BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017380
(372 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80842|CFTSY_ARATH Cell division protein FtsY homolog, chloroplastic OS=Arabidopsis
thaliana GN=CPFTSY PE=1 SV=2
Length = 366
Score = 594 bits (1532), Expect = e-169, Method: Compositional matrix adjust.
Identities = 292/363 (80%), Positives = 328/363 (90%), Gaps = 6/363 (1%)
Query: 15 SKHTSFYLTNCLPQTR-----FSHCTAIRPATNRFKCSAGGQTGFFTRLGRLIKEKAKSD 69
S H SF P + F RP RF+CSAG +GFFTRLGRLIKEKAKSD
Sbjct: 5 SAHLSFLAGRISPFSSERIGLFPLRGEFRPRMTRFRCSAG-PSGFFTRLGRLIKEKAKSD 63
Query: 70 VEKIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRD 129
VEK+FSGFSKTR+NLAVIDELLL+WNLA+TD+VLDELEEALLVSDFGP+IT++IVE LR+
Sbjct: 64 VEKVFSGFSKTRENLAVIDELLLFWNLAETDRVLDELEEALLVSDFGPKITVRIVERLRE 123
Query: 130 DILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGK 189
DI++GKLKSG +IKDALK SVL++L KK +KTELQLG+RKPAV++IVGVNGGGKTTSLGK
Sbjct: 124 DIMSGKLKSGSEIKDALKESVLEMLAKKNSKTELQLGFRKPAVIMIVGVNGGGKTTSLGK 183
Query: 190 LAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRG 249
LA+RLKNEG K+LMAAGDTFRAAASDQLEIWAERTGCEIVVAEG+KAKA++VLS+AVKRG
Sbjct: 184 LAHRLKNEGTKVLMAAGDTFRAAASDQLEIWAERTGCEIVVAEGDKAKAATVLSKAVKRG 243
Query: 250 KEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQA 309
KE+G+D+VLCDTSGRLHTNYSLMEEL+ACKKAVGK+V+GAPNEILLVLDG TGLNMLPQA
Sbjct: 244 KEEGYDVVLCDTSGRLHTNYSLMEELIACKKAVGKIVSGAPNEILLVLDGNTGLNMLPQA 303
Query: 310 REFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNA 369
REFN+VVGITGLILTKLDGSARGGCVVSVV+ELGIPVKF+GVGE VEDLQPFD EAFVNA
Sbjct: 304 REFNEVVGITGLILTKLDGSARGGCVVSVVEELGIPVKFIGVGEAVEDLQPFDPEAFVNA 363
Query: 370 IFS 372
IFS
Sbjct: 364 IFS 366
>sp|O67066|FTSY_AQUAE Signal recognition particle receptor FtsY OS=Aquifex aeolicus
(strain VF5) GN=ftsY PE=3 SV=1
Length = 461
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/323 (43%), Positives = 207/323 (64%), Gaps = 11/323 (3%)
Query: 54 FFTRLGR---LIKEKAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEAL 110
F T+L + LI+EK +S ++K+ G KT++ + E + + D+ E E +
Sbjct: 146 FITQLKKELGLIEEKKESILDKLRRGLQKTKEAV----EFGVLFRGRKVDEEFFEELEEM 201
Query: 111 LV-SDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRK 169
LV +D G + +++ E LR + + +K G I K + EL++ +
Sbjct: 202 LVKADVGVKTAVELTEKLRKEAIRKNIKEGEKI--KELLKKELKELLKNCQGELKIPEKV 259
Query: 170 PAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIV 229
AV+L VGVNG GKTT++GKLA++LK +G K+L+ AGDTFRAAA +QLE+WA+R G +IV
Sbjct: 260 GAVLLFVGVNGSGKTTTIGKLAHQLKQKGKKVLLVAGDTFRAAAIEQLEVWAKRAGVDIV 319
Query: 230 VAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGA 289
E E + +V+ + +K+ KE+G+++VL DT+GRLHT L+ EL KK + K
Sbjct: 320 KKE-EGSDPGAVVYEGMKKAKEEGYEVVLVDTAGRLHTKEPLINELRKIKKVIQKFDKEE 378
Query: 290 PNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFV 349
P+E LLV+D TTG N + QA+ F + V ITG+++TKLDGSA+GG VV++ EL IP+K V
Sbjct: 379 PSETLLVIDATTGQNAIQQAKVFKEAVDITGIVVTKLDGSAKGGAVVAICRELKIPIKLV 438
Query: 350 GVGEGVEDLQPFDAEAFVNAIFS 372
GVGEG++DLQPFDA+A+V A+
Sbjct: 439 GVGEGIDDLQPFDADAYVEALLE 461
>sp|P57011|FTSY_NEIMB Signal recognition particle receptor FtsY OS=Neisseria meningitidis
serogroup B (strain MC58) GN=ftsY PE=3 SV=1
Length = 421
Score = 228 bits (580), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 191/300 (63%), Gaps = 4/300 (1%)
Query: 72 KIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDI 131
++ G +K+RD +A + D D + +ELE L+ SD G T +++ +RD +
Sbjct: 125 RLKQGLTKSRDKMAKSLAGVFGGGQIDED-LYEELETVLITSDMGMEATEYLMKDVRDRV 183
Query: 132 LAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLA 191
LK G +++ ALK ++ DL+ K K + ++P V+++ G+NG GKTTS+GKLA
Sbjct: 184 SLKGLKDGNELRGALKEALYDLI-KPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLA 242
Query: 192 YRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKE 251
+ +G +L+AAGDTFRAAA +QL+ W ER + V +++V AV+ K
Sbjct: 243 KYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN--VTVISQTTGDSAAVCFDAVQAAKA 300
Query: 252 QGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQARE 311
+G DIVL DT+GRL T LMEE+ K+ + K + AP+EI++VLD G N + Q +
Sbjct: 301 RGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKA 360
Query: 312 FNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
F+D +G+TGLI+TKLDG+A+GG + ++ + +PV+++GVGEG++DL+PFDA AFV+A+
Sbjct: 361 FDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDALL 420
>sp|P57010|FTSY_NEIMA Signal recognition particle receptor FtsY OS=Neisseria meningitidis
serogroup A / serotype 4A (strain Z2491) GN=ftsY PE=3
SV=1
Length = 421
Score = 228 bits (580), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 191/300 (63%), Gaps = 4/300 (1%)
Query: 72 KIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDI 131
++ G +K+RD +A + D D + +ELE L+ SD G T +++ +RD +
Sbjct: 125 RLKQGLTKSRDKMAKSLAGVFGGGQIDED-LYEELETVLITSDMGMEATEYLMKDVRDRV 183
Query: 132 LAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLA 191
LK G +++ ALK ++ DL+ K K + ++P V+++ G+NG GKTTS+GKLA
Sbjct: 184 SLKGLKDGNELRGALKEALYDLI-KPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLA 242
Query: 192 YRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKE 251
+ +G +L+AAGDTFRAAA +QL+ W ER + V +++V AV+ K
Sbjct: 243 KYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN--VTVISQTTGDSAAVCFDAVQAAKA 300
Query: 252 QGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQARE 311
+G DIVL DT+GRL T LMEE+ K+ + K + AP+EI++VLD G N + Q +
Sbjct: 301 RGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKA 360
Query: 312 FNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
F+D +G+TGLI+TKLDG+A+GG + ++ + +PV+++GVGEG++DL+PFDA AFV+A+
Sbjct: 361 FDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDALL 420
>sp|O30391|FTSY_NEIMC Signal recognition particle receptor FtsY OS=Neisseria meningitidis
serogroup C GN=ftsY PE=3 SV=1
Length = 421
Score = 225 bits (573), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 190/300 (63%), Gaps = 4/300 (1%)
Query: 72 KIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDI 131
++ G +K+RD +A + D D + +ELE L+ SD T +++ +RD +
Sbjct: 125 RLKQGLTKSRDKMAKSLAGVFGGGQIDED-LYEELETVLITSDMDMEATEYLMKDVRDRV 183
Query: 132 LAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLA 191
LK G +++ ALK ++ DL+ K K + ++P V+++ G+NG GKTTS+GKLA
Sbjct: 184 SLKGLKDGNELRGALKEALYDLI-KPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLA 242
Query: 192 YRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKE 251
+ +G +L+AAGDTFRAAA +QL+ W ER + V +++V AV+ K
Sbjct: 243 KYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN--VTVISQTTGDSAAVCFDAVQAAKA 300
Query: 252 QGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQARE 311
+G DIVL DT+GRL T LMEE+ K+ + K + AP+EI++VLD G N + Q +
Sbjct: 301 RGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAMPDAPHEIIVVLDANIGQNAVNQVKA 360
Query: 312 FNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
F+D +G+TGLI+TKLDG+A+GG + ++ + +PV+++GVGEG++DL+PFDA AFV+A+
Sbjct: 361 FDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDALL 420
>sp|A9CHH2|FTSY_AGRT5 Signal recognition particle receptor FtsY OS=Agrobacterium
tumefaciens (strain C58 / ATCC 33970) GN=ftsY PE=3 SV=1
Length = 478
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 128/302 (42%), Positives = 185/302 (61%), Gaps = 8/302 (2%)
Query: 71 EKIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDD 130
+++ +G ++T L L D D LDELE+ L+ SD G ++I +L +
Sbjct: 180 QRLRAGLARTSSQLTTQISALFTKRKLDED-TLDELEDLLIQSDLGVETAMRITGALSSE 238
Query: 131 ILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKL 190
GK SG D+ + + +L EL L + KP V+L+VGVNG GKTT++GKL
Sbjct: 239 RY-GKDVSGEDVARIMAGEITKVLKPVAKPLELDLSH-KPHVILVVGVNGTGKTTTIGKL 296
Query: 191 AYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEK--AKASSVLSQAVKR 248
A +L G K+++AAGDTFRAAA +QL+IWA+RTG E + G K A A+ + A ++
Sbjct: 297 AAKLSGSGLKVMLAAGDTFRAAAIEQLKIWADRTGSEFI---GTKLGADAAGLAYDAYEQ 353
Query: 249 GKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQ 308
+ Q D+++ DT+GRL LM EL + +GK+ AP+ +L LD TTG N + Q
Sbjct: 354 ARAQKSDVLIIDTAGRLQNKTELMAELEKIVRVLGKLDPDAPHTVLQTLDATTGQNAMNQ 413
Query: 309 AREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVN 368
F +V G++GLI+TKLDG+ARGG +V++ + +PV F+GVGEGVEDL+PF+AE F
Sbjct: 414 VEIFRNVAGVSGLIMTKLDGTARGGILVAIAAKHKLPVYFIGVGEGVEDLEPFEAEDFAK 473
Query: 369 AI 370
AI
Sbjct: 474 AI 475
>sp|P51835|FTSY_BACSU Signal recognition particle receptor FtsY OS=Bacillus subtilis
(strain 168) GN=ftsY PE=1 SV=2
Length = 329
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 123/322 (38%), Positives = 201/322 (62%), Gaps = 6/322 (1%)
Query: 54 FFTRLGRLIKEKAKSDVEKIFSGFSKTRDNLA--VIDELLLYWNLADTDKVLDELEEALL 111
FF +L I ++ S EK G KTR++ V D + Y + + LEE L+
Sbjct: 3 FFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEE--LEEVLI 60
Query: 112 VSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNK-TELQLGYRKP 170
+D G +++++ L+ ++ ++ +++ + ++++ + +EL + +
Sbjct: 61 SADVGFTTVMELIDELKKEVKRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRL 120
Query: 171 AVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVV 230
V+L+VGVNG GKTT++GKLA+++K EG +++AAGDTFRA A +QLE+W ERTG V+
Sbjct: 121 NVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFRAGAIEQLEVWGERTGVP-VI 179
Query: 231 AEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAP 290
+ + ++V+ AV K + D+++CDT+GRL +LM+EL K+ + + V AP
Sbjct: 180 KQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAP 239
Query: 291 NEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVG 350
+E+LL LD TTG N + QA+EF+ +TG+ LTKLDG+A+GG V+++ +EL IPVK VG
Sbjct: 240 HEVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVG 299
Query: 351 VGEGVEDLQPFDAEAFVNAIFS 372
+GE V+DLQ FD E++V +FS
Sbjct: 300 LGEKVDDLQEFDPESYVYGLFS 321
>sp|Q726P7|FTSY_DESVH Signal recognition particle receptor FtsY OS=Desulfovibrio vulgaris
(strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ftsY
PE=3 SV=1
Length = 488
Score = 215 bits (547), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 187/301 (62%), Gaps = 7/301 (2%)
Query: 72 KIFSGFSKTRDNLAV-IDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDD 130
K+ G ++TR+ + ID LL D + +ELEE L+++D G T +++ LR+
Sbjct: 186 KLTEGLARTREQIGRRIDGLLASHGRID-EGFWEELEEILIMADVGFEPTTQLIGRLRER 244
Query: 131 ILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKL 190
++ L+ L+++ + + P VVL++GVNG GKTT++ KL
Sbjct: 245 ARKAGTDDPARFRELLREE-LEVIFRAPRRI---AAVNPPEVVLLIGVNGVGKTTTIAKL 300
Query: 191 AYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGK 250
AYR + +G K+L+AAGDTFRAAA +QLEIWA+R G A+ A ++V +A+ +
Sbjct: 301 AYRAQLQGRKVLIAAGDTFRAAAIEQLEIWAKRVGAGFY-AKTAGADPAAVAYEAMDKAV 359
Query: 251 EQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAR 310
+G+D++L DT+GRLHT +LMEEL +K +G+ GAP+ +LV+D TTG N L Q +
Sbjct: 360 SEGYDLLLVDTAGRLHTKANLMEELHKIRKVLGRKHPGAPHRSILVIDATTGQNALSQTK 419
Query: 311 EFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 370
FN+ G+ ++LTKLDG+A+GG VV+V + GIP+ +VG+GE +ED++PF+ F A+
Sbjct: 420 LFNEACGVDEIVLTKLDGTAKGGIVVAVAMQFGIPITYVGLGEKMEDMRPFNGSDFAMAL 479
Query: 371 F 371
Sbjct: 480 L 480
>sp|P10121|FTSY_ECOLI Signal recognition particle receptor FtsY OS=Escherichia coli
(strain K12) GN=ftsY PE=1 SV=1
Length = 497
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 126/321 (39%), Positives = 199/321 (61%), Gaps = 21/321 (6%)
Query: 53 GFFTRLGR-LIKEKAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALL 111
GFF RL R L+K K E + SGF + L+ D + +ELEE LL
Sbjct: 194 GFFARLKRSLLKTK-----ENLGSGF------------ISLFRGKKIDDDLFEELEEQLL 236
Query: 112 VSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPA 171
++D G T KI+ +L + +L+ + LK + ++L K L + + P
Sbjct: 237 IADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMGEILAKVDEP--LNVEGKAPF 294
Query: 172 VVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVA 231
V+L+VGVNG GKTT++GKLA + + +G +++AAGDTFRAAA +QL++W +R V+A
Sbjct: 295 VILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIP-VIA 353
Query: 232 EGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPN 291
+ A ++SV+ A++ K + D+++ DT+GRL LMEEL + + K+ AP+
Sbjct: 354 QHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPH 413
Query: 292 EILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGV 351
E++L +D +TG N + QA+ F++ VG+TG+ LTKLDG+A+GG + SV D+ GIP++++GV
Sbjct: 414 EVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDGTAKGGVIFSVADQFGIPIRYIGV 473
Query: 352 GEGVEDLQPFDAEAFVNAIFS 372
GE +EDL+PF A+ F+ A+F+
Sbjct: 474 GERIEDLRPFKADDFIEALFA 494
>sp|P14929|FTSY_NEIGO Signal recognition particle receptor FtsY OS=Neisseria gonorrhoeae
GN=ftsY PE=1 SV=2
Length = 416
Score = 211 bits (536), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 186/300 (62%), Gaps = 5/300 (1%)
Query: 72 KIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDI 131
++ G +K+RD +A + D + +ELE L+ D G T +++ +R +
Sbjct: 121 RLKQGLAKSRDKMAKSLAGVFGGGQIGED-LYEELETVLITGDMGMEATEYLMKDVRGRV 179
Query: 132 LAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLA 191
LK G +++ ALK ++ DL+ K K + ++P V+++ G+NG GKTTS+GKLA
Sbjct: 180 SLKGLKDGNELRGALKEALYDLI-KPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLA 238
Query: 192 YRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKE 251
+ +G +L+AAGDTFRAAA +QL+ W R + V +++V AV+ K
Sbjct: 239 KYFQAQGKSVLLAAGDTFRAAAREQLQAWGGRNN--VTVISQTTGDSAAVCFDAVQAAKA 296
Query: 252 QGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQARE 311
+ DIVL DT+GRL T LMEE+ K+ + K + GAP+EI++VLD G N + Q +
Sbjct: 297 R-IDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKA 355
Query: 312 FNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
F+D +G+TGLI+TKLDG+A+GG + ++ + +PV+++GVGEG++DL+PFDA AFV+ +
Sbjct: 356 FDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGIDDLRPFDARAFVDRLL 415
>sp|Q89B28|FTSY_BUCBP Signal recognition particle receptor FtsY OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=ftsY PE=3 SV=1
Length = 397
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 173/275 (62%), Gaps = 7/275 (2%)
Query: 100 DKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGN 159
+ +LD++EE LLVSD G R T ++V+SL +LK+ I + LK+ + +L N
Sbjct: 123 NSLLDDIEEQLLVSDIGVRTTRELVDSLIKVSTQHELKNLNLIIEILKSKMKKIL----N 178
Query: 160 KTE--LQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQL 217
K E L + Y+ V+L+VGVNG GKTT +GKLA K +G +++AAGDTFRAAA DQL
Sbjct: 179 KVEGPLNINYKNLFVILVVGVNGVGKTTLIGKLAKNYKKKGKSVILAAGDTFRAAAIDQL 238
Query: 218 EIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVA 277
++W E ++ E + +SV+ A+K K + DI++ DT+GRLH +LMEEL
Sbjct: 239 KLWGEINSVSVITREI-GSDPASVVYDAIKIAKLKCIDILIIDTAGRLHNKNNLMEELKK 297
Query: 278 CKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVS 337
K+ + K+ + E +LVLD G N + Q + F++ + +TGL++TKLD +A+GG + S
Sbjct: 298 IKRVIHKIDSTISQETMLVLDACIGQNSIKQVKIFHESLNVTGLVITKLDSTAKGGVIFS 357
Query: 338 VVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS 372
+ E IPV+++ GE ED+Q F++ FVNAI S
Sbjct: 358 IAQEFLIPVRYISFGEDFEDIQVFNSNIFVNAILS 392
>sp|P44870|FTSY_HAEIN Signal recognition particle receptor FtsY OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ftsY PE=3
SV=1
Length = 414
Score = 209 bits (531), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 169/260 (65%), Gaps = 2/260 (0%)
Query: 112 VSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPA 171
++D G T KI+++L + +L+ + LK + D+L E+ +KP
Sbjct: 152 IADIGVPTTSKIIKNLTEHASRKELQDAELLYQQLKVEMADILEPVAQPLEID-STKKPY 210
Query: 172 VVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVA 231
V+L+VGVNG GKTT++GKLA + + EG +++AAGDTFRAAA +QL++W ER VVA
Sbjct: 211 VILMVGVNGVGKTTTIGKLARKFQAEGKSVMLAAGDTFRAAAVEQLQVWGERNHIP-VVA 269
Query: 232 EGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPN 291
+ + ++SV+ A++ + DI++ DT+GRL +LM+EL + + K AP+
Sbjct: 270 QSTGSDSASVIFDAMQSAAARNIDILIADTAGRLQNKNNLMDELKKIVRVMKKYDETAPH 329
Query: 292 EILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGV 351
EI+L LD TG N + QA+ FN+ VG+TG+ LTKLDG+A+GG + ++ D+ +P++++GV
Sbjct: 330 EIMLTLDAGTGQNAISQAKLFNEAVGLTGISLTKLDGTAKGGVIFAIADQFKLPIRYIGV 389
Query: 352 GEGVEDLQPFDAEAFVNAIF 371
GE +EDL+ F+A+ F+ A+F
Sbjct: 390 GEKIEDLREFNAKEFIEALF 409
>sp|P66842|FTSY_MYCTU Signal recognition particle receptor FtsY OS=Mycobacterium
tuberculosis GN=ftsY PE=3 SV=1
Length = 422
Score = 204 bits (519), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 176/268 (65%), Gaps = 4/268 (1%)
Query: 105 ELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQ 164
++E+ LLV+D GP T +V LR + +G +++ D + L++ +++ L +++
Sbjct: 157 DVEDTLLVADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGMDRSIRA 216
Query: 165 LGYR-KPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAER 223
L + P+V+L+VGVNG GKTT++GKLA L +G ++++ A DTFRAAA+DQL+ WA R
Sbjct: 217 LPHAGHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAAR 276
Query: 224 TGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVG 283
G +V E A +SV AV +G G D+VL DT+GRLHT LM+EL K+ V
Sbjct: 277 VGAAVVRGP-EGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVT 335
Query: 284 KVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELG 343
+ + +E+LLVLD T G N L QAR F +VV I+G +LTKLDG+A+GG V V ELG
Sbjct: 336 R--RASVDEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELG 393
Query: 344 IPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
+PVK VG+GEG +DL PF+ AFV+A+
Sbjct: 394 VPVKLVGLGEGPDDLAPFEPAAFVDALL 421
>sp|P66843|FTSY_MYCBO Signal recognition particle receptor FtsY OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ftsY PE=3 SV=1
Length = 422
Score = 204 bits (519), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 122/268 (45%), Positives = 176/268 (65%), Gaps = 4/268 (1%)
Query: 105 ELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQ 164
++E+ LLV+D GP T +V LR + +G +++ D + L++ +++ L +++
Sbjct: 157 DVEDTLLVADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGMDRSIRA 216
Query: 165 LGYR-KPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAER 223
L + P+V+L+VGVNG GKTT++GKLA L +G ++++ A DTFRAAA+DQL+ WA R
Sbjct: 217 LPHAGHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAAR 276
Query: 224 TGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVG 283
G +V E A +SV AV +G G D+VL DT+GRLHT LM+EL K+ V
Sbjct: 277 VGAAVVRGP-EGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVT 335
Query: 284 KVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELG 343
+ + +E+LLVLD T G N L QAR F +VV I+G +LTKLDG+A+GG V V ELG
Sbjct: 336 R--RASVDEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELG 393
Query: 344 IPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
+PVK VG+GEG +DL PF+ AFV+A+
Sbjct: 394 VPVKLVGLGEGPDDLAPFEPAAFVDALL 421
>sp|O33010|FTSY_MYCLE Signal recognition particle receptor FtsY OS=Mycobacterium leprae
(strain TN) GN=ftsY PE=3 SV=1
Length = 430
Score = 201 bits (511), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/268 (46%), Positives = 173/268 (64%), Gaps = 4/268 (1%)
Query: 105 ELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQ 164
ELE+ LLV+D GP T ++ +LR +L + + D + L++ ++ L +++
Sbjct: 165 ELEDTLLVADLGPVATESVMSALRSRLLNSNVHTESDARTMLRDVLISELQPDMDRSIRA 224
Query: 165 LGY-RKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAER 223
L + PAV+LIVGVNG GKTT++GKLA L +G ++++ A DTFRAAA+DQL+ WA R
Sbjct: 225 LPHADHPAVLLIVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWASR 284
Query: 224 TGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVG 283
G E+V E A +SV AV +G G D+V+ DT+GRLHT LM+EL K+ V
Sbjct: 285 VGAELVRGV-EGADPASVAFDAVDKGIGAGADVVVIDTAGRLHTKVGLMDELDKIKRVVT 343
Query: 284 KVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELG 343
+ A +E+LLVLD T G N L Q R F +VV ITG +LTKLDG+A+GG V + ELG
Sbjct: 344 R--RAAVDEVLLVLDATIGQNGLTQVRVFAEVVDITGAVLTKLDGTAKGGIVFRIQRELG 401
Query: 344 IPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
+PVK VG+GEG +DL PF+ FV+A+
Sbjct: 402 VPVKLVGLGEGPDDLAPFEPAVFVDALL 429
>sp|O32861|FTSY_MYCHP Signal recognition particle receptor FtsY OS=Mycoplasma hominis
(strain ATCC 23114 / NBRC 14850 / NCTC 10111 / PG21)
GN=ftsY PE=3 SV=1
Length = 351
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 150/220 (68%), Gaps = 8/220 (3%)
Query: 148 NSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGD 207
NSV+D T L + + V+L+VGVNG GKTTS+ K+A +L +EG K+L+AAGD
Sbjct: 131 NSVVD--------TTLNIKDNRLNVILVVGVNGSGKTTSISKIAKKLIDEGKKVLIAAGD 182
Query: 208 TFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHT 267
TFRAAA +QLEIWA+R G +IV + ++V+ +A+ K + +DI++ DT+GRL
Sbjct: 183 TFRAAAVEQLEIWAKRVGADIVTPNENEVDPAAVVYRAIDIAKSKKYDILIVDTAGRLQN 242
Query: 268 NYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLD 327
+LM EL + + + AP+E LLVLD TTG N + QAR F + +TG+ILTK+D
Sbjct: 243 KVNLMNELAKINRVLASKIPDAPHESLLVLDATTGQNGVIQARVFKESTPLTGIILTKMD 302
Query: 328 GSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 367
G+++GG V+++ DE+G+ VK++G+GE V+DL FD ++++
Sbjct: 303 GTSKGGIVLTIKDEIGLFVKYIGLGEKVDDLAEFDLDSYI 342
>sp|Q8G736|FTSY_BIFLO Signal recognition particle receptor FtsY OS=Bifidobacterium longum
(strain NCC 2705) GN=ftsY PE=3 SV=1
Length = 420
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 186/290 (64%), Gaps = 14/290 (4%)
Query: 89 ELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDI-LAGKLKSGPDIKDALK 147
++L NL++ D +++E+ LL++D G + ++V+ LR D + GK +++ LK
Sbjct: 139 DILAKDNLSEAD--WEDVEDTLLLADVGADASAQLVDDLRTDARITGKADPA-EVRATLK 195
Query: 148 NSVLDLLTKKGNKTELQL-----GYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKIL 202
+LDL+ G T+ +L G KP+V+++VGVNG GKTT+ GKLA E +++
Sbjct: 196 EKLLDLV---GRDTDRRLNAEKPGAAKPSVIIMVGVNGTGKTTTAGKLARLFVAENKQVM 252
Query: 203 MAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTS 262
M A DTFRAAA+DQLE W R +V ++ + A +SV +A + KE D+++ DT+
Sbjct: 253 MGAADTFRAAAADQLETWGARVNVPVVRSDKDGADPASVAFEASAKAKEANADVLIIDTA 312
Query: 263 GRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLI 322
GRL +LM+EL ++ K N +E+LLVLD TTG N + QA+ F + +GITG++
Sbjct: 313 GRLQNKSNLMDELGKIRRVTEK--NLPVDEVLLVLDATTGQNGMAQAKVFAEAIGITGVV 370
Query: 323 LTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS 372
L+KLDGSA+GG VVSV ELG+PVK VG+GEG +DL PFD E FV+ I +
Sbjct: 371 LSKLDGSAKGGIVVSVQKELGVPVKLVGLGEGPDDLAPFDPEGFVDGILA 420
>sp|P57137|FTSY_BUCAI Signal recognition particle receptor FtsY OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=ftsY PE=3
SV=1
Length = 378
Score = 198 bits (503), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 172/274 (62%), Gaps = 4/274 (1%)
Query: 100 DKVL-DELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKG 158
D+VL +ELEE +L++D G T +I+ +L D+ LK+ + LK + ++L K
Sbjct: 108 DEVLFEELEEKMLLADIGINTTNRIISNLIKDVNREDLKNSEKLYFLLKRKMFNILKKV- 166
Query: 159 NKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLE 218
+ L++ P V+L+VGVNG GKTT++ KLA + K EG I++AA DTFRAA +QL+
Sbjct: 167 -EIPLEISSHSPFVILVVGVNGTGKTTTVAKLAEKYKLEGKSIMLAAADTFRAAGIEQLQ 225
Query: 219 IWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVAC 278
+ V+A+ + ++V+ AVK K + D+++ DT+GRLH L+EEL
Sbjct: 226 TLGKLNNIP-VIAQRSGSDPAAVIFDAVKSAKSKKIDVLIIDTAGRLHNKLHLIEELKKI 284
Query: 279 KKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSV 338
+ + K+ AP+E LL++D G N + Q F+ + +TG+I+TKLDG+A+GG V S+
Sbjct: 285 VRVIKKIDISAPHEKLLIIDSCNGQNTIQQTEIFHKALNLTGIIITKLDGTAKGGVVFSL 344
Query: 339 VDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS 372
D+ IP++++G+GE ++DL F+++ F+ +IF+
Sbjct: 345 ADQFQIPIRYIGIGEKMQDLGHFNSQEFIESIFT 378
>sp|Q9RS67|FTSY_DEIRA Signal recognition particle receptor FtsY OS=Deinococcus
radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /
LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422)
GN=ftsY PE=3 SV=1
Length = 317
Score = 197 bits (502), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 183/317 (57%), Gaps = 27/317 (8%)
Query: 71 EKIFSGFSKTRDNLA-----VIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVE 125
+++ G SKTR ++ + E+ + D +++LE AL+ +D G T +I+E
Sbjct: 5 DRLRQGLSKTRQQISGTAGPLDQEVQTAFTRIDN---IEDLEYALIAADVGRAATEEIIE 61
Query: 126 SLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTEL-QLGYR----------KPAVVL 174
+R + G+L+ DAL ++ L + + +LG+ K VV+
Sbjct: 62 DIRKN-GEGRLQ------DALMRALTLQLEPNARRAQFRELGFSPDVSRSKVDPKGHVVM 114
Query: 175 IVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGE 234
++GVNG GKTT++ KL G ++ AAGDTFRAAA QL +W ER G ++
Sbjct: 115 VIGVNGVGKTTTIAKLGQYYMERGQSVMFAAGDTFRAAAGTQLGVWGERLGVPVIQGVDG 174
Query: 235 KAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEIL 294
A+ A R K +G D++ DT+GRLH ++LMEEL ++ + K G P E+
Sbjct: 175 GDPAAVAFDAAGAR-KARGTDLLFVDTAGRLHNKHNLMEELKKVRRVIDKADPGEPAEVW 233
Query: 295 LVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEG 354
LVLD TG N L QA++F++ +TG+++TKLDG+A+GG +V +V ELG+P+KF+GVGE
Sbjct: 234 LVLDAVTGQNGLQQAKKFHEATPLTGVVVTKLDGTAKGGILVPIVRELGVPIKFIGVGEQ 293
Query: 355 VEDLQPFDAEAFVNAIF 371
DLQPFD++ FV A+F
Sbjct: 294 PGDLQPFDSQEFVRALF 310
>sp|P75362|FTSY_MYCPN Signal recognition particle receptor FtsY OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=ftsY PE=3 SV=1
Length = 348
Score = 197 bits (502), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 115/315 (36%), Positives = 189/315 (60%), Gaps = 6/315 (1%)
Query: 57 RLGRLIKEKA--KSDVEKIFSGFSKTRDNLA-VIDELLLYWNLADTDKVLDELEEALLVS 113
++ + ++EK+ +++ + + G +K+ ++ A I++L + + ++ + L E L++
Sbjct: 20 QVQQAVQEKSFFQANQKSYYQGLNKSANSFANTINKLAANY-VTVNEQFQESLFEELVLL 78
Query: 114 DFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNS-VLDLLTKKGNKTELQLGYRKPAV 172
D G KI +++ ++ ++ I++ + + ++ + K +T+L + K V
Sbjct: 79 DIGYHAATKICDAIVQELKLQRVSDPQLIQEIIVDKLIVYYIQDKLFETDLTVEANKTNV 138
Query: 173 VLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAE 232
L VGVNG GKTTSL KLA +L + ++LM AGDTFRA A QL WA+R GC+IV+
Sbjct: 139 YLFVGVNGVGKTTSLAKLADQLTKQNKRVLMVAGDTFRAGAVAQLAEWAQRIGCDIVLP- 197
Query: 233 GEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNE 292
K + +V+ + V++G + +D VLCDTSGRL +LM EL + V KV + P E
Sbjct: 198 NPKEETPAVIFRGVQQGIQNEYDFVLCDTSGRLQNKTNLMNELKKIYQIVQKVSSAKPQE 257
Query: 293 ILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVG 352
LLVLDGTTG + L QA+ FN+ +TG+ILTK+D S++GG ++++ D +PVK +G G
Sbjct: 258 TLLVLDGTTGQSGLAQAKVFNEFTELTGIILTKMDSSSKGGIILAIKDLFNLPVKLIGFG 317
Query: 353 EGVEDLQPFDAEAFV 367
E DL FD E +V
Sbjct: 318 ETTADLAAFDLEQYV 332
>sp|Q68VX4|FTSY_RICTY Signal recognition particle receptor FtsY OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=ftsY PE=3 SV=1
Length = 303
Score = 194 bits (493), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/298 (37%), Positives = 171/298 (57%), Gaps = 11/298 (3%)
Query: 72 KIFSGFSKTRDNLAV-IDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDD 130
K+ SKT + ++ ID++ L T L+ELEE L+ SD + I+E ++
Sbjct: 7 KLKQSLSKTSNTISTGIDKIFYKKKLDQT--TLNELEELLISSDISITVVTHIIEKFKNV 64
Query: 131 ILAGKLKSGPDIKDALKNSVLDLLTKKGNKTEL--QLGYRKPAVVLIVGVNGGGKTTSLG 188
+ S D +K ++ L+ ++ +K+E+ L K ++LI GVNG GKTT++G
Sbjct: 65 KFDKTIDS-----DTVKEAIAKLIEQQLSKSEIPFTLSENKLNIILICGVNGVGKTTTIG 119
Query: 189 KLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKR 248
KL+ +G K+ +AA DTFRAAA +QL W +R ++ E A +SV +A++
Sbjct: 120 KLSALYSAQGKKVAVAACDTFRAAAINQLSSWVDRANALLITGEVS-ADPASVAYRAIQE 178
Query: 249 GKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQ 308
+Q DI+ DT+GRLH N +LM+EL K + K+ AP +L++D TG N Q
Sbjct: 179 SIKQNIDILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAPTHSILIIDAVTGQNTYNQ 238
Query: 309 AREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAF 366
FNDV +TGLI+TKLDGSA+ G +V V + +P+ F+G+GE +EDL+ F+ F
Sbjct: 239 IEYFNDVTNLTGLIITKLDGSAKAGVLVGAVQKFNLPIYFIGIGEQIEDLKIFNRHDF 296
>sp|Q8KA77|FTSY_BUCAP Signal recognition particle receptor FtsY OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsY PE=3 SV=1
Length = 351
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 165/274 (60%), Gaps = 7/274 (2%)
Query: 100 DKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGN 159
D +ELE+ +L+SD G T +I+ L +D +LK+ + LK + +L N
Sbjct: 81 DAFFEELEDTMLLSDIGVHTTDQIISKLINDATHKELKNPEKVYFLLKEHMYSIL----N 136
Query: 160 KTE--LQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQL 217
+ E L++ P V+L+VG+NG GKTT++ KLA + K G +++AA DTFRAA +QL
Sbjct: 137 RVEKPLKISNHTPFVILVVGINGTGKTTTVSKLAKKYKLAGKSVMLAAADTFRAAGIEQL 196
Query: 218 EIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVA 277
+I +R V+++ + +SV AVK + D+++ DT+GRLH L+EEL
Sbjct: 197 QILGKRNNIP-VISQSSGSDPASVAFDAVKSAISKKIDVLIIDTAGRLHNKLHLLEELKK 255
Query: 278 CKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVS 337
+ + K+ AP+EI+L++D G N + Q F+ + +TGL++TKLDG+A+GG + S
Sbjct: 256 MVRVIKKLNLSAPHEIMLIIDACNGQNTIKQTEMFHKAINLTGLVITKLDGTAKGGVIFS 315
Query: 338 VVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
+ ++ IP++++G+GE DL F++ F+ +IF
Sbjct: 316 LANQFLIPIRYIGIGEKTTDLVVFNSNDFIKSIF 349
>sp|Q8CWX8|FTSY_STRMU Signal recognition particle receptor FtsY OS=Streptococcus mutans
serotype c (strain ATCC 700610 / UA159) GN=ftsY PE=3
SV=1
Length = 498
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 160/263 (60%), Gaps = 3/263 (1%)
Query: 110 LLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRK 169
L++SD G ++ + E LR + K K ++ + ++D+ K G E ++ ++
Sbjct: 234 LILSDVGVQVASTLTEDLRYEAKLEKAKKPEALRRVIIEKLVDIYDKDGQFNE-KINFQN 292
Query: 170 P-AVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEI 228
V+L VGVNG GKTTS+GKLAY+ K++G K+++ A DTFRA A QL W R +
Sbjct: 293 DLTVMLFVGVNGVGKTTSIGKLAYKYKHQGKKVMLVAADTFRAGAVAQLAEWGRRVDVPV 352
Query: 229 VVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNG 288
V + A +SV+ V+R DI++ DT+GRL +LM EL + V +V+
Sbjct: 353 VTG-PKNADPASVVYDGVERAVAADVDILMIDTAGRLQNKDNLMAELEKIGRVVKRVIPD 411
Query: 289 APNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKF 348
AP+E LL LD +TG N L QA+EF+ + +TGLILTK+DG+A+GG V+++ EL IPVKF
Sbjct: 412 APHETLLTLDASTGQNALVQAKEFSKITPLTGLILTKIDGTAKGGVVLAIRQELAIPVKF 471
Query: 349 VGVGEGVEDLQPFDAEAFVNAIF 371
+G GE ++D+ F +E F+ +
Sbjct: 472 IGFGEKIDDIGEFHSEDFMRGLL 494
>sp|Q6MTB9|FTSY_MYCMS Signal recognition particle receptor FtsY OS=Mycoplasma mycoides
subsp. mycoides SC (strain PG1) GN=ftsY PE=1 SV=1
Length = 400
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 176/299 (58%), Gaps = 13/299 (4%)
Query: 75 SGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAG 134
S F+ ++D I +L + AD D+ +ELE+ L+ +D G ++ +K+ +R
Sbjct: 94 SAFNFSKD----IKKLSKKYKQAD-DEFFEELEDVLIQTDMGMKMVLKVSNLVRKK--TK 146
Query: 135 KLKSGPDIKDALKNSVLDLLTKK---GNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLA 191
+ S +IKDAL S+ T K + + + ++VGVNG GKTTSL K+A
Sbjct: 147 RDTSFENIKDALVESLYQAYTDNDWTNKKYRIDFKENRLNIFMLVGVNGTGKTTSLAKMA 206
Query: 192 YRLKNEGAKILMAAGDTFRAAASDQLEIWAE---RTGCEIVVAEGEKAKASSVLSQAVKR 248
G K+L+AA DTFRA A+ QLE W + ++V A A +SV+ A+K+
Sbjct: 207 NYYAELGYKVLIAAADTFRAGATQQLEEWIKTRLNNKVDLVKANKLNADPASVVFDAIKK 266
Query: 249 GKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQ 308
KEQ +D++L DT+GRL +LM EL K + +V AP+E+LLV+D TTG N + Q
Sbjct: 267 AKEQNYDLLLIDTAGRLQNKVNLMAELEKMNKIIQQVEKSAPHEVLLVIDATTGQNGVIQ 326
Query: 309 AREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 367
A EF+ V ++G+ILTK+D +++GG +++ + L IP+K +GVGE V+DL FD + ++
Sbjct: 327 AEEFSKVADVSGIILTKMDSTSKGGIGLAIKELLNIPIKMIGVGEKVDDLLAFDIDQYI 385
>sp|Q4UK46|FTSY_RICFE Signal recognition particle receptor FtsY OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=ftsY PE=3 SV=1
Length = 303
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 155/263 (58%), Gaps = 10/263 (3%)
Query: 111 LVSDFGPRITIKIVESLRDDILAGKLKSGPDI-KDALKNSVLDLLTKKGNKTEL--QLGY 167
+ SD + I+E + K+K +I D +K ++ +L+ ++ +K+E+ L
Sbjct: 45 IASDMSVSVVTNIIEEFK------KVKFDKEIDSDTVKEALAELIEQQLSKSEIPFTLNE 98
Query: 168 RKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCE 227
K V+L+ GVNG GKTT++GKLA +G K+ +AA DTFRAAA +QL W +R
Sbjct: 99 NKLNVILVCGVNGAGKTTTIGKLAAMYGMQGKKVAVAACDTFRAAAVNQLSTWVDRANAL 158
Query: 228 IVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVN 287
++ E E A +SV +A++ +Q DI+ DT+GRLH +LM+EL K + K+
Sbjct: 159 LITGE-ESADPASVAYRAMEESIKQNIDILFIDTAGRLHNKKNLMDELSKIVKVIKKLDE 217
Query: 288 GAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVK 347
AP +LV+D TG N Q FND +TGLI+TKLDGSA+ G +V VV + +PV
Sbjct: 218 NAPTHSVLVIDAITGQNTYNQVEHFNDATNLTGLIVTKLDGSAKAGVLVGVVQKFNLPVY 277
Query: 348 FVGVGEGVEDLQPFDAEAFVNAI 370
F+G+GE +EDL+ F+ F ++
Sbjct: 278 FIGIGEKIEDLKIFNRHDFAKSL 300
>sp|P83749|FTSY_THEAQ Signal recognition particle receptor FtsY OS=Thermus aquaticus
GN=ftsY PE=1 SV=2
Length = 304
Score = 184 bits (468), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/243 (45%), Positives = 158/243 (65%), Gaps = 13/243 (5%)
Query: 141 DIKDALKNSVLDLLTKKGNKTEL-QLGY--RKPAVV-------LIVGVNGGGKTTSLGKL 190
D+K+A+K ++ +L + L +LG+ +KP V L+VGVNG GKTT++ KL
Sbjct: 63 DLKEAVKEKLVGMLEPDERRATLRKLGFNPQKPKPVEPKGRVVLVVGVNGVGKTTTIAKL 122
Query: 191 AYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLS-QAVKRG 249
+N G K++ AGDTFRAA QL W +R I V +G + + L+ AV+
Sbjct: 123 GRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKR--LSIPVIQGPEGTDPAALAYDAVQAM 180
Query: 250 KEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQA 309
K +G+D++ DT+GRLHT ++LMEEL K+A+ K P E+ LVLD TG N L QA
Sbjct: 181 KARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQA 240
Query: 310 REFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNA 369
++F++ VG+TG+I+TKLDG+A+GG ++ +V L +P+KFVGVGEG +DLQPFD EAFV A
Sbjct: 241 KKFHEAVGLTGVIVTKLDGTAKGGVLIPIVRTLKVPIKFVGVGEGPDDLQPFDPEAFVEA 300
Query: 370 IFS 372
+
Sbjct: 301 LLE 303
>sp|P47539|FTSY_MYCGE Signal recognition particle receptor FtsY OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=ftsY PE=3
SV=1
Length = 346
Score = 182 bits (461), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 182/334 (54%), Gaps = 22/334 (6%)
Query: 53 GFFTRLGRLIKEKA------KSDVEK----------IFSGFSKTRDNLA-VIDEL-LLYW 94
GF ++L +K K K +VEK + G K+ A I+EL Y
Sbjct: 2 GFLSKLIAKLKPKKSVAKQLKEEVEKQSLFQTNNKTYYQGLKKSATTFAKTINELSKRYV 61
Query: 95 NLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVL-DL 153
N+ + K + L E L++ D G KI +++ + I ++ IK+ + + ++
Sbjct: 62 NVDEQFK--ENLFEGLVLLDVGYHAANKICDAIIEQIKLNRITDFQLIKELIIDQIIVYY 119
Query: 154 LTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAA 213
+ K T+L + V L VGVNG GKTT+L K+A + ++L+ AGDTFRA A
Sbjct: 120 IQDKLFDTDLIVKPNFTNVYLFVGVNGVGKTTTLAKIADFFIKQNKRVLLVAGDTFRAGA 179
Query: 214 SDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLME 273
+QL WA+ C+IV+ K + +V+ + VK+G + +D VLCDTSGRL +LM
Sbjct: 180 IEQLNQWAKLLNCDIVLP-NPKEQTPAVIFRGVKKGIDDKYDFVLCDTSGRLQNKLNLMN 238
Query: 274 ELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGG 333
EL + + KV P+E LLVLDGT G L QA+ FN+ +TG++LTK+DGSA+GG
Sbjct: 239 ELQKIYQIIQKVSGSEPSETLLVLDGTVGQTGLSQAKVFNEFSKLTGIVLTKMDGSAKGG 298
Query: 334 CVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 367
++++ D +PVK +G GE DL FD E +V
Sbjct: 299 IILAIKDMFNLPVKLIGFGEKTSDLAIFDLEKYV 332
>sp|Q92GB8|FTSY_RICCN Signal recognition particle receptor FtsY OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=ftsY PE=3 SV=1
Length = 303
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 150/257 (58%), Gaps = 10/257 (3%)
Query: 113 SDFGPRITIKIVESLRDDILAGKLKSGPDI-KDALKNSVLDLLTKKGNKTEL--QLGYRK 169
SD + I+E + K+K +I D +K ++ L+ ++ +K+ + L K
Sbjct: 47 SDMSVLVVTNIIEEFK------KVKFDKEIDSDTVKEALAKLIEQQLSKSAIPFTLSENK 100
Query: 170 PAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIV 229
V+L+ GVNG GKTT++GKLA +G K+ +AA DTFRAAA +QL WA+R ++
Sbjct: 101 LNVILVCGVNGAGKTTTIGKLASMYSAQGKKVAVAACDTFRAAAVNQLSTWADRANALLI 160
Query: 230 VAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGA 289
E E A +SV + ++ +Q DI+ DT+GRLH +LM+EL K + K+ A
Sbjct: 161 TGE-ESADPASVAYRGMEESIKQNIDILFIDTAGRLHNKKNLMDELSKIVKVIKKLDENA 219
Query: 290 PNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFV 349
P +LV+D TG N Q FND +TGLI+TKLDGSA+ G +V VV + +P+ F+
Sbjct: 220 PTHSVLVIDAITGQNTYNQVEHFNDATNLTGLIVTKLDGSAKAGVIVGVVQKFNLPLYFI 279
Query: 350 GVGEGVEDLQPFDAEAF 366
G+GE +EDL+ F+ F
Sbjct: 280 GIGEKIEDLKIFNQHDF 296
>sp|Q1RKK5|FTSY_RICBR Signal recognition particle receptor FtsY OS=Rickettsia bellii
(strain RML369-C) GN=ftsY PE=3 SV=1
Length = 303
Score = 181 bits (458), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/258 (39%), Positives = 149/258 (57%), Gaps = 4/258 (1%)
Query: 113 SDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAV 172
+D G + KI+E + ++++ +IK+ L N + L + ++ L K V
Sbjct: 47 TDMGSLVAAKIIEDFKSLKFDKEVET-TEIKETLANLIEQQLLE--SEIPFTLNENKLNV 103
Query: 173 VLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAE 232
VL+ GVNG GKTT++GKLA +G K+ +AA DTFRAAA +QL+ W R ++ E
Sbjct: 104 VLVCGVNGAGKTTTIGKLAAMYGMQGKKVAVAACDTFRAAAVNQLDSWVTRAKALLITGE 163
Query: 233 GEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNE 292
E A +SV +AV+ +Q DI+ DT+GRLH +LM+EL K + KV P
Sbjct: 164 -EAADPASVAYRAVEESIKQDIDILFIDTAGRLHNKKNLMDELTKIVKVIKKVDENLPTH 222
Query: 293 ILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVG 352
+LV+D TG N Q FND +TGLI+TKLDGSA+ G +V VV +P+ F+G+G
Sbjct: 223 SVLVIDAITGQNTYNQVEHFNDATNLTGLIVTKLDGSAKAGVIVGVVQRFNLPIYFIGIG 282
Query: 353 EGVEDLQPFDAEAFVNAI 370
E +EDL+ F+ F ++
Sbjct: 283 EQIEDLKIFNRHDFAKSL 300
>sp|O05948|FTSY_RICPR Signal recognition particle receptor FtsY OS=Rickettsia prowazekii
(strain Madrid E) GN=ftsY PE=3 SV=1
Length = 303
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/256 (37%), Positives = 148/256 (57%), Gaps = 8/256 (3%)
Query: 113 SDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTEL--QLGYRKP 170
SD + I+E ++ + S D +K ++ L+ ++ +K+E+ L K
Sbjct: 47 SDISISVVTHIIEEFKNVKFDKTIDS-----DTVKEAIAKLIEQQLSKSEIPFTLSENKL 101
Query: 171 AVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVV 230
++L+ GVNG GKTT++GKL+ EG K+ +AA DTFRAAA +QL W R ++
Sbjct: 102 NIILVCGVNGVGKTTTIGKLSALYSAEGKKVAVAACDTFRAAAINQLSSWVHRANALLIT 161
Query: 231 AEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAP 290
+ A +SV +A++ +Q DI+ DT+GRLH N +LM+EL K + K+ AP
Sbjct: 162 GKAS-ADPASVAYRAIEESIKQNIDILFIDTAGRLHNNKNLMDELSKIVKVIKKLDENAP 220
Query: 291 NEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVG 350
+L++D TG N Q FNDV +TGLI+TKLDGSA+ G +V V + +PV F+G
Sbjct: 221 THSILIIDAITGQNTYNQIEYFNDVTNLTGLIVTKLDGSAKAGVLVGAVQKFNLPVYFIG 280
Query: 351 VGEGVEDLQPFDAEAF 366
+GE +EDL+ F+ F
Sbjct: 281 IGEKIEDLKIFNRHDF 296
>sp|D3UJA7|FTSY_HELM1 Signal recognition particle receptor FtsY OS=Helicobacter mustelae
(strain ATCC 43772 / LMG 18044 / NCTC 12198 / 12198)
GN=ftsY PE=3 SV=1
Length = 292
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/266 (36%), Positives = 160/266 (60%), Gaps = 9/266 (3%)
Query: 106 LEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQL 165
LEE L+ +D + ++++ L +I +L+ G D + S D ++ K T
Sbjct: 29 LEEVLIEADVDYEVIEQLLQHLPQNITRNQLEVGLD-RFFRGESYYDKVSLKDIPT---- 83
Query: 166 GYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTG 225
KP V LI+GVNG GKTT++ KLA R K+ G K+L+ AGDTFRAAA DQL++W+E+
Sbjct: 84 ---KPLVELIIGVNGAGKTTTIAKLAKRYKDSGKKVLLGAGDTFRAAAIDQLKLWSEKIS 140
Query: 226 CEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKV 285
+I+ + + S++ + G + D ++ DT+GRLH +L EL+ + K
Sbjct: 141 VDIISTQ-YGSDPSALAYDTINAGSARKMDHIIIDTAGRLHNQTNLKNELLKITRVCSKA 199
Query: 286 VNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIP 345
+N P +L+LDGT G + + QA+ F++++ + G+ILTKLDG+++GG ++S++ L +P
Sbjct: 200 LNNEPYRKILILDGTQGSSSINQAKIFHEMLKVDGVILTKLDGTSKGGAILSIIHALKLP 259
Query: 346 VKFVGVGEGVEDLQPFDAEAFVNAIF 371
+ +GVGE EDL FD + F+N +
Sbjct: 260 IIAIGVGERAEDLLDFDQKDFINKLL 285
>sp|Q9Z6T7|FTSY_CHLPN Signal recognition particle receptor FtsY OS=Chlamydia pneumoniae
GN=ftsY PE=3 SV=1
Length = 290
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 152/274 (55%), Gaps = 14/274 (5%)
Query: 102 VLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDA----LKNSVLDLLTKK 157
++++ E +DFG +T ++ LR K IKD L+ S+ L ++
Sbjct: 21 LIEDAESLFYEADFGTELTEELCARLRRT----KKADASTIKDLITVLLRESLEGLPSQA 76
Query: 158 GNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQL 217
++ +P V L++G NG GKTT+ KLA+ K +++ A DTFRAA DQ
Sbjct: 77 SQSSQ-----TRPIVSLLLGTNGSGKTTTAAKLAHYYKERSESVMLVATDTFRAAGMDQA 131
Query: 218 EIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVA 277
+WA GC V + A+++ ++ +G+ V+ DTSGRLH + +LM+EL
Sbjct: 132 RLWANELGCGFVSGQ-PGGDAAAIAFDGIQSAIARGYSRVIIDTSGRLHVHGNLMKELSK 190
Query: 278 CKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVS 337
GK + GAP+EI + +D T G N + Q R F+DVV ++GLI TK+DGSA+GG +
Sbjct: 191 IVSVCGKALEGAPHEIFMTVDSTLGNNAIEQVRVFHDVVPLSGLIFTKVDGSAKGGTLFQ 250
Query: 338 VVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
+ L IP KF+G GE ++DL FD + F+N +F
Sbjct: 251 IAKRLKIPTKFIGYGESLKDLNEFDLDLFLNKLF 284
>sp|Q8TIN7|FTSY_METAC Signal recognition particle receptor FtsY OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=ftsY PE=3 SV=1
Length = 417
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 169/287 (58%), Gaps = 14/287 (4%)
Query: 92 LYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLK-----SGPDIKDAL 146
+Y + D ++ L ELE LL SD ++ IVES+++ L G K +G ++ AL
Sbjct: 138 VYLDNKDLEEPLWELEMGLLESDLALSVSEAIVESVKNQ-LTGTTKRIGSNTGEIVEAAL 196
Query: 147 KNSVLDLLTKKGNKTELQLGYR-KPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAA 205
K ++L++++ + + R KP ++ VG+NG GKTTS+ K+ RL G +++AA
Sbjct: 197 KKAILEVVSANTFDFDEYVKNREKPVHIVFVGINGTGKTTSISKITNRLLKSGYSVVLAA 256
Query: 206 GDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRL 265
GDTFRA A DQL I A R G +++ + A ++V+ AV+ K D VL DT+GR+
Sbjct: 257 GDTFRAGAIDQLGIHANRLGVKMIKHQA-GADPAAVIYDAVQYAKAHKIDFVLSDTAGRM 315
Query: 266 HTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTK 325
HTN +LM ++ + + +V P+ I+ V + G + + +A +FN+ V I G ILTK
Sbjct: 316 HTNMNLMAQM----EKICRV--STPDLIIFVDEAVAGNDAVERAAQFNEAVPIDGSILTK 369
Query: 326 LDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS 372
+D A+GG +S+ G P+ F G+G+G EDL+ FD E FV+ +F+
Sbjct: 370 IDADAKGGAAISIAYITGKPILFFGIGQGYEDLKKFDPEWFVDQLFN 416
>sp|Q57739|FTSY_METJA Signal recognition particle receptor FtsY OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=ftsY PE=3 SV=1
Length = 409
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 166/271 (61%), Gaps = 25/271 (9%)
Query: 114 DFGPRITIKIVESLRDDILAGKLKSGPDIKD----ALKNSVLDLLTK---------KGNK 160
D + K++E+++++++ K+ ++++ A+KN++ ++L++ K NK
Sbjct: 138 DVALEVVEKLIENIKNELVGRKISPDDNVEEITINAVKNAIKNILSQEKIDIEEIIKKNK 197
Query: 161 TELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIW 220
E KP V++ VG+NG GKTT++ KLAY+LK +G +++AAGDTFRA A +QLE
Sbjct: 198 AE-----GKPTVIVFVGINGTGKTTTIAKLAYKLKQKGYSVVLAAGDTFRAGAIEQLEQH 252
Query: 221 AERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKK 280
A+ G + V+ A +++V+ A++ K +G D+VL DT+GR TN +LMEE+ K
Sbjct: 253 AKNVGVK-VIKHKPGADSAAVIYDAIQHAKARGIDVVLADTAGRQATNVNLMEEI----K 307
Query: 281 AVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVD 340
V +V P+ ++ V D TG + + QA EFN V I G+ILTK+D A+GG +S+
Sbjct: 308 KVVRVTK--PDLVIFVGDALTGNDAVYQAEEFNRAVNIDGIILTKVDADAKGGAALSIGY 365
Query: 341 ELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
+G P+ ++GVG+ +DL FDA+ V +F
Sbjct: 366 AIGKPILYLGVGQRYQDLIEFDADWMVRKLF 396
>sp|P27414|FTSY_SULAC Signal recognition particle receptor FtsY OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=ftsY PE=3 SV=1
Length = 369
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/284 (38%), Positives = 164/284 (57%), Gaps = 18/284 (6%)
Query: 98 DTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKD----ALKNSVLDL 153
D + V++EL LL SD +T KI+E L+++++ K+ ++++ LK S+ ++
Sbjct: 94 DLNDVIEELRFQLLDSDVSYEVTEKILEDLKNNLIGKKVSRREEVEEIVINTLKKSITEI 153
Query: 154 LTKKGNKTELQLGYR----KPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTF 209
LTK KT+L R KP V++ GVNG GKTT++ K+ LK ++AA DTF
Sbjct: 154 LTK-NQKTDLIEKIRSSGKKPFVIIFFGVNGVGKTTTIAKVVNMLKKNNLSTIIAASDTF 212
Query: 210 RAAASDQLEIWAERTGCEIVVAEGEK-AKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTN 268
RAAA +QL A + E+ + G+ A +SV A+ K + D+VL DT+GR+H +
Sbjct: 213 RAAAQEQLAYHASK--LEVQLIRGKYGADPASVAFDAISFAKSRNIDVVLIDTAGRMHID 270
Query: 269 YSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDG 328
L+EEL K V ++ P+ +L+LD G + L QAR F + VG +ILTK+D
Sbjct: 271 SDLVEEL----KRVLRI--AKPDFRILILDSLAGSDALEQARHFENNVGYDAVILTKVDA 324
Query: 329 SARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS 372
A+GG +S+ EL PV ++GVG+ +DL PF + FV IFS
Sbjct: 325 DAKGGIALSLAYELKKPVVYMGVGQNYDDLIPFSPDWFVERIFS 368
>sp|P73930|FTSY_SYNY3 Signal recognition particle receptor FtsY OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsY PE=3 SV=1
Length = 504
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 175/309 (56%), Gaps = 15/309 (4%)
Query: 72 KIFSGFSKTRDNL-----AVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVES 126
K+ G SKTR NL +++ + L + ++E+E LL +D G T I+ +
Sbjct: 202 KLRQGLSKTRVNLVNQLKSIVGQGPL------NEAAVEEIEAILLQADVGVEATDYIITT 255
Query: 127 LRDDILAGKLKSGPDI---KDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGK 183
L+D + L I K+ L+ S+LD E V L+ GVNG GK
Sbjct: 256 LQDKLREEALPPEQAIEFLKEILR-SILDRPLLSLPSAEFAPEAEGLNVWLLTGVNGAGK 314
Query: 184 TTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLS 243
TT++GKLA+ K G ++AA DTFRAAA +Q+++W ER+G ++ G+ ++V+
Sbjct: 315 TTTIGKLAFMAKQSGYDCVIAAADTFRAAAVEQVKVWGERSGVPVIANPGQNTDPAAVVY 374
Query: 244 QAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGL 303
+ + + +++L DT+GRL +LM+EL ++ + K A E LLVLD T G
Sbjct: 375 DGISAAQSRNVNLLLVDTAGRLQNKKNLMDELAKIRRIIDKKAPNATVESLLVLDATLGQ 434
Query: 304 NMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDA 363
N L QA F + ++G++LTKLDGSA+GG ++V +L +P++F+G GEG+EDL+PF +
Sbjct: 435 NGLRQAEVFAEAAKLSGVVLTKLDGSAKGGVALAVAQQLNLPIRFIGAGEGIEDLRPFSS 494
Query: 364 EAFVNAIFS 372
FV A+ +
Sbjct: 495 YEFVEALLN 503
>sp|O25458|FTSY_HELPY Signal recognition particle receptor FtsY OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ftsY PE=3 SV=1
Length = 293
Score = 166 bits (419), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 135/217 (62%), Gaps = 5/217 (2%)
Query: 159 NKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLE 218
+KT L+ KP V LIVGVNG GKTT++ KLA + K L+ AGDTFRAAA QL+
Sbjct: 75 DKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQ 134
Query: 219 IWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVAC 278
+W E+ +++ A+ E + SS+ ++ + D V DT+GRLH +L EL
Sbjct: 135 LWGEKLNIQVISAK-EGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKI 193
Query: 279 KKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSV 338
+ KV+ AP L+LDGT G + L QA+ F++ + + G+I+TKLDG+++GG ++SV
Sbjct: 194 ARTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSV 253
Query: 339 VDELGIPVKFVGVGEGVEDLQPFDAEAF----VNAIF 371
+ EL +P+ ++G+GE +DL FD E F V+A+F
Sbjct: 254 LYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVF 290
>sp|Q9ZK62|SRP54_HELPJ Signal recognition particle protein OS=Helicobacter pylori (strain
J99) GN=ffh PE=3 SV=1
Length = 448
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 160/268 (59%), Gaps = 10/268 (3%)
Query: 100 DKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGN 159
D+ LDEL++ LL +D ++ ++++ + AG + DAL+ S+L++L+ KG+
Sbjct: 26 DRALDELKKTLLKNDVHHKVARELLKKVESQTKAGGI-GKQQFLDALEKSLLEILSAKGS 84
Query: 160 KTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEI 219
+ P VVL+ G+ G GKTT+ KLA+ LK + K+L+ A D R AA +QL++
Sbjct: 85 -SGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKTKNKKVLLCACDLQRLAAVEQLKV 143
Query: 220 WAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACK 279
E+ G E+ E + K + + A+KR KE FD+++ D++GRL + LM+EL
Sbjct: 144 LGEQVGVEVFHEENKSVK--EIANNALKRAKEAQFDVLIVDSAGRLAIDKELMQEL---- 197
Query: 280 KAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVV 339
K V +V+N P+E+L V D +G + + A FN+ +G++G++L+K D ++GG + +
Sbjct: 198 KEVKEVLN--PHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGIT 255
Query: 340 DELGIPVKFVGVGEGVEDLQPFDAEAFV 367
+LG+P++F+G GE + DL F E V
Sbjct: 256 YQLGLPLRFIGSGEKIPDLDVFMPERIV 283
>sp|Q9ZL80|FTSY_HELPJ Signal recognition particle receptor FtsY OS=Helicobacter pylori
(strain J99) GN=ftsY PE=3 SV=1
Length = 293
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 134/217 (61%), Gaps = 5/217 (2%)
Query: 159 NKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLE 218
+KT L+ KP V LIVGVNG GKTT++ KLA + K L+ AGDTFRAAA QL+
Sbjct: 75 DKTRLKTITTKPLVHLIVGVNGAGKTTTIAKLAKLSLKQHKKALLGAGDTFRAAAVKQLQ 134
Query: 219 IWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVAC 278
+W E+ +++ A+ E + SS+ ++ + D V DT+GRLH +L EL
Sbjct: 135 LWGEKLNVQVISAK-EGSDPSSLAYNTIESAIAKNIDEVFIDTAGRLHNQTNLKNELSKI 193
Query: 279 KKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSV 338
KV+ AP L+LDGT G + L QA+ F++ + + G+I+TKLDG+++GG ++SV
Sbjct: 194 AHTCSKVLKDAPFYKFLILDGTQGSSGLTQAKIFHETLALDGVIMTKLDGTSKGGAILSV 253
Query: 339 VDELGIPVKFVGVGEGVEDLQPFDAEAF----VNAIF 371
+ EL +P+ ++G+GE +DL FD E F V+A+F
Sbjct: 254 LYELKLPILYLGMGEKEDDLIAFDEERFIEDLVDAVF 290
>sp|Q9HJ93|FTSY_THEAC Signal recognition particle receptor FtsY OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=ftsY PE=3 SV=1
Length = 288
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 161/275 (58%), Gaps = 16/275 (5%)
Query: 98 DTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGP--DIKDALKNSVLDLLT 155
D D+V DE+ L+ +D ++++ E L ++ KLK D + L +S+L+++
Sbjct: 19 DPDEVADEIPLKLVEAD----VSLEAAEDLAS-LVRNKLKEDTTLDPNEVLSSSILEMMP 73
Query: 156 KKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASD 215
+ K ++ +KP VVL +G+NG GKTT++GK A+ LK G +++AA DTFRA A +
Sbjct: 74 EY--KFDVLNVNKKPFVVLFLGINGTGKTTTIGKFAHYLKRNGKSVVIAAADTFRAGAIE 131
Query: 216 QLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEEL 275
Q+ + G E V+ + SSV A++ + + D VL DT+GR++TN +L++E+
Sbjct: 132 QISLIGREAGTE-VIRHDRGSDPSSVAFDAIEHARARNIDYVLIDTAGRMNTNKNLLDEM 190
Query: 276 VACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCV 335
K+ P+ LLV+D +G + + QAR F + VG G+I+TKLD ARGG +
Sbjct: 191 KKIKRV------SKPDLTLLVIDAVSGQDSVNQARMFEENVGYDGVIVTKLDTDARGGSI 244
Query: 336 VSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAI 370
+S+ +L PV FV G+G++D+ PFD +V +
Sbjct: 245 LSIYHDLKKPVLFVCTGQGLDDIMPFDRNWYVRKL 279
>sp|P56005|SRP54_HELPY Signal recognition particle protein OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=ffh PE=3 SV=1
Length = 448
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/271 (36%), Positives = 159/271 (58%), Gaps = 16/271 (5%)
Query: 100 DKVLDELEEALLVSDFGPRIT---IKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTK 156
D+ LDEL++ LL +D ++ +K VES GK DAL+ S+L++L+
Sbjct: 26 DRALDELKKTLLKNDVHHKVARELLKKVESQTKLNGIGK----QQFLDALEKSLLEILSA 81
Query: 157 KGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQ 216
KG+ + P VVL+ G+ G GKTT+ KLA+ LK + K+L+ A D R AA +Q
Sbjct: 82 KGS-SGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKTKNKKVLLCACDLQRLAAVEQ 140
Query: 217 LEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELV 276
L++ E+ G E+ E + K + S A+KR KE FD++L D++GRL + LM+EL
Sbjct: 141 LKVLGEQVGVEVFYEENKSVK--EIASNALKRAKEAQFDVLLVDSAGRLAIDKELMQEL- 197
Query: 277 ACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVV 336
K V +++N P+E+L V D +G + + A FN+ +G++G++L+K D ++GG +
Sbjct: 198 ---KEVKEILN--PHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIAL 252
Query: 337 SVVDELGIPVKFVGVGEGVEDLQPFDAEAFV 367
+ +LG+P++F+G GE + DL F E V
Sbjct: 253 GITYQLGLPLRFIGSGEKIPDLDVFVPERIV 283
>sp|Q55311|SRP54_SYNE7 Signal recognition particle protein OS=Synechococcus elongatus
(strain PCC 7942) GN=ffh PE=3 SV=1
Length = 485
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 151/278 (54%), Gaps = 11/278 (3%)
Query: 97 ADTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTK 156
++ + L E+ ALL +D + + + +++ + ++ SG V D L +
Sbjct: 25 SNVQEALKEVRRALLEADVNLGVVKEFIAQVQEKAVGTQVISGIRPDQQFIKVVYDELVQ 84
Query: 157 KGNKTELQLGY--RKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAAS 214
+T + L + P V+L+ G+ G GKTT+ KLA L+ EG L+ A D +R AA
Sbjct: 85 VMGETHVPLAQAAKAPTVILMAGLQGAGKTTATAKLALHLRKEGRSTLLVATDVYRPAAI 144
Query: 215 DQLEIWAERTGCEIVVAE-GEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLME 273
DQL ++ ++ V E G A + Q V++ +++G D V+ DT+GRL + +ME
Sbjct: 145 DQLITLGKQ--IDVPVFELGSDANPVEIARQGVEKARQEGIDTVIVDTAGRLQIDTEMME 202
Query: 274 ELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGG 333
EL K+A+ AP+E+LLV+D G R F++ +GITG ILTKLDG +RGG
Sbjct: 203 ELAQVKEAI------APHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGG 256
Query: 334 CVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
+S+ G P+KFVG+GE VE LQPF E + I
Sbjct: 257 AALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASRIL 294
>sp|P37107|SR54C_ARATH Signal recognition particle 54 kDa protein, chloroplastic
OS=Arabidopsis thaliana GN=FFC PE=1 SV=1
Length = 564
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 152/286 (53%), Gaps = 12/286 (4%)
Query: 88 DELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALK 147
+E+L N+A+ + ++ ALL +D + + V+S+ D + + G L
Sbjct: 95 EEVLTKDNIAEP---MRDIRRALLEADVSLPVVRRFVQSVSDQAVGMGVIRGVKPDQQLV 151
Query: 148 NSVLDLLTK--KGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAA 205
V D L K G +ELQ P V+L+ G+ G GKTT KLA LK +G ++ A
Sbjct: 152 KIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGKSCMLIA 211
Query: 206 GDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRL 265
GD +R AA DQL I E+ G + A G K + + Q +K K+ D+V+ DT+GRL
Sbjct: 212 GDVYRPAAIDQLVILGEQVGVPVYTA-GTDVKPADIAKQGLKEAKKNNVDVVIMDTAGRL 270
Query: 266 HTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTK 325
+ +M+EL K V K +N P E+LLV+D TG FN +GITG ILTK
Sbjct: 271 QIDKGMMDEL----KDVKKFLN--PTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTK 324
Query: 326 LDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
LDG +RGG +SV + G P+K VG GE +EDL+PF + I
Sbjct: 325 LDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRIL 370
>sp|C5A233|SRP54_THEGJ Signal recognition particle 54 kDa protein OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=srp54 PE=3 SV=1
Length = 448
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/272 (34%), Positives = 156/272 (57%), Gaps = 8/272 (2%)
Query: 101 KVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNK 160
+V+ +++ AL+ SD R+ +++ + +++ L K +G ++ + V + LTK K
Sbjct: 30 EVVRDIQRALIQSDVNVRLVLQLTKRIQERALNEKPPAGVSPREHVIKIVYEELTKLLGK 89
Query: 161 TELQLGYR-KPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEI 219
+ L R KP ++L VG+ G GKTT++ KLA L+ G K+ + DT+R A QL+
Sbjct: 90 EAVPLEIREKPTILLTVGIQGSGKTTTIAKLARHLQKRGYKVGLVCTDTWRPGAYYQLKQ 149
Query: 220 WAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACK 279
E E+ GEK A + + V+ K++G D+++ DT+GR L+EE+
Sbjct: 150 LVEPYNIEVFGDPGEK-DAIKLAREGVEYFKDKGVDVIIVDTAGRHKEESGLIEEMKQIS 208
Query: 280 KAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVV 339
+A+ P+E++LV+DGT G QA F + I +I+TKLDGSA+GG +S V
Sbjct: 209 EAI------KPHEVILVIDGTIGQQAYHQALAFKEATPIGSIIVTKLDGSAKGGGALSAV 262
Query: 340 DELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
G P+KF+GVGE ++DL+PFD + FV+ +
Sbjct: 263 AATGAPIKFIGVGEKIDDLEPFDPKRFVSRLL 294
>sp|O67615|SRP54_AQUAE Signal recognition particle protein OS=Aquifex aeolicus (strain
VF5) GN=ffh PE=3 SV=1
Length = 454
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/278 (36%), Positives = 158/278 (56%), Gaps = 18/278 (6%)
Query: 98 DTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGK----LKSGPDIKDALKNSVLDL 153
+ ++ L E+ ALL +D ++ ++ +R+ ++ + L + + ++D+
Sbjct: 26 NINQTLREIRLALLEADVDYQVAKDFIKRIREKVVGKEVPKNLSPAEFVIKTVYEELVDI 85
Query: 154 LTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAA 213
L G K +L+ G VL VG+ G GKTT++GK+A LK G K+ +++ D R AA
Sbjct: 86 LG--GEKADLKKG-----TVLFVGLQGTGKTTTIGKIANLLKKGGHKVAVSSTDLRRPAA 138
Query: 214 SDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLME 273
QL+ AER G E E A + +AVKR KE+ D +L DT+GRLH + LM+
Sbjct: 139 MLQLQRLAERVGVPYYEFE-EGLGAVEIARRAVKRAKEESVDYLLLDTAGRLHVDEELMK 197
Query: 274 ELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGG 333
EL K+ V N P+EIL V D G L A+ F++ +G+TG+++TK+DG ARGG
Sbjct: 198 ELQEIKE----VTN--PSEILYVADAMQGQTALETAKTFHERLGLTGVVITKMDGDARGG 251
Query: 334 CVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
+SV + LG+P+KF+GVGE +ED++PF + I
Sbjct: 252 LALSVKEVLGVPIKFIGVGEKIEDIEPFYPDRIAQRIL 289
>sp|P75054|SRP54_MYCPN Signal recognition particle protein OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=ffh PE=3 SV=1
Length = 450
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 158/279 (56%), Gaps = 17/279 (6%)
Query: 98 DTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDAL----KNSVLDL 153
D VL E+ ALL +D + ++++R+ + ++ G D++ L K ++++
Sbjct: 27 DVQAVLKEIRIALLDADVNLLVVKNFIKAIREQTVGQTVEPGQDLQKWLLKVIKQELINI 86
Query: 154 LTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNE-GAKILMAAGDTFRAA 212
L++ ++ ++P V++VG+ G GKTT+ GKLA LK + K ++ A D +R A
Sbjct: 87 LSQPNQ----EITSKRPLKVMVVGLQGSGKTTTCGKLAVWLKKQFQQKAMLVALDIYRPA 142
Query: 213 ASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLM 272
A DQL AE+T + A+G +A + +AVK KE G ++CDT+GRL TN LM
Sbjct: 143 AIDQLATLAEQTES-VFFAKGTQAPDQTT-KEAVKTFKESGCQAIICDTAGRLQTNQELM 200
Query: 273 EELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARG 332
+ELVA K + P+EIL+V+DG +G ++ A+EF++ + +TG I+TKLD AR
Sbjct: 201 DELVAIKNELH------PDEILMVVDGLSGQEIINVAKEFHNRLKLTGFIITKLDSDARA 254
Query: 333 GCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
G +S+ L +P+K +G E + L+ F E + I
Sbjct: 255 GAALSLTSLLEVPIKLMGTSEKLTGLEQFHPERIASRIL 293
>sp|B6YSS1|SRP54_THEON Signal recognition particle 54 kDa protein OS=Thermococcus
onnurineus (strain NA1) GN=srp54 PE=3 SV=1
Length = 448
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 154/279 (55%), Gaps = 14/279 (5%)
Query: 97 ADTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTK 156
A +V+ +++ AL+ +D R+ + + + + L + +G K+ + V + LTK
Sbjct: 26 ATIKEVVRDIQRALIQADVNVRLVLDLTKRIEKRALEEEPPTGVSKKEHIIKIVYEELTK 85
Query: 157 ----KGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAA 212
+ E++ KP V+L VG+ G GKTTS+ KLA + G K+ + DT+R
Sbjct: 86 FLGTEAKPIEIK---EKPTVLLTVGIQGSGKTTSIAKLARYFQKRGYKVGLVCSDTWRPG 142
Query: 213 ASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLM 272
A QL+ E G E V + E+ A + + V+ +E+G DI++ D++GR SL+
Sbjct: 143 AYQQLKQLVEPFGIE-VFGDPEEKDAIKLAKEGVEHFREKGVDIIIVDSAGRHKEEKSLI 201
Query: 273 EELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARG 332
EE+ A+ P+E++LV+DGT G QA F + I +I+TKLDGSA+G
Sbjct: 202 EEMKQISAAI------KPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKG 255
Query: 333 GCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
G +S V G P+KF+GVGE ++DL+PFD + FV+ +
Sbjct: 256 GGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRLL 294
>sp|Q92J55|SRP54_RICCN Signal recognition particle protein OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=ffh PE=3 SV=1
Length = 449
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 154/280 (55%), Gaps = 13/280 (4%)
Query: 97 ADTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGK-LKS---GPDIKDALKNSVLD 152
A D + ++ ALL SD + + ++ L + +KS G I + +++
Sbjct: 25 AQIDAAMRDIRVALLESDVALPVIKDFIAEVKQKALGQEVIKSVSPGQMIIKIIHEEMIN 84
Query: 153 LLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAA 212
LL ++T+L L + P L+VG+ G GKTT+ KLA RL+N+ K+L+ + DT+R A
Sbjct: 85 LLASSKSETKLNLNSKPPVNFLMVGLQGSGKTTASSKLALRLRNQNKKVLLVSLDTYRPA 144
Query: 213 ASDQLEIWAERTGCE-IVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSL 271
A +QL I A + + +GEK ++ +A+ K +D+V+ DT+GR + ++
Sbjct: 145 AQEQLAILANSVQINSLPIVQGEKP--LDIVKRAIAEAKISAYDVVIYDTAGRTQIDKAM 202
Query: 272 MEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSAR 331
MEE +A KK V P E LLV+D TG + + A FN+ + I+GLIL+++DG ++
Sbjct: 203 MEEALAIKKIV------EPTETLLVIDSMTGQDAVVTASSFNEKLAISGLILSRIDGDSK 256
Query: 332 GGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
GG +SV P+KF+ GE + DL+ FDAE + I
Sbjct: 257 GGAALSVKYITKKPIKFLSSGENLIDLEEFDAERLASRIL 296
>sp|Q57565|SRP54_METJA Signal recognition particle 54 kDa protein OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=srp54 PE=1 SV=1
Length = 451
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 159/275 (57%), Gaps = 15/275 (5%)
Query: 102 VLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTK--KGN 159
V+ +++ AL+ +D ++ +K+ + + L K G K+ + V + L K
Sbjct: 30 VIKDIQRALIQADVNVKLVLKMSKEIERRALEEKTPKGLSKKEHIIKIVYEELVKLLGEE 89
Query: 160 KTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEI 219
+L+L +K V+L+VG+ G GKTT+ KLA ++ G K + A DT+R AA +QL+
Sbjct: 90 AKKLELNPKKQNVILLVGIQGSGKTTTAAKLARYIQKRGLKPALIAADTYRPAAYEQLKQ 149
Query: 220 WAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQ--GFDIVLCDTSGRLHTNYSLMEELVA 277
AE+ I G++ + S + VK G E+ D+++ DT+GR L+EE+
Sbjct: 150 LAEKIHVPIY---GDETRTKSPVD-IVKEGMEKFKKADVLIIDTAGRHKEEKGLLEEM-- 203
Query: 278 CKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVG-ITGLILTKLDGSARGGCVV 336
K + ++ N P+EI+LV+DGT G QA+ F + VG I +I+TKLDGSA+GG +
Sbjct: 204 --KQIKEITN--PDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGAL 259
Query: 337 SVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
S V E P+KF+G+GEG++DL+PFD + F++ +
Sbjct: 260 SAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLL 294
>sp|Q9ZDZ0|SRP54_RICPR Signal recognition particle protein OS=Rickettsia prowazekii
(strain Madrid E) GN=ffh PE=3 SV=1
Length = 449
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 157/277 (56%), Gaps = 13/277 (4%)
Query: 100 DKVLDELEEALLVSDFGPRITIKIVESLRDDILAGK-LKS---GPDIKDALKNSVLDLLT 155
D + ++ ALL SD + +E ++ L + +KS G I + +++LL
Sbjct: 28 DTAMRDVRVALLESDVALPVIKGFIEEVKQKALGQEVIKSVSPGQMIIKIIHEEMINLLA 87
Query: 156 KKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASD 215
+ T+L L + P +LIVG+ GGGKTT+ GKLA RLKN+ K+L+ + DT+R AA +
Sbjct: 88 STESTTKLNLNAKPPVNLLIVGLQGGGKTTASGKLALRLKNQNKKVLLVSLDTYRPAAQE 147
Query: 216 QLEIWAERTGCE-IVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEE 274
QL I A + + + +GE K ++ +A+ + +D+V+ DT+GR+ + +MEE
Sbjct: 148 QLAIIANSVNIDSLPIVKGE--KPLDIVKRAIGEAQISAYDVVIYDTAGRIQIDNVMMEE 205
Query: 275 LVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGC 334
+A KK + P E LLV+D TG + + A+ F++ + I+GLIL+++DG +GG
Sbjct: 206 ALAIKKILN------PTETLLVIDSMTGQDAVITAKTFSEKLEISGLILSRIDGDTKGGA 259
Query: 335 VVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIF 371
+SV P+KF+ GE + DL+ F+AE + I
Sbjct: 260 ALSVKYFTQKPIKFLSSGEKLTDLEEFNAERLASRIL 296
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,834,117
Number of Sequences: 539616
Number of extensions: 5993306
Number of successful extensions: 24853
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 24325
Number of HSP's gapped (non-prelim): 308
length of query: 372
length of database: 191,569,459
effective HSP length: 119
effective length of query: 253
effective length of database: 127,355,155
effective search space: 32220854215
effective search space used: 32220854215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)