Citrus Sinensis ID: 017380

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370--

MAMASATPTRLPLISKHTSFYLTNCLPQTRFSHCTAIRPATNRFKCSAGGQTGFFTRLGRLIKEKAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS

cccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEECcccccccHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHHccccEEccccccccHHHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHHHHHHHHccccccccEEEEEEEccccccHHHHHHHHHHHccccEEEEEcccccccccEEEEEcccccccEEEEEccccccccccccHHHHHHHHcc

*****************TSFYLT**LPQTRFSHCT*IRPATNRFKCSAGGQTGFFTRLGRLIKEKAKSDVEKIFSGFSKTRDNLAVIDELLLYWNLADTDKVLDELEEALLVSDFGPRITIKIVESLRDDILAGKLKSGPDIKDALKNSVLDLLTKKGNKTELQLGYRKPAVVLIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAEGEKAKASSVLSQAVKRGKEQGFDIVLCDTSGRLHTNYSLMEELVACKKAVGKVVNGAPNEILLVLDGTTGLNMLPQAREFNDVVGITGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFS

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Cell division protein FtsY homolog, chloroplastic	Signal recognition particle receptor protein. Binds GTP specifically. The GTPase activity is inhibited by the N-terminus of the protein until binding to the thylakoid membrane. Activates the GTPase activity of FFC/cpSRP54 when bound to the cpSRP complex. Required for light-harvesting chlorophyll a/b-binding protein (LHCP) integration into thylakoids. Might be also functionally linked to the Sec translocation machinery.	confident	O80842
Signal recognition particle receptor FtsY	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).	probable	P75362
Signal recognition particle receptor FtsY	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).	probable	P47539

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2OG2, chain A
Confidence level:very confident
Coverage over the Query: 68-372
View the alignment between query and template
View the model in PyMOL