcC-CceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC----CCCCCccEEEecccccc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLK-LMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP----YPSLSFDMVHCAQCGII 292 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~-~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp----~~~~sFDlV~~~~~~~~ 292 (372)
.+|+=+|+ |.++..+++.- -... ++.+|.+++.++ +++.+..+..+ |..+.. ..-...|.|++...
T Consensus 116 ~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~g--d~~~~~~L~~a~i~~a~~vi~~~~--- 186 (336)
T 1lnq_A 116 RHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHG--DPTRVSDLEKANVRGARAVIVDLE--- 186 (336)
T ss_dssp CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEES--CTTSHHHHHHTCSTTEEEEEECCS---
T ss_pred CCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEe--CCCCHHHHHhcChhhccEEEEcCC---
Confidence 46777776 67777777641 1235 888999999998 77766655554 332211 12346788887521
Q ss_pred ccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 293 WDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 293 ~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.++.........+-+.|...++......
T Consensus 187 -~d~~n~~~~~~ar~~~~~~~iiar~~~~ 214 (336)
T 1lnq_A 187 -SDSETIHCILGIRKIDESVRIIAEAERY 214 (336)
T ss_dssp -SHHHHHHHHHHHHTTCTTSEEEEECSSG
T ss_pred -ccHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 1222234555667788887777665443
No 460
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=25.66 E-value=4e+02 Score=24.64 Aligned_cols=102 Identities=9% Similarity=-0.032 Sum_probs=56.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHH---Hc------------------------CCCeEEEEee
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLAL---ER------------------------GLPAMIGNFI 270 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~---~r------------------------gl~~~~~~~d 270 (372)
..|+-+|||.=+..-.|...+.....+.-+|.-+.+-...+ +. .-.......|
T Consensus 92 ~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~D 171 (334)
T 3iei_A 92 CQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGAD 171 (334)
T ss_dssp SEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEECC
T ss_pred CEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEccc
Confidence 68999999999888888765323345666776443321111 10 1122333344
Q ss_pred ccCC----------CCCCCCccEEEeccccccccccH-HHHHHHHHhcccCCeEEEEEeCC
Q 017377 271 SRQL----------PYPSLSFDMVHCAQCGIIWDKKE-GIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 271 ~~~l----------p~~~~sFDlV~~~~~~~~~~~~~-~~~L~el~rvLkPGG~lvis~p~ 320 (372)
..+. .+....--++++..++..+.++. ..+|..+.... |+|.+++.++.
T Consensus 172 L~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i 231 (334)
T 3iei_A 172 LRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQV 231 (334)
T ss_dssp TTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred cccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEecc
Confidence 4331 24444555777776666665433 35666666655 56666665554
No 461
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=25.27 E-value=3.2e+02 Score=24.31 Aligned_cols=37 Identities=16% Similarity=0.241 Sum_probs=26.6
Q ss_pred CeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHH
Q 017377 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLA 257 (372)
Q Consensus 218 ~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A 257 (372)
++|.=||+|. |. ++..++..| ..|+.+|.+++.++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G---~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG---HTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEECCHHHHHHH
Confidence 5688899985 33 555666665 3578899999887764
No 462
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=25.26 E-value=1.2e+02 Score=27.69 Aligned_cols=86 Identities=15% Similarity=0.050 Sum_probs=48.0
Q ss_pred CeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCH-------HHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecc
Q 017377 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATG-------SQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~-------~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~ 288 (372)
.+|.=||+|. |. ++..|++.|. ..|+++|.++ ..++.+.+.|. .. .+..+. -..-|+|+..-
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~--~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~-~s~~e~---~~~aDvVi~av 95 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNA--ARLAAYDLRFNDPAASGALRARAAELGV---EP-LDDVAG---IACADVVLSLV 95 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC--SEEEEECGGGGCTTTHHHHHHHHHHTTC---EE-ESSGGG---GGGCSEEEECC
T ss_pred CeEEEECccHHHHHHHHHHHHcCC--CeEEEEeCCCccccchHHHHHHHHHCCC---CC-CCHHHH---HhcCCEEEEec
Confidence 5688888873 32 3444555551 3577889887 55666666665 11 011111 13468888751
Q ss_pred ccccccccHHHHHHHHHhcccCCeEEEE
Q 017377 289 CGIIWDKKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 289 ~~~~~~~~~~~~L~el~rvLkPGG~lvi 316 (372)
.- ......+.++...|+||..++-
T Consensus 96 ---p~-~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 96 ---VG-AATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp ---CG-GGHHHHHHHHGGGCCTTCEEEE
T ss_pred ---CC-HHHHHHHHHHHhhcCCCCEEEE
Confidence 11 2223356778888888765543
No 463
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=24.95 E-value=74 Score=28.45 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=49.1
Q ss_pred CeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|.=||+|. |. ++..|.+.+. .|+.+|.++..++...+.|+.. . .+..+. -...|+|+..- ....
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~---~V~~~~~~~~~~~~~~~~g~~~--~-~~~~~~---~~~~D~vi~~v---~~~~ 73 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGY---SLVVSDRNPEAIADVIAAGAET--A-STAKAI---AEQCDVIITML---PNSP 73 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC---EEEEECSCHHHHHHHHHTTCEE--C-SSHHHH---HHHCSEEEECC---SSHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCC---EEEEEeCCHHHHHHHHHCCCee--c-CCHHHH---HhCCCEEEEEC---CCHH
Confidence 3688899985 43 4455555553 5778899999888777765421 0 011000 12468888652 1111
Q ss_pred cHHHHH---HHHHhcccCCeEEE
Q 017377 296 KEGIFL---IEADRLLKPGGYFV 315 (372)
Q Consensus 296 ~~~~~L---~el~rvLkPGG~lv 315 (372)
....++ .++...++||..++
T Consensus 74 ~~~~~~~~~~~l~~~l~~~~~vv 96 (299)
T 1vpd_A 74 HVKEVALGENGIIEGAKPGTVLI 96 (299)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEE
T ss_pred HHHHHHhCcchHhhcCCCCCEEE
Confidence 223355 46677788887654
No 464
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=24.69 E-value=17 Score=34.21 Aligned_cols=65 Identities=17% Similarity=0.076 Sum_probs=36.6
Q ss_pred CCeEEEeCCC-CcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCC---CCCCCccEEEec
Q 017377 217 VQSVLDVGCG-FGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLP---YPSLSFDMVHCA 287 (372)
Q Consensus 217 ~~~VLDIGCG-~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp---~~~~sFDlV~~~ 287 (372)
..+||=+||| +|...+..+... ..++..|.+...++.+.+.. ....+|..+.. -.-...|+|++.
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~---~~v~~~~~~~~~~~~~~~~~---~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE---FDVYIGDVNNENLEKVKEFA---TPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT---SEEEEEESCHHHHHHHTTTS---EEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred ccEEEEECCCHHHHHHHHHHhcC---CCeEEEEcCHHHHHHHhccC---CcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 3689999996 344444333333 45777899998887775432 22223332211 001357888875
No 465
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=24.21 E-value=2.8e+02 Score=25.04 Aligned_cols=95 Identities=18% Similarity=0.105 Sum_probs=52.1
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEE------E--Eeec-cCCCCCCCCccEEEe
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMI------G--NFIS-RQLPYPSLSFDMVHC 286 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~------~--~~d~-~~lp~~~~sFDlV~~ 286 (372)
.+|+=||+|. | .++..|++.+ ..|+.++-++ .+..++.|+...- . .... ....-....+|+|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTG---HCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTT---CEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 4677788884 3 3455555555 3567777776 2555555542211 0 0000 011111236899987
Q ss_pred ccccccccccHHHHHHHHHhcccCCeEEEEEeCCC
Q 017377 287 AQCGIIWDKKEGIFLIEADRLLKPGGYFVLTSPES 321 (372)
Q Consensus 287 ~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~p~~ 321 (372)
.-=..+. ..++.++...+.|+..++......
T Consensus 78 avK~~~~----~~~l~~l~~~l~~~t~Iv~~~nGi 108 (320)
T 3i83_A 78 CIKVVEG----ADRVGLLRDAVAPDTGIVLISNGI 108 (320)
T ss_dssp CCCCCTT----CCHHHHHTTSCCTTCEEEEECSSS
T ss_pred ecCCCCh----HHHHHHHHhhcCCCCEEEEeCCCC
Confidence 5221222 237888999999988766654443
No 466
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=23.60 E-value=3.8e+02 Score=24.50 Aligned_cols=87 Identities=17% Similarity=0.141 Sum_probs=52.3
Q ss_pred CeEEEeCCCC--cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHH-----------cCCC------------eEEEEeecc
Q 017377 218 QSVLDVGCGF--GSFGAHLVSLKLMAVCVAVYEATGSQVQLALE-----------RGLP------------AMIGNFISR 272 (372)
Q Consensus 218 ~~VLDIGCG~--G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~-----------rgl~------------~~~~~~d~~ 272 (372)
++|-=||+|+ +.++..++..|. .|+.+|.+++.++.+.+ .|+- +... .+..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~---~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ 82 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF---RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLA 82 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC---EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHH
Confidence 5677888885 345566666664 47889999998887754 2311 1111 1111
Q ss_pred CCCCCCCCccEEEecccccccccc---HHHHHHHHHhcccCCeEEEE
Q 017377 273 QLPYPSLSFDMVHCAQCGIIWDKK---EGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 273 ~lp~~~~sFDlV~~~~~~~~~~~~---~~~~L~el~rvLkPGG~lvi 316 (372)
. .-...|+|+.+ + +++ ...++.++...++||-.++-
T Consensus 83 e---av~~aDlViea-v----pe~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 83 E---AVEGVVHIQEC-V----PENLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp H---HTTTEEEEEEC-C----CSCHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred H---HHhcCCEEEEe-c----cCCHHHHHHHHHHHHhhCCCCeEEEE
Confidence 0 01356888865 1 222 23578889999998886653
No 467
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=23.39 E-value=1.2e+02 Score=27.04 Aligned_cols=92 Identities=15% Similarity=0.094 Sum_probs=50.7
Q ss_pred CeEEEeCCCC-cH-HHHHHHhc-----CCceeEEEEeeCCHHHHHHHHH-cCCCeEEEEee-------ccCCCCCCCCcc
Q 017377 218 QSVLDVGCGF-GS-FGAHLVSL-----KLMAVCVAVYEATGSQVQLALE-RGLPAMIGNFI-------SRQLPYPSLSFD 282 (372)
Q Consensus 218 ~~VLDIGCG~-G~-~~~~L~~~-----~~~~~~v~gvD~s~~~v~~A~~-rgl~~~~~~~d-------~~~lp~~~~sFD 282 (372)
.+|.=||+|. |. ++..|++. +. ..|+.+|. +..++...+ .|+.+.....+ ....+-....+|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~--~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGL--LEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSS--EEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCC--CCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 4788899984 43 34455544 30 46778888 666776666 56432210000 000000124689
Q ss_pred EEEeccccccccccHHHHHHHHHhcccCCeEEEE
Q 017377 283 MVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 283 lV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvi 316 (372)
+|+..-- . .....++.++...++|+..++.
T Consensus 86 ~vil~vk--~--~~~~~v~~~i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 86 YILFCTK--D--YDMERGVAEIRPMIGQNTKILP 115 (317)
T ss_dssp EEEECCS--S--SCHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEEecC--c--ccHHHHHHHHHhhcCCCCEEEE
Confidence 9887521 1 2235578888888887765444
No 468
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=23.03 E-value=20 Score=34.65 Aligned_cols=97 Identities=12% Similarity=0.107 Sum_probs=53.0
Q ss_pred CCeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeecc-----------------------
Q 017377 217 VQSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISR----------------------- 272 (372)
Q Consensus 217 ~~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~----------------------- 272 (372)
+.+|+=+|+|. |..+..++.. ..+.|+.+|.++.-.+.+.+.|.. +...+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~--~Ga~V~v~D~~~~~~~~~~~lGa~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 247 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANS--LGAIVRAFDTRPEVKEQVQSMGAE--FLELDFKEEAGSGDGYAKVMSDAFIKAEME 247 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCGGGHHHHHHTTCE--ECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHcCCE--EEEecccccccccccchhhccHHHHHHHHH
Confidence 47899999985 4444444443 124688899998877777665533 2111100
Q ss_pred CCCCCCCCccEEEeccccccccccHHHHHHHHHhcccCCeEEEEEe
Q 017377 273 QLPYPSLSFDMVHCAQCGIIWDKKEGIFLIEADRLLKPGGYFVLTS 318 (372)
Q Consensus 273 ~lp~~~~sFDlV~~~~~~~~~~~~~~~~L~el~rvLkPGG~lvis~ 318 (372)
.+.-.-...|+|+.. +...-...+..+-.++.+.++|||.++-..
T Consensus 248 ~l~e~~~~aDvVI~~-~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 248 LFAAQAKEVDIIVTT-ALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHCSEEEEC-CCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHhCCCCEEEEC-CccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 010001247999875 212110111112246777899999988654
No 469
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=23.01 E-value=1.2e+02 Score=27.73 Aligned_cols=88 Identities=17% Similarity=0.161 Sum_probs=49.6
Q ss_pred CeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEeccccccccc
Q 017377 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDK 295 (372)
Q Consensus 218 ~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~ 295 (372)
.+|.=||+|. |. ++..|++.+ ..|+++|.++..++...+.|+.. . .+..+. -...|+|+..- .-..
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~dr~~~~~~~l~~~g~~~--~-~~~~e~---~~~aDvVi~~v---p~~~ 99 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAG---YALQVWNRTPARAASLAALGATI--H-EQARAA---ARDADIVVSML---ENGA 99 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTTTCEE--E-SSHHHH---HTTCSEEEECC---SSHH
T ss_pred CEEEEECccHHHHHHHHHHHhCC---CeEEEEcCCHHHHHHHHHCCCEe--e-CCHHHH---HhcCCEEEEEC---CCHH
Confidence 5788899984 43 455566665 35788999999888877665421 1 111111 12358887641 1111
Q ss_pred cHHHHHH--HHHhcccCCeEEEEE
Q 017377 296 KEGIFLI--EADRLLKPGGYFVLT 317 (372)
Q Consensus 296 ~~~~~L~--el~rvLkPGG~lvis 317 (372)
....++. ++...+++|..++-.
T Consensus 100 ~~~~v~~~~~~~~~l~~~~~vi~~ 123 (320)
T 4dll_A 100 VVQDVLFAQGVAAAMKPGSLFLDM 123 (320)
T ss_dssp HHHHHHTTTCHHHHCCTTCEEEEC
T ss_pred HHHHHHcchhHHhhCCCCCEEEec
Confidence 2233444 556667777655433
No 470
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=22.67 E-value=1.1e+02 Score=27.48 Aligned_cols=89 Identities=16% Similarity=0.119 Sum_probs=51.9
Q ss_pred CeEEEeCCCC-c-HHHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-CCCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 218 QSVLDVGCGF-G-SFGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 218 ~~VLDIGCG~-G-~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.+|.=||||. | .++..|++.+.....|+.+|.++..++.+.+. ++.. . .+.... -...|+|+..- . +
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~--~-~~~~~~---~~~aDvVilav---~-p 73 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHT--T-QDNRQG---ALNADVVVLAV---K-P 73 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEE--E-SCHHHH---HSSCSEEEECS---C-G
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEE--e-CChHHH---HhcCCeEEEEe---C-H
Confidence 4677889974 2 34555566664333577889998888877665 5422 1 011110 13468888752 1 1
Q ss_pred ccHHHHHHHHHhc-ccCCeEEEEE
Q 017377 295 KKEGIFLIEADRL-LKPGGYFVLT 317 (372)
Q Consensus 295 ~~~~~~L~el~rv-LkPGG~lvis 317 (372)
.....++.++... ++++-. +++
T Consensus 74 ~~~~~vl~~l~~~~l~~~~i-iiS 96 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKIL-VIS 96 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCE-EEE
T ss_pred HHHHHHHHHHHhhccCCCeE-EEE
Confidence 3445678888887 766544 444
No 471
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=22.58 E-value=56 Score=31.52 Aligned_cols=43 Identities=14% Similarity=-0.005 Sum_probs=32.8
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCc----eeEEEEeeCCHHHHHHHHHc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLM----AVCVAVYEATGSQVQLALER 260 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~----~~~v~gvD~s~~~v~~A~~r 260 (372)
-+|||+=||.|.+...|.+.|.. ..++.++|+++.+++.-+.+
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n 57 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAI 57 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHH
Confidence 58999999999999888776632 12378899999888755543
No 472
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=22.38 E-value=49 Score=25.47 Aligned_cols=55 Identities=15% Similarity=0.193 Sum_probs=30.0
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCC-eEEEEeeccCCCCCCCCccEEEec
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLP-AMIGNFISRQLPYPSLSFDMVHCA 287 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~-~~~~~~d~~~lp~~~~sFDlV~~~ 287 (372)
.+|| +-||+|.-+..++.. .+-+.+.+.+++ +.+...+...++-....+|+|++.
T Consensus 19 ~kIl-vvC~sG~gTS~m~~~--------------kl~~~~~~~gi~~~~i~~~~~~~~~~~~~~~DlIi~t 74 (110)
T 3czc_A 19 VKVL-TACGNGMGSSMVIKM--------------KVENALRQLGVSDIESASCSVGEAKGLASNYDIVVAS 74 (110)
T ss_dssp EEEE-EECCCCHHHHHHHHH--------------HHHHHHHHTTCCCEEEEEECHHHHHHHGGGCSEEEEE
T ss_pred cEEE-EECCCcHHHHHHHHH--------------HHHHHHHHcCCCeEEEEEeeHHHHhhccCCCcEEEEC
Confidence 4677 889999887777652 112334455655 444333333222111357777765
No 473
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=22.26 E-value=1.1e+02 Score=31.76 Aligned_cols=54 Identities=13% Similarity=-0.023 Sum_probs=39.0
Q ss_pred CCeEEEeCCCCcHHHHHHHhcCC----ceeEEEEeeCCHHHHHHHHHcCCCeEEEEee
Q 017377 217 VQSVLDVGCGFGSFGAHLVSLKL----MAVCVAVYEATGSQVQLALERGLPAMIGNFI 270 (372)
Q Consensus 217 ~~~VLDIGCG~G~~~~~L~~~~~----~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d 270 (372)
..+|+|+=||.|.++.-|...+. .--.+.++|+++.+++.-+.+.....+.+.|
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp~~~~~~~d 269 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHPQTEVRNEK 269 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCTTSEEEESC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCCCCceecCc
Confidence 36899999999998877765431 1234678999999998887776555544443
No 474
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=21.57 E-value=2.6e+02 Score=26.95 Aligned_cols=90 Identities=13% Similarity=0.010 Sum_probs=49.6
Q ss_pred eEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeE---------------EEEeeccCCCCCCCCc
Q 017377 219 SVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAM---------------IGNFISRQLPYPSLSF 281 (372)
Q Consensus 219 ~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~---------------~~~~d~~~lp~~~~sF 281 (372)
++-=||.|. |. ++..|++.| ..|+++|.+++.++...+...+.. -..+. .+ . ..-
T Consensus 13 ~~~ViGlGyvGlp~A~~La~~G---~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td--~--~~a 84 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFAKHG---VDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TT--P--EAS 84 (431)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT---CEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SS--C--CCC
T ss_pred ccEEEeeCHHHHHHHHHHHHCC---CEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cc--h--hhC
Confidence 444567663 43 455556665 458899999999987765322210 00111 11 1 246
Q ss_pred cEEEeccccccccc------c---HHHHHHHHHhcccCCeEEEEE
Q 017377 282 DMVHCAQCGIIWDK------K---EGIFLIEADRLLKPGGYFVLT 317 (372)
Q Consensus 282 DlV~~~~~~~~~~~------~---~~~~L~el~rvLkPGG~lvis 317 (372)
|+|+..-. -.... | ...+...+.+.|+||-.++..
T Consensus 85 Dvvii~Vp-Tp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~ 128 (431)
T 3ojo_A 85 DVFIIAVP-TPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVE 128 (431)
T ss_dssp SEEEECCC-CCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEEC
T ss_pred CEEEEEeC-CCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 88876411 11111 1 345667888899998765543
No 475
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=21.01 E-value=79 Score=30.17 Aligned_cols=90 Identities=14% Similarity=0.105 Sum_probs=49.5
Q ss_pred eEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeE--------------EEEeeccCCCCCCCCcc
Q 017377 219 SVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAM--------------IGNFISRQLPYPSLSFD 282 (372)
Q Consensus 219 ~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~--------------~~~~d~~~lp~~~~sFD 282 (372)
+|.=||+|. |. ++..|++ + ..|+++|.++..++...+.+.++. +. + .....-.-...|
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G---~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~-~-t~~~~~~~~~aD 75 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-Q---NEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIK-A-TLDSKAAYKEAE 75 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-T---SEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEE-E-ESCHHHHHHHCS
T ss_pred EEEEECCCHHHHHHHHHHhC-C---CEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEE-E-eCCHHHHhcCCC
Confidence 455677763 33 2333443 4 568899999998887776665321 11 0 000000012468
Q ss_pred EEEeccccccc-----cc---cHHHHHHHHHhcccCCeEEEE
Q 017377 283 MVHCAQCGIIW-----DK---KEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 283 lV~~~~~~~~~-----~~---~~~~~L~el~rvLkPGG~lvi 316 (372)
+|+..-- ... .. ....++.++.+ ++||..++.
T Consensus 76 vviiavp-t~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~ 115 (402)
T 1dlj_A 76 LVIIATP-TNYNSRINYFDTQHVETVIKEVLS-VNSHATLII 115 (402)
T ss_dssp EEEECCC-CCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEE
T ss_pred EEEEecC-CCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEE
Confidence 8887521 110 01 24567888888 898877765
No 476
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=20.93 E-value=1.4e+02 Score=29.08 Aligned_cols=88 Identities=16% Similarity=0.015 Sum_probs=50.8
Q ss_pred CeEEEeCCCC-cHHHHHHHhcCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCCCCCCccEEEecccccccccc
Q 017377 218 QSVLDVGCGF-GSFGAHLVSLKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWDKK 296 (372)
Q Consensus 218 ~~VLDIGCG~-G~~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~~~ 296 (372)
++|+=+|+|. |...+..+.. ..+.|..+|.++.....|...|.. .. +..+. -...|+|+......++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra--~Ga~Viv~D~dp~ra~~A~~~G~~--v~--~Leea---l~~ADIVi~atgt~~l--- 288 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKA--MGSIVYVTEIDPICALQACMDGFR--LV--KLNEV---IRQVDIVITCTGNKNV--- 288 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHTTCE--EC--CHHHH---TTTCSEEEECSSCSCS---
T ss_pred CEEEEEeeCHHHHHHHHHHHH--CCCEEEEEeCChhhhHHHHHcCCE--ec--cHHHH---HhcCCEEEECCCCccc---
Confidence 7899999985 3333333332 234688899998766566655532 11 11111 1356988874222222
Q ss_pred HHHHHHHHHhcccCCeEEEEEeCC
Q 017377 297 EGIFLIEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 297 ~~~~L~el~rvLkPGG~lvis~p~ 320 (372)
+-.+....+|||++++-....
T Consensus 289 ---I~~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 289 ---VTREHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp ---BCHHHHHHSCTTEEEEECSST
T ss_pred ---CCHHHHHhcCCCcEEEEecCC
Confidence 123566788999988776554
No 477
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=20.80 E-value=3.8e+02 Score=23.08 Aligned_cols=87 Identities=10% Similarity=0.011 Sum_probs=49.9
Q ss_pred CeEEEeCCCC-cH-HHHHHHhcCCceeEEEEeeCCHHHHHHHHHc-CCCeEEEEeeccCCCCCCCCccEEEecccccccc
Q 017377 218 QSVLDVGCGF-GS-FGAHLVSLKLMAVCVAVYEATGSQVQLALER-GLPAMIGNFISRQLPYPSLSFDMVHCAQCGIIWD 294 (372)
Q Consensus 218 ~~VLDIGCG~-G~-~~~~L~~~~~~~~~v~gvD~s~~~v~~A~~r-gl~~~~~~~d~~~lp~~~~sFDlV~~~~~~~~~~ 294 (372)
.+|.=||+|. |. ++..+.+.+.. .+..+|.++..++.+.+. ++.. . .+..+. -...|+|+..-- .
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~--~v~~~~~~~~~~~~~~~~~g~~~--~-~~~~~~---~~~~Dvvi~av~--~-- 78 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFR--IVQVYSRTEESARELAQKVEAEY--T-TDLAEV---NPYAKLYIVSLK--D-- 78 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCC--EEEEECSSHHHHHHHHHHTTCEE--E-SCGGGS---CSCCSEEEECCC--H--
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCe--EEEEEeCCHHHHHHHHHHcCCce--e-CCHHHH---hcCCCEEEEecC--H--
Confidence 4688899873 33 34444555533 267789999888766654 5321 1 122111 135799987521 1
Q ss_pred ccHHHHHHHHHhcccCCeEEEE
Q 017377 295 KKEGIFLIEADRLLKPGGYFVL 316 (372)
Q Consensus 295 ~~~~~~L~el~rvLkPGG~lvi 316 (372)
.....++.++...+++|..++-
T Consensus 79 ~~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 79 SAFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEE
T ss_pred HHHHHHHHHHHhhcCCCcEEEE
Confidence 1224577778778888765554
No 478
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=20.16 E-value=1.6e+02 Score=24.70 Aligned_cols=96 Identities=21% Similarity=0.178 Sum_probs=49.5
Q ss_pred CeEEEeCCCCcHHHHHHHhcCCceeEEEEeeCC----HHHHHHHHHcCCCeEEEEeeccC-CCC----CCCCccEEEecc
Q 017377 218 QSVLDVGCGFGSFGAHLVSLKLMAVCVAVYEAT----GSQVQLALERGLPAMIGNFISRQ-LPY----PSLSFDMVHCAQ 288 (372)
Q Consensus 218 ~~VLDIGCG~G~~~~~L~~~~~~~~~v~gvD~s----~~~v~~A~~rgl~~~~~~~d~~~-lp~----~~~sFDlV~~~~ 288 (372)
.-|||+|=|+|..-..|.+.- ..-.|..+|-. ++.+ .....+..+++.+ +|. -....-++|+-.
T Consensus 42 GpVlElGLGNGRTydHLRe~~-P~R~I~vfDR~~~~hp~~~------P~~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~ 114 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHV-QGREIYVFERAVASHPDST------PPEAQLILGDIRETLPATLERFGATASLVHADL 114 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHC-CSSCEEEEESSCCCCGGGC------CCGGGEEESCHHHHHHHHHHHHCSCEEEEEECC
T ss_pred CceEEecCCCChhHHHHHHhC-CCCcEEEEEeeeccCCCCC------CchHheecccHHHHHHHHHHhcCCceEEEEeec
Confidence 469999999999999998863 33446666631 1110 0001111122111 111 134455666654
Q ss_pred ccccccccHH--HHH-HHHHhcccCCeEEEEEeCC
Q 017377 289 CGIIWDKKEG--IFL-IEADRLLKPGGYFVLTSPE 320 (372)
Q Consensus 289 ~~~~~~~~~~--~~L-~el~rvLkPGG~lvis~p~ 320 (372)
...+-..|.. ..| .-+..+|.|||+++-..|.
T Consensus 115 G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl 149 (174)
T 3iht_A 115 GGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRM 149 (174)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCC
T ss_pred CCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCcc
Confidence 4222111111 122 2367899999998766665
No 479
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=20.07 E-value=46 Score=31.53 Aligned_cols=22 Identities=27% Similarity=0.312 Sum_probs=19.7
Q ss_pred HHHHHHHHhcccCCeEEEEEeC
Q 017377 298 GIFLIEADRLLKPGGYFVLTSP 319 (372)
Q Consensus 298 ~~~L~el~rvLkPGG~lvis~p 319 (372)
..+|..+..+|+|||.+++.+.
T Consensus 254 ~~~L~~a~~~L~~gGRl~VISF 275 (347)
T 3tka_A 254 EQALKSSLNVLAPGGRLSIISF 275 (347)
T ss_dssp HHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHHhCCCCEEEEEec
Confidence 4678899999999999999977
No 480
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=20.06 E-value=1.7e+02 Score=24.37 Aligned_cols=93 Identities=17% Similarity=0.011 Sum_probs=47.7
Q ss_pred eEEEeCCCCcHHHHHHHh----cCCceeEEEEeeCCHHHHHHHHHcCCCeEEEEeeccCCCC-CCCCccEEEeccccccc
Q 017377 219 SVLDVGCGFGSFGAHLVS----LKLMAVCVAVYEATGSQVQLALERGLPAMIGNFISRQLPY-PSLSFDMVHCAQCGIIW 293 (372)
Q Consensus 219 ~VLDIGCG~G~~~~~L~~----~~~~~~~v~gvD~s~~~v~~A~~rgl~~~~~~~d~~~lp~-~~~sFDlV~~~~~~~~~ 293 (372)
+||=+|+ +|..|..+++ ++ ..|++++-++...+..... .+.+..+|..+... .-+.+|+|+.+.... |
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~-~ 74 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRG---HEVLAVVRDPQKAADRLGA--TVATLVKEPLVLTEADLDSVDAVVDALSVP-W 74 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTT---CEEEEEESCHHHHHHHTCT--TSEEEECCGGGCCHHHHTTCSEEEECCCCC-T
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCC---CEEEEEEecccccccccCC--CceEEecccccccHhhcccCCEEEECCccC-C
Confidence 4666664 5555555544 44 4577888887766543322 34444444433221 113579888764432 2
Q ss_pred c----ccHHHHHHHHHhcccC-CeEEEEEe
Q 017377 294 D----KKEGIFLIEADRLLKP-GGYFVLTS 318 (372)
Q Consensus 294 ~----~~~~~~L~el~rvLkP-GG~lvis~ 318 (372)
. .........+.+.++. |+.+++..
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~~~~v~~S 104 (224)
T 3h2s_A 75 GSGRGYLHLDFATHLVSLLRNSDTLAVFIL 104 (224)
T ss_dssp TSSCTHHHHHHHHHHHHTCTTCCCEEEEEC
T ss_pred CcchhhHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 1 1112234455555543 46666653
Done!