Query 017381
Match_columns 372
No_of_seqs 149 out of 1865
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 13:30:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017381.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017381hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.9 1.1E-21 3.8E-26 177.9 27.1 256 64-357 12-290 (306)
2 1zgk_A Kelch-like ECH-associat 99.9 1E-20 3.6E-25 171.8 27.5 253 65-355 26-303 (308)
3 2xn4_A Kelch-like protein 2; s 99.9 4.7E-20 1.6E-24 166.9 29.6 241 76-354 30-292 (302)
4 4asc_A Kelch repeat and BTB do 99.9 5.3E-20 1.8E-24 167.6 27.7 237 76-349 13-287 (315)
5 2vpj_A Kelch-like protein 12; 99.9 2.3E-20 7.7E-25 168.8 23.9 241 76-354 31-293 (301)
6 2woz_A Kelch repeat and BTB do 99.9 1.5E-19 5.2E-24 164.8 28.4 231 78-345 26-293 (318)
7 3ii7_A Kelch-like protein 7; p 99.8 3.5E-17 1.2E-21 148.2 25.0 203 120-355 23-241 (306)
8 2xn4_A Kelch-like protein 2; s 99.8 3.3E-17 1.1E-21 148.1 24.7 201 121-354 30-244 (302)
9 2uvk_A YJHT; unknown function, 99.8 9.9E-18 3.4E-22 155.2 20.8 227 99-356 8-311 (357)
10 1zgk_A Kelch-like ECH-associat 99.8 3.9E-17 1.3E-21 148.2 23.0 200 120-354 38-255 (308)
11 2vpj_A Kelch-like protein 12; 99.8 1.2E-16 4.1E-21 144.3 24.7 199 121-354 31-246 (301)
12 2uvk_A YJHT; unknown function, 99.8 2.1E-16 7.3E-21 146.2 25.8 247 66-348 22-351 (357)
13 4asc_A Kelch repeat and BTB do 99.7 1.2E-16 3.9E-21 145.5 21.1 202 121-355 13-237 (315)
14 2woz_A Kelch repeat and BTB do 99.7 3.1E-16 1.1E-20 142.8 23.1 209 111-354 16-246 (318)
15 1k3i_A Galactose oxidase precu 99.6 1.7E-14 5.9E-19 144.2 21.3 250 78-358 168-516 (656)
16 2zwa_A Leucine carboxyl methyl 99.6 2.1E-13 7.3E-18 136.8 24.4 213 107-346 394-642 (695)
17 2zwa_A Leucine carboxyl methyl 99.5 1.7E-12 6E-17 130.2 20.5 201 76-297 412-646 (695)
18 1k3i_A Galactose oxidase precu 99.3 1.1E-10 3.7E-15 116.7 20.8 204 77-295 220-507 (656)
19 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 6.2E-11 2.1E-15 77.0 3.8 44 9-52 5-48 (53)
20 2e31_A FBS1, F-box only protei 98.9 3.7E-10 1.3E-14 99.5 2.0 52 8-59 46-98 (297)
21 3v7d_B Cell division control p 98.8 4.6E-06 1.6E-10 78.9 28.7 40 10-49 12-51 (464)
22 2ovr_B FBW7, F-BOX/WD repeat p 98.8 1E-06 3.4E-11 83.2 23.5 202 11-229 17-231 (445)
23 1p22_A F-BOX/WD-repeat protein 98.7 4.2E-07 1.4E-11 85.7 17.0 44 8-51 6-53 (435)
24 3l2o_B F-box only protein 4; s 97.8 5.3E-06 1.8E-10 72.4 2.1 45 11-55 3-47 (312)
25 2ast_B S-phase kinase-associat 97.6 2E-05 7E-10 71.4 2.5 44 9-52 5-48 (336)
26 2p1m_B Transport inhibitor res 97.3 9.8E-05 3.4E-09 72.3 2.6 39 8-46 1-40 (594)
27 3dsm_A Uncharacterized protein 96.5 0.44 1.5E-05 42.4 21.7 241 66-343 4-257 (328)
28 3u4y_A Uncharacterized protein 96.1 0.56 1.9E-05 41.2 18.5 190 111-342 10-210 (331)
29 3ogk_B Coronatine-insensitive 96.1 0.0018 6.3E-08 63.1 1.9 33 14-46 14-47 (592)
30 3hfq_A Uncharacterized protein 95.7 0.37 1.2E-05 42.8 15.6 207 108-346 94-326 (347)
31 3nol_A Glutamine cyclotransfer 95.7 0.81 2.8E-05 39.3 16.6 151 158-344 54-206 (262)
32 3mbr_X Glutamine cyclotransfer 95.5 1 3.4E-05 38.3 18.7 151 158-344 32-184 (243)
33 3dsm_A Uncharacterized protein 95.3 1.4 4.8E-05 39.0 22.0 180 120-344 16-217 (328)
34 1ri6_A Putative isomerase YBHE 95.1 0.98 3.3E-05 39.5 16.3 189 120-343 14-215 (343)
35 3no2_A Uncharacterized protein 95.0 1.5 5.2E-05 37.8 17.9 181 117-342 11-198 (276)
36 3jrp_A Fusion protein of prote 95.0 1.8 6E-05 38.4 18.8 187 120-340 32-241 (379)
37 1l0q_A Surface layer protein; 95.0 1.8 6.3E-05 38.8 18.1 191 107-343 39-237 (391)
38 3u4y_A Uncharacterized protein 95.0 1.7 5.8E-05 37.9 17.3 226 77-345 21-258 (331)
39 1l0q_A Surface layer protein; 94.8 2.1 7.2E-05 38.4 19.7 187 112-344 3-194 (391)
40 2z2n_A Virginiamycin B lyase; 94.5 2 6.9E-05 36.6 20.3 190 107-342 106-298 (299)
41 3jro_A Fusion protein of prote 94.0 2.6 8.8E-05 42.2 17.8 187 120-340 30-239 (753)
42 2qc5_A Streptogramin B lactona 93.9 2.7 9.1E-05 35.8 20.7 195 106-345 26-223 (300)
43 3mbr_X Glutamine cyclotransfer 93.8 2.5 8.7E-05 35.8 14.8 138 76-230 43-183 (243)
44 3hfq_A Uncharacterized protein 93.6 1.5 5.3E-05 38.6 14.1 152 170-345 19-178 (347)
45 3q7m_A Lipoprotein YFGL, BAMB; 93.3 4.3 0.00015 36.3 20.4 186 106-342 99-299 (376)
46 3nol_A Glutamine cyclotransfer 92.8 2 7E-05 36.8 12.6 137 77-230 66-205 (262)
47 1q7f_A NHL, brain tumor CG1071 92.6 4.3 0.00015 34.5 16.8 149 108-284 129-280 (286)
48 3nok_A Glutaminyl cyclase; bet 92.3 5 0.00017 34.5 16.4 148 158-344 66-215 (268)
49 3g4e_A Regucalcin; six bladed 91.7 5.9 0.0002 34.1 18.3 194 108-343 22-233 (297)
50 1ri6_A Putative isomerase YBHE 91.5 6.3 0.00022 34.1 18.4 205 108-346 46-271 (343)
51 3jrp_A Fusion protein of prote 91.4 6.4 0.00022 34.6 15.2 196 119-349 77-298 (379)
52 2iwa_A Glutamine cyclotransfer 91.2 6.7 0.00023 33.7 14.8 138 76-229 44-184 (266)
53 3no2_A Uncharacterized protein 91.1 3.4 0.00012 35.6 12.5 144 158-341 6-156 (276)
54 3scy_A Hypothetical bacterial 91.1 4.8 0.00016 35.6 14.0 194 123-346 31-249 (361)
55 3m0c_C LDL receptor, low-densi 90.8 15 0.00051 37.0 25.1 192 109-340 434-633 (791)
56 2qc5_A Streptogramin B lactona 90.8 6.9 0.00024 33.1 23.3 221 77-345 42-265 (300)
57 1qks_A Cytochrome CD1 nitrite 90.4 7.5 0.00026 37.5 15.3 201 110-344 166-378 (567)
58 2z2n_A Virginiamycin B lyase; 90.2 7.7 0.00026 32.8 21.5 195 106-345 21-218 (299)
59 2aq5_A Coronin-1A; WD40 repeat 90.1 10 0.00035 34.0 19.8 204 110-346 93-308 (402)
60 2iwa_A Glutamine cyclotransfer 89.9 8.7 0.0003 33.0 18.9 158 147-342 25-184 (266)
61 3nok_A Glutaminyl cyclase; bet 89.5 2.8 9.5E-05 36.1 10.2 136 78-230 77-214 (268)
62 1npe_A Nidogen, entactin; glyc 89.4 8.8 0.0003 32.3 24.0 197 107-346 44-246 (267)
63 3vgz_A Uncharacterized protein 88.9 11 0.00038 32.7 23.9 201 107-344 97-308 (353)
64 3dwl_C Actin-related protein 2 88.8 8.8 0.0003 33.9 13.8 141 119-283 31-176 (377)
65 3bws_A Protein LP49; two-domai 88.6 14 0.00046 33.4 21.8 197 109-344 132-339 (433)
66 3v9f_A Two-component system se 88.4 22 0.00074 35.5 17.9 193 107-340 457-657 (781)
67 1gxr_A ESG1, transducin-like e 88.3 11 0.00039 32.2 20.3 195 108-346 60-262 (337)
68 3ei3_B DNA damage-binding prot 88.3 13 0.00045 32.9 19.1 182 120-341 95-284 (383)
69 4aow_A Guanine nucleotide-bind 88.2 12 0.0004 32.3 18.6 141 169-341 195-339 (340)
70 3hrp_A Uncharacterized protein 88.2 15 0.00052 33.5 21.0 214 107-347 138-362 (409)
71 1rwi_B Serine/threonine-protei 88.1 10 0.00036 31.5 21.4 195 107-345 31-228 (270)
72 1k8k_C P40, ARP2/3 complex 41 88.1 13 0.00044 32.5 18.8 99 119-228 28-129 (372)
73 2hqs_A Protein TOLB; TOLB, PAL 87.7 16 0.00055 33.2 23.4 186 121-348 203-396 (415)
74 1n7d_A LDL receptor, low-densi 87.4 16 0.00055 36.2 15.6 197 107-344 414-619 (699)
75 3bws_A Protein LP49; two-domai 87.1 17 0.00057 32.8 18.7 106 112-230 225-338 (433)
76 4aez_A CDC20, WD repeat-contai 86.9 17 0.00057 32.6 21.3 135 120-284 112-248 (401)
77 4a11_B DNA excision repair pro 86.8 16 0.00055 32.3 14.8 25 319-343 256-280 (408)
78 3k26_A Polycomb protein EED; W 86.7 15 0.00052 31.9 15.3 66 110-180 127-194 (366)
79 1nir_A Nitrite reductase; hemo 86.7 22 0.00076 33.8 19.3 211 111-345 292-520 (543)
80 3q7m_A Lipoprotein YFGL, BAMB; 86.2 18 0.0006 32.1 20.4 192 109-342 52-261 (376)
81 3v9f_A Two-component system se 86.1 29 0.00099 34.6 22.4 199 109-346 416-618 (781)
82 3bg1_A Protein SEC13 homolog; 84.8 18 0.00063 31.2 17.1 114 108-230 22-141 (316)
83 2kwv_A RAD30 homolog B, DNA po 84.4 0.99 3.4E-05 26.8 3.0 27 5-31 13-39 (48)
84 1gxr_A ESG1, transducin-like e 84.3 19 0.00064 30.8 19.6 190 108-344 106-301 (337)
85 3v65_B Low-density lipoprotein 84.1 24 0.00081 31.8 22.2 191 108-341 125-320 (386)
86 2ovr_B FBW7, F-BOX/WD repeat p 84.0 25 0.00084 31.9 20.3 189 103-343 162-352 (445)
87 3v7d_B Cell division control p 83.5 26 0.00089 31.9 19.0 105 206-344 321-426 (464)
88 1p22_A F-BOX/WD-repeat protein 82.9 27 0.00093 31.6 16.1 93 169-287 153-245 (435)
89 3i2n_A WD repeat-containing pr 82.5 23 0.00079 30.5 18.1 98 119-227 137-244 (357)
90 2fp8_A Strictosidine synthase; 82.1 24 0.00083 30.5 18.9 197 110-341 91-315 (322)
91 1rwi_B Serine/threonine-protei 81.8 21 0.00071 29.6 20.3 188 108-341 75-266 (270)
92 1nir_A Nitrite reductase; hemo 81.7 36 0.0012 32.3 20.8 201 108-344 146-360 (543)
93 4gga_A P55CDC, cell division c 81.7 30 0.001 31.2 19.8 106 108-228 114-220 (420)
94 4e54_B DNA damage-binding prot 81.4 31 0.0011 31.3 15.1 106 112-228 134-242 (435)
95 1pjx_A Dfpase, DIISOPROPYLFLUO 81.4 24 0.00082 30.0 17.1 190 120-342 45-259 (314)
96 1erj_A Transcriptional repress 81.3 29 0.001 30.9 15.6 107 108-229 132-241 (393)
97 2pm9_A Protein WEB1, protein t 79.4 33 0.0011 30.4 13.9 112 111-229 178-297 (416)
98 2p4o_A Hypothetical protein; p 79.3 28 0.00096 29.9 12.3 110 202-340 36-148 (306)
99 1q7f_A NHL, brain tumor CG1071 79.1 27 0.00094 29.3 21.3 199 108-345 38-244 (286)
100 3e5z_A Putative gluconolactona 78.4 30 0.001 29.3 18.8 190 107-344 76-291 (296)
101 1ijq_A LDL receptor, low-densi 78.2 33 0.0011 29.7 23.1 194 107-341 38-240 (316)
102 2p4o_A Hypothetical protein; p 78.1 32 0.0011 29.5 20.9 198 109-344 41-246 (306)
103 1jmx_B Amine dehydrogenase; ox 78.0 23 0.0008 30.4 11.5 67 110-181 10-77 (349)
104 3fm0_A Protein CIAO1; WDR39,SG 77.8 35 0.0012 29.8 14.3 144 168-343 37-185 (345)
105 3jro_A Fusion protein of prote 77.7 18 0.00061 36.0 11.7 196 119-347 75-294 (753)
106 3fm0_A Protein CIAO1; WDR39,SG 77.7 35 0.0012 29.7 18.7 150 119-294 36-190 (345)
107 2ojh_A Uncharacterized protein 77.2 30 0.001 28.6 19.1 197 107-346 49-265 (297)
108 3mkq_A Coatomer beta'-subunit; 76.1 63 0.0022 31.8 19.6 179 120-342 34-220 (814)
109 2vdu_B TRNA (guanine-N(7)-)-me 75.8 47 0.0016 30.2 23.3 112 108-229 158-274 (450)
110 1got_B GT-beta; complex (GTP-b 75.5 40 0.0014 29.3 16.6 192 108-342 106-304 (340)
111 3i2n_A WD repeat-containing pr 75.3 39 0.0013 29.0 14.4 104 120-228 43-150 (357)
112 2pm7_B Protein transport prote 74.7 39 0.0013 28.7 21.3 190 119-340 29-239 (297)
113 3v64_C Agrin; beta propeller, 74.3 46 0.0016 29.4 24.8 193 107-341 81-277 (349)
114 3sfz_A APAF-1, apoptotic pepti 72.8 34 0.0011 36.0 12.8 179 119-343 981-1162(1249)
115 4gqb_B Methylosome protein 50; 72.5 50 0.0017 29.0 17.5 196 108-346 91-296 (344)
116 2dg1_A DRP35, lactonase; beta 72.1 47 0.0016 28.5 20.4 204 108-345 53-269 (333)
117 3sfz_A APAF-1, apoptotic pepti 72.0 1E+02 0.0034 32.3 19.3 147 107-284 623-774 (1249)
118 3sov_A LRP-6, low-density lipo 71.4 51 0.0018 28.7 22.6 191 109-342 45-241 (318)
119 3sjl_D Methylamine dehydrogena 71.1 39 0.0013 30.7 11.1 122 206-344 237-368 (386)
120 3vgz_A Uncharacterized protein 71.0 50 0.0017 28.3 21.5 189 120-344 68-267 (353)
121 1npe_A Nidogen, entactin; glyc 69.6 47 0.0016 27.6 16.9 112 106-228 86-200 (267)
122 2pm7_B Protein transport prote 69.3 51 0.0018 27.8 18.5 201 111-347 67-294 (297)
123 3e5z_A Putative gluconolactona 68.5 53 0.0018 27.7 17.9 186 119-346 48-253 (296)
124 3o4h_A Acylamino-acid-releasin 68.3 46 0.0016 31.5 11.8 104 112-230 124-231 (582)
125 1yfq_A Cell cycle arrest prote 68.3 56 0.0019 27.9 20.3 194 114-343 72-286 (342)
126 2dg1_A DRP35, lactonase; beta 67.8 58 0.002 27.9 15.0 148 158-339 57-213 (333)
127 4a0p_A LRP6, LRP-6, low-densit 67.4 94 0.0032 30.1 23.1 95 121-227 15-112 (628)
128 3lrv_A PRE-mRNA-splicing facto 67.2 62 0.0021 28.0 22.6 155 110-290 138-299 (343)
129 4a0p_A LRP6, LRP-6, low-densit 66.5 98 0.0033 30.0 23.9 190 107-340 45-238 (628)
130 2ad6_A Methanol dehydrogenase 66.4 93 0.0032 29.7 13.6 112 109-231 61-192 (571)
131 4ggc_A P55CDC, cell division c 65.6 60 0.002 27.2 13.2 140 119-284 170-315 (318)
132 3p5b_L Low density lipoprotein 65.5 78 0.0027 28.5 23.8 193 108-340 121-321 (400)
133 3tc9_A Hypothetical hydrolase; 65.3 40 0.0014 30.9 10.3 109 207-342 150-260 (430)
134 3tc9_A Hypothetical hydrolase; 65.2 83 0.0028 28.7 16.1 208 109-346 148-377 (430)
135 3fvz_A Peptidyl-glycine alpha- 64.2 70 0.0024 27.6 18.5 206 108-340 99-323 (329)
136 2fp8_A Strictosidine synthase; 64.1 68 0.0023 27.5 11.2 129 121-283 165-312 (322)
137 3s94_A LRP-6, low-density lipo 64.0 1.1E+02 0.0037 29.6 20.3 191 107-341 48-245 (619)
138 4g56_B MGC81050 protein; prote 63.9 75 0.0026 27.8 16.9 195 108-344 103-306 (357)
139 4g56_B MGC81050 protein; prote 63.4 77 0.0026 27.7 18.2 110 108-228 148-260 (357)
140 3scy_A Hypothetical bacterial 62.8 76 0.0026 27.5 22.8 119 206-346 221-346 (361)
141 1r5m_A SIR4-interacting protei 62.8 79 0.0027 27.7 19.6 194 108-344 117-324 (425)
142 1yiq_A Quinohemoprotein alcoho 62.2 90 0.0031 30.6 12.7 112 109-231 69-199 (689)
143 3iz6_a 40S ribosomal protein R 61.5 85 0.0029 27.6 20.0 189 119-340 178-376 (380)
144 4gqb_B Methylosome protein 50; 61.5 83 0.0028 27.5 17.2 110 108-228 136-248 (344)
145 3bg1_A Protein SEC13 homolog; 61.3 77 0.0026 27.0 12.2 35 258-297 272-306 (316)
146 2aq5_A Coronin-1A; WD40 repeat 61.2 87 0.003 27.6 18.4 191 118-341 54-256 (402)
147 1kv9_A Type II quinohemoprotei 61.0 81 0.0028 30.8 12.1 111 109-231 65-194 (668)
148 4a2l_A BT_4663, two-component 60.9 1.3E+02 0.0046 29.7 23.2 198 109-346 415-621 (795)
149 1got_B GT-beta; complex (GTP-b 60.5 83 0.0028 27.1 19.6 191 108-342 64-260 (340)
150 3iz6_a 40S ribosomal protein R 60.1 91 0.0031 27.4 13.9 206 108-343 117-333 (380)
151 3hrp_A Uncharacterized protein 59.8 87 0.003 28.3 11.4 111 206-345 141-255 (409)
152 2ad6_A Methanol dehydrogenase 59.4 76 0.0026 30.3 11.3 120 200-343 56-189 (571)
153 2pm9_A Protein WEB1, protein t 59.1 93 0.0032 27.3 16.4 188 119-341 134-339 (416)
154 4e54_B DNA damage-binding prot 58.8 1E+02 0.0035 27.7 14.2 103 159-283 134-239 (435)
155 3amr_A 3-phytase; beta-propell 58.8 1E+02 0.0034 27.6 11.7 135 76-225 50-209 (355)
156 3mmy_A MRNA export factor; mRN 58.4 87 0.003 26.7 17.4 102 111-228 54-162 (368)
157 3v65_B Low-density lipoprotein 57.8 1E+02 0.0036 27.5 21.6 188 110-341 87-279 (386)
158 4ery_A WD repeat-containing pr 57.5 86 0.0029 26.4 18.7 195 108-343 74-272 (312)
159 3vl1_A 26S proteasome regulato 56.9 1E+02 0.0035 27.1 12.7 107 206-343 108-216 (420)
160 3g4e_A Regucalcin; six bladed 56.6 62 0.0021 27.4 9.4 27 206-232 24-50 (297)
161 1kb0_A Quinohemoprotein alcoho 56.3 80 0.0027 30.9 11.1 121 200-344 71-206 (677)
162 3mmy_A MRNA export factor; mRN 55.1 99 0.0034 26.4 15.2 67 108-180 95-162 (368)
163 2ghs_A AGR_C_1268P; regucalcin 54.6 72 0.0024 27.6 9.6 26 207-232 61-86 (326)
164 4gga_A P55CDC, cell division c 54.2 1.2E+02 0.0041 27.0 12.9 139 120-284 251-395 (420)
165 4aez_A CDC20, WD repeat-contai 53.9 1.2E+02 0.004 26.8 21.1 193 108-345 143-342 (401)
166 4hw6_A Hypothetical protein, I 53.6 1.3E+02 0.0045 27.4 17.8 206 110-346 152-380 (433)
167 3c5m_A Oligogalacturonate lyas 53.5 1.1E+02 0.0038 26.5 12.7 99 121-231 216-334 (396)
168 1k8k_C P40, ARP2/3 complex 41 53.0 1.1E+02 0.0037 26.2 21.5 207 108-349 61-286 (372)
169 1kb0_A Quinohemoprotein alcoho 52.5 1.4E+02 0.0048 29.1 12.2 111 109-231 76-206 (677)
170 4hw6_A Hypothetical protein, I 52.2 1.1E+02 0.0039 27.8 10.9 115 201-342 142-262 (433)
171 2bkl_A Prolyl endopeptidase; m 52.0 1.7E+02 0.006 28.3 17.8 186 122-346 203-404 (695)
172 3azo_A Aminopeptidase; POP fam 51.9 1.7E+02 0.0057 28.0 19.2 192 121-345 161-375 (662)
173 3ow8_A WD repeat-containing pr 51.6 1.1E+02 0.0039 26.1 20.4 190 108-343 89-283 (321)
174 1kv9_A Type II quinohemoprotei 51.6 89 0.0031 30.5 10.6 122 200-344 60-194 (668)
175 3zwl_B Eukaryotic translation 50.4 1.2E+02 0.004 25.8 13.7 56 119-181 195-252 (369)
176 3f3f_A Nucleoporin SEH1; struc 50.0 1.1E+02 0.0039 25.5 16.2 33 259-296 317-349 (351)
177 3dwl_C Actin-related protein 2 49.6 1.3E+02 0.0044 26.0 15.0 212 108-350 64-292 (377)
178 1egx_A VAsp, vasodilator-stimu 48.5 21 0.00073 26.1 4.2 43 121-163 11-53 (115)
179 1ddw_A GLGF-domain protein hom 48.4 20 0.00068 26.5 4.0 40 121-163 11-51 (120)
180 1yiq_A Quinohemoprotein alcoho 47.9 1.4E+02 0.0049 29.1 11.4 116 200-344 64-199 (689)
181 3lrv_A PRE-mRNA-splicing facto 46.5 1.4E+02 0.0048 25.6 18.7 152 105-285 89-245 (343)
182 3azo_A Aminopeptidase; POP fam 46.0 2E+02 0.0069 27.3 17.9 209 110-347 90-333 (662)
183 3dr2_A Exported gluconolactona 44.2 89 0.003 26.5 8.4 111 208-346 58-185 (305)
184 1n7d_A LDL receptor, low-densi 43.5 1.2E+02 0.0043 29.7 10.2 74 147-229 544-617 (699)
185 4ery_A WD repeat-containing pr 43.4 1.5E+02 0.005 24.9 19.9 180 120-343 44-227 (312)
186 3ow8_A WD repeat-containing pr 42.3 1.6E+02 0.0055 25.1 17.7 187 116-343 53-241 (321)
187 1qks_A Cytochrome CD1 nitrite 41.8 2.4E+02 0.0081 26.8 12.7 110 206-344 166-280 (567)
188 4ggc_A P55CDC, cell division c 41.7 1.5E+02 0.0051 24.6 15.1 66 108-180 34-100 (318)
189 1flg_A Protein (quinoprotein e 40.9 95 0.0033 29.7 8.7 78 169-267 466-547 (582)
190 3mkq_A Coatomer beta'-subunit; 39.5 2.8E+02 0.0095 27.0 20.5 192 108-343 64-263 (814)
191 2vdu_B TRNA (guanine-N(7)-)-me 38.8 2.2E+02 0.0074 25.6 19.5 25 319-343 251-275 (450)
192 2ynn_A Coatomer subunit beta'; 38.6 1.7E+02 0.006 24.4 18.7 109 108-229 106-220 (304)
193 3fvz_A Peptidyl-glycine alpha- 38.1 1.9E+02 0.0065 24.7 18.4 152 110-284 154-322 (329)
194 3zwl_B Eukaryotic translation 37.7 1.9E+02 0.0064 24.5 19.2 56 119-181 52-108 (369)
195 2hz6_A Endoplasmic reticulum t 37.6 8.6 0.00029 34.5 0.6 29 202-231 5-35 (369)
196 1r5m_A SIR4-interacting protei 37.5 2E+02 0.007 24.9 16.5 25 206-230 160-184 (425)
197 1sq9_A Antiviral protein SKI8; 36.7 2.1E+02 0.0071 24.7 20.2 120 206-342 197-325 (397)
198 2ghs_A AGR_C_1268P; regucalcin 36.7 2E+02 0.0069 24.6 19.4 195 108-345 58-266 (326)
199 3m0c_C LDL receptor, low-densi 36.2 3.4E+02 0.012 27.1 22.2 115 201-345 474-595 (791)
200 3v64_C Agrin; beta propeller, 36.0 2.2E+02 0.0075 24.8 22.6 181 121-343 53-238 (349)
201 1w6s_A Methanol dehydrogenase 35.7 3E+02 0.01 26.3 13.1 115 110-231 62-198 (599)
202 2khu_A Immunoglobulin G-bindin 35.6 25 0.00087 24.6 2.6 22 5-26 65-86 (108)
203 3p5b_L Low density lipoprotein 35.5 2.4E+02 0.0083 25.2 22.8 182 121-345 92-283 (400)
204 3sre_A PON1, serum paraoxonase 35.5 2.4E+02 0.0081 25.0 16.9 150 119-290 81-258 (355)
205 1pby_B Quinohemoprotein amine 35.4 1E+02 0.0035 25.9 7.5 92 122-229 220-313 (337)
206 2hqs_A Protein TOLB; TOLB, PAL 35.4 2.4E+02 0.0082 25.1 19.5 113 107-232 230-350 (415)
207 1jmx_B Amine dehydrogenase; ox 35.2 2E+02 0.0069 24.2 11.9 25 206-230 10-34 (349)
208 3f3f_A Nucleoporin SEH1; struc 34.7 2E+02 0.0068 23.9 18.7 27 320-346 318-345 (351)
209 1ijq_A LDL receptor, low-densi 34.5 2.2E+02 0.0075 24.3 23.3 182 121-345 10-201 (316)
210 1w6s_A Methanol dehydrogenase 32.7 1.3E+02 0.0043 29.0 8.1 77 169-267 453-534 (599)
211 3vl1_A 26S proteasome regulato 32.6 2.5E+02 0.0086 24.5 22.0 108 108-229 106-215 (420)
212 3q6k_A 43.2 kDa salivary prote 32.5 2.4E+02 0.0081 25.4 9.3 83 258-346 96-198 (381)
213 1evh_A WH1 domain, protein (ME 32.3 1.1E+02 0.0037 22.1 5.8 42 121-163 11-52 (112)
214 1pgu_A Actin interacting prote 32.2 3.1E+02 0.01 25.4 19.2 111 209-344 175-288 (615)
215 1i2h_A PSD-ZIP45(homer-1C/VESL 31.6 44 0.0015 26.2 3.7 40 121-163 16-56 (168)
216 3sov_A LRP-6, low-density lipo 31.5 2.5E+02 0.0086 24.1 13.4 111 106-228 129-240 (318)
217 2xyi_A Probable histone-bindin 31.4 2.8E+02 0.0095 24.6 15.8 104 206-339 243-353 (430)
218 4a2l_A BT_4663, two-component 30.5 4E+02 0.014 26.2 22.8 234 78-347 237-488 (795)
219 3odt_A Protein DOA1; ubiquitin 29.7 2.3E+02 0.008 23.2 20.5 101 110-223 29-130 (313)
220 3s94_A LRP-6, low-density lipo 29.0 3.9E+02 0.013 25.6 23.7 194 107-344 357-556 (619)
221 2ojh_A Uncharacterized protein 28.7 2.3E+02 0.0078 22.8 20.8 185 119-347 20-214 (297)
222 1pby_B Quinohemoprotein amine 28.2 2.6E+02 0.0088 23.2 12.8 58 120-181 10-68 (337)
223 1vyh_C Platelet-activating fac 28.1 3.1E+02 0.011 24.2 20.6 144 110-283 119-264 (410)
224 3sre_A PON1, serum paraoxonase 27.8 3.2E+02 0.011 24.2 11.3 33 261-296 128-161 (355)
225 3sjl_D Methylamine dehydrogena 27.6 3.4E+02 0.011 24.4 9.6 102 120-230 246-367 (386)
226 3k26_A Polycomb protein EED; W 27.5 2.8E+02 0.0094 23.4 21.4 139 121-283 44-191 (366)
227 1erj_A Transcriptional repress 27.1 3.2E+02 0.011 23.9 13.6 105 206-342 134-241 (393)
228 3amr_A 3-phytase; beta-propell 26.1 3.5E+02 0.012 24.0 17.9 192 120-342 49-267 (355)
229 1nr0_A Actin interacting prote 26.0 4.2E+02 0.014 24.9 15.2 112 108-229 199-316 (611)
230 2pbi_B Guanine nucleotide-bind 25.4 3.2E+02 0.011 23.4 20.8 137 168-341 175-317 (354)
231 1sq9_A Antiviral protein SKI8; 24.8 3.3E+02 0.011 23.3 17.8 117 107-229 194-325 (397)
232 1pgu_A Actin interacting prote 24.7 4.1E+02 0.014 24.4 17.2 94 120-227 466-573 (615)
233 3gre_A Serine/threonine-protei 24.5 3.6E+02 0.012 23.7 18.0 108 206-342 181-295 (437)
234 4h5i_A Guanine nucleotide-exch 24.1 3.5E+02 0.012 23.4 16.6 152 120-294 196-358 (365)
235 2pbi_B Guanine nucleotide-bind 23.4 3.5E+02 0.012 23.2 20.2 139 119-283 174-314 (354)
236 2dk7_A Transcription elongatio 20.8 61 0.0021 21.4 2.3 20 120-139 29-50 (73)
237 4a11_B DNA excision repair pro 20.3 4E+02 0.014 22.7 15.5 55 215-285 312-366 (408)
238 3gre_A Serine/threonine-protei 20.2 4.4E+02 0.015 23.1 17.9 57 168-230 191-249 (437)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.90 E-value=1.1e-21 Score=177.93 Aligned_cols=256 Identities=16% Similarity=0.098 Sum_probs=184.3
Q ss_pred ceEEEEeCCCCCCccccccCCCCCeeeecCCCCCCCCCceEEEEecCcEEEEecCC----CceEEEEeccccceeccCCC
Q 017381 64 SCFILLSHPQCYDQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS----SSSFLVCNLVTLSSRTIDFP 139 (372)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~d~~~~~w~~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~----~~~~~v~NP~t~~~~~lP~~ 139 (372)
..++++.+......+..||+..++|..++. +|..+..+.++..+|.|++.++. .+.+.+|||.+++|..++++
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRC---PFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCC---CSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCC---CCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 346666554445567889999999998852 23344445555667766665542 35899999999999999998
Q ss_pred CCCCCceeEEEEeCCCCEEEEEEeecC----CCceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeC
Q 017381 140 TYPFDFELLTLVSTPSGYKIFMLFAKS----FPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE 215 (372)
Q Consensus 140 ~~~~~~~~~~~~~~~~~ykvv~~~~~~----~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~ 215 (372)
+.++..+..+... -+|+++||.. ....+++||+.+++|+... .+|. .+..+..+.++|++|.+++.
T Consensus 89 p~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~ 158 (306)
T 3ii7_A 89 PTPRDSLAACAAE----GKIYTSGGSEVGNSALYLFECYDTRTESWHTKP--SMLT----QRCSHGMVEANGLIYVCGGS 158 (306)
T ss_dssp SSCCBSCEEEEET----TEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC--CCSS----CCBSCEEEEETTEEEEECCE
T ss_pred CccccceeEEEEC----CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC--CCcC----CcceeEEEEECCEEEEECCC
Confidence 8776655544432 2799998854 2358999999999999998 6665 23456678899999999752
Q ss_pred ---------CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCC
Q 017381 216 ---------PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG 286 (372)
Q Consensus 216 ---------~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~ 286 (372)
...+..||+.+++|+.+. + +|..+..+.++. .+++||++++.... ...-++|.+|..+
T Consensus 159 ~~~~~~~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~i~v~GG~~~~--~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 159 LGNNVSGRVLNSCEVYDPATETWTELC-P-------MIEARKNHGLVF---VKDKIFAVGGQNGL--GGLDNVEYYDIKL 225 (306)
T ss_dssp ESCTTTCEECCCEEEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCEETT--EEBCCEEEEETTT
T ss_pred CCCCCcccccceEEEeCCCCCeEEECC-C-------ccchhhcceEEE---ECCEEEEEeCCCCC--CCCceEEEeeCCC
Confidence 345899999999999874 5 676666666664 89999999986432 1223566667666
Q ss_pred C-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCceEECCCCCCCCCCCcc
Q 017381 287 N-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTWHWLPSCPSLPHKWSC 357 (372)
Q Consensus 287 ~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w~~v~~~~~~~~~~~~ 357 (372)
+ |+++..+|.. .....++..++.||+.++. ...+.+||+++++|+.++.+|.++.-+++
T Consensus 226 ~~W~~~~~~p~~------------r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~ 290 (306)
T 3ii7_A 226 NEWKMVSPMPWK------------GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCL 290 (306)
T ss_dssp TEEEECCCCSCC------------BSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCE
T ss_pred CcEEECCCCCCC------------ccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEE
Confidence 5 9999877632 1223455568889998752 35699999999999999988877654433
No 2
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.89 E-value=1e-20 Score=171.79 Aligned_cols=253 Identities=17% Similarity=0.117 Sum_probs=179.3
Q ss_pred eEEEEeCC--CCCCccccccCCCCCeeeecCCCCCCCCCceEEEEecCcEEEEecCC---------CceEEEEeccccce
Q 017381 65 CFILLSHP--QCYDQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS---------SSSFLVCNLVTLSS 133 (372)
Q Consensus 65 ~~~~~~~~--~~~~~~~~~d~~~~~w~~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~---------~~~~~v~NP~t~~~ 133 (372)
.++++.+. .....+..||+..++|..++ .+|..+..+.++..+|.|++.++. .+.+++|||.+++|
T Consensus 26 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 26 LIYTAGGYFRQSLSYLEAYNPSNGTWLRLA---DLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CEEEECCBSSSBCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred EEEEEeCcCCCCcceEEEEcCCCCeEeECC---CCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 35555432 22345678999999999885 223334444455667766665542 24789999999999
Q ss_pred eccCCCCCCCCceeEEEEeCCCCEEEEEEeecCC---CceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEE
Q 017381 134 RTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF---PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLY 210 (372)
Q Consensus 134 ~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~---~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y 210 (372)
..+++++.++.....+.... +|+++|+... ...+++||+.+++|+... .+|. .+..+..+.++|++|
T Consensus 103 ~~~~~~p~~r~~~~~~~~~~----~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iy 172 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVIDG----HIYAVGGSHGCIHHNSVERYEPERDEWHLVA--PMLT----RRIGVGVAVLNRLLY 172 (308)
T ss_dssp EECCCCSSCCBTCEEEEETT----EEEEECCEETTEECCCEEEEETTTTEEEECC--CCSS----CCBSCEEEEETTEEE
T ss_pred eECCCCCcCccccEEEEECC----EEEEEcCCCCCcccccEEEECCCCCeEeECC--CCCc----cccceEEEEECCEEE
Confidence 99999887766555444322 7999987543 358999999999999998 6664 234566788899999
Q ss_pred EeeeC-----CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCC
Q 017381 211 FTTPE-----PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (372)
Q Consensus 211 ~~~~~-----~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (372)
.+++. ...+..||+.+++|+.+. + +|..+..+.++. .+++||++++..... ..-++|.+|..
T Consensus 173 v~GG~~~~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~~--~~~~v~~yd~~ 239 (308)
T 1zgk_A 173 AVGGFDGTNRLNSAECYYPERNEWRMIT-A-------MNTIRSGAGVCV---LHNCIYAAGGYDGQD--QLNSVERYDVE 239 (308)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEECC-C-------CSSCCBSCEEEE---ETTEEEEECCBCSSS--BCCCEEEEETT
T ss_pred EEeCCCCCCcCceEEEEeCCCCeEeeCC-C-------CCCccccceEEE---ECCEEEEEeCCCCCC--ccceEEEEeCC
Confidence 99863 245999999999999874 4 666655556664 899999999854322 23456666766
Q ss_pred CC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCceEECCCCCCCCCCC
Q 017381 286 GN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTWHWLPSCPSLPHKW 355 (372)
Q Consensus 286 ~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w~~v~~~~~~~~~~ 355 (372)
++ |+++..+|... ....++..++.||+.++. ...+.+||+++++|++++.+|.++.-+
T Consensus 240 ~~~W~~~~~~p~~r------------~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 303 (308)
T 1zgk_A 240 TETWTFVAPMKHRR------------SALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGV 303 (308)
T ss_dssp TTEEEECCCCSSCC------------BSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSC
T ss_pred CCcEEECCCCCCCc------------cceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCcccc
Confidence 65 99988776321 123344568889998752 346899999999999999988776543
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.88 E-value=4.7e-20 Score=166.88 Aligned_cols=241 Identities=12% Similarity=0.076 Sum_probs=172.3
Q ss_pred CccccccCCCCCeeeecCCCCCCCCCceEEEEecCcEEEEecCC-----CceEEEEeccccceeccCCCCCCCCceeEEE
Q 017381 76 DQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS-----SSSFLVCNLVTLSSRTIDFPTYPFDFELLTL 150 (372)
Q Consensus 76 ~~~~~~d~~~~~w~~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~-----~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~ 150 (372)
..+..||+..++|..++ .+|..+..+.++..+|.|++.++. .+.+++|||.+++|..+++++.++..+..+.
T Consensus 30 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 106 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVA---ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV 106 (302)
T ss_dssp CCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE
T ss_pred CcEEEEcCcCCcEeEcc---cCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE
Confidence 35677999999999885 223334444455667766665542 2478999999999999999887766555444
Q ss_pred EeCCCCEEEEEEeecCCC---ceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeC-------CcEEE
Q 017381 151 VSTPSGYKIFMLFAKSFP---NYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-------PFSIV 220 (372)
Q Consensus 151 ~~~~~~ykvv~~~~~~~~---~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~-------~~~i~ 220 (372)
... +|+++||.... ..+++||+.+++|+.+. .+|. .+..+..+.++|++|.+++. ...+.
T Consensus 107 ~~~----~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~ 176 (302)
T 2xn4_A 107 LNG----LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA--PMNT----RRSSVGVGVVGGLLYAVGGYDVASRQCLSTVE 176 (302)
T ss_dssp ETT----EEEEEEEECSSCEEEEEEEEETTTTEEEEEC--CCSS----CCBSCEEEEETTEEEEECCEETTTTEECCCEE
T ss_pred ECC----EEEEEcCCCCCccCceEEEEeCCCCeEeecC--CCCC----cccCceEEEECCEEEEEeCCCCCCCccccEEE
Confidence 322 78888885432 48999999999999998 6664 23456678899999999752 24589
Q ss_pred EEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHH
Q 017381 221 RFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMC 299 (372)
Q Consensus 221 ~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~ 299 (372)
.||+.+++|+.+. + +|..+..+.++. .+++||++++.... ...-++|.+|..+. |+++..+|...
T Consensus 177 ~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~~~~~r- 242 (302)
T 2xn4_A 177 CYNATTNEWTYIA-E-------MSTRRSGAGVGV---LNNLLYAVGGHDGP--LVRKSVEVYDPTTNAWRQVADMNMCR- 242 (302)
T ss_dssp EEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCBSSS--SBCCCEEEEETTTTEEEEECCCSSCC-
T ss_pred EEeCCCCcEEECC-C-------CccccccccEEE---ECCEEEEECCCCCC--cccceEEEEeCCCCCEeeCCCCCCcc-
Confidence 9999999999874 4 666665566664 89999999985422 12235666676665 99998776321
Q ss_pred HHhhhhccCCCceEEEEeeCCEEEEEeecC-----CeEEEEECCCCceEECC-CCCCCCCC
Q 017381 300 RKFMSVCYHNYDHVYCFWHQGMICVCCYTW-----PEILYYNVARRTWHWLP-SCPSLPHK 354 (372)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~v~~yd~~~~~w~~v~-~~~~~~~~ 354 (372)
....++..++.||+.++.. ..+.+||+++++|+.++ .+|.++..
T Consensus 243 -----------~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~ 292 (302)
T 2xn4_A 243 -----------RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSY 292 (302)
T ss_dssp -----------BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBS
T ss_pred -----------ccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCccccc
Confidence 1233455688899987532 35999999999999997 67766543
No 4
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.87 E-value=5.3e-20 Score=167.60 Aligned_cols=237 Identities=14% Similarity=0.145 Sum_probs=169.8
Q ss_pred CccccccCCCCCeeeecCCCCCCCCCceEEEEecCcEEEEecCC-----------CceEEEEeccccceeccCCCCCCCC
Q 017381 76 DQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS-----------SSSFLVCNLVTLSSRTIDFPTYPFD 144 (372)
Q Consensus 76 ~~~~~~d~~~~~w~~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~-----------~~~~~v~NP~t~~~~~lP~~~~~~~ 144 (372)
..+..||+..++|...++|. |.++..+.++..+|.|++.++. .+.+++|||.+++|..+|+++.++.
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSS--QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEEEECCC--CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEE
T ss_pred CceEEECCCCCeEecCCCCC--CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchh
Confidence 35678999999998755543 2345555566677755444331 1248999999999999999887665
Q ss_pred ceeEEEEeCCCCEEEEEEeecC------CCceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeC---
Q 017381 145 FELLTLVSTPSGYKIFMLFAKS------FPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE--- 215 (372)
Q Consensus 145 ~~~~~~~~~~~~ykvv~~~~~~------~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~--- 215 (372)
.+..+.... +|+++||.. ....+++||+.+++|+.++ .+|. .+..+.++.++|++|.+++.
T Consensus 91 ~~~~~~~~~----~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 91 LFGLGEALN----SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD--PLPY----VVYGHTVLSHMDLVYVIGGKGSD 160 (315)
T ss_dssp SCEEEEETT----EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC--CCSS----CCBSCEEEEETTEEEEECCBCTT
T ss_pred ceeEEEECC----EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC--CCCC----cccceeEEEECCEEEEEeCCCCC
Confidence 554444322 899998842 2358999999999999998 6665 23456788899999999864
Q ss_pred ---CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCC-EEEE
Q 017381 216 ---PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEV 291 (372)
Q Consensus 216 ---~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v 291 (372)
...+..||+.+++|+.+. + +|..+..+..++ .+|+||++++..... ..-++|.+|..++ |+++
T Consensus 161 ~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~~--~~~~~~~yd~~~~~W~~~ 227 (315)
T 4asc_A 161 RKCLNKMCVYDPKKFEWKELA-P-------MQTARSLFGATV---HDGRIIVAAGVTDTG--LTSSAEVYSITDNKWAPF 227 (315)
T ss_dssp SCBCCCEEEEETTTTEEEECC-C-------CSSCCBSCEEEE---ETTEEEEEEEECSSS--EEEEEEEEETTTTEEEEE
T ss_pred CcccceEEEEeCCCCeEEECC-C-------CCCchhceEEEE---ECCEEEEEeccCCCC--ccceEEEEECCCCeEEEC
Confidence 246999999999999874 5 676666666664 899999999964322 2346777777665 9999
Q ss_pred EecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecC--------------CeEEEEECCCCceEECCCCC
Q 017381 292 ERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW--------------PEILYYNVARRTWHWLPSCP 349 (372)
Q Consensus 292 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------------~~v~~yd~~~~~w~~v~~~~ 349 (372)
..+|... ....++..++.||+.++.. ..+.+||+++++|+.++..|
T Consensus 228 ~~~p~~r------------~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~ 287 (315)
T 4asc_A 228 EAFPQER------------SSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREI 287 (315)
T ss_dssp CCCSSCC------------BSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESCS
T ss_pred CCCCCcc------------cceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccCC
Confidence 8776331 2234455678888887531 34899999999999994433
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.87 E-value=2.3e-20 Score=168.83 Aligned_cols=241 Identities=14% Similarity=0.105 Sum_probs=173.5
Q ss_pred CccccccCCCCCeeeecCCCCCCCCCceEEEEecCcEEEEecCC-----CceEEEEeccccc---eeccCCCCCCCCcee
Q 017381 76 DQYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS-----SSSFLVCNLVTLS---SRTIDFPTYPFDFEL 147 (372)
Q Consensus 76 ~~~~~~d~~~~~w~~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~-----~~~~~v~NP~t~~---~~~lP~~~~~~~~~~ 147 (372)
..+..||+..++|..++ .+|..+..+..+..+|.|++.++. .+.+++|||.+++ |..+++++.++..+.
T Consensus 31 ~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~ 107 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLP---SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG 107 (301)
T ss_dssp CCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCE
T ss_pred eEEEEEcCCCCeEEeCC---CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCcccee
Confidence 45678999999999886 223334444455667766665542 2479999999999 999999887766555
Q ss_pred EEEEeCCCCEEEEEEeecCC---CceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeC-----CcEE
Q 017381 148 LTLVSTPSGYKIFMLFAKSF---PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSI 219 (372)
Q Consensus 148 ~~~~~~~~~ykvv~~~~~~~---~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~-----~~~i 219 (372)
.+... -+|+++|+... ...+++||+.+++|+.+. .+|. .+..+..+.++|++|.+++. ...+
T Consensus 108 ~~~~~----~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 177 (301)
T 2vpj_A 108 ATTLG----DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG--DMQT----AREGAGLVVASGVIYCLGGYDGLNILNSV 177 (301)
T ss_dssp EEEET----TEEEEECCBCSSCBCCEEEEEETTTTEEEEEE--ECSS----CCBSCEEEEETTEEEEECCBCSSCBCCCE
T ss_pred EEEEC----CEEEEEcccCCCcccceEEEEcCCCCeEEECC--CCCC----CcccceEEEECCEEEEECCCCCCcccceE
Confidence 54442 27999987543 348999999999999988 5654 23456678889999999763 2458
Q ss_pred EEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHH
Q 017381 220 VRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMM 298 (372)
Q Consensus 220 ~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~ 298 (372)
.+||+.+++|+.+. + +|..+..+.++. .+++|+++++...... .-++|.+|..+. |+++..+|...
T Consensus 178 ~~~d~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~i~v~GG~~~~~~--~~~v~~yd~~~~~W~~~~~~p~~r 244 (301)
T 2vpj_A 178 EKYDPHTGHWTNVT-P-------MATKRSGAGVAL---LNDHIYVVGGFDGTAH--LSSVEAYNIRTDSWTTVTSMTTPR 244 (301)
T ss_dssp EEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCBCSSSB--CCCEEEEETTTTEEEEECCCSSCC
T ss_pred EEEeCCCCcEEeCC-C-------CCcccccceEEE---ECCEEEEEeCCCCCcc--cceEEEEeCCCCcEEECCCCCCcc
Confidence 99999999999874 4 666665566664 8999999998543221 235666666655 99998776321
Q ss_pred HHHhhhhccCCCceEEEEeeCCEEEEEeecC-----CeEEEEECCCCceEECCCCCCCCCC
Q 017381 299 CRKFMSVCYHNYDHVYCFWHQGMICVCCYTW-----PEILYYNVARRTWHWLPSCPSLPHK 354 (372)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~v~~yd~~~~~w~~v~~~~~~~~~ 354 (372)
....++..++.||+.++.. ..+.+||+++++|+.++.+|.++..
T Consensus 245 ------------~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~ 293 (301)
T 2vpj_A 245 ------------CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCD 293 (301)
T ss_dssp ------------BSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEES
T ss_pred ------------cceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCccccc
Confidence 1233455688899987532 4589999999999999988876543
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.87 E-value=1.5e-19 Score=164.82 Aligned_cols=231 Identities=14% Similarity=0.215 Sum_probs=165.8
Q ss_pred cccccCCCCCeeeecCCCCCCCCCceEEEEecCcEEEEecCC-----------CceEEEEeccccceeccCCCCCCCCce
Q 017381 78 YPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPS-----------SSSFLVCNLVTLSSRTIDFPTYPFDFE 146 (372)
Q Consensus 78 ~~~~d~~~~~w~~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~-----------~~~~~v~NP~t~~~~~lP~~~~~~~~~ 146 (372)
...||+..++|...+++. +.++..+.++..+|.|++.++. ...+++|||.+++|..+|+++.++..+
T Consensus 26 ~~~yd~~~~~W~~~~~~~--~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 103 (318)
T 2woz_A 26 AVAYDPMENECYLTALAE--QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF 103 (318)
T ss_dssp EEEEETTTTEEEEEEECT--TSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC
T ss_pred eEEECCCCCceecccCCc--cCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc
Confidence 578999999998865442 2334555566777755554431 113889999999999999988776655
Q ss_pred eEEEEeCCCCEEEEEEeecCC-----CceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeC------
Q 017381 147 LLTLVSTPSGYKIFMLFAKSF-----PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE------ 215 (372)
Q Consensus 147 ~~~~~~~~~~ykvv~~~~~~~-----~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~------ 215 (372)
..+.... +|+++||... ...+++||+.+++|+.++ .+|. .+..+..++++|++|++++.
T Consensus 104 ~~~~~~~----~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 104 GLGEVDD----KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK--NLPI----KVYGHNVISHNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp EEEEETT----EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC--CCSS----CEESCEEEEETTEEEEECCEESSSCB
T ss_pred ceEEECC----EEEEEcCccCCCCcccceEEEEeCCCCCEeECC--CCCC----cccccEEEEECCEEEEEcCCCCCCCc
Confidence 5444322 7899888641 248999999999999998 6665 22456678899999999862
Q ss_pred CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEec
Q 017381 216 PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERV 294 (372)
Q Consensus 216 ~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~l 294 (372)
...+..||+.+++|+.+. + +|..+..+.+++ .+|+||++++.... ...-++|.+|..++ |+++..+
T Consensus 174 ~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~--~~~~~~~~yd~~~~~W~~~~~~ 240 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLA-P-------MKTPRSMFGVAI---HKGKIVIAGGVTED--GLSASVEAFDLKTNKWEVMTEF 240 (318)
T ss_dssp CCCEEEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEEEEEETT--EEEEEEEEEETTTCCEEECCCC
T ss_pred cceEEEEcCCCCEEEECC-C-------CCCCcccceEEE---ECCEEEEEcCcCCC--CccceEEEEECCCCeEEECCCC
Confidence 245999999999999874 4 666665556664 89999999986532 22346777776655 9999877
Q ss_pred ChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec--------------CCeEEEEECCCCceEEC
Q 017381 295 PEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT--------------WPEILYYNVARRTWHWL 345 (372)
Q Consensus 295 p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------------~~~v~~yd~~~~~w~~v 345 (372)
|... ....++..++.||+.++. ...+.+||+++++|+++
T Consensus 241 p~~r------------~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 241 PQER------------SSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp SSCC------------BSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred CCcc------------cceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 6421 123445567888888642 24589999999999998
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.79 E-value=3.5e-17 Score=148.17 Aligned_cols=203 Identities=14% Similarity=0.167 Sum_probs=149.4
Q ss_pred CceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecC--CCceEEEEECCCCCccccccCCCCccccccC
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS--FPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~--~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (372)
.+.+.+|||.+++|..+++++.++..+..+.... +|+++||.. ....+++||+.+++|+.+. .+|. .+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~----~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r 92 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDN----VVYILGGSQLFPIKRMDCYNVVKDSWYSKL--GPPT----PR 92 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETT----EEEEECCBSSSBCCEEEEEETTTTEEEEEE--CCSS----CC
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEECC----EEEEEeCCCCCCcceEEEEeCCCCeEEECC--CCCc----cc
Confidence 4689999999999999999887766555444322 789998864 2358999999999999998 6664 23
Q ss_pred CCcccEEECCEEEEeeeCC------cEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecC
Q 017381 198 SHQEGVFYKGSLYFTTPEP------FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRN 271 (372)
Q Consensus 198 ~~~~~v~~~G~~y~~~~~~------~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~ 271 (372)
..+..+.++|++|++++.. ..+..||+.+++|+.+. + +|..+..+.++. .+|+||++++....
T Consensus 93 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~ 161 (306)
T 3ii7_A 93 DSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKP-S-------MLTQRCSHGMVE---ANGLIYVCGGSLGN 161 (306)
T ss_dssp BSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCEESC
T ss_pred cceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCC-C-------CcCCcceeEEEE---ECCEEEEECCCCCC
Confidence 4567788999999998632 45899999999999873 4 666666666664 89999999986532
Q ss_pred Cc--cceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCceE
Q 017381 272 GI--STTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTWH 343 (372)
Q Consensus 272 ~~--~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w~ 343 (372)
.. ...-++|.+|..+. |+++..+|.. .....++..++.||+.++. ...+.+||+++++|+
T Consensus 162 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~------------r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 162 NVSGRVLNSCEVYDPATETWTELCPMIEA------------RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp TTTCEECCCEEEEETTTTEEEEECCCSSC------------CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEE
T ss_pred CCcccccceEEEeCCCCCeEEECCCccch------------hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEE
Confidence 21 01335666676665 9999877632 1223344558889998753 246899999999999
Q ss_pred ECCCCCCCCCCC
Q 017381 344 WLPSCPSLPHKW 355 (372)
Q Consensus 344 ~v~~~~~~~~~~ 355 (372)
.++.+|.++..+
T Consensus 230 ~~~~~p~~r~~~ 241 (306)
T 3ii7_A 230 MVSPMPWKGVTV 241 (306)
T ss_dssp ECCCCSCCBSCC
T ss_pred ECCCCCCCccce
Confidence 999888766543
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.79 E-value=3.3e-17 Score=148.11 Aligned_cols=201 Identities=9% Similarity=0.078 Sum_probs=147.6
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCC---CceEEEEECCCCCccccccCCCCccccccC
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF---PNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~---~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (372)
+.+.+|||.+++|..+++++.++..+..+... -+|+++||... ...+++||+.+++|+.+. .+|. .+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~----~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~p~----~r 99 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMA----GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA--NMRD----RR 99 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEET----TEEEEESCBCSSSBCCCEEEEETTTTEEEEEC--CCSS----CC
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEEC----CEEEEEeCcCCCccccceEEECCCCCceeeCC--CCCc----cc
Confidence 57899999999999999888766554444332 27999988543 358999999999999998 6665 23
Q ss_pred CCcccEEECCEEEEeeeCC-----cEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCC
Q 017381 198 SHQEGVFYKGSLYFTTPEP-----FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNG 272 (372)
Q Consensus 198 ~~~~~v~~~G~~y~~~~~~-----~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~ 272 (372)
..+..+.++|++|.+++.. ..+..||+.+++|+.+. + +|..+..+..++ .+|+||++++.....
T Consensus 100 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 100 STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA-P-------MNTRRSSVGVGV---VGGLLYAVGGYDVAS 168 (302)
T ss_dssp BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEEC-C-------CSSCCBSCEEEE---ETTEEEEECCEETTT
T ss_pred cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecC-C-------CCCcccCceEEE---ECCEEEEEeCCCCCC
Confidence 4567788999999998632 35899999999999874 4 666665556663 899999999864322
Q ss_pred ccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCceEECC
Q 017381 273 ISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTWHWLP 346 (372)
Q Consensus 273 ~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w~~v~ 346 (372)
....-++|.+|..++ |+++..+|... ....++..++.||+.++. ...+.+||+++++|+.++
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r------------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRR------------SGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCC------------BSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEEC
T ss_pred CccccEEEEEeCCCCcEEECCCCcccc------------ccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCC
Confidence 111235666676665 99998776321 223445568889998753 246999999999999999
Q ss_pred CCCCCCCC
Q 017381 347 SCPSLPHK 354 (372)
Q Consensus 347 ~~~~~~~~ 354 (372)
.+|.++..
T Consensus 237 ~~~~~r~~ 244 (302)
T 2xn4_A 237 DMNMCRRN 244 (302)
T ss_dssp CCSSCCBS
T ss_pred CCCCcccc
Confidence 88876643
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.79 E-value=9.9e-18 Score=155.20 Aligned_cols=227 Identities=13% Similarity=0.115 Sum_probs=150.9
Q ss_pred CCCceEEEEecCcEEEEecC-CCceEEEEeccc--cceeccCCCC-CCCCceeEEEEeCCCCEEEEEEeec-C-------
Q 017381 99 LPSAATLLSSSKGLLCFSLP-SSSSFLVCNLVT--LSSRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAK-S------- 166 (372)
Q Consensus 99 ~~~~~~~~~s~~Gll~~~~~-~~~~~~v~NP~t--~~~~~lP~~~-~~~~~~~~~~~~~~~~ykvv~~~~~-~------- 166 (372)
..+.....+..+|.|++.++ ..+.+++|||.+ ++|..+++++ .++..+..+.... +|+++||. .
T Consensus 8 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~----~lyv~GG~~~~~~~~~~ 83 (357)
T 2uvk_A 8 VPFKSGTGAIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDG----NLYVFGGIGKNSEGLTQ 83 (357)
T ss_dssp SCCCSCEEEEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETT----EEEEECCEEECTTSCEE
T ss_pred ccccceEEEEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECC----EEEEEcCCCCCCCccce
Confidence 33444445555786666554 346899999984 9999999988 5665555444322 79999886 2
Q ss_pred CCceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeCC------------------------------
Q 017381 167 FPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEP------------------------------ 216 (372)
Q Consensus 167 ~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~------------------------------ 216 (372)
....+++||+.+++|+.+. .+++ . .+..+.++.++|++|++++..
T Consensus 84 ~~~~v~~yd~~~~~W~~~~--~~~p--~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 84 VFNDVHKYNPKTNSWVKLM--SHAP--M-GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp ECCCEEEEETTTTEEEECS--CCCS--S-CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred eeccEEEEeCCCCcEEECC--CCCC--c-ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 1348999999999999998 5552 1 234556677999999998631
Q ss_pred ---------cEEEEEecCCCeeeccCCCCccccccCCCcccc-cceeeeccCCCeEEEEEeeecCCccceEEEEEEc--C
Q 017381 217 ---------FSIVRFDLENGIWETPNDANDHMTMMLPHELTF-FRLVNDGEESNKLYLIGGVGRNGISTTMKLWELG--C 284 (372)
Q Consensus 217 ---------~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~-~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~--~ 284 (372)
..+.+||+.+++|+.+. + +|..... +.++. .+++||++++..... ....++|.++ .
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~-~-------~p~~~~~~~~~~~---~~~~iyv~GG~~~~~-~~~~~v~~~d~d~ 226 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAG-E-------SPWYGTAGAAVVN---KGDKTWLINGEAKPG-LRTDAVFELDFTG 226 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEE-E-------CSSCCCBSCEEEE---ETTEEEEECCEEETT-EECCCEEEEECC-
T ss_pred ccccccCCcccEEEEeCCCCcEEECC-C-------CCCCCcccccEEE---ECCEEEEEeeecCCC-cccCceEEEEecC
Confidence 47999999999999873 4 5644333 55553 899999999864322 2233455554 3
Q ss_pred CCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecC----------------------CeEEEEECCCCc
Q 017381 285 GGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW----------------------PEILYYNVARRT 341 (372)
Q Consensus 285 ~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------------------~~v~~yd~~~~~ 341 (372)
.+. |+++..+|... ......++..++.||+.++.. ..+.+||+++++
T Consensus 227 ~~~~W~~~~~~~~~~----------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 227 NNLKWNKLAPVSSPD----------GVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp --CEEEECCCSSTTT----------CCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred CCCcEEecCCCCCCc----------ccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 544 99988775321 011233556788899987521 257899999999
Q ss_pred eEECCCCCCCCCCCc
Q 017381 342 WHWLPSCPSLPHKWS 356 (372)
Q Consensus 342 w~~v~~~~~~~~~~~ 356 (372)
|+.++.+|.++..+.
T Consensus 297 W~~~~~~p~~r~~~~ 311 (357)
T 2uvk_A 297 WDKSGELSQGRAYGV 311 (357)
T ss_dssp CEEEEECSSCCBSSE
T ss_pred eeeCCCCCCCcccce
Confidence 999998887765433
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.78 E-value=3.9e-17 Score=148.16 Aligned_cols=200 Identities=12% Similarity=0.082 Sum_probs=146.6
Q ss_pred CceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeec----C---CCceEEEEECCCCCccccccCCCCcc
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAK----S---FPNYAFVYDSTDQSWSKFDIDGFPSM 192 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~----~---~~~~~~vy~s~~~~W~~~~~~~~p~~ 192 (372)
.+.+.+|||.+++|..+++++.++....++.... +|+++||. . ....+++||+.+++|+.++ .+|.
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~----~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~- 110 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGG----LLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA--PMSV- 110 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT----EEEEECCEEEETTEEEECCCEEEEETTTTEEEECC--CCSS-
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEECC----EEEEECCCcCCCCCCeecceEEEECCCCCeEeECC--CCCc-
Confidence 3579999999999999998887766554443322 78888875 2 2347999999999999998 6664
Q ss_pred ccccCCCcccEEECCEEEEeeeC-----CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEe
Q 017381 193 ILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGG 267 (372)
Q Consensus 193 ~~~~~~~~~~v~~~G~~y~~~~~-----~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~ 267 (372)
.+..+..+.++|++|.+++. ...+..||+.+++|+.+. + +|..+..+..+. .+++||++++
T Consensus 111 ---~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG 176 (308)
T 1zgk_A 111 ---PRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA-P-------MLTRRIGVGVAV---LNRLLYAVGG 176 (308)
T ss_dssp ---CCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECC-C-------CSSCCBSCEEEE---ETTEEEEECC
T ss_pred ---CccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECC-C-------CCccccceEEEE---ECCEEEEEeC
Confidence 23456678889999999762 245899999999999874 4 666665556663 8999999998
Q ss_pred eecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCc
Q 017381 268 VGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRT 341 (372)
Q Consensus 268 ~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~ 341 (372)
...... .-++|.+|..++ |+++..+|.. .....++..++.||+.++. ...+.+||+++++
T Consensus 177 ~~~~~~--~~~~~~yd~~~~~W~~~~~~p~~------------r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 177 FDGTNR--LNSAECYYPERNEWRMITAMNTI------------RSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp BCSSCB--CCCEEEEETTTTEEEECCCCSSC------------CBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCCc--CceEEEEeCCCCeEeeCCCCCCc------------cccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 543222 234666666655 9998877632 1123344558889998753 2569999999999
Q ss_pred eEECCCCCCCCCC
Q 017381 342 WHWLPSCPSLPHK 354 (372)
Q Consensus 342 w~~v~~~~~~~~~ 354 (372)
|+.++.+|.++..
T Consensus 243 W~~~~~~p~~r~~ 255 (308)
T 1zgk_A 243 WTFVAPMKHRRSA 255 (308)
T ss_dssp EEECCCCSSCCBS
T ss_pred EEECCCCCCCccc
Confidence 9999988876643
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.77 E-value=1.2e-16 Score=144.25 Aligned_cols=199 Identities=13% Similarity=0.078 Sum_probs=146.4
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCC---CceEEEEECCCCC---ccccccCCCCcccc
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF---PNYAFVYDSTDQS---WSKFDIDGFPSMIL 194 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~---~~~~~vy~s~~~~---W~~~~~~~~p~~~~ 194 (372)
+.+++|||.+++|..+++++.++.....+... -+|+++|+... ...+++||+.+++ |+.+. .+|.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~----~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~--~~p~--- 101 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLH----DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA--PMNV--- 101 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEET----TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC--CCSS---
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEEC----CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECC--CCCC---
Confidence 57899999999999999887765544443332 27898888542 3589999999999 99998 6665
Q ss_pred ccCCCcccEEECCEEEEeeeC-----CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeee
Q 017381 195 SQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVG 269 (372)
Q Consensus 195 ~~~~~~~~v~~~G~~y~~~~~-----~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~ 269 (372)
.+..+..+.++|++|.+++. ...+..||+.+++|+.+. + +|..+..+..++ .+|+||++++..
T Consensus 102 -~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iyv~GG~~ 169 (301)
T 2vpj_A 102 -RRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG-D-------MQTAREGAGLVV---ASGVIYCLGGYD 169 (301)
T ss_dssp -CCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE-E-------CSSCCBSCEEEE---ETTEEEEECCBC
T ss_pred -CccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECC-C-------CCCCcccceEEE---ECCEEEEECCCC
Confidence 23456678899999999862 246899999999999874 4 666655566664 899999999854
Q ss_pred cCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCceE
Q 017381 270 RNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTWH 343 (372)
Q Consensus 270 ~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w~ 343 (372)
... ..-++|.+|..+. |+++..+|... ....++..++.||+.++. ...+.+||+++++|+
T Consensus 170 ~~~--~~~~~~~~d~~~~~W~~~~~~p~~r------------~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 170 GLN--ILNSVEKYDPHTGHWTNVTPMATKR------------SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp SSC--BCCCEEEEETTTTEEEEECCCSSCC------------BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCc--ccceEEEEeCCCCcEEeCCCCCccc------------ccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 322 2335666676655 99997776321 223345568889998753 346999999999999
Q ss_pred ECCCCCCCCCC
Q 017381 344 WLPSCPSLPHK 354 (372)
Q Consensus 344 ~v~~~~~~~~~ 354 (372)
.++.+|.++..
T Consensus 236 ~~~~~p~~r~~ 246 (301)
T 2vpj_A 236 TVTSMTTPRCY 246 (301)
T ss_dssp EECCCSSCCBS
T ss_pred ECCCCCCcccc
Confidence 99988876644
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.76 E-value=2.1e-16 Score=146.17 Aligned_cols=247 Identities=11% Similarity=0.043 Sum_probs=159.1
Q ss_pred EEEEeCCCCCCccccccCC--CCCeeeecCCCCCC-CCCceEEEEecCcEEEEecCC----------CceEEEEeccccc
Q 017381 66 FILLSHPQCYDQYPLYDST--HGTWRRLSLPYSLL-LPSAATLLSSSKGLLCFSLPS----------SSSFLVCNLVTLS 132 (372)
Q Consensus 66 ~~~~~~~~~~~~~~~~d~~--~~~w~~l~~~~~~~-~~~~~~~~~s~~Gll~~~~~~----------~~~~~v~NP~t~~ 132 (372)
++++.+ .....+..||+. .++|..++ ++| ..+..+.++..+|.|++.++. .+.+++|||.+++
T Consensus 22 iyv~GG-~~~~~~~~~d~~~~~~~W~~~~---~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 22 VYIGLG-SAGTAWYKLDTQAKDKKWTALA---AFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp EEEECG-GGTTCEEEEETTSSSCCEEECC---CCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred EEEEeC-cCCCeEEEEccccCCCCeeECC---CCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 444432 223456788987 48999885 223 234445556667866665543 2478999999999
Q ss_pred eeccCCCC-CCCCceeEEEEeCCCCEEEEEEeecCC-------------------------------------CceEEEE
Q 017381 133 SRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSF-------------------------------------PNYAFVY 174 (372)
Q Consensus 133 ~~~lP~~~-~~~~~~~~~~~~~~~~ykvv~~~~~~~-------------------------------------~~~~~vy 174 (372)
|..+++++ .++..+..+... -+|+++||... ...+++|
T Consensus 98 W~~~~~~~p~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~y 173 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFVHN----GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSF 173 (357)
T ss_dssp EEECSCCCSSCCSSEEEEEET----TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEE
T ss_pred EEECCCCCCcccccceEEEEC----CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEE
Confidence 99999887 444433333222 28999987531 3589999
Q ss_pred ECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeC------CcEEEEEec--CCCeeeccCCCCccccccC--C
Q 017381 175 DSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE------PFSIVRFDL--ENGIWETPNDANDHMTMML--P 244 (372)
Q Consensus 175 ~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~------~~~i~~yD~--~~~~w~~i~~p~~~~~~~~--p 244 (372)
|+.+++|+.+. .+|. +....+..+.++|++|++++. ...+..||+ .+++|+.+. + + |
T Consensus 174 d~~~~~W~~~~--~~p~---~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~-~-------~~~~ 240 (357)
T 2uvk_A 174 DPSTQQWSYAG--ESPW---YGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA-P-------VSSP 240 (357)
T ss_dssp ETTTTEEEEEE--ECSS---CCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECC-C-------SSTT
T ss_pred eCCCCcEEECC--CCCC---CCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecC-C-------CCCC
Confidence 99999999998 5653 122336678899999999752 235788887 899999864 3 3 3
Q ss_pred CcccccceeeeccCCCeEEEEEeeecCC---------------ccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccC
Q 017381 245 HELTFFRLVNDGEESNKLYLIGGVGRNG---------------ISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYH 308 (372)
Q Consensus 245 ~~~~~~~lv~e~~~~g~L~vv~~~~~~~---------------~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~ 308 (372)
..+..+.+++ .+|+||++++..... ......++.+|..+. |+++..+|...
T Consensus 241 ~~~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---------- 307 (357)
T 2uvk_A 241 DGVAGGFAGI---SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR---------- 307 (357)
T ss_dssp TCCBSCEEEE---ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC----------
T ss_pred cccccceEEE---ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc----------
Confidence 4343444553 899999999864211 111235566666655 99998887431
Q ss_pred CCceEEEEeeCCEEEEEeecC------CeEEEEECCCCceEECCCC
Q 017381 309 NYDHVYCFWHQGMICVCCYTW------PEILYYNVARRTWHWLPSC 348 (372)
Q Consensus 309 ~~~~~~~~~~~~~i~~~~~~~------~~v~~yd~~~~~w~~v~~~ 348 (372)
....++..++.||+.++.. +.+..+++++++|......
T Consensus 308 --~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 308 --AYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp --BSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred --ccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 1233455688888887532 3488899999999986633
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.75 E-value=1.2e-16 Score=145.45 Aligned_cols=202 Identities=15% Similarity=0.179 Sum_probs=143.2
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeec-----CC----CceEEEEECCCCCccccccCCCCc
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAK-----SF----PNYAFVYDSTDQSWSKFDIDGFPS 191 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~-----~~----~~~~~vy~s~~~~W~~~~~~~~p~ 191 (372)
+.+.+|||.+++|.. ++++.+..+..++.+.. .-+|+++||. .. ...+++||+.+++|+.++ .+|.
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~--~~p~ 87 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTK--ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP--PLPS 87 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECT--TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC--CBSS
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEE--CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC--CCCc
Confidence 679999999999987 55544333444444432 2278888874 11 125899999999999988 6664
Q ss_pred cccccCCCcccEEECCEEEEeeeC--------CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEE
Q 017381 192 MILSQSSHQEGVFYKGSLYFTTPE--------PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (372)
Q Consensus 192 ~~~~~~~~~~~v~~~G~~y~~~~~--------~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~ 263 (372)
.+..+..+.++|++|++++. ...+..||+.+++|+.+. + +|..+..+..++ .+++||
T Consensus 88 ----~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~-~-------~p~~r~~~~~~~---~~~~iy 152 (315)
T 4asc_A 88 ----PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD-P-------LPYVVYGHTVLS---HMDLVY 152 (315)
T ss_dssp ----CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECC-C-------CSSCCBSCEEEE---ETTEEE
T ss_pred ----chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECC-C-------CCCcccceeEEE---ECCEEE
Confidence 23456788899999999862 145899999999999874 5 676666666664 899999
Q ss_pred EEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecC-----CeEEEEEC
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW-----PEILYYNV 337 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~v~~yd~ 337 (372)
++++... .....-++|.+|..+. |+++..+|.. +....++..++.||+.++.. ..+.+||+
T Consensus 153 v~GG~~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~------------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 219 (315)
T 4asc_A 153 VIGGKGS-DRKCLNKMCVYDPKKFEWKELAPMQTA------------RSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSI 219 (315)
T ss_dssp EECCBCT-TSCBCCCEEEEETTTTEEEECCCCSSC------------CBSCEEEEETTEEEEEEEECSSSEEEEEEEEET
T ss_pred EEeCCCC-CCcccceEEEEeCCCCeEEECCCCCCc------------hhceEEEEECCEEEEEeccCCCCccceEEEEEC
Confidence 9998632 1122335677776665 9998877632 12233455688899987532 35899999
Q ss_pred CCCceEECCCCCCCCCCC
Q 017381 338 ARRTWHWLPSCPSLPHKW 355 (372)
Q Consensus 338 ~~~~w~~v~~~~~~~~~~ 355 (372)
++++|+.++.+|.++..+
T Consensus 220 ~~~~W~~~~~~p~~r~~~ 237 (315)
T 4asc_A 220 TDNKWAPFEAFPQERSSL 237 (315)
T ss_dssp TTTEEEEECCCSSCCBSC
T ss_pred CCCeEEECCCCCCcccce
Confidence 999999999888776543
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.74 E-value=3.1e-16 Score=142.76 Aligned_cols=209 Identities=11% Similarity=0.200 Sum_probs=143.7
Q ss_pred cEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecC----C-----CceEEEEECCCCCc
Q 017381 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS----F-----PNYAFVYDSTDQSW 181 (372)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~----~-----~~~~~vy~s~~~~W 181 (372)
+.|++.++ ..+.+|||.+++|...+ ++.+..+...+.+.. .-+|+++||.. . ...+++||+.+++|
T Consensus 16 ~~i~~~GG--~~~~~yd~~~~~W~~~~-~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 16 DLILLVND--TAAVAYDPMENECYLTA-LAEQIPRNHSSIVTQ--QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEEEECS--SEEEEEETTTTEEEEEE-ECTTSCSSEEEEECS--SSCEEEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred chhhhccc--cceEEECCCCCceeccc-CCccCCccceEEEEE--CCEEEEECCcccCccccCCCccccEEEEeCCCCcE
Confidence 34444443 45889999999998843 332222233333322 22788888832 1 12489999999999
Q ss_pred cccccCCCCccccccCCCcccEEECCEEEEeeeCC-------cEEEEEecCCCeeeccCCCCccccccCCCcccccceee
Q 017381 182 SKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEP-------FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVN 254 (372)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~-------~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~ 254 (372)
+.++ .+|. .+..+..+.++|++|++++.. ..+.+||+.+++|+.+. + +|..+..+.+++
T Consensus 91 ~~~~--~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~-------~p~~r~~~~~~~ 156 (318)
T 2woz_A 91 VGLP--PLPS----ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVK-N-------LPIKVYGHNVIS 156 (318)
T ss_dssp EECS--CBSS----CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEEC-C-------CSSCEESCEEEE
T ss_pred EECC--CCCc----cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECC-C-------CCCcccccEEEE
Confidence 9998 6665 234567788999999998631 35899999999999874 4 676666566664
Q ss_pred eccCCCeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----
Q 017381 255 DGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT----- 328 (372)
Q Consensus 255 e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 328 (372)
.+|+||++++..... ...-++|.+|..++ |+++..+|.. +....++..++.||+.++.
T Consensus 157 ---~~~~iyv~GG~~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~------------r~~~~~~~~~~~iyv~GG~~~~~~ 220 (318)
T 2woz_A 157 ---HNGMIYCLGGKTDDK-KCTNRVFIYNPKKGDWKDLAPMKTP------------RSMFGVAIHKGKIVIAGGVTEDGL 220 (318)
T ss_dssp ---ETTEEEEECCEESSS-CBCCCEEEEETTTTEEEEECCCSSC------------CBSCEEEEETTEEEEEEEEETTEE
T ss_pred ---ECCEEEEEcCCCCCC-CccceEEEEcCCCCEEEECCCCCCC------------cccceEEEECCEEEEEcCcCCCCc
Confidence 899999999864221 12235667777665 9999877632 1223345568889998753
Q ss_pred CCeEEEEECCCCceEECCCCCCCCCC
Q 017381 329 WPEILYYNVARRTWHWLPSCPSLPHK 354 (372)
Q Consensus 329 ~~~v~~yd~~~~~w~~v~~~~~~~~~ 354 (372)
...+.+||+++++|+.++.+|.++..
T Consensus 221 ~~~~~~yd~~~~~W~~~~~~p~~r~~ 246 (318)
T 2woz_A 221 SASVEAFDLKTNKWEVMTEFPQERSS 246 (318)
T ss_dssp EEEEEEEETTTCCEEECCCCSSCCBS
T ss_pred cceEEEEECCCCeEEECCCCCCcccc
Confidence 23588999999999999988876654
No 15
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.63 E-value=1.7e-14 Score=144.21 Aligned_cols=250 Identities=11% Similarity=0.014 Sum_probs=156.6
Q ss_pred cccccCCCCCeeee-cCCCCCCCCCceEEEEe-cCcEEEEecCC-----------CceEEEEeccccceeccCCCCCCCC
Q 017381 78 YPLYDSTHGTWRRL-SLPYSLLLPSAATLLSS-SKGLLCFSLPS-----------SSSFLVCNLVTLSSRTIDFPTYPFD 144 (372)
Q Consensus 78 ~~~~d~~~~~w~~l-~~~~~~~~~~~~~~~~s-~~Gll~~~~~~-----------~~~~~v~NP~t~~~~~lP~~~~~~~ 144 (372)
+..||+..++|..+ ++|. ........ .+|-|++.++. ...+.+|||.|++|..+++++.++.
T Consensus 168 ~~~~dp~~~~W~~~~~~P~-----~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~ 242 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPI-----VPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD 242 (656)
T ss_dssp CCCCCTTSCEEEEEEECSS-----CCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC
T ss_pred cccCCCCCCeeeeeccCCC-----CceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC
Confidence 45689999999976 3442 12222222 27755554321 1268899999999999988766554
Q ss_pred ceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccEEE-CCEEEEeeeC-C-----c
Q 017381 145 FELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY-KGSLYFTTPE-P-----F 217 (372)
Q Consensus 145 ~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~-~G~~y~~~~~-~-----~ 217 (372)
..+.+.... .+-+|+++||... ..+++||+.+++|+... .+|. .+..+..+.+ +|++|.+++. . .
T Consensus 243 ~~~~~~~~~-~~g~lyv~GG~~~-~~v~~yd~~t~~W~~~~--~~~~----~R~~~s~~~~~dg~iyv~GG~~~~~~~~~ 314 (656)
T 1k3i_A 243 MFCPGISMD-GNGQIVVTGGNDA-KKTSLYDSSSDSWIPGP--DMQV----ARGYQSSATMSDGRVFTIGGSWSGGVFEK 314 (656)
T ss_dssp CSSCEEEEC-TTSCEEEECSSST-TCEEEEEGGGTEEEECC--CCSS----CCSSCEEEECTTSCEEEECCCCCSSSCCC
T ss_pred CccccccCC-CCCCEEEeCCCCC-CceEEecCcCCceeECC--CCCc----cccccceEEecCCeEEEEeCcccCCcccc
Confidence 433222211 1227899988543 37999999999999998 6664 2345667777 9999999872 1 4
Q ss_pred EEEEEecCCCeeeccC----CCCccccccCCCc-----------------------------------------------
Q 017381 218 SIVRFDLENGIWETPN----DANDHMTMMLPHE----------------------------------------------- 246 (372)
Q Consensus 218 ~i~~yD~~~~~w~~i~----~p~~~~~~~~p~~----------------------------------------------- 246 (372)
.+..||+.+++|+.+. .| ++..
T Consensus 315 ~~e~yd~~t~~W~~~~~~~~~p-------~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~ 387 (656)
T 1k3i_A 315 NGEVYSPSSKTWTSLPNAKVNP-------MLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGK 387 (656)
T ss_dssp CEEEEETTTTEEEEETTSCSGG-------GCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEE
T ss_pred cceEeCCCCCcceeCCCccccc-------cccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCc
Confidence 6899999999999852 12 1110
Q ss_pred ----------ccccceeeeccCCCeEEEEEeeecCC----ccceEEEEEEcCCCC-EEEEE--ecChHHHHHhhhhccCC
Q 017381 247 ----------LTFFRLVNDGEESNKLYLIGGVGRNG----ISTTMKLWELGCGGN-WIEVE--RVPEMMCRKFMSVCYHN 309 (372)
Q Consensus 247 ----------~~~~~lv~e~~~~g~L~vv~~~~~~~----~~~~i~vw~l~~~~~-W~~v~--~lp~~~~~~~~~~~~~~ 309 (372)
......+.-...+|+|+++++..... ......++.+|.... |+++. .||...
T Consensus 388 ~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R----------- 456 (656)
T 1k3i_A 388 RQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFAR----------- 456 (656)
T ss_dssp CEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCC-----------
T ss_pred cccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCc-----------
Confidence 00011110001489999999853111 111224555666655 99886 665321
Q ss_pred CceEEEEeeCCEEEEEeecC-----------CeEEEEECCCCceEECCCCCCCCCCCccc
Q 017381 310 YDHVYCFWHQGMICVCCYTW-----------PEILYYNVARRTWHWLPSCPSLPHKWSCG 358 (372)
Q Consensus 310 ~~~~~~~~~~~~i~~~~~~~-----------~~v~~yd~~~~~w~~v~~~~~~~~~~~~~ 358 (372)
.....++..+++||+.++.. ..+.+||+++++|+.++.+|.++.-+++.
T Consensus 457 ~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a 516 (656)
T 1k3i_A 457 TFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSIS 516 (656)
T ss_dssp BSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEE
T ss_pred ccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHh
Confidence 11222333377788887522 45899999999999999988887766544
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.59 E-value=2.1e-13 Score=136.83 Aligned_cols=213 Identities=8% Similarity=0.078 Sum_probs=139.6
Q ss_pred EecCcEEEEecC----CCceEEEEeccccceeccC-C-----CCCCCCceeEEEEeCCCCEEEEEEeecCC----CceEE
Q 017381 107 SSSKGLLCFSLP----SSSSFLVCNLVTLSSRTID-F-----PTYPFDFELLTLVSTPSGYKIFMLFAKSF----PNYAF 172 (372)
Q Consensus 107 ~s~~Gll~~~~~----~~~~~~v~NP~t~~~~~lP-~-----~~~~~~~~~~~~~~~~~~ykvv~~~~~~~----~~~~~ 172 (372)
++.++.|++.++ ..+.+++|||.+++|..++ + ++.++..+..+..... -+|+++||... ...++
T Consensus 394 ~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~--~~lyv~GG~~~~~~~~~dv~ 471 (695)
T 2zwa_A 394 DVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRN--NQLLLIGGRKAPHQGLSDNW 471 (695)
T ss_dssp EECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTT--TEEEEECCBSSTTCBCCCCE
T ss_pred EEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccC--CEEEEEcCCCCCCCccccEE
Confidence 336665655554 2357999999999999998 5 3444444444433101 27999998643 34899
Q ss_pred EEECCCCCccccccCCCCccccccCCCcccEEE-CCEEEEeeeCC--cEEEEEecCCCeeeccCCCCccccccCCCcccc
Q 017381 173 VYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY-KGSLYFTTPEP--FSIVRFDLENGIWETPNDANDHMTMMLPHELTF 249 (372)
Q Consensus 173 vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~-~G~~y~~~~~~--~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~ 249 (372)
+||+.+++|+.+. .+|. .+..+.++.+ +|++|++++.. ..+.+||+.+++|+.+...+. +|..+..
T Consensus 472 ~yd~~t~~W~~~~--~~p~----~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~-----~p~~r~~ 540 (695)
T 2zwa_A 472 IFDMKTREWSMIK--SLSH----TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDE-----FFQNSLV 540 (695)
T ss_dssp EEETTTTEEEECC--CCSB----CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSG-----GGGSCCB
T ss_pred EEeCCCCcEEECC--CCCC----CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCC-----CCCcccc
Confidence 9999999999998 6765 2345666775 99999998632 159999999999998753211 4444444
Q ss_pred cceeeeccCC---CeEEEEEeeecCC--ccceEEEEEEcCCCC-----EEEEEecChHHHHHhhhhccCCCceEEEEeeC
Q 017381 250 FRLVNDGEES---NKLYLIGGVGRNG--ISTTMKLWELGCGGN-----WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQ 319 (372)
Q Consensus 250 ~~lv~e~~~~---g~L~vv~~~~~~~--~~~~i~vw~l~~~~~-----W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~ 319 (372)
+..++ ++ |+||++||....+ ....+.+|.++.... |+++..+|.. .+....++..+
T Consensus 541 ~~a~v---~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~-----------~R~~~~~~~~~ 606 (695)
T 2zwa_A 541 SAGLE---FDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF-----------QRYGSQIKYIT 606 (695)
T ss_dssp SCEEE---EETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG-----------CCBSCEEEEEE
T ss_pred eeEEE---EeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC-----------CcccceEEEeC
Confidence 44232 34 9999999864322 234566666644331 8988875421 11122334444
Q ss_pred -CEEEEEeec--------CCeEEEEECCCCceEECC
Q 017381 320 -GMICVCCYT--------WPEILYYNVARRTWHWLP 346 (372)
Q Consensus 320 -~~i~~~~~~--------~~~v~~yd~~~~~w~~v~ 346 (372)
+.||+.++. ...+.+||+++++|+.++
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~ 642 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP 642 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee
Confidence 889998753 346999999999999654
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.48 E-value=1.7e-12 Score=130.18 Aligned_cols=201 Identities=9% Similarity=0.034 Sum_probs=133.7
Q ss_pred CccccccCCCCCeeeecCC---CCCCCCCceEEEEec--CcEEEEecCC------CceEEEEeccccceeccCCCCCCCC
Q 017381 76 DQYPLYDSTHGTWRRLSLP---YSLLLPSAATLLSSS--KGLLCFSLPS------SSSFLVCNLVTLSSRTIDFPTYPFD 144 (372)
Q Consensus 76 ~~~~~~d~~~~~w~~l~~~---~~~~~~~~~~~~~s~--~Gll~~~~~~------~~~~~v~NP~t~~~~~lP~~~~~~~ 144 (372)
..+..||+..++|..++++ ..++..+..+..+.. +|-|++.++. .+.+++|||.+++|..+++++.++.
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 3467799999999988733 123445555555666 7866665541 2478999999999999999887766
Q ss_pred ceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCC---CCccccccCCCcccEEEC---CEEEEeeeC---
Q 017381 145 FELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG---FPSMILSQSSHQEGVFYK---GSLYFTTPE--- 215 (372)
Q Consensus 145 ~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~---~p~~~~~~~~~~~~v~~~---G~~y~~~~~--- 215 (372)
.+..+... .-+|+++||......+++||+.+++|+.+. . +|. .+..+.+++++ |++|++++.
T Consensus 492 ~h~~~~~~---~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~--~~g~~p~----~r~~~~a~v~~~~~~~iyv~GG~~~~ 562 (695)
T 2zwa_A 492 RHSACSLP---DGNVLILGGVTEGPAMLLYNVTEEIFKDVT--PKDEFFQ----NSLVSAGLEFDPVSKQGIILGGGFMD 562 (695)
T ss_dssp SCEEEECT---TSCEEEECCBCSSCSEEEEETTTTEEEECC--CSSGGGG----SCCBSCEEEEETTTTEEEEECCBCTT
T ss_pred cceEEEEc---CCEEEEECCCCCCCCEEEEECCCCceEEcc--CCCCCCC----cccceeEEEEeCCCCEEEEECCcCCC
Confidence 55544421 227899988654448999999999999887 3 222 22345556667 899999863
Q ss_pred ----CcEEEEEecCCCe------eeccCCCCccccccCC-CcccccceeeeccCC-CeEEEEEeeecCCc-cceEEEEEE
Q 017381 216 ----PFSIVRFDLENGI------WETPNDANDHMTMMLP-HELTFFRLVNDGEES-NKLYLIGGVGRNGI-STTMKLWEL 282 (372)
Q Consensus 216 ----~~~i~~yD~~~~~------w~~i~~p~~~~~~~~p-~~~~~~~lv~e~~~~-g~L~vv~~~~~~~~-~~~i~vw~l 282 (372)
...+.+||+.+++ |+.+. + +| ..+..+.+++ .+ |+||++||...... ...-+||.+
T Consensus 563 ~~~~~~~v~~yd~~~~~w~~~~~W~~~~-~-------~p~~~R~~~~~~~---~~~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 563 QTTVSDKAIIFKYDAENATEPITVIKKL-Q-------HPLFQRYGSQIKY---ITPRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp SSCBCCEEEEEEECTTCSSCCEEEEEEE-E-------CGGGCCBSCEEEE---EETTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred CCeeeCcEEEEEccCCccccceEEEEcC-C-------CCCCCcccceEEE---eCCCEEEEECCccCCCCCCCCCeEEEE
Confidence 2468999999999 77653 1 22 3333444453 67 99999998542211 122345666
Q ss_pred cCCCC-EEEEEecChH
Q 017381 283 GCGGN-WIEVERVPEM 297 (372)
Q Consensus 283 ~~~~~-W~~v~~lp~~ 297 (372)
|..+. |+.+ .+|..
T Consensus 632 d~~t~~W~~~-~~p~~ 646 (695)
T 2zwa_A 632 DPLSETLTSI-PISRR 646 (695)
T ss_dssp ETTTTEEEEC-CCCHH
T ss_pred ECCCCeEEEe-ecccc
Confidence 66655 9943 45543
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.32 E-value=1.1e-10 Score=116.69 Aligned_cols=204 Identities=12% Similarity=0.068 Sum_probs=126.8
Q ss_pred ccccccCCCCCeeeec-CCCCCCCCCceEEEEecCcEEEEecC-CCceEEEEeccccceeccCCCCCCCCceeEEEEeCC
Q 017381 77 QYPLYDSTHGTWRRLS-LPYSLLLPSAATLLSSSKGLLCFSLP-SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTP 154 (372)
Q Consensus 77 ~~~~~d~~~~~w~~l~-~~~~~~~~~~~~~~~s~~Gll~~~~~-~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~ 154 (372)
....||+..++|..++ +|... ...........+|.|++.++ ....+.+|||.|++|..+++++.++..+..+...
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~-~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~-- 296 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKH-DMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMS-- 296 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSC-CCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECT--
T ss_pred EEEEEeCCCCcEEeCcccCCCC-CCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEec--
Confidence 3567999999998774 22111 11122234456786666654 4458999999999999999988776655444321
Q ss_pred CCEEEEEEeec-C---CCceEEEEECCCCCccccccC---CCCccc-------------cc-------------------
Q 017381 155 SGYKIFMLFAK-S---FPNYAFVYDSTDQSWSKFDID---GFPSMI-------------LS------------------- 195 (372)
Q Consensus 155 ~~ykvv~~~~~-~---~~~~~~vy~s~~~~W~~~~~~---~~p~~~-------------~~------------------- 195 (372)
+-+|+++||. . ....+++||+.+++|+.+... .++... +.
T Consensus 297 -dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd 375 (656)
T 1k3i_A 297 -DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYY 375 (656)
T ss_dssp -TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEE
T ss_pred -CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeee
Confidence 1279999883 2 235899999999999886310 122100 00
Q ss_pred ---------------------cCCCcccEE---ECCEEEEeeeCC--------c---EEEEEecCCCeeeccC-CCCccc
Q 017381 196 ---------------------QSSHQEGVF---YKGSLYFTTPEP--------F---SIVRFDLENGIWETPN-DANDHM 239 (372)
Q Consensus 196 ---------------------~~~~~~~v~---~~G~~y~~~~~~--------~---~i~~yD~~~~~w~~i~-~p~~~~ 239 (372)
......++. .+|++|.+++.. . .+..||+.+++|..+. .+
T Consensus 376 ~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~---- 451 (656)
T 1k3i_A 376 TSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNG---- 451 (656)
T ss_dssp CSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTC----
T ss_pred cCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCC----
Confidence 000111222 389999998631 1 5889999999998763 23
Q ss_pred cccCCCcccccceeeeccCCCeEEEEEeeecC------CccceEEEEEEcCCCC-EEEEEecC
Q 017381 240 TMMLPHELTFFRLVNDGEESNKLYLIGGVGRN------GISTTMKLWELGCGGN-WIEVERVP 295 (372)
Q Consensus 240 ~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~------~~~~~i~vw~l~~~~~-W~~v~~lp 295 (372)
+|..+..+..+.. .+|+|+++++.... .....+++| |..++ |+++..++
T Consensus 452 ---mp~~R~~~~~~~l--~~g~i~v~GG~~~~~~~~~~~~~~~v~~y--dp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 452 ---LYFARTFHTSVVL--PDGSTFITGGQRRGIPFEDSTPVFTPEIY--VPEQDTFYKQNPNS 507 (656)
T ss_dssp ---CSSCCBSCEEEEC--TTSCEEEECCBSBCCTTCCCSBCCCCEEE--EGGGTEEEECCCCS
T ss_pred ---CCCCcccCCeEEC--CCCCEEEECCcccCcCcCCCCcccceEEE--cCCCCceeecCCCC
Confidence 6766655554431 39999999985321 112345555 44444 99887665
No 19
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.09 E-value=6.2e-11 Score=76.99 Aligned_cols=44 Identities=32% Similarity=0.511 Sum_probs=38.4
Q ss_pred ChhhhcCCCHHHHHHHHccCCchhhhHHhhchhhhhhcccChhh
Q 017381 9 DPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPSF 52 (372)
Q Consensus 9 ~~~~~~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~~i~~~~F 52 (372)
.+..|..||+|++.+||++||.+++.++++|||+|+.++.++.|
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~l 48 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGG
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHH
Confidence 34578999999999999999999999999999999999988765
No 20
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.89 E-value=3.7e-10 Score=99.53 Aligned_cols=52 Identities=25% Similarity=0.293 Sum_probs=46.4
Q ss_pred CChhhhcCCCHHHHHHHHccCCchhhh-HHhhchhhhhhcccChhhhcccccc
Q 017381 8 MDPAIWSRLPEDLLDHVLSFLPPKMLL-KLRSTCKHFNSLLFSPSFLSKTKCS 59 (372)
Q Consensus 8 ~~~~~~~~LP~dll~~IL~rLp~~~l~-r~r~Vck~W~~~i~~~~F~~~~~~~ 59 (372)
++...+..||+||+.+||++||+++|+ |+++|||+|+++++++.|-+.+..+
T Consensus 46 ~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~ 98 (297)
T 2e31_A 46 EAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQ 98 (297)
T ss_dssp -CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHH
T ss_pred ccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhc
Confidence 344578899999999999999999999 9999999999999999998887654
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.83 E-value=4.6e-06 Score=78.92 Aligned_cols=40 Identities=10% Similarity=0.280 Sum_probs=37.3
Q ss_pred hhhhcCCCHHHHHHHHccCCchhhhHHhhchhhhhhcccC
Q 017381 10 PAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFS 49 (372)
Q Consensus 10 ~~~~~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~~i~~ 49 (372)
...++.||+|++.+||+.||+++|++++.|||.|+.++.+
T Consensus 12 ~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~ 51 (464)
T 3v7d_B 12 RDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRK 51 (464)
T ss_dssp CCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTT
T ss_pred cCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcC
Confidence 3468899999999999999999999999999999999987
No 22
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.82 E-value=1e-06 Score=83.24 Aligned_cols=202 Identities=17% Similarity=0.112 Sum_probs=101.1
Q ss_pred hhhcCCCHHHHHHHHccCCchhhhHHhhchhhhhhcccChhhhcccccc-CCCCceEEE-EeCC--CC-CCcc-cccc--
Q 017381 11 AIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPSFLSKTKCS-SSAFSCFIL-LSHP--QC-YDQY-PLYD-- 82 (372)
Q Consensus 11 ~~~~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~~i~~~~F~~~~~~~-~~~~~~~~~-~~~~--~~-~~~~-~~~d-- 82 (372)
..++.||+|++.+||+.|++++|+++++|||+|+.++.++.+-+..... ....+...- .... .. ...+ ..|-
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~ 96 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQ 96 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhh
Confidence 4678999999999999999999999999999999999887554432211 100000000 0000 00 0000 0000
Q ss_pred -CCCCCeeeecC--CCCCC-CCC-ceEEEEecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCE
Q 017381 83 -STHGTWRRLSL--PYSLL-LPS-AATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGY 157 (372)
Q Consensus 83 -~~~~~w~~l~~--~~~~~-~~~-~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~y 157 (372)
.....|..-.. ...+. +.. ....+...+.+++... .++.+.+||..+++....-... ......+.+. +
T Consensus 97 ~~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~-~dg~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~--~--- 169 (445)
T 2ovr_B 97 HRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGS-DDNTLKVWSAVTGKCLRTLVGH-TGGVWSSQMR--D--- 169 (445)
T ss_dssp HHHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEE-TTSCEEEEETTTCCEEEECCCC-SSCEEEEEEE--T---
T ss_pred hhhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEE-CCCcEEEEECCCCcEEEEEcCC-CCCEEEEEec--C---
Confidence 00011221111 00111 111 1233444444554443 4689999999888743221110 1111223333 1
Q ss_pred EEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCee
Q 017381 158 KIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 158 kvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
.+++.++ ....+.+||..++.-...- .. .......+..++...+.++....+..||+.+.+-
T Consensus 170 ~~l~s~~--~dg~i~vwd~~~~~~~~~~----~~----h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~ 231 (445)
T 2ovr_B 170 NIIISGS--TDRTLKVWNAETGECIHTL----YG----HTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQC 231 (445)
T ss_dssp TEEEEEE--TTSCEEEEETTTTEEEEEE----CC----CSSCEEEEEEETTEEEEEETTSEEEEEESSSCCE
T ss_pred CEEEEEe--CCCeEEEEECCcCcEEEEE----CC----CCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcE
Confidence 1334333 3357889998876422111 11 0111224445566566666666799999887644
No 23
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.71 E-value=4.2e-07 Score=85.69 Aligned_cols=44 Identities=20% Similarity=0.385 Sum_probs=39.0
Q ss_pred CChhhhcCCCHH----HHHHHHccCCchhhhHHhhchhhhhhcccChh
Q 017381 8 MDPAIWSRLPED----LLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPS 51 (372)
Q Consensus 8 ~~~~~~~~LP~d----ll~~IL~rLp~~~l~r~r~Vck~W~~~i~~~~ 51 (372)
+....++.||+| ++.+||+.|++.+|.++++|||+|+.++.++.
T Consensus 6 ~~~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~ 53 (435)
T 1p22_A 6 LQRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGM 53 (435)
T ss_dssp SCCCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTT
T ss_pred hhcChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChH
Confidence 344567899999 99999999999999999999999999987654
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.83 E-value=5.3e-06 Score=72.36 Aligned_cols=45 Identities=33% Similarity=0.431 Sum_probs=40.2
Q ss_pred hhhcCCCHHHHHHHHccCCchhhhHHhhchhhhhhcccChhhhcc
Q 017381 11 AIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPSFLSK 55 (372)
Q Consensus 11 ~~~~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~~i~~~~F~~~ 55 (372)
..+..||+|++.+||+.|++++++++.+|||.||.+.+++..=+.
T Consensus 3 ~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~ 47 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRY 47 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHH
T ss_pred chhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 457889999999999999999999999999999999998765433
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.60 E-value=2e-05 Score=71.35 Aligned_cols=44 Identities=32% Similarity=0.511 Sum_probs=38.7
Q ss_pred ChhhhcCCCHHHHHHHHccCCchhhhHHhhchhhhhhcccChhh
Q 017381 9 DPAIWSRLPEDLLDHVLSFLPPKMLLKLRSTCKHFNSLLFSPSF 52 (372)
Q Consensus 9 ~~~~~~~LP~dll~~IL~rLp~~~l~r~r~Vck~W~~~i~~~~F 52 (372)
+...|+.||+|++.+||.+|+..++.+++.|||+|+.++.++..
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 34578999999999999999999999999999999999876653
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.25 E-value=9.8e-05 Score=72.28 Aligned_cols=39 Identities=31% Similarity=0.542 Sum_probs=29.4
Q ss_pred CChhhhcCCCHHHHHHHHccCC-chhhhHHhhchhhhhhc
Q 017381 8 MDPAIWSRLPEDLLDHVLSFLP-PKMLLKLRSTCKHFNSL 46 (372)
Q Consensus 8 ~~~~~~~~LP~dll~~IL~rLp-~~~l~r~r~Vck~W~~~ 46 (372)
|+...|+.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 1 ~~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ---------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred CcccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 3456799999999999999999 99999999999999987
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.47 E-value=0.44 Score=42.38 Aligned_cols=241 Identities=14% Similarity=0.119 Sum_probs=120.8
Q ss_pred EEEEeCCCC---CCccccccCCCCCeeeec-CC-CCCCCCCceEEEEecCcEEEEecCCCceEEEEeccccce-eccCCC
Q 017381 66 FILLSHPQC---YDQYPLYDSTHGTWRRLS-LP-YSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFP 139 (372)
Q Consensus 66 ~~~~~~~~~---~~~~~~~d~~~~~w~~l~-~~-~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~~-~~lP~~ 139 (372)
+|+++.+.. ...+.++|+..++...-- .. ...+......-+...++.+++.....+.+.++|+.|++. ..++..
T Consensus 4 ~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~ 83 (328)
T 3dsm_A 4 LFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGF 83 (328)
T ss_dssp EEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECC
T ss_pred EEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCC
Confidence 555554421 235677888776654210 00 000111111122334565555544457899999999886 556432
Q ss_pred CCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeee-CCcE
Q 017381 140 TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTP-EPFS 218 (372)
Q Consensus 140 ~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~-~~~~ 218 (372)
. ....+++++. . ++++... ....+.++|..+++-...- ......-........++-+|.+|.... ....
T Consensus 84 ~---~p~~i~~~~~--g-~lyv~~~--~~~~v~~iD~~t~~~~~~i--~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~ 153 (328)
T 3dsm_A 84 T---SPRYIHFLSD--E-KAYVTQI--WDYRIFIINPKTYEITGYI--ECPDMDMESGSTEQMVQYGKYVYVNCWSYQNR 153 (328)
T ss_dssp S---SEEEEEEEET--T-EEEEEEB--SCSEEEEEETTTTEEEEEE--ECTTCCTTTCBCCCEEEETTEEEEEECTTCCE
T ss_pred C---CCcEEEEeCC--C-eEEEEEC--CCCeEEEEECCCCeEEEEE--EcCCccccCCCcceEEEECCEEEEEcCCCCCE
Confidence 1 1234555433 3 6766552 2468899999887532111 111100000011223346788888765 3568
Q ss_pred EEEEecCCCeeec-cCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCcc---ceEEEEEEcCCCC-EEEEEe
Q 017381 219 IVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGIS---TTMKLWELGCGGN-WIEVER 293 (372)
Q Consensus 219 i~~yD~~~~~w~~-i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~---~~i~vw~l~~~~~-W~~v~~ 293 (372)
|.++|+.+.+... +.... .|. .+... -+|+++++......... ..-.|+.+|..+. ..+.-.
T Consensus 154 v~viD~~t~~~~~~i~~g~------~p~-----~i~~~--~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~ 220 (328)
T 3dsm_A 154 ILKIDTETDKVVDELTIGI------QPT-----SLVMD--KYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK 220 (328)
T ss_dssp EEEEETTTTEEEEEEECSS------CBC-----CCEEC--TTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCeEEEEEEcCC------Ccc-----ceEEc--CCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe
Confidence 9999999876543 22110 222 22223 57999888642100000 0124555555432 333223
Q ss_pred cChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEECCCCceE
Q 017381 294 VPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 294 lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
++.. ....-.++. +++.+|+... .|.++|+++++..
T Consensus 221 ~~~g-----------~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 221 FKLG-----------DWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVP 257 (328)
T ss_dssp CCTT-----------CCCEEEEECTTSCEEEEESS---SEEEEETTCSSCC
T ss_pred cCCC-----------CCceeEEEecCCCEEEEEcc---EEEEEECCCCcee
Confidence 3211 001122333 4677888753 8999999998864
No 28
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.10 E-value=0.56 Score=41.15 Aligned_cols=190 Identities=11% Similarity=0.043 Sum_probs=97.6
Q ss_pred cEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCC
Q 017381 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFP 190 (372)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p 190 (372)
+.+++.....+.+.+||+.+++....-..+. ....+++.+.+. .+++... ....+.+||..++.-.... +.
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~--~l~~~~~--~~~~i~~~d~~~~~~~~~~---~~ 80 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGY--DFVDTAITSDCS--NVVVTSD--FCQTLVQIETQLEPPKVVA---IQ 80 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCC--CEEEEEECSSSC--EEEEEES--TTCEEEEEECSSSSCEEEE---EE
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccC--CcceEEEcCCCC--EEEEEeC--CCCeEEEEECCCCceeEEe---cc
Confidence 3444444345789999999998754433221 112444443332 4454443 2348899999887641111 01
Q ss_pred ccccccCCCcccEEE--CCE-EEEeeeCC-c--EEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe-EE
Q 017381 191 SMILSQSSHQEGVFY--KGS-LYFTTPEP-F--SIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LY 263 (372)
Q Consensus 191 ~~~~~~~~~~~~v~~--~G~-~y~~~~~~-~--~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~ 263 (372)
. ......++.+ +|. +| ..... . .|..||+.+.+..... + ..... ..+... -+|+ |+
T Consensus 81 ~----~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~-~-------~~~~~--~~~~~s--pdg~~l~ 143 (331)
T 3u4y_A 81 E----GQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTI-P-------IPYDA--VGIAIS--PNGNGLI 143 (331)
T ss_dssp E----CSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEE-E-------CCTTE--EEEEEC--TTSSCEE
T ss_pred c----CCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEE-E-------CCCCc--cceEEC--CCCCEEE
Confidence 1 0011221333 454 55 44333 2 7999999877654321 1 11111 122212 4676 66
Q ss_pred EEEeeecCCccce-EEEEEEcCCCCEEEE--EecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEECCC
Q 017381 264 LIGGVGRNGISTT-MKLWELGCGGNWIEV--ERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVAR 339 (372)
Q Consensus 264 vv~~~~~~~~~~~-i~vw~l~~~~~W~~v--~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~ 339 (372)
+... .... +.+|.++..+.-... ..++.. .......+. .+..+|+.....+.|.+||+++
T Consensus 144 ~~~~-----~~~~~i~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 207 (331)
T 3u4y_A 144 LIDR-----SSANTVRRFKIDADGVLFDTGQEFISGG-----------TRPFNITFTPDGNFAFVANLIGNSIGILETQN 207 (331)
T ss_dssp EEEE-----TTTTEEEEEEECTTCCEEEEEEEEECSS-----------SSEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEec-----CCCceEEEEEECCCCcEeecCCccccCC-----------CCccceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 6654 1245 899999866653222 112100 011112333 3446888776677899999998
Q ss_pred Cce
Q 017381 340 RTW 342 (372)
Q Consensus 340 ~~w 342 (372)
++.
T Consensus 208 ~~~ 210 (331)
T 3u4y_A 208 PEN 210 (331)
T ss_dssp TTS
T ss_pred Ccc
Confidence 875
No 29
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.06 E-value=0.0018 Score=63.15 Aligned_cols=33 Identities=15% Similarity=0.430 Sum_probs=31.4
Q ss_pred cCCCHHHHHHHHccC-CchhhhHHhhchhhhhhc
Q 017381 14 SRLPEDLLDHVLSFL-PPKMLLKLRSTCKHFNSL 46 (372)
Q Consensus 14 ~~LP~dll~~IL~rL-p~~~l~r~r~Vck~W~~~ 46 (372)
+.||+|++.+||++| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 579999999999999 899999999999999987
No 30
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.72 E-value=0.37 Score=42.84 Aligned_cols=207 Identities=9% Similarity=0.131 Sum_probs=102.2
Q ss_pred ecCc-EEEEecCCCceEEEEecc-ccceeccCCCCC------C----CCceeEEEEeCCCCEEEEEEeecCCCceEEEEE
Q 017381 108 SSKG-LLCFSLPSSSSFLVCNLV-TLSSRTIDFPTY------P----FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYD 175 (372)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~-t~~~~~lP~~~~------~----~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~ 175 (372)
+-+| .++......+.+.+|+.. +++...+..... . .....+++.+.+. +++... ....+.+|+
T Consensus 94 spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~---l~v~~~--~~~~v~~~~ 168 (347)
T 3hfq_A 94 DEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR---LAVIDL--GSDKVYVYN 168 (347)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC---EEEEET--TTTEEEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc---EEEEeC--CCCEEEEEE
Confidence 4455 555555345778888874 333332221100 0 0112344444332 444332 335788999
Q ss_pred CC-CCCccccccCCCCccccccCCCcccEEE--CCE-EEEeeeCCcEEEEEecC--CCeeeccCCCCccccccCCCc---
Q 017381 176 ST-DQSWSKFDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLE--NGIWETPNDANDHMTMMLPHE--- 246 (372)
Q Consensus 176 s~-~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~-~y~~~~~~~~i~~yD~~--~~~w~~i~~p~~~~~~~~p~~--- 246 (372)
.. +++.........+. . .....+.+ +|+ +|+.......+..||+. +.++..+..-. . .|..
T Consensus 169 ~~~~g~~~~~~~~~~~~----g-~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~----~-~~~~~~~ 238 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEA----G-FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK----T-IPADYTA 238 (347)
T ss_dssp ECTTSCEEEEEEEECCT----T-CCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE----S-SCTTCCS
T ss_pred ECCCCcEEEeeeEEcCC----C-CCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee----e-cCCCCCC
Confidence 87 56554332000111 0 01112333 566 66655555567777765 45554321000 0 2221
Q ss_pred -ccccceeeeccCCCe-EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEE
Q 017381 247 -LTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMIC 323 (372)
Q Consensus 247 -~~~~~lv~e~~~~g~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~ 323 (372)
.....+... -+|+ ||+... ....+.+|.++..+.++.+..++..- ....-.++. ++..+|
T Consensus 239 ~~~~~~i~~s--pdG~~l~v~~~-----~~~~v~v~~~~~~g~~~~~~~~~~~~----------~~~~~~~~spdg~~l~ 301 (347)
T 3hfq_A 239 HNGAAAIRLS--HDGHFLYVSNR-----GYNTLAVFAVTADGHLTLIQQISTEG----------DFPRDFDLDPTEAFVV 301 (347)
T ss_dssp CCEEEEEEEC--TTSCEEEEEEE-----TTTEEEEEEECGGGCEEEEEEEECSS----------SCCCEEEECTTSSEEE
T ss_pred CCcceeEEEC--CCCCEEEEEeC-----CCCEEEEEEECCCCcEEEeEEEecCC----------CCcCeEEECCCCCEEE
Confidence 111122212 5777 555543 23679999997655677666654210 001122333 455688
Q ss_pred EEeecCCeEEEE--ECCCCceEECC
Q 017381 324 VCCYTWPEILYY--NVARRTWHWLP 346 (372)
Q Consensus 324 ~~~~~~~~v~~y--d~~~~~w~~v~ 346 (372)
+.....+.+.+| |.++++.+.+.
T Consensus 302 v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 302 VVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp EEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEEcCCCcEEEEEEeCCCCeEEecc
Confidence 877666778888 77888887654
No 31
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.68 E-value=0.81 Score=39.34 Aligned_cols=151 Identities=11% Similarity=-0.062 Sum_probs=87.1
Q ss_pred EEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCccc-EEECCEEEEeeeCCcEEEEEecCCCeee-ccCCC
Q 017381 158 KIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEG-VFYKGSLYFTTPEPFSIVRFDLENGIWE-TPNDA 235 (372)
Q Consensus 158 kvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~-v~~~G~~y~~~~~~~~i~~yD~~~~~w~-~i~~p 235 (372)
.++...+......+.++|.++++=...- .++. .....+ +..++.+|.++.....+.+||+++.+-. .+.
T Consensus 54 ~LyestG~~g~S~v~~vD~~Tgkv~~~~--~l~~-----~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~-- 124 (262)
T 3nol_A 54 YFYESTGLNGRSSIRKVDIESGKTLQQI--ELGK-----RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFN-- 124 (262)
T ss_dssp EEEEEEEETTEEEEEEECTTTCCEEEEE--ECCT-----TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEE--
T ss_pred EEEEECCCCCCceEEEEECCCCcEEEEE--ecCC-----ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEE--
Confidence 6777666555678999999998643222 2222 122233 4557799999988888999999875543 332
Q ss_pred CccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEE
Q 017381 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC 315 (372)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~ 315 (372)
.+. ....+.. -+++|++..+. . .|+.+|..+. ..+.+++... .+..+...+...+
T Consensus 125 -------~~~--eG~glt~---dg~~L~~SdGs------~--~i~~iDp~T~-~v~~~I~V~~----~g~~~~~lNELe~ 179 (262)
T 3nol_A 125 -------YDG--EGWGLTH---NDQYLIMSDGT------P--VLRFLDPESL-TPVRTITVTA----HGEELPELNELEW 179 (262)
T ss_dssp -------CSS--CCCCEEE---CSSCEEECCSS------S--EEEEECTTTC-SEEEEEECEE----TTEECCCEEEEEE
T ss_pred -------CCC--CceEEec---CCCEEEEECCC------C--eEEEEcCCCC-eEEEEEEecc----CCccccccceeEE
Confidence 222 3344542 35567776541 2 4777776542 1222222110 0000001122333
Q ss_pred EeeCCEEEEEeecCCeEEEEECCCCceEE
Q 017381 316 FWHQGMICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 316 ~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
.++.||+.....+.|.+-|+++++-..
T Consensus 180 --~~G~lyan~w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 180 --VDGEIFANVWQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp --ETTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred --ECCEEEEEEccCCeEEEEECCCCcEEE
Confidence 367899888778899999999986643
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.49 E-value=1 Score=38.31 Aligned_cols=151 Identities=13% Similarity=0.091 Sum_probs=88.2
Q ss_pred EEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCccc-EEECCEEEEeeeCCcEEEEEecCCCeee-ccCCC
Q 017381 158 KIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEG-VFYKGSLYFTTPEPFSIVRFDLENGIWE-TPNDA 235 (372)
Q Consensus 158 kvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~-v~~~G~~y~~~~~~~~i~~yD~~~~~w~-~i~~p 235 (372)
.++...+......+.++|.++++=...- .++. .....+ +..++++|.++.....+.+||.++.+-. .+.
T Consensus 32 ~LyestG~~g~S~v~~vD~~tgkv~~~~--~l~~-----~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~-- 102 (243)
T 3mbr_X 32 HLYESTGETGRSSVRKVDLETGRILQRA--EVPP-----PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFR-- 102 (243)
T ss_dssp EEEEEECCTTSCEEEEEETTTCCEEEEE--ECCT-----TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE--
T ss_pred EEEEECCCCCCceEEEEECCCCCEEEEE--eCCC-----CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEe--
Confidence 6777666556678999999998543332 2332 122233 4567899999988888999999876543 222
Q ss_pred CccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEE
Q 017381 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC 315 (372)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~ 315 (372)
.+ .....+.. -+++|++..+ .. .|+.+|..+. ..+.+++... . +..+.....+.
T Consensus 103 -------~~--~~Gwglt~---dg~~L~vSdg------s~--~l~~iDp~t~-~~~~~I~V~~--~--g~~~~~lNeLe- 156 (243)
T 3mbr_X 103 -------YP--GEGWALTS---DDSHLYMSDG------TA--VIRKLDPDTL-QQVGSIKVTA--G--GRPLDNLNELE- 156 (243)
T ss_dssp -------CS--SCCCEEEE---CSSCEEEECS------SS--EEEEECTTTC-CEEEEEECEE--T--TEECCCEEEEE-
T ss_pred -------CC--CCceEEee---CCCEEEEECC------CC--eEEEEeCCCC-eEEEEEEEcc--C--CcccccceeeE-
Confidence 22 23345552 4667888764 12 4666675542 2222222110 0 00000112222
Q ss_pred EeeCCEEEEEeecCCeEEEEECCCCceEE
Q 017381 316 FWHQGMICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 316 ~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
..++.||......+.|.+-|+++++-..
T Consensus 157 -~~~G~lyanvw~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 157 -WVNGELLANVWLTSRIARIDPASGKVVA 184 (243)
T ss_dssp -EETTEEEEEETTTTEEEEECTTTCBEEE
T ss_pred -EeCCEEEEEECCCCeEEEEECCCCCEEE
Confidence 3477899877677899999999986543
No 33
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.34 E-value=1.4 Score=39.02 Aligned_cols=180 Identities=9% Similarity=0.031 Sum_probs=95.2
Q ss_pred CceEEEEeccccceec-cCCC--CCCC--CceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcc-ccccCCCCccc
Q 017381 120 SSSFLVCNLVTLSSRT-IDFP--TYPF--DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWS-KFDIDGFPSMI 193 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~-lP~~--~~~~--~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~-~~~~~~~p~~~ 193 (372)
.+.+.++||.|++... +... .... ....+.++. . ++++... ....+.++|..+++-. .+. ...
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~---~-~lyv~~~--~~~~v~viD~~t~~~~~~i~--~~~--- 84 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD---G-IGWIVVN--NSHVIFAIDINTFKEVGRIT--GFT--- 84 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET---T-EEEEEEG--GGTEEEEEETTTCCEEEEEE--CCS---
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC---C-EEEEEEc--CCCEEEEEECcccEEEEEcC--CCC---
Confidence 4689999999998653 2100 1111 112333332 2 5665543 2357899999887542 122 110
Q ss_pred cccCCCcccEE-ECCEEEEeeeCCcEEEEEecCCCeeec-cCCCCccccccCCCc---c-cccceeeeccCCCeEEEEEe
Q 017381 194 LSQSSHQEGVF-YKGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHE---L-TFFRLVNDGEESNKLYLIGG 267 (372)
Q Consensus 194 ~~~~~~~~~v~-~~G~~y~~~~~~~~i~~yD~~~~~w~~-i~~p~~~~~~~~p~~---~-~~~~lv~e~~~~g~L~vv~~ 267 (372)
.....++ -+|++|+.......|.++|+.+.+... +. .+.. . .-..++. .+++||+...
T Consensus 85 ----~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~---------~g~~~~~~~~p~~i~~---~~~~lyv~~~ 148 (328)
T 3dsm_A 85 ----SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE---------CPDMDMESGSTEQMVQ---YGKYVYVNCW 148 (328)
T ss_dssp ----SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE---------CTTCCTTTCBCCCEEE---ETTEEEEEEC
T ss_pred ----CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE---------cCCccccCCCcceEEE---ECCEEEEEcC
Confidence 1111233 588998877455679999999876542 22 1110 0 1123442 5889998853
Q ss_pred eecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecC----------CeEEEEEC
Q 017381 268 VGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW----------PEILYYNV 337 (372)
Q Consensus 268 ~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------~~v~~yd~ 337 (372)
+....+.++.++ .++....-..... .. -..+..++.+|+..... +.|.++|+
T Consensus 149 ----~~~~~v~viD~~-t~~~~~~i~~g~~------------p~-~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~ 210 (328)
T 3dsm_A 149 ----SYQNRILKIDTE-TDKVVDELTIGIQ------------PT-SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDA 210 (328)
T ss_dssp ----TTCCEEEEEETT-TTEEEEEEECSSC------------BC-CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEET
T ss_pred ----CCCCEEEEEECC-CCeEEEEEEcCCC------------cc-ceEEcCCCCEEEEECCCccCCccccCCceEEEEEC
Confidence 112455666442 1222221111100 01 11334456778776543 57999999
Q ss_pred CCCceEE
Q 017381 338 ARRTWHW 344 (372)
Q Consensus 338 ~~~~w~~ 344 (372)
++++..+
T Consensus 211 ~t~~v~~ 217 (328)
T 3dsm_A 211 ETFTVEK 217 (328)
T ss_dssp TTTEEEE
T ss_pred CCCeEEE
Confidence 9987753
No 34
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.13 E-value=0.98 Score=39.49 Aligned_cols=189 Identities=9% Similarity=0.053 Sum_probs=87.6
Q ss_pred CceEEEEecc-ccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECC--CCCccccccCCCCcccccc
Q 017381 120 SSSFLVCNLV-TLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDST--DQSWSKFDIDGFPSMILSQ 196 (372)
Q Consensus 120 ~~~~~v~NP~-t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~--~~~W~~~~~~~~p~~~~~~ 196 (372)
++.+.+|+.. +++...+...+.......+++.+.+. .+++... ....+.+|+.. +++++... .++. .
T Consensus 14 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~--~~~~v~~~~~~~~~~~~~~~~--~~~~---~- 83 (343)
T 1ri6_A 14 SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKR--YLYVGVR--PEFRVLAYRIAPDDGALTFAA--ESAL---P- 83 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSS--EEEEEET--TTTEEEEEEECTTTCCEEEEE--EEEC---S-
T ss_pred CCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCC--EEEEeec--CCCeEEEEEecCCCCceeecc--cccc---C-
Confidence 4677777763 44433332211111222344543322 3444332 22577888776 77777654 2221 0
Q ss_pred CCCcccEEE--CCE-EEEeeeCCcEEEEEecCCCe-eeccCCCCccccccCCCcccccceeeeccCCCe-EEEEEeeecC
Q 017381 197 SSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENGI-WETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRN 271 (372)
Q Consensus 197 ~~~~~~v~~--~G~-~y~~~~~~~~i~~yD~~~~~-w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~vv~~~~~~ 271 (372)
.....+.+ +|. +|+.+.....+..||+.+.. ...+. . .+.......+... -+|+ |++...
T Consensus 84 -~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~-~-------~~~~~~~~~~~~s--~dg~~l~~~~~---- 148 (343)
T 1ri6_A 84 -GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVD-V-------VEGLDGCHSANIS--PDNRTLWVPAL---- 148 (343)
T ss_dssp -SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEE-E-------ECCCTTBCCCEEC--TTSSEEEEEEG----
T ss_pred -CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccc-c-------ccCCCCceEEEEC--CCCCEEEEecC----
Confidence 11122333 454 55555445568889884221 11111 0 1111111122212 4665 554432
Q ss_pred CccceEEEEEEcCCCCEEEEE--ecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEECC--CCceE
Q 017381 272 GISTTMKLWELGCGGNWIEVE--RVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVA--RRTWH 343 (372)
Q Consensus 272 ~~~~~i~vw~l~~~~~W~~v~--~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~--~~~w~ 343 (372)
....+.+|.++..++...+. .+.... ........+. .+..+++.....+.+.+||+. +++++
T Consensus 149 -~~~~v~~~d~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 149 -KQDRICLFTVSDDGHLVAQDPAEVTTVE---------GAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp -GGTEEEEEEECTTSCEEEEEEEEEECST---------TCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred -CCCEEEEEEecCCCceeeecccccccCC---------CCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 13578999997546555443 221000 0001112222 445677776566789999995 45543
No 35
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.05 E-value=1.5 Score=37.83 Aligned_cols=181 Identities=10% Similarity=0.034 Sum_probs=86.1
Q ss_pred cCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCC--CccccccCCCCcccc
Q 017381 117 LPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ--SWSKFDIDGFPSMIL 194 (372)
Q Consensus 117 ~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~--~W~~~~~~~~p~~~~ 194 (372)
+...+.+.++|+.|++...--+.+.......+.+.+.+ ++++.. ...+..||+ ++ .|+... .... .
T Consensus 11 ~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG---~ilvs~----~~~V~~~d~-~G~~~W~~~~--~~~~-~- 78 (276)
T 3no2_A 11 GSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG---EILFSY----SKGAKMITR-DGRELWNIAA--PAGC-E- 78 (276)
T ss_dssp CTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS---CEEEEC----BSEEEEECT-TSCEEEEEEC--CTTC-E-
T ss_pred eCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC---CEEEeC----CCCEEEECC-CCCEEEEEcC--CCCc-c-
Confidence 33467889999989883321111110111233333322 344422 256888988 44 376543 1000 0
Q ss_pred ccCCCcccEEECCEEEEeeeC-CcEEEEEecCCC-eeeccCCCCccccccCCCccccccee-eeccCCCeEEEEEeeecC
Q 017381 195 SQSSHQEGVFYKGSLYFTTPE-PFSIVRFDLENG-IWETPNDANDHMTMMLPHELTFFRLV-NDGEESNKLYLIGGVGRN 271 (372)
Q Consensus 195 ~~~~~~~~v~~~G~~y~~~~~-~~~i~~yD~~~~-~w~~i~~p~~~~~~~~p~~~~~~~lv-~e~~~~g~L~vv~~~~~~ 271 (372)
.......-+|.+++.... ...++.+|+.-+ .|+. ..... .+........+ .. .+|.++++..
T Consensus 79 ---~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~-~~~~~-----~~~~~~~~~~v~~~--~~G~~lv~~~---- 143 (276)
T 3no2_A 79 ---MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKT-EFETG-----IERPHAQFRQINKN--KKGNYLVPLF---- 143 (276)
T ss_dssp ---EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEE-EECCS-----CSSGGGSCSCCEEC--TTSCEEEEET----
T ss_pred ---ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEE-eccCC-----CCcccccccCceEC--CCCCEEEEec----
Confidence 011123347777776555 566888887543 2332 11100 11111111111 12 5788776643
Q ss_pred CccceEEEEEEcCCCC--EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCce
Q 017381 272 GISTTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 272 ~~~~~i~vw~l~~~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
....+.+| |..++ |+.-..- ..... .+..++.+++.....+.|+++|+++++.
T Consensus 144 -~~~~v~~~--d~~G~~~w~~~~~~--------------~~~~~-~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 144 -ATSEVREI--APNGQLLNSVKLSG--------------TPFSS-AFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp -TTTEEEEE--CTTSCEEEEEECSS--------------CCCEE-EECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred -CCCEEEEE--CCCCCEEEEEECCC--------------Cccce-eEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 12344444 55565 8743210 01112 2223444666655556799999997754
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.02 E-value=1.8 Score=38.38 Aligned_cols=187 Identities=10% Similarity=0.123 Sum_probs=93.3
Q ss_pred CceEEEEeccccceeccCCCCC-CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCC
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~-~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (372)
++.+.+||...++...+..+.. ......+.+.+.... +.++.++ ....+.+||..++.|.... .... ...
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~--~dg~v~iwd~~~~~~~~~~--~~~~----~~~ 102 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCS--YDGKVLIWKEENGRWSQIA--VHAV----HSA 102 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEE--TTSCEEEEEEETTEEEEEE--EECC----CSS
T ss_pred CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEec--cCCEEEEEEcCCCceeEee--eecC----CCc
Confidence 4678888887544433322211 111223334322112 2333333 2357889999998886665 2221 011
Q ss_pred CcccEEEC----CEEEEeeeCCcEEEEEecCCCeeec-cCCCCccccccCCCcccccceeee-----------ccCCCeE
Q 017381 199 HQEGVFYK----GSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVND-----------GEESNKL 262 (372)
Q Consensus 199 ~~~~v~~~----G~~y~~~~~~~~i~~yD~~~~~w~~-i~~p~~~~~~~~p~~~~~~~lv~e-----------~~~~g~L 262 (372)
....+.+. |.+.+.+.....|..||+.+..-.. ....+ .+... ..+... +.-++.+
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~------~~~~v--~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA------HAIGV--NSASWAPATIEEDGEHNGTKESRK 174 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEEC------CTTCE--EEEEECCCC----------CTTCE
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecC------CCCce--EEEEEcCccccccccccCCCCCCE
Confidence 12233332 5566666666679999987652211 10000 11111 111100 0015777
Q ss_pred EEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEE--eeC---CEEEEEeecCCeEEEEE
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQ---GMICVCCYTWPEILYYN 336 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~---~~i~~~~~~~~~v~~yd 336 (372)
++++.. ...+.+|.+..... |..+..+... ...+.++ ..+ +.+++.....+.|.+||
T Consensus 175 l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~h------------~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 175 FVTGGA-----DNLVKIWKYNSDAQTYVLESTLEGH------------SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp EEEEET-----TSCEEEEEEETTTTEEEEEEEECCC------------SSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred EEEEeC-----CCeEEEEEecCCCcceeeEEEEecc------------cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 776652 35799999975554 7776655311 1123323 233 55566665567899999
Q ss_pred CCCC
Q 017381 337 VARR 340 (372)
Q Consensus 337 ~~~~ 340 (372)
++++
T Consensus 238 ~~~~ 241 (379)
T 3jrp_A 238 QDNE 241 (379)
T ss_dssp ESST
T ss_pred CCCC
Confidence 9986
No 37
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.00 E-value=1.8 Score=38.76 Aligned_cols=191 Identities=8% Similarity=-0.002 Sum_probs=95.8
Q ss_pred EecCc-EEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 107 SSSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 107 ~s~~G-ll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
-+.+| .+++....++.+.+||+.+++....-.... ....+++.+.+. .+++.+. ....+.+||..+++-...-
T Consensus 39 ~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~--~l~~~~~--~~~~v~v~d~~~~~~~~~~ 112 (391)
T 1l0q_A 39 ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGK--QVYVTNM--ASSTLSVIDTTSNTVAGTV 112 (391)
T ss_dssp ECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSS--EEEEEET--TTTEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--CccceEECCCCC--EEEEEEC--CCCEEEEEECCCCeEEEEE
Confidence 34455 555544345789999999988644322211 223344433222 4444432 3357899999887543222
Q ss_pred cCCCCccccccCCCcccEEE--CCE-EEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe-
Q 017381 186 IDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK- 261 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G~-~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~- 261 (372)
... .....+.+ +|. +|+.+.....|..+|+.+.+..... + ..... ..+... -+|+
T Consensus 113 --~~~-------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-~-------~~~~~--~~~~~~--~dg~~ 171 (391)
T 1l0q_A 113 --KTG-------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV-S-------VGRSP--KGIAVT--PDGTK 171 (391)
T ss_dssp --ECS-------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-E-------CCSSE--EEEEEC--TTSSE
T ss_pred --eCC-------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE-e-------cCCCc--ceEEEC--CCCCE
Confidence 111 11123333 454 6666665668999999887654421 1 11111 122211 4565
Q ss_pred EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEee--cCCeEEEEECC
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCY--TWPEILYYNVA 338 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~~v~~yd~~ 338 (372)
|++.+. ....+.+|.+.. + ..+..++.. ......++. .+..+++... ..+.|.+||++
T Consensus 172 l~~~~~-----~~~~v~~~d~~~-~--~~~~~~~~~-----------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 172 VYVANF-----DSMSISVIDTVT-N--SVIDTVKVE-----------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp EEEEET-----TTTEEEEEETTT-T--EEEEEEECS-----------SEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred EEEEeC-----CCCEEEEEECCC-C--eEEEEEecC-----------CCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 444432 235688887642 2 222222110 000111222 3456666654 45689999999
Q ss_pred CCceE
Q 017381 339 RRTWH 343 (372)
Q Consensus 339 ~~~w~ 343 (372)
+++..
T Consensus 233 ~~~~~ 237 (391)
T 1l0q_A 233 TNKIT 237 (391)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 87543
No 38
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.97 E-value=1.7 Score=37.94 Aligned_cols=226 Identities=8% Similarity=0.046 Sum_probs=110.1
Q ss_pred ccccccCCCCCeeee-cCCCCCCCCCceEEEEecCc-EEEEecCCCceEEEEeccccce--eccCCCCCCCCceeEEEEe
Q 017381 77 QYPLYDSTHGTWRRL-SLPYSLLLPSAATLLSSSKG-LLCFSLPSSSSFLVCNLVTLSS--RTIDFPTYPFDFELLTLVS 152 (372)
Q Consensus 77 ~~~~~d~~~~~w~~l-~~~~~~~~~~~~~~~~s~~G-ll~~~~~~~~~~~v~NP~t~~~--~~lP~~~~~~~~~~~~~~~ 152 (372)
.+..+|...++.... ..+ . ....+.-+-+| .+++.....+.+.++|+.+++. ..++....+ ...+++.+
T Consensus 21 ~v~~~d~~~~~~~~~~~~~----~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~ 93 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLG----Y-DFVDTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS--MADVDITP 93 (331)
T ss_dssp EEEEEETTTCCEEEEEECC----C-CEEEEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC--CCCEEECT
T ss_pred eEEEEeCcccceeeeEEcc----C-CcceEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCC--ccceEECC
Confidence 456678776665432 322 1 11133345555 5665554467999999999874 222221111 11244543
Q ss_pred CCCCEEEEEEeecC-CCceEEEEECCCCCccccccCCCCccccccCCCcccEEE--CCE-EEEeeeCCcE-EEEEecCCC
Q 017381 153 TPSGYKIFMLFAKS-FPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPFS-IVRFDLENG 227 (372)
Q Consensus 153 ~~~~ykvv~~~~~~-~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~-~y~~~~~~~~-i~~yD~~~~ 227 (372)
.+. .++ +.... ....+.+||..++.-...- .... ....+.+ +|+ +|........ +..||+..+
T Consensus 94 dg~--~l~-~~~~~~~~~~i~v~d~~~~~~~~~~--~~~~-------~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 94 DDQ--FAV-TVTGLNHPFNMQSYSFLKNKFISTI--PIPY-------DAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp TSS--EEE-ECCCSSSSCEEEEEETTTTEEEEEE--ECCT-------TEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCC--EEE-EecCCCCcccEEEEECCCCCeEEEE--ECCC-------CccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 322 444 33221 2238999999877543221 1110 1122333 564 6766555445 888887642
Q ss_pred e-eeccCCCCccccccCCCcccccceeeeccCCCe-EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhh
Q 017381 228 I-WETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSV 305 (372)
Q Consensus 228 ~-w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~ 305 (372)
. ..... . ..++.+.....+... -+|+ |++... ....+.+|.++....-..+..++...
T Consensus 162 g~~~~~~-~-----~~~~~~~~~~~~~~s--pdg~~l~v~~~-----~~~~v~v~d~~~~~~~~~~~~~~~~~------- 221 (331)
T 3u4y_A 162 GVLFDTG-Q-----EFISGGTRPFNITFT--PDGNFAFVANL-----IGNSIGILETQNPENITLLNAVGTNN------- 221 (331)
T ss_dssp CCEEEEE-E-----EEECSSSSEEEEEEC--TTSSEEEEEET-----TTTEEEEEECSSTTSCEEEEEEECSS-------
T ss_pred CcEeecC-C-----ccccCCCCccceEEC--CCCCEEEEEeC-----CCCeEEEEECCCCcccceeeeccCCC-------
Confidence 1 11000 0 001111111122212 4676 666543 23578899875332222244443210
Q ss_pred ccCCCceEEEEe-eCCEEEEEeecCCeEEEEECCCCceEEC
Q 017381 306 CYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWHWL 345 (372)
Q Consensus 306 ~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~v 345 (372)
... ...+. ++..+|+.....+.|.+||+++++.+.+
T Consensus 222 ---~~~-~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~ 258 (331)
T 3u4y_A 222 ---LPG-TIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFV 258 (331)
T ss_dssp ---CCC-CEEECTTSSEEEEECSSEEEEEEEETTTTEEEEE
T ss_pred ---CCc-eEEECCCCCEEEEEEcCCCEEEEEECCCCceeee
Confidence 011 12333 4556787765556799999999988554
No 39
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.83 E-value=2.1 Score=38.36 Aligned_cols=187 Identities=12% Similarity=0.038 Sum_probs=94.3
Q ss_pred EEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCc
Q 017381 112 LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPS 191 (372)
Q Consensus 112 ll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~ 191 (372)
.+++.+..++.+.+||..+++....-... .....+++.+. .-.+++.+. ....+.+||..+++-...- ...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~d--g~~l~~~~~--~d~~i~v~d~~~~~~~~~~--~~~- 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG--SNPMGAVISPD--GTKVYVANA--HSNDVSIIDTATNNVIATV--PAG- 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS--SSEEEEEECTT--SSEEEEEEG--GGTEEEEEETTTTEEEEEE--ECS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC--CCcceEEECCC--CCEEEEECC--CCCeEEEEECCCCeEEEEE--ECC-
Confidence 34444445678999999988754322111 11223444332 224544442 2357889999877543221 111
Q ss_pred cccccCCCcccEEE--CCE-EEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe-EEEEEe
Q 017381 192 MILSQSSHQEGVFY--KGS-LYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGG 267 (372)
Q Consensus 192 ~~~~~~~~~~~v~~--~G~-~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~vv~~ 267 (372)
.....+.+ +|. +|+.+.....|..||+.+.+..... + ..... ..+... -+|+ |++.+.
T Consensus 74 ------~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~-~-------~~~~~--~~~~~s--~dg~~l~~~~~ 135 (391)
T 1l0q_A 74 ------SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV-K-------TGKSP--LGLALS--PDGKKLYVTNN 135 (391)
T ss_dssp ------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-E-------CSSSE--EEEEEC--TTSSEEEEEET
T ss_pred ------CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE-e-------CCCCc--ceEEEC--CCCCEEEEEeC
Confidence 01122333 354 5555555567999999887654321 1 11111 122212 4666 445432
Q ss_pred eecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEECCCCceEE
Q 017381 268 VGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 268 ~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
....+.+|.+.. ++......... .....++. .++.+++.....+.|.+||+++++...
T Consensus 136 -----~~~~v~~~d~~~-~~~~~~~~~~~-------------~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 136 -----GDKTVSVINTVT-KAVINTVSVGR-------------SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp -----TTTEEEEEETTT-TEEEEEEECCS-------------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -----CCCEEEEEECCC-CcEEEEEecCC-------------CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 235788887642 33222211110 01112222 345677776666789999999886544
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.50 E-value=2 Score=36.63 Aligned_cols=190 Identities=13% Similarity=0.079 Sum_probs=95.4
Q ss_pred EecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
...+|-+++.....+.+.++|+ +++...+...........+++++. . ++++... ....+.+|+. +++.....
T Consensus 106 ~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~--g-~l~v~~~--~~~~i~~~~~-~g~~~~~~- 177 (299)
T 2z2n_A 106 EGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD--N-ALWFTEN--QNNAIGRITE-SGDITEFK- 177 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT--S-CEEEEET--TTTEEEEECT-TCCEEEEE-
T ss_pred ECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC--C-CEEEEeC--CCCEEEEEcC-CCcEEEee-
Confidence 3446755555433578999999 777655432211112233444332 2 4444331 2357888888 77665442
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCccc-ccceeeeccCCCeEE
Q 017381 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELT-FFRLVNDGEESNKLY 263 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~-~~~lv~e~~~~g~L~ 263 (372)
.+. .. ....++.+ +|.+|+.......+..||+ +.++..+. ++.... ...+... -+|+|+
T Consensus 178 --~~~-~~---~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~---------~~~~~~~~~~i~~~--~~g~l~ 239 (299)
T 2z2n_A 178 --IPT-PA---SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFK---------IPTPNARPHAITAG--AGIDLW 239 (299)
T ss_dssp --CSS-TT---CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE---------CSSTTCCEEEEEEC--STTCEE
T ss_pred --CCC-CC---CcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEE---------CCCCCCCceeEEEC--CCCCEE
Confidence 111 00 11224444 4788776655567999999 66665543 222111 1233323 478888
Q ss_pred EEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCce
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
+.... ...+.+| +..+....+ .++... .......+ .++.+++... .+.+..||+++++.
T Consensus 240 v~~~~-----~~~i~~~--d~~g~~~~~-~~~~~~----------~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~~ 298 (299)
T 2z2n_A 240 FTEWG-----ANKIGRL--TSNNIIEEY-PIQIKS----------AEPHGICF-DGETIWFAME-CDKIGKLTLIKDNM 298 (299)
T ss_dssp EEETT-----TTEEEEE--ETTTEEEEE-ECSSSS----------CCEEEEEE-CSSCEEEEET-TTEEEEEEEC----
T ss_pred EeccC-----CceEEEE--CCCCceEEE-eCCCCC----------CccceEEe-cCCCEEEEec-CCcEEEEEcCcccC
Confidence 87531 2344444 443433322 122110 00111233 6677888764 57899999988754
No 41
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.98 E-value=2.6 Score=42.19 Aligned_cols=187 Identities=10% Similarity=0.147 Sum_probs=94.4
Q ss_pred CceEEEEeccccceeccCCCCCC-CCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCC
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYP-FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~-~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (372)
++.+.|||..++++..+...... .....+.+.+..+. +.++.++ .+..+.+||..++.|.... .... ...
T Consensus 30 dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s--~Dg~I~vwd~~~~~~~~~~--~~~~----h~~ 100 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCS--YDGKVLIWKEENGRWSQIA--VHAV----HSA 100 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEE--TTSCEEEEEEETTEEEEEE--EECC----CSS
T ss_pred CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCC-CEEEEEe--CCCeEEEEECCCCcccccc--cccC----CCC
Confidence 46788888875554443322211 11223344332112 2333333 2357889999988876655 2211 111
Q ss_pred CcccEEEC----CEEEEeeeCCcEEEEEecCCCeeecc-CCCCccccccCCCcccccceeee-----------ccCCCeE
Q 017381 199 HQEGVFYK----GSLYFTTPEPFSIVRFDLENGIWETP-NDANDHMTMMLPHELTFFRLVND-----------GEESNKL 262 (372)
Q Consensus 199 ~~~~v~~~----G~~y~~~~~~~~i~~yD~~~~~w~~i-~~p~~~~~~~~p~~~~~~~lv~e-----------~~~~g~L 262 (372)
.-..+.+. |...+.++....|..||+.+..-... ...+ .+.... .+... +..+|.+
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~------~~~~v~--~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDA------HAIGVN--SASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEEC------CSSCEE--EEEECCCC---------CGGGCC
T ss_pred CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeec------CCCceE--EEEecCcccccccccccCCCCCE
Confidence 12233332 66666666666799999876522111 0000 111111 11100 0014666
Q ss_pred EEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEE--eeC---CEEEEEeecCCeEEEEE
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQ---GMICVCCYTWPEILYYN 336 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~---~~i~~~~~~~~~v~~yd 336 (372)
++++.. ...+.+|.+..... +..+..+... ...+.++ ..+ +..++.+...+.|.+||
T Consensus 173 l~sgs~-----dg~I~iwd~~~~~~~~~~~~~~~~h------------~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 173 FVTGGA-----DNLVKIWKYNSDAQTYVLESTLEGH------------SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp EEEEET-----TSCEEEEEEETTTTEEEEEEEECCC------------SSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred EEEEEC-----CCeEEEEeccCCcccceeeeeecCC------------CCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 666552 35799999976554 7766555311 1223333 223 55666665667899999
Q ss_pred CCCC
Q 017381 337 VARR 340 (372)
Q Consensus 337 ~~~~ 340 (372)
+.++
T Consensus 236 ~~~~ 239 (753)
T 3jro_A 236 QDNE 239 (753)
T ss_dssp ESSS
T ss_pred CCCC
Confidence 9986
No 42
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=93.92 E-value=2.7 Score=35.85 Aligned_cols=195 Identities=14% Similarity=0.099 Sum_probs=101.3
Q ss_pred EEecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
....+|-+++.....+.+.++|+. ++...++..........++++.. . ++++... ....+.+||.. ++++...
T Consensus 26 ~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~--g-~l~v~~~--~~~~v~~~d~~-g~~~~~~ 98 (300)
T 2qc5_A 26 TSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSL--G-DIWFTEN--GANKIGKLSKK-GGFTEYP 98 (300)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT--S-CEEEEET--TTTEEEEECTT-SCEEEEE
T ss_pred eECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCC--C-CEEEEec--CCCeEEEECCC-CCeEEec
Confidence 334566555554345789999998 77665443211112223344322 2 3444331 23578889887 6665443
Q ss_pred cCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcc-cccceeeeccCCCeE
Q 017381 186 IDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHEL-TFFRLVNDGEESNKL 262 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~-~~~~lv~e~~~~g~L 262 (372)
.+. .. ....++.+ +|.+|+.......+..||+. .+..... +|... ....+... -+|+|
T Consensus 99 ---~~~-~~---~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~---------~~~~~~~~~~i~~d--~~g~l 159 (300)
T 2qc5_A 99 ---LPQ-PD---SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYD---------LPNKGSYPAFITLG--SDNAL 159 (300)
T ss_dssp ---CSS-TT---CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEE---------CSSTTCCEEEEEEC--TTSSE
T ss_pred ---CCC-CC---CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEcc---------CCCCCCCceeEEEC--CCCCE
Confidence 121 00 11223444 58888766555679999987 5554432 22111 11233323 57888
Q ss_pred EEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCce
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
++.... .. .|+.++..++...+ .++... ....-.++..++.+|+.....+.|..||+ ++++
T Consensus 160 ~v~~~~-----~~--~i~~~~~~g~~~~~-~~~~~~----------~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~ 220 (300)
T 2qc5_A 160 WFTENQ-----NN--SIGRITNTGKLEEY-PLPTNA----------AAPVGITSGNDGALWFVEIMGNKIGRITT-TGEI 220 (300)
T ss_dssp EEEETT-----TT--EEEEECTTCCEEEE-ECSSTT----------CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred EEEecC-----CC--eEEEECCCCcEEEe-eCCCCC----------CCcceEEECCCCCEEEEccCCCEEEEEcC-CCcE
Confidence 887531 12 46666665555543 222110 00111223335678888765667999998 6666
Q ss_pred EEC
Q 017381 343 HWL 345 (372)
Q Consensus 343 ~~v 345 (372)
...
T Consensus 221 ~~~ 223 (300)
T 2qc5_A 221 SEY 223 (300)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 43
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=93.82 E-value=2.5 Score=35.80 Aligned_cols=138 Identities=17% Similarity=0.087 Sum_probs=79.4
Q ss_pred CccccccCCCCCee-eecCCCCCCCCCceEEEEecCcEEEEecCCCceEEEEeccccce-eccCCCCCCCCceeEEEEeC
Q 017381 76 DQYPLYDSTHGTWR-RLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVST 153 (372)
Q Consensus 76 ~~~~~~d~~~~~w~-~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~~-~~lP~~~~~~~~~~~~~~~~ 153 (372)
..+..+|+..++-. .++++. .....-++..++-|+......+.++|+|+.|.+. .++|... .+.|+...
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~----~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-----~Gwglt~d 113 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPP----PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-----EGWALTSD 113 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCT----TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSS-----CCCEEEEC
T ss_pred ceEEEEECCCCCEEEEEeCCC----CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-----CceEEeeC
Confidence 34566788776543 345442 1111223444666666666678999999998774 4555332 23455543
Q ss_pred CCCEEEEEEeecCCCceEEEEECCCCCcc-ccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCeee
Q 017381 154 PSGYKIFMLFAKSFPNYAFVYDSTDQSWS-KFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWE 230 (372)
Q Consensus 154 ~~~ykvv~~~~~~~~~~~~vy~s~~~~W~-~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w~ 230 (372)
+ .++++..+ ...+.++|+++.+=. .+. +.....+........+.+|.+|.-......|.+.|+++.+-.
T Consensus 114 g--~~L~vSdg---s~~l~~iDp~t~~~~~~I~---V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~ 183 (243)
T 3mbr_X 114 D--SHLYMSDG---TAVIRKLDPDTLQQVGSIK---VTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVV 183 (243)
T ss_dssp S--SCEEEECS---SSEEEEECTTTCCEEEEEE---CEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEE
T ss_pred C--CEEEEECC---CCeEEEEeCCCCeEEEEEE---EccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEE
Confidence 3 25665442 467899999986532 221 110001101112234569999977777778999999987653
No 44
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.63 E-value=1.5 Score=38.63 Aligned_cols=152 Identities=13% Similarity=0.093 Sum_probs=77.1
Q ss_pred eEEEEECCCCCccccccCCCCccccccCCCcccEEE--CCEEEEeeeC--CcEEEEEecCCCeeeccCCCCccccccCCC
Q 017381 170 YAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPE--PFSIVRFDLENGIWETPNDANDHMTMMLPH 245 (372)
Q Consensus 170 ~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~--~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~ 245 (372)
.++.+|..+++++... .... . .....+.+ +|++|..... ...|..||+.+.+.+.+... ...
T Consensus 19 ~v~~~d~~tg~~~~~~--~~~~--~---~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~-------~~~ 84 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDG--LLAA--T---QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTV-------VAP 84 (347)
T ss_dssp EEEEEETTTTEEEEEE--EEEE--C---SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEE-------EEE
T ss_pred EEEEEcCCCCeEEEee--eeec--c---CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeee-------ecC
Confidence 4556677778776644 1111 0 11122333 6888877653 35799999987776554310 001
Q ss_pred cccccceeeeccCCCe-EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceE--EEEeeCCEE
Q 017381 246 ELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHV--YCFWHQGMI 322 (372)
Q Consensus 246 ~~~~~~lv~e~~~~g~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~--~~~~~~~~i 322 (372)
......+... -+|+ |++... ....+.+|.++.++....+..++..-..-..+ .....+ ..+..++.+
T Consensus 85 ~~~p~~~a~s--pdg~~l~~~~~-----~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~spdg~l 154 (347)
T 3hfq_A 85 GTPPAYVAVD--EARQLVYSANY-----HKGTAEVMKIAADGALTLTDTVQHSGHGPRPE---QDGSHIHYTDLTPDNRL 154 (347)
T ss_dssp SCCCSEEEEE--TTTTEEEEEET-----TTTEEEEEEECTTSCEEEEEEEECCCCCSSTT---CSSCCEEEEEECTTSCE
T ss_pred CCCCEEEEEC--CCCCEEEEEeC-----CCCEEEEEEeCCCCCeeecceeecCCCCCCcc---ccCCCceEEEECCCCcE
Confidence 1111122212 5676 554432 23578999997666655554432110000000 000112 233334447
Q ss_pred EEEeecCCeEEEEECC-CCceEEC
Q 017381 323 CVCCYTWPEILYYNVA-RRTWHWL 345 (372)
Q Consensus 323 ~~~~~~~~~v~~yd~~-~~~w~~v 345 (372)
|+.....+.|.+||+. +++...+
T Consensus 155 ~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 155 AVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEE
T ss_pred EEEeCCCCEEEEEEECCCCcEEEe
Confidence 7777666789999998 6666543
No 45
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=93.28 E-value=4.3 Score=36.27 Aligned_cols=186 Identities=11% Similarity=0.085 Sum_probs=96.3
Q ss_pred EEecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC--ccc
Q 017381 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS--WSK 183 (372)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~--W~~ 183 (372)
....+|.+++... .+.++.+|+.|++...--....... ....... . +|++.. ....+..||..+++ |+.
T Consensus 99 ~~~~~~~v~v~~~-~g~l~a~d~~tG~~~W~~~~~~~~~-~~p~~~~---~-~v~v~~---~~g~l~~~d~~tG~~~W~~ 169 (376)
T 3q7m_A 99 VTVSGGHVYIGSE-KAQVYALNTSDGTVAWQTKVAGEAL-SRPVVSD---G-LVLIHT---SNGQLQALNEADGAVKWTV 169 (376)
T ss_dssp EEEETTEEEEEET-TSEEEEEETTTCCEEEEEECSSCCC-SCCEEET---T-EEEEEC---TTSEEEEEETTTCCEEEEE
T ss_pred ceEeCCEEEEEcC-CCEEEEEECCCCCEEEEEeCCCceE-cCCEEEC---C-EEEEEc---CCCeEEEEECCCCcEEEEE
Confidence 4456777666543 4789999999998432111111111 0111111 1 444432 23478899988775 876
Q ss_pred cccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCC--eeeccCCCCccccccCCCc---------ccccce
Q 017381 184 FDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTMMLPHE---------LTFFRL 252 (372)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~--~w~~i~~p~~~~~~~~p~~---------~~~~~l 252 (372)
.. .-+. ........++..+|.+|+-. ....+.+||..+. .|+.-. + .|.+ .....+
T Consensus 170 ~~--~~~~--~~~~~~~~~~~~~~~v~~g~-~~g~l~~~d~~tG~~~w~~~~-~-------~~~~~~~~~~~~~~~~~p~ 236 (376)
T 3q7m_A 170 NL--DMPS--LSLRGESAPTTAFGAAVVGG-DNGRVSAVLMEQGQMIWQQRI-S-------QATGSTEIDRLSDVDTTPV 236 (376)
T ss_dssp EC--CC-------CCCCCCEEETTEEEECC-TTTEEEEEETTTCCEEEEEEC-C-------C-----------CCCCCCE
T ss_pred eC--CCCc--eeecCCCCcEEECCEEEEEc-CCCEEEEEECCCCcEEEEEec-c-------cCCCCcccccccccCCCcE
Confidence 54 2221 11112244667788887643 3346999998755 455421 1 1211 112223
Q ss_pred eeeccCCCeEEEEEeeecCCccceEEEEEEcCCCC--EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCC
Q 017381 253 VNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWP 330 (372)
Q Consensus 253 v~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 330 (372)
+ .+|.+++... ...+..+... .++ |..- .+ .....+..++.||+... .+
T Consensus 237 ~----~~~~v~~~~~------~g~l~~~d~~-tG~~~w~~~--~~---------------~~~~~~~~~~~l~~~~~-~g 287 (376)
T 3q7m_A 237 V----VNGVVFALAY------NGNLTALDLR-SGQIMWKRE--LG---------------SVNDFIVDGNRIYLVDQ-ND 287 (376)
T ss_dssp E----ETTEEEEECT------TSCEEEEETT-TCCEEEEEC--CC---------------CEEEEEEETTEEEEEET-TC
T ss_pred E----ECCEEEEEec------CcEEEEEECC-CCcEEeecc--CC---------------CCCCceEECCEEEEEcC-CC
Confidence 3 5788877643 1233344332 233 8642 11 01123345788888763 46
Q ss_pred eEEEEECCCCce
Q 017381 331 EILYYNVARRTW 342 (372)
Q Consensus 331 ~v~~yd~~~~~w 342 (372)
.+.++|.++++-
T Consensus 288 ~l~~~d~~tG~~ 299 (376)
T 3q7m_A 288 RVMALTIDGGVT 299 (376)
T ss_dssp CEEEEETTTCCE
T ss_pred eEEEEECCCCcE
Confidence 899999999863
No 46
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=92.77 E-value=2 Score=36.83 Aligned_cols=137 Identities=15% Similarity=0.051 Sum_probs=77.5
Q ss_pred ccccccCCCCCee-eecCCCCCCCCCceEEEEecCcEEEEecCCCceEEEEeccccce-eccCCCCCCCCceeEEEEeCC
Q 017381 77 QYPLYDSTHGTWR-RLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVSTP 154 (372)
Q Consensus 77 ~~~~~d~~~~~w~-~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~~-~~lP~~~~~~~~~~~~~~~~~ 154 (372)
.+..+|+..++-. .++++. .....-++..++-|+......+.++|+|+.|.+. .++|... .+.|+...+
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~----~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-----eG~glt~dg 136 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGK----RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-----EGWGLTHND 136 (262)
T ss_dssp EEEEECTTTCCEEEEEECCT----TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-----CCCCEEECS
T ss_pred eEEEEECCCCcEEEEEecCC----ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-----CceEEecCC
Confidence 3556777766533 444431 1111223445666666666678999999999884 4555322 233444332
Q ss_pred CCEEEEEEeecCCCceEEEEECCCCCcc-ccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCeee
Q 017381 155 SGYKIFMLFAKSFPNYAFVYDSTDQSWS-KFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWE 230 (372)
Q Consensus 155 ~~ykvv~~~~~~~~~~~~vy~s~~~~W~-~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w~ 230 (372)
.+++...+ ...+.++|+++.+=. .+. +.....+...-....+.+|.+|.-......|...|+++.+-.
T Consensus 137 --~~L~~SdG---s~~i~~iDp~T~~v~~~I~---V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~ 205 (262)
T 3nol_A 137 --QYLIMSDG---TPVLRFLDPESLTPVRTIT---VTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVT 205 (262)
T ss_dssp --SCEEECCS---SSEEEEECTTTCSEEEEEE---CEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEE
T ss_pred --CEEEEECC---CCeEEEEcCCCCeEEEEEE---eccCCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEE
Confidence 24555432 467899999986532 222 111000100111234669999987777778999999987653
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.62 E-value=4.3 Score=34.51 Aligned_cols=149 Identities=10% Similarity=0.083 Sum_probs=77.3
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
..+|-+++.....+.+.++|+..+....+...........+++++. . ++++... ....+.+|+.....-....
T Consensus 129 ~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~--g-~l~v~~~--~~~~i~~~~~~g~~~~~~~-- 201 (286)
T 1q7f_A 129 DNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK--Q-EIFISDN--RAHCVKVFNYEGQYLRQIG-- 201 (286)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSS--S-EEEEEEG--GGTEEEEEETTCCEEEEES--
T ss_pred eCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCC--C-CEEEEEC--CCCEEEEEcCCCCEEEEEc--
Confidence 4466555554445789999986555444432111111234455432 2 4555432 2357889998554322222
Q ss_pred CCCccccccCCCcccEEE--CCEEEEeeeCCc-EEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEE
Q 017381 188 GFPSMILSQSSHQEGVFY--KGSLYFTTPEPF-SIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYL 264 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~-~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~v 264 (372)
. .. .+ ....++.+ +|.+|+...... .|..||...+....+... .+.. ....+... -+|+|++
T Consensus 202 ~-~g-~~---~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~-------~~~~-~~~~i~~~--~~g~l~v 266 (286)
T 1q7f_A 202 G-EG-IT---NYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESK-------VKHA-QCFDVALM--DDGSVVL 266 (286)
T ss_dssp C-TT-TS---CSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEES-------SCCS-CEEEEEEE--TTTEEEE
T ss_pred c-CC-cc---CCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEccc-------CCCC-cceeEEEC--CCCcEEE
Confidence 0 00 00 11234555 578887766554 799999765544443211 1111 11123223 5899888
Q ss_pred EEeeecCCccceEEEEEEcC
Q 017381 265 IGGVGRNGISTTMKLWELGC 284 (372)
Q Consensus 265 v~~~~~~~~~~~i~vw~l~~ 284 (372)
... ..++.||++..
T Consensus 267 s~~------~~~v~v~~~~~ 280 (286)
T 1q7f_A 267 ASK------DYRLYIYRYVQ 280 (286)
T ss_dssp EET------TTEEEEEECSC
T ss_pred ECC------CCeEEEEEccc
Confidence 742 25789998753
No 48
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.31 E-value=5 Score=34.49 Aligned_cols=148 Identities=16% Similarity=0.002 Sum_probs=81.0
Q ss_pred EEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccEE-ECCEEEEeeeCCcEEEEEecCCCeee-ccCCC
Q 017381 158 KIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVF-YKGSLYFTTPEPFSIVRFDLENGIWE-TPNDA 235 (372)
Q Consensus 158 kvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~-~~G~~y~~~~~~~~i~~yD~~~~~w~-~i~~p 235 (372)
.++...+.. ..+.++|.++++=...- ++. .....++. .++.+|.++.....+.+||.++.+-. .+.
T Consensus 66 ~Ly~stG~~--g~v~~iD~~Tgkv~~~~---l~~-----~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~-- 133 (268)
T 3nok_A 66 HFFESTGHQ--GTLRQLSLESAQPVWME---RLG-----NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR-- 133 (268)
T ss_dssp EEEEEETTT--TEEEECCSSCSSCSEEE---ECT-----TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE--
T ss_pred EEEEEcCCC--CEEEEEECCCCcEEeEE---CCC-----CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe--
Confidence 566555432 23889999887421110 111 12223444 45799999888888999999876543 332
Q ss_pred CccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEE
Q 017381 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC 315 (372)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~ 315 (372)
.+ .....+.. -+++|++..+ .. .|+.+|..+. ..+.+++... .+..+.....+.+
T Consensus 134 -------~~--~eGwGLt~---Dg~~L~vSdG------s~--~l~~iDp~T~-~v~~~I~V~~----~g~~v~~lNeLe~ 188 (268)
T 3nok_A 134 -------YS--GEGWGLCY---WNGKLVRSDG------GT--MLTFHEPDGF-ALVGAVQVKL----RGQPVELINELEC 188 (268)
T ss_dssp -------CS--SCCCCEEE---ETTEEEEECS------SS--EEEEECTTTC-CEEEEEECEE----TTEECCCEEEEEE
T ss_pred -------CC--CceeEEec---CCCEEEEECC------CC--EEEEEcCCCC-eEEEEEEeCC----CCcccccccccEE
Confidence 22 12234542 4667887764 12 4666675542 2222222110 0000001122232
Q ss_pred EeeCCEEEEEeecCCeEEEEECCCCceEE
Q 017381 316 FWHQGMICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 316 ~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
.++.||+.....+.|.+-|+++++-..
T Consensus 189 --~dG~lyanvw~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 189 --ANGVIYANIWHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp --ETTEEEEEETTCSEEEEECTTTCBEEE
T ss_pred --eCCEEEEEECCCCeEEEEeCCCCcEEE
Confidence 367899887777899999999996543
No 49
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.74 E-value=5.9 Score=34.15 Aligned_cols=194 Identities=11% Similarity=0.069 Sum_probs=98.9
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
..+|-+++.....+.++.+||.+++...+... .....+++++.+. +++.. ...+.+||..+++++.+.
T Consensus 22 ~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~---~~~~~i~~~~dG~---l~v~~----~~~l~~~d~~~g~~~~~~-- 89 (297)
T 3g4e_A 22 EVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMD---APVSSVALRQSGG---YVATI----GTKFCALNWKEQSAVVLA-- 89 (297)
T ss_dssp TTTTEEEEEETTTTEEEEEETTTCCEEEEECS---SCEEEEEEBTTSS---EEEEE----TTEEEEEETTTTEEEEEE--
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEeCC---CceEEEEECCCCC---EEEEE----CCeEEEEECCCCcEEEEE--
Confidence 33454445444457899999998876544321 1223445544332 33332 257899999998887665
Q ss_pred CCCccccccCCCcccEEE--CCEEEEeeeC-----------CcEEEEEecCCCeeeccCCCCccccccCCCcccccceee
Q 017381 188 GFPSMILSQSSHQEGVFY--KGSLYFTTPE-----------PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVN 254 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~G~~y~~~~~-----------~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~ 254 (372)
..+. ..+. .....+.+ +|.+|+-+.. ...+..+|... +...+.... -.|. .+..
T Consensus 90 ~~~~-~~~~-~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~-----~~pn-----gi~~ 156 (297)
T 3g4e_A 90 TVDN-DKKN-NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQV-----DISN-----GLDW 156 (297)
T ss_dssp ECCT-TCSS-EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEE-----SBEE-----EEEE
T ss_pred ecCC-CCCC-CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecc-----cccc-----ceEE
Confidence 2211 0010 11123333 5887765421 13577777653 222221000 0122 2221
Q ss_pred eccCCCe-EEEEEeeecCCccceEEEEEEc-CCCCEEE---EEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecC
Q 017381 255 DGEESNK-LYLIGGVGRNGISTTMKLWELG-CGGNWIE---VERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTW 329 (372)
Q Consensus 255 e~~~~g~-L~vv~~~~~~~~~~~i~vw~l~-~~~~W~~---v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 329 (372)
. -+|+ ||++.. ....|.+|.++ ..+.... +..++... ....-.++..++.+++.....
T Consensus 157 s--pdg~~lyv~~~-----~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~----------~~p~g~~~d~~G~lwva~~~~ 219 (297)
T 3g4e_A 157 S--LDHKIFYYIDS-----LSYSVDAFDYDLQTGQISNRRSVYKLEKEE----------QIPDGMCIDAEGKLWVACYNG 219 (297)
T ss_dssp C--TTSCEEEEEEG-----GGTEEEEEEECTTTCCEEEEEEEEECCGGG----------CEEEEEEEBTTSCEEEEEETT
T ss_pred c--CCCCEEEEecC-----CCCcEEEEeccCCCCcccCcEEEEECCCCC----------CCCCeeEECCCCCEEEEEcCC
Confidence 1 3565 666653 23567777775 3444322 22232110 001122344456789988766
Q ss_pred CeEEEEECCCCceE
Q 017381 330 PEILYYNVARRTWH 343 (372)
Q Consensus 330 ~~v~~yd~~~~~w~ 343 (372)
+.|..||+++++..
T Consensus 220 ~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 220 GRVIRLDPVTGKRL 233 (297)
T ss_dssp TEEEEECTTTCCEE
T ss_pred CEEEEEcCCCceEE
Confidence 78999999987654
No 50
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=91.54 E-value=6.3 Score=34.08 Aligned_cols=205 Identities=13% Similarity=0.085 Sum_probs=96.1
Q ss_pred ecCc-EEEEecCCCceEEEEecc--ccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC-ccc
Q 017381 108 SSKG-LLCFSLPSSSSFLVCNLV--TLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSK 183 (372)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~--t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~-W~~ 183 (372)
+-+| .++......+.+.+|+.. +++...+...+.......+++.+.+. .+++... ....+.+|+..++. .+.
T Consensus 46 spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~--~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 46 SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQ--FVFVGSY--NAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSS--EEEEEET--TTTEEEEEEEETTEEEEE
T ss_pred CCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCC--EEEEEec--CCCeEEEEECCCCccccc
Confidence 4444 455544334678887765 66765443322111223444443322 3444332 23567888874322 222
Q ss_pred cccCCCCccccccCCCcccEEE--CC-EEEEeeeCCcEEEEEecCC-CeeeccC---CCCccccccCCCcccccceeeec
Q 017381 184 FDIDGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLEN-GIWETPN---DANDHMTMMLPHELTFFRLVNDG 256 (372)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G-~~y~~~~~~~~i~~yD~~~-~~w~~i~---~p~~~~~~~~p~~~~~~~lv~e~ 256 (372)
.. ..+. ......+.+ +| .+|........+..||+.+ .+...+. .. .+.+.....+...
T Consensus 122 ~~--~~~~-----~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~- 186 (343)
T 1ri6_A 122 VD--VVEG-----LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVT-------TVEGAGPRHMVFH- 186 (343)
T ss_dssp EE--EECC-----CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEE-------CSTTCCEEEEEEC-
T ss_pred cc--cccC-----CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccc-------cCCCCCcceEEEC-
Confidence 22 1111 011112222 45 4555443445799999886 5554211 01 2221111122212
Q ss_pred cCCCe-EEEEEeeecCCccceEEEEEEcCC-CCEEEE---EecChHHHHHhhhhccCCCceE--EEEe-eCCEEEEEeec
Q 017381 257 EESNK-LYLIGGVGRNGISTTMKLWELGCG-GNWIEV---ERVPEMMCRKFMSVCYHNYDHV--YCFW-HQGMICVCCYT 328 (372)
Q Consensus 257 ~~~g~-L~vv~~~~~~~~~~~i~vw~l~~~-~~W~~v---~~lp~~~~~~~~~~~~~~~~~~--~~~~-~~~~i~~~~~~ 328 (372)
-+|+ |++.+. ....+.+|.++.. +.++.. ..++... ...... .++. .+..+|+....
T Consensus 187 -pdg~~l~~~~~-----~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~---------~~~~~~~~i~~s~dg~~l~v~~~~ 251 (343)
T 1ri6_A 187 -PNEQYAYCVNE-----LNSSVDVWELKDPHGNIECVQTLDMMPENF---------SDTRWAADIHITPDGRHLYACDRT 251 (343)
T ss_dssp -TTSSEEEEEET-----TTTEEEEEESSCTTSCCEEEEEEECSCTTC---------CSCCCEEEEEECTTSSEEEEEETT
T ss_pred -CCCCEEEEEeC-----CCCEEEEEEecCCCCcEEEEeeccccCccc---------cccCCccceEECCCCCEEEEEecC
Confidence 4666 555542 2357899998643 334433 2333210 001111 2232 34567776655
Q ss_pred CCeEEEEECC--CCceEECC
Q 017381 329 WPEILYYNVA--RRTWHWLP 346 (372)
Q Consensus 329 ~~~v~~yd~~--~~~w~~v~ 346 (372)
.+.+.+||++ +++++.+.
T Consensus 252 ~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 252 ASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp TTEEEEEEECTTSCCEEEEE
T ss_pred CCEEEEEEEcCCCCceEEee
Confidence 6789999998 55666554
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.36 E-value=6.4 Score=34.57 Aligned_cols=196 Identities=6% Similarity=0.005 Sum_probs=92.4
Q ss_pred CCceEEEEeccccceeccCCCCC-CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccC
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~-~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (372)
.++.+.+||..++++..+..... ......+.+.+.... +.++.++ ....+.+||..++.-.... .+.. ..
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~--~d~~i~v~d~~~~~~~~~~--~~~~----~~ 147 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVAS--SDGKVSVVEFKENGTTSPI--IIDA----HA 147 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEE--TTSEEEEEECCTTSCCCEE--EEEC----CT
T ss_pred cCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC-CEEEEec--CCCcEEEEecCCCCceeeE--EecC----CC
Confidence 45789999999987554433321 112223444332102 2333332 2357889998876322111 0000 00
Q ss_pred CCcccEEE---------------CCEEEEeeeCCcEEEEEecCCCe--eeccCCCCccccccCCC-cccccceeeeccCC
Q 017381 198 SHQEGVFY---------------KGSLYFTTPEPFSIVRFDLENGI--WETPNDANDHMTMMLPH-ELTFFRLVNDGEES 259 (372)
Q Consensus 198 ~~~~~v~~---------------~G~~y~~~~~~~~i~~yD~~~~~--w~~i~~p~~~~~~~~p~-~~~~~~lv~e~~~~ 259 (372)
.....+.. +|...+.+.....|..||+.+.. +..+. . +.. ......+... -+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~-------~~~h~~~v~~~~~s--p~ 217 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES-T-------LEGHSDWVRDVAWS--PT 217 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE-E-------ECCCSSCEEEEEEC--CC
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE-E-------EecccCcEeEEEEC--CC
Confidence 01111111 46666666655678899986542 33221 0 111 1111122211 34
Q ss_pred ---CeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEE--EeeCCEEEEEeecCCeEE
Q 017381 260 ---NKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEIL 333 (372)
Q Consensus 260 ---g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~ 333 (372)
|++++.+.. ...+.+|.++.... +....... . .....+.+ +..++..++.....+.|.
T Consensus 218 ~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~-~----------~~~~~v~~~~~s~~g~~l~~~~~dg~i~ 281 (379)
T 3jrp_A 218 VLLRSYLASVSQ-----DRTCIIWTQDNEQGPWKKTLLKE-E----------KFPDVLWRASWSLSGNVLALSGGDNKVT 281 (379)
T ss_dssp CSSSEEEEEEET-----TSCEEEEEESSTTSCCEEEESSS-S----------CCSSCEEEEEECSSSCCEEEEESSSSEE
T ss_pred CCCCCeEEEEeC-----CCEEEEEeCCCCCccceeeeecc-c----------cCCCcEEEEEEcCCCCEEEEecCCCcEE
Confidence 677766652 35789999975543 33221110 0 00112222 223333344443467799
Q ss_pred EEECC-CCceEECCCCC
Q 017381 334 YYNVA-RRTWHWLPSCP 349 (372)
Q Consensus 334 ~yd~~-~~~w~~v~~~~ 349 (372)
+||+. .++|..+....
T Consensus 282 iw~~~~~~~~~~~~~~~ 298 (379)
T 3jrp_A 282 LWKENLEGKWEPAGEVH 298 (379)
T ss_dssp EEEEEETTEEEEEEEEC
T ss_pred EEeCCCCCcccccccee
Confidence 99998 46777655433
No 52
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=91.19 E-value=6.7 Score=33.70 Aligned_cols=138 Identities=10% Similarity=-0.014 Sum_probs=76.9
Q ss_pred CccccccCCCCCee-eecCCCCCCCCCceEEEEecCcEEEEecCCCceEEEEeccccce-eccCCCCCCCCceeEEEEeC
Q 017381 76 DQYPLYDSTHGTWR-RLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVST 153 (372)
Q Consensus 76 ~~~~~~d~~~~~w~-~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~~-~~lP~~~~~~~~~~~~~~~~ 153 (372)
..+..+|+..++-. .++++. .....-++-.++.++......+.+.|+|+.|.+. ..+|.. .+ .+.|+...
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~----~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~---~g~glt~D 115 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDD----SYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MK---DGWGLATD 115 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCT----TCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECC-SS---SCCEEEEC
T ss_pred CEEEEEECCCCCEEEEEecCC----CcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECC-CC---CeEEEEEC
Confidence 44566787766543 344431 1111123334667777776678999999999773 445432 11 23444433
Q ss_pred CCCEEEEEEeecCCCceEEEEECCCCCcc-ccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCee
Q 017381 154 PSGYKIFMLFAKSFPNYAFVYDSTDQSWS-KFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 154 ~~~ykvv~~~~~~~~~~~~vy~s~~~~W~-~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
+. ++++.. ....+.++|+++.+=. .+. +.....+........+.+|.+|.-......|.+.|+++.+-
T Consensus 116 g~--~l~vs~---gs~~l~viD~~t~~v~~~I~---Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 116 GK--ILYGSD---GTSILYEIDPHTFKLIKKHN---VKYNGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp SS--SEEEEC---SSSEEEEECTTTCCEEEEEE---CEETTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCE
T ss_pred CC--EEEEEC---CCCeEEEEECCCCcEEEEEE---ECCCCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcE
Confidence 32 455543 2568899999875421 111 11000010011223456899997776667899999998765
No 53
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.11 E-value=3.4 Score=35.57 Aligned_cols=144 Identities=10% Similarity=0.056 Sum_probs=72.8
Q ss_pred EEEEEeecCCCceEEEEECCCCC--ccccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCC-CeeeccCC
Q 017381 158 KIFMLFAKSFPNYAFVYDSTDQS--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLEN-GIWETPND 234 (372)
Q Consensus 158 kvv~~~~~~~~~~~~vy~s~~~~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~-~~w~~i~~ 234 (372)
++++.+. ....+.++|.++++ |+... .-.. ......+.-+|.+++ +. ...+..||+.- ..|+. .
T Consensus 6 ~~lv~~~--~~~~v~~~d~~tG~~~w~~~~--~~~~-----~~~~~~~~pdG~ilv-s~-~~~V~~~d~~G~~~W~~-~- 72 (276)
T 3no2_A 6 HLLVGGS--GWNKIAIINKDTKEIVWEYPL--EKGW-----ECNSVAATKAGEILF-SY-SKGAKMITRDGRELWNI-A- 72 (276)
T ss_dssp EEEEECT--TCSEEEEEETTTTEEEEEEEC--CTTC-----CCCEEEECTTSCEEE-EC-BSEEEEECTTSCEEEEE-E-
T ss_pred cEEEeeC--CCCEEEEEECCCCeEEEEeCC--CccC-----CCcCeEECCCCCEEE-eC-CCCEEEECCCCCEEEEE-c-
Confidence 5665543 34678899987775 76654 1100 011112223788777 33 34699999842 24553 2
Q ss_pred CCccccccCCC--cccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCC--EEEEEecChHHHHHhhhhccCCC
Q 017381 235 ANDHMTMMLPH--ELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNY 310 (372)
Q Consensus 235 p~~~~~~~~p~--~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~--W~~v~~lp~~~~~~~~~~~~~~~ 310 (372)
.+. .......+ .+|++++.... ..-.|+.++.+++ |+... ......... ..
T Consensus 73 --------~~~~~~~~~~~~~----~dG~~lv~~~~------~~~~v~~vd~~Gk~l~~~~~--~~~~~~~~~-----~~ 127 (276)
T 3no2_A 73 --------APAGCEMQTARIL----PDGNALVAWCG------HPSTILEVNMKGEVLSKTEF--ETGIERPHA-----QF 127 (276)
T ss_dssp --------CCTTCEEEEEEEC----TTSCEEEEEES------TTEEEEEECTTSCEEEEEEE--CCSCSSGGG-----SC
T ss_pred --------CCCCccccccEEC----CCCCEEEEecC------CCCEEEEEeCCCCEEEEEec--cCCCCcccc-----cc
Confidence 221 11112222 58888877541 1336788887776 65432 111000000 01
Q ss_pred ceEEEEeeCCEEEEEeecCCeEEEEECCCCc
Q 017381 311 DHVYCFWHQGMICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 311 ~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (372)
..+ .+..++.+++.....+.|.+||.+ ++
T Consensus 128 ~~v-~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 128 RQI-NKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp SCC-EECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred cCc-eECCCCCEEEEecCCCEEEEECCC-CC
Confidence 112 222334455555556789999998 53
No 54
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=91.07 E-value=4.8 Score=35.62 Aligned_cols=194 Identities=8% Similarity=-0.057 Sum_probs=91.6
Q ss_pred EEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecC-CCceEEEEE--CCCCCccccccCCCCccccccCCC
Q 017381 123 FLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS-FPNYAFVYD--STDQSWSKFDIDGFPSMILSQSSH 199 (372)
Q Consensus 123 ~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~-~~~~~~vy~--s~~~~W~~~~~~~~p~~~~~~~~~ 199 (372)
++.+|+.+++...+... .......+++.+.+ -.+++..... ....+.+|+ ..+++.+.+. ..+. ....
T Consensus 31 ~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg--~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~--~~~~----~~~~ 101 (361)
T 3scy_A 31 TFRFNEETGESLPLSDA-EVANPSYLIPSADG--KFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN--TQKT----MGAD 101 (361)
T ss_dssp EEEEETTTCCEEEEEEE-ECSCCCSEEECTTS--SEEEEEECCSSTTCEEEEEEEETTTTEEEEEE--EEEC----SSSC
T ss_pred EEEEeCCCCCEEEeecc-cCCCCceEEECCCC--CEEEEEEccCCCCCcEEEEEEeCCCCcEEEee--Eecc----CCCC
Confidence 44467888887665543 11112234554332 2455544321 234565654 4446666554 2221 0011
Q ss_pred cccEEECCE-EEEeeeCCcEEEEEecCCC-eeeccC----CCCccccccCCCc--ccc-cceeeeccCCCe-EEEEEeee
Q 017381 200 QEGVFYKGS-LYFTTPEPFSIVRFDLENG-IWETPN----DANDHMTMMLPHE--LTF-FRLVNDGEESNK-LYLIGGVG 269 (372)
Q Consensus 200 ~~~v~~~G~-~y~~~~~~~~i~~yD~~~~-~w~~i~----~p~~~~~~~~p~~--~~~-~~lv~e~~~~g~-L~vv~~~~ 269 (372)
...+..+|. +|........+..||+.++ ....+. ..+.. . .|.. ... ..+... -+|+ |++.+.
T Consensus 102 p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~--~-~~~~~~~~~~~~~~~s--pdg~~l~~~~~-- 174 (361)
T 3scy_A 102 PCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSG--P-DKERQTMPHLHCVRIT--PDGKYLLADDL-- 174 (361)
T ss_dssp EEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCC--S-CTTTCSSCCEEEEEEC--TTSSEEEEEET--
T ss_pred cEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCC--C-CccccCCCcceEEEEC--CCCCEEEEEeC--
Confidence 122333776 4544445567899998643 222111 00000 0 0100 001 122212 4777 555432
Q ss_pred cCCccceEEEEEEcCCCC------EEEE-----EecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEEC
Q 017381 270 RNGISTTMKLWELGCGGN------WIEV-----ERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNV 337 (372)
Q Consensus 270 ~~~~~~~i~vw~l~~~~~------W~~v-----~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~ 337 (372)
....+.+|.++..+. .... ..++.. ......++. ++..+|+.....+.|.+||+
T Consensus 175 ---~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----------~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 175 ---GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG-----------SGPRHLIFNSDGKFAYLINEIGGTVIAFRY 240 (361)
T ss_dssp ---TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT-----------CCEEEEEECTTSSEEEEEETTTCEEEEEEE
T ss_pred ---CCCEEEEEEEcCCCCcccccceeecccccceecCCC-----------CCCeEEEEcCCCCEEEEEcCCCCeEEEEEe
Confidence 246889999976542 3222 112110 001122333 34467887766678999999
Q ss_pred CCCceEECC
Q 017381 338 ARRTWHWLP 346 (372)
Q Consensus 338 ~~~~w~~v~ 346 (372)
.+++++.+.
T Consensus 241 ~~g~~~~~~ 249 (361)
T 3scy_A 241 ADGMLDEIQ 249 (361)
T ss_dssp ETTEEEEEE
T ss_pred cCCceEEeE
Confidence 988775544
No 55
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=90.76 E-value=15 Score=36.98 Aligned_cols=192 Identities=13% Similarity=0.015 Sum_probs=96.9
Q ss_pred cCcEEEEecCCCceEEEEecccc----ceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccc
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTL----SSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~----~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~ 184 (372)
.+|.|++.....+.++.+++... ....+..... ....+++++..++ +||+... ....+++++.....-+.+
T Consensus 434 ~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l-~~P~GLAvD~~~~--~LY~tD~--~~~~I~v~~ldG~~~~~l 508 (791)
T 3m0c_C 434 ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-QAPDGLAVDWIHS--NIYWTDS--VLGTVSVADTKGVKRKTL 508 (791)
T ss_dssp TTTEEEEEETTTTEEEEEEC--------CEEEECSSC-SCCCEEEEETTTT--EEEEEET--TTTEEEEEETTSSSEEEE
T ss_pred cCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCC-CCcceeeeeecCC--cEEEEec--CCCeEEEEeCCCCeEEEE
Confidence 35666666554556666666542 1111111000 1123566764433 6776643 345788888876543333
Q ss_pred ccCCCCccccccCCCcccEEE---CCEEEEeeeCC-cEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCC
Q 017381 185 DIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESN 260 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~-~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g 260 (372)
.... + ..-.++++ +|.|||..... ..|..+++....-..+...+ ...|. .|+. ...+|
T Consensus 509 ~~~~-----l---~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~----l~~P~-----GLav-D~~~~ 570 (791)
T 3m0c_C 509 FREN-----G---SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN----IQWPN-----GITL-DLLSG 570 (791)
T ss_dssp EECT-----T---CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS----CSCEE-----EEEE-ETTTT
T ss_pred EeCC-----C---CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC----CCCce-----EEEE-ecCCC
Confidence 2001 1 12235666 58999987543 57999998754433321010 00222 2332 11478
Q ss_pred eEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 017381 261 KLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (372)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (372)
+||++... ...|.+..++.....+.+..- . .+ ...+.....++.||+.....+.|...|..++
T Consensus 571 ~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~-~-----~l------~~P~glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 571 RLYWVDSK-----LHSISSIDVNGGNRKTILEDE-K-----RL------AHPFSLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEEEEETT-----TTEEEEEETTSCSCEEEEECT-T-----TT------SSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred eEEEEeCC-----CCcEEEEecCCCceEEEecCC-C-----cc------CCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 99998651 244555544322224443221 0 00 0122333467789998877778888887665
No 56
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=90.75 E-value=6.9 Score=33.12 Aligned_cols=221 Identities=15% Similarity=0.101 Sum_probs=111.5
Q ss_pred ccccccCCCCCeeeecCCCCCCCCCceEEEEecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCC
Q 017381 77 QYPLYDSTHGTWRRLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSG 156 (372)
Q Consensus 77 ~~~~~d~~~~~w~~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ 156 (372)
.+..+|+. ++...+.++... .....+....+|-+++.....+.+.++|+. ++...+...........++++..+
T Consensus 42 ~v~~~~~~-~~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g-- 115 (300)
T 2qc5_A 42 KISSLDQS-GRIKEFEVPTPD--AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG-- 115 (300)
T ss_dssp EEEEECTT-SCEEEEECSSTT--CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT--
T ss_pred eEEEECCC-CceEEEECCCCC--CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC--
Confidence 34556776 555555443211 111223334566555554445789999998 776544322111222344444322
Q ss_pred EEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCC
Q 017381 157 YKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPND 234 (372)
Q Consensus 157 ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~ 234 (372)
++++... ....+..|+.. ++..... .+. .. ....++.+ +|.+|+.......|..||. +.++..+.
T Consensus 116 -~l~v~~~--~~~~i~~~~~~-g~~~~~~---~~~-~~---~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~- 182 (300)
T 2qc5_A 116 -DIWFTQL--NGDRIGKLTAD-GTIYEYD---LPN-KG---SYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYP- 182 (300)
T ss_dssp -CEEEEET--TTTEEEEECTT-SCEEEEE---CSS-TT---CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-
T ss_pred -CEEEEcc--CCCeEEEECCC-CCEEEcc---CCC-CC---CCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEee-
Confidence 3444332 23467888876 5554332 111 00 11223444 5788776655567999998 55555443
Q ss_pred CCccccccCCCcccc-cceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceE
Q 017381 235 ANDHMTMMLPHELTF-FRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHV 313 (372)
Q Consensus 235 p~~~~~~~~p~~~~~-~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~ 313 (372)
.|..... ..+... .+|.|++.... .. .|+.++..+...... ++.. . .....
T Consensus 183 --------~~~~~~~~~~i~~d--~~g~l~v~~~~-----~~--~i~~~~~~g~~~~~~-~~~~-----~-----~~~~~ 234 (300)
T 2qc5_A 183 --------LPTNAAAPVGITSG--NDGALWFVEIM-----GN--KIGRITTTGEISEYD-IPTP-----N-----ARPHA 234 (300)
T ss_dssp --------CSSTTCCEEEEEEC--TTSSEEEEETT-----TT--EEEEECTTCCEEEEE-CSST-----T-----CCEEE
T ss_pred --------CCCCCCCcceEEEC--CCCCEEEEccC-----CC--EEEEEcCCCcEEEEE-CCCC-----C-----CCceE
Confidence 2222111 233323 47889887641 12 355556555555432 2211 0 00111
Q ss_pred EEEeeCCEEEEEeecCCeEEEEECCCCceEEC
Q 017381 314 YCFWHQGMICVCCYTWPEILYYNVARRTWHWL 345 (372)
Q Consensus 314 ~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~~v 345 (372)
.++..++.+|+.....+.|..||+ +++....
T Consensus 235 i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 235 ITAGKNSEIWFTEWGANQIGRITN-DNTIQEY 265 (300)
T ss_dssp EEECSTTCEEEEETTTTEEEEECT-TSCEEEE
T ss_pred EEECCCCCEEEeccCCCeEEEECC-CCcEEEE
Confidence 233345668888766678999999 5665543
No 57
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=90.36 E-value=7.5 Score=37.47 Aligned_cols=201 Identities=7% Similarity=-0.039 Sum_probs=97.1
Q ss_pred CcEEEEecCCCceEEEEecccccee-ccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCC
Q 017381 110 KGLLCFSLPSSSSFLVCNLVTLSSR-TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG 188 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~~~-~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~ 188 (372)
++++++.....+.+.|+|+.|++.. .++... ..+.+.+.+.++ .+++.. ....+.+||..+.+-+... .
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~---~p~~v~~SpDGr--~lyv~~---~dg~V~viD~~~~t~~~v~--~ 235 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY---AVHISRLSASGR--YLFVIG---RDGKVNMIDLWMKEPTTVA--E 235 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSS---CEEEEEECTTSC--EEEEEE---TTSEEEEEETTSSSCCEEE--E
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCC---CccceEECCCCC--EEEEEc---CCCeEEEEECCCCCCcEeE--E
Confidence 3466666556789999999998754 344221 112444433322 344433 2457999998522223333 2
Q ss_pred CCccccccCCCcccEEE-----CC-EEEEeeeCCcEEEEEecCCCeeec-cCCCCcccc--ccCCCcccccceeeeccCC
Q 017381 189 FPSMILSQSSHQEGVFY-----KG-SLYFTTPEPFSIVRFDLENGIWET-PNDANDHMT--MMLPHELTFFRLVNDGEES 259 (372)
Q Consensus 189 ~p~~~~~~~~~~~~v~~-----~G-~~y~~~~~~~~i~~yD~~~~~w~~-i~~p~~~~~--~~~p~~~~~~~lv~e~~~~ 259 (372)
++.+.- ....++. +| .+|..+.....+.++|..+.+-.. +...+...+ .+.|..+ ...++.. -+
T Consensus 236 i~~G~~----P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~r-va~i~~s--~~ 308 (567)
T 1qks_A 236 IKIGSE----ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPR-VAAILAS--HY 308 (567)
T ss_dssp EECCSE----EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCC-EEEEEEC--SS
T ss_pred EecCCC----CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCc-eEEEEEc--CC
Confidence 322111 1112333 56 566666666779999987654332 221100000 0001100 1123321 33
Q ss_pred CeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEE-eeCCEEEEEeecCCeEEEEEC
Q 017381 260 NKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNV 337 (372)
Q Consensus 260 g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~v~~yd~ 337 (372)
+..+++... ... .||..|-... ..++..++... ...-..+ ..+..+++....++.|.++|.
T Consensus 309 ~~~~vv~~~----~~g--~v~~vd~~~~~~~~v~~i~~~~-----------~~~d~~~~pdgr~~~va~~~sn~V~ViD~ 371 (567)
T 1qks_A 309 RPEFIVNVK----ETG--KILLVDYTDLNNLKTTEISAER-----------FLHDGGLDGSHRYFITAANARNKLVVIDT 371 (567)
T ss_dssp SSEEEEEET----TTT--EEEEEETTCSSEEEEEEEECCS-----------SEEEEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred CCEEEEEec----CCC--eEEEEecCCCccceeeeeeccc-----------cccCceECCCCCEEEEEeCCCCeEEEEEC
Confidence 444444331 112 3444443332 44555553211 0111122 245567777767789999999
Q ss_pred CCCceEE
Q 017381 338 ARRTWHW 344 (372)
Q Consensus 338 ~~~~w~~ 344 (372)
++++...
T Consensus 372 ~t~kl~~ 378 (567)
T 1qks_A 372 KEGKLVA 378 (567)
T ss_dssp TTTEEEE
T ss_pred CCCcEEE
Confidence 9997653
No 58
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=90.25 E-value=7.7 Score=32.82 Aligned_cols=195 Identities=15% Similarity=0.101 Sum_probs=100.1
Q ss_pred EEecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
....+|-+++.....+.+.++|+. ++....+..........++++.. . ++++... ....+.+|+.. +..+...
T Consensus 21 ~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~--g-~l~v~~~--~~~~i~~~~~~-g~~~~~~ 93 (299)
T 2z2n_A 21 TVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSD--G-EVWFTEN--AANKIGRITKK-GIIKEYT 93 (299)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTT--S-CEEEEET--TTTEEEEECTT-SCEEEEE
T ss_pred EECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCC--C-CEEEeCC--CCCeEEEECCC-CcEEEEe
Confidence 334566555554335789999998 77665543211112233444332 2 3444322 23467888875 4444333
Q ss_pred cCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcc-cccceeeeccCCCeE
Q 017381 186 IDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHEL-TFFRLVNDGEESNKL 262 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~-~~~~lv~e~~~~g~L 262 (372)
.|. ......++.+ +|.+|+.......+..||+ +.+...+. .|... ....+... -+|+|
T Consensus 94 ---~~~----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~---------~~~~~~~~~~i~~~--~~g~l 154 (299)
T 2z2n_A 94 ---LPN----PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYE---------LPNKGSYPSFITLG--SDNAL 154 (299)
T ss_dssp ---CSS----TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEE---------CSSTTCCEEEEEEC--TTSCE
T ss_pred ---CCC----cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEec---------CCCCCCCCceEEEc--CCCCE
Confidence 111 0011223444 5788876655567999998 55555432 22111 11233323 57889
Q ss_pred EEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCce
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
++.... .. .|+.++..++...+ .++.. . ....-.++..++.+|+.....+.|..||+ +++.
T Consensus 155 ~v~~~~-----~~--~i~~~~~~g~~~~~-~~~~~-----~-----~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 215 (299)
T 2z2n_A 155 WFTENQ-----NN--AIGRITESGDITEF-KIPTP-----A-----SGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI 215 (299)
T ss_dssp EEEETT-----TT--EEEEECTTCCEEEE-ECSST-----T-----CCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred EEEeCC-----CC--EEEEEcCCCcEEEe-eCCCC-----C-----CcceeEEECCCCCEEEEccCCceEEEECC-CCcE
Confidence 887531 12 45666664455543 22211 0 00111233344668888766678999999 7777
Q ss_pred EEC
Q 017381 343 HWL 345 (372)
Q Consensus 343 ~~v 345 (372)
..+
T Consensus 216 ~~~ 218 (299)
T 2z2n_A 216 TEF 218 (299)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 59
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=90.11 E-value=10 Score=34.04 Aligned_cols=204 Identities=11% Similarity=0.083 Sum_probs=97.6
Q ss_pred Cc-EEEEecCCCceEEEEeccccceeccC-C----CC-CCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcc
Q 017381 110 KG-LLCFSLPSSSSFLVCNLVTLSSRTID-F----PT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWS 182 (372)
Q Consensus 110 ~G-ll~~~~~~~~~~~v~NP~t~~~~~lP-~----~~-~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~ 182 (372)
+| +++... .++.+.+||..+++...-. . +. .......+.+.+.+. .+++.++ ....+.+||..++...
T Consensus 93 ~~~~l~s~s-~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~--~~l~s~~--~dg~i~iwd~~~~~~~ 167 (402)
T 2aq5_A 93 NDNVIASGS-EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQ--NVLLSAG--CDNVILVWDVGTGAAV 167 (402)
T ss_dssp CTTEEEEEE-TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBT--TEEEEEE--TTSCEEEEETTTTEEE
T ss_pred CCCEEEEEe-CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCC--CEEEEEc--CCCEEEEEECCCCCcc
Confidence 45 444333 4688999999887542211 0 00 011112333333221 2333333 2357889998877542
Q ss_pred ccccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCC
Q 017381 183 KFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESN 260 (372)
Q Consensus 183 ~~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g 260 (372)
..- .... .......+.+ +|...+.+.....|..||+.+.+-...... .........+... -+|
T Consensus 168 ~~~--~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~ 232 (402)
T 2aq5_A 168 LTL--GPDV----HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR-------PHEGTRPVHAVFV--SEG 232 (402)
T ss_dssp EEE--CTTT----CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-------SSCSSSCCEEEEC--STT
T ss_pred EEE--ecCC----CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc-------CCCCCcceEEEEc--CCC
Confidence 211 0000 0011122333 566666666666799999987654332101 1111111122212 578
Q ss_pred eEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEECCC
Q 017381 261 KLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVAR 339 (372)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~ 339 (372)
++++++.. ......+.+|.+.....-.....++.. ......++. .++.+++.+...+.|.+||+.+
T Consensus 233 ~~l~~g~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~-----------~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 233 KILTTGFS--RMSERQVALWDTKHLEEPLSLQELDTS-----------SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp EEEEEEEC--TTCCEEEEEEETTBCSSCSEEEECCCC-----------SSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred cEEEEecc--CCCCceEEEEcCccccCCceEEeccCC-----------CceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 87777631 112467899987543331111122100 001111222 4556666665567899999998
Q ss_pred Cc--eEECC
Q 017381 340 RT--WHWLP 346 (372)
Q Consensus 340 ~~--w~~v~ 346 (372)
++ ...+.
T Consensus 300 ~~~~~~~l~ 308 (402)
T 2aq5_A 300 EAPFLHYLS 308 (402)
T ss_dssp STTCEEEEE
T ss_pred CCcceEeec
Confidence 87 55444
No 60
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=89.92 E-value=8.7 Score=32.97 Aligned_cols=158 Identities=11% Similarity=-0.020 Sum_probs=86.4
Q ss_pred eEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccE-EECCEEEEeeeCCcEEEEEecC
Q 017381 147 LLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGV-FYKGSLYFTTPEPFSIVRFDLE 225 (372)
Q Consensus 147 ~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v-~~~G~~y~~~~~~~~i~~yD~~ 225 (372)
++.+++. . +++...+......+.++|..+++=...- .++. .....++ ..++.+|..+.....+.+||..
T Consensus 25 Gl~~~~d--g-~Lyvstg~~~~s~v~~iD~~tg~v~~~i--~l~~-----~~fgeGi~~~g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 25 GLVYAEN--D-TLFESTGLYGRSSVRQVALQTGKVENIH--KMDD-----SYFGEGLTLLNEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EEEECST--T-EEEEEECSTTTCEEEEEETTTCCEEEEE--ECCT-----TCCEEEEEEETTEEEEEETTCSEEEEEETT
T ss_pred cEEEeCC--C-eEEEECCCCCCCEEEEEECCCCCEEEEE--ecCC-----CcceEEEEEeCCEEEEEEecCCEEEEEECC
Confidence 4555432 2 6777665555678999999998632221 1221 1222333 3466999998877889999998
Q ss_pred CCeee-ccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhh
Q 017381 226 NGIWE-TPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMS 304 (372)
Q Consensus 226 ~~~w~-~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~ 304 (372)
+.+-. .+. .+ ......+.. -+++||+..+ .. .|+.+|..+. ..+.+++.... +
T Consensus 95 t~~v~~~i~---------~g-~~~g~glt~---Dg~~l~vs~g------s~--~l~viD~~t~-~v~~~I~Vg~~----~ 148 (266)
T 2iwa_A 95 TLSNIKNFT---------HQ-MKDGWGLAT---DGKILYGSDG------TS--ILYEIDPHTF-KLIKKHNVKYN----G 148 (266)
T ss_dssp TTEEEEEEE---------CC-SSSCCEEEE---CSSSEEEECS------SS--EEEEECTTTC-CEEEEEECEET----T
T ss_pred CCcEEEEEE---------CC-CCCeEEEEE---CCCEEEEECC------CC--eEEEEECCCC-cEEEEEEECCC----C
Confidence 76443 222 22 012233431 3455776543 22 4666665432 23333321100 0
Q ss_pred hccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCce
Q 017381 305 VCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 305 ~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
........+.+. ++.+|+.....+.|.+-|+++++-
T Consensus 149 ~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 149 HRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp EECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCE
T ss_pred cccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcE
Confidence 000001122322 678998877778999999999865
No 61
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.53 E-value=2.8 Score=36.07 Aligned_cols=136 Identities=10% Similarity=-0.138 Sum_probs=75.8
Q ss_pred cccccCCCCCee-eecCCCCCCCCCceEEEEecCcEEEEecCCCceEEEEeccccce-eccCCCCCCCCceeEEEEeCCC
Q 017381 78 YPLYDSTHGTWR-RLSLPYSLLLPSAATLLSSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVSTPS 155 (372)
Q Consensus 78 ~~~~d~~~~~w~-~l~~~~~~~~~~~~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~~-~~lP~~~~~~~~~~~~~~~~~~ 155 (372)
+..+|+..++-. .+ ++. .....-++..++-|+......+.++|+|+.|.+. .++|..+ .+.|+...+
T Consensus 77 v~~iD~~Tgkv~~~~-l~~----~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~-----eGwGLt~Dg- 145 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLG----NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSG-----EGWGLCYWN- 145 (268)
T ss_dssp EEECCSSCSSCSEEE-ECT----TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSS-----CCCCEEEET-
T ss_pred EEEEECCCCcEEeEE-CCC----CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCC-----ceeEEecCC-
Confidence 556677665432 23 331 1111224445666666665678999999999874 4555422 123333322
Q ss_pred CEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCeee
Q 017381 156 GYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWE 230 (372)
Q Consensus 156 ~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w~ 230 (372)
.++++.. ....+.++|+++.+=...- .+.....+......-.+.+|.+|.-.+....|.++|+++.+-.
T Consensus 146 -~~L~vSd---Gs~~l~~iDp~T~~v~~~I--~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 146 -GKLVRSD---GGTMLTFHEPDGFALVGAV--QVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVV 214 (268)
T ss_dssp -TEEEEEC---SSSEEEEECTTTCCEEEEE--ECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEE
T ss_pred -CEEEEEC---CCCEEEEEcCCCCeEEEEE--EeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEE
Confidence 2666654 2568899999986532111 1111001100112234569999977766778999999987653
No 62
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=89.39 E-value=8.8 Score=32.30 Aligned_cols=197 Identities=13% Similarity=-0.005 Sum_probs=101.0
Q ss_pred EecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
...+|.|++.....+.+.++++.++....+-.... ....+++++..++ ++++... ....+.+++.....-+...
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~--~lyv~d~--~~~~I~~~~~~g~~~~~~~- 117 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGR--TIFWTDS--QLDRIEVAKMDGTQRRVLF- 117 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTT--EEEEEET--TTTEEEEEETTSCSCEEEE-
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCC--eEEEEEC--CCCEEEEEEcCCCCEEEEE-
Confidence 33467777766556789999998765433321111 1223556654322 5665542 3457888887643322221
Q ss_pred CCCCccccccCCCcccEEE---CCEEEEeeeC--CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe
Q 017381 187 DGFPSMILSQSSHQEGVFY---KGSLYFTTPE--PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~--~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~ 261 (372)
+. .+ ....++.+ +|.+||.... ...|..+++....-..+...+ ...|. .+... ..++.
T Consensus 118 ---~~-~~---~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~----~~~P~-----gia~d-~~~~~ 180 (267)
T 1npe_A 118 ---DT-GL---VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDN----LGLPN-----GLTFD-AFSSQ 180 (267)
T ss_dssp ---CS-SC---SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTT----CSCEE-----EEEEE-TTTTE
T ss_pred ---EC-CC---CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECC----CCCCc-----EEEEc-CCCCE
Confidence 11 00 11234444 5899998754 356888887644322221000 00122 22212 02578
Q ss_pred EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCc
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (372)
||+.... ...|.++ +.++.-... .++ . . .........++.+|+.....+.|..+|+++++
T Consensus 181 lyv~d~~-----~~~I~~~--~~~g~~~~~-~~~-~-----~------~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 181 LCWVDAG-----THRAECL--NPAQPGRRK-VLE-G-----L------QYPFAVTSYGKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp EEEEETT-----TTEEEEE--ETTEEEEEE-EEE-C-----C------CSEEEEEEETTEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEECC-----CCEEEEE--ecCCCceEE-Eec-C-----C------CCceEEEEeCCEEEEEECCCCeEEEEeCCCCC
Confidence 8888652 2344444 443321110 111 0 0 01122233578899988777899999999876
Q ss_pred e-EECC
Q 017381 342 W-HWLP 346 (372)
Q Consensus 342 w-~~v~ 346 (372)
. ..++
T Consensus 241 ~~~~i~ 246 (267)
T 1npe_A 241 EMDTFH 246 (267)
T ss_dssp EEEEEC
T ss_pred ceEEEc
Confidence 5 3444
No 63
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=88.91 E-value=11 Score=32.74 Aligned_cols=201 Identities=10% Similarity=0.048 Sum_probs=97.5
Q ss_pred EecCcEEEEecCCCceEEEEecccccee-ccCCCCCC-------CCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCC
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSR-TIDFPTYP-------FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD 178 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~-~lP~~~~~-------~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~ 178 (372)
...+..+++.....+.+.++|+.+++.. .++..... .....+++.+.++ ++++... .....+.+||..+
T Consensus 97 s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~-~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 97 NNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN--TVYISGI-GKESVIWVVDGGN 173 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT--EEEEEEE-SSSCEEEEEETTT
T ss_pred CCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC--EEEEEec-CCCceEEEEcCCC
Confidence 3334456665555679999999998853 33321111 1123455554333 3444332 2345789999886
Q ss_pred CCccccccCCCCccccccCCCcccEEE-CCEEEEeeeCCcEEEEEecCCCeeec-cCCCCccccccCCCcccccceeeec
Q 017381 179 QSWSKFDIDGFPSMILSQSSHQEGVFY-KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDG 256 (372)
Q Consensus 179 ~~W~~~~~~~~p~~~~~~~~~~~~v~~-~G~~y~~~~~~~~i~~yD~~~~~w~~-i~~p~~~~~~~~p~~~~~~~lv~e~ 256 (372)
++=... ++. . .......++. +|...+++.....+..||+.+.+-.. +..+.. -+.. ....+...
T Consensus 174 ~~~~~~----~~~--~-~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~-~~~~~~~s- 239 (353)
T 3vgz_A 174 IKLKTA----IQN--T-GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDD-----GKEH-FFINISLD- 239 (353)
T ss_dssp TEEEEE----ECC--C-CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCS-----SSCC-CEEEEEEE-
T ss_pred CceEEE----ecC--C-CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCC-----CCCc-ccceEEEC-
Confidence 542211 110 0 0011112222 55544444445578899998775543 221100 0111 11112211
Q ss_pred cCCCe-EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEE
Q 017381 257 EESNK-LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYY 335 (372)
Q Consensus 257 ~~~g~-L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~y 335 (372)
-+|+ |++... ....+.+|.++ .++-.....++. ...+..-.+++.+|+.....+.|.+|
T Consensus 240 -~dg~~l~~~~~-----~~~~v~~~d~~-~~~~~~~~~~~~-------------~~~~~~s~dg~~l~v~~~~~~~v~~~ 299 (353)
T 3vgz_A 240 -TARQRAFITDS-----KAAEVLVVDTR-NGNILAKVAAPE-------------SLAVLFNPARNEAYVTHRQAGKVSVI 299 (353)
T ss_dssp -TTTTEEEEEES-----SSSEEEEEETT-TCCEEEEEECSS-------------CCCEEEETTTTEEEEEETTTTEEEEE
T ss_pred -CCCCEEEEEeC-----CCCEEEEEECC-CCcEEEEEEcCC-------------CceEEECCCCCEEEEEECCCCeEEEE
Confidence 3555 655542 23567777653 233222222211 11122223456688887667889999
Q ss_pred ECCCCceEE
Q 017381 336 NVARRTWHW 344 (372)
Q Consensus 336 d~~~~~w~~ 344 (372)
|+++++...
T Consensus 300 d~~~~~~~~ 308 (353)
T 3vgz_A 300 DAKSYKVVK 308 (353)
T ss_dssp ETTTTEEEE
T ss_pred ECCCCeEEE
Confidence 999887654
No 64
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=88.79 E-value=8.8 Score=33.91 Aligned_cols=141 Identities=10% Similarity=0.034 Sum_probs=62.1
Q ss_pred CCceEEEEeccccceeccCCCCCC-CCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC-ccccccCCCCcccccc
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTYP-FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKFDIDGFPSMILSQ 196 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~~-~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~-W~~~~~~~~p~~~~~~ 196 (372)
.++.+.+||..++.+..+..+... .....+.+.+.+ +.++.++ ....+.+||..++. |.... .+.. .
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~s--~d~~v~vwd~~~~~~~~~~~--~~~~----~ 99 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS---NRIVTCS--QDRNAYVYEKRPDGTWKQTL--VLLR----L 99 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTT---CCEEEEE--TTSSEEEC------CCCCEE--ECCC----C
T ss_pred CCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCC---CEEEEEe--CCCeEEEEEcCCCCceeeee--Eecc----c
Confidence 457888999998866555444321 112234443332 2333333 23568899988876 65443 1111 0
Q ss_pred CCCcccEEE--CCEEEEeeeCCcEEEEEecCCCe-eeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCc
Q 017381 197 SSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI-WETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (372)
Q Consensus 197 ~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~-w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~ 273 (372)
......+.+ +|...+.+.....|..||+.+.+ |..+..-. .+.......+... -+|++++.+..
T Consensus 100 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~------~~h~~~v~~~~~~--~~~~~l~~~~~----- 166 (377)
T 3dwl_C 100 NRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK------RPLRSTILSLDWH--PNNVLLAAGCA----- 166 (377)
T ss_dssp SSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC------SSCCSCEEEEEEC--TTSSEEEEEES-----
T ss_pred CCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee------cccCCCeEEEEEc--CCCCEEEEEeC-----
Confidence 011112222 45555555555568889987654 22211000 1111111122211 36776666542
Q ss_pred cceEEEEEEc
Q 017381 274 STTMKLWELG 283 (372)
Q Consensus 274 ~~~i~vw~l~ 283 (372)
...+.+|.+.
T Consensus 167 d~~i~iwd~~ 176 (377)
T 3dwl_C 167 DRKAYVLSAY 176 (377)
T ss_dssp SSCEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 2578999985
No 65
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=88.57 E-value=14 Score=33.39 Aligned_cols=197 Identities=11% Similarity=0.073 Sum_probs=96.8
Q ss_pred cCcEEEEecCCCceEEEEeccccceeccCCCC-C-CCC--ceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccc
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPT-Y-PFD--FELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~-~-~~~--~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~ 184 (372)
.+|.+++....++.+.+||+.+++.....+.. . ... ...+.+. .+. ++++.+. ....+.+||..+++-...
T Consensus 132 ~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~~~s~~--~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 132 DNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIP--EHN-ELWVSQM--QANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp SSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEG--GGT-EEEEEEG--GGTEEEEEETTTCCEEEE
T ss_pred CCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEc--CCC-EEEEEEC--CCCEEEEEECCCceEEEE
Confidence 36666665555578999999998876543321 1 111 1123331 122 4554443 235788999887643221
Q ss_pred ccCCCCccccccCCCcccEEE--CC-EEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe
Q 017381 185 DIDGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G-~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~ 261 (372)
- +. .......+.+ +| .+|..+.....|..||+.+.+..... + .... ...+... -+|+
T Consensus 207 ~----~~----~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~-~-------~~~~--~~~~~~~--~~g~ 266 (433)
T 3bws_A 207 V----DL----TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT-D-------KIGL--PRGLLLS--KDGK 266 (433)
T ss_dssp E----EC----SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC-C-------CCSE--EEEEEEC--TTSS
T ss_pred E----cC----CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe-c-------CCCC--ceEEEEc--CCCC
Confidence 1 00 0011112222 34 45555545567999999877654321 1 1111 1122211 4665
Q ss_pred EEEEEeeecCC---ccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEEC
Q 017381 262 LYLIGGVGRNG---ISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNV 337 (372)
Q Consensus 262 L~vv~~~~~~~---~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~ 337 (372)
.++++...... ....+.+|.+.. ++-......+. .....++. .++.+++.....+.+.+||+
T Consensus 267 ~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~~~~~-------------~~~~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 267 ELYIAQFSASNQESGGGRLGIYSMDK-EKLIDTIGPPG-------------NKRHIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp EEEEEEEESCTTCSCCEEEEEEETTT-TEEEEEEEEEE-------------CEEEEEECSSTTEEEEEETTTTEEEEEET
T ss_pred EEEEEECCCCccccCCCeEEEEECCC-CcEEeeccCCC-------------CcceEEECCCCCEEEEEecCCCEEEEEEC
Confidence 55544432111 124678887643 22111111110 00111222 34567787666778999999
Q ss_pred CCCceEE
Q 017381 338 ARRTWHW 344 (372)
Q Consensus 338 ~~~~w~~ 344 (372)
++++...
T Consensus 333 ~~~~~~~ 339 (433)
T 3bws_A 333 KEKKVQK 339 (433)
T ss_dssp TTTEEEE
T ss_pred CCCcEEE
Confidence 9876543
No 66
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=88.36 E-value=22 Score=35.48 Aligned_cols=193 Identities=9% Similarity=0.088 Sum_probs=96.0
Q ss_pred EecCcEEEEecCCCceEEEEeccccceeccCCCCC-CC-CceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PF-DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~-~~-~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~ 184 (372)
...+|-+.+... +.++++||.++++..++.... .. .....++...... ++.+ +.. ...+..|+..+++++..
T Consensus 457 ~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWi-gt~--~~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 457 EDKNKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEG-RFWI-GTF--GGGVGIYTPDMQLVRKF 530 (781)
T ss_dssp ECTTSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTC-CEEE-EES--SSCEEEECTTCCEEEEE
T ss_pred ECCCCCEEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCC-CEEE-EEc--CCCEEEEeCCCCeEEEc
Confidence 344565555442 568889999988876653321 00 1111122211222 2332 211 13477888888888766
Q ss_pred ccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEE-EEEecCCCeeeccCCC-CccccccCCCcccccceeeeccCCC
Q 017381 185 DIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSI-VRFDLENGIWETPNDA-NDHMTMMLPHELTFFRLVNDGEESN 260 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i-~~yD~~~~~w~~i~~p-~~~~~~~~p~~~~~~~lv~e~~~~g 260 (372)
. . +. .++. .....++. +|.+ |++.. ..+ ..||+.++++...... + +|.... ..++.+ .+|
T Consensus 531 ~--~-~~-~l~~-~~i~~i~~d~~g~l-Wi~T~-~Glv~~~d~~~~~~~~~~~~~g------l~~~~i-~~i~~d--~~g 594 (781)
T 3v9f_A 531 N--Q-YE-GFCS-NTINQIYRSSKGQM-WLATG-EGLVCFPSARNFDYQVFQRKEG------LPNTHI-RAISED--KNG 594 (781)
T ss_dssp C--T-TT-TCSC-SCEEEEEECTTSCE-EEEET-TEEEEESCTTTCCCEEECGGGT------CSCCCC-CEEEEC--SSS
T ss_pred c--C-CC-CCCC-CeeEEEEECCCCCE-EEEEC-CCceEEECCCCCcEEEccccCC------CCCceE-EEEEEC--CCC
Confidence 4 1 11 1211 11223444 4665 45544 457 8999998887764311 1 444332 234423 578
Q ss_pred eEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCc-eEEEEeeCCEEEEEeecCCeEEEEECC
Q 017381 261 KLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYD-HVYCFWHQGMICVCCYTWPEILYYNVA 338 (372)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~v~~yd~~ 338 (372)
.|++.+. . .+..+++.+. +.....-. . +.. .... ...+...++.+++.+ .+.+..||++
T Consensus 595 ~lW~~t~-------~--Gl~~~~~~~~~~~~~~~~d-G-----l~~--~~f~~~~~~~~~~G~l~~g~--~~Gl~~f~p~ 655 (781)
T 3v9f_A 595 NIWASTN-------T--GISCYITSKKCFYTYDHSN-N-----IPQ--GSFISGCVTKDHNGLIYFGS--INGLCFFNPD 655 (781)
T ss_dssp CEEEECS-------S--CEEEEETTTTEEEEECGGG-T-----CCS--SCEEEEEEEECTTSCEEEEE--TTEEEEECSC
T ss_pred CEEEEcC-------C--ceEEEECCCCceEEecccC-C-----ccc--cccccCceEECCCCEEEEEC--CCceEEEChh
Confidence 8988753 1 2455555544 54332211 0 000 0011 112234567788866 4568888887
Q ss_pred CC
Q 017381 339 RR 340 (372)
Q Consensus 339 ~~ 340 (372)
+-
T Consensus 656 ~~ 657 (781)
T 3v9f_A 656 IA 657 (781)
T ss_dssp CG
T ss_pred hc
Confidence 53
No 67
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=88.28 E-value=11 Score=32.20 Aligned_cols=195 Identities=10% Similarity=0.082 Sum_probs=91.5
Q ss_pred ecCcEEEEecCCCceEEEEeccccceec-cCCC---CCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFP---TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~-lP~~---~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~ 183 (372)
+.+|-+++... ++.+.+||..+++... +... ........+.+.+. . +.+++++ ....+.+|+..++....
T Consensus 60 ~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~~~~--~d~~i~~~d~~~~~~~~ 133 (337)
T 1gxr_A 60 SNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD--G-CTLIVGG--EASTLSIWDLAAPTPRI 133 (337)
T ss_dssp CSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT--S-SEEEEEE--SSSEEEEEECCCC--EE
T ss_pred ecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC--C-CEEEEEc--CCCcEEEEECCCCCcce
Confidence 44553333333 5889999998765322 1111 11111223334332 2 2333332 23578999998877544
Q ss_pred cccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe
Q 017381 184 FDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (372)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~ 261 (372)
.. .+.. .......+.+ +|...+.+.....+..||+.+.+....... ..... ..+... -+|+
T Consensus 134 ~~--~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~-------~~~~i--~~~~~~--~~~~ 196 (337)
T 1gxr_A 134 KA--ELTS----SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG-------HTDGA--SCIDIS--NDGT 196 (337)
T ss_dssp EE--EEEC----SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCE--EEEEEC--TTSS
T ss_pred ee--eccc----CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec-------ccCce--EEEEEC--CCCC
Confidence 33 1111 0011112222 566655665555699999987654432101 11111 122211 3676
Q ss_pred EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEE--EEeeCCEEEEEeecCCeEEEEECCC
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVY--CFWHQGMICVCCYTWPEILYYNVAR 339 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~v~~yd~~~ 339 (372)
+++++.. ...+.+|.+..... +..+.. ...+. .+..++..++.+...+.+.+||+++
T Consensus 197 ~l~~~~~-----dg~i~~~d~~~~~~---~~~~~~-------------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 197 KLWTGGL-----DNTVRSWDLREGRQ---LQQHDF-------------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp EEEEEET-----TSEEEEEETTTTEE---EEEEEC-------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred EEEEEec-----CCcEEEEECCCCce---EeeecC-------------CCceEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 6666541 35788997753221 111110 01122 2223333444444556799999998
Q ss_pred CceEECC
Q 017381 340 RTWHWLP 346 (372)
Q Consensus 340 ~~w~~v~ 346 (372)
++-..+.
T Consensus 256 ~~~~~~~ 262 (337)
T 1gxr_A 256 PDKYQLH 262 (337)
T ss_dssp SCEEEEC
T ss_pred CCeEEEc
Confidence 7655543
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=88.26 E-value=13 Score=32.88 Aligned_cols=182 Identities=10% Similarity=-0.003 Sum_probs=89.2
Q ss_pred CceEEEEeccccceeccCCC-CCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCC
Q 017381 120 SSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~-~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (372)
++.+.+||..+++....-.. ........+.+.+. +-+.++.++ ....+.+||..++...... .... ...
T Consensus 95 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~--~d~~i~iwd~~~~~~~~~~--~~~~----~~~ 164 (383)
T 3ei3_B 95 GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF--NTNQLFVSS--IRGATTLRDFSGSVIQVFA--KTDS----WDY 164 (383)
T ss_dssp TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT--EEEEEEEEE--TTTEEEEEETTSCEEEEEE--CCCC----SSC
T ss_pred CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC--CCCEEEEEe--CCCEEEEEECCCCceEEEe--ccCC----CCC
Confidence 56788999988876544322 11122233444321 223444443 3457889999876555443 1111 000
Q ss_pred CcccEE--ECCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe-EEEEEeeecCCccc
Q 017381 199 HQEGVF--YKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGIST 275 (372)
Q Consensus 199 ~~~~v~--~~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~vv~~~~~~~~~~ 275 (372)
....+. -+|...+.+.....|..||+..+....+.. ...... .+... -+|+ +++.+.. ..
T Consensus 165 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------h~~~v~--~~~~~--~~~~~~l~s~~~-----d~ 227 (383)
T 3ei3_B 165 WYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKL--------HKAKVT--HAEFN--PRCDWLMATSSV-----DA 227 (383)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEEC--------SSSCEE--EEEEC--SSCTTEEEEEET-----TS
T ss_pred CeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEecc--------CCCcEE--EEEEC--CCCCCEEEEEeC-----CC
Confidence 111222 146655566666689999986544443321 111111 12111 3565 6665541 35
Q ss_pred eEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEE--ee-CCEEEEEeecCCeEEEEECCCCc
Q 017381 276 TMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WH-QGMICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 276 ~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~-~~~i~~~~~~~~~v~~yd~~~~~ 341 (372)
.+.+|.+..... -..+..+.. ...+.++ .. ++..++.....+.|.+||+++.+
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~-------------~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 228 TVKLWDLRNIKDKNSYIAEMPH-------------EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWS 284 (383)
T ss_dssp EEEEEEGGGCCSTTCEEEEEEC-------------SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTT
T ss_pred EEEEEeCCCCCcccceEEEecC-------------CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCc
Confidence 799998864321 122222210 0122222 22 34444555456789999998754
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=88.24 E-value=12 Score=32.28 Aligned_cols=141 Identities=13% Similarity=0.072 Sum_probs=62.8
Q ss_pred ceEEEEECCCCCccccccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCc
Q 017381 169 NYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHE 246 (372)
Q Consensus 169 ~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~ 246 (372)
..+.+||..++.-...- .. ....-..+.+ +|.+.+.++....|..||+.+.+-.... . ....
T Consensus 195 ~~i~i~d~~~~~~~~~~----~~----h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~-~-------~~~~ 258 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNH----IG----HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-D-------GGDI 258 (340)
T ss_dssp SCEEEEETTTTEEEEEE----CC----CSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE-E-------CSSC
T ss_pred CEEEEEECCCCceeeEe----cC----CCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee-c-------CCce
Confidence 46788888776432221 00 0011112333 4666666666667999998876443211 1 1111
Q ss_pred ccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEEEE
Q 017381 247 LTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICV 324 (372)
Q Consensus 247 ~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ 324 (372)
. ..+... -++.+...+. ...+.+|.++.... +..+..+....... .....+.++ ..++..++
T Consensus 259 v--~~~~~~--~~~~~~~~~~------d~~i~iwd~~~~~~---~~~~~~~~~~~~~~---~h~~~v~~l~~s~dg~~l~ 322 (340)
T 4aow_A 259 I--NALCFS--PNRYWLCAAT------GPSIKIWDLEGKII---VDELKQEVISTSSK---AEPPQCTSLAWSADGQTLF 322 (340)
T ss_dssp E--EEEEEC--SSSSEEEEEE------TTEEEEEETTTTEE---EEEECCC----------CCCCCEEEEEECTTSSEEE
T ss_pred E--EeeecC--CCCceeeccC------CCEEEEEECCCCeE---EEeccccceeeecc---CCCCCEEEEEECCCCCEEE
Confidence 1 112211 2444443322 25788997643221 11121111000000 011223333 33444555
Q ss_pred EeecCCeEEEEECCCCc
Q 017381 325 CCYTWPEILYYNVARRT 341 (372)
Q Consensus 325 ~~~~~~~v~~yd~~~~~ 341 (372)
.+...+.|.+||+++++
T Consensus 323 sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 323 AGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEETTSCEEEEEEEC--
T ss_pred EEeCCCEEEEEeCCCcC
Confidence 55556789999999875
No 70
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.17 E-value=15 Score=33.47 Aligned_cols=214 Identities=7% Similarity=-0.039 Sum_probs=105.2
Q ss_pred EecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC-ccccc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKFD 185 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~-W~~~~ 185 (372)
...+|-|++.......+.++|+.+++...+...... ..++++..++ .+++.... ....+.+++..++. .+...
T Consensus 138 ~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~---~~ia~~~~g~--~l~~~d~~-~~~~I~~~d~~~~~~~~~~g 211 (409)
T 3hrp_A 138 AVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKG---GKPAVTKDKQ--RVYSIGWE-GTHTVYVYMKASGWAPTRIG 211 (409)
T ss_dssp ECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCB---CBCEECTTSS--EEEEEBSS-TTCEEEEEEGGGTTCEEEEE
T ss_pred EeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCC---CceeEecCCC--cEEEEecC-CCceEEEEEcCCCceeEEee
Confidence 345676666655557899999999887665433111 1145544332 44544321 22278888876542 12221
Q ss_pred cCCCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccc-c-ceeeeccC-C
Q 017381 186 IDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTF-F-RLVNDGEE-S 259 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~-~-~lv~e~~~-~ 259 (372)
..+.... ....++.+ +|.+|+ +.....|..||+.+.....+..... ....... . .+... - +
T Consensus 212 --~~~~~~~---~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~-----~g~~~~~P~~~ia~~--p~~ 278 (409)
T 3hrp_A 212 --QLGSTFS---GKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLEL-----SGSLGTNPGPYLIYY--FVD 278 (409)
T ss_dssp --ECCTTSC---SCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCC-----CSCCCCSSCCEEEEE--TTT
T ss_pred --eccchhc---CCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccc-----cCCCCCCccccEEEe--CCC
Confidence 0110000 11123333 589998 4444579999998765444310000 1111111 1 34322 3 6
Q ss_pred CeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecC-hHHHHHhhhh--ccCCCceEEEEeeCCEEEEEee-cCCeEEEE
Q 017381 260 NKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVP-EMMCRKFMSV--CYHNYDHVYCFWHQGMICVCCY-TWPEILYY 335 (372)
Q Consensus 260 g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp-~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~-~~~~v~~y 335 (372)
|.||+.... .. .|++++.++.-..+..-+ ..-..+-... .+ ....-.++..++.+|+... ..+.|..+
T Consensus 279 g~lyv~d~~-----~~--~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~-~~P~gia~d~dG~lyvad~~~~~~I~~~ 350 (409)
T 3hrp_A 279 SNFYMSDQN-----LS--SVYKITPDGECEWFCGSATQKTVQDGLREEALF-AQPNGMTVDEDGNFYIVDGFKGYCLRKL 350 (409)
T ss_dssp TEEEEEETT-----TT--EEEEECTTCCEEEEEECTTCCSCBCEEGGGCBC-SSEEEEEECTTCCEEEEETTTTCEEEEE
T ss_pred CEEEEEeCC-----CC--EEEEEecCCCEEEEEeCCCCCCcCCCcccccEe-CCCeEEEEeCCCCEEEEeCCCCCEEEEE
Confidence 889988641 22 455556555532221111 0000000000 00 0111223344556999987 77889999
Q ss_pred ECCCCceEECCC
Q 017381 336 NVARRTWHWLPS 347 (372)
Q Consensus 336 d~~~~~w~~v~~ 347 (372)
|+.+++...+..
T Consensus 351 ~~~~G~v~~~~g 362 (409)
T 3hrp_A 351 DILDGYVSTVAG 362 (409)
T ss_dssp ETTTTEEEEEEE
T ss_pred ECCCCEEEEEeC
Confidence 988888776543
No 71
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=88.09 E-value=10 Score=31.52 Aligned_cols=195 Identities=11% Similarity=0.042 Sum_probs=94.5
Q ss_pred EecCcEEEE-ecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 107 SSSKGLLCF-SLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 107 ~s~~Gll~~-~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
...+|-+++ .....+.+.++|+.++....++.... .....++++..+ ++++... ...+.+|+..++.-....
T Consensus 31 ~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g---~l~v~~~---~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 31 VDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAG---TVYVTDF---NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp ECTTCCEEEEECSSSCEEEEECC-----EECCCCSC-CSCCCEEECTTC---CEEEEET---TTEEEEECTTCSCCEECC
T ss_pred ECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCc-CCcceeEECCCC---CEEEEcC---CCEEEEEeCCCceEeeee
Confidence 344565555 43345788899988777555442211 112345554332 3554432 457888988765433322
Q ss_pred cCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEE
Q 017381 186 IDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~ 263 (372)
... . ....++.+ +|.+|+.......|..||..+......... .......+... -+|+||
T Consensus 104 ---~~~--~---~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~p~~i~~~--~~g~l~ 164 (270)
T 1rwi_B 104 ---FDG--L---NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT---------GLNDPDGVAVD--NSGNVY 164 (270)
T ss_dssp ---CCS--C---SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC---------SCCSCCCEEEC--TTCCEE
T ss_pred ---cCC--c---CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc---------cCCCceeEEEe--CCCCEE
Confidence 010 0 11123444 578887765555788888765443321101 10011233322 478888
Q ss_pred EEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCceE
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
+.... ...+.+| +..+.-....... . + ....-.++..++.+|+.....+.|..||+.++.-.
T Consensus 165 v~~~~-----~~~i~~~--~~~~~~~~~~~~~-~----~------~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~ 226 (270)
T 1rwi_B 165 VTDTD-----NNRVVKL--EAESNNQVVLPFT-D----I------TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST 226 (270)
T ss_dssp EEEGG-----GTEEEEE--CTTTCCEEECCCS-S----C------CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE
T ss_pred EEECC-----CCEEEEE--ecCCCceEeeccc-C----C------CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce
Confidence 87641 2345555 4443311111100 0 0 00111233345578888766678999999887655
Q ss_pred EC
Q 017381 344 WL 345 (372)
Q Consensus 344 ~v 345 (372)
..
T Consensus 227 ~~ 228 (270)
T 1rwi_B 227 VL 228 (270)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=88.07 E-value=13 Score=32.52 Aligned_cols=99 Identities=6% Similarity=-0.036 Sum_probs=51.0
Q ss_pred CCceEEEEeccccceeccCCCC-CCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccC
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~-~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (372)
.++.+.+||..++++..+..+. .......+.+.+.+ +.++.++ ....+.+||..++.+.... .... ..
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~~~~--~dg~i~vwd~~~~~~~~~~--~~~~----~~ 96 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS---NRIVTCG--TDRNAYVWTLKGRTWKPTL--VILR----IN 96 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTT---TEEEEEE--TTSCEEEEEEETTEEEEEE--ECCC----CS
T ss_pred CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCC---CEEEEEc--CCCeEEEEECCCCeeeeeE--Eeec----CC
Confidence 3578999999988644333221 11122344454422 2333333 2357889998888765443 1111 00
Q ss_pred CCcccEEE--CCEEEEeeeCCcEEEEEecCCCe
Q 017381 198 SHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI 228 (372)
Q Consensus 198 ~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~ 228 (372)
.....+.+ +|...+.+.....+..||+.+.+
T Consensus 97 ~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~ 129 (372)
T 1k8k_C 97 RAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 129 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTSSEEEEEEETTT
T ss_pred CceeEEEECCCCCEEEEEeCCCEEEEEEecCCC
Confidence 11112222 46555556555568888876543
No 73
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=87.69 E-value=16 Score=33.22 Aligned_cols=186 Identities=12% Similarity=0.071 Sum_probs=95.5
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCc
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQ 200 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~ 200 (372)
..+++||..+++...+...+. ....+.+.+. .-+++..........+++||..++..+.+. ..+. ..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--~~~~~~~spd--g~~la~~~~~~g~~~i~~~d~~~~~~~~l~--~~~~-------~~ 269 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--HNGAPAFSPD--GSKLAFALSKTGSLNLYVMDLASGQIRQVT--DGRS-------NN 269 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--CEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCCEEECC--CCSS-------CE
T ss_pred cEEEEEECCCCcEEEeecCCC--cccCEEEcCC--CCEEEEEEecCCCceEEEEECCCCCEEeCc--CCCC-------cc
Confidence 489999999998776653321 1223344333 224554544444567999999888765554 2111 11
Q ss_pred ccEEE--CCE-EEEeeeC--CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccc
Q 017381 201 EGVFY--KGS-LYFTTPE--PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGIST 275 (372)
Q Consensus 201 ~~v~~--~G~-~y~~~~~--~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~ 275 (372)
..+.. +|. +++.... ...|..+|+.+.+...+. ..........+ . -+|+..++.... ....
T Consensus 270 ~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~---------~~~~~~~~~~~-s--pdG~~l~~~~~~--~g~~ 335 (415)
T 2hqs_A 270 TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT---------WEGSQNQDADV-S--SDGKFMVMVSSN--GGQQ 335 (415)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC---------CSSSEEEEEEE-C--TTSSEEEEEEEC--SSCE
T ss_pred cceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe---------cCCCcccCeEE-C--CCCCEEEEEECc--CCce
Confidence 12222 564 4444432 236888898876644432 11111111122 2 577755554421 1124
Q ss_pred eEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCC--eEEEEECCCCceEECCCC
Q 017381 276 TMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWP--EILYYNVARRTWHWLPSC 348 (372)
Q Consensus 276 ~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~--~v~~yd~~~~~w~~v~~~ 348 (372)
.+.+|.++ .+....+..-. . .....+. ++..|++.....+ .|..+|+.++..+.++..
T Consensus 336 ~i~~~d~~-~~~~~~l~~~~--------~------~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~ 396 (415)
T 2hqs_A 336 HIAKQDLA-TGGVQVLSSTF--------L------DETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPAT 396 (415)
T ss_dssp EEEEEETT-TCCEEECCCSS--------S------CEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCS
T ss_pred EEEEEECC-CCCEEEecCCC--------C------cCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCC
Confidence 56666653 23343221110 0 1122333 4455666554433 699999998888887654
No 74
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=87.36 E-value=16 Score=36.15 Aligned_cols=197 Identities=13% Similarity=-0.002 Sum_probs=94.8
Q ss_pred EecCcEEEEecCCCceEEEEeccc----cceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVT----LSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWS 182 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t----~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~ 182 (372)
...+|.|++.....+.+.++++.+ .....+-.... ....+++++...+ +|++... ....+.+++..+..=+
T Consensus 414 d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~-~~P~glavD~~~g--~LY~tD~--~~~~I~v~d~dg~~~~ 488 (699)
T 1n7d_A 414 EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-QAPDGLAVDWIHS--NIYWTDS--VLGTVSVADTKGVKRK 488 (699)
T ss_dssp ETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC---CCCEECCCSSS--BCEECCT--TTSCEEEEBSSSCCEE
T ss_pred ccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC-CCcceEEEEeeCC--cEEEEec--cCCeEEEEecCCCceE
Confidence 445677777665556788888875 12111111000 0112444442222 4555421 2346788887654322
Q ss_pred ccccCCCCccccccCCCcccEEE---CCEEEEeeeCC-cEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccC
Q 017381 183 KFDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEE 258 (372)
Q Consensus 183 ~~~~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~-~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~ 258 (372)
.+. .. .+ ....++++ +|.+||..... ..|..+++....-..+...+ ...|.+ |+.. ..
T Consensus 489 ~l~--~~---~~---~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~----l~~PnG-----lavd-~~ 550 (699)
T 1n7d_A 489 TLF--RE---QG---SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN----IQWPNG-----ITLD-LL 550 (699)
T ss_dssp EEC--CC---SS---CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSS----CSSCCC-----EEEC-TT
T ss_pred EEE--eC---CC---CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCC----CCCccE-----EEEe-cc
Confidence 221 10 01 11235555 58999987543 46888887643222211000 002333 3321 13
Q ss_pred CCeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEEC
Q 017381 259 SNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNV 337 (372)
Q Consensus 259 ~g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~ 337 (372)
+++||++... ...|.++.+ ++. -..+...+.. +. ........++.||+.....+.|..+|.
T Consensus 551 ~~~LY~aD~~-----~~~I~~~d~--dG~~~~~~~~~~~~-----~~------~P~glavd~~~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 551 SGRLYWVDSK-----LHSISSIDV--NGGNRKTILEDEKR-----LA------HPFSLAVFEDKVFWTDIINEAIFSANR 612 (699)
T ss_dssp TCCEEEEETT-----TTEEEEECS--SSSCCEEECCCSSS-----CS------SCCCCEEETTEEEEECSTTTCEEEEET
T ss_pred CCEEEEEecC-----CCeEEEEcc--CCCceEEEEecCCc-----CC------CceEeEEECCEEEEEeCCCCeEEEEEc
Confidence 5889998742 345555544 333 2222221100 00 111122245688988876778999999
Q ss_pred CCCceEE
Q 017381 338 ARRTWHW 344 (372)
Q Consensus 338 ~~~~w~~ 344 (372)
.+++-..
T Consensus 613 ~~G~~~~ 619 (699)
T 1n7d_A 613 LTGSDVN 619 (699)
T ss_dssp TTEEEEE
T ss_pred cCCCceE
Confidence 8776544
No 75
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=87.08 E-value=17 Score=32.77 Aligned_cols=106 Identities=13% Similarity=-0.010 Sum_probs=54.8
Q ss_pred EEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecC-----CCceEEEEECCCCCcccccc
Q 017381 112 LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS-----FPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 112 ll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~-----~~~~~~vy~s~~~~W~~~~~ 186 (372)
.+++....++.+.+||+.+++....-+.. .....+.+.+.+ . .++...... ....+.+||..+++-....
T Consensus 225 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g-~-~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~- 299 (433)
T 3bws_A 225 LVYCSNWISEDISVIDRKTKLEIRKTDKI--GLPRGLLLSKDG-K-ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI- 299 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECCCC--SEEEEEEECTTS-S-EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-
T ss_pred EEEEEecCCCcEEEEECCCCcEEEEecCC--CCceEEEEcCCC-C-EEEEEECCCCccccCCCeEEEEECCCCcEEeec-
Confidence 45444434578999999888754332221 112233333322 2 344333221 2358899999876432221
Q ss_pred CCCCccccccCCCcccEEE--CC-EEEEeeeCCcEEEEEecCCCeee
Q 017381 187 DGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLENGIWE 230 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G-~~y~~~~~~~~i~~yD~~~~~w~ 230 (372)
..+ .....+.+ +| .+|+.+.....+..||+.+.+..
T Consensus 300 -~~~-------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 300 -GPP-------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ 338 (433)
T ss_dssp -EEE-------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred -cCC-------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE
Confidence 000 01112233 35 56766666668999999876543
No 76
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=86.94 E-value=17 Score=32.62 Aligned_cols=135 Identities=10% Similarity=0.051 Sum_probs=70.9
Q ss_pred CceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCC
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSH 199 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~ 199 (372)
++.+.+||..+++...+-..........+++.+.+ +.++++. ....+.+||..++.-...- .. ....
T Consensus 112 d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~---~~l~~~~--~dg~i~iwd~~~~~~~~~~----~~----~~~~ 178 (401)
T 4aez_A 112 ERNVYVWNADSGSVSALAETDESTYVASVKWSHDG---SFLSVGL--GNGLVDIYDVESQTKLRTM----AG----HQAR 178 (401)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTS---SEEEEEE--TTSCEEEEETTTCCEEEEE----CC----CSSC
T ss_pred CCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCC---CEEEEEC--CCCeEEEEECcCCeEEEEe----cC----CCCc
Confidence 57899999999987655433222222344443322 2344443 2357889998876432211 11 1112
Q ss_pred cccEEECCEEEEeeeCCcEEEEEecCCCee--eccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceE
Q 017381 200 QEGVFYKGSLYFTTPEPFSIVRFDLENGIW--ETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (372)
Q Consensus 200 ~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w--~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i 277 (372)
...+..++...+.++....|..+|+.+..- ..+. . ..... ..+... -+|++++++.. ...+
T Consensus 179 v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~-------~~~~v--~~~~~~--~~~~~l~s~~~-----d~~v 241 (401)
T 4aez_A 179 VGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQ-G-------HSSEV--CGLAWR--SDGLQLASGGN-----DNVV 241 (401)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE-C-------CSSCE--EEEEEC--TTSSEEEEEET-----TSCE
T ss_pred eEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEc-C-------CCCCe--eEEEEc--CCCCEEEEEeC-----CCeE
Confidence 224445777666676667899999874321 1111 0 11111 122211 36777776652 3578
Q ss_pred EEEEEcC
Q 017381 278 KLWELGC 284 (372)
Q Consensus 278 ~vw~l~~ 284 (372)
.+|.+..
T Consensus 242 ~iwd~~~ 248 (401)
T 4aez_A 242 QIWDARS 248 (401)
T ss_dssp EEEETTC
T ss_pred EEccCCC
Confidence 9998753
No 77
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=86.83 E-value=16 Score=32.29 Aligned_cols=25 Identities=12% Similarity=0.060 Sum_probs=16.6
Q ss_pred CCEEEEEeecCCeEEEEECCCCceE
Q 017381 319 QGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 319 ~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
++..++.+...+.+.+||+.+++-.
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENT 280 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBC
T ss_pred CCCEEEEecCCCeEEEEECCCCccc
Confidence 3444444545678999999987643
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=86.72 E-value=15 Score=31.87 Aligned_cols=66 Identities=12% Similarity=-0.019 Sum_probs=32.7
Q ss_pred CcEEEEecCCCceEEEEeccccceeccC-CCC-CCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC
Q 017381 110 KGLLCFSLPSSSSFLVCNLVTLSSRTID-FPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS 180 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~~~~lP-~~~-~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~ 180 (372)
+|-+++.+..++.+.+||..+++....- ... .......+.+.+. .-.++ .++ ....+.+||..++.
T Consensus 127 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~-~~~--~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 127 DPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL--GEKIM-SCG--MDHSLKLWRINSKR 194 (366)
T ss_dssp CTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT--SSEEE-EEE--TTSCEEEEESCSHH
T ss_pred CCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC--CCEEE-Eec--CCCCEEEEECCCCc
Confidence 4433333334578999999887754332 111 1111223334332 22333 333 23578899988654
No 79
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=86.67 E-value=22 Score=33.79 Aligned_cols=211 Identities=10% Similarity=0.030 Sum_probs=96.3
Q ss_pred cEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCC
Q 017381 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFP 190 (372)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p 190 (372)
+.+++.....+.+.++|..+.+...+...+.......+++++.+ .| +++... ....+.++|..+++=... ++
T Consensus 292 ~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg-~~-l~va~~--~~~~v~v~D~~tg~l~~~----i~ 363 (543)
T 1nir_A 292 PEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSH-RY-FMTAAN--NSNKVAVIDSKDRRLSAL----VD 363 (543)
T ss_dssp SEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTS-CE-EEEEEG--GGTEEEEEETTTTEEEEE----EE
T ss_pred CEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCC-CE-EEEEec--CCCeEEEEECCCCeEEEe----ec
Confidence 34444444467899999877653221111111122345565433 23 333322 235788899998753221 11
Q ss_pred ccccccCCCcccEEE--C-CEEEEeee-CCcEEEEEecCCC-----eeeccCC-CCccccccCCCcccccceeeeccCCC
Q 017381 191 SMILSQSSHQEGVFY--K-GSLYFTTP-EPFSIVRFDLENG-----IWETPND-ANDHMTMMLPHELTFFRLVNDGEESN 260 (372)
Q Consensus 191 ~~~~~~~~~~~~v~~--~-G~~y~~~~-~~~~i~~yD~~~~-----~w~~i~~-p~~~~~~~~p~~~~~~~lv~e~~~~g 260 (372)
.+..++.. ....+. + |.+|..+. ....|..+|+.++ .|+.+.. + .+... ...+..- -+|
T Consensus 364 ~g~~ph~g-~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~-------~~g~~-~~~v~~~--pdg 432 (543)
T 1nir_A 364 VGKTPHPG-RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-------GQGGG-SLFIKTH--PKS 432 (543)
T ss_dssp CSSSBCCT-TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE-------CSCSC-CCCEECC--TTC
T ss_pred cCCCCCCC-CCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE-------cCCCC-ceEEEcC--CCC
Confidence 10111100 111222 3 56665543 3467999998773 2554320 1 11111 0112111 356
Q ss_pred eEEEEEeeecCC--ccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCce-EEEE-eeCCEEEEEee----cCCeE
Q 017381 261 KLYLIGGVGRNG--ISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDH-VYCF-WHQGMICVCCY----TWPEI 332 (372)
Q Consensus 261 ~L~vv~~~~~~~--~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~-~~~~-~~~~~i~~~~~----~~~~v 332 (372)
+...++...... ...+|.||..+....= ...||..-...... ..... -..+ -+|+.+++... ..+.|
T Consensus 433 ~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~--~~~~~v~~~~~~~~---~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i 507 (543)
T 1nir_A 433 SHLYVDTTFNPDARISQSVAVFDLKNLDAK--YQVLPIAEWADLGE---GAKRVVQPEYNKRGDEVWFSVWNGKNDSSAL 507 (543)
T ss_dssp CEEEECCTTCSSHHHHTCEEEEETTCTTSC--CEEECHHHHHCCCS---SCCEEEEEEECSSSSEEEEEEECCTTSCCEE
T ss_pred CcEEEecCCCCCcccCceEEEEECCCCCCC--eEEeechhhcccCC---CCCceEeccCCCCCCEEEEEeecCCCCCCeE
Confidence 544443211000 2468999987643321 12333221111100 00111 1122 35677887743 24679
Q ss_pred EEEECCCCceEEC
Q 017381 333 LYYNVARRTWHWL 345 (372)
Q Consensus 333 ~~yd~~~~~w~~v 345 (372)
.+||.+|.+..+.
T Consensus 508 ~v~D~~t~~~~~~ 520 (543)
T 1nir_A 508 VVVDDKTLKLKAV 520 (543)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCceEEEe
Confidence 9999999987664
No 80
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.23 E-value=18 Score=32.15 Aligned_cols=192 Identities=9% Similarity=0.070 Sum_probs=92.2
Q ss_pred cCcEEEEecCCCceEEEEeccccceeccCCCCCC-------CCc--eeEEEEeCCCCEEEEEEeecCCCceEEEEECCCC
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYP-------FDF--ELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ 179 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~-------~~~--~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~ 179 (372)
.+|.+++... .+.++.+|+.|++...--..+.. ... .....+. . +|++.. ....+..+|.+++
T Consensus 52 ~~~~v~~~~~-~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~v~v~~---~~g~l~a~d~~tG 123 (376)
T 3q7m_A 52 ADNVVYAADR-AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG---G-HVYIGS---EKAQVYALNTSDG 123 (376)
T ss_dssp ETTEEEEECT-TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET---T-EEEEEE---TTSEEEEEETTTC
T ss_pred ECCEEEEEcC-CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC---C-EEEEEc---CCCEEEEEECCCC
Confidence 4666665542 46888999998884322111110 011 1112211 1 455433 2357889998877
Q ss_pred C--ccccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCC--eeeccCCCCccccccCCCc--c-cccce
Q 017381 180 S--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTMMLPHE--L-TFFRL 252 (372)
Q Consensus 180 ~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~--~w~~i~~p~~~~~~~~p~~--~-~~~~l 252 (372)
+ |+... . . .....++..+|.+|+.+.+ ..+.+||..+. .|+.-. + .+.. . ....+
T Consensus 124 ~~~W~~~~--~--~-----~~~~~p~~~~~~v~v~~~~-g~l~~~d~~tG~~~W~~~~-~-------~~~~~~~~~~~~~ 185 (376)
T 3q7m_A 124 TVAWQTKV--A--G-----EALSRPVVSDGLVLIHTSN-GQLQALNEADGAVKWTVNL-D-------MPSLSLRGESAPT 185 (376)
T ss_dssp CEEEEEEC--S--S-----CCCSCCEEETTEEEEECTT-SEEEEEETTTCCEEEEEEC-C-------C-----CCCCCCE
T ss_pred CEEEEEeC--C--C-----ceEcCCEEECCEEEEEcCC-CeEEEEECCCCcEEEEEeC-C-------CCceeecCCCCcE
Confidence 5 76543 1 1 1223456778888865543 46999998765 466521 1 1110 0 11222
Q ss_pred eeeccCCCeEEEEEeeecCCccceEEEEEEcCCCC--EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCC
Q 017381 253 VNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWP 330 (372)
Q Consensus 253 v~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 330 (372)
+ .+|.+++... ...+..+... .++ |+.-...+.... ...... ..... .+..++.||+... .+
T Consensus 186 ~----~~~~v~~g~~------~g~l~~~d~~-tG~~~w~~~~~~~~~~~-~~~~~~--~~~~~-p~~~~~~v~~~~~-~g 249 (376)
T 3q7m_A 186 T----AFGAAVVGGD------NGRVSAVLME-QGQMIWQQRISQATGST-EIDRLS--DVDTT-PVVVNGVVFALAY-NG 249 (376)
T ss_dssp E----ETTEEEECCT------TTEEEEEETT-TCCEEEEEECCC--------------CCCCC-CEEETTEEEEECT-TS
T ss_pred E----ECCEEEEEcC------CCEEEEEECC-CCcEEEEEecccCCCCc-cccccc--ccCCC-cEEECCEEEEEec-Cc
Confidence 2 4666655321 1233333332 233 875433221110 000000 00011 1234777888753 46
Q ss_pred eEEEEECCCCce
Q 017381 331 EILYYNVARRTW 342 (372)
Q Consensus 331 ~v~~yd~~~~~w 342 (372)
.+.++|+++++-
T Consensus 250 ~l~~~d~~tG~~ 261 (376)
T 3q7m_A 250 NLTALDLRSGQI 261 (376)
T ss_dssp CEEEEETTTCCE
T ss_pred EEEEEECCCCcE
Confidence 799999998843
No 81
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=86.13 E-value=29 Score=34.56 Aligned_cols=199 Identities=11% Similarity=0.082 Sum_probs=102.7
Q ss_pred cCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCC
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG 188 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~ 188 (372)
.+|-|.+.. ..+.++.+||.++++..++...... ....++...... ++.+ +.. ..+.+|+..++.|+... .
T Consensus 416 ~~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~~~-~~v~~i~~d~~g-~lwi-gt~---~Gl~~~~~~~~~~~~~~--~ 486 (781)
T 3v9f_A 416 SEGNLWFGT-YLGNISYYNTRLKKFQIIELEKNEL-LDVRVFYEDKNK-KIWI-GTH---AGVFVIDLASKKVIHHY--D 486 (781)
T ss_dssp TTSCEEEEE-TTEEEEEECSSSCEEEECCSTTTCC-CCEEEEEECTTS-EEEE-EET---TEEEEEESSSSSCCEEE--C
T ss_pred CCCCEEEEe-ccCCEEEEcCCCCcEEEeccCCCCC-CeEEEEEECCCC-CEEE-EEC---CceEEEeCCCCeEEecc--c
Confidence 355444432 2357889999999888776431111 111222222222 3333 221 46889999999887665 2
Q ss_pred CCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEE
Q 017381 189 FPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIG 266 (372)
Q Consensus 189 ~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~ 266 (372)
.+...... .....++. +|.+ |++.....+..||+.++++..+..+.. +|.... ..+..+ .+|.|++..
T Consensus 487 ~~~~~~~~-~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~-----l~~~~i-~~i~~d--~~g~lWi~T 556 (781)
T 3v9f_A 487 TSNSQLLE-NFVRSIAQDSEGRF-WIGTFGGGVGIYTPDMQLVRKFNQYEG-----FCSNTI-NQIYRS--SKGQMWLAT 556 (781)
T ss_dssp TTTSSCSC-SCEEEEEECTTCCE-EEEESSSCEEEECTTCCEEEEECTTTT-----CSCSCE-EEEEEC--TTSCEEEEE
T ss_pred Cccccccc-ceeEEEEEcCCCCE-EEEEcCCCEEEEeCCCCeEEEccCCCC-----CCCCee-EEEEEC--CCCCEEEEE
Confidence 22101111 11123333 4565 455443458999999888876542200 333221 233323 578888865
Q ss_pred eeecCCccceEEE-EEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCceEE
Q 017381 267 GVGRNGISTTMKL-WELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 267 ~~~~~~~~~~i~v-w~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
. . .+ +.++..+. ++....- .-+... ... ..+...++.|++.. .+.+..||+++++++.
T Consensus 557 ~-------~--Glv~~~d~~~~~~~~~~~~------~gl~~~--~i~-~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~ 616 (781)
T 3v9f_A 557 G-------E--GLVCFPSARNFDYQVFQRK------EGLPNT--HIR-AISEDKNGNIWAST--NTGISCYITSKKCFYT 616 (781)
T ss_dssp T-------T--EEEEESCTTTCCCEEECGG------GTCSCC--CCC-EEEECSSSCEEEEC--SSCEEEEETTTTEEEE
T ss_pred C-------C--CceEEECCCCCcEEEcccc------CCCCCc--eEE-EEEECCCCCEEEEc--CCceEEEECCCCceEE
Confidence 3 1 24 66665543 5544321 001000 011 11223456788876 4579999999998877
Q ss_pred CC
Q 017381 345 LP 346 (372)
Q Consensus 345 v~ 346 (372)
..
T Consensus 617 ~~ 618 (781)
T 3v9f_A 617 YD 618 (781)
T ss_dssp EC
T ss_pred ec
Confidence 54
No 82
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=84.80 E-value=18 Score=31.16 Aligned_cols=114 Identities=12% Similarity=0.124 Sum_probs=54.9
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCC-CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~-~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
+.+|-.++.+..++.+.+||..+++...+..+.. ......+++.+.... ++++.++ .+..+.+||..++.|....
T Consensus 22 s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s--~D~~v~iWd~~~~~~~~~~- 97 (316)
T 3bg1_A 22 DYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYG-NILASCS--YDRKVIIWREENGTWEKSH- 97 (316)
T ss_dssp CGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGS-SCEEEEE--TTSCEEEECCSSSCCCEEE-
T ss_pred cCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCC-CEEEEEE--CCCEEEEEECCCCcceEEE-
Confidence 3445333333345788999988765332221110 111123333221111 2333333 3357889999988886543
Q ss_pred CCCCccccccCCCcccEEE--C--CEEEEeeeCCcEEEEEecCCC-eee
Q 017381 187 DGFPSMILSQSSHQEGVFY--K--GSLYFTTPEPFSIVRFDLENG-IWE 230 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~--G~~y~~~~~~~~i~~yD~~~~-~w~ 230 (372)
.+.. ....-..+.+ + |.+...+.....|..+|+.+. .|.
T Consensus 98 -~~~~----h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 98 -EHAG----HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp -EECC----CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE
T ss_pred -EccC----CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc
Confidence 1111 1111223333 2 555555555556888888765 454
No 83
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=84.43 E-value=0.99 Score=26.78 Aligned_cols=27 Identities=22% Similarity=0.450 Sum_probs=22.0
Q ss_pred CCCCChhhhcCCCHHHHHHHHccCCch
Q 017381 5 RREMDPAIWSRLPEDLLDHVLSFLPPK 31 (372)
Q Consensus 5 ~~~~~~~~~~~LP~dll~~IL~rLp~~ 31 (372)
++-.|++-++.||.|+..+||+.-...
T Consensus 13 P~~VD~eVF~~LP~dIQ~Ells~~~~e 39 (48)
T 2kwv_A 13 PEGVDQEVFKQLPADIQEEILSGKSRE 39 (48)
T ss_dssp CTTCCGGGTTTSCHHHHHHHTTCCCSC
T ss_pred CCCCCHHHHHHCcHHHHHHHHhcchHH
Confidence 345889999999999999999876533
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=84.28 E-value=19 Score=30.79 Aligned_cols=190 Identities=11% Similarity=0.051 Sum_probs=91.5
Q ss_pred ecCc-EEEEecCCCceEEEEeccccceeccCCCCCC-CCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 108 SSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYP-FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~-~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
+.+| +++... .++.+.+||..+++.......... .....+.+.+. . +.++.++ ....+.+||..+++-...-
T Consensus 106 ~~~~~~l~~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~~l~~~~--~dg~v~~~d~~~~~~~~~~ 179 (337)
T 1gxr_A 106 LPDGCTLIVGG-EASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD--S-KVCFSCC--SDGNIAVWDLHNQTLVRQF 179 (337)
T ss_dssp CTTSSEEEEEE-SSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTT--S-SEEEEEE--TTSCEEEEETTTTEEEEEE
T ss_pred cCCCCEEEEEc-CCCcEEEEECCCCCcceeeecccCCCceEEEEECCC--C-CEEEEEe--CCCcEEEEeCCCCceeeee
Confidence 4455 343333 357899999988774333222111 11123333322 2 2333333 2356889998876432211
Q ss_pred cCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEE
Q 017381 186 IDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~ 263 (372)
.. .......+.+ +|...+.+.....+..||+.+.+-.... . .+........ . -+|+++
T Consensus 180 ----~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~-------~~~~v~~~~~--s--~~~~~l 239 (337)
T 1gxr_A 180 ----QG----HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH-D-------FTSQIFSLGY--C--PTGEWL 239 (337)
T ss_dssp ----CC----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-E-------CSSCEEEEEE--C--TTSSEE
T ss_pred ----ec----ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee-c-------CCCceEEEEE--C--CCCCEE
Confidence 10 0011122333 5666666666667999999876543221 1 2222211122 1 467776
Q ss_pred EEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEEEEEeecCCeEEEEECCCCc
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (372)
+++.. ...+.+|.++........ . ....+..+ ..++..++.....+.+.+||+++++
T Consensus 240 ~~~~~-----~~~i~~~~~~~~~~~~~~-~---------------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 240 AVGME-----SSNVEVLHVNKPDKYQLH-L---------------HESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp EEEET-----TSCEEEEETTSSCEEEEC-C---------------CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEcC-----CCcEEEEECCCCCeEEEc-C---------------CccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 66541 356889987543222110 0 00112222 2234444455456789999999886
Q ss_pred eEE
Q 017381 342 WHW 344 (372)
Q Consensus 342 w~~ 344 (372)
-..
T Consensus 299 ~~~ 301 (337)
T 1gxr_A 299 SIF 301 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 553
No 85
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=84.07 E-value=24 Score=31.83 Aligned_cols=191 Identities=12% Similarity=0.036 Sum_probs=99.8
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
..+|.|++.....+.+..+++.++....+...... ...+++++...+ +|++... ....+++++.....-+.+.
T Consensus 125 ~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~g--~lY~~d~--~~~~I~~~~~dg~~~~~l~-- 197 (386)
T 3v65_B 125 HRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVHD--KLYWTDS--GTSRIEVANLDGAHRKVLL-- 197 (386)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS-CCCCEEEETTTT--EEEEEET--TTTEEEECBTTSCSCEEEE--
T ss_pred cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC-CccEEEEEeCCC--eEEEEcC--CCCeEEEEeCCCCceEEee--
Confidence 45677777765567899999988765544322111 123566664333 5666543 2347777777544322221
Q ss_pred CCCccccccCCCcccEEE---CCEEEEeeeCC-cEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEE
Q 017381 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~-~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~ 263 (372)
. . .+ ..-.++.+ +|.+||..... ..|..+|+....-..+...+ ...|.+ |... ..+++||
T Consensus 198 ~--~-~l---~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~----~~~PnG-----lavd-~~~~~lY 261 (386)
T 3v65_B 198 W--Q-SL---EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH----LFWPNG-----LTID-YAGRRMY 261 (386)
T ss_dssp C--S-SC---SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS----CSCEEE-----EEEE-GGGTEEE
T ss_pred c--C-CC---CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC----CCCeee-----EEEe-CCCCEEE
Confidence 0 0 01 11234444 58999987655 67999998754332221010 002332 3311 1378899
Q ss_pred EEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCc
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (372)
++... ...|.++ +.++. -..+..-. + ......+..++.||+.....+.|..+|..+++
T Consensus 262 ~aD~~-----~~~I~~~--d~dG~~~~~~~~~~-------~------~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 262 WVDAK-----HHVIERA--NLDGSHRKAVISQG-------L------PHPFAITVFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp EEETT-----TTEEEEE--CTTSCSCEEEECSS-------C------SSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEECC-----CCEEEEE--eCCCCeeEEEEECC-------C------CCceEEEEECCEEEEeeCCCCeEEEEECCCCc
Confidence 98652 2344444 44443 22221110 0 01122223677899988777789999965553
No 86
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=83.98 E-value=25 Score=31.94 Aligned_cols=189 Identities=10% Similarity=0.062 Sum_probs=94.7
Q ss_pred eEEEEecCcEEEEecCCCceEEEEeccccceec-cCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCc
Q 017381 103 ATLLSSSKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (372)
Q Consensus 103 ~~~~~s~~Gll~~~~~~~~~~~v~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W 181 (372)
...+...+.+++... .++.+.+||..+++... +..- ......+.+.. . . ++.++ ....+.+||..++.-
T Consensus 162 v~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~h--~~~v~~~~~~~---~-~-l~s~s--~dg~i~~wd~~~~~~ 231 (445)
T 2ovr_B 162 VWSSQMRDNIIISGS-TDRTLKVWNAETGECIHTLYGH--TSTVRCMHLHE---K-R-VVSGS--RDATLRVWDIETGQC 231 (445)
T ss_dssp EEEEEEETTEEEEEE-TTSCEEEEETTTTEEEEEECCC--SSCEEEEEEET---T-E-EEEEE--TTSEEEEEESSSCCE
T ss_pred EEEEEecCCEEEEEe-CCCeEEEEECCcCcEEEEECCC--CCcEEEEEecC---C-E-EEEEe--CCCEEEEEECCCCcE
Confidence 333333455544433 46789999998886432 2211 11112333321 2 2 33332 346788999887542
Q ss_pred cccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe
Q 017381 182 SKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (372)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~ 261 (372)
...- .. .......+..+|...+.+.....+..||+.+.+..... . . .......+. .+|.
T Consensus 232 ~~~~----~~----~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~-------~-~~~~v~~~~----~~~~ 290 (445)
T 2ovr_B 232 LHVL----MG----HVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL-Q-------G-HTNRVYSLQ----FDGI 290 (445)
T ss_dssp EEEE----EC----CSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEE-C-------C-CSSCEEEEE----ECSS
T ss_pred EEEE----cC----CcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEe-c-------C-CCCceEEEE----ECCC
Confidence 1111 00 11122345558877777776667999998776543211 0 0 111112222 5677
Q ss_pred EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE-eeCCEEEEEeecCCeEEEEECCCC
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNVARR 340 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~v~~yd~~~~ 340 (372)
.++++.. ...+.+|.+..... +..+.. ....+.++ ..++. ++.+...+.|.+||++++
T Consensus 291 ~l~~~~~-----d~~i~i~d~~~~~~---~~~~~~------------~~~~v~~~~~~~~~-l~~~~~dg~i~vwd~~~~ 349 (445)
T 2ovr_B 291 HVVSGSL-----DTSIRVWDVETGNC---IHTLTG------------HQSLTSGMELKDNI-LVSGNADSTVKIWDIKTG 349 (445)
T ss_dssp EEEEEET-----TSCEEEEETTTCCE---EEEECC------------CCSCEEEEEEETTE-EEEEETTSCEEEEETTTC
T ss_pred EEEEEeC-----CCeEEEEECCCCCE---EEEEcC------------CcccEEEEEEeCCE-EEEEeCCCeEEEEECCCC
Confidence 6666542 35789998753222 222210 01122333 34554 444445678999999887
Q ss_pred ceE
Q 017381 341 TWH 343 (372)
Q Consensus 341 ~w~ 343 (372)
+-.
T Consensus 350 ~~~ 352 (445)
T 2ovr_B 350 QCL 352 (445)
T ss_dssp CEE
T ss_pred cEE
Confidence 543
No 87
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=83.52 E-value=26 Score=31.88 Aligned_cols=105 Identities=15% Similarity=0.163 Sum_probs=57.2
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCC
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (372)
+|...+.+.....|..||+.+.+-.... .........+. .+++.++.+.. ...+.+|.+...
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~----------~~h~~~v~~~~---~~~~~l~s~s~-----dg~v~vwd~~~~ 382 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELMYTL----------QGHTALVGLLR---LSDKFLVSAAA-----DGSIRGWDANDY 382 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEE----------CCCSSCEEEEE---ECSSEEEEEET-----TSEEEEEETTTC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEE----------eCCCCcEEEEE---EcCCEEEEEeC-----CCcEEEEECCCC
Confidence 4555555665567999999876543221 11111112232 45666555541 357999988643
Q ss_pred CC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCceEE
Q 017381 286 GN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 286 ~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
.. +..... ......++..++.+++.+. .+.|.+||+++++...
T Consensus 383 ~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 383 SRKFSYHHT---------------NLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp CEEEEEECT---------------TCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred ceeeeecCC---------------CCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 32 322110 1122334444554555544 5789999999998765
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=82.86 E-value=27 Score=31.60 Aligned_cols=93 Identities=11% Similarity=0.183 Sum_probs=48.7
Q ss_pred ceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCccc
Q 017381 169 NYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELT 248 (372)
Q Consensus 169 ~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~ 248 (372)
..+.+||..++.-...- .. ....-..+..+|.+.+.++....|..+|+.+.+..... . .....
T Consensus 153 g~i~iwd~~~~~~~~~~----~~----h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~--------~h~~~ 215 (435)
T 1p22_A 153 NTIKIWDKNTLECKRIL----TG----HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL-I--------HHCEA 215 (435)
T ss_dssp SCEEEEESSSCCEEEEE----CC----CSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEE-C--------CCCSC
T ss_pred CeEEEEeCCCCeEEEEE----cC----CCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEE-c--------CCCCc
Confidence 56788888765422111 11 11112244457877777776667999999876543221 0 11111
Q ss_pred ccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCC
Q 017381 249 FFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN 287 (372)
Q Consensus 249 ~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~ 287 (372)
...+. .++.+++.+. ....+.+|.+.....
T Consensus 216 v~~l~----~~~~~l~s~s-----~dg~i~vwd~~~~~~ 245 (435)
T 1p22_A 216 VLHLR----FNNGMMVTCS-----KDRSIAVWDMASPTD 245 (435)
T ss_dssp EEEEE----CCTTEEEEEE-----TTSCEEEEECSSSSC
T ss_pred EEEEE----EcCCEEEEee-----CCCcEEEEeCCCCCC
Confidence 12222 4555555544 135788998764433
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=82.48 E-value=23 Score=30.53 Aligned_cols=98 Identities=6% Similarity=-0.090 Sum_probs=48.6
Q ss_pred CCceEEEEeccccc--eeccCCCCC--CCCceeEEEEe-CCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccc
Q 017381 119 SSSSFLVCNLVTLS--SRTIDFPTY--PFDFELLTLVS-TPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMI 193 (372)
Q Consensus 119 ~~~~~~v~NP~t~~--~~~lP~~~~--~~~~~~~~~~~-~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~ 193 (372)
.++.+.+||..+++ ...+..... ......+.+.. -..+.+.++.++ ....+.+||..++.=.... ...
T Consensus 137 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~--~~~--- 209 (357)
T 3i2n_A 137 RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY--DNGDIKLFDLRNMALRWET--NIK--- 209 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE--TTSEEEEEETTTTEEEEEE--ECS---
T ss_pred CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc--cCCeEEEEECccCceeeec--CCC---
Confidence 45789999998876 333332221 11222333221 111223444443 2357899998876532111 111
Q ss_pred cccCCCcccEEE-----CCEEEEeeeCCcEEEEEecCCC
Q 017381 194 LSQSSHQEGVFY-----KGSLYFTTPEPFSIVRFDLENG 227 (372)
Q Consensus 194 ~~~~~~~~~v~~-----~G~~y~~~~~~~~i~~yD~~~~ 227 (372)
.....+.+ +|...+.+.....+..||+.+.
T Consensus 210 ----~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 210 ----NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp ----SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred ----CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 11112222 4666666666667888998654
No 90
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=82.10 E-value=24 Score=30.50 Aligned_cols=197 Identities=13% Similarity=0.067 Sum_probs=99.8
Q ss_pred CcEEEEecCCCceEEEEeccccceeccCCCCC--CC-CceeEEEEe-CCCCEEEEEEeec---------------CCCce
Q 017381 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY--PF-DFELLTLVS-TPSGYKIFMLFAK---------------SFPNY 170 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~--~~-~~~~~~~~~-~~~~ykvv~~~~~---------------~~~~~ 170 (372)
+|-|++... ...+.++|+.+++.+.+..... +. ....+++++ .+ ++++.... .....
T Consensus 91 ~g~l~v~d~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G---~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 166 (322)
T 2fp8_A 91 NNQLYIVDC-YYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG---IVYFTDVSTLYDDRGVQQIMDTSDKTGR 166 (322)
T ss_dssp TTEEEEEET-TTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC---CEEEEESCSSCCTTCHHHHHHHTCCCEE
T ss_pred CCcEEEEEC-CCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC---EEEEECCcccccccccceehcccCCCce
Confidence 665555432 2458889998887655532111 11 112344443 22 45554321 11246
Q ss_pred EEEEECCCCCccccccCCCCccccccCCCcccEEEC--CE-EEEeeeCCcEEEEEecCCC---eeeccCCCCccccccCC
Q 017381 171 AFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYK--GS-LYFTTPEPFSIVRFDLENG---IWETPNDANDHMTMMLP 244 (372)
Q Consensus 171 ~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~--G~-~y~~~~~~~~i~~yD~~~~---~w~~i~~p~~~~~~~~p 244 (372)
+.+|+..++..+.... .+ ....++.++ |. +|+.......|..||+... ..+.+. . +|
T Consensus 167 v~~~d~~~~~~~~~~~------~~---~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~-------~~ 229 (322)
T 2fp8_A 167 LIKYDPSTKETTLLLK------EL---HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-K-------IP 229 (322)
T ss_dssp EEEEETTTTEEEEEEE------EE---SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-E-------CS
T ss_pred EEEEeCCCCEEEEecc------CC---ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-e-------CC
Confidence 8889988776543320 11 122355553 54 7766555567999998753 222211 0 22
Q ss_pred CcccccceeeeccCCCeEEEEEeeecCCc---cceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCE
Q 017381 245 HELTFFRLVNDGEESNKLYLIGGVGRNGI---STTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGM 321 (372)
Q Consensus 245 ~~~~~~~lv~e~~~~g~L~vv~~~~~~~~---~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (372)
. -..+... -+|.|++......... ...-.|++++++++-...-..|.... +. ....++..++.
T Consensus 230 g---P~gi~~d--~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~---~~------~~~~~~~~~g~ 295 (322)
T 2fp8_A 230 N---PGNIKRN--ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFA---GE------HFEQIQEHDGL 295 (322)
T ss_dssp S---EEEEEEC--TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTT---TS------CCCEEEEETTE
T ss_pred C---CCCeEEC--CCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCc---cc------cceEEEEeCCE
Confidence 1 1123324 6789998875310000 01346888888776444434442210 00 11123346788
Q ss_pred EEEEeecCCeEEEEECCCCc
Q 017381 322 ICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 322 i~~~~~~~~~v~~yd~~~~~ 341 (372)
+|+.....+.|..|++..+.
T Consensus 296 L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 296 LYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp EEEECSSCSEEEEEEC----
T ss_pred EEEeecCCCceEEEeccccc
Confidence 99988777889999987654
No 91
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=81.84 E-value=21 Score=29.58 Aligned_cols=188 Identities=11% Similarity=0.065 Sum_probs=95.8
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
..+|-+++... .+.+.++|+.++....++.... .....+++++.+ ++++... ....+.+|+.++.......
T Consensus 75 ~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~-~~p~~i~~~~~g---~l~v~~~--~~~~i~~~~~~~~~~~~~~-- 145 (270)
T 1rwi_B 75 DGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGL-NYPEGLAVDTQG---AVYVADR--GNNRVVKLAAGSKTQTVLP-- 145 (270)
T ss_dssp CTTCCEEEEET-TTEEEEECTTCSCCEECCCCSC-SSEEEEEECTTC---CEEEEEG--GGTEEEEECTTCCSCEECC--
T ss_pred CCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCc-CCCcceEECCCC---CEEEEEC--CCCEEEEEECCCceeEeec--
Confidence 44565555543 5789999998877655542211 112344444322 3555432 1246778876654433221
Q ss_pred CCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEE
Q 017381 188 GFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLI 265 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv 265 (372)
. . .. ....++.+ +|.+|+.......|..||..+......... .......+... -+|.|++.
T Consensus 146 ~--~-~~---~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~p~~i~~d--~~g~l~v~ 208 (270)
T 1rwi_B 146 F--T-GL---NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFT---------DITAPWGIAVD--EAGTVYVT 208 (270)
T ss_dssp C--C-SC---CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCS---------SCCSEEEEEEC--TTCCEEEE
T ss_pred c--c-cC---CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeeccc---------CCCCceEEEEC--CCCCEEEE
Confidence 0 0 00 11224444 588887765555799999887654332111 10111223323 46788887
Q ss_pred EeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceE--EEEeeCCEEEEEeecCCeEEEEECCCCc
Q 017381 266 GGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHV--YCFWHQGMICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 266 ~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (372)
... ...+.+| +..+.-... .+. .....+ .++..++.+|+.....+.|.+|++...+
T Consensus 209 ~~~-----~~~v~~~--~~~~~~~~~--~~~-----------~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 209 EHN-----TNQVVKL--LAGSTTSTV--LPF-----------TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ETT-----TSCEEEE--CTTCSCCEE--CCC-----------CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ECC-----CCcEEEE--cCCCCccee--ecc-----------CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 641 2344555 444431111 110 001112 2333445689988777889999988764
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=81.74 E-value=36 Score=32.28 Aligned_cols=201 Identities=8% Similarity=0.002 Sum_probs=97.4
Q ss_pred ecCcEEEEecCCCceEEEEecccccee-ccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEEC--CCCCcccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSR-TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDS--TDQSWSKF 184 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~-~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s--~~~~W~~~ 184 (372)
+-+|.+++....++.+.++|+.|++.. .++.. .....+++.+.++ .+++.... ..+.+||. .+++ ..
T Consensus 146 ~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g---~~~~~v~~spdg~--~l~v~~~d---~~V~v~D~~~~t~~--~~ 215 (543)
T 1nir_A 146 DLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG---YAVHISRMSASGR--YLLVIGRD---ARIDMIDLWAKEPT--KV 215 (543)
T ss_dssp CGGGEEEEEEGGGTEEEEEETTTCCEEEEEECS---TTEEEEEECTTSC--EEEEEETT---SEEEEEETTSSSCE--EE
T ss_pred CCCCEEEEEEcCCCeEEEEECCCceEEEEEecC---cccceEEECCCCC--EEEEECCC---CeEEEEECcCCCCc--EE
Confidence 346666665555678999999998753 33311 1123344433222 44444432 78999999 5543 22
Q ss_pred ccCCCCccccccCCCcccEEE------CCE-EEEeeeCCcEEEEEecCCCeeec-cCCCCcccc--ccCCCcccccceee
Q 017381 185 DIDGFPSMILSQSSHQEGVFY------KGS-LYFTTPEPFSIVRFDLENGIWET-PNDANDHMT--MMLPHELTFFRLVN 254 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~------~G~-~y~~~~~~~~i~~yD~~~~~w~~-i~~p~~~~~--~~~p~~~~~~~lv~ 254 (372)
. .++.+ .....+.+ +|+ +|..+.....+.++|..+.+-.. +...+...+ .+.|... ...++.
T Consensus 216 ~--~i~~g-----~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~-v~~i~~ 287 (543)
T 1nir_A 216 A--EIKIG-----IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR-VAAIIA 287 (543)
T ss_dssp E--EEECC-----SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCC-EEEEEE
T ss_pred E--EEecC-----CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCc-eEEEEE
Confidence 2 12211 11122333 564 55555445678999988765432 221100000 0001101 112332
Q ss_pred eccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEE
Q 017381 255 DGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEIL 333 (372)
Q Consensus 255 e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~ 333 (372)
. -+|..+++.. .....+.+|.+...+.- ++.+++.. . ...-..+. .+..+++.....+.|.
T Consensus 288 s--~~~~~~~vs~----~~~g~i~vvd~~~~~~l-~~~~i~~~---~--------~~~~~~~spdg~~l~va~~~~~~v~ 349 (543)
T 1nir_A 288 S--HEHPEFIVNV----KETGKVLLVNYKDIDNL-TVTSIGAA---P--------FLHDGGWDSSHRYFMTAANNSNKVA 349 (543)
T ss_dssp C--SSSSEEEEEE----TTTTEEEEEECTTSSSC-EEEEEECC---S--------SCCCEEECTTSCEEEEEEGGGTEEE
T ss_pred C--CCCCEEEEEE----CCCCeEEEEEecCCCcc-eeEEeccC---c--------CccCceECCCCCEEEEEecCCCeEE
Confidence 1 3455444443 12357777776543331 12233211 0 01112332 4455677766678899
Q ss_pred EEECCCCceEE
Q 017381 334 YYNVARRTWHW 344 (372)
Q Consensus 334 ~yd~~~~~w~~ 344 (372)
++|+++++...
T Consensus 350 v~D~~tg~l~~ 360 (543)
T 1nir_A 350 VIDSKDRRLSA 360 (543)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCeEEE
Confidence 99999997654
No 93
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=81.68 E-value=30 Score=31.21 Aligned_cols=106 Identities=10% Similarity=0.044 Sum_probs=59.6
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCC-CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~-~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
|.+++|.+.. ++.++|||..|++...+-.... ......+++.+.+ +.++.++ ....+.+||..+++= +.
T Consensus 114 S~~n~lAvgl--d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg---~~lasgs--~Dg~v~iWd~~~~~~--~~- 183 (420)
T 4gga_A 114 SSGNVLAVAL--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG---NYLAVGT--SSAEVQLWDVQQQKR--LR- 183 (420)
T ss_dssp CTTSEEEEEE--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS---SEEEEEE--TTSCEEEEETTTTEE--EE-
T ss_pred CCCCEEEEEe--CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCC---CEEEEEE--CCCeEEEEEcCCCcE--EE-
Confidence 4566655543 4799999999998765433321 1122345554332 3444444 345788999887642 11
Q ss_pred CCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCe
Q 017381 187 DGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGI 228 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~ 228 (372)
.+.. +......+..++.+...+.....+..+|.....
T Consensus 184 -~~~~----h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~ 220 (420)
T 4gga_A 184 -NMTS----HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAE 220 (420)
T ss_dssp -EECC----CSSCEEEEEEETTEEEEEETTSEEEEEETTSSS
T ss_pred -EEeC----CCCceEEEeeCCCEEEEEeCCCceeEeeecccc
Confidence 1111 111223455677766666666678888876543
No 94
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=81.39 E-value=31 Score=31.27 Aligned_cols=106 Identities=6% Similarity=-0.016 Sum_probs=53.7
Q ss_pred EEEEecCCCceEEEEeccccceeccCCC-CCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCC
Q 017381 112 LLCFSLPSSSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFP 190 (372)
Q Consensus 112 ll~~~~~~~~~~~v~NP~t~~~~~lP~~-~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p 190 (372)
+|.. +..++.+.|||..+++...+-.. .-......+.+.+.... .++. ++ .+..+.+||.+++.-+... ...
T Consensus 134 ~las-Gs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~-~l~s-~s--~D~~v~iwd~~~~~~~~~~--~~~ 206 (435)
T 4e54_B 134 TVAV-GSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTN-QFYA-SS--MEGTTRLQDFKGNILRVFA--SSD 206 (435)
T ss_dssp CEEE-EETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTT-EEEE-EC--SSSCEEEEETTSCEEEEEE--CCS
T ss_pred EEEE-EeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCC-EEEE-Ee--CCCEEEEeeccCCceeEEe--ccC
Confidence 4433 33467899999988875433221 11112234455432222 3333 32 2356888998876554433 111
Q ss_pred ccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCe
Q 017381 191 SMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI 228 (372)
Q Consensus 191 ~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~ 228 (372)
. . ......+.+ +|.+.+.+.....|..+|+..+.
T Consensus 207 ~--~--~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 207 T--I--NIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp S--C--SCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB
T ss_pred C--C--CccEEEEEECCCCCEEEEEeCCCcEeeeccCcce
Confidence 1 0 011112222 56666666655678899987654
No 95
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=81.35 E-value=24 Score=29.96 Aligned_cols=190 Identities=14% Similarity=0.086 Sum_probs=89.4
Q ss_pred CceEEEEeccccceeccCCCC---CCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccc-ccCCCCccccc
Q 017381 120 SSSFLVCNLVTLSSRTIDFPT---YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF-DIDGFPSMILS 195 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~---~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~-~~~~~p~~~~~ 195 (372)
.+.+.++|+.+++...+.... .......+.+++ +.-++++... ...+.+|+.. ++.+.. . .... ...
T Consensus 45 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~--~~g~l~v~~~---~~~l~~~d~~-g~~~~~~~--~~~~-~~~ 115 (314)
T 1pjx_A 45 AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDR--DANQLFVADM---RLGLLVVQTD-GTFEEIAK--KDSE-GRR 115 (314)
T ss_dssp CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECS--SSSEEEEEET---TTEEEEEETT-SCEEECCS--BCTT-SCB
T ss_pred CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEec--CCCcEEEEEC---CCCEEEEeCC-CCEEEEEe--ccCC-Ccc
Confidence 467899999898876554210 001112333332 2124555432 1368889988 766544 2 1111 010
Q ss_pred cCCCcccEEE--CCEEEEeeeCC---------------cEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccC
Q 017381 196 QSSHQEGVFY--KGSLYFTTPEP---------------FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEE 258 (372)
Q Consensus 196 ~~~~~~~v~~--~G~~y~~~~~~---------------~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~ 258 (372)
. .....+.+ +|.+|+.+... ..+..||+. .+...+.... -.|..... .++.. -
T Consensus 116 ~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-----~~~~~i~~-~~~~d--~ 185 (314)
T 1pjx_A 116 M-QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF-----QFPNGIAV-RHMND--G 185 (314)
T ss_dssp C-BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE-----SSEEEEEE-EECTT--S
T ss_pred c-cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC-----CCcceEEE-ecccC--C
Confidence 0 11223444 57888765432 468888876 4444321010 01221110 00000 2
Q ss_pred CC-eEEEEEeeecCCccceEEEEEEcCCCCEEEE---EecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEE
Q 017381 259 SN-KLYLIGGVGRNGISTTMKLWELGCGGNWIEV---ERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILY 334 (372)
Q Consensus 259 ~g-~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v---~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~ 334 (372)
+| .|++... ....+.+|.++..+..... ..++... . ....-.++..++.+++.....+.|..
T Consensus 186 dg~~l~v~~~-----~~~~i~~~~~~~~g~~~~~~~~~~~~~~~----~-----~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 186 RPYQLIVAET-----PTKKLWSYDIKGPAKIENKKVWGHIPGTH----E-----GGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp CEEEEEEEET-----TTTEEEEEEEEETTEEEEEEEEEECCCCS----S-----CEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCCEEEEEEC-----CCCeEEEEECCCCCccccceEEEECCCCC----C-----CCCCceEECCCCCEEEEEcCCCEEEE
Confidence 45 4666543 1346777766533333221 2222100 0 00111233445678888766678999
Q ss_pred EECCCCce
Q 017381 335 YNVARRTW 342 (372)
Q Consensus 335 yd~~~~~w 342 (372)
||+++++.
T Consensus 252 ~d~~~g~~ 259 (314)
T 1pjx_A 252 FGPDGGQP 259 (314)
T ss_dssp ECTTCBSC
T ss_pred EcCCCCcE
Confidence 99986543
No 96
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=81.30 E-value=29 Score=30.94 Aligned_cols=107 Identities=12% Similarity=-0.005 Sum_probs=54.8
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
+.+|-.++.+..++.+.+||..+++....-... ......+.+.+.+ -.++ .++ ....+.+||..++.-...-
T Consensus 132 s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~p~~--~~l~-s~s--~d~~v~iwd~~~~~~~~~~-- 203 (393)
T 1erj_A 132 SPDGKFLATGAEDRLIRIWDIENRKIVMILQGH-EQDIYSLDYFPSG--DKLV-SGS--GDRTVRIWDLRTGQCSLTL-- 203 (393)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTS--SEEE-EEE--TTSEEEEEETTTTEEEEEE--
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCcEEEEEccC-CCCEEEEEEcCCC--CEEE-Eec--CCCcEEEEECCCCeeEEEE--
Confidence 446633333334678999999887753321110 1112233443322 2333 332 3467889998876543221
Q ss_pred CCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCee
Q 017381 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
... .....+.+ +|.+...+.....|..||+.+.+.
T Consensus 204 ~~~-------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 204 SIE-------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp ECS-------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred EcC-------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 111 11112222 566666666666799999887654
No 97
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=79.39 E-value=33 Score=30.37 Aligned_cols=112 Identities=8% Similarity=-0.008 Sum_probs=54.4
Q ss_pred cEEEEecCCCceEEEEeccccceeccCCCCC-----CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-----PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~-----~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
+-+++....++.+.+||..+++....-.... ......+.+.+.+. ..++..........+.+||..++.-....
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~d~~~~~i~~~d~~~~~~~~~~ 256 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNS-TRVATATGSDNDPSILIWDLRNANTPLQT 256 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCT-TEEEEEECCSSSCCCCEEETTSTTSCSBC
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCC-CEEEEEECCCCCceEEEEeCCCCCCCcEE
Confidence 4333333346789999998877433222111 11222344433322 23333332222237889998875321111
Q ss_pred cCCCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCee
Q 017381 186 IDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
+.. ........+.+ +|.+.+.+.....|..||+.+.+-
T Consensus 257 ---~~~---~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 257 ---LNQ---GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ 297 (416)
T ss_dssp ---CCS---CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE
T ss_pred ---eec---CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc
Confidence 110 01111123333 566666666666799999887543
No 98
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=79.28 E-value=28 Score=29.92 Aligned_cols=110 Identities=12% Similarity=0.056 Sum_probs=62.7
Q ss_pred cEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEE
Q 017381 202 GVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKL 279 (372)
Q Consensus 202 ~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~v 279 (372)
++.+ +|.+|+.......|..||+..+.-..+. .+.. -..+... -+|+||+.... .....|
T Consensus 36 gia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~---------~~~~--p~gia~~--~dG~l~vad~~-----~~~~~v 97 (306)
T 2p4o_A 36 NLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT---------VEGK--VSGLAFT--SNGDLVATGWN-----ADSIPV 97 (306)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE---------CSSE--EEEEEEC--TTSCEEEEEEC-----TTSCEE
T ss_pred eEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe---------CCCC--ceeEEEc--CCCcEEEEecc-----CCcceE
Confidence 4444 6889998766667999998765322222 2211 1123323 57899887642 123356
Q ss_pred EEEcC-CCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 017381 280 WELGC-GGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (372)
Q Consensus 280 w~l~~-~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (372)
+.++. +++.+.+..++.. ....-.++..++.+|+.....+.|..+|+.++
T Consensus 98 ~~~d~~~g~~~~~~~~~~~-----------~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPDA-----------IFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEECTTSCEEEEEECTTC-----------SCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEcCCCCeEEEEEeCCCc-----------cccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 66653 4456666555321 11122234556677887655678999998875
No 99
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=79.15 E-value=27 Score=29.26 Aligned_cols=199 Identities=13% Similarity=0.141 Sum_probs=96.6
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCC----CCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYP----FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~----~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~ 183 (372)
+.+|-+++.....+.+.+||+..+....++..... .....++++. .+. ++++.... ....+.+|+.....-+.
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~-~~g-~l~v~~~~-~~~~i~~~d~~g~~~~~ 114 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVR-NSG-DIIVTERS-PTHQIQIYNQYGQFVRK 114 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEET-TTT-EEEEEECG-GGCEEEEECTTSCEEEE
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEc-CCC-eEEEEcCC-CCCEEEEECCCCcEEEE
Confidence 34554444433346788999885555555432111 1122444432 222 45554421 13578889844332222
Q ss_pred cccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCccc-ccceeeeccCCC
Q 017381 184 FDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELT-FFRLVNDGEESN 260 (372)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~-~~~lv~e~~~~g 260 (372)
.. .+. . ....++.+ +|.+|+.......|..||...+....+. .+.... ...+... -+|
T Consensus 115 ~~---~~~--~---~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~---------~~~~~~~p~~i~~~--~~g 175 (286)
T 1q7f_A 115 FG---ATI--L---QHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFG---------CSKHLEFPNGVVVN--DKQ 175 (286)
T ss_dssp EC---TTT--C---SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEE---------CTTTCSSEEEEEEC--SSS
T ss_pred ec---Ccc--C---CCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeC---------CCCccCCcEEEEEC--CCC
Confidence 21 110 0 11123444 5888877665567999997655444332 111111 1223323 578
Q ss_pred eEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCC-eEEEEECCC
Q 017381 261 KLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWP-EILYYNVAR 339 (372)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~v~~yd~~~ 339 (372)
+|++.+.. ...+.+|. ..++... .+... ..+ ....-.++..++.+|+.....+ .|.+||...
T Consensus 176 ~l~v~~~~-----~~~i~~~~--~~g~~~~--~~~~~---g~~-----~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g 238 (286)
T 1q7f_A 176 EIFISDNR-----AHCVKVFN--YEGQYLR--QIGGE---GIT-----NYPIGVGINSNGEILIADNHNNFNLTIFTQDG 238 (286)
T ss_dssp EEEEEEGG-----GTEEEEEE--TTCCEEE--EESCT---TTS-----CSEEEEEECTTCCEEEEECSSSCEEEEECTTS
T ss_pred CEEEEECC-----CCEEEEEc--CCCCEEE--EEccC---Ccc-----CCCcEEEECCCCCEEEEeCCCCEEEEEECCCC
Confidence 98887641 34566664 4444221 12110 000 0011223344567888876555 899999776
Q ss_pred CceEEC
Q 017381 340 RTWHWL 345 (372)
Q Consensus 340 ~~w~~v 345 (372)
+....+
T Consensus 239 ~~~~~~ 244 (286)
T 1q7f_A 239 QLISAL 244 (286)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 655444
No 100
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=78.36 E-value=30 Score=29.27 Aligned_cols=190 Identities=11% Similarity=0.026 Sum_probs=96.0
Q ss_pred EecCcEEEEecCCCceEEEEeccccceeccCCCCCC---CCceeEEEEeCCCCEEEEEE----eec-----------CCC
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYP---FDFELLTLVSTPSGYKIFML----FAK-----------SFP 168 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~---~~~~~~~~~~~~~~ykvv~~----~~~-----------~~~ 168 (372)
.+.+|-+++.....+.+.++|+.+++...+...... .....+++++.+ ++++. +.. ...
T Consensus 76 ~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G---~l~vtd~~~g~~~~~~~~~~~~~~~~ 152 (296)
T 3e5z_A 76 LNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG---SLWFSDPTYGIDKPEEGYGGEMELPG 152 (296)
T ss_dssp ECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS---CEEEEECSHHHHCGGGSSCCCCCSSS
T ss_pred ECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC---CEEEECCccccccccccccccccCCC
Confidence 345664444443346899999999987766432111 111234454432 35553 210 012
Q ss_pred ceEEEEECCCCCccccccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecC-CCee-e--ccCCCCcccccc
Q 017381 169 NYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLE-NGIW-E--TPNDANDHMTMM 242 (372)
Q Consensus 169 ~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~-~~~w-~--~i~~p~~~~~~~ 242 (372)
..++.|+.. ++-+.... .. ....++.+ +|.+++.......|..||+. +.+. . .+.... .-
T Consensus 153 ~~l~~~~~~-g~~~~~~~-~~--------~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~----~~ 218 (296)
T 3e5z_A 153 RWVFRLAPD-GTLSAPIR-DR--------VKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVE----PG 218 (296)
T ss_dssp CEEEEECTT-SCEEEEEC-CC--------SSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCS----SS
T ss_pred cEEEEECCC-CCEEEeec-CC--------CCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCC----CC
Confidence 367777766 44333320 10 11234444 57766544455679999986 4444 1 111000 00
Q ss_pred CCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEe--eCC
Q 017381 243 LPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW--HQG 320 (372)
Q Consensus 243 ~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~--~~~ 320 (372)
.|. .+... .+|+|++... ..+.+| +.+++-......+.. ..-.+++ .++
T Consensus 219 ~p~-----~i~~d--~~G~l~v~~~-------~~v~~~--~~~g~~~~~~~~~~~-------------~~~~~f~~~d~~ 269 (296)
T 3e5z_A 219 KTD-----GLRVD--AGGLIWASAG-------DGVHVL--TPDGDELGRVLTPQT-------------TSNLCFGGPEGR 269 (296)
T ss_dssp CCC-----SEEEB--TTSCEEEEET-------TEEEEE--CTTSCEEEEEECSSC-------------CCEEEEESTTSC
T ss_pred CCC-----eEEEC--CCCCEEEEcC-------CeEEEE--CCCCCEEEEEECCCC-------------ceeEEEECCCCC
Confidence 222 23323 6899988762 234444 555653333233311 0112332 334
Q ss_pred EEEEEeecCCeEEEEECCCCceEE
Q 017381 321 MICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 321 ~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
.+|+.. .+.+..+|+++++.++
T Consensus 270 ~L~v~t--~~~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 270 TLYMTV--STEFWSIETNVRGLEH 291 (296)
T ss_dssp EEEEEE--TTEEEEEECSCCBCCC
T ss_pred EEEEEc--CCeEEEEEcccccccc
Confidence 678876 4689999999988764
No 101
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=78.24 E-value=33 Score=29.75 Aligned_cols=194 Identities=14% Similarity=0.026 Sum_probs=97.9
Q ss_pred EecCcEEEEecCCCceEEEEeccc----cceec-cCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVT----LSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t----~~~~~-lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W 181 (372)
...+|.|+......+.+..+++.+ ..... ++.. . ..-.+++++...+ ++++... ....+++++.....=
T Consensus 38 d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~-~-~~p~glavd~~~~--~ly~~d~--~~~~I~~~~~~g~~~ 111 (316)
T 1ijq_A 38 EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-I-QAPDGLAVDWIHS--NIYWTDS--VLGTVSVADTKGVKR 111 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-C-SCCCEEEEETTTT--EEEEEET--TTTEEEEEETTSSSE
T ss_pred EeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC-C-CCcCEEEEeecCC--eEEEEEC--CCCEEEEEeCCCCce
Confidence 345677777766567899999876 22222 2211 1 1124566663332 5666542 345788888765322
Q ss_pred cccccCCCCccccccCCCcccEEE---CCEEEEeeeCC-cEEEEEecCCCeeeccCCCCccccccCCCcccccceeeecc
Q 017381 182 SKFDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGE 257 (372)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~-~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~ 257 (372)
+.+. . . .+ ..-.++.+ +|.+||..... ..|..+|+....-..+...+ ...|.+ +... .
T Consensus 112 ~~~~--~--~-~~---~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~----~~~P~g-----la~d-~ 173 (316)
T 1ijq_A 112 KTLF--R--E-NG---SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN----IQWPNG-----ITLD-L 173 (316)
T ss_dssp EEEE--E--C-TT---CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS----CSCEEE-----EEEE-T
T ss_pred EEEE--E--C-CC---CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECC----CCCceE-----EEEe-c
Confidence 2221 0 0 01 11234444 68999987653 57999998644333221000 002322 3321 1
Q ss_pred CCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEEC
Q 017381 258 ESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNV 337 (372)
Q Consensus 258 ~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~ 337 (372)
.+++||++.. ....|.+..++.. .-..+...+.. + .........++.+|+.....+.|..+|.
T Consensus 174 ~~~~lY~~D~-----~~~~I~~~d~dg~-~~~~~~~~~~~-----~------~~P~giav~~~~ly~~d~~~~~V~~~~~ 236 (316)
T 1ijq_A 174 LSGRLYWVDS-----KLHSISSIDVNGG-NRKTILEDEKR-----L------AHPFSLAVFEDKVFWTDIINEAIFSANR 236 (316)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTSC-SCEEEEECTTT-----T------SSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred cCCEEEEEEC-----CCCeEEEEecCCC-ceEEEeecCCc-----c------CCcEEEEEECCEEEEEECCCCeEEEEeC
Confidence 3688999875 2345666655422 22222221100 0 0112222356889998877778999998
Q ss_pred CCCc
Q 017381 338 ARRT 341 (372)
Q Consensus 338 ~~~~ 341 (372)
.+++
T Consensus 237 ~~g~ 240 (316)
T 1ijq_A 237 LTGS 240 (316)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 7664
No 102
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=78.12 E-value=32 Score=29.51 Aligned_cols=198 Identities=8% Similarity=-0.067 Sum_probs=95.7
Q ss_pred cCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCC
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDG 188 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~ 188 (372)
.+|-|++.....++++.+||.++....++.. ....++++++.+ ++++.........+..|+..+++.+... .
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~---~~p~gia~~~dG---~l~vad~~~~~~~v~~~d~~~g~~~~~~--~ 112 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPDGNQQIHATVE---GKVSGLAFTSNG---DLVATGWNADSIPVVSLVKSDGTVETLL--T 112 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTTCCEEEEEECS---SEEEEEEECTTS---CEEEEEECTTSCEEEEEECTTSCEEEEE--E
T ss_pred CCCCEEEEeCCCCeEEEECCCCceEEEEeCC---CCceeEEEcCCC---cEEEEeccCCcceEEEEcCCCCeEEEEE--e
Confidence 4565555554457888999887543332221 112344444332 3555443222335778888888776554 2
Q ss_pred CCccccccCCCcccEE--ECCEEEEeeeCCcEEEEEecCCCeeecc-CCCCccccccCC-Ccccc-cceeeeccCCCeEE
Q 017381 189 FPSMILSQSSHQEGVF--YKGSLYFTTPEPFSIVRFDLENGIWETP-NDANDHMTMMLP-HELTF-FRLVNDGEESNKLY 263 (372)
Q Consensus 189 ~p~~~~~~~~~~~~v~--~~G~~y~~~~~~~~i~~yD~~~~~w~~i-~~p~~~~~~~~p-~~~~~-~~lv~e~~~~g~L~ 263 (372)
.+.. ....++. -++.+|+.......|..+|+.+.+-+.. ..+. .....+ ..... ..+ .. -++.||
T Consensus 113 ~~~~-----~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~--~~~~~~~~~~~~pngi-s~--dg~~ly 182 (306)
T 2p4o_A 113 LPDA-----IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPM--LARSNSESVFPAANGL-KR--FGNFLY 182 (306)
T ss_dssp CTTC-----SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGG--GSCSSTTCCSCSEEEE-EE--ETTEEE
T ss_pred CCCc-----cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCc--cccccccCCCCcCCCc-Cc--CCCEEE
Confidence 2220 1112222 2456676554445788999875422110 0000 000000 11111 123 22 345688
Q ss_pred EEEeeecCCccceEEEEEEcCCCC---EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGN---WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~---W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (372)
+... ....|.++.++..++ ........ ...-.++..++.+|+.....+.|.+||+. +
T Consensus 183 v~d~-----~~~~I~~~~~~~~g~~~~~~~~~~~~--------------~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G 242 (306)
T 2p4o_A 183 VSNT-----EKMLLLRIPVDSTDKPGEPEIFVEQT--------------NIDDFAFDVEGNLYGATHIYNSVVRIAPD-R 242 (306)
T ss_dssp EEET-----TTTEEEEEEBCTTSCBCCCEEEEESC--------------CCSSEEEBTTCCEEEECBTTCCEEEECTT-C
T ss_pred EEeC-----CCCEEEEEEeCCCCCCCccEEEeccC--------------CCCCeEECCCCCEEEEeCCCCeEEEECCC-C
Confidence 8764 235666776654232 22222210 01123444455689988777889999986 5
Q ss_pred ceEE
Q 017381 341 TWHW 344 (372)
Q Consensus 341 ~w~~ 344 (372)
+...
T Consensus 243 ~~~~ 246 (306)
T 2p4o_A 243 STTI 246 (306)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 5543
No 103
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=77.98 E-value=23 Score=30.44 Aligned_cols=67 Identities=6% Similarity=-0.051 Sum_probs=35.6
Q ss_pred CcEEEEecCCCceEEEEeccccceec-cCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCc
Q 017381 110 KGLLCFSLPSSSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W 181 (372)
++.+++.....+.+.++|+.+++... ++. +.......+++.+.+ -.+++.. .....+.+||..+++-
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~s~dg--~~~~v~~--~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVYKSCVM-PDKFGPGTAMMAPDN--RTAYVLN--NHYGDIYGIDLDTCKN 77 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEEEEEEC-SSCCSSCEEEECTTS--SEEEEEE--TTTTEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEEEEEec-CCCCCCceeEECCCC--CEEEEEe--CCCCcEEEEeCCCCcE
Confidence 44334433345789999999887543 322 111112334443332 2344443 2345789999987754
No 104
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=77.83 E-value=35 Score=29.77 Aligned_cols=144 Identities=10% Similarity=0.099 Sum_probs=70.6
Q ss_pred CceEEEEECCCCCccccccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCC
Q 017381 168 PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPH 245 (372)
Q Consensus 168 ~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~ 245 (372)
+..+.+|+..++.|.... .... .....-..+.+ +|.....++....+..+|..+..+..+.. +..
T Consensus 37 D~~i~iw~~~~~~~~~~~--~~~~---~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~--------~~~ 103 (345)
T 3fm0_A 37 DRRIRIWGTEGDSWICKS--VLSE---GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT--------LEG 103 (345)
T ss_dssp TSCEEEEEEETTEEEEEE--EECS---SCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE--------ECC
T ss_pred CCeEEEEEcCCCcceeee--eecc---ccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEE--------ccC
Confidence 356788888888775332 0100 00011122333 46655556655568888887765543210 111
Q ss_pred -cccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEE
Q 017381 246 -ELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMI 322 (372)
Q Consensus 246 -~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i 322 (372)
...-..+... -+|++++.+.. ...+.+|.++....+..+..+... ...+.++ ..++.+
T Consensus 104 h~~~v~~v~~s--p~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~~~~~h------------~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 104 HENEVKSVAWA--PSGNLLATCSR-----DKSVWVWEVDEEDEYECVSVLNSH------------TQDVKHVVWHPSQEL 164 (345)
T ss_dssp CSSCEEEEEEC--TTSSEEEEEET-----TSCEEEEEECTTSCEEEEEEECCC------------CSCEEEEEECSSSSC
T ss_pred CCCCceEEEEe--CCCCEEEEEEC-----CCeEEEEECCCCCCeEEEEEecCc------------CCCeEEEEECCCCCE
Confidence 1111122211 46777666552 357999999765556555443211 1112222 222333
Q ss_pred EEEeecCCeEEEEECCCCceE
Q 017381 323 CVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 323 ~~~~~~~~~v~~yd~~~~~w~ 343 (372)
++.+...+.|.+||.++++|.
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEE
T ss_pred EEEEeCCCcEEEEEecCCCEE
Confidence 344434456777777777654
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=77.74 E-value=18 Score=35.98 Aligned_cols=196 Identities=6% Similarity=0.007 Sum_probs=89.6
Q ss_pred CCceEEEEeccccceeccCCCCC-CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccC
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~-~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (372)
.++.+.+||..++++..+..... ......+.+.+.... +.++.++ ....+.+||..++.-.... .... ..
T Consensus 75 ~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs--~dg~I~vwdl~~~~~~~~~--~~~~----~~ 145 (753)
T 3jro_A 75 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVAS--SDGKVSVVEFKENGTTSPI--IIDA----HA 145 (753)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEE--TTSEEEEEECCSSSCCCCE--EEEC----CS
T ss_pred CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCC-CEEEEEe--CCCcEEEEEeecCCCccee--Eeec----CC
Confidence 46889999999987554433221 112223344332101 2344443 3357889998776321111 0000 00
Q ss_pred CCcccEEE---------------CCEEEEeeeCCcEEEEEecCCC--eeeccCCCCccccccCC-CcccccceeeeccCC
Q 017381 198 SHQEGVFY---------------KGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTMMLP-HELTFFRLVNDGEES 259 (372)
Q Consensus 198 ~~~~~v~~---------------~G~~y~~~~~~~~i~~yD~~~~--~w~~i~~p~~~~~~~~p-~~~~~~~lv~e~~~~ 259 (372)
.....+.. +|.....++....|..||+.+. .+..+. . +. .......+... -+
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~-~-------~~~h~~~V~~l~~s--p~ 215 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES-T-------LEGHSDWVRDVAWS--PT 215 (753)
T ss_dssp SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEE-E-------ECCCSSCEEEEEEC--CC
T ss_pred CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeee-e-------ecCCCCcEEEEEec--cC
Confidence 01111211 3555555655556888988654 222211 0 11 11111122211 24
Q ss_pred ---CeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEE
Q 017381 260 ---NKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYY 335 (372)
Q Consensus 260 ---g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~y 335 (372)
|++++.++. ...+.+|.+..... +....... .. ........++..++..++.+...+.|.+|
T Consensus 216 ~~~~~~l~s~s~-----Dg~I~iwd~~~~~~~~~~~~~~~-------~~--~~~~v~~l~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 216 VLLRSYLASVSQ-----DRTCIIWTQDNEQGPWKKTLLKE-------EK--FPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp CSSSEEEEEEES-----SSCEEEEEESSSSSCCBCCBSSS-------SC--CSSCCCCEEECTTTCCEEEECSSSCEECC
T ss_pred CCCCCEEEEEec-----CCEEEEecCCCCCCcceeEEecc-------CC--CCCceEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 677776652 35799999875432 32111000 00 00000111233344444544456679999
Q ss_pred ECCC-CceEECCC
Q 017381 336 NVAR-RTWHWLPS 347 (372)
Q Consensus 336 d~~~-~~w~~v~~ 347 (372)
|+.+ ++|.....
T Consensus 282 d~~~~~~~~~~~~ 294 (753)
T 3jro_A 282 KENLEGKWEPAGE 294 (753)
T ss_dssp BCCSSSCCBCCCC
T ss_pred ecCCCCCcccccc
Confidence 9985 56665443
No 106
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=77.67 E-value=35 Score=29.73 Aligned_cols=150 Identities=11% Similarity=0.127 Sum_probs=71.7
Q ss_pred CCceEEEEeccccceeccCCCCCCC--CceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCcccccc
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTYPF--DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQ 196 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~~~--~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~ 196 (372)
.++.+.+||..++++.......... ....+++.+.+ +.++.++ .+..+.+|+..++.+.... .+.. +
T Consensus 36 ~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g---~~l~s~s--~D~~v~iw~~~~~~~~~~~--~~~~----h 104 (345)
T 3fm0_A 36 GDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCG---NYLASAS--FDATTCIWKKNQDDFECVT--TLEG----H 104 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTS---SEEEEEE--TTSCEEEEEECCC-EEEEE--EECC----C
T ss_pred CCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCC---CEEEEEE--CCCcEEEEEccCCCeEEEE--EccC----C
Confidence 3578899998887754322111111 12234443322 2344443 2356778888777665443 1111 0
Q ss_pred CCCcccEEE--CCEEEEeeeCCcEEEEEecCCCe-eeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCc
Q 017381 197 SSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGI-WETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (372)
Q Consensus 197 ~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~-w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~ 273 (372)
...-..+.+ +|.....++....|..+|+.+.. ...+... .........+.-. -+|++++.+..
T Consensus 105 ~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-------~~h~~~v~~~~~~--p~~~~l~s~s~----- 170 (345)
T 3fm0_A 105 ENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVL-------NSHTQDVKHVVWH--PSQELLASASY----- 170 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEE-------CCCCSCEEEEEEC--SSSSCEEEEET-----
T ss_pred CCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEe-------cCcCCCeEEEEEC--CCCCEEEEEeC-----
Confidence 011122333 46666666666678999987542 2221100 0111111122211 36666665541
Q ss_pred cceEEEEEEcCCCCEEEEEec
Q 017381 274 STTMKLWELGCGGNWIEVERV 294 (372)
Q Consensus 274 ~~~i~vw~l~~~~~W~~v~~l 294 (372)
...+.+|.+. .++|....++
T Consensus 171 d~~i~~w~~~-~~~~~~~~~~ 190 (345)
T 3fm0_A 171 DDTVKLYREE-EDDWVCCATL 190 (345)
T ss_dssp TSCEEEEEEE-TTEEEEEEEE
T ss_pred CCcEEEEEec-CCCEEEEEEe
Confidence 3578999874 3447655554
No 107
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=77.17 E-value=30 Score=28.61 Aligned_cols=197 Identities=9% Similarity=-0.011 Sum_probs=92.7
Q ss_pred EecCc-EEEEecCCCceEEEEeccc-cceeccCCCCCCCCceeEEEEeCCCCEEEEEEee-cCCCceEEEEECCCCCccc
Q 017381 107 SSSKG-LLCFSLPSSSSFLVCNLVT-LSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFA-KSFPNYAFVYDSTDQSWSK 183 (372)
Q Consensus 107 ~s~~G-ll~~~~~~~~~~~v~NP~t-~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~-~~~~~~~~vy~s~~~~W~~ 183 (372)
-+-+| ++.... .+.+++||..+ ++...+...........+.+.+.+. .++.... ......++.++..++.-+.
T Consensus 49 ~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~l~~~~~~~~~~~~ 124 (297)
T 2ojh_A 49 WSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA--LYAISDKVEFGKSAIYLLPSTGGTPRL 124 (297)
T ss_dssp ECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS--EEEEEECTTTSSCEEEEEETTCCCCEE
T ss_pred ECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCCC--EEEEEEeCCCCcceEEEEECCCCceEE
Confidence 34455 343333 46899999999 8776655332211222344433222 3333332 2234678888877766444
Q ss_pred cccCCCCccccccCCCcccEEE--CCE-EEEeeeCCc--EEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccC
Q 017381 184 FDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPEPF--SIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEE 258 (372)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G~-~y~~~~~~~--~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~ 258 (372)
+. .... ...+.+ +|. +++...... .+..+|..+.+...+. . .+....... + . -
T Consensus 125 ~~--~~~~--------~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~-------~~~~~~~~~-~-s--~ 182 (297)
T 2ojh_A 125 MT--KNLP--------SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-H-------GEGRNDGPD-Y-S--P 182 (297)
T ss_dssp CC--SSSS--------EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-C-------SSSCEEEEE-E-C--T
T ss_pred ee--cCCC--------ccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-c-------CCCccccce-E-C--C
Confidence 43 1110 111122 453 444443322 3555556665554432 1 111111112 2 1 4
Q ss_pred CCeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeec--------
Q 017381 259 SNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYT-------- 328 (372)
Q Consensus 259 ~g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~-------- 328 (372)
+|+..++... ....+.+|.++..+. ...+..-.. ......+. .+..|++....
T Consensus 183 dg~~l~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~-------------~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 183 DGRWIYFNSS----RTGQMQIWRVRVDGSSVERITDSAY-------------GDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp TSSEEEEEEC----TTSSCEEEEEETTSSCEEECCCCSE-------------EEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred CCCEEEEEec----CCCCccEEEECCCCCCcEEEecCCc-------------ccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 6775554431 124678999874443 433221100 00011222 34455555432
Q ss_pred --CCeEEEEECCCCceEECC
Q 017381 329 --WPEILYYNVARRTWHWLP 346 (372)
Q Consensus 329 --~~~v~~yd~~~~~w~~v~ 346 (372)
...|.+||+++++...+.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEE
T ss_pred cCceEEEEEecCCCCceeee
Confidence 245999999998775543
No 108
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=76.05 E-value=63 Score=31.82 Aligned_cols=179 Identities=9% Similarity=0.069 Sum_probs=84.5
Q ss_pred CceEEEEeccccceec-cCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCC
Q 017381 120 SSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (372)
++.+.+||..+++... +... ......+.+.+.+ +.+++++ ....+.+|+..++.....-. ... .
T Consensus 34 ~g~v~iwd~~~~~~~~~~~~~--~~~v~~~~~s~~~---~~l~~~~--~dg~i~vw~~~~~~~~~~~~-~~~-------~ 98 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQVT--ETPVRAGKFIARK---NWIIVGS--DDFRIRVFNYNTGEKVVDFE-AHP-------D 98 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECC--SSCEEEEEEEGGG---TEEEEEE--TTSEEEEEETTTCCEEEEEE-CCS-------S
T ss_pred CCEEEEEECCCCceEEEEecC--CCcEEEEEEeCCC---CEEEEEe--CCCeEEEEECCCCcEEEEEe-cCC-------C
Confidence 4678899988876432 2211 1112344454432 2334443 24678999988776532210 111 1
Q ss_pred CcccEEE--CCEEEEeeeCCcEEEEEecCCC-eeeccCCCCccccccCCCcccccceeeeccC-CCeEEEEEeeecCCcc
Q 017381 199 HQEGVFY--KGSLYFTTPEPFSIVRFDLENG-IWETPNDANDHMTMMLPHELTFFRLVNDGEE-SNKLYLIGGVGRNGIS 274 (372)
Q Consensus 199 ~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~-~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~-~g~L~vv~~~~~~~~~ 274 (372)
.-..+.+ +|.....+.....+..||+.++ ........ ...... .+... - +|.+++++.. .
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-------~~~~v~--~~~~~--p~~~~~l~~~~~-----d 162 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-------HEHFVM--CVAFN--PKDPSTFASGCL-----D 162 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEEC-------CSSCEE--EEEEE--TTEEEEEEEEET-----T
T ss_pred CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcC-------CCCcEE--EEEEE--cCCCCEEEEEeC-----C
Confidence 1112222 4554445555567999998765 33221101 111111 12111 2 5666666542 3
Q ss_pred ceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEee--CCEEEEEeecCCeEEEEECCCCce
Q 017381 275 TTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWH--QGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 275 ~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
..+.+|.+..... ......-.. .....++.. ++..++.+...+.|.+||+++++-
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~-------------~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 220 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQER-------------GVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTT-------------CCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEE
T ss_pred CeEEEEECCCCcceeEEecCCCC-------------CEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 5789998754333 433211100 001112221 333444444556788888887653
No 109
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=75.85 E-value=47 Score=30.19 Aligned_cols=112 Identities=6% Similarity=-0.002 Sum_probs=55.9
Q ss_pred ecCc-EEEEecCCCceEEEEeccccceeccC--CCC-CCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccc
Q 017381 108 SSKG-LLCFSLPSSSSFLVCNLVTLSSRTID--FPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (372)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~~~~lP--~~~-~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~ 183 (372)
+-+| +|+... ..+.+++|+..+++....+ .+. .......+.+.+.....+.++.++. ...+.+||..++.-..
T Consensus 158 sp~~~~l~~~~-~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~ 234 (450)
T 2vdu_B 158 AEDDTTVIIAD-KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR--DEHIKISHYPQCFIVD 234 (450)
T ss_dssp CTTSSEEEEEE-TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET--TSCEEEEEESCTTCEE
T ss_pred cCCCCEEEEEe-CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC--CCcEEEEECCCCceee
Confidence 4455 333333 3577888888776644211 111 0111224455543111245555542 3578889887664322
Q ss_pred cccCCCCccccccCCCcccEEE-CCEEEEeeeCCcEEEEEecCCCee
Q 017381 184 FDIDGFPSMILSQSSHQEGVFY-KGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~-~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
.- ... .......+.+ +|...+.++....|..||+.+.+.
T Consensus 235 ~~---~~~----h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 235 KW---LFG----HKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp EE---CCC----CSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCE
T ss_pred ee---ecC----CCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcE
Confidence 11 000 0011112222 677766676666899999987653
No 110
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=75.54 E-value=40 Score=29.27 Aligned_cols=192 Identities=9% Similarity=0.037 Sum_probs=88.6
Q ss_pred ecCcEEEEecCCCceEEEEecccccee--ccCCCC-CCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSR--TIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~--~lP~~~-~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~ 184 (372)
+.+|-.++.+..++.+.+||..+++-. ...... .......+.+.+. . +++... ....+.+||..++.-...
T Consensus 106 s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~s~s---~d~~i~~wd~~~~~~~~~ 179 (340)
T 1got_B 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD--N-QIVTSS---GDTTCALWDIETGQQTTT 179 (340)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET--T-EEEEEE---TTSCEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC--C-cEEEEE---CCCcEEEEECCCCcEEEE
Confidence 445533333334678899998775421 100000 0001112223222 1 343332 235788999887643211
Q ss_pred ccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeE
Q 017381 185 DIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L 262 (372)
- .. .......+.+ +|.+...++....|..+|+.+.+....... ...... .+... -+|++
T Consensus 180 ~----~~----h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~-------h~~~v~--~v~~~--p~~~~ 240 (340)
T 1got_B 180 F----TG----HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-------HESDIN--AICFF--PNGNA 240 (340)
T ss_dssp E----CC----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC-------CSSCEE--EEEEC--TTSSE
T ss_pred E----cC----CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC-------CcCCEE--EEEEc--CCCCE
Confidence 1 10 0011112222 466666666666799999887643321101 111111 12211 46777
Q ss_pred EEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEE--EEeeCCEEEEEeecCCeEEEEECCCC
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVY--CFWHQGMICVCCYTWPEILYYNVARR 340 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (372)
++.+.. ...+.+|.+..... +..+.... ....+. .+..++.+++.+...+.|.+||..++
T Consensus 241 l~s~s~-----d~~v~iwd~~~~~~---~~~~~~~~----------~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 241 FATGSD-----DATCRLFDLRADQE---LMTYSHDN----------IICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp EEEEET-----TSCEEEEETTTTEE---EEEECCTT----------CCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEcC-----CCcEEEEECCCCcE---EEEEccCC----------cccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 666552 35789998753221 11111000 001122 22334555666656678999998876
Q ss_pred ce
Q 017381 341 TW 342 (372)
Q Consensus 341 ~w 342 (372)
+-
T Consensus 303 ~~ 304 (340)
T 1got_B 303 DR 304 (340)
T ss_dssp CE
T ss_pred cE
Confidence 43
No 111
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=75.34 E-value=39 Score=29.03 Aligned_cols=104 Identities=8% Similarity=-0.016 Sum_probs=46.7
Q ss_pred CceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC--ccccccCCCCccccccC
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS--WSKFDIDGFPSMILSQS 197 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~--W~~~~~~~~p~~~~~~~ 197 (372)
++.+.+||..+++...+...........+.+.+...+-+.++.++ ....+.+|+..++. -.... .... .....
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~--~~~~-~v~~~ 117 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD--FGGNLHIWNLEAPEMPVYSVK--GHKE-IINAI 117 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE--TTSCEEEECTTSCSSCSEEEC--CCSS-CEEEE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec--CCCeEEEEeCCCCCccEEEEE--eccc-ceEEE
Confidence 567888998887754332211111112233322210013334343 23568899888764 11111 0000 00000
Q ss_pred CCcc--cEEECCEEEEeeeCCcEEEEEecCCCe
Q 017381 198 SHQE--GVFYKGSLYFTTPEPFSIVRFDLENGI 228 (372)
Q Consensus 198 ~~~~--~v~~~G~~y~~~~~~~~i~~yD~~~~~ 228 (372)
.... ...-+|...+.+.....+..||+.+.+
T Consensus 118 ~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~ 150 (357)
T 3i2n_A 118 DGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD 150 (357)
T ss_dssp EEESGGGCC-CCCEEEEEETTSCEEEECTTSCS
T ss_pred eeccccccCCCccEEEEEeCCCeEEEEeCCCCC
Confidence 0000 011245555556555679999988654
No 112
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=74.65 E-value=39 Score=28.67 Aligned_cols=190 Identities=10% Similarity=0.157 Sum_probs=88.5
Q ss_pred CCceEEEEeccccceeccCCCCC-CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccC
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~-~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (372)
.++.+.+||..++..+.+-.+.. ......+.+.+.... ++++.++ .+..+.+||..++.|.... .+.. ..
T Consensus 29 ~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s--~D~~v~iWd~~~~~~~~~~--~~~~----h~ 99 (297)
T 2pm7_B 29 SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCS--YDGKVMIWKEENGRWSQIA--VHAV----HS 99 (297)
T ss_dssp TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEE--TTTEEEEEEBSSSCBCCCE--EECC----CS
T ss_pred CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcC-CEEEEEc--CCCEEEEEEcCCCceEEEE--Eeec----CC
Confidence 35778889886543322211110 111123333221111 3444443 3467899999988886554 1111 00
Q ss_pred CCcccEEEC----CEEEEeeeCCcEEEEEecCCCe-eeccCCCCccccccCCCcccccceeee---------ccCCCeEE
Q 017381 198 SHQEGVFYK----GSLYFTTPEPFSIVRFDLENGI-WETPNDANDHMTMMLPHELTFFRLVND---------GEESNKLY 263 (372)
Q Consensus 198 ~~~~~v~~~----G~~y~~~~~~~~i~~yD~~~~~-w~~i~~p~~~~~~~~p~~~~~~~lv~e---------~~~~g~L~ 263 (372)
.....+.+. |.+...+.....|..||+.+.. +......+ ............. +..+++++
T Consensus 100 ~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~------h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 100 ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA------HAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC------CSSCEEEEEECCCC------------CCEE
T ss_pred CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec------ccCccceEeecCCcccccccCCCCCCcceE
Confidence 111233332 5555566666678899987642 21110000 0111100000000 00124555
Q ss_pred EEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEE-ee-C---CEEEEEeecCCeEEEEEC
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF-WH-Q---GMICVCCYTWPEILYYNV 337 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~-~~-~---~~i~~~~~~~~~v~~yd~ 337 (372)
+.+. ....+.+|.++.... |..+..+... ...+.++ .. + +..++.....+.|.+||+
T Consensus 174 ~sgs-----~D~~v~lwd~~~~~~~~~~~~~l~~H------------~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 174 VTGG-----ADNLVKIWKYNSDAQTYVLESTLEGH------------SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp EEEE-----TTSCEEEEEEETTTTEEEEEEEECCC------------SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred EEEc-----CCCcEEEEEEcCCCceEEEEEEecCC------------CCceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 5554 135799999975544 7766655311 1223333 22 2 345555555568999998
Q ss_pred CCC
Q 017381 338 ARR 340 (372)
Q Consensus 338 ~~~ 340 (372)
++.
T Consensus 237 ~~~ 239 (297)
T 2pm7_B 237 DNE 239 (297)
T ss_dssp SST
T ss_pred CCC
Confidence 874
No 113
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=74.35 E-value=46 Score=29.40 Aligned_cols=193 Identities=11% Similarity=0.026 Sum_probs=102.9
Q ss_pred EecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
...+|.|+......+.+..+++.++....+...... ...+++++...+ +|++... ....+++++.....-+.+.
T Consensus 81 d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-~p~glavd~~~g--~ly~~d~--~~~~I~~~~~dG~~~~~l~- 154 (349)
T 3v64_C 81 HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-SPGGLAVDWVHD--KLYWTDS--GTSRIEVANLDGAHRKVLL- 154 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS-CCCEEEEETTTT--EEEEEET--TTTEEEEEETTSCSCEEEE-
T ss_pred eccccEEEEEeccCCceEEEecCCCCceEEEeCCCC-CccEEEEecCCC--eEEEEcC--CCCeEEEEcCCCCceEEEE-
Confidence 346777777766567899999988765544322111 123566664333 6666543 3357888887654322221
Q ss_pred CCCCccccccCCCcccEEE---CCEEEEeeeCC-cEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeE
Q 017381 187 DGFPSMILSQSSHQEGVFY---KGSLYFTTPEP-FSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~-~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L 262 (372)
. . .+ ....++.+ +|.+||..... ..|..+|+....-..+...+ ...|. .|... ..+++|
T Consensus 155 -~--~-~l---~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~----~~~Pn-----Gla~d-~~~~~l 217 (349)
T 3v64_C 155 -W--Q-SL---EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH----LFWPN-----GLTID-YAGRRM 217 (349)
T ss_dssp -C--T-TC---SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSS----CSCEE-----EEEEE-TTTTEE
T ss_pred -e--C-CC---CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECC----CCCcc-----eEEEe-CCCCEE
Confidence 0 0 01 11234444 58999998765 67999998754333321010 00122 23321 137889
Q ss_pred EEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCc
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (372)
|++.. ....|..+.++....-+ +.... + ......+..++.||+.....+.|..+|..+++
T Consensus 218 Y~aD~-----~~~~I~~~~~dG~~~~~-~~~~~-------~------~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 218 YWVDA-----KHHVIERANLDGSHRKA-VISQG-------L------PHPFAITVFEDSLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEET-----TTTEEEEEETTSCSCEE-EECSS-------C------SSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEC-----CCCEEEEEeCCCCceEE-EEeCC-------C------CCceEEEEECCEEEEecCCCCeEEEEEccCCC
Confidence 99865 23455555554222222 21111 0 01122223677899988777789999965553
No 114
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=72.77 E-value=34 Score=36.00 Aligned_cols=179 Identities=9% Similarity=0.065 Sum_probs=85.8
Q ss_pred CCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCC
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (372)
.++.+.+||..+++........ ......+++.+.+ +.++.++ ....+.+|+..++...... .... .
T Consensus 981 ~~g~i~i~d~~~~~~~~~~~~h-~~~v~~l~~s~dg---~~l~s~~--~dg~i~vwd~~~~~~~~~~--~~~~------~ 1046 (1249)
T 3sfz_A 981 EDGAIKIIELPNNRVFSSGVGH-KKAVRHIQFTADG---KTLISSS--EDSVIQVWNWQTGDYVFLQ--AHQE------T 1046 (1249)
T ss_dssp TTSCCEEEETTTTSCEEECCCC-SSCCCCEEECSSS---SCEEEEC--SSSBEEEEETTTTEEECCB--CCSS------C
T ss_pred CCCCEEEEEcCCCceeeecccC-CCceEEEEECCCC---CEEEEEc--CCCEEEEEECCCCceEEEe--cCCC------c
Confidence 3578888998887643322111 1112234443322 2233332 2357889999887665443 1111 0
Q ss_pred CcccEEE-CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceE
Q 017381 199 HQEGVFY-KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (372)
Q Consensus 199 ~~~~v~~-~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i 277 (372)
.....+. ++.+ +.++....+..||+.+.+....... ...... .+... -+|++++++.. ...+
T Consensus 1047 v~~~~~~~~~~l-~~~~~dg~v~vwd~~~~~~~~~~~~-------~~~~v~--~~~~s--~d~~~l~s~s~-----d~~v 1109 (1249)
T 3sfz_A 1047 VKDFRLLQDSRL-LSWSFDGTVKVWNVITGRIERDFTC-------HQGTVL--SCAIS--SDATKFSSTSA-----DKTA 1109 (1249)
T ss_dssp EEEEEECSSSEE-EEEESSSEEEEEETTTTCCCEEEEC-------CSSCCC--CEEEC--SSSSSCEEECC-----SSCC
T ss_pred EEEEEEcCCCcE-EEEECCCcEEEEECCCCceeEEEcc-------cCCcEE--EEEEC--CCCCEEEEEcC-----CCcE
Confidence 1112222 3444 3444455789999877643221100 111111 12212 46776665542 3568
Q ss_pred EEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEEEEEeecCCeEEEEECCCCceE
Q 017381 278 KLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 278 ~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
.+|.++.... +..+. .....+.++ ..++..++.+...+.|.+||+++++..
T Consensus 1110 ~iwd~~~~~~---~~~l~------------~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1110 KIWSFDLLSP---LHELK------------GHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp CEECSSSSSC---SBCCC------------CCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCC
T ss_pred EEEECCCcce---eeeec------------cCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceE
Confidence 8997753221 11111 011123333 334445555555567999999987643
No 115
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=72.52 E-value=50 Score=28.98 Aligned_cols=196 Identities=10% Similarity=0.019 Sum_probs=90.4
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCC-CCC--CceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPT-YPF--DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~-~~~--~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~ 184 (372)
+-++.++... .++.+.+||..+++........ ..+ ....+++.+.+ +.++.++ ....+.+||..++.= +
T Consensus 91 s~d~~l~~~s-~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg---~~l~sgs--~d~~i~iwd~~~~~~--~ 162 (344)
T 4gqb_B 91 VGERGILVAS-DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSG---TQAVSGS--KDICIKVWDLAQQVV--L 162 (344)
T ss_dssp ETTTEEEEEE-TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTS---SEEEEEE--TTSCEEEEETTTTEE--E
T ss_pred eCCCeEEEEE-CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCC---CEEEEEe--CCCeEEEEECCCCcE--E
Confidence 3445444333 3578999999988754332211 111 12234443322 3344443 235688999877532 1
Q ss_pred ccCCCCccccccCCCcccEEE--CC-EEEEeeeCCcEEEEEecCCCeeec-cCCCCccccccCCCcccccceeeeccCCC
Q 017381 185 DIDGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESN 260 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G-~~y~~~~~~~~i~~yD~~~~~w~~-i~~p~~~~~~~~p~~~~~~~lv~e~~~~g 260 (372)
. .+.. +...-..+.+ +| .+...++....|..+|+.+.+-.. +... .+. .....+... -.++
T Consensus 163 ~--~~~~----h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-------~~~-~~~~~~~~~-p~~~ 227 (344)
T 4gqb_B 163 S--SYRA----HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS-------APG-YLPTSLAWH-PQQS 227 (344)
T ss_dssp E--EECC----CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-----------C-CCEEEEEEC-SSCT
T ss_pred E--EEcC----cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc-------eee-ccceeeeec-CCCC
Confidence 1 0110 0011112222 34 344455555678999998764332 2111 111 111122210 0256
Q ss_pred eEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE--e-eCCEEEEEeecCCeEEEEEC
Q 017381 261 KLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--W-HQGMICVCCYTWPEILYYNV 337 (372)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~-~~~~i~~~~~~~~~v~~yd~ 337 (372)
++++.+.. ...+.+|.+..... +.++. .....+.++ . ++..+++.+...+.|.+||.
T Consensus 228 ~~l~sg~~-----dg~v~~wd~~~~~~---~~~~~------------~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 228 EVFVFGDE-----NGTVSLVDTKSTSC---VLSSA------------VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDS 287 (344)
T ss_dssp TEEEEEET-----TSEEEEEESCC--C---CEEEE------------CCSSCEEEEEECSSSSCCEEEEETTSCEEEECT
T ss_pred cceEEecc-----CCcEEEEECCCCcE---EEEEc------------CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEEC
Confidence 67666541 35789997753222 11111 001123333 2 23344444444567999999
Q ss_pred CCCceEECC
Q 017381 338 ARRTWHWLP 346 (372)
Q Consensus 338 ~~~~w~~v~ 346 (372)
++++..++.
T Consensus 288 ~~~~~~~~~ 296 (344)
T 4gqb_B 288 SLSELFRSQ 296 (344)
T ss_dssp TCCEEEEEC
T ss_pred CCCcEEEEc
Confidence 998766543
No 116
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=72.11 E-value=47 Score=28.49 Aligned_cols=204 Identities=12% Similarity=0.120 Sum_probs=99.5
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecC--CCceEEEEECCCCCccccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKS--FPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~--~~~~~~vy~s~~~~W~~~~ 185 (372)
+.+|-+++.....+.+.++|+.+++...+.... ......+++++. . ++++..... ....+.+|+..++.-+..-
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~d--g-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSH-KANPAAIKIHKD--G-RLFVCYLGDFKSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECS-SSSEEEEEECTT--S-CEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC-CCCcceEEECCC--C-cEEEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence 456655544434578999999998876653211 112234444433 2 344433211 1247888998877654221
Q ss_pred cCCCCccccccCCCcccEEE--CCEEEEeeeC------CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeecc
Q 017381 186 IDGFPSMILSQSSHQEGVFY--KGSLYFTTPE------PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGE 257 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~------~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~ 257 (372)
. .... . .....+.+ +|.+|+.+.. ...+..+|+.+.+...+... ... ...+...
T Consensus 129 ~-~~~~----~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~---~~~i~~~-- 190 (333)
T 2dg1_A 129 E-DLST----A-YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-------ISV---ANGIALS-- 190 (333)
T ss_dssp C-SSSS----C-CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-------ESS---EEEEEEC--
T ss_pred c-cCcc----C-CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-------CCc---ccceEEC--
Confidence 0 1111 0 11123333 5777775542 24688898877655543200 100 1122212
Q ss_pred CCCe-EEEEEeeecCCccceEEEEEEcCCCC-EEEEE-ecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEE
Q 017381 258 ESNK-LYLIGGVGRNGISTTMKLWELGCGGN-WIEVE-RVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILY 334 (372)
Q Consensus 258 ~~g~-L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~-~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~ 334 (372)
-+|+ |++... ....+.+|.++.++. ..... ..... +.. .....-.++..++.+++.....+.|.+
T Consensus 191 ~dg~~l~v~~~-----~~~~i~~~d~~~~g~~~~~~~~~~~~~----~~~---~~~~~~i~~d~~G~l~v~~~~~~~v~~ 258 (333)
T 2dg1_A 191 TDEKVLWVTET-----TANRLHRIALEDDGVTIQPFGATIPYY----FTG---HEGPDSCCIDSDDNLYVAMYGQGRVLV 258 (333)
T ss_dssp TTSSEEEEEEG-----GGTEEEEEEECTTSSSEEEEEEEEEEE----CCS---SSEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCCCEEEEEeC-----CCCeEEEEEecCCCcCcccccceEEEe----cCC---CCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 4665 776643 134677787754433 33221 11000 000 000111233445668887765678999
Q ss_pred EECCCCceEEC
Q 017381 335 YNVARRTWHWL 345 (372)
Q Consensus 335 yd~~~~~w~~v 345 (372)
||++.+....+
T Consensus 259 ~d~~g~~~~~~ 269 (333)
T 2dg1_A 259 FNKRGYPIGQI 269 (333)
T ss_dssp ECTTSCEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99966555544
No 117
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=72.02 E-value=1e+02 Score=32.32 Aligned_cols=147 Identities=14% Similarity=0.109 Sum_probs=72.0
Q ss_pred EecCcEEEEecCCCceEEEEecccccee-ccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSR-TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~-~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
-+.+|-.++.+..++.+.+||..+++.. .+..- ......+++.+.+ +.++.++ ....+.+||..+++-...-
T Consensus 623 ~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h--~~~v~~~~~s~~~---~~l~s~~--~d~~v~vwd~~~~~~~~~~ 695 (1249)
T 3sfz_A 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAH--EDEVLCCAFSSDD---SYIATCS--ADKKVKIWDSATGKLVHTY 695 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCC--SSCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC--CCCEEEEEEecCC---CEEEEEe--CCCeEEEEECCCCceEEEE
Confidence 3455633333334678999999998743 22211 1112234443322 2344443 3457899999887532211
Q ss_pred cCCCCccccccCCCcccEEE----CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe
Q 017381 186 IDGFPSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~----~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~ 261 (372)
.. .......+.+ ++.+...++....+..+|+.+.+....... ......... + . -+|+
T Consensus 696 ----~~----~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~-------h~~~v~~~~-~-s--p~~~ 756 (1249)
T 3sfz_A 696 ----DE----HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG-------HTNSVNHCR-F-S--PDDE 756 (1249)
T ss_dssp ----EC----CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC-------CSSCEEEEE-E-C--SSTT
T ss_pred ----cC----CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC-------CCCCEEEEE-E-e--cCCC
Confidence 00 0011112222 334444555556799999987654332111 111111112 2 1 4677
Q ss_pred EEEEEeeecCCccceEEEEEEcC
Q 017381 262 LYLIGGVGRNGISTTMKLWELGC 284 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~ 284 (372)
+++++.. ...+.+|.+..
T Consensus 757 ~l~s~s~-----dg~v~vwd~~~ 774 (1249)
T 3sfz_A 757 LLASCSA-----DGTLRLWDVRS 774 (1249)
T ss_dssp EEEEEES-----SSEEEEEEGGG
T ss_pred EEEEEEC-----CCeEEEEeCCC
Confidence 6666542 35789998754
No 118
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=71.43 E-value=51 Score=28.70 Aligned_cols=191 Identities=15% Similarity=0.064 Sum_probs=96.3
Q ss_pred cCcEEEEecCCCceEEEEecccccee-ccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTLSSR-TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~~~-~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
.+|.|+......+.+..+++.++... .+..... ....+++++...+ ++++... ....+++++.....=+.+.
T Consensus 45 ~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l-~~p~glavd~~~g--~ly~~d~--~~~~I~~~~~dG~~~~~l~-- 117 (318)
T 3sov_A 45 SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL-LSPDGLACDWLGE--KLYWTDS--ETNRIEVSNLDGSLRKVLF-- 117 (318)
T ss_dssp GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC-SCCCEEEEETTTT--EEEEEET--TTTEEEEEETTSCSCEEEE--
T ss_pred CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC-CCccEEEEEcCCC--eEEEEEC--CCCEEEEEECCCCcEEEEE--
Confidence 35666666655677888888766321 1111010 1123566663322 5666542 3357888887653222221
Q ss_pred CCCccccccCCCcccEEE---CCEEEEeeeC-CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEE
Q 017381 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPE-PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~~y~~~~~-~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~ 263 (372)
. . .+ ....++.+ +|.+||.... ...|..+|+....-..+...+ ...|. .|... ..+++||
T Consensus 118 ~--~-~~---~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~----l~~Pn-----glavd-~~~~~lY 181 (318)
T 3sov_A 118 W--Q-EL---DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE----IYWPN-----GLTLD-YEEQKLY 181 (318)
T ss_dssp C--S-SC---SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS----CSCEE-----EEEEE-TTTTEEE
T ss_pred e--C-CC---CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC----CCCcc-----EEEEe-ccCCEEE
Confidence 0 0 01 12235555 4899998743 467999998643222211000 00233 23322 1378899
Q ss_pred EEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCce
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
++.. ....|..+.++ ++ -..+..- .+ ......+..++.+|+.....+.|..+|..+++-
T Consensus 182 ~aD~-----~~~~I~~~d~d--G~~~~~~~~~-------~~------~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 182 WADA-----KLNFIHKSNLD--GTNRQAVVKG-------SL------PHPFALTLFEDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EEET-----TTTEEEEEETT--SCSCEEEECS-------CC------SCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred EEEC-----CCCEEEEEcCC--CCceEEEecC-------CC------CCceEEEEeCCEEEEEecCCCeEEEEECCCCCc
Confidence 9875 23455555544 33 2222110 00 112223335778888876667899999976643
No 119
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=71.07 E-value=39 Score=30.66 Aligned_cols=122 Identities=11% Similarity=0.015 Sum_probs=62.8
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeeeccCCCC------ccccccCCCcccccceeeeccCCCeEEEEEeeecCCc--cceE
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDAN------DHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI--STTM 277 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~------~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~--~~~i 277 (372)
+|+++|++.+. .+.++|+.++.-..+. +- +...-..|.+.....+ .. -+++||+.......+. ...-
T Consensus 237 dG~~~~vs~~g-~V~v~d~~~~~~~v~~-~~~~~~~~~~~~g~~p~g~q~~a~-~~--~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 237 AGRLVWPTYTG-KIHQIDLSSGDAKFLP-AVEALTEAERADGWRPGGWQQVAY-HR--ALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp TTEEEEEBTTS-EEEEEECTTSSCEECC-CEESSCHHHHHTTEEECSSSCEEE-ET--TTTEEEEEEEECCTTCTTSCEE
T ss_pred CCcEEEEeCCC-EEEEEECCCCcceeec-ceeccccccccccccCCCcceeeE-CC--CCCeEEEEeccccccccCCCCC
Confidence 78888877654 5899998765422211 10 0000001222111111 11 3678999765221111 1235
Q ss_pred EEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEe-eCC-EEEEEeecCCeEEEEECCCCceEE
Q 017381 278 KLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQG-MICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 278 ~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~-~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
+||.+|. .+++.+.+++... + .. -..+. ++. ++|......+.|.+||..+++..+
T Consensus 312 ~V~viD~-~t~kv~~~i~vg~-----~-----~~-~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 312 FVVVLDA-KTGERLAKFEMGH-----E-----ID-SINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEEEET-TTCCEEEEEEEEE-----E-----EC-EEEECSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEEEC-CCCeEEEEEECCC-----C-----cc-eEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 7888874 3355555554221 0 01 12333 333 577777667889999999987643
No 120
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=71.03 E-value=50 Score=28.35 Aligned_cols=189 Identities=10% Similarity=-0.073 Sum_probs=88.8
Q ss_pred CceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccc--c-
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILS--Q- 196 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~--~- 196 (372)
.+.+.++|+.+++....-+... ....+++.+.+. ++++... ....+.+||..+++-...- ..+....+ .
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~--~l~v~~~--~~~~v~~~d~~~~~~~~~~--~~~~~~~~~~~~ 139 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHNDL--KPFGATINNTTQ--TLWFGNT--VNSAVTAIDAKTGEVKGRL--VLDDRKRTEEVR 139 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEESS--CCCSEEEETTTT--EEEEEET--TTTEEEEEETTTCCEEEEE--ESCCCCCCSSCC
T ss_pred CccEEEEcCCCCeEEEEEecCC--CcceEEECCCCC--EEEEEec--CCCEEEEEeCCCCeeEEEE--ecCCCccccccC
Confidence 4689999999987533222111 123445554332 3444433 2357899999887632111 11100000 0
Q ss_pred CCCcccEEE--CC-EEEEeee-CCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe-EEEEEeeecC
Q 017381 197 SSHQEGVFY--KG-SLYFTTP-EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRN 271 (372)
Q Consensus 197 ~~~~~~v~~--~G-~~y~~~~-~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~vv~~~~~~ 271 (372)
......+.+ +| .+|+... ....|..+|+.+.+-.... + .... ....+... -+|+ |++...
T Consensus 140 ~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~-~-------~~~~-~~~~~~~s--~dg~~l~~~~~---- 204 (353)
T 3vgz_A 140 PLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI-Q-------NTGK-MSTGLALD--SEGKRLYTTNA---- 204 (353)
T ss_dssp CCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE-C-------CCCT-TCCCCEEE--TTTTEEEEECT----
T ss_pred CCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe-c-------CCCC-ccceEEEC--CCCCEEEEEcC----
Confidence 000122333 45 4666553 3456999999877654321 1 1111 11112111 4555 444422
Q ss_pred CccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCce-EEEEe-eCCEEEEEeecCCeEEEEECCCCceEE
Q 017381 272 GISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDH-VYCFW-HQGMICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 272 ~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~-~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
...+.+|.+..... +. + ..+.. . ..... -..+. .++.+|+.....+.|.+||+++++...
T Consensus 205 --~~~i~~~d~~~~~~~~~-~-~~~~~------~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 205 --DGELITIDTADNKILSR-K-KLLDD------G---KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp --TSEEEEEETTTTEEEEE-E-ECCCS------S---SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred --CCeEEEEECCCCeEEEE-E-EcCCC------C---CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 24566665432111 22 1 11100 0 00011 11222 466788887666789999999987654
No 121
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=69.63 E-value=47 Score=27.57 Aligned_cols=112 Identities=5% Similarity=-0.057 Sum_probs=61.2
Q ss_pred EEecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 106 LSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 106 ~~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
+...+|.+++.....+.+.++|+.......+-.... .....+++++..+ ++++.........+++++.....=+...
T Consensus 86 ~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~-~~P~~i~vd~~~g--~lyv~~~~~~~~~I~~~~~dg~~~~~~~ 162 (267)
T 1npe_A 86 LDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGL-VNPRGIVTDPVRG--NLYWTDWNRDNPKIETSHMDGTNRRILA 162 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC-SSEEEEEEETTTT--EEEEEECCSSSCEEEEEETTSCCCEEEE
T ss_pred EEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCC-CCccEEEEeeCCC--EEEEEECCCCCcEEEEEecCCCCcEEEE
Confidence 344567777776556789999987554333322111 1123556654322 5665543222357777876543222221
Q ss_pred cCCCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCe
Q 017381 186 IDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGI 228 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~ 228 (372)
... + ....++.+ ++.+||.......|.+||+....
T Consensus 163 --~~~---~---~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 163 --QDN---L---GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp --CTT---C---SCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred --ECC---C---CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 000 1 12234554 46899988777789999997543
No 122
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=69.27 E-value=51 Score=27.85 Aligned_cols=201 Identities=8% Similarity=0.048 Sum_probs=91.0
Q ss_pred cEEEEecCCCceEEEEeccccceeccCCCCC-CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCC-CccccccCC
Q 017381 111 GLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ-SWSKFDIDG 188 (372)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~-~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~-~W~~~~~~~ 188 (372)
|-+++.+..++.+.+||..++++..+..... ......+.+.+.... ++++.++ ....+.+||..++ .+.......
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~ 143 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVAS--SDGKVSVVEFKENGTTSPIIIDA 143 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEE--TTSEEEEEEBCSSSCBCCEEEEC
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEE--CCCcEEEEEecCCCceeeeeeec
Confidence 5333333346899999999887654432211 111223444332111 2333333 3457888988765 332211000
Q ss_pred CCccccccCCCcccEEE---------------CCEEEEeeeCCcEEEEEecCCCe--eeccCCCCccccccCCCcccc-c
Q 017381 189 FPSMILSQSSHQEGVFY---------------KGSLYFTTPEPFSIVRFDLENGI--WETPNDANDHMTMMLPHELTF-F 250 (372)
Q Consensus 189 ~p~~~~~~~~~~~~v~~---------------~G~~y~~~~~~~~i~~yD~~~~~--w~~i~~p~~~~~~~~p~~~~~-~ 250 (372)
... ....+.. +|.....++....|..+|+.+.+ +.... . +...... .
T Consensus 144 h~~-------~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~-~-------l~~H~~~V~ 208 (297)
T 2pm7_B 144 HAI-------GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES-T-------LEGHSDWVR 208 (297)
T ss_dssp CSS-------CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEE-E-------ECCCSSCEE
T ss_pred ccC-------ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEE-E-------ecCCCCceE
Confidence 000 0001111 24455556655668888876532 32211 0 1111110 1
Q ss_pred ceeeeccCC---CeEEEEEeeecCCccceEEEEEEcCCC-CEEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEEEE
Q 017381 251 RLVNDGEES---NKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICV 324 (372)
Q Consensus 251 ~lv~e~~~~---g~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~ 324 (372)
.+.-. -+ +++++.+. ....+.||.++... .|......... ....+..+ ..++..++
T Consensus 209 ~v~~s--p~~~~~~~las~s-----~D~~v~iWd~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~s~~g~~la 270 (297)
T 2pm7_B 209 DVAWS--PTVLLRSYMASVS-----QDRTCIIWTQDNEQGPWKKTLLKEEK-----------FPDVLWRASWSLSGNVLA 270 (297)
T ss_dssp EEEEC--CCCSSSEEEEEEE-----TTSCEEEEEESSTTSCCEEEESSSSC-----------CSSCEEEEEECSSSCCEE
T ss_pred EEEEC--CCCCCceEEEEEE-----CCCcEEEEEeCCCCCccceeeeeccc-----------CCCcEEEEEECCCCCEEE
Confidence 12111 23 35555443 23579999987543 37643210000 01123222 23344444
Q ss_pred EeecCCeEEEEECC-CCceEECCC
Q 017381 325 CCYTWPEILYYNVA-RRTWHWLPS 347 (372)
Q Consensus 325 ~~~~~~~v~~yd~~-~~~w~~v~~ 347 (372)
.....+.|.+|+.. .++|+.+..
T Consensus 271 s~~~D~~v~lw~~~~~g~w~~~~~ 294 (297)
T 2pm7_B 271 LSGGDNKVTLWKENLEGKWEPAGE 294 (297)
T ss_dssp EEETTSCEEEEEECTTSCEEEC--
T ss_pred EEcCCCcEEEEEECCCCcEEeccc
Confidence 44455678999987 568887653
No 123
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=68.53 E-value=53 Score=27.66 Aligned_cols=186 Identities=11% Similarity=0.027 Sum_probs=94.0
Q ss_pred CCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCC
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (372)
..+.+.++||.++ ...+.... ....++++++.+ ++++... ....+.+|+..+++.+... .... .... .
T Consensus 48 ~~~~i~~~~~~~~-~~~~~~~~--~~~~~l~~~~dg---~l~v~~~--~~~~i~~~d~~~g~~~~~~--~~~~-~~~~-~ 115 (296)
T 3e5z_A 48 RQNRTWAWSDDGQ-LSPEMHPS--HHQNGHCLNKQG---HLIACSH--GLRRLERQREPGGEWESIA--DSFE-GKKL-N 115 (296)
T ss_dssp GGTEEEEEETTSC-EEEEESSC--SSEEEEEECTTC---CEEEEET--TTTEEEEECSTTCCEEEEE--CEET-TEEC-C
T ss_pred CCCEEEEEECCCC-eEEEECCC--CCcceeeECCCC---cEEEEec--CCCeEEEEcCCCCcEEEEe--eccC-CCCC-C
Confidence 3468899999988 55443221 112244444332 3444332 2357899999888776553 1111 0000 1
Q ss_pred CcccEEE--CCEEEEeee-----------------CCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCC
Q 017381 199 HQEGVFY--KGSLYFTTP-----------------EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEES 259 (372)
Q Consensus 199 ~~~~v~~--~G~~y~~~~-----------------~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~ 259 (372)
....+.+ +|.+|+... ....|..||.. .+...+.... ..|. .+... -+
T Consensus 116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~-----~~~~-----gi~~s--~d 182 (296)
T 3e5z_A 116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR-----VKPN-----GLAFL--PS 182 (296)
T ss_dssp CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC-----SSEE-----EEEEC--TT
T ss_pred CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC-----CCCc-----cEEEC--CC
Confidence 1123333 688887521 12368888876 4444332110 0122 22212 57
Q ss_pred CeEEEEEeeecCCccceEEEEEEcCCCCE-EEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECC
Q 017381 260 NKLYLIGGVGRNGISTTMKLWELGCGGNW-IEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVA 338 (372)
Q Consensus 260 g~L~vv~~~~~~~~~~~i~vw~l~~~~~W-~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~ 338 (372)
|+++ +.. .....+.+|.++..++. .....+. . . .....-.++..++.+++.. .+.|.+||++
T Consensus 183 g~~l-v~~----~~~~~i~~~~~~~~g~~~~~~~~~~-~------~---~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 183 GNLL-VSD----TGDNATHRYCLNARGETEYQGVHFT-V------E---PGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp SCEE-EEE----TTTTEEEEEEECSSSCEEEEEEEEC-C------S---SSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred CCEE-EEe----CCCCeEEEEEECCCCcCcCCCeEee-C------C---CCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 8876 433 12357888888645555 3322221 0 0 0011122444456688877 5789999998
Q ss_pred CCceEECC
Q 017381 339 RRTWHWLP 346 (372)
Q Consensus 339 ~~~w~~v~ 346 (372)
.+....+.
T Consensus 246 g~~~~~~~ 253 (296)
T 3e5z_A 246 GDELGRVL 253 (296)
T ss_dssp SCEEEEEE
T ss_pred CCEEEEEE
Confidence 66555544
No 124
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=68.29 E-value=46 Score=31.48 Aligned_cols=104 Identities=12% Similarity=-0.085 Sum_probs=58.6
Q ss_pred EEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeec-CCCceEEEEECCCCCccccccCCCC
Q 017381 112 LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAK-SFPNYAFVYDSTDQSWSKFDIDGFP 190 (372)
Q Consensus 112 ll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~-~~~~~~~vy~s~~~~W~~~~~~~~p 190 (372)
+++.... .+...+||..+++.+.+...+. ..+.+.+.+. .++..... .....++++|..++.++.+. ..+
T Consensus 124 ~~~~s~~-~~~~~l~d~~~g~~~~l~~~~~----~~~~~spDG~--~la~~~~~~~~~~~i~~~d~~~g~~~~l~--~~~ 194 (582)
T 3o4h_A 124 VVFTGAT-EDRVALYALDGGGLRELARLPG----FGFVSDIRGD--LIAGLGFFGGGRVSLFTSNLSSGGLRVFD--SGE 194 (582)
T ss_dssp EEEEEEC-SSCEEEEEEETTEEEEEEEESS----CEEEEEEETT--EEEEEEEEETTEEEEEEEETTTCCCEEEC--CSS
T ss_pred EEEEecC-CCCceEEEccCCcEEEeecCCC----ceEEECCCCC--EEEEEEEcCCCCeEEEEEcCCCCCceEee--cCC
Confidence 5555443 3455699999998777654322 3444554433 34433332 22256889999999887665 222
Q ss_pred ccccccCCCcccEEE-CCEEEEeeeCC--cEEEEEecCCCeee
Q 017381 191 SMILSQSSHQEGVFY-KGSLYFTTPEP--FSIVRFDLENGIWE 230 (372)
Q Consensus 191 ~~~~~~~~~~~~v~~-~G~~y~~~~~~--~~i~~yD~~~~~w~ 230 (372)
. .....++. +|+..+..... ..|..+|+.+.+..
T Consensus 195 ~------~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 195 G------SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp C------EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred C------ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 1 01112222 56554444333 36899999887766
No 125
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=68.28 E-value=56 Score=27.85 Aligned_cols=194 Identities=8% Similarity=-0.069 Sum_probs=90.6
Q ss_pred EEecCCCceEEEEec-cccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC-------ccccc
Q 017381 114 CFSLPSSSSFLVCNL-VTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-------WSKFD 185 (372)
Q Consensus 114 ~~~~~~~~~~~v~NP-~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~-------W~~~~ 185 (372)
++.+..++.+.+||. .+++...+...........+.+.+ .. .++ .++ ....+.+||..+.. .+...
T Consensus 72 l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~--~~-~l~-s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~ 145 (342)
T 1yfq_A 72 IYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG--DD-KLI-AAS--WDGLIEVIDPRNYGDGVIAVKNLNSN 145 (342)
T ss_dssp EEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET--TT-EEE-EEE--TTSEEEEECHHHHTTBCEEEEESCSS
T ss_pred EEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC--CC-EEE-EEc--CCCeEEEEcccccccccccccCCeee
Confidence 333334678999999 888876655421112223444444 22 333 332 23578888776400 11121
Q ss_pred cCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCC-Ce--eeccCCCCccccccCCCcccccceeeeccC-CCe
Q 017381 186 IDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLEN-GI--WETPNDANDHMTMMLPHELTFFRLVNDGEE-SNK 261 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~-~~--w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~-~g~ 261 (372)
.+. .......+.+++.-.+.+.....+..||+.+ .. ......+ .+... ..+... - +|+
T Consensus 146 --~~~-----~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-------~~~~i--~~i~~~--~~~~~ 207 (342)
T 1yfq_A 146 --NTK-----VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESG-------LKYQI--RDVALL--PKEQE 207 (342)
T ss_dssp --SSS-----SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECS-------CSSCE--EEEEEC--SGGGC
T ss_pred --EEe-----eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecC-------CCCce--eEEEEC--CCCCC
Confidence 111 1111123333333344455555799999887 32 2222111 11111 222211 3 677
Q ss_pred EEEEEeeecCCccceEEEEEEcCC-----CC--EEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEEEEEeecCCeE
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCG-----GN--WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEI 332 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~-----~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v 332 (372)
+++++.. ...+.+|.++.. .. .+....-... . .......+.++ ..++..++.+...+.|
T Consensus 208 ~l~~~~~-----dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 275 (342)
T 1yfq_A 208 GYACSSI-----DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL------K-DTNLAYPVNSIEFSPRHKFLYTAGSDGII 275 (342)
T ss_dssp EEEEEET-----TSEEEEEECCTTCCSTTCTTCEEEECCCCCT------T-CCSSCCCEEEEEECTTTCCEEEEETTSCE
T ss_pred EEEEEec-----CCcEEEEEEcCCCcccccccceeeecccccc------c-ccccceeEEEEEEcCCCCEEEEecCCceE
Confidence 7777652 357899998765 12 3221110000 0 00001123333 2234444455456789
Q ss_pred EEEECCCCceE
Q 017381 333 LYYNVARRTWH 343 (372)
Q Consensus 333 ~~yd~~~~~w~ 343 (372)
.+||+++++..
T Consensus 276 ~vwd~~~~~~~ 286 (342)
T 1yfq_A 276 SCWNLQTRKKI 286 (342)
T ss_dssp EEEETTTTEEE
T ss_pred EEEcCccHhHh
Confidence 99999987643
No 126
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=67.80 E-value=58 Score=27.86 Aligned_cols=148 Identities=9% Similarity=0.048 Sum_probs=76.2
Q ss_pred EEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccEEE--CCEEEEeeeCC----cEEEEEecCCCeeec
Q 017381 158 KIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEP----FSIVRFDLENGIWET 231 (372)
Q Consensus 158 kvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~----~~i~~yD~~~~~w~~ 231 (372)
++++.+. ....+.+|+..+++.+... ..+. ....++.. +|.+|+..... ..|..||+.+.+...
T Consensus 57 ~l~~~~~--~~~~i~~~d~~~~~~~~~~--~~~~------~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 57 QLFLLDV--FEGNIFKINPETKEIKRPF--VSHK------ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp CEEEEET--TTCEEEEECTTTCCEEEEE--ECSS------SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred CEEEEEC--CCCEEEEEeCCCCcEEEEe--eCCC------CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 3554432 2347888998888776543 1011 11123333 57877765443 479999998776653
Q ss_pred cCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCC-CEEEEEe-cChHHHHHhhhhccCC
Q 017381 232 PNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGG-NWIEVER-VPEMMCRKFMSVCYHN 309 (372)
Q Consensus 232 i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~-lp~~~~~~~~~~~~~~ 309 (372)
+... .+.......+... -+|++++...... .......||.++..+ +...+.. ..
T Consensus 127 ~~~~-------~~~~~~~~~i~~d--~~g~l~v~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~-------------- 182 (333)
T 2dg1_A 127 IIED-------LSTAYCIDDMVFD--SKGGFYFTDFRGY-STNPLGGVYYVSPDFRTVTPIIQNIS-------------- 182 (333)
T ss_dssp EECS-------SSSCCCEEEEEEC--TTSCEEEEECCCB-TTBCCEEEEEECTTSCCEEEEEEEES--------------
T ss_pred EEcc-------CccCCcccceEEC--CCCCEEEEecccc-ccCCCceEEEEeCCCCEEEEeecCCC--------------
Confidence 2111 1111111223323 5788888654210 112245788888664 4443321 10
Q ss_pred CceEEEEe-eCCEEEEEeecCCeEEEEECCC
Q 017381 310 YDHVYCFW-HQGMICVCCYTWPEILYYNVAR 339 (372)
Q Consensus 310 ~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~ 339 (372)
.....++. +++.+|+.....+.|.+||+++
T Consensus 183 ~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 183 VANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 01112233 3345777765556789999864
No 127
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=67.37 E-value=94 Score=30.13 Aligned_cols=95 Identities=15% Similarity=0.010 Sum_probs=51.8
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCc
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQ 200 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~ 200 (372)
..+...+..+.....+-+.+.-....+++++...+ +|++... ....+..++......+.+. ... + ...
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~--~lywtD~--~~~~I~r~~~~g~~~~~v~--~~g---~---~~P 82 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEASALDFDVTDN--RIYWTDI--SLKTISRAFMNGSALEHVV--EFG---L---DYP 82 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTT--EEEEEET--TTTEEEEEETTSCSCEEEE--CSS---C---SCC
T ss_pred CcEEEEECCCCCcceEEEcCCCCceEEEEEECCCC--EEEEEEC--CCCeEEEEECCCCCcEEEE--eCC---C---CCc
Confidence 44555566554433222222112234555654332 6777643 3357777877665554432 110 1 123
Q ss_pred ccEEE---CCEEEEeeeCCcEEEEEecCCC
Q 017381 201 EGVFY---KGSLYFTTPEPFSIVRFDLENG 227 (372)
Q Consensus 201 ~~v~~---~G~~y~~~~~~~~i~~yD~~~~ 227 (372)
.++++ +|.+||.......|.++|+...
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 46666 4899999877778999998754
No 128
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=67.21 E-value=62 Score=27.97 Aligned_cols=155 Identities=12% Similarity=0.134 Sum_probs=77.1
Q ss_pred CcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCC
Q 017381 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGF 189 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~ 189 (372)
+|-.++....++.+.+||..+++...+-..........+++.+.+ ++++.++ ....+.+||.+++.-.... +
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg---~~lasg~--~dg~i~iwd~~~~~~~~~~---~ 209 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS---LLLALYS--PDGILDVYNLSSPDQASSR---F 209 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS---CEEEEEC--TTSCEEEEESSCTTSCCEE---C
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC---CEEEEEc--CCCEEEEEECCCCCCCccE---E
Confidence 443333333467899999998886443222212122344444322 4555554 3457899999876432111 1
Q ss_pred CccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeee-ccCCCCccccccCCCc-cc-c-cceeeeccCCCeEE
Q 017381 190 PSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWE-TPNDANDHMTMMLPHE-LT-F-FRLVNDGEESNKLY 263 (372)
Q Consensus 190 p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~-~i~~p~~~~~~~~p~~-~~-~-~~lv~e~~~~g~L~ 263 (372)
.. .+...-..+.+ +|.....+.+. .|..+|+.+.+-. .+. + +... .. . ..+.-. -+|+.+
T Consensus 210 ~~---~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~--~~g~~l 275 (343)
T 3lrv_A 210 PV---DEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYP-T-------YTIPEFKTGTVTYDID--DSGKNM 275 (343)
T ss_dssp CC---CTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSC-C-------CBC-----CCEEEEEC--TTSSEE
T ss_pred ec---cCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeec-c-------cccccccccceEEEEC--CCCCEE
Confidence 00 00011122333 45555555544 7999999865322 111 1 1000 00 0 112212 468777
Q ss_pred EEEeeecCCccceEEEEEEcCCCC-EEE
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGN-WIE 290 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~-W~~ 290 (372)
+++.. ....+.||.++.... |..
T Consensus 276 ~~~s~----~d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 276 IAYSN----ESNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp EEEET----TTTEEEEEEECTTTCSEEE
T ss_pred EEecC----CCCcEEEEEEcccccceEe
Confidence 76541 135799999976655 987
No 129
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=66.46 E-value=98 Score=30.01 Aligned_cols=190 Identities=11% Similarity=-0.076 Sum_probs=101.5
Q ss_pred EecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
...+|.|+......+.+..+++.......+-.... ....+++++..++ ++++... ....+++++.... .+..-.
T Consensus 45 d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~-~~P~GlAvD~~~~--~LY~tD~--~~~~I~v~~~dG~-~~~~l~ 118 (628)
T 4a0p_A 45 DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGL-DYPEGMAVDWLGK--NLYWADT--GTNRIEVSKLDGQ-HRQVLV 118 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTT--EEEEEET--TTTEEEEEETTST-TCEEEE
T ss_pred ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCC-CCcceEEEEeCCC--EEEEEEC--CCCEEEEEecCCC-cEEEEE
Confidence 44577888876666788888887655444332221 1224677764333 6777543 3468889988643 222210
Q ss_pred CCCCccccccCCCcccEEE---CCEEEEeeeC-CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeE
Q 017381 187 DGFPSMILSQSSHQEGVFY---KGSLYFTTPE-PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKL 262 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~-~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L 262 (372)
. . .+ ..-.++++ +|.+||.... ...|..+++....-..+.... ..|.+ |..+ ..+++|
T Consensus 119 -~--~-~l---~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~-----~~P~G-----lalD-~~~~~L 180 (628)
T 4a0p_A 119 -W--K-DL---DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNV-----GRANG-----LTID-YAKRRL 180 (628)
T ss_dssp -C--S-SC---CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSC-----SSEEE-----EEEE-TTTTEE
T ss_pred -e--C-CC---CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCC-----CCcce-----EEEc-cccCEE
Confidence 0 0 11 11234554 5899998743 457888888754433321110 02332 3322 136889
Q ss_pred EEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (372)
|++... ...|....++.... +.+..- + .........++.||+.....+.|...|..++
T Consensus 181 Y~aD~~-----~~~I~~~d~dG~~~-~v~~~~--------l------~~P~glav~~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 181 YWTDLD-----TNLIESSNMLGLNR-EVIADD--------L------PHPFGLTQYQDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EEEETT-----TTEEEEEETTSCSC-EEEEEC--------C------SCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEECC-----CCEEEEEcCCCCce-EEeecc--------C------CCceEEEEECCEEEEecCCCCEEEEEECCCC
Confidence 998752 24555554443222 212110 0 0122233356788888766678888887665
No 130
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=66.37 E-value=93 Score=29.69 Aligned_cols=112 Identities=13% Similarity=0.076 Sum_probs=62.3
Q ss_pred cCcEEEEecCCCceEEEEec-cccc--eeccCCCCCC-C-------CceeEEEEeCCCCEEEEEEeecCCCceEEEEECC
Q 017381 109 SKGLLCFSLPSSSSFLVCNL-VTLS--SRTIDFPTYP-F-------DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDST 177 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP-~t~~--~~~lP~~~~~-~-------~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~ 177 (372)
.+|.|++.....+.++.+|+ .|++ |+.-+..... . .....++... +|++... ...+..+|.+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~v~~~---dg~l~alD~~ 133 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAG----QIVKKQA---NGHLLALDAK 133 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETT----EEEEECT---TSEEEEEETT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECC----EEEEEeC---CCEEEEEECC
Confidence 47777666532467888999 8888 5443222110 0 0012233221 5555432 3578888988
Q ss_pred CCC--ccccccCCCCccccccCCCcccEEECCEEEEeeeC-----CcEEEEEecCCC--eeec
Q 017381 178 DQS--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENG--IWET 231 (372)
Q Consensus 178 ~~~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~-----~~~i~~yD~~~~--~w~~ 231 (372)
+++ |+... .-+. ........++..+|.+|+-... ...+.+||.++. .|+.
T Consensus 134 tG~~~W~~~~--~~~~--~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 134 TGKINWEVEV--CDPK--VGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TCCEEEEEEC--CCGG--GTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCCEEEEecC--CCCC--ccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 774 87543 1111 0011234567789999876542 357999999754 5654
No 131
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=65.58 E-value=60 Score=27.23 Aligned_cols=140 Identities=7% Similarity=-0.023 Sum_probs=61.5
Q ss_pred CCceEEEEeccccceeccCCCCCC-CC--ceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccc
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTYP-FD--FELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILS 195 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~~-~~--~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~ 195 (372)
.++.+.+||..+++-......... .. ...+...+... .++.+........+.+++.....-.... ....
T Consensus 170 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~i~lwd~~~~~~~~~~--~~~~---- 241 (318)
T 4ggc_A 170 NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS--NVLATGGGTSDRHIRIWNVCSGACLSAV--DAHS---- 241 (318)
T ss_dssp TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST--TEEEEEECTTTCEEEEEETTTCCEEEEE--ECSS----
T ss_pred cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC--cEEEEEecCCCCEEEEEecccccccccc--ccee----
Confidence 356788999888764322211111 11 11222222222 2333333334457788887765433222 0000
Q ss_pred cCCCcccEEE-CC-EEEEeee-CCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCC
Q 017381 196 QSSHQEGVFY-KG-SLYFTTP-EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNG 272 (372)
Q Consensus 196 ~~~~~~~v~~-~G-~~y~~~~-~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~ 272 (372)
......+. ++ .+...++ ....|..||+.+.+-.... .+ ..... ..+... -+|++++.++
T Consensus 242 --~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l-~g------H~~~V--~~l~~s--pdg~~l~S~s----- 303 (318)
T 4ggc_A 242 --QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KG------HTSRV--LSLTMS--PDGATVASAA----- 303 (318)
T ss_dssp --CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CC------CSSCE--EEEEEC--TTSSCEEEEE-----
T ss_pred --eeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEE-cC------CCCCE--EEEEEc--CCCCEEEEEe-----
Confidence 00111122 23 3332222 3456889998765432211 10 11111 122211 4677666554
Q ss_pred ccceEEEEEEcC
Q 017381 273 ISTTMKLWELGC 284 (372)
Q Consensus 273 ~~~~i~vw~l~~ 284 (372)
...++.||.+.+
T Consensus 304 ~D~~v~iWd~~~ 315 (318)
T 4ggc_A 304 ADETLRLWRCFE 315 (318)
T ss_dssp TTTEEEEECCSC
T ss_pred cCCeEEEEECCC
Confidence 135799998743
No 132
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=65.52 E-value=78 Score=28.53 Aligned_cols=193 Identities=13% Similarity=0.032 Sum_probs=96.3
Q ss_pred ecCcEEEEecCCCceEEEEeccccc----eeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLS----SRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~----~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~ 183 (372)
..+|.|+......+.+..+++.... ...+.... .....+++++...+ +|++... ....+++++.....-+.
T Consensus 121 ~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~-~~~p~glavD~~~~--~lY~~d~--~~~~I~~~~~~g~~~~~ 195 (400)
T 3p5b_L 121 VASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD-IQAPDGLAVDWIHS--NIYWTDS--VLGTVSVADTKGVKRKT 195 (400)
T ss_dssp TTTTEEEEEETTTTEEEEEEC------CCCEEEECSS-CSCEEEEEEETTTT--EEEEEET--TTTEEEEECTTTCSEEE
T ss_pred eccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC-CCCcccEEEEecCC--ceEEEEC--CCCeEEEEeCCCCceEE
Confidence 3467777766555678888876522 22221111 11223566664333 6776543 33578888877654333
Q ss_pred cccCCCCccccccCCCcccEEE---CCEEEEeeeC-CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCC
Q 017381 184 FDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPE-PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEES 259 (372)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~-~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~ 259 (372)
+.... + ..-.++.+ +|.+||.... ...|..+|+....-..+...+ ...|.+ |... ..+
T Consensus 196 l~~~~-----~---~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~----l~~P~g-----lavd-~~~ 257 (400)
T 3p5b_L 196 LFREN-----G---SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN----IQWPNG-----ITLD-LLS 257 (400)
T ss_dssp EEECS-----S---CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSS----CSCEEE-----EEEE-TTT
T ss_pred EEeCC-----C---CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECC----CCceEE-----EEEE-eCC
Confidence 32000 1 11234555 5899998754 356888988743322221000 002332 3321 147
Q ss_pred CeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCC
Q 017381 260 NKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVAR 339 (372)
Q Consensus 260 g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~ 339 (372)
++||++... ...|.+..++.....+.+.. +.. + .........++.||+.....+.|..+|..+
T Consensus 258 ~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~-~~~-----l------~~P~gl~v~~~~lywtd~~~~~V~~~~~~~ 320 (400)
T 3p5b_L 258 GRLYWVDSK-----LHSISSIDVNGGNRKTILED-EKR-----L------AHPFSLAVFEDKVFWTDIINEAIFSANRLT 320 (400)
T ss_dssp TEEEEEETT-----TTEEEEEETTSCCCEEEEEC-SST-----T------SSEEEEEEETTEEEEEESSSCSEEEEESSS
T ss_pred CEEEEEECC-----CCEEEEEeCCCCccEEEEeC-CCC-----C------CCCEEEEEeCCEEEEecCCCCeEEEEEcCC
Confidence 889998652 34555555442222443321 100 0 012223336778888886667889999766
Q ss_pred C
Q 017381 340 R 340 (372)
Q Consensus 340 ~ 340 (372)
+
T Consensus 321 G 321 (400)
T 3p5b_L 321 G 321 (400)
T ss_dssp C
T ss_pred C
Confidence 5
No 133
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=65.34 E-value=40 Score=30.88 Aligned_cols=109 Identities=8% Similarity=0.089 Sum_probs=59.9
Q ss_pred CEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe-EEEEEeeecCCccceEEEEEEcCC
Q 017381 207 GSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCG 285 (372)
Q Consensus 207 G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~vv~~~~~~~~~~~i~vw~l~~~ 285 (372)
|.+|+.... ..|..||+.+++...+..... .|. .+... .+|+ ||+..... . .....+..++.+
T Consensus 150 g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~-----~P~-----~ia~d--~~G~~lyvad~~~--~-~~~~~v~~~~~~ 213 (430)
T 3tc9_A 150 NHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLS-----KVR-----TICWT--HEADSMIITNDQN--N-NDRPNNYILTRE 213 (430)
T ss_dssp EEEEEEEBT-EEEEEEETTTTEEEEEECCCS-----CEE-----EEEEC--TTSSEEEEEECCS--C-TTSEEEEEEEGG
T ss_pred CeEEEEeCC-CcEEEEECCCCEEEEEecCCC-----Ccc-----eEEEe--CCCCEEEEEeCCC--C-cccceEEEEeCC
Confidence 789988765 679999999887766431100 122 23222 4666 88876521 1 112234444445
Q ss_pred CCEEEEEecChHHHHHhhhhccCCCceEEEEee-CCEEEEEeecCCeEEEEECCCCce
Q 017381 286 GNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWH-QGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 286 ~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
+.|.....++. + .... -.++.. ++.||+.....+.|..||+.+++.
T Consensus 214 g~~~~~~~l~~-----~-----~~p~-giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 214 SGFKVITELTK-----G-----QNCN-GAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp GTSCSEEEEEE-----C-----SSCC-CEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred Cceeeeeeecc-----C-----CCce-EEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 54432222210 0 0111 123333 677899887677899999998765
No 134
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=65.20 E-value=83 Score=28.72 Aligned_cols=208 Identities=8% Similarity=-0.005 Sum_probs=102.5
Q ss_pred cCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCC--CceEEEEECCCCCcccccc
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF--PNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~--~~~~~vy~s~~~~W~~~~~ 186 (372)
.+|.|++.... ..+.++|+.+++...+.... ..-.+++++..++ .+++...... ...+.+++. .+.|....
T Consensus 148 ~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~--~~P~~ia~d~~G~--~lyvad~~~~~~~~~v~~~~~-~g~~~~~~- 220 (430)
T 3tc9_A 148 NHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGL--SKVRTICWTHEAD--SMIITNDQNNNDRPNNYILTR-ESGFKVIT- 220 (430)
T ss_dssp EEEEEEEEEBT-EEEEEEETTTTEEEEEECCC--SCEEEEEECTTSS--EEEEEECCSCTTSEEEEEEEG-GGTSCSEE-
T ss_pred CCCeEEEEeCC-CcEEEEECCCCEEEEEecCC--CCcceEEEeCCCC--EEEEEeCCCCcccceEEEEeC-CCceeeee-
Confidence 45766665543 78899999988876654311 1123455554332 4666554322 224555554 34454222
Q ss_pred CCCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe-E
Q 017381 187 DGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-L 262 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L 262 (372)
.++ ......++.+ +|.+|+.......|..||+.+.....+. . .+.......+... -+|+ |
T Consensus 221 -~l~-----~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~-~-------~~~~~~P~gia~~--pdG~~l 284 (430)
T 3tc9_A 221 -ELT-----KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF-T-------IQDSGWEFHIQFH--PSGNYA 284 (430)
T ss_dssp -EEE-----ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE-E-------CSSSSCCEEEEEC--TTSSEE
T ss_pred -eec-----cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-E-------cCCCCcceeEEEc--CCCCEE
Confidence 111 1112234555 6899988766667999999876552221 0 1111111123322 4676 8
Q ss_pred EEEEeeecCCccceEEEEEEcCCCC-E---EEEEecChH-HHHHhhhhccCCCceE--EEEe---------eCCEEEEEe
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGN-W---IEVERVPEM-MCRKFMSVCYHNYDHV--YCFW---------HQGMICVCC 326 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~-W---~~v~~lp~~-~~~~~~~~~~~~~~~~--~~~~---------~~~~i~~~~ 326 (372)
|++.. ....|.++.++.... . ..+...+.. -+.+-.... ...... .++. .++.||+..
T Consensus 285 yv~d~-----~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~-a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD 358 (430)
T 3tc9_A 285 YIVVV-----NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKK-ARMHAPRQGTFVKNPAYKGSSDEYDFYFCD 358 (430)
T ss_dssp EEEET-----TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGG-CBBSSEEEEEEEECGGGTTSSCCEEEEEEE
T ss_pred EEEEC-----CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcc-eEeCCCcceEEEccccccccCCCCeEEEEE
Confidence 88764 235666666654321 1 112111100 000000000 001111 2222 235799998
Q ss_pred ecCCeEEEEECCCCceEECC
Q 017381 327 YTWPEILYYNVARRTWHWLP 346 (372)
Q Consensus 327 ~~~~~v~~yd~~~~~w~~v~ 346 (372)
...+.|..+|. +++...+.
T Consensus 359 ~~n~~I~~i~~-~G~v~~~~ 377 (430)
T 3tc9_A 359 RENHCIRILTP-QGRVTTFA 377 (430)
T ss_dssp GGGTEEEEECT-TSEEEEEE
T ss_pred CCCcEEEEECC-CCcEEEEE
Confidence 77778999994 56666654
No 135
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=64.20 E-value=70 Score=27.56 Aligned_cols=206 Identities=9% Similarity=0.067 Sum_probs=96.8
Q ss_pred ecCcEEEEecCCCceEEEEecccc--ceeccCCCC------CCC-CceeEEEEeCCCCEEEEEEeecCCCceEEEEECCC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTL--SSRTIDFPT------YPF-DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD 178 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~--~~~~lP~~~------~~~-~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~ 178 (372)
..+|-+++.....+.+.++|+..+ ....+.... ... .-..+++++.. -++++... .....+.+|+...
T Consensus 99 d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~--g~lyv~d~-~~~~~I~~~~~~g 175 (329)
T 3fvz_A 99 DTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPST--GAVFVSDG-YCNSRIVQFSPSG 175 (329)
T ss_dssp CTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTT--CCEEEEEC-SSCCEEEEECTTS
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCC--CeEEEEeC-CCCCeEEEEcCCC
Confidence 446655665545678999998765 233333211 011 11245554311 24555442 1245788888543
Q ss_pred CCccccccCCCC----ccccccCCCcccEEE--C-CEEEEeeeCCcEEEEEecCCCeeec-cCCCCccccccCCCccccc
Q 017381 179 QSWSKFDIDGFP----SMILSQSSHQEGVFY--K-GSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFF 250 (372)
Q Consensus 179 ~~W~~~~~~~~p----~~~~~~~~~~~~v~~--~-G~~y~~~~~~~~i~~yD~~~~~w~~-i~~p~~~~~~~~p~~~~~~ 250 (372)
..-......... +..+ ..-.++.+ + |.+|+.......|..||+.+.++.. +..+ .......
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~---~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~--------~~~~~~~ 244 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQF---SVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA--------SFGRNVF 244 (329)
T ss_dssp CEEEEECEECCSSSCCTTEE---SCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT--------TTTTCEE
T ss_pred CEEEEeccCCCCCCCCCccc---CCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc--------ccCCCcc
Confidence 322222100000 0011 12235555 4 8999887777789999998665543 2211 0110111
Q ss_pred ceeeeccCCCeEEEEEeeec--CCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec
Q 017381 251 RLVNDGEESNKLYLIGGVGR--NGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT 328 (372)
Q Consensus 251 ~lv~e~~~~g~L~vv~~~~~--~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 328 (372)
.+.. ..|.++...+... +.....+.+|.+. .++.... +.... ..+ ....-.++..++.+|+....
T Consensus 245 ~~~~---~pg~~~~~~g~~~v~~~~~~~v~~~~~~-~g~~~~~--~~~~~--~~~-----~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 245 AISY---IPGFLFAVNGKPYFGDQEPVQGFVMNFS-SGEIIDV--FKPVR--KHF-----DMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp EEEE---ETTEEEEEECCCCTTCSCCCCEEEEETT-TCCEEEE--ECCSS--SCC-----SSEEEEEECTTSEEEEEESS
T ss_pred eeee---cCCEEEEeCCCEEeccCCCcEEEEEEcC-CCeEEEE--EcCCC--Ccc-----CCeeEEEECCCCCEEEEECC
Confidence 1211 2245555443210 1123466777653 3442221 11000 000 00112234455689999877
Q ss_pred CCeEEEEECCCC
Q 017381 329 WPEILYYNVARR 340 (372)
Q Consensus 329 ~~~v~~yd~~~~ 340 (372)
.+.|..||+..+
T Consensus 312 ~~~I~~~~~~~~ 323 (329)
T 3fvz_A 312 TNTVWKFTLTEK 323 (329)
T ss_dssp SCCEEEEEEEEC
T ss_pred CCEEEEEeCCcc
Confidence 788999998653
No 136
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=64.07 E-value=68 Score=27.53 Aligned_cols=129 Identities=11% Similarity=0.097 Sum_probs=66.8
Q ss_pred ceEEEEeccccceeccCC-CCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCC---CccccccCCCCcccccc
Q 017381 121 SSFLVCNLVTLSSRTIDF-PTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ---SWSKFDIDGFPSMILSQ 196 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~-~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~---~W~~~~~~~~p~~~~~~ 196 (372)
+.++++||.+++...+.. ... ..++++++. .-.+++... ....+.+|+..+. ..+... ..+
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~---p~gia~~~d--g~~lyv~d~--~~~~I~~~~~~~~~~~~~~~~~--~~~------ 229 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHV---PGGAEVSAD--SSFVLVAEF--LSHQIVKYWLEGPKKGTAEVLV--KIP------ 229 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESC---CCEEEECTT--SSEEEEEEG--GGTEEEEEESSSTTTTCEEEEE--ECS------
T ss_pred ceEEEEeCCCCEEEEeccCCcc---CcceEECCC--CCEEEEEeC--CCCeEEEEECCCCcCCccceEE--eCC------
Confidence 578999998887654321 111 123444432 223444432 2357888988753 232222 111
Q ss_pred CCCcccEEE--CCEEEEeeeC----------CcEEEEEecCCCeeeccCCCCccccccCCCcc--ccc-ceeeeccCCCe
Q 017381 197 SSHQEGVFY--KGSLYFTTPE----------PFSIVRFDLENGIWETPNDANDHMTMMLPHEL--TFF-RLVNDGEESNK 261 (372)
Q Consensus 197 ~~~~~~v~~--~G~~y~~~~~----------~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~--~~~-~lv~e~~~~g~ 261 (372)
. ..++.+ +|.+|+.... ...|..||+..+....+. .|.+. ... .+. . .+|+
T Consensus 230 -g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~---------~~~g~~~~~~~~~~-~--~~g~ 295 (322)
T 2fp8_A 230 -N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIP---------LPPPFAGEHFEQIQ-E--HDGL 295 (322)
T ss_dssp -S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEE---------CCTTTTTSCCCEEE-E--ETTE
T ss_pred -C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEE---------CCCCCccccceEEE-E--eCCE
Confidence 0 234555 4777665543 245899998765555544 33321 122 233 3 5889
Q ss_pred EEEEEeeecCCccceEEEEEEc
Q 017381 262 LYLIGGVGRNGISTTMKLWELG 283 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~ 283 (372)
||+.+.. ...|.++.++
T Consensus 296 L~v~~~~-----~~~i~~~~~~ 312 (322)
T 2fp8_A 296 LYIGTLF-----HGSVGILVYD 312 (322)
T ss_dssp EEEECSS-----CSEEEEEEC-
T ss_pred EEEeecC-----CCceEEEecc
Confidence 9987542 3456666654
No 137
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=63.98 E-value=1.1e+02 Score=29.63 Aligned_cols=191 Identities=15% Similarity=0.080 Sum_probs=96.5
Q ss_pred EecCcEEEEecCCCceEEEEeccccce-eccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSS-RTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~-~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
...+|.|+......+.+..+++..... ..+-.... ..-.+++++..++ ++++... ....+++++..+. .+..-
T Consensus 48 ~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~-~~P~GlAvD~~~~--~ly~~d~--~~~~I~v~~~dG~-~~~~l 121 (619)
T 3s94_A 48 VFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL-LSPDGLACDWLGE--KLYWTDS--ETNRIEVSNLDGS-LRKVL 121 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC-----CEEEECSSC-SCEEEEEEETTTT--EEEEEET--TTTEEEEEETTSC-SCEEE
T ss_pred EeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCC-CCcCeEEEEecCC--EEEEEeC--CCCEEEEEECCCC-CEEEE
Confidence 445778888776667888888876531 22211111 1234677774333 6777642 3468888888643 32211
Q ss_pred cCCCCccccccCCCcccEEE---CCEEEEeeeC-CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe
Q 017381 186 IDGFPSMILSQSSHQEGVFY---KGSLYFTTPE-PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~-~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~ 261 (372)
. . . .+ ..-.++++ +|.+||.... ...|...++....-..+.... ...|.+ |..+ ..+++
T Consensus 122 ~-~--~-~l---~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~----~~~P~G-----lald-~~~~~ 184 (619)
T 3s94_A 122 F-W--Q-EL---DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE----IYWPNG-----LTLD-YEEQK 184 (619)
T ss_dssp E-C--S-SC---SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS----CSSEEE-----EEEE-TTTTE
T ss_pred E-e--C-CC---CCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCC----CCCCcE-----EEEE-ccCCE
Confidence 0 0 0 11 12235565 5899998754 346888888643332221000 002332 3321 13689
Q ss_pred EEEEEeeecCCccceEEEEEEcCCCC--EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCC
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVAR 339 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~ 339 (372)
||++... .. .||..+.++. ...+. . .+. ........++.||+.....+.|...|..+
T Consensus 185 LY~aD~~-----~~--~I~~~~~dG~~~~~~~~----~----~~~------~P~gi~~~~~~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 185 LYWADAK-----LN--FIHKSNLDGTNRQAVVK----G----SLP------HPFALTLFEDILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp EEEEETT-----TC--CEEEESSSCCEEC-----------------------CCCEEESSSEEEEECTTTCSEEEEESSS
T ss_pred EEEEeCC-----CC--eEEEecCCCCccEEEEe----C----CCC------CceEEEEeCCEEEEecCCCCEEEEEECCC
Confidence 9998652 23 3555555554 32211 0 010 01112224557888876667888889877
Q ss_pred Cc
Q 017381 340 RT 341 (372)
Q Consensus 340 ~~ 341 (372)
++
T Consensus 244 g~ 245 (619)
T 3s94_A 244 GE 245 (619)
T ss_dssp CC
T ss_pred Cc
Confidence 64
No 138
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=63.93 E-value=75 Score=27.80 Aligned_cols=195 Identities=11% Similarity=-0.003 Sum_probs=82.1
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCC-CCC--ceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PFD--FELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~-~~~--~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~ 184 (372)
+-+|-++... .++.+.+||..+++......... ... ...+++.+.+ +.++.++ ....+.+||..+++-...
T Consensus 103 s~d~~~l~~s-~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg---~~l~sgs--~dg~v~iwd~~~~~~~~~ 176 (357)
T 4g56_B 103 VSEKGILVAS-DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG---TQAVSGG--KDFSVKVWDLSQKAVLKS 176 (357)
T ss_dssp ETTTEEEEEE-TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS---SEEEEEE--TTSCEEEEETTTTEEEEE
T ss_pred cCCCCEEEEE-CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC---CEEEEEe--CCCeEEEEECCCCcEEEE
Confidence 3445333333 35789999999887544332211 111 2233443322 2333333 235688999887643211
Q ss_pred ccCCCCccccccCCCcccEEE--CC-EEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe
Q 017381 185 DIDGFPSMILSQSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK 261 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G-~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~ 261 (372)
- .. .......+.+ +| .++..++....|..+|+.+.+-...... .........+... -.++.
T Consensus 177 ~----~~----h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~-------~~~~~~v~~v~~s-p~~~~ 240 (357)
T 4g56_B 177 Y----NA----HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF-------CASDTIPTSVTWH-PEKDD 240 (357)
T ss_dssp E----CC----CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC-------TTCCSCEEEEEEC-TTSTT
T ss_pred E----cC----CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee-------ccccccccchhhh-hcccc
Confidence 1 00 0011122332 23 2444445455688899876543321100 1111111122210 02456
Q ss_pred EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE--e-eCCEEEEEeecCCeEEEEECC
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--W-HQGMICVCCYTWPEILYYNVA 338 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~-~~~~i~~~~~~~~~v~~yd~~ 338 (372)
+++++.. ...+.+|.+.....-. .+. .....+.++ . .++.+++.+...+.|.+||++
T Consensus 241 ~la~g~~-----d~~i~~wd~~~~~~~~---~~~------------~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 241 TFACGDE-----TGNVSLVNIKNPDSAQ---TSA------------VHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp EEEEEES-----SSCEEEEESSCGGGCE---EEC------------CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred eEEEeec-----ccceeEEECCCCcEeE---EEe------------ccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 6666541 2568899774322111 110 001122222 2 333444444445679999999
Q ss_pred CCceEE
Q 017381 339 RRTWHW 344 (372)
Q Consensus 339 ~~~w~~ 344 (372)
+++...
T Consensus 301 ~~~~~~ 306 (357)
T 4g56_B 301 FSEVFR 306 (357)
T ss_dssp SCEEEE
T ss_pred CCcEeE
Confidence 887654
No 139
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=63.38 E-value=77 Score=27.73 Aligned_cols=110 Identities=11% Similarity=0.021 Sum_probs=52.6
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
+-+|-.++.+..++.+.+||..+++....-... ......+++...+.. .++ .++ ....+.+||.++++-....
T Consensus 148 spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h-~~~v~~v~~s~~~~~-~~~-s~~--~dg~v~~wd~~~~~~~~~~-- 220 (357)
T 4g56_B 148 FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAH-SSEVNCVAACPGKDT-IFL-SCG--EDGRILLWDTRKPKPATRI-- 220 (357)
T ss_dssp CSSSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTCSS-CEE-EEE--TTSCEEECCTTSSSCBCBC--
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-CCCEEEEEEccCCCc-eee-eec--cCCceEEEECCCCceeeee--
Confidence 446633333334678999999988754321111 111123333322222 233 332 2356888888776432221
Q ss_pred CCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCe
Q 017381 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGI 228 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~ 228 (372)
.... .......+.+ ++.+...+.....|..||+.+.+
T Consensus 221 ~~~~----~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 221 DFCA----SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp CCTT----CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG
T ss_pred eecc----ccccccchhhhhcccceEEEeecccceeEEECCCCc
Confidence 1110 0011123333 24555555555568899987653
No 140
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=62.85 E-value=76 Score=27.49 Aligned_cols=119 Identities=10% Similarity=0.047 Sum_probs=64.9
Q ss_pred CCE-EEEeeeCCcEEEEEecCCCeeeccCC-CCccccccCCCcccc-cceeeeccCCCeEEEEEeeecCCccceEEEEEE
Q 017381 206 KGS-LYFTTPEPFSIVRFDLENGIWETPND-ANDHMTMMLPHELTF-FRLVNDGEESNKLYLIGGVGRNGISTTMKLWEL 282 (372)
Q Consensus 206 ~G~-~y~~~~~~~~i~~yD~~~~~w~~i~~-p~~~~~~~~p~~~~~-~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l 282 (372)
+|+ +|..+.....|..||+.+.++..+.. +. .+..... ..+... -+|+...+.... ....+.||.+
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~------~~~~~~~~~~i~~s--pdg~~l~v~~~~---~~~~i~v~~~ 289 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAA------DTVNAQGSGDIHLS--PDGKYLYASNRL---KADGVAIFKV 289 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEES------CSSCCCCEEEEEEC--TTSSEEEEEECS---SSCEEEEEEE
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEec------CCCCCCCcccEEEC--CCCCEEEEECCC---CCCEEEEEEE
Confidence 565 66655455679999988776644320 10 2221111 122212 477744343311 1367999999
Q ss_pred cC-CCCEEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEE--EECCCCceEECC
Q 017381 283 GC-GGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILY--YNVARRTWHWLP 346 (372)
Q Consensus 283 ~~-~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~--yd~~~~~w~~v~ 346 (372)
+. .++++.+..++.. ....-..+. ++..+++.....+.+.+ +|.++++.+.+.
T Consensus 290 ~~~~g~~~~~~~~~~g-----------~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 290 DETNGTLTKVGYQLTG-----------IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp CTTTCCEEEEEEEECS-----------SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred cCCCCcEEEeeEecCC-----------CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 74 3557777666421 001122333 45567777655666666 677788888765
No 141
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=62.84 E-value=79 Score=27.70 Aligned_cols=194 Identities=10% Similarity=0.095 Sum_probs=85.5
Q ss_pred ecCc-EEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 108 SSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
+.+| +++... .++.+.+||...+....+..-. .....+.+.+. .-.++. ++ ....+.+|+..++.-...-
T Consensus 117 s~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~--~~v~~~~~~~~--~~~l~~-~~--~d~~i~iwd~~~~~~~~~~- 187 (425)
T 1r5m_A 117 SHDGNSIVTGV-ENGELRLWNKTGALLNVLNFHR--APIVSVKWNKD--GTHIIS-MD--VENVTILWNVISGTVMQHF- 187 (425)
T ss_dssp CTTSSEEEEEE-TTSCEEEEETTSCEEEEECCCC--SCEEEEEECTT--SSEEEE-EE--TTCCEEEEETTTTEEEEEE-
T ss_pred cCCCCEEEEEe-CCCeEEEEeCCCCeeeeccCCC--ccEEEEEECCC--CCEEEE-Ee--cCCeEEEEECCCCcEEEEe-
Confidence 4455 343333 3578999994333333333211 11223333332 213333 32 2356788888776542221
Q ss_pred CCCCccc---c------c-cCCCcccEEECCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeec
Q 017381 187 DGFPSMI---L------S-QSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDG 256 (372)
Q Consensus 187 ~~~p~~~---~------~-~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~ 256 (372)
...... . . ........+..+..++.+.....+..||+.+.+....... ..... ..+...
T Consensus 188 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~-------~~~~i--~~~~~~- 256 (425)
T 1r5m_A 188 -ELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIG-------HHGPI--SVLEFN- 256 (425)
T ss_dssp -CCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECC-------CSSCE--EEEEEE-
T ss_pred -eccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeecc-------CCCce--EEEEEC-
Confidence 111100 0 0 0001222333333344444445699999887533221101 11111 122211
Q ss_pred cCCCeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEE--EeeCCEEEEEeecCCeEE
Q 017381 257 EESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEIL 333 (372)
Q Consensus 257 ~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~ 333 (372)
-+|++++++.. ...+.+|.+..... ... ..- ...+.+ +..++ .++.....+.|.
T Consensus 257 -~~~~~l~~~~~-----d~~i~i~d~~~~~~~~~~-~~~---------------~~~i~~~~~~~~~-~l~~~~~d~~i~ 313 (425)
T 1r5m_A 257 -DTNKLLLSASD-----DGTLRIWHGGNGNSQNCF-YGH---------------SQSIVSASWVGDD-KVISCSMDGSVR 313 (425)
T ss_dssp -TTTTEEEEEET-----TSCEEEECSSSBSCSEEE-CCC---------------SSCEEEEEEETTT-EEEEEETTSEEE
T ss_pred -CCCCEEEEEcC-----CCEEEEEECCCCccceEe-cCC---------------CccEEEEEECCCC-EEEEEeCCCcEE
Confidence 46766665541 35788997653222 221 100 011222 23344 455555567899
Q ss_pred EEECCCCceEE
Q 017381 334 YYNVARRTWHW 344 (372)
Q Consensus 334 ~yd~~~~~w~~ 344 (372)
+||+++++-..
T Consensus 314 i~d~~~~~~~~ 324 (425)
T 1r5m_A 314 LWSLKQNTLLA 324 (425)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCcEeE
Confidence 99998876443
No 142
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=62.15 E-value=90 Score=30.60 Aligned_cols=112 Identities=12% Similarity=0.047 Sum_probs=62.0
Q ss_pred cCcEEEEecCCCceEEEEeccccc--eeccCCCCCCC--------CceeEEEEeCCCCEEEEEEeecCCCceEEEEECCC
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTLS--SRTIDFPTYPF--------DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD 178 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~--~~~lP~~~~~~--------~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~ 178 (372)
.+|.|++... .+.++.+|+.|++ |+.-+..+... .....++... +|++.. ....+..+|.++
T Consensus 69 ~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~v~v~~---~dg~l~AlDa~T 140 (689)
T 1yiq_A 69 VDGVMYTTGP-FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKG----KVYVGV---LDGRLEAIDAKT 140 (689)
T ss_dssp ETTEEEEECG-GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETT----EEEEEC---TTSEEEEEETTT
T ss_pred ECCEEEEEcC-CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECC----EEEEEc---cCCEEEEEECCC
Confidence 4676666542 4678889999988 55433221100 0012233221 455433 235788888887
Q ss_pred CC--ccccccCCCCccccccCCCcccEEECCEEEEeeeC-----CcEEEEEecCCC--eeec
Q 017381 179 QS--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENG--IWET 231 (372)
Q Consensus 179 ~~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~-----~~~i~~yD~~~~--~w~~ 231 (372)
++ |+... .... .........++..+|.+|+-... ...+.+||.++. .|+.
T Consensus 141 G~~~W~~~~--~~~~-~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 141 GQRAWSVDT--RADH-KRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp CCEEEEEEC--CSCT-TSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEeeeecC--cCCC-CCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 75 87654 1011 01011234567789999886432 346999999865 4764
No 143
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=61.49 E-value=85 Score=27.62 Aligned_cols=189 Identities=13% Similarity=0.129 Sum_probs=87.3
Q ss_pred CCceEEEEeccccceeccCCC--CCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC--ccccccCCCCcccc
Q 017381 119 SSSSFLVCNLVTLSSRTIDFP--TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS--WSKFDIDGFPSMIL 194 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~--~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~--W~~~~~~~~p~~~~ 194 (372)
.++.+.+||..+++....-.. +.........+.-...+-.+++.++ .+..+.+||.+... -.... .
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs--~D~~v~~wd~~~~~~~~~~~~--~------ 247 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS--CDTTVRLWDLRITSRAVRTYH--G------ 247 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE--TTSCEEEEETTTTCCCCEEEC--C------
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE--CCCeEEEEECCCCCcceEEEC--C------
Confidence 457899999999875443211 1112222222322121223444443 33578899986321 11111 0
Q ss_pred ccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeecc-CCCCccccccCCCccc-ccceeeeccCCCeEEEEEeeec
Q 017381 195 SQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETP-NDANDHMTMMLPHELT-FFRLVNDGEESNKLYLIGGVGR 270 (372)
Q Consensus 195 ~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i-~~p~~~~~~~~p~~~~-~~~lv~e~~~~g~L~vv~~~~~ 270 (372)
+...-..+.+ +|.....++....|..+|+.+.+-... ...... ...... ...+... .+|++.+++.
T Consensus 248 -h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~s--~~g~~l~~g~--- 317 (380)
T 3iz6_a 248 -HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDR----NDNELPIVTSVAFS--ISGRLLFAGY--- 317 (380)
T ss_dssp -CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSS----SCCSSCSCSEEEEC--SSSSEEEEEC---
T ss_pred -cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccc----cccccCceEEEEEC--CCCCEEEEEE---
Confidence 0111123333 566665666666799999987654322 111000 000000 1112112 4788777764
Q ss_pred CCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEE--EeeCCEEEEEeecCCeEEEEECCCC
Q 017381 271 NGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEILYYNVARR 340 (372)
Q Consensus 271 ~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (372)
....+.+|.+.....-.....+... ....+.+ +..++..++.+...+.|.+||++.+
T Consensus 318 --~dg~i~vwd~~~~~~~~~~~~~~~~-----------h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 318 --SNGDCYVWDTLLAEMVLNLGTLQNS-----------HEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp --TTSCEEEEETTTCCEEEEECCSCSS-----------CCCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred --CCCCEEEEECCCCceEEEEecccCC-----------CCCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 2357899976432222212111100 0111222 3334445555555568999998865
No 144
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=61.45 E-value=83 Score=27.47 Aligned_cols=110 Identities=10% Similarity=0.054 Sum_probs=52.0
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
+-+|-.++.+..++.+.+||..+++....-... ......+.+...+. .+++.++ .+..+.+||.++++-...-
T Consensus 136 spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h-~~~V~~~~~~~~~~--~~l~s~s--~D~~v~iwd~~~~~~~~~~-- 208 (344)
T 4gqb_B 136 LSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAH-AAQVTCVAASPHKD--SVFLSCS--EDNRILLWDTRCPKPASQI-- 208 (344)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECSSCT--TEEEEEE--TTSCEEEEETTSSSCEEEC--
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCc-CCceEEEEecCCCC--Cceeeec--cccccccccccccceeeee--
Confidence 445633333334678999999988753321110 11112333332222 2333333 2356889998876432211
Q ss_pred CCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCe
Q 017381 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGI 228 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~ 228 (372)
.... .......+.. ++.+...+.....|..||+.+.+
T Consensus 209 ~~~~----~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~ 248 (344)
T 4gqb_B 209 GCSA----PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTS 248 (344)
T ss_dssp C--------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--
T ss_pred ecce----eeccceeeeecCCCCcceEEeccCCcEEEEECCCCc
Confidence 0000 0011112332 34555556666678999988654
No 145
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=61.32 E-value=77 Score=27.04 Aligned_cols=35 Identities=17% Similarity=0.500 Sum_probs=24.1
Q ss_pred CCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChH
Q 017381 258 ESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEM 297 (372)
Q Consensus 258 ~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~ 297 (372)
-+|++++.++. ...+.+|..+..+.|..+.++...
T Consensus 272 p~g~~las~~~-----D~~v~lw~~~~~g~~~~~~~~~~~ 306 (316)
T 3bg1_A 272 ITANILAVSGG-----DNKVTLWKESVDGQWVCISDVNKG 306 (316)
T ss_dssp TTTCCEEEEES-----SSCEEEEEECTTSCEEEEEECC--
T ss_pred CCCCEEEEEcC-----CCeEEEEEECCCCcEEEeeeccCC
Confidence 35766665542 357999998777789999888643
No 146
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=61.23 E-value=87 Score=27.65 Aligned_cols=191 Identities=10% Similarity=0.054 Sum_probs=85.9
Q ss_pred CCCceEEEEecccccee--ccCCCCC-CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCcccc
Q 017381 118 PSSSSFLVCNLVTLSSR--TIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMIL 194 (372)
Q Consensus 118 ~~~~~~~v~NP~t~~~~--~lP~~~~-~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~ 194 (372)
..++.+.|||....... .++.+.. ......+.+.+... ++++.++ .+..+.+|+..++...... .-+...+
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~--~~l~s~s--~dg~v~vw~~~~~~~~~~~--~~~~~~~ 127 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHND--NVIASGS--EDCTVMVWEIPDGGLVLPL--REPVITL 127 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCT--TEEEEEE--TTSEEEEEECCTTCCSSCB--CSCSEEE
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCC--CEEEEEe--CCCeEEEEEccCCCCcccc--CCceEEe
Confidence 34578999987543221 1221111 11112334433122 3444443 3367899999887553211 0111011
Q ss_pred c-cCCCcccEEE--CC-EEEEeeeCCcEEEEEecCCCeeeccCC-CCccccccCCCcccccceeeeccCCCeEEEEEeee
Q 017381 195 S-QSSHQEGVFY--KG-SLYFTTPEPFSIVRFDLENGIWETPND-ANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVG 269 (372)
Q Consensus 195 ~-~~~~~~~v~~--~G-~~y~~~~~~~~i~~yD~~~~~w~~i~~-p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~ 269 (372)
. +...-..+.+ +| .+.+.++....|..+|+.+.+...... .+ .+... ..+... -+|++++++..
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~~v--~~~~~~--~~~~~l~~~~~- 196 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDV------HPDTI--YSVDWS--RDGALICTSCR- 196 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTT------CCSCE--EEEEEC--TTSSCEEEEET-
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCC------CCCce--EEEEEC--CCCCEEEEEec-
Confidence 1 1111122333 33 355555555679999998776543210 10 11111 122211 36776666541
Q ss_pred cCCccceEEEEEEcCCCCEEEEEec-ChHHHHHhhhhccCCCceEEEEeeCCEEEEEe---ecCCeEEEEECCCCc
Q 017381 270 RNGISTTMKLWELGCGGNWIEVERV-PEMMCRKFMSVCYHNYDHVYCFWHQGMICVCC---YTWPEILYYNVARRT 341 (372)
Q Consensus 270 ~~~~~~~i~vw~l~~~~~W~~v~~l-p~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~v~~yd~~~~~ 341 (372)
...+.+|.+.. ++ .+..+ .... ........+..++.+++.+ ...+.|.+||+++.+
T Consensus 197 ----d~~i~iwd~~~-~~--~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 197 ----DKRVRVIEPRK-GT--VVAEKDRPHE---------GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp ----TSEEEEEETTT-TE--EEEEEECSSC---------SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred ----CCcEEEEeCCC-Cc--eeeeeccCCC---------CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 35789997743 22 22222 1000 0001112233455555555 245679999998754
No 147
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=61.03 E-value=81 Score=30.77 Aligned_cols=111 Identities=14% Similarity=0.132 Sum_probs=61.7
Q ss_pred cCcEEEEecCCCceEEEEeccccc--eeccCCCCCCC--------CceeEEEEeCCCCEEEEEEeecCCCceEEEEECCC
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTLS--SRTIDFPTYPF--------DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD 178 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~--~~~lP~~~~~~--------~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~ 178 (372)
.+|.|++... .+.++.+|+.|++ |+.-+..+... .....++... +|++.. ....+..+|.++
T Consensus 65 ~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~v~~---~dg~l~alD~~t 136 (668)
T 1kv9_A 65 HDGVIYTSMS-WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGD----KVYVGT---LDGRLIALDAKT 136 (668)
T ss_dssp ETTEEEEEEG-GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBT----EEEEEC---TTSEEEEEETTT
T ss_pred ECCEEEEECC-CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECC----EEEEEc---CCCEEEEEECCC
Confidence 4666665542 4678888998888 55433221110 0112233321 555432 235788899887
Q ss_pred CC--ccccccCCCCccccccCCCcccEEECCEEEEeeeC-----CcEEEEEecCCC--eeec
Q 017381 179 QS--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENG--IWET 231 (372)
Q Consensus 179 ~~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~-----~~~i~~yD~~~~--~w~~ 231 (372)
++ |+... .-+. ........+++.+|.+|+-... ...+.+||.++. .|+.
T Consensus 137 G~~~W~~~~--~~~~--~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 137 GKAIWSQQT--TDPA--KPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp CCEEEEEEC--SCTT--SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEeeeecc--CCCC--CcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 75 87654 1111 1111234567789999876542 246999999765 4765
No 148
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=60.90 E-value=1.3e+02 Score=29.70 Aligned_cols=198 Identities=7% Similarity=0.065 Sum_probs=99.8
Q ss_pred cCcE-EEEecCCCceEEEEeccccceeccCCCCCCC-CceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 109 SKGL-LCFSLPSSSSFLVCNLVTLSSRTIDFPTYPF-DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 109 ~~Gl-l~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~-~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
.+|- |.+... .+.+.++|+.+++...++...... .....++...... .+.+ +.. ..+.+|+..++.|+....
T Consensus 415 ~~g~~lWigt~-~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~lwi-gt~---~Gl~~~~~~~~~~~~~~~ 488 (795)
T 4a2l_A 415 EKKSLVYIGTH-AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG-NLWL-GTL---SALVRFNPEQRSFTTIEK 488 (795)
T ss_dssp TTTTEEEEEET-TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS-CEEE-EES---SCEEEEETTTTEEEECCB
T ss_pred CCCCEEEEEeC-cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC-CEEE-Eec---CceeEEeCCCCeEEEccc
Confidence 4553 555432 356899999999887765421111 1111222221211 2332 221 358899999998876651
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCC--CCccccccCCCcccccceeeeccCCCeE
Q 017381 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPND--ANDHMTMMLPHELTFFRLVNDGEESNKL 262 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~--p~~~~~~~~p~~~~~~~lv~e~~~~g~L 262 (372)
..-+. .+.. .....++. +|.++. +.. ..+..||..++++ .... .. .-+|... ...+..+ .+|.|
T Consensus 489 ~~~~~-~~~~-~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~-~~~~~~~~----~~l~~~~-i~~i~~d--~~g~l 556 (795)
T 4a2l_A 489 EKDGT-PVVS-KQITTLFRDSHKRLWI-GGE-EGLSVFKQEGLDI-QKASILPV----SNVTKLF-TNCIYEA--SNGII 556 (795)
T ss_dssp CTTCC-BCCC-CCEEEEEECTTCCEEE-EES-SCEEEEEEETTEE-EECCCSCS----CGGGGSC-EEEEEEC--TTSCE
T ss_pred ccccc-ccCC-ceEEEEEECCCCCEEE-EeC-CceEEEeCCCCeE-EEecCCCC----CCCCCCe-eEEEEEC--CCCCE
Confidence 00011 1111 11123333 456554 443 4699999988887 3220 00 0022211 1233323 57888
Q ss_pred EEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEEEEEeecCCeEEEEECCC
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVAR 339 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~ 339 (372)
++... . .+++++..+. ++..... .-+. ...+..+ ..++.+++.. .+.+..||+++
T Consensus 557 WigT~-------~--Gl~~~d~~~~~~~~~~~~------~gl~-----~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~ 614 (795)
T 4a2l_A 557 WVGTR-------E--GFYCFNEKDKQIKRYNTT------NGLP-----NNVVYGILEDSFGRLWLST--NRGISCFNPET 614 (795)
T ss_dssp EEEES-------S--CEEEEETTTTEEEEECGG------GTCS-----CSCEEEEEECTTSCEEEEE--TTEEEEEETTT
T ss_pred EEEeC-------C--CceeECCCCCcEEEeCCC------CCCc-----hhheEEEEECCCCCEEEEc--CCceEEEcCCC
Confidence 88653 1 3566665544 6544221 0011 1123333 3356788876 46799999999
Q ss_pred CceEECC
Q 017381 340 RTWHWLP 346 (372)
Q Consensus 340 ~~w~~v~ 346 (372)
++++...
T Consensus 615 ~~~~~~~ 621 (795)
T 4a2l_A 615 EKFRNFT 621 (795)
T ss_dssp TEEEEEC
T ss_pred CcEEEcC
Confidence 9888654
No 149
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=60.52 E-value=83 Score=27.14 Aligned_cols=191 Identities=10% Similarity=0.126 Sum_probs=88.2
Q ss_pred ecCcEEEEecCCCceEEEEeccccceec-cCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC--cccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS--WSKF 184 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~--W~~~ 184 (372)
+.+|-+++.+..++.+.+||..+++... ++.-. .....+++.+.+ +.++.++ ....+.+|+..++. .+..
T Consensus 64 s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~--~~v~~~~~s~~~---~~l~s~~--~d~~v~iw~~~~~~~~~~~~ 136 (340)
T 1got_B 64 GTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS--SWVMTCAYAPSG---NYVACGG--LDNICSIYNLKTREGNVRVS 136 (340)
T ss_dssp CTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS--SCEEEEEECTTS---SEEEEEE--TTCEEEEEETTTCSBSCEEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCCcceEeecCC--ccEEEEEECCCC---CEEEEEe--CCCeEEEEECccCCCcceeE
Confidence 3344223333345789999988876432 22111 111233333322 2344443 23578899887643 2211
Q ss_pred ccCCCCccccccCCCcccEEE-CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEE
Q 017381 185 DIDGFPSMILSQSSHQEGVFY-KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLY 263 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~-~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~ 263 (372)
. .+..+ ........+. +|.+ ..++....|..+|+.+.+....... ..... ..+... -+|+++
T Consensus 137 ~--~~~~h---~~~v~~~~~~~~~~l-~s~s~d~~i~~wd~~~~~~~~~~~~-------h~~~v--~~~~~~--~~~~~l 199 (340)
T 1got_B 137 R--ELAGH---TGYLSCCRFLDDNQI-VTSSGDTTCALWDIETGQQTTTFTG-------HTGDV--MSLSLA--PDTRLF 199 (340)
T ss_dssp E--EEECC---SSCEEEEEEEETTEE-EEEETTSCEEEEETTTTEEEEEECC-------CSSCE--EEEEEC--TTSSEE
T ss_pred E--EecCC---CccEEEEEECCCCcE-EEEECCCcEEEEECCCCcEEEEEcC-------CCCce--EEEEEC--CCCCEE
Confidence 1 11100 0001112222 4553 3444555699999987754432101 11111 122212 467777
Q ss_pred EEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEEEEEeecCCeEEEEECCCCc
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~ 341 (372)
+.+.. ...+.+|.+... . .+..+.. ....+.++ ..++..++.+...+.|.+||+++++
T Consensus 200 ~sg~~-----d~~v~~wd~~~~-~--~~~~~~~------------h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 200 VSGAC-----DASAKLWDVREG-M--CRQTFTG------------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp EEEET-----TSCEEEEETTTC-S--EEEEECC------------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEeC-----CCcEEEEECCCC-e--eEEEEcC------------CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 76652 357899987432 2 1111110 01122222 2334445555556789999998875
Q ss_pred e
Q 017381 342 W 342 (372)
Q Consensus 342 w 342 (372)
-
T Consensus 260 ~ 260 (340)
T 1got_B 260 E 260 (340)
T ss_dssp E
T ss_pred E
Confidence 3
No 150
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=60.05 E-value=91 Score=27.45 Aligned_cols=206 Identities=11% Similarity=0.071 Sum_probs=90.0
Q ss_pred ecCcEEEEecCCCceEEEEeccccceec--cCCCC-C-CCCc--eeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRT--IDFPT-Y-PFDF--ELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~--lP~~~-~-~~~~--~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W 181 (372)
+-+|-.++.+..++.+.+||..++.... .+... . .... ..+.+.+. ...+++..+ .+..+.+||..++.-
T Consensus 117 s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~-~~~~l~s~s---~D~~i~~wd~~~~~~ 192 (380)
T 3iz6_a 117 APNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPD-QETRLITGS---GDQTCVLWDVTTGQR 192 (380)
T ss_dssp CTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSS-SSSCEEEEC---TTSCEEEECTTTCCE
T ss_pred CCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecC-CCCEEEEEC---CCCcEEEEEcCCCcE
Confidence 4455434444456788899987654221 11110 0 0000 11112121 122333322 345788898887653
Q ss_pred cccccCCCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCC--eeeccCCCCccccccCCCcccccceeeec
Q 017381 182 SKFDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTMMLPHELTFFRLVNDG 256 (372)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~--~w~~i~~p~~~~~~~~p~~~~~~~lv~e~ 256 (372)
...-....+. ........+.+ ++.+...++....|..+|+... ....+. . ..... ..+...
T Consensus 193 ~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~-~-------h~~~v--~~v~~~- 258 (380)
T 3iz6_a 193 ISIFGSEFPS---GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH-G-------HEGDI--NSVKFF- 258 (380)
T ss_dssp EEEECCCSSS---SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC-C-------CSSCC--CEEEEC-
T ss_pred EEEeecccCC---CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC-C-------cCCCe--EEEEEe-
Confidence 2211001111 00011112222 5666666666667999998632 111111 0 11111 122211
Q ss_pred cCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEE
Q 017381 257 EESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYN 336 (372)
Q Consensus 257 ~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd 336 (372)
-+|+.++.+. ....+.+|.+.....-.....-+... ... .......++..++..++.+...+.|.+||
T Consensus 259 -p~~~~l~s~s-----~D~~i~lwd~~~~~~~~~~~~~~~~~-----~~~-~~~v~~~~~s~~g~~l~~g~~dg~i~vwd 326 (380)
T 3iz6_a 259 -PDGQRFGTGS-----DDGTCRLFDMRTGHQLQVYNREPDRN-----DNE-LPIVTSVAFSISGRLLFAGYSNGDCYVWD 326 (380)
T ss_dssp -TTSSEEEEEC-----SSSCEEEEETTTTEEEEEECCCCSSS-----CCS-SCSCSEEEECSSSSEEEEECTTSCEEEEE
T ss_pred -cCCCeEEEEc-----CCCeEEEEECCCCcEEEEeccccccc-----ccc-cCceEEEEECCCCCEEEEEECCCCEEEEE
Confidence 4677766654 23578999875322111111100000 000 00011223344555566665667899999
Q ss_pred CCCCceE
Q 017381 337 VARRTWH 343 (372)
Q Consensus 337 ~~~~~w~ 343 (372)
..+++..
T Consensus 327 ~~~~~~~ 333 (380)
T 3iz6_a 327 TLLAEMV 333 (380)
T ss_dssp TTTCCEE
T ss_pred CCCCceE
Confidence 9887653
No 151
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=59.75 E-value=87 Score=28.26 Aligned_cols=111 Identities=6% Similarity=0.057 Sum_probs=59.9
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCe-EEEEEeeecCCccceEEEEEEcC
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGC 284 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~vv~~~~~~~~~~~i~vw~l~~ 284 (372)
+|.+|+.......|..+|+.+.+...+... ..... +... .+|+ |++.... ... .||.++.
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~---------~~~~~--ia~~--~~g~~l~~~d~~----~~~--~I~~~d~ 201 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPG---------FKGGK--PAVT--KDKQRVYSIGWE----GTH--TVYVYMK 201 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEET---------CCBCB--CEEC--TTSSEEEEEBSS----TTC--EEEEEEG
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeecc---------CCCCc--eeEe--cCCCcEEEEecC----CCc--eEEEEEc
Confidence 689999887667899999998776654211 11111 2212 3454 5555431 111 5666665
Q ss_pred CCCEE--EEEecChHHHHHhhhhccCCCceEEEEee-CCEEEEEeecCCeEEEEECCCCceEEC
Q 017381 285 GGNWI--EVERVPEMMCRKFMSVCYHNYDHVYCFWH-QGMICVCCYTWPEILYYNVARRTWHWL 345 (372)
Q Consensus 285 ~~~W~--~v~~lp~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~v~~yd~~~~~w~~v 345 (372)
.+.|. .+..++... . ..... .++.. ++.||+.. ..+.|..||+.++....+
T Consensus 202 ~~~~~~~~~g~~~~~~----~----~~p~~-iav~p~~g~lyv~d-~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTF----S----GKIGA-VALDETEEWLYFVD-SNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp GGTTCEEEEEECCTTS----C----SCCCB-CEECTTSSEEEEEC-TTCEEEEEETTTCCEEEE
T ss_pred CCCceeEEeeeccchh----c----CCcEE-EEEeCCCCeEEEEE-CCCcEEEEECCCCCEEEE
Confidence 54443 332222100 0 00111 23333 67888843 456799999998876655
No 152
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=59.37 E-value=76 Score=30.30 Aligned_cols=120 Identities=10% Similarity=0.151 Sum_probs=61.9
Q ss_pred cccEEECCEEEEeeeCCcEEEEEec-CC--CeeeccCCCCccccccCC--C-cccccceeeeccCCCeEEEEEeeecCCc
Q 017381 200 QEGVFYKGSLYFTTPEPFSIVRFDL-EN--GIWETPNDANDHMTMMLP--H-ELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (372)
Q Consensus 200 ~~~v~~~G~~y~~~~~~~~i~~yD~-~~--~~w~~i~~p~~~~~~~~p--~-~~~~~~lv~e~~~~g~L~vv~~~~~~~~ 273 (372)
..+++.+|.+|+.+.....+.++|. ++ ..|+.-. +..... .+ + ......++. .+|+||+...
T Consensus 56 ~~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~-~~~~~~--~~~~~~~~~~~~~~~---~~~~v~v~~~------ 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHKP-KQDAST--KAVMCCDVVDRGLAY---GAGQIVKKQA------ 123 (571)
T ss_dssp SCCEEETTEEEEECSTTTCEEEEETTCTTSEEEEECC-CCCGGG--GGGCTTCSCCCCCEE---ETTEEEEECT------
T ss_pred cccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEcC-CCCccc--cccccccccccccEE---ECCEEEEEeC------
Confidence 3467889999987762345999998 65 4677521 100000 00 0 001112332 5788877643
Q ss_pred cceEEEEEEcC-CCC--EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCceE
Q 017381 274 STTMKLWELGC-GGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRTWH 343 (372)
Q Consensus 274 ~~~i~vw~l~~-~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~w~ 343 (372)
.. .++.+|. .++ |+.-.. ... . . + .......+ .++.||+.... .+.|.+||.++++-.
T Consensus 124 dg--~l~alD~~tG~~~W~~~~~--~~~-~---~--~-~~~~~P~v-~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 124 NG--HLLALDAKTGKINWEVEVC--DPK-V---G--S-TLTQAPFV-AKDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp TS--EEEEEETTTCCEEEEEECC--CGG-G---T--C-BCCSCCEE-ETTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred CC--EEEEEECCCCCEEEEecCC--CCC-c---c--c-eeccCCEE-ECCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 12 3555664 344 875421 110 0 0 0 01111122 47788887642 467999999998533
No 153
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=59.05 E-value=93 Score=27.29 Aligned_cols=188 Identities=15% Similarity=0.116 Sum_probs=83.6
Q ss_pred CCceEEEEeccccc------eeccC-CCC-CCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCC
Q 017381 119 SSSSFLVCNLVTLS------SRTID-FPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFP 190 (372)
Q Consensus 119 ~~~~~~v~NP~t~~------~~~lP-~~~-~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p 190 (372)
.++.+.+||..+++ ..... ... .......+.+.+.+. .+++.++ ....+.+||..++.-...- ..+
T Consensus 134 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~--~dg~v~iwd~~~~~~~~~~--~~~ 207 (416)
T 2pm9_A 134 NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLA--HVFASAG--SSNFASIWDLKAKKEVIHL--SYT 207 (416)
T ss_dssp SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCT--TEEEEES--SSSCEEEEETTTTEEEEEE--CCC
T ss_pred CCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCC--cEEEEEc--CCCCEEEEECCCCCcceEE--ecc
Confidence 46789999998876 21111 110 111122344433322 2333332 2356889998876542221 111
Q ss_pred ccccccCCCcccEEE--CC-EEEEeeeCCc---EEEEEecCCCeeeccCCCCccccccCC--CcccccceeeeccC-CCe
Q 017381 191 SMILSQSSHQEGVFY--KG-SLYFTTPEPF---SIVRFDLENGIWETPNDANDHMTMMLP--HELTFFRLVNDGEE-SNK 261 (372)
Q Consensus 191 ~~~~~~~~~~~~v~~--~G-~~y~~~~~~~---~i~~yD~~~~~w~~i~~p~~~~~~~~p--~~~~~~~lv~e~~~-~g~ 261 (372)
............+.+ +| .+.+.+.... .|..||+.+..-.... +. .......+... - +|+
T Consensus 208 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~---------~~~~~~~~v~~~~~s--~~~~~ 276 (416)
T 2pm9_A 208 SPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQT---------LNQGHQKGILSLDWC--HQDEH 276 (416)
T ss_dssp CCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBC---------CCSCCSSCEEEEEEC--SSCSS
T ss_pred ccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEE---------eecCccCceeEEEeC--CCCCC
Confidence 000000011122333 23 4555555443 6889998764211101 11 11111122211 2 677
Q ss_pred EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCC-EEEEEeecCCeEEEEECCCC
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQG-MICVCCYTWPEILYYNVARR 340 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~v~~yd~~~~ 340 (372)
+++.+.. ...+.+|.++.. + .+..+.... ..... ..+..++ .+++.....+.|.+||+++.
T Consensus 277 ~l~s~~~-----dg~v~~wd~~~~-~--~~~~~~~~~---------~~v~~-~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 277 LLLSSGR-----DNTVLLWNPESA-E--QLSQFPARG---------NWCFK-TKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp CEEEEES-----SSEEEEECSSSC-C--EEEEEECSS---------SCCCC-EEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred eEEEEeC-----CCCEEEeeCCCC-c--cceeecCCC---------CceEE-EEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 7766652 357899976432 2 222221100 00011 1222233 45555555567899999876
Q ss_pred c
Q 017381 341 T 341 (372)
Q Consensus 341 ~ 341 (372)
+
T Consensus 339 ~ 339 (416)
T 2pm9_A 339 T 339 (416)
T ss_dssp C
T ss_pred C
Confidence 4
No 154
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=58.82 E-value=1e+02 Score=27.68 Aligned_cols=103 Identities=9% Similarity=0.062 Sum_probs=52.3
Q ss_pred EEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCeeeccCCC
Q 017381 159 IFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDA 235 (372)
Q Consensus 159 vv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p 235 (372)
+++.|+ ....+.+||..++.-.... .... +...-..+.+ +|...+.++....|..+|+.++....+...
T Consensus 134 ~lasGs--~dg~i~lWd~~~~~~~~~~--~~~g----H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~ 205 (435)
T 4e54_B 134 TVAVGS--KGGDIMLWNFGIKDKPTFI--KGIG----AGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASS 205 (435)
T ss_dssp CEEEEE--TTSCEEEECSSCCSCCEEE--CCCS----SSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECC
T ss_pred EEEEEe--CCCEEEEEECCCCCceeEE--EccC----CCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEecc
Confidence 455554 2346888888776543222 1111 1111223333 455555555556799999988766554211
Q ss_pred CccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEc
Q 017381 236 NDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELG 283 (372)
Q Consensus 236 ~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~ 283 (372)
.........+... -+|++++++.. ...+.+|.++
T Consensus 206 -------~~~~~~~~~~~~~--~~~~~l~~g~~-----dg~i~~wd~~ 239 (435)
T 4e54_B 206 -------DTINIWFCSLDVS--ASSRMVVTGDN-----VGNVILLNMD 239 (435)
T ss_dssp -------SSCSCCCCCEEEE--TTTTEEEEECS-----SSBEEEEESS
T ss_pred -------CCCCccEEEEEEC--CCCCEEEEEeC-----CCcEeeeccC
Confidence 1111111122112 47777776642 3578899874
No 155
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=58.81 E-value=1e+02 Score=27.55 Aligned_cols=135 Identities=16% Similarity=0.155 Sum_probs=68.8
Q ss_pred CccccccCCCCCeeeecCCCCCCCCCceEEEE--ecCc----EEEEecCC--CceEEEE--eccccceeccCCC--C--C
Q 017381 76 DQYPLYDSTHGTWRRLSLPYSLLLPSAATLLS--SSKG----LLCFSLPS--SSSFLVC--NLVTLSSRTIDFP--T--Y 141 (372)
Q Consensus 76 ~~~~~~d~~~~~w~~l~~~~~~~~~~~~~~~~--s~~G----ll~~~~~~--~~~~~v~--NP~t~~~~~lP~~--~--~ 141 (372)
..+..||...+.-..++... ....-+.- .-+| +++..... .+++.+| ||.++++..+..+ | .
T Consensus 50 ~gL~Vydl~G~~l~~~~~g~----~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t 125 (355)
T 3amr_A 50 SGLVVYSLDGKMLHSYNTGK----LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIAT 125 (355)
T ss_dssp TEEEEEETTSCEEEEECCSC----EEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEEC
T ss_pred CCEEEEcCCCcEEEEccCCC----cccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCC
Confidence 35677888666555554321 01111111 1122 34555555 5778887 9999998888543 2 2
Q ss_pred C-CCceeEEEE--eCCCCEEEEEEeecCCCceEEEEEC---CCCCcc--ccccCCCCccccccCCCcccEEEC---CEEE
Q 017381 142 P-FDFELLTLV--STPSGYKIFMLFAKSFPNYAFVYDS---TDQSWS--KFDIDGFPSMILSQSSHQEGVFYK---GSLY 210 (372)
Q Consensus 142 ~-~~~~~~~~~--~~~~~ykvv~~~~~~~~~~~~vy~s---~~~~W~--~~~~~~~p~~~~~~~~~~~~v~~~---G~~y 210 (372)
. ....++++- +.++.+.+++.... ..++.|.. ..++.. .+. .++ ++ ....+++++ |.+|
T Consensus 126 ~~~~pyGlcly~~~~~g~~yafV~~k~---G~~~q~~l~~~~~g~~~~~lVR--~f~---lg--sq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGKYYAMVTGKE---GEFEQYELKADKNGYISGKKVR--AFK---MN--SQTEGMAADDEYGRLY 195 (355)
T ss_dssp CCSSCCCEEEEECTTTCCEEEEEECSS---SEEEEEEEEECTTSCEEEEEEE--EEE---CS--SCEEEEEEETTTTEEE
T ss_pred CCCCeeEEEEEecCCCCcEEEEEECCC---CeEEEEEEEeCCCCcccceEEE--Eec---CC--CCcceEEEcCCCCeEE
Confidence 2 333456653 32333334444332 45556555 455442 222 111 11 123355553 7888
Q ss_pred EeeeCCcEEEEEecC
Q 017381 211 FTTPEPFSIVRFDLE 225 (372)
Q Consensus 211 ~~~~~~~~i~~yD~~ 225 (372)
+ +.+...|..||.+
T Consensus 196 v-~eEd~GIw~~da~ 209 (355)
T 3amr_A 196 I-AEEDEAIWKFSAE 209 (355)
T ss_dssp E-EETTTEEEEEECS
T ss_pred E-ecccceEEEEeCC
Confidence 5 5455679999955
No 156
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=58.42 E-value=87 Score=26.73 Aligned_cols=102 Identities=7% Similarity=-0.030 Sum_probs=51.0
Q ss_pred cEEEEecCCCceEEEEeccc-ccee--ccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 111 GLLCFSLPSSSSFLVCNLVT-LSSR--TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 111 Gll~~~~~~~~~~~v~NP~t-~~~~--~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
|-.++.+..++.+.+||..+ ++.. .+.. .......+.+.+. . +.++.++ ....+.+||..++.-....
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~~~~--~-~~l~s~~--~dg~v~iwd~~~~~~~~~~-- 124 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQTIPKAQQM--HTGPVLDVCWSDD--G-SKVFTAS--CDKTAKMWDLSSNQAIQIA-- 124 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSCEEEEEEEE--CSSCEEEEEECTT--S-SEEEEEE--TTSEEEEEETTTTEEEEEE--
T ss_pred ceEEEEECCCCcEEEEEcCCCCceeEEEecc--ccCCEEEEEECcC--C-CEEEEEc--CCCcEEEEEcCCCCceeec--
Confidence 43333333457899999887 3321 1111 0111223333332 2 2333332 2357889999887643332
Q ss_pred CCCccccccCCCcccEEE----CCEEEEeeeCCcEEEEEecCCCe
Q 017381 188 GFPSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGI 228 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~----~G~~y~~~~~~~~i~~yD~~~~~ 228 (372)
... .....+.+ +|.+.+.+.....|..||+.+.+
T Consensus 125 ~~~-------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 125 QHD-------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp ECS-------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred ccc-------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 111 11123332 45666666666679999987654
No 157
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=57.83 E-value=1e+02 Score=27.46 Aligned_cols=188 Identities=9% Similarity=-0.043 Sum_probs=93.9
Q ss_pred CcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCC
Q 017381 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGF 189 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~ 189 (372)
.+.+++.. ...+...++.+++...+.... ....+++++...+ +|++... ....+..++..++..+.+. ..
T Consensus 87 ~~~l~~~~--~~~I~~i~~~~~~~~~~~~~~--~~~~gl~~d~~~~--~ly~~D~--~~~~I~r~~~~g~~~~~~~--~~ 156 (386)
T 3v65_B 87 EPVLLFAN--RIDIRQVLPHRSEYTLLLNNL--ENAIALDFHHRRE--LVFWSDV--TLDRILRANLNGSNVEEVV--ST 156 (386)
T ss_dssp CCEEEEEC--BSCEEEECTTSCCCEEEECSC--SCEEEEEEETTTT--EEEEEET--TTTEEEEEETTSCCEEEEE--CS
T ss_pred cceeEeec--CccceeeccCCCcEEEEecCC--CccEEEEEecCCC--eEEEEeC--CCCcEEEEecCCCCcEEEE--eC
Confidence 34444443 246677777766654433211 1223455553322 6666542 3457888888776544432 10
Q ss_pred CccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEE
Q 017381 190 PSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIG 266 (372)
Q Consensus 190 p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~ 266 (372)
.+ ....++.+ +|.+||.......|..+|+....-..+...+ ...|. .++.. -.+|.||+..
T Consensus 157 ---~~---~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~----l~~P~-----giavd-p~~g~ly~td 220 (386)
T 3v65_B 157 ---GL---ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS----LEKPR-----AIALH-PMEGTIYWTD 220 (386)
T ss_dssp ---SC---SCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS----CSCEE-----EEEEE-TTTTEEEEEE
T ss_pred ---CC---CCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC----CCCCc-----EEEEE-cCCCeEEEec
Confidence 01 11234444 5899999877677999988754332221010 00122 23321 1368888876
Q ss_pred eeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEECCCCc
Q 017381 267 GVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 267 ~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~ 341 (372)
.. ... .|++++.+++ -+.+..-. + ....-.++. .++.||+.....+.|.++|+....
T Consensus 221 ~~----~~~--~I~r~~~dG~~~~~~~~~~-------~-----~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 221 WG----NTP--RIEASSMDGSGRRIIADTH-------L-----FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 279 (386)
T ss_dssp CS----SSC--EEEEEETTSCSCEEEECSS-------C-----SCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS
T ss_pred cC----CCC--EEEEEeCCCCCcEEEEECC-------C-----CCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe
Confidence 41 112 4555555544 22111100 0 001112333 577888887666778888887543
No 158
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=57.51 E-value=86 Score=26.39 Aligned_cols=195 Identities=13% Similarity=0.109 Sum_probs=89.3
Q ss_pred ecCcEEEEecCCCceEEEEeccccceec-cCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
+.+|-.++.+..++.+.+||..+++... +..- ......+.+.+.+ +.++.++ ....+.+||..++.- ..
T Consensus 74 ~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~--~~~v~~~~~~~~~---~~l~s~~--~d~~i~iwd~~~~~~--~~- 143 (312)
T 4ery_A 74 SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH--SNYVFCCNFNPQS---NLIVSGS--FDESVRIWDVKTGKC--LK- 143 (312)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECSSS---SEEEEEE--TTSCEEEEETTTCCE--EE-
T ss_pred cCCCCEEEEECCCCEEEEEECCCCcEEEEEcCC--CCCEEEEEEcCCC---CEEEEEe--CCCcEEEEECCCCEE--EE-
Confidence 3455323333346789999998876432 1110 0111223333322 2333333 235688999877542 11
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEE
Q 017381 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYL 264 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~v 264 (372)
.++. .......+.+ +|.+...+.....|..||+.+.+...... .........+... -+|+.++
T Consensus 144 -~~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~--------~~~~~~~~~~~~~--~~~~~l~ 208 (312)
T 4ery_A 144 -TLPA----HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLI--------DDDNPPVSFVKFS--PNGKYIL 208 (312)
T ss_dssp -EECC----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC--------CSSCCCEEEEEEC--TTSSEEE
T ss_pred -EecC----CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEe--------ccCCCceEEEEEC--CCCCEEE
Confidence 1111 0011112222 46666566655679999998765432110 1111111111112 4677666
Q ss_pred EEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE-eeCCEEEEEeecCCeEEEEECCCCceE
Q 017381 265 IGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 265 v~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
++.. ...+.+|.+... + .+..+.... . ........+ ..++..++.+...+.|.+||+++++-.
T Consensus 209 ~~~~-----d~~i~iwd~~~~-~--~~~~~~~~~-----~---~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 209 AATL-----DNTLKLWDYSKG-K--CLKTYTGHK-----N---EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp EEET-----TTEEEEEETTTT-E--EEEEECSSC-----C---SSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred EEcC-----CCeEEEEECCCC-c--EEEEEEecC-----C---ceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 6541 357899987432 2 111111000 0 000111112 234445555555678999999987643
No 159
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=56.93 E-value=1e+02 Score=27.12 Aligned_cols=107 Identities=14% Similarity=0.073 Sum_probs=56.1
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCC
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (372)
+|.....+.....|..||+.+.+-...... ...... .+... -+|++++.+.. ...+.+|.++..
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------h~~~v~--~~~~~--~~~~~l~s~s~-----d~~i~iwd~~~~ 171 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQA-------HVSEIT--KLKFF--PSGEALISSSQ-----DMQLKIWSVKDG 171 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETTS-------SSSCEE--EEEEC--TTSSEEEEEET-----TSEEEEEETTTC
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeeccc-------ccCccE--EEEEC--CCCCEEEEEeC-----CCeEEEEeCCCC
Confidence 566666666556789999887665443211 112221 22211 46776666541 357999988643
Q ss_pred CCEEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEEEEEeecCCeEEEEECCCCceE
Q 017381 286 GNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 286 ~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
..-..+.. ....+.++ ..++..++.+...+.|.+||+++++-.
T Consensus 172 ~~~~~~~~---------------h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 172 SNPRTLIG---------------HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp CCCEEEEC---------------CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred cCceEEcC---------------CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 33111111 01122322 223334444545567999999987543
No 160
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=56.64 E-value=62 Score=27.41 Aligned_cols=27 Identities=19% Similarity=0.155 Sum_probs=21.4
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeeecc
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWETP 232 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~~i 232 (372)
+|.+||+......|..||+.+.+....
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~ 50 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRV 50 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 479999987777899999988766544
No 161
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=56.31 E-value=80 Score=30.89 Aligned_cols=121 Identities=17% Similarity=0.223 Sum_probs=61.4
Q ss_pred cccEEECCEEEEeeeCCcEEEEEecCCC--eeeccCCCCccccccCC---CcccccceeeeccCCCeEEEEEeeecCCcc
Q 017381 200 QEGVFYKGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTMMLP---HELTFFRLVNDGEESNKLYLIGGVGRNGIS 274 (372)
Q Consensus 200 ~~~v~~~G~~y~~~~~~~~i~~yD~~~~--~w~~i~~p~~~~~~~~p---~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~ 274 (372)
..+++.+|.+|..+... .+.++|.++. .|+.-. ...... .+ +......+.. .+++||+... .
T Consensus 71 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~-~~~~~~--~~~~~~~~~~~~~a~---~~~~v~v~~~------d 137 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASWS-VVHAIDTRTGNRIWTYDP-QIDRST--GFKGCCDVVNRGVAL---WKGKVYVGAW------D 137 (677)
T ss_dssp CCCEEETTEEEEECGGG-CEEEEETTTTEEEEEECC-CCCGGG--GGGSSSCSCCCCCEE---ETTEEEEECT------T
T ss_pred eCCEEECCEEEEECCCC-eEEEEECCCCcEEEEEcC-CCCccc--cccccccCCCCCceE---ECCEEEEEcC------C
Confidence 34678899999876543 5999998765 576521 100000 00 0011122332 5788877643 1
Q ss_pred ceEEEEEEcC-CCC--EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCc--eEE
Q 017381 275 TTMKLWELGC-GGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRT--WHW 344 (372)
Q Consensus 275 ~~i~vw~l~~-~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~--w~~ 344 (372)
. .++.+|. .++ |+.-...... . .+ ....... ..++.||+.... .+.|.+||.+|++ |+.
T Consensus 138 g--~l~alD~~tG~~~W~~~~~~~~~------~-~~-~~~~~p~-v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 138 G--RLIALDAATGKEVWHQNTFEGQK------G-SL-TITGAPR-VFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp S--EEEEEETTTCCEEEEEETTTTCC------S-SC-BCCSCCE-EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred C--EEEEEECCCCCEEeeecCCcCcC------c-Cc-ccccCcE-EECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 2 3555554 344 8753210000 0 00 0011112 247788886542 4679999999985 544
No 162
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=55.12 E-value=99 Score=26.35 Aligned_cols=67 Identities=10% Similarity=0.103 Sum_probs=36.0
Q ss_pred ecCc-EEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC
Q 017381 108 SSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS 180 (372)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~ 180 (372)
+.+| +++. ...++.+.+||..+++...+..- ......+.+...... +.++.++ ....+.+||..++.
T Consensus 95 ~~~~~~l~s-~~~dg~v~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~-~~l~~~~--~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 95 SDDGSKVFT-ASCDKTAKMWDLSSNQAIQIAQH--DAPVKTIHWIKAPNY-SCVMTGS--WDKTLKFWDTRSSN 162 (368)
T ss_dssp CTTSSEEEE-EETTSEEEEEETTTTEEEEEEEC--SSCEEEEEEEECSSC-EEEEEEE--TTSEEEEECSSCSS
T ss_pred CcCCCEEEE-EcCCCcEEEEEcCCCCceeeccc--cCceEEEEEEeCCCC-CEEEEcc--CCCcEEEEECCCCc
Confidence 3355 3333 33457899999998886654321 111223444323333 4444443 23578899987754
No 163
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=54.56 E-value=72 Score=27.56 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=20.6
Q ss_pred CEEEEeeeCCcEEEEEecCCCeeecc
Q 017381 207 GSLYFTTPEPFSIVRFDLENGIWETP 232 (372)
Q Consensus 207 G~~y~~~~~~~~i~~yD~~~~~w~~i 232 (372)
+.+||+......|..||+.+.+...+
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~ 86 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVH 86 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEE
Confidence 68999886666799999988776654
No 164
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=54.21 E-value=1.2e+02 Score=27.03 Aligned_cols=139 Identities=6% Similarity=-0.027 Sum_probs=61.7
Q ss_pred CceEEEEeccccceeccCCCCCC-CC--ceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCcccccc
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYP-FD--FELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQ 196 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~-~~--~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~ 196 (372)
++.+.+|+..+++-...+..... .. ...+++.+... .++++++...+..+.+||..++.-...- ....
T Consensus 251 D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~--~~la~~~gs~D~~I~iwd~~t~~~~~~~--~~~~----- 321 (420)
T 4gga_A 251 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS--NVLATGGGTSDRHIRIWNVCSGACLSAV--DAHS----- 321 (420)
T ss_dssp TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCT--TEEEEEECTTTCEEEEEETTTTEEEEEE--ECSS-----
T ss_pred cccceEEeeccccccceeeeeecccCCceeeeeeCCCcc--cEEEEEeecCCCEEEEEeCCccccceee--cccc-----
Confidence 35677777766653322211111 11 12233333222 3444443334567899998876432221 0000
Q ss_pred CCCcccEEE-CCEEEEee-e-CCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCc
Q 017381 197 SSHQEGVFY-KGSLYFTT-P-EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (372)
Q Consensus 197 ~~~~~~v~~-~G~~y~~~-~-~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~ 273 (372)
.....++. ++...+.+ + ....|..||..+.+-.... .+ ..... ..+... -+|+.++.++ .
T Consensus 322 -~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l-~g------H~~~V--~~l~~s--pdg~~l~S~s-----~ 384 (420)
T 4gga_A 322 -QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KG------HTSRV--LSLTMS--PDGATVASAA-----A 384 (420)
T ss_dssp -CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CC------CSSCE--EEEEEC--TTSSCEEEEE-----T
T ss_pred -ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE-cC------CCCCE--EEEEEc--CCCCEEEEEe-----c
Confidence 01111222 33333333 2 3456889998765432211 10 11111 122211 4777666554 1
Q ss_pred cceEEEEEEcC
Q 017381 274 STTMKLWELGC 284 (372)
Q Consensus 274 ~~~i~vw~l~~ 284 (372)
..++.||.+.+
T Consensus 385 D~tvriWdv~~ 395 (420)
T 4gga_A 385 DETLRLWRCFE 395 (420)
T ss_dssp TTEEEEECCSC
T ss_pred CCeEEEEECCC
Confidence 35899998754
No 165
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=53.88 E-value=1.2e+02 Score=26.84 Aligned_cols=193 Identities=11% Similarity=0.066 Sum_probs=88.3
Q ss_pred ecCc-EEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 108 SSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
+.+| +++... .++.+.+||..+++....-.. .......+.++. +.++.++ ....+.+||.....-....
T Consensus 143 s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~-----~~l~~~~--~dg~i~i~d~~~~~~~~~~- 212 (401)
T 4aez_A 143 SHDGSFLSVGL-GNGLVDIYDVESQTKLRTMAG-HQARVGCLSWNR-----HVLSSGS--RSGAIHHHDVRIANHQIGT- 212 (401)
T ss_dssp CTTSSEEEEEE-TTSCEEEEETTTCCEEEEECC-CSSCEEEEEEET-----TEEEEEE--TTSEEEEEETTSSSCEEEE-
T ss_pred CCCCCEEEEEC-CCCeEEEEECcCCeEEEEecC-CCCceEEEEECC-----CEEEEEc--CCCCEEEEecccCcceeeE-
Confidence 3355 333332 357899999988764322111 111122333321 2333333 3467889988743211111
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEE
Q 017381 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYL 264 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~v 264 (372)
+.. ....-..+.+ +|.....++....|..||+.+.+-...... ........... . .++.+++
T Consensus 213 --~~~----~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~-p--~~~~ll~ 276 (401)
T 4aez_A 213 --LQG----HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN-------HNAAVKAVAWC-P--WQSNLLA 276 (401)
T ss_dssp --EEC----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC-------CSSCCCEEEEC-T--TSTTEEE
T ss_pred --EcC----CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC-------CcceEEEEEEC-C--CCCCEEE
Confidence 000 0011122233 566666666656799999987543321111 11111111111 1 2345666
Q ss_pred EEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEE--Ee-eCCEEEEEe-ecCCeEEEEECCCC
Q 017381 265 IGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC--FW-HQGMICVCC-YTWPEILYYNVARR 340 (372)
Q Consensus 265 v~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~--~~-~~~~i~~~~-~~~~~v~~yd~~~~ 340 (372)
.++. .....+.+|.+.....-..+ ... ..+.+ +. .+..++... ...+.|.+||+.++
T Consensus 277 ~~~g---s~d~~i~i~d~~~~~~~~~~-~~~---------------~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 277 TGGG---TMDKQIHFWNAATGARVNTV-DAG---------------SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp EECC---TTTCEEEEEETTTCCEEEEE-ECS---------------SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred EecC---CCCCEEEEEECCCCCEEEEE-eCC---------------CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 5431 12467899987532221111 111 11222 22 344444443 24567999999987
Q ss_pred ceEEC
Q 017381 341 TWHWL 345 (372)
Q Consensus 341 ~w~~v 345 (372)
+...+
T Consensus 338 ~~~~~ 342 (401)
T 4aez_A 338 GLTKQ 342 (401)
T ss_dssp EEEEE
T ss_pred cceeE
Confidence 66553
No 166
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=53.56 E-value=1.3e+02 Score=27.37 Aligned_cols=206 Identities=9% Similarity=-0.015 Sum_probs=98.2
Q ss_pred CcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCC--CceEEEEECCCCCccccccC
Q 017381 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF--PNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~--~~~~~vy~s~~~~W~~~~~~ 187 (372)
+|-|++.... ..+.++||.+++...+.... ..-.+++++..++ +++...... ...+..++.. +.|....
T Consensus 152 ~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~--~~P~giavd~dG~---lyVad~~~~~~~~gv~~~~~~-~~~~~~~-- 222 (433)
T 4hw6_A 152 YDDLYWVGQR-DAFRHVDFVNQYVDIKTTNI--GQCADVNFTLNGD---MVVVDDQSSDTNTGIYLFTRA-SGFTERL-- 222 (433)
T ss_dssp TCEEEEECBT-SCEEEEETTTTEEEEECCCC--SCEEEEEECTTCC---EEEEECCSCTTSEEEEEECGG-GTTCCEE--
T ss_pred CCEEEEEeCC-CCEEEEECCCCEEEEeecCC--CCccEEEECCCCC---EEEEcCCCCcccceEEEEECC-CCeeccc--
Confidence 5766666543 78899999888877665411 1123555554333 555443211 1234444432 3333111
Q ss_pred CCCccccccCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCee-eccCCCCccccccCCCcccccceeeeccCCCe-E
Q 017381 188 GFPSMILSQSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIW-ETPNDANDHMTMMLPHELTFFRLVNDGEESNK-L 262 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w-~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L 262 (372)
.++ ......++.+ +|.+|+.......|..||+.+.+. ..+... .+... ...+... -+|+ |
T Consensus 223 ~~~-----~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~-------~~~~~-~~~ia~d--pdG~~L 287 (433)
T 4hw6_A 223 SLC-----NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM-------DTKGS-NFHIVWH--PTGDWA 287 (433)
T ss_dssp EEE-----ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC-------SCCSS-CEEEEEC--TTSSEE
T ss_pred ccc-----ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc-------CCCCC-cccEEEe--CCCCEE
Confidence 011 1112234444 689998876666799999986655 222101 11111 1123322 4565 8
Q ss_pred EEEEeeecCCccceEEEEEEcCCCC-E----EEEEecChHHHHHh-hh-hccCCCceEEEE---------eeCCEEEEEe
Q 017381 263 YLIGGVGRNGISTTMKLWELGCGGN-W----IEVERVPEMMCRKF-MS-VCYHNYDHVYCF---------WHQGMICVCC 326 (372)
Q Consensus 263 ~vv~~~~~~~~~~~i~vw~l~~~~~-W----~~v~~lp~~~~~~~-~~-~~~~~~~~~~~~---------~~~~~i~~~~ 326 (372)
|+... ....|.++.++..+. . .........-+.+- .. ..+ ....-.++ ..++.||+..
T Consensus 288 Yvad~-----~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~-~~P~giav~~n~~y~~dd~~g~lyvaD 361 (433)
T 4hw6_A 288 YIIYN-----GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARL-WGPNQGIFVKNEAYAGEEDEYDFYFCD 361 (433)
T ss_dssp EEEET-----TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBC-SSEEEEEEEECGGGTTSSCCEEEEEEE
T ss_pred EEEeC-----CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEE-cCCccEEEEccccccccCCCCcEEEEE
Confidence 88864 124555555543221 2 11111110000000 00 000 01112234 3456799998
Q ss_pred ecCCeEEEEECCCCceEECC
Q 017381 327 YTWPEILYYNVARRTWHWLP 346 (372)
Q Consensus 327 ~~~~~v~~yd~~~~~w~~v~ 346 (372)
...+.|..+|+ +++...+.
T Consensus 362 ~~n~~I~~~~~-~G~v~t~~ 380 (433)
T 4hw6_A 362 RDSHTVRVLTP-EGRVTTYA 380 (433)
T ss_dssp TTTTEEEEECT-TSEEEEEE
T ss_pred CCCCEEEEECC-CCCEEEEE
Confidence 77778999996 56666654
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=53.54 E-value=1.1e+02 Score=26.51 Aligned_cols=99 Identities=8% Similarity=-0.054 Sum_probs=52.0
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCc--eEEEEECCCCCccccccCCCCccccccCC
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPN--YAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~--~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (372)
..++++|..+++.+.+...........+.+.+.+. .|+......... .++++|..++..+.+. ..+.
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~--~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~--~~~~------- 284 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGS--AMAYVSYFKGQTDRVIYKANPETLENEEVM--VMPP------- 284 (396)
T ss_dssp CCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSS--CEEEEEEETTTCCEEEEEECTTTCCEEEEE--ECCS-------
T ss_pred ceEEEEECCCCceeEeeccCCCccccceEECCCCC--EEEEEecCCCCccceEEEEECCCCCeEEee--eCCC-------
Confidence 47888998887766665411011112233433222 344443332333 4899999888765554 2221
Q ss_pred CcccEEE--CCEEEEeee----------------CCcEEEEEecCCCeeec
Q 017381 199 HQEGVFY--KGSLYFTTP----------------EPFSIVRFDLENGIWET 231 (372)
Q Consensus 199 ~~~~v~~--~G~~y~~~~----------------~~~~i~~yD~~~~~w~~ 231 (372)
.. .++. +|++++... ....|..+|+.+.+...
T Consensus 285 ~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 334 (396)
T 3c5m_A 285 CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQK 334 (396)
T ss_dssp EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCE
T ss_pred CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEE
Confidence 01 2232 676555432 22468889988766543
No 168
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=53.03 E-value=1.1e+02 Score=26.24 Aligned_cols=207 Identities=7% Similarity=-0.077 Sum_probs=93.9
Q ss_pred ecCc-EEEEecCCCceEEEEeccccceeccCCC-CCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC-cccc
Q 017381 108 SSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFP-TYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKF 184 (372)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~~~~lP~~-~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~-W~~~ 184 (372)
+.+| +++... .++.+.+||..++++...... ........+.+.+.+ +.++.++. ...+.+|+..++. |...
T Consensus 61 ~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~--d~~v~i~d~~~~~~~~~~ 134 (372)
T 1k8k_C 61 APDSNRIVTCG-TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE---KKFAVGSG--SRVISICYFEQENDWWVC 134 (372)
T ss_dssp ETTTTEEEEEE-TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS---SEEEEEET--TSSEEEEEEETTTTEEEE
T ss_pred eCCCCEEEEEc-CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC---CEEEEEeC--CCEEEEEEecCCCcceee
Confidence 3355 444333 457899999988875433221 111122234443322 23444432 2456777766543 3322
Q ss_pred ccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccC--------CC-CccccccCC-Ccccccce
Q 017381 185 DIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPN--------DA-NDHMTMMLP-HELTFFRL 252 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~--------~p-~~~~~~~~p-~~~~~~~l 252 (372)
. .... ........+.+ +|...+.+.....+..||+......... .+ +..... +. .......+
T Consensus 135 ~--~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~ 208 (372)
T 1k8k_C 135 K--HIKK---PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE-SSSSCGWVHGV 208 (372)
T ss_dssp E--EECT---TCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE-CCCCSSCEEEE
T ss_pred e--eeec---ccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEe-cCCCCCeEEEE
Confidence 2 1100 00011112222 4665555655556889996422111000 00 000000 11 11111122
Q ss_pred eeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEE--EEeeCCEEEEEeecCC
Q 017381 253 VNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVY--CFWHQGMICVCCYTWP 330 (372)
Q Consensus 253 v~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~ 330 (372)
... -+|++++++. ....+.+|.+..... +..+.. ....+. ++..++.+++.+ ..+
T Consensus 209 ~~~--~~~~~l~~~~-----~d~~i~i~d~~~~~~---~~~~~~------------~~~~v~~~~~~~~~~~l~~~-~d~ 265 (372)
T 1k8k_C 209 CFS--ANGSRVAWVS-----HDSTVCLADADKKMA---VATLAS------------ETLPLLAVTFITESSLVAAG-HDC 265 (372)
T ss_dssp EEC--SSSSEEEEEE-----TTTEEEEEEGGGTTE---EEEEEC------------SSCCEEEEEEEETTEEEEEE-TTS
T ss_pred EEC--CCCCEEEEEe-----CCCEEEEEECCCCce---eEEEcc------------CCCCeEEEEEecCCCEEEEE-eCC
Confidence 211 3666555554 135789998853322 111110 001122 223456655555 567
Q ss_pred eEEEEECCC--CceEECCCCC
Q 017381 331 EILYYNVAR--RTWHWLPSCP 349 (372)
Q Consensus 331 ~v~~yd~~~--~~w~~v~~~~ 349 (372)
.+.+||+.+ ++|..+....
T Consensus 266 ~i~i~~~~~~~~~~~~~~~~~ 286 (372)
T 1k8k_C 266 FPVLFTYDSAAGKLSFGGRLD 286 (372)
T ss_dssp SCEEEEEETTTTEEEECCCCC
T ss_pred eEEEEEccCcCceEEEeeccC
Confidence 899999999 9998876554
No 169
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=52.55 E-value=1.4e+02 Score=29.12 Aligned_cols=111 Identities=14% Similarity=0.081 Sum_probs=62.6
Q ss_pred cCcEEEEecCCCceEEEEeccccc--eeccCCCCCC--------CCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCC
Q 017381 109 SKGLLCFSLPSSSSFLVCNLVTLS--SRTIDFPTYP--------FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD 178 (372)
Q Consensus 109 ~~Gll~~~~~~~~~~~v~NP~t~~--~~~lP~~~~~--------~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~ 178 (372)
.+|.|++... .+.++.+|+.|++ |+.-+..... ......++... +|++.. ....+..+|.++
T Consensus 76 ~~g~vyv~~~-~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~----~v~v~~---~dg~l~alD~~t 147 (677)
T 1kb0_A 76 VDGIMYVSAS-WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKG----KVYVGA---WDGRLIALDAAT 147 (677)
T ss_dssp ETTEEEEECG-GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETT----EEEEEC---TTSEEEEEETTT
T ss_pred ECCEEEEECC-CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECC----EEEEEc---CCCEEEEEECCC
Confidence 4777766543 4678889999988 5443322110 00112333321 555543 235788888877
Q ss_pred CC--ccccccCC-CCccccccCCCcccEEECCEEEEeeeC-----CcEEEEEecCCC--eeec
Q 017381 179 QS--WSKFDIDG-FPSMILSQSSHQEGVFYKGSLYFTTPE-----PFSIVRFDLENG--IWET 231 (372)
Q Consensus 179 ~~--W~~~~~~~-~p~~~~~~~~~~~~v~~~G~~y~~~~~-----~~~i~~yD~~~~--~w~~ 231 (372)
++ |+... . -+. ........++..+|.+|+.... ...|.+||.++. .|+.
T Consensus 148 G~~~W~~~~--~~~~~--~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 148 GKEVWHQNT--FEGQK--GSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp CCEEEEEET--TTTCC--SSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEeeecC--CcCcC--cCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 65 87654 1 111 0011234567789999986542 356999998765 4654
No 170
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=52.17 E-value=1.1e+02 Score=27.82 Aligned_cols=115 Identities=11% Similarity=0.122 Sum_probs=60.5
Q ss_pred ccEEEC-----CEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccc
Q 017381 201 EGVFYK-----GSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGIST 275 (372)
Q Consensus 201 ~~v~~~-----G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~ 275 (372)
.++.++ |.+|+.... ..|..+|+.+.+...+... +.. ...+... .+|+||+..... ...
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~-------~~~---P~giavd--~dG~lyVad~~~---~~~ 205 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTN-------IGQ---CADVNFT--LNGDMVVVDDQS---SDT 205 (433)
T ss_dssp CEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCC-------CSC---EEEEEEC--TTCCEEEEECCS---CTT
T ss_pred ceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecC-------CCC---ccEEEEC--CCCCEEEEcCCC---Ccc
Confidence 466776 899988765 5699999988877765311 111 1123323 577888886421 111
Q ss_pred eEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEee-CCEEEEEeecCCeEEEEECCCCce
Q 017381 276 TMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWH-QGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 276 ~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
.-.+..++..+.+.....++ .+. ....+ ++.. ++.||+.....+.|..||+.+++.
T Consensus 206 ~~gv~~~~~~~~~~~~~~~~-----~~~-----~P~gi-avd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 206 NTGIYLFTRASGFTERLSLC-----NAR-----GAKTC-AVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp SEEEEEECGGGTTCCEEEEE-----ECS-----SBCCC-EECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred cceEEEEECCCCeecccccc-----ccC-----CCCEE-EEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 22344444433332111111 000 01111 2322 566777765556788888876655
No 171
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=51.97 E-value=1.7e+02 Score=28.28 Aligned_cols=186 Identities=12% Similarity=0.023 Sum_probs=88.2
Q ss_pred eEEEEecccccee--ccCCCCCC-CCceeEEEEeCCCCEEEEEEeecC-CCceEEEEECCCCCccccccCCCCccccccC
Q 017381 122 SFLVCNLVTLSSR--TIDFPTYP-FDFELLTLVSTPSGYKIFMLFAKS-FPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (372)
Q Consensus 122 ~~~v~NP~t~~~~--~lP~~~~~-~~~~~~~~~~~~~~ykvv~~~~~~-~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (372)
.+++++.-|++-. .+-..+.. .......+.+. +.+ |+...... ....+++++..++.|+.+.. -..
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpD-G~~-l~~~~~~~~~~~~l~~~~~~~~~~~~l~~--~~~------ 272 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRD-GKY-LFVYILRGWSENDVYWKRPGEKDFRLLVK--GVG------ 272 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTT-SCC-EEEEEEETTTEEEEEEECTTCSSCEEEEE--CSS------
T ss_pred EEEEEECCCCchhceEEEecCCCCEEEEEEEECCC-CCE-EEEEEeCCCCceEEEEEcCCCCceEEeec--CCC------
Confidence 4888888887632 22211111 11122233222 223 33333222 34577777777777877651 110
Q ss_pred CCcccEEECCEEEEeee---CCcEEEEEecCCCe---eeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecC
Q 017381 198 SHQEGVFYKGSLYFTTP---EPFSIVRFDLENGI---WETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRN 271 (372)
Q Consensus 198 ~~~~~v~~~G~~y~~~~---~~~~i~~yD~~~~~---w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~ 271 (372)
.....+.-+|.+|+.+. ....|..+|+.+.+ |..+..+ .+.... ..+. - .+++|++....
T Consensus 273 ~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-------~~~~~l-~~~~-~--~~~~lv~~~~~--- 338 (695)
T 2bkl_A 273 AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE-------DSSASL-LSVS-I--VGGHLSLEYLK--- 338 (695)
T ss_dssp CCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC-------CSSCEE-EEEE-E--ETTEEEEEEEE---
T ss_pred ceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecC-------CCCCeE-EEEE-E--ECCEEEEEEEE---
Confidence 11223445777666654 24679999987643 6654311 112111 1122 1 47787776542
Q ss_pred CccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE---eeCCEEEEEeec---CCeEEEEECCCCceEEC
Q 017381 272 GISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF---WHQGMICVCCYT---WPEILYYNVARRTWHWL 345 (372)
Q Consensus 272 ~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~---~~~v~~yd~~~~~w~~v 345 (372)
.....+|.++..+. ....++.. ....+..+ ..++.+++.... ...+..||+.+++.+.+
T Consensus 339 --dg~~~l~~~~~~g~--~~~~l~~~-----------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 339 --DATSEVRVATLKGK--PVRTVQLP-----------GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELW 403 (695)
T ss_dssp --TTEEEEEEEETTCC--EEEECCCS-----------SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred --CCEEEEEEEeCCCC--eeEEecCC-----------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 23456777764444 12222210 00011111 123445444321 23588899988877655
Q ss_pred C
Q 017381 346 P 346 (372)
Q Consensus 346 ~ 346 (372)
.
T Consensus 404 ~ 404 (695)
T 2bkl_A 404 A 404 (695)
T ss_dssp E
T ss_pred e
Confidence 3
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=51.89 E-value=1.7e+02 Score=27.98 Aligned_cols=192 Identities=10% Similarity=-0.025 Sum_probs=92.5
Q ss_pred ceEEEEeccc------cceeccC-CCCCCCCceeEEEEeCCCCEEEEEEeecC-----CCceEEEEECC-CCCccccccC
Q 017381 121 SSFLVCNLVT------LSSRTID-FPTYPFDFELLTLVSTPSGYKIFMLFAKS-----FPNYAFVYDST-DQSWSKFDID 187 (372)
Q Consensus 121 ~~~~v~NP~t------~~~~~lP-~~~~~~~~~~~~~~~~~~~ykvv~~~~~~-----~~~~~~vy~s~-~~~W~~~~~~ 187 (372)
..++++|..+ ++.+.+. .-.. ......+.+. .-+|+...... ....+++++.. ++.+....
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~SpD--G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~-- 234 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR--FVTGPRLSPD--GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTR-- 234 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS--EECCCEECTT--SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEE--
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC--cccCceECCC--CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccE--
Confidence 4789999998 7766665 2211 1112233332 22444443322 22578999998 57443222
Q ss_pred CCCccccccCCCcccEEE-CCEEEEeeeCC--cEEEEEecCCCeeeccCCCCccccccCCCccc-ccceeeeccCCCeEE
Q 017381 188 GFPSMILSQSSHQEGVFY-KGSLYFTTPEP--FSIVRFDLENGIWETPNDANDHMTMMLPHELT-FFRLVNDGEESNKLY 263 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~-~G~~y~~~~~~--~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~-~~~lv~e~~~~g~L~ 263 (372)
.+.. .. ........+. +|++|+.+... ..|..+|+.+.++..+. ++. .....|.-.. ...+... -+|+++
T Consensus 235 ~l~~-~~-~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~-~~~~~p~w~~~~~~~~~~--~~~~~~ 308 (662)
T 3azo_A 235 TLLG-GP-EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLC-RRE-EEFAGPLWTPGMRWFAPL--ANGLIA 308 (662)
T ss_dssp EEEE-ET-TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESS-CCS-SBSSCCCCSTTCCSEEEC--TTSCEE
T ss_pred EeCC-CC-CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecc-ccc-ccccCccccccCceEeEe--CCCEEE
Confidence 1111 00 0011112233 68888776543 36889998777776643 200 0000011000 0112211 367877
Q ss_pred EEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEE--EeeCCEEEEEeecC---CeEEEEEC
Q 017381 264 LIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTW---PEILYYNV 337 (372)
Q Consensus 264 vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~---~~v~~yd~ 337 (372)
+... . ....+|.++..+. ...+ ... ...+.. ...++.+++..... ..+..+|+
T Consensus 309 ~~~~-----~-~~~~l~~~d~~~~~~~~l---~~~------------~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 309 VVHG-----K-GAAVLGILDPESGELVDA---AGP------------WTEWAATLTVSGTRAVGVAASPRTAYEVVELDT 367 (662)
T ss_dssp EEEB-----S-SSCEEEEEETTTTEEEEC---CSS------------CCEEEEEEEEETTEEEEEEEETTEEEEEEEEET
T ss_pred EEEE-----c-CccEEEEEECCCCcEEEe---cCC------------CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEEC
Confidence 6654 1 4568888875433 4332 110 011122 23456555554322 25788898
Q ss_pred CCCceEEC
Q 017381 338 ARRTWHWL 345 (372)
Q Consensus 338 ~~~~w~~v 345 (372)
.+++.+.+
T Consensus 368 ~~g~~~~l 375 (662)
T 3azo_A 368 VTGRARTI 375 (662)
T ss_dssp TTCCEEEE
T ss_pred CCCceEEe
Confidence 88887766
No 173
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=51.62 E-value=1.1e+02 Score=26.06 Aligned_cols=190 Identities=12% Similarity=0.053 Sum_probs=91.9
Q ss_pred ecCcEEEEecCCCceEEEEeccccceec-cCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
+.++-+++....++.+.+||..+++... +...+. ....+++.+.+ +.++.+. ....+.+|+..++.=...-
T Consensus 89 ~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~--~~~~~~~spdg---~~l~~g~--~dg~v~i~~~~~~~~~~~~- 160 (321)
T 3ow8_A 89 SHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV--DAWTLAFSPDS---QYLATGT--HVGKVNIFGVESGKKEYSL- 160 (321)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTT--CCCCEEECTTS---SEEEEEC--TTSEEEEEETTTCSEEEEE-
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCc--cEEEEEECCCC---CEEEEEc--CCCcEEEEEcCCCceeEEe-
Confidence 3344334444346889999998876432 221111 11234443322 2333332 3357888988765421111
Q ss_pred CCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEE
Q 017381 187 DGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYL 264 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~v 264 (372)
.. .......+.+ +|.....+.....|..||+.+.+....... ..... ..+... -+|++++
T Consensus 161 ---~~----~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~-------h~~~v--~~l~~s--pd~~~l~ 222 (321)
T 3ow8_A 161 ---DT----RGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG-------HAMPI--RSLTFS--PDSQLLV 222 (321)
T ss_dssp ---EC----SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCC--CEEEEC--TTSCEEE
T ss_pred ---cC----CCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-------cCCce--eEEEEc--CCCCEEE
Confidence 00 0001112222 566666666556799999987754332100 11111 122212 4777766
Q ss_pred EEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEE--eeCCEEEEEeecCCeEEEEECCCCce
Q 017381 265 IGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 265 v~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
.+. ....+.+|.+.. ++- +..+.. ....+.++ ..++..++.+...+.|.+||+++++-
T Consensus 223 s~s-----~dg~i~iwd~~~-~~~--~~~~~~------------h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 223 TAS-----DDGYIKIYDVQH-ANL--AGTLSG------------HASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp EEC-----TTSCEEEEETTT-CCE--EEEECC------------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEc-----CCCeEEEEECCC-cce--eEEEcC------------CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE
Confidence 654 235789998743 222 222210 01122222 23344455554567899999998754
Q ss_pred E
Q 017381 343 H 343 (372)
Q Consensus 343 ~ 343 (372)
.
T Consensus 283 ~ 283 (321)
T 3ow8_A 283 V 283 (321)
T ss_dssp E
T ss_pred E
Confidence 3
No 174
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=51.58 E-value=89 Score=30.47 Aligned_cols=122 Identities=14% Similarity=0.212 Sum_probs=60.8
Q ss_pred cccEEECCEEEEeeeCCcEEEEEecCCC--eeeccCCCCccccc-cCCCcccccceeeeccCCCeEEEEEeeecCCccce
Q 017381 200 QEGVFYKGSLYFTTPEPFSIVRFDLENG--IWETPNDANDHMTM-MLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTT 276 (372)
Q Consensus 200 ~~~v~~~G~~y~~~~~~~~i~~yD~~~~--~w~~i~~p~~~~~~-~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~ 276 (372)
..+++.+|++|..+.. ..+.++|.++. .|+.-. ....... ...+......+.. .+|+||+... ..
T Consensus 60 ~~P~v~~g~vyv~~~~-~~v~AlD~~tG~~~W~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~------dg- 127 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW-SRVIAVDAASGKELWRYDP-EVAKVKARTSCCDAVNRGVAL---WGDKVYVGTL------DG- 127 (668)
T ss_dssp CCCEEETTEEEEEEGG-GEEEEEETTTCCEEEEECC-CCCGGGGGGCTTCSCCCCCEE---EBTEEEEECT------TS-
T ss_pred cCCEEECCEEEEECCC-CeEEEEECCCChhceEECC-CCCccccccccccCCccceEE---ECCEEEEEcC------CC-
Confidence 3467889999987654 35999998754 576521 1000000 0000000112221 5777776542 12
Q ss_pred EEEEEEcC-CCC--EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCc--eEE
Q 017381 277 MKLWELGC-GGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRT--WHW 344 (372)
Q Consensus 277 i~vw~l~~-~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~--w~~ 344 (372)
.++.+|. .++ |+.-..-+.. .+. ...... ..++.||+.... .+.|.+||.++++ |+.
T Consensus 128 -~l~alD~~tG~~~W~~~~~~~~~--------~~~-~~~~P~-v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 128 -RLIALDAKTGKAIWSQQTTDPAK--------PYS-ITGAPR-VVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp -EEEEEETTTCCEEEEEECSCTTS--------SCB-CCSCCE-EETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred -EEEEEECCCCCEeeeeccCCCCC--------cce-ecCCCE-EECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 3555553 344 8754211100 000 011112 247778876432 3579999999985 543
No 175
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=50.39 E-value=1.2e+02 Score=25.85 Aligned_cols=56 Identities=9% Similarity=0.093 Sum_probs=28.1
Q ss_pred CCceEEEEeccc-cce-eccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCc
Q 017381 119 SSSSFLVCNLVT-LSS-RTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (372)
Q Consensus 119 ~~~~~~v~NP~t-~~~-~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W 181 (372)
.++.+.+||..+ ++. ..+... ......+.+.+. . +.++.++ ....+.+||..++.-
T Consensus 195 ~dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~--~-~~l~~~~--~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 195 KDGKISKYDVSNNYEYVDSIDLH--EKSISDMQFSPD--L-TYFITSS--RDTNSFLVDVSTLQV 252 (369)
T ss_dssp TTSEEEEEETTTTTEEEEEEECC--SSCEEEEEECTT--S-SEEEEEE--TTSEEEEEETTTCCE
T ss_pred CCCEEEEEECCCCcEeEEEEecC--CCceeEEEECCC--C-CEEEEec--CCceEEEEECCCCce
Confidence 457899999987 332 222211 111223333332 2 2233332 235788999887653
No 176
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=49.97 E-value=1.1e+02 Score=25.53 Aligned_cols=33 Identities=9% Similarity=0.282 Sum_probs=21.9
Q ss_pred CCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecCh
Q 017381 259 SNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPE 296 (372)
Q Consensus 259 ~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~ 296 (372)
+|++++.++ ....+.||.++..+.|..+..+..
T Consensus 317 ~~~~l~s~~-----~dg~v~iw~~~~~~~~~~~~~~~~ 349 (351)
T 3f3f_A 317 TGTILSSAG-----DDGKVRLWKATYSNEFKCMSVITA 349 (351)
T ss_dssp SSCCEEEEE-----TTSCEEEEEECTTSCEEEEEEEC-
T ss_pred CCCEEEEec-----CCCcEEEEecCcCcchhheeehcc
Confidence 565555544 135799999976666988887753
No 177
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=49.59 E-value=1.3e+02 Score=26.02 Aligned_cols=212 Identities=7% Similarity=-0.076 Sum_probs=84.5
Q ss_pred ecCcEEEEecCCCceEEEEeccccc-eeccCCCC-CCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC-cccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLS-SRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKF 184 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~-~~~lP~~~-~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~-W~~~ 184 (372)
+.+|-.++....++.+.+||..+++ +..+.... .......+.+.+. . +.++.++ ....+.+||..++. |...
T Consensus 64 s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~~~~--~d~~i~iwd~~~~~~~~~~ 138 (377)
T 3dwl_C 64 APKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN--E-DKFAVGS--GARVISVCYFEQENDWWVS 138 (377)
T ss_dssp CTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTT--S-SCCEEEE--SSSCEEECCC-----CCCC
T ss_pred eCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCC--C-CEEEEEe--cCCeEEEEEECCcccceee
Confidence 4455322233235789999999887 33222211 1111122333222 2 2333333 23467888887654 5444
Q ss_pred ccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCC---------CccccccCCCccccccee
Q 017381 185 DIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDA---------NDHMTMMLPHELTFFRLV 253 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p---------~~~~~~~~p~~~~~~~lv 253 (372)
. .+.. +....-..+.+ +|.....+.....+..||+.+.+......+ +..... +........+.
T Consensus 139 ~--~~~~---~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~ 212 (377)
T 3dwl_C 139 K--HLKR---PLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAE-YPSGGWVHAVG 212 (377)
T ss_dssp E--EECS---SCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEEC-CCCSSSEEEEE
T ss_pred e--Eeec---ccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhc-ccCCceEEEEE
Confidence 3 1111 00011112222 455555555555688999864432221100 000000 10100011111
Q ss_pred eeccCCCeEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEE--EEeeCCEEEEEeecCC
Q 017381 254 NDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVY--CFWHQGMICVCCYTWP 330 (372)
Q Consensus 254 ~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~ 330 (372)
.. -+|++++.+. ....+.+|.+..... ...+..+.. ....+. ++..++.+++.+ ..+
T Consensus 213 ~s--p~~~~l~~~~-----~d~~i~iwd~~~~~~~~~~~~~~~~------------~~~~v~~~~~s~~~~~l~~~-~~~ 272 (377)
T 3dwl_C 213 FS--PSGNALAYAG-----HDSSVTIAYPSAPEQPPRALITVKL------------SQLPLRSLLWANESAIVAAG-YNY 272 (377)
T ss_dssp EC--TTSSCEEEEE-----TTTEEC-CEECSTTSCEEECCCEEC------------SSSCEEEEEEEETTEEEEEE-SSS
T ss_pred EC--CCCCEEEEEe-----CCCcEEEEECCCCCCcceeeEeecC------------CCCceEEEEEcCCCCEEEEE-cCC
Confidence 11 3666555544 135789999865443 333333211 011122 234456555544 355
Q ss_pred eEEEEECCCCceEECCCCCC
Q 017381 331 EILYYNVARRTWHWLPSCPS 350 (372)
Q Consensus 331 ~v~~yd~~~~~w~~v~~~~~ 350 (372)
.+++|+.....|+.......
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~ 292 (377)
T 3dwl_C 273 SPILLQGNESGWAHTRDLDA 292 (377)
T ss_dssp SEEEECCCC---CCSBCCCS
T ss_pred cEEEEEeCCCceEEEeeecc
Confidence 67799998888776655443
No 178
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=48.50 E-value=21 Score=26.12 Aligned_cols=43 Identities=5% Similarity=-0.053 Sum_probs=26.0
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEe
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLF 163 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~ 163 (372)
-+++++||.+++|..........+.-.+..+...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~g~~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 11 ATVMLYDDGNKRWLPAGTGPQAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EECBEECTTTSSCCBSSCSCCCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceeECCCCCCCccEEEEEEeCCCCEEEEEEEE
Confidence 4678899999998643321112222334445667788888765
No 179
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=48.40 E-value=20 Score=26.53 Aligned_cols=40 Identities=15% Similarity=-0.072 Sum_probs=25.4
Q ss_pred ceEEEEecccc-ceeccCCCCCCCCceeEEEEeCCCCEEEEEEe
Q 017381 121 SSFLVCNLVTL-SSRTIDFPTYPFDFELLTLVSTPSGYKIFMLF 163 (372)
Q Consensus 121 ~~~~v~NP~t~-~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~ 163 (372)
.+++.+||.|+ .|....... ..-.+-.+...+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~~---~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKHA---VTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSSC---EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCCc---eEEEEEEcCCCCEEEEEEcc
Confidence 57899999996 897644321 11123334566778988765
No 180
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=47.91 E-value=1.4e+02 Score=29.10 Aligned_cols=116 Identities=15% Similarity=0.190 Sum_probs=61.0
Q ss_pred cccEEECCEEEEeeeCCcEEEEEecCC--CeeeccCCCCccccccCCCc--------ccccceeeeccCCCeEEEEEeee
Q 017381 200 QEGVFYKGSLYFTTPEPFSIVRFDLEN--GIWETPNDANDHMTMMLPHE--------LTFFRLVNDGEESNKLYLIGGVG 269 (372)
Q Consensus 200 ~~~v~~~G~~y~~~~~~~~i~~yD~~~--~~w~~i~~p~~~~~~~~p~~--------~~~~~lv~e~~~~g~L~vv~~~~ 269 (372)
..+++.+|.+|..+... .+.++|.++ ..|+.-. . .+.. ......+. .+|+||+...
T Consensus 64 ~~P~v~~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~-~-------~~~~~~~~~~~~~~~~~~~~---~~g~v~v~~~-- 129 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPFS-VVYALDARDGRLIWKYDP-Q-------SDRHRAGEACCDAVNRGVAV---WKGKVYVGVL-- 129 (689)
T ss_dssp CCCEEETTEEEEECGGG-CEEEEETTTCCEEEEECC-C-------CCGGGGGGCTTCSCCCCCEE---ETTEEEEECT--
T ss_pred ecCEEECCEEEEEcCCC-eEEEEECCCCceeEEEcC-C-------CCccccccccccCCCCccEE---ECCEEEEEcc--
Confidence 34678899999876543 499999875 4676521 1 1110 01112232 5788777542
Q ss_pred cCCccceEEEEEEcC-CCC--EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeec-----CCeEEEEECCCCc
Q 017381 270 RNGISTTMKLWELGC-GGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYT-----WPEILYYNVARRT 341 (372)
Q Consensus 270 ~~~~~~~i~vw~l~~-~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~v~~yd~~~~~ 341 (372)
... ++.+|. .++ |+.-....... .+. ...... ..++.||+.... .+.|.+||.+|++
T Consensus 130 ----dg~--l~AlDa~TG~~~W~~~~~~~~~~-------~~~-~~~sP~-v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~ 194 (689)
T 1yiq_A 130 ----DGR--LEAIDAKTGQRAWSVDTRADHKR-------SYT-ITGAPR-VVNGKVVIGNGGAEFGVRGYVTAYDAETGK 194 (689)
T ss_dssp ----TSE--EEEEETTTCCEEEEEECCSCTTS-------CCB-CCSCCE-EETTEEEECCBCTTTCCBCEEEEEETTTCC
T ss_pred ----CCE--EEEEECCCCCEeeeecCcCCCCC-------Ccc-ccCCcE-EECCEEEEEeCCCccCCCCEEEEEECCCCc
Confidence 123 444553 344 87543211100 000 011112 247778775432 3579999999986
Q ss_pred --eEE
Q 017381 342 --WHW 344 (372)
Q Consensus 342 --w~~ 344 (372)
|+.
T Consensus 195 ~~W~~ 199 (689)
T 1yiq_A 195 EAWRF 199 (689)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 554
No 181
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=46.46 E-value=1.4e+02 Score=25.58 Aligned_cols=152 Identities=9% Similarity=-0.031 Sum_probs=71.2
Q ss_pred EEEecCcEEEEecCCCceEEEEecccccee-ccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccc
Q 017381 105 LLSSSKGLLCFSLPSSSSFLVCNLVTLSSR-TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (372)
Q Consensus 105 ~~~s~~Gll~~~~~~~~~~~v~NP~t~~~~-~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~ 183 (372)
+.++.+|-+.+-.. .+.+.++|..+++.. ..... .......+.+.+.... +.++.++ ....+.+||..++.-..
T Consensus 89 ~s~s~D~~i~~w~~-~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~-~~l~s~s--~dg~i~~wd~~~~~~~~ 163 (343)
T 3lrv_A 89 ISRGPCNRLLLLYP-GNQITILDSKTNKVLREIEVD-SANEIIYMYGHNEVNT-EYFIWAD--NRGTIGFQSYEDDSQYI 163 (343)
T ss_dssp EEECSTTEEEEEET-TTEEEEEETTTCCEEEEEECC-CSSCEEEEECCC---C-CEEEEEE--TTCCEEEEESSSSCEEE
T ss_pred EEecCCCeEEEEEc-cCceEEeecCCcceeEEeecC-CCCCEEEEEcCCCCCC-CEEEEEe--CCCcEEEEECCCCcEEE
Confidence 34556665444332 356777787777622 22111 1111122222220012 3344333 33578899988765422
Q ss_pred cccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeee--ccCCCCccccccCCCcccccceeeeccCC
Q 017381 184 FDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWE--TPNDANDHMTMMLPHELTFFRLVNDGEES 259 (372)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~--~i~~p~~~~~~~~p~~~~~~~lv~e~~~~ 259 (372)
.. .... ......+.+ +|.+...+.....|..||+.+.+-. .+. ..+......+.-. -+
T Consensus 164 ~~--~~~~-----~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~---------~~h~~~v~~l~fs--~~ 225 (343)
T 3lrv_A 164 VH--SAKS-----DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP---------VDEEAKIKEVKFA--DN 225 (343)
T ss_dssp EE--CCCS-----SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC---------CCTTSCEEEEEEC--TT
T ss_pred EE--ecCC-----CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe---------ccCCCCEEEEEEe--CC
Confidence 21 0110 001122232 5677666666667999999876433 211 1011111122211 46
Q ss_pred CeEEEEEeeecCCccceEEEEEEcCC
Q 017381 260 NKLYLIGGVGRNGISTTMKLWELGCG 285 (372)
Q Consensus 260 g~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (372)
|+.++.+. + ..+.+|.+...
T Consensus 226 g~~l~s~~--~----~~v~iwd~~~~ 245 (343)
T 3lrv_A 226 GYWMVVEC--D----QTVVCFDLRKD 245 (343)
T ss_dssp SSEEEEEE--S----SBEEEEETTSS
T ss_pred CCEEEEEe--C----CeEEEEEcCCC
Confidence 77666654 1 38999988643
No 182
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=46.03 E-value=2e+02 Score=27.32 Aligned_cols=209 Identities=9% Similarity=0.001 Sum_probs=97.4
Q ss_pred CcE-EEEecCCCceEEEEecc--c-cceeccCCCCC---CCCceeEEEEeCCCCEEEEEEeec-------CCCceEEEEE
Q 017381 110 KGL-LCFSLPSSSSFLVCNLV--T-LSSRTIDFPTY---PFDFELLTLVSTPSGYKIFMLFAK-------SFPNYAFVYD 175 (372)
Q Consensus 110 ~Gl-l~~~~~~~~~~~v~NP~--t-~~~~~lP~~~~---~~~~~~~~~~~~~~~ykvv~~~~~-------~~~~~~~vy~ 175 (372)
+.. |.+.......++++|.. + ++.+.|...+. ......+++.+.+. +|+..... .....+++++
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~--~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERG--EVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTT--EEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCC--EEEEEEecccCCCCCCceeEEEEEE
Confidence 335 66665445689999987 4 66666654321 11122344444333 45444432 1124788888
Q ss_pred CCC------CCccccccCCCCccccccCCCcccEE-ECC-EEEEeeeCC-------cEEEEEecC-CC---eeeccCCCC
Q 017381 176 STD------QSWSKFDIDGFPSMILSQSSHQEGVF-YKG-SLYFTTPEP-------FSIVRFDLE-NG---IWETPNDAN 236 (372)
Q Consensus 176 s~~------~~W~~~~~~~~p~~~~~~~~~~~~v~-~~G-~~y~~~~~~-------~~i~~yD~~-~~---~w~~i~~p~ 236 (372)
..+ +.-+.+. . .+. . ......+ -+| .+++..... ..|..+|+. +. +...+. .
T Consensus 168 ~~~~~~~~~~~~~~l~--~--~~~--~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-~- 238 (662)
T 3azo_A 168 LDGSAAADRSAVRELS--D--DAH--R-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-G- 238 (662)
T ss_dssp TTSTTTTCGGGSEESS--C--SCS--S-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-E-
T ss_pred CCCCccccCCceeEEE--e--cCC--C-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-C-
Confidence 887 5443332 0 100 0 0111111 256 455554332 468899988 55 333321 0
Q ss_pred ccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCC-CCEEEEEecChHHHHHhhhhccCCCceEEE
Q 017381 237 DHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG-GNWIEVERVPEMMCRKFMSVCYHNYDHVYC 315 (372)
Q Consensus 237 ~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~-~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~ 315 (372)
-.......... . -+|+|+++... .....||.++.. +++..+....... ....+........
T Consensus 239 ------~~~~~~~~~~~-s--pdg~l~~~~~~-----~~~~~l~~~~~~~~~~~~l~~~~~~~----~~p~w~~~~~~~~ 300 (662)
T 3azo_A 239 ------GPEEAIAQAEW-A--PDGSLIVATDR-----TGWWNLHRVDPATGAATQLCRREEEF----AGPLWTPGMRWFA 300 (662)
T ss_dssp ------ETTBCEEEEEE-C--TTSCEEEEECT-----TSSCEEEEECTTTCCEEESSCCSSBS----SCCCCSTTCCSEE
T ss_pred ------CCCceEcceEE-C--CCCeEEEEECC-----CCCeEEEEEECCCCceeecccccccc----cCccccccCceEe
Confidence 00111111122 1 48887665531 134568887753 4476553321110 0000000001123
Q ss_pred EeeCCEEEEEeec-CCeEEEEECCCCceEECCC
Q 017381 316 FWHQGMICVCCYT-WPEILYYNVARRTWHWLPS 347 (372)
Q Consensus 316 ~~~~~~i~~~~~~-~~~v~~yd~~~~~w~~v~~ 347 (372)
+..++.+++.... ...|..+|+.+++.+.+..
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 301 PLANGLIAVVHGKGAAVLGILDPESGELVDAAG 333 (662)
T ss_dssp ECTTSCEEEEEBSSSCEEEEEETTTTEEEECCS
T ss_pred EeCCCEEEEEEEcCccEEEEEECCCCcEEEecC
Confidence 3334555555433 2246667998888877753
No 183
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=44.17 E-value=89 Score=26.49 Aligned_cols=111 Identities=7% Similarity=-0.043 Sum_probs=56.4
Q ss_pred EEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCC
Q 017381 208 SLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGN 287 (372)
Q Consensus 208 ~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~ 287 (372)
.+||.......|..||.. .+.+... .+.... ..+... .+|+|++.... ... |+.++.+++
T Consensus 58 ~l~~~d~~~~~i~~~~~~-g~~~~~~---------~~~~~~-~gl~~d--~dG~l~v~~~~-----~~~--v~~~~~~g~ 117 (305)
T 3dr2_A 58 TLVWSDLVGRRVLGWRED-GTVDVLL---------DATAFT-NGNAVD--AQQRLVHCEHG-----RRA--ITRSDADGQ 117 (305)
T ss_dssp EEEEEETTTTEEEEEETT-SCEEEEE---------ESCSCE-EEEEEC--TTSCEEEEETT-----TTE--EEEECTTSC
T ss_pred EEEEEECCCCEEEEEeCC-CCEEEEe---------CCCCcc-ceeeEC--CCCCEEEEECC-----CCE--EEEECCCCC
Confidence 589888766679999984 4444332 122211 122223 58998877531 123 444454455
Q ss_pred EEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEee-----------------cCCeEEEEECCCCceEECC
Q 017381 288 WIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCY-----------------TWPEILYYNVARRTWHWLP 346 (372)
Q Consensus 288 W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----------------~~~~v~~yd~~~~~w~~v~ 346 (372)
.+.+...... . ....... .++..++.+|+... ....|..||+++++.+.+.
T Consensus 118 ~~~~~~~~~~-----~--~~~~~~~-i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 118 AHLLVGRYAG-----K--RLNSPND-LIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp EEEEECEETT-----E--ECSCCCC-EEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred EEEEEeccCC-----C--ccCCCCC-EEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 5444221100 0 0000111 23344566788521 0245899999888877653
No 184
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=43.49 E-value=1.2e+02 Score=29.67 Aligned_cols=74 Identities=9% Similarity=-0.024 Sum_probs=41.0
Q ss_pred eEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCC
Q 017381 147 LLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLEN 226 (372)
Q Consensus 147 ~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~ 226 (372)
+++++...+ +|+++.. ....+++|+.....-+.+. .... .+. .....++..+.+||.......|..+|..+
T Consensus 544 Glavd~~~~--~LY~aD~--~~~~I~~~d~dG~~~~~~~--~~~~-~~~--~P~glavd~~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 544 GITLDLLSG--RLYWVDS--KLHSISSIDVNGGNRKTIL--EDEK-RLA--HPFSLAVFEDKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp CEEECTTTC--CEEEEET--TTTEEEEECSSSSCCEEEC--CCSS-SCS--SCCCCEEETTEEEEECSTTTCEEEEETTT
T ss_pred EEEEeccCC--EEEEEec--CCCeEEEEccCCCceEEEE--ecCC-cCC--CceEeEEECCEEEEEeCCCCeEEEEEccC
Confidence 455553322 5665542 3457888887643322222 1111 111 12223456779999987777799999876
Q ss_pred Cee
Q 017381 227 GIW 229 (372)
Q Consensus 227 ~~w 229 (372)
.+-
T Consensus 615 G~~ 617 (699)
T 1n7d_A 615 GSD 617 (699)
T ss_dssp EEE
T ss_pred CCc
Confidence 554
No 185
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=43.37 E-value=1.5e+02 Score=24.88 Aligned_cols=180 Identities=8% Similarity=0.052 Sum_probs=84.1
Q ss_pred CceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCC
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSH 199 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~ 199 (372)
++.+.+||..+++....-... ......+.+.+.+ +.++.++ ....+.+||..++.=... +.. ....
T Consensus 44 dg~i~iw~~~~~~~~~~~~~h-~~~v~~~~~~~~~---~~l~s~~--~d~~i~vwd~~~~~~~~~----~~~----~~~~ 109 (312)
T 4ery_A 44 DKLIKIWGAYDGKFEKTISGH-KLGISDVAWSSDS---NLLVSAS--DDKTLKIWDVSSGKCLKT----LKG----HSNY 109 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTCCEEEE----EEC----CSSC
T ss_pred CCeEEEEeCCCcccchhhccC-CCceEEEEEcCCC---CEEEEEC--CCCEEEEEECCCCcEEEE----EcC----CCCC
Confidence 567888888877654322110 1112233343322 3344443 235788999877642111 000 0001
Q ss_pred cccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceE
Q 017381 200 QEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (372)
Q Consensus 200 ~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i 277 (372)
...+.+ +|.....+.....|..||+.+.+....... ..... ..+... .+|++++++.. ...+
T Consensus 110 v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------~~~~v--~~~~~~--~~~~~l~~~~~-----d~~i 173 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPA-------HSDPV--SAVHFN--RDGSLIVSSSY-----DGLC 173 (312)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC-------CSSCE--EEEEEC--TTSSEEEEEET-----TSCE
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecC-------CCCcE--EEEEEc--CCCCEEEEEeC-----CCcE
Confidence 111222 355555555555699999987654321101 11111 112111 46777666542 3578
Q ss_pred EEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEE--EEeeCCEEEEEeecCCeEEEEECCCCceE
Q 017381 278 KLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVY--CFWHQGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 278 ~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
.+|.+.. +.- +..+... ....+. .+..++..++.....+.|.+||+++++-.
T Consensus 174 ~~wd~~~-~~~--~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 174 RIWDTAS-GQC--LKTLIDD-----------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp EEEETTT-CCE--EEEECCS-----------SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred EEEECCC-Cce--eeEEecc-----------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 9998743 221 1111100 001122 22333444444545678999999987643
No 186
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=42.33 E-value=1.6e+02 Score=25.08 Aligned_cols=187 Identities=10% Similarity=0.000 Sum_probs=84.6
Q ss_pred ecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccc
Q 017381 116 SLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILS 195 (372)
Q Consensus 116 ~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~ 195 (372)
.+..++.+.|||..+++....-.+. .......++.-.. ...+++.++ ....+.+||..++.-...-. .-+
T Consensus 53 tgs~D~~v~vW~~~~~~~~~~~~l~-gh~~~v~~~~~~~-~~~~l~s~s--~D~~i~lWd~~~~~~~~~~~-~~~----- 122 (321)
T 3ow8_A 53 TGSLDDLVKVWKWRDERLDLQWSLE-GHQLGVVSVDISH-TLPIAASSS--LDAHIRLWDLENGKQIKSID-AGP----- 122 (321)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECS-SSSEEEEEE--TTSEEEEEETTTTEEEEEEE-CCT-----
T ss_pred EEcCCCCEEEEECCCCCeeeeeeec-cCCCCEEEEEECC-CCCEEEEEe--CCCcEEEEECCCCCEEEEEe-CCC-----
Confidence 3334577888887765533211111 1111112222111 113444443 34578899988764321110 000
Q ss_pred cCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCc
Q 017381 196 QSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (372)
Q Consensus 196 ~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~ 273 (372)
.....+.+ +|.....+.....+..||+.+.+-.... . .... ....+... -+|++++.+..
T Consensus 123 --~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~-~-------~~~~-~v~~~~~s--pdg~~lasg~~----- 184 (321)
T 3ow8_A 123 --VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL-D-------TRGK-FILSIAYS--PDGKYLASGAI----- 184 (321)
T ss_dssp --TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEE-E-------CSSS-CEEEEEEC--TTSSEEEEEET-----
T ss_pred --ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEe-c-------CCCc-eEEEEEEC--CCCCEEEEEcC-----
Confidence 01111222 4555555555567888998765433211 0 1111 11112212 47787776552
Q ss_pred cceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCCceE
Q 017381 274 STTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 274 ~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
...+.+|.+.. + ..+..+.... ..-...++..++..++.+...+.|.+||+++.+..
T Consensus 185 dg~i~iwd~~~-~--~~~~~~~~h~----------~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 185 DGIINIFDIAT-G--KLLHTLEGHA----------MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 241 (321)
T ss_dssp TSCEEEEETTT-T--EEEEEECCCS----------SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE
T ss_pred CCeEEEEECCC-C--cEEEEEcccC----------CceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee
Confidence 35788997742 2 2222221100 00011223334445555545567999999887553
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=41.76 E-value=2.4e+02 Score=26.85 Aligned_cols=110 Identities=11% Similarity=-0.042 Sum_probs=59.5
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCC
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (372)
++.+|+.......+..+|..+.+-... ++.+..-+.+... -+|+...++. . ...+.+|.+..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~----------i~~g~~p~~v~~S--pDGr~lyv~~--~---dg~V~viD~~~- 227 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTV----------LDTGYAVHISRLS--ASGRYLFVIG--R---DGKVNMIDLWM- 227 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEE----------EECSSCEEEEEEC--TTSCEEEEEE--T---TSEEEEEETTS-
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEE----------EeCCCCccceEEC--CCCCEEEEEc--C---CCeEEEEECCC-
Confidence 457777776667899999988754321 1121111122212 4676433433 1 23567776531
Q ss_pred CCEEEEEecChHHHHHhhhhccCCCceEEEEe-----eCCEEEEEeecCCeEEEEECCCCceEE
Q 017381 286 GNWIEVERVPEMMCRKFMSVCYHNYDHVYCFW-----HQGMICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 286 ~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
.+-+.+.+++... ...-..+. ++..+|+..+..+.+.++|..+.+-.+
T Consensus 228 ~t~~~v~~i~~G~-----------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~ 280 (567)
T 1qks_A 228 KEPTTVAEIKIGS-----------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK 280 (567)
T ss_dssp SSCCEEEEEECCS-----------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEE
T ss_pred CCCcEeEEEecCC-----------CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEE
Confidence 1223344443110 01122334 466889998888899999988875543
No 188
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=41.71 E-value=1.5e+02 Score=24.57 Aligned_cols=66 Identities=11% Similarity=0.013 Sum_probs=37.2
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCC-CCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY-PFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS 180 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~-~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~ 180 (372)
|.+++|.... ++.+.|||..|++...+-.... ......+++.+.+ +.++.++ ....+.+|+.++++
T Consensus 34 S~~~~lAvg~--D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~---~~l~sgs--~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 34 SSGNVLAVAL--DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEG---NYLAVGT--SSAEVQLWDVQQQK 100 (318)
T ss_dssp CTTSEEEEEE--TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTTE
T ss_pred CCCCEEEEEe--CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCC---CEEEEEE--CCCcEEEeecCCce
Confidence 5566654443 4789999999998654332211 1112234443322 3344443 34578899988764
No 189
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=40.95 E-value=95 Score=29.72 Aligned_cols=78 Identities=12% Similarity=0.104 Sum_probs=46.0
Q ss_pred ceEEEEECCCCC--ccccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCe--eeccCCCCccccccCC
Q 017381 169 NYAFVYDSTDQS--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGI--WETPNDANDHMTMMLP 244 (372)
Q Consensus 169 ~~~~vy~s~~~~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~--w~~i~~p~~~~~~~~p 244 (372)
..+..+|..+++ |+... ..+. .....+..+|.+|. +.....+.+||.++.+ |+. . +|
T Consensus 466 G~l~A~D~~tG~~~W~~~~--~~~~------~~g~~~tagglvf~-g~~dg~l~A~D~~tG~~lW~~-~---------~~ 526 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKE--HLPL------WAGVLATAGNLVFT-GTGDGYFKAFDAKSGKELWKF-Q---------TG 526 (582)
T ss_dssp EEEEEECTTTCCEEEEEEE--SSCC------CSCCEEETTTEEEE-ECTTSEEEEEETTTCCEEEEE-E---------CS
T ss_pred ceEEEEECCCCCEEEEecC--CCCC------cccceEeCCCEEEE-ECCCCcEEEEECCCCCEEEEe-c---------CC
Confidence 467778888775 87654 2221 11122334677776 4444579999988654 654 2 44
Q ss_pred CcccccceeeeccCCCeEEEEEe
Q 017381 245 HELTFFRLVNDGEESNKLYLIGG 267 (372)
Q Consensus 245 ~~~~~~~lv~e~~~~g~L~vv~~ 267 (372)
.......++.+ .+|++|++..
T Consensus 527 ~g~~a~P~~y~--~~G~qYv~~~ 547 (582)
T 1flg_A 527 SGIVSPPITWE--QDGEQYLGVT 547 (582)
T ss_dssp SCCCSCCEEEE--ETTEEEEEEE
T ss_pred CCcccCceEEE--ECCEEEEEEE
Confidence 44333334323 6899998865
No 190
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=39.51 E-value=2.8e+02 Score=27.03 Aligned_cols=192 Identities=9% Similarity=0.025 Sum_probs=89.1
Q ss_pred ecCc-EEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 108 SSKG-LLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 108 s~~G-ll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
+.+| ++.... .++.+.|||..+++....-... ......+.+.+.+. .+ +.++ ....+.+|+..++ |....
T Consensus 64 s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~-~~~v~~~~~s~~~~--~l-~~~~--~dg~i~vw~~~~~-~~~~~- 134 (814)
T 3mkq_A 64 IARKNWIIVGS-DDFRIRVFNYNTGEKVVDFEAH-PDYIRSIAVHPTKP--YV-LSGS--DDLTVKLWNWENN-WALEQ- 134 (814)
T ss_dssp EGGGTEEEEEE-TTSEEEEEETTTCCEEEEEECC-SSCEEEEEECSSSS--EE-EEEE--TTSEEEEEEGGGT-SEEEE-
T ss_pred eCCCCEEEEEe-CCCeEEEEECCCCcEEEEEecC-CCCEEEEEEeCCCC--EE-EEEc--CCCEEEEEECCCC-ceEEE-
Confidence 4455 444433 3689999999888754321111 11112333333221 23 3333 3457889988765 22222
Q ss_pred CCCCccccccCCCccc-EEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccC--CCe
Q 017381 187 DGFPSMILSQSSHQEG-VFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEE--SNK 261 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~-v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~--~g~ 261 (372)
.+.. ....... .+. +|...+.+.....|..||+.+.+-....... ...... .+... . +|.
T Consensus 135 -~~~~----~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~------~~~~v~--~~~~~--~~~~~~ 199 (814)
T 3mkq_A 135 -TFEG----HEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG------QERGVN--YVDYY--PLPDKP 199 (814)
T ss_dssp -EEEC----CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC------CTTCCC--EEEEC--CSTTCC
T ss_pred -EEcC----CCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC------CCCCEE--EEEEE--ECCCCC
Confidence 0110 0011122 233 4556666666667999998754322211000 111111 11111 2 677
Q ss_pred EEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEEE--EeeCCEEEEEeecCCeEEEEECCC
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVYC--FWHQGMICVCCYTWPEILYYNVAR 339 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~v~~yd~~~ 339 (372)
+++++. ....+.+|.+... . .+..+.. ....+.+ +..++.+++.+...+.|.+||+.+
T Consensus 200 ~l~~~~-----~dg~i~~~d~~~~-~--~~~~~~~------------~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 200 YMITAS-----DDLTIKIWDYQTK-S--CVATLEG------------HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp EEEEEC-----TTSEEEEEETTTT-E--EEEEEEC------------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEEEe-----CCCEEEEEECCCC-c--EEEEEcC------------CCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 666654 2357899976432 2 2222210 0111222 223333444454557799999988
Q ss_pred CceE
Q 017381 340 RTWH 343 (372)
Q Consensus 340 ~~w~ 343 (372)
++..
T Consensus 260 ~~~~ 263 (814)
T 3mkq_A 260 YKVE 263 (814)
T ss_dssp CSEE
T ss_pred CcEE
Confidence 6543
No 191
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=38.78 E-value=2.2e+02 Score=25.55 Aligned_cols=25 Identities=4% Similarity=-0.053 Sum_probs=17.1
Q ss_pred CCEEEEEeecCCeEEEEECCCCceE
Q 017381 319 QGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 319 ~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
++..++.+...+.|.+||+++++..
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 4444555545678999999998643
No 192
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=38.61 E-value=1.7e+02 Score=24.45 Aligned_cols=109 Identities=10% Similarity=-0.022 Sum_probs=49.7
Q ss_pred ecCcEEEEecCCCceEEEEecccccee--ccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSR--TIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFD 185 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~--~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~ 185 (372)
+-+|-+++.+..++.+.+||..++.-. .+.. .......+++.+.. . .+++.++ .+..+.+||..++.=...-
T Consensus 106 ~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~--h~~~v~~v~~~p~~-~-~~l~sgs--~D~~v~iwd~~~~~~~~~~ 179 (304)
T 2ynn_A 106 HPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG--HEHFVMCVAFNPKD-P-STFASGC--LDRTVKVWSLGQSTPNFTL 179 (304)
T ss_dssp CSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC--CCSCEEEEEECTTC-T-TEEEEEE--TTSEEEEEETTCSSCSEEE
T ss_pred cCCCCEEEEECCCCeEEEEECCCCcchhhhhcc--cCCcEEEEEECCCC-C-CEEEEEe--CCCeEEEEECCCCCcccee
Confidence 334423333334678999998776321 1111 11112233443221 1 2333333 3357889998654211000
Q ss_pred cCCCCccccccCCCcccEEE----CCEEEEeeeCCcEEEEEecCCCee
Q 017381 186 IDGFPSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 186 ~~~~p~~~~~~~~~~~~v~~----~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
.. ........+.+ ++.+...++....|..+|+.+.+.
T Consensus 180 ----~~---~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 180 ----TT---GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (304)
T ss_dssp ----EC---CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE
T ss_pred ----cc---CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc
Confidence 00 00000111211 445555566666899999987654
No 193
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=38.11 E-value=1.9e+02 Score=24.69 Aligned_cols=152 Identities=11% Similarity=0.067 Sum_probs=75.9
Q ss_pred CcEEEEecC-CCceEEEEeccccceeccCCCCC-------C-CCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC
Q 017381 110 KGLLCFSLP-SSSSFLVCNLVTLSSRTIDFPTY-------P-FDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS 180 (372)
Q Consensus 110 ~Gll~~~~~-~~~~~~v~NP~t~~~~~lP~~~~-------~-~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~ 180 (372)
+|.+++... ....+.++|+.......+..... . ..-.++++++..+ .+++... ....+.+|+..+++
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g--~l~v~d~--~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD--QLCVADR--ENGRIQCFKTDTKE 229 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTT--EEEEEET--TTTEEEEEETTTCC
T ss_pred CCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC--EEEEEEC--CCCEEEEEECCCCc
Confidence 777777663 46789999965444444432111 0 1123455654322 5665542 34689999998776
Q ss_pred ccccccCCCCccccccCCCcccEEECCEEEEee-------eCCcEEEEEecCCCeeeccCCCCccccccCCCcccc-cce
Q 017381 181 WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTT-------PEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTF-FRL 252 (372)
Q Consensus 181 W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~-------~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~-~~l 252 (372)
....- ..+. ... .....++..|.+|... .....+..+|..+.+......+ .+..... ..+
T Consensus 230 ~~~~~--~~~~--~~~-~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~-------~~~~~~~p~~i 297 (329)
T 3fvz_A 230 FVREI--KHAS--FGR-NVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP-------VRKHFDMPHDI 297 (329)
T ss_dssp EEEEE--CCTT--TTT-CEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC-------SSSCCSSEEEE
T ss_pred EEEEE--eccc--cCC-CcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC-------CCCccCCeeEE
Confidence 53322 1111 000 0001112224444433 3334688999887765443211 1111111 123
Q ss_pred eeeccCCCeEEEEEeeecCCccceEEEEEEcC
Q 017381 253 VNDGEESNKLYLIGGVGRNGISTTMKLWELGC 284 (372)
Q Consensus 253 v~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~ 284 (372)
... -+|.||+... ...+|.+|.++.
T Consensus 298 a~~--~dG~lyvad~-----~~~~I~~~~~~~ 322 (329)
T 3fvz_A 298 VAS--EDGTVYIGDA-----HTNTVWKFTLTE 322 (329)
T ss_dssp EEC--TTSEEEEEES-----SSCCEEEEEEEE
T ss_pred EEC--CCCCEEEEEC-----CCCEEEEEeCCc
Confidence 323 5788998865 235778887753
No 194
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=37.69 E-value=1.9e+02 Score=24.50 Aligned_cols=56 Identities=11% Similarity=-0.103 Sum_probs=29.2
Q ss_pred CCceEEEEeccccceec-cCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCc
Q 017381 119 SSSSFLVCNLVTLSSRT-IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~-lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W 181 (372)
.++.+.+||..+++... +..- ......+.+.+. . +.++.++ ....+.+||..++.-
T Consensus 52 ~dg~i~vwd~~~~~~~~~~~~h--~~~v~~~~~~~~--~-~~l~s~~--~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 52 KDSSASVWYSLNGERLGTLDGH--TGTIWSIDVDCF--T-KYCVTGS--ADYSIKLWDVSNGQC 108 (369)
T ss_dssp SSSCEEEEETTTCCEEEEECCC--SSCEEEEEECTT--S-SEEEEEE--TTTEEEEEETTTCCE
T ss_pred CCCEEEEEeCCCchhhhhhhhc--CCcEEEEEEcCC--C-CEEEEEe--CCCeEEEEECCCCcE
Confidence 35788999988876433 2211 111223334332 2 2333332 245788999887653
No 195
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=37.61 E-value=8.6 Score=34.53 Aligned_cols=29 Identities=17% Similarity=0.244 Sum_probs=17.5
Q ss_pred cEEECCEEEEeeeCCcEEEEEecCCC--eeec
Q 017381 202 GVFYKGSLYFTTPEPFSIVRFDLENG--IWET 231 (372)
Q Consensus 202 ~v~~~G~~y~~~~~~~~i~~yD~~~~--~w~~ 231 (372)
+++.+|.+|.-+.+ ..+.++|.++. .|+.
T Consensus 5 P~v~~~~v~~gs~d-g~v~a~d~~tG~~~W~~ 35 (369)
T 2hz6_A 5 VTLPETLLFVSTLD-GSLHAVSKRTGSIKWTL 35 (369)
T ss_dssp ---CTTEEEEEETT-SEEEEEETTTCCEEEEE
T ss_pred CeeeCCEEEEEcCC-CEEEEEECCCCCEEEEe
Confidence 45566777765543 46999998755 5654
No 196
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=37.51 E-value=2e+02 Score=24.89 Aligned_cols=25 Identities=8% Similarity=0.112 Sum_probs=15.9
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeee
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWE 230 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~ 230 (372)
+|...+.+.....+..||+.+.+..
T Consensus 160 ~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 160 DGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp TSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCEEEEEecCCeEEEEECCCCcEE
Confidence 4555545555556889998776543
No 197
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=36.71 E-value=2.1e+02 Score=24.74 Aligned_cols=120 Identities=10% Similarity=0.011 Sum_probs=54.4
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccC---C--CcccccceeeeccCCCeEEEEEeeecCCccceEEEE
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMML---P--HELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLW 280 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~---p--~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw 280 (372)
+| +.+.+.....+..||+.+.+..... . . . .......+... -+|++++++... .....+.+|
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~-~-------~~~~h~~~~~~i~~i~~~--~~~~~l~~~~~d--~~~g~i~i~ 263 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELSTLRPLYNF-E-------SQHSMINNSNSIRSVKFS--PQGSLLAIAHDS--NSFGCITLY 263 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTTTEEEEEE-E-------CCC---CCCCCEEEEEEC--SSTTEEEEEEEE--TTEEEEEEE
T ss_pred Cc-eEEEEeCCCcEEEEECCCCceeEEE-e-------ccccccccCCccceEEEC--CCCCEEEEEecC--CCCceEEEE
Confidence 46 5445555567999999876543211 1 1 0 01111122211 367776666521 111578999
Q ss_pred EEcCCCCEEEEEecCh--HHHHHhhhhccCCCceEEEE--eeCCEEEEEeecCCeEEEEECCCCce
Q 017381 281 ELGCGGNWIEVERVPE--MMCRKFMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 281 ~l~~~~~W~~v~~lp~--~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
.+..... +..+.. ........ .+.....+.++ ..++..++.+...+.|.+||+++++-
T Consensus 264 d~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 264 ETEFGER---IGSLSVPTHSSQASLG-EFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp ETTTCCE---EEEECBC--------C-CBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred ECCCCcc---cceeccCccccccccc-ccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 8753322 222211 00000000 00011223333 22344455555567899999998754
No 198
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=36.68 E-value=2e+02 Score=24.57 Aligned_cols=195 Identities=12% Similarity=0.040 Sum_probs=93.4
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
..+|.+++.+...+.+.++|+.+++...+... .....+++++.+ ++++... ..+.+||..+++.+.+.
T Consensus 58 ~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~---~~v~~i~~~~dg---~l~v~~~----~gl~~~d~~~g~~~~~~-- 125 (326)
T 2ghs_A 58 PASGTAWWFNILERELHELHLASGRKTVHALP---FMGSALAKISDS---KQLIASD----DGLFLRDTATGVLTLHA-- 125 (326)
T ss_dssp TTTTEEEEEEGGGTEEEEEETTTTEEEEEECS---SCEEEEEEEETT---EEEEEET----TEEEEEETTTCCEEEEE--
T ss_pred CCCCEEEEEECCCCEEEEEECCCCcEEEEECC---CcceEEEEeCCC---eEEEEEC----CCEEEEECCCCcEEEEe--
Confidence 33454444443356889999998876554321 122344555432 3443321 35889999888876654
Q ss_pred CCCccccccCCCcccEEE--CCEEEEeeeC------CcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCC
Q 017381 188 GFPSMILSQSSHQEGVFY--KGSLYFTTPE------PFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEES 259 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v~~--~G~~y~~~~~------~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~ 259 (372)
..+. .... .....+.+ +|.+|+.... ...|..|| +.+...+.... ..|. .+... -+
T Consensus 126 ~~~~-~~~~-~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~-----~~~~-----~i~~s--~d 189 (326)
T 2ghs_A 126 ELES-DLPG-NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI-----SIPN-----SICFS--PD 189 (326)
T ss_dssp CSST-TCTT-EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE-----SSEE-----EEEEC--TT
T ss_pred eCCC-CCCC-CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC-----cccC-----CeEEc--CC
Confidence 2221 0100 01122333 5787665432 24688888 45554431000 0111 22211 46
Q ss_pred Ce-EEEEEeeecCCccceEEEEEEc-CCC-CE---EEEEecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEE
Q 017381 260 NK-LYLIGGVGRNGISTTMKLWELG-CGG-NW---IEVERVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEIL 333 (372)
Q Consensus 260 g~-L~vv~~~~~~~~~~~i~vw~l~-~~~-~W---~~v~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~ 333 (372)
|+ ||+... ....|.+|.++ ..+ .. ..+..++.. .....-.++..++.+++.....+.|.
T Consensus 190 g~~lyv~~~-----~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~----------~~~p~gi~~d~~G~lwva~~~~~~v~ 254 (326)
T 2ghs_A 190 GTTGYFVDT-----KVNRLMRVPLDARTGLPTGKAEVFIDSTGI----------KGGMDGSVCDAEGHIWNARWGEGAVD 254 (326)
T ss_dssp SCEEEEEET-----TTCEEEEEEBCTTTCCBSSCCEEEEECTTS----------SSEEEEEEECTTSCEEEEEETTTEEE
T ss_pred CCEEEEEEC-----CCCEEEEEEcccccCCcccCceEEEECCCC----------CCCCCeeEECCCCCEEEEEeCCCEEE
Confidence 64 666543 12456666654 223 21 111122100 00011223334556888776567899
Q ss_pred EEECCCCceEEC
Q 017381 334 YYNVARRTWHWL 345 (372)
Q Consensus 334 ~yd~~~~~w~~v 345 (372)
.||+..+....+
T Consensus 255 ~~d~~g~~~~~i 266 (326)
T 2ghs_A 255 RYDTDGNHIARY 266 (326)
T ss_dssp EECTTCCEEEEE
T ss_pred EECCCCCEEEEE
Confidence 999965544443
No 199
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=36.20 E-value=3.4e+02 Score=27.09 Aligned_cols=115 Identities=14% Similarity=0.055 Sum_probs=60.1
Q ss_pred ccEEEC---CEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceE
Q 017381 201 EGVFYK---GSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (372)
Q Consensus 201 ~~v~~~---G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i 277 (372)
.+++++ +.|||.......|.++|+....-..+...+ ...|. .|++. -.+|.||+.... ....
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~----l~~P~-----gIaVD-p~~g~LYwtD~g----~~~~- 538 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN----GSKPR-----AIVVD-PVHGFMYWTDWG----TPAK- 538 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT----TCCEE-----EEEEE-TTTTEEEEEECS----SSCE-
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCC----CCCcc-----eEEEe-cCCCCEEEecCC----CCCe-
Confidence 356664 699999877778999999765443331110 00122 34321 136889988641 1134
Q ss_pred EEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEE--EEe-eCCEEEEEeecCCeEEEEECCCCceEEC
Q 017381 278 KLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVY--CFW-HQGMICVCCYTWPEILYYNVARRTWHWL 345 (372)
Q Consensus 278 ~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~--~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~v 345 (372)
|++.+.+++ =..+..- ...... ++. .++.||+.....+.|.++|+....-+.+
T Consensus 539 -I~~~~~dG~~~~~lv~~--------------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v 595 (791)
T 3m0c_C 539 -IKKGGLNGVDIYSLVTE--------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 595 (791)
T ss_dssp -EEEEETTSCCEEEEECS--------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred -EEEEecCCCceEEEEeC--------------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEE
Confidence 444444444 2111110 001111 222 4677888776566788888766544443
No 200
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=36.01 E-value=2.2e+02 Score=24.82 Aligned_cols=181 Identities=8% Similarity=-0.069 Sum_probs=90.2
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCc
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQ 200 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~ 200 (372)
..+...++...+...+.... ....+++++...+ +|++... ....+..++..++.-+.+. .. .+ ...
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~--~~~~~l~~d~~~~--~ly~~D~--~~~~I~r~~~~g~~~~~~~--~~---~~---~~p 118 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNL--ENAIALDFHHRRE--LVFWSDV--TLDRILRANLNGSNVEEVV--ST---GL---ESP 118 (349)
T ss_dssp SCEEEECTTSCCEEEEECSC--SCEEEEEEETTTT--EEEEEET--TTTEEEEEETTSCSCEEEE--CS---SC---SCC
T ss_pred cceEEEeCCCCeeEEeecCC--CceEEEEEecccc--EEEEEec--cCCceEEEecCCCCceEEE--eC---CC---CCc
Confidence 44666666665544432211 1123455553322 6666542 3357888888766543332 00 01 112
Q ss_pred ccEEE---CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceE
Q 017381 201 EGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTM 277 (372)
Q Consensus 201 ~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i 277 (372)
.++.+ +|.+||.......|..+|+....-..+...+ ...|. .+++. -.+|.||+.... ....
T Consensus 119 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~----l~~P~-----~iavd-p~~g~ly~td~~----~~~~- 183 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS----LEKPR-----AIALH-PMEGTIYWTDWG----NTPR- 183 (349)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT----CSCEE-----EEEEE-TTTTEEEEEECS----SSCE-
T ss_pred cEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC----CCCcc-----eEEEe-cCcCeEEEeccC----CCCE-
Confidence 34554 5899999877678999998754333221010 00122 23321 137889888641 1133
Q ss_pred EEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEECCCCceE
Q 017381 278 KLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWH 343 (372)
Q Consensus 278 ~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~ 343 (372)
|++++.+++ -+.+.. .. + ....-.++. .++.||+.....+.|..+|+....-+
T Consensus 184 -I~r~~~dG~~~~~~~~--~~-----~-----~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~ 238 (349)
T 3v64_C 184 -IEASSMDGSGRRIIAD--TH-----L-----FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 238 (349)
T ss_dssp -EEEEETTSCSCEESCC--SS-----C-----SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred -EEEEeCCCCCcEEEEE--CC-----C-----CCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE
Confidence 455444443 111100 00 0 001122333 57788988766678888988765433
No 201
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=35.73 E-value=3e+02 Score=26.34 Aligned_cols=115 Identities=8% Similarity=0.058 Sum_probs=61.3
Q ss_pred CcEEEEecCCCceEEEEec-cccc--eeccCCCCCC--------CCceeEEE--EeCCCCEEEEEEeecCCCceEEEEEC
Q 017381 110 KGLLCFSLPSSSSFLVCNL-VTLS--SRTIDFPTYP--------FDFELLTL--VSTPSGYKIFMLFAKSFPNYAFVYDS 176 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP-~t~~--~~~lP~~~~~--------~~~~~~~~--~~~~~~ykvv~~~~~~~~~~~~vy~s 176 (372)
+|.|++.....+.++.+|+ .|++ |+.-+..... ......++ ......-+|++.. ....+..+|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t---~dg~l~AlDa 138 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ---LDGNVAALNA 138 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC---TTSEEEEEET
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc---CCCEEEEEEC
Confidence 6766665532467888899 8887 5443322110 00112334 1110111255432 2357788888
Q ss_pred CCCC--ccccccCCCCccccccCCCcccEEECCEEEEeee-----CCcEEEEEecCCC--eeec
Q 017381 177 TDQS--WSKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTP-----EPFSIVRFDLENG--IWET 231 (372)
Q Consensus 177 ~~~~--W~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~-----~~~~i~~yD~~~~--~w~~ 231 (372)
++++ |+... .-+. ........+++.+|++|+-.. ....|.+||.++. .|+.
T Consensus 139 ~TG~~~W~~~~--~~~~--~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 139 ETGETVWKVEN--SDIK--VGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp TTCCEEEEEEC--CCGG--GTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCCCEEEeecC--CCCC--ccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence 7775 87543 1110 001123456778999987543 1347999999865 4764
No 202
>2khu_A Immunoglobulin G-binding protein G, DNA polymerase IOTA; UBM, ubiquitin-binding domain, translesion synthesis, TLS, ubiquitin-binding protein; NMR {Streptococcus SP} PDB: 2khw_A 2l0f_B*
Probab=35.64 E-value=25 Score=24.56 Aligned_cols=22 Identities=27% Similarity=0.671 Sum_probs=18.7
Q ss_pred CCCCChhhhcCCCHHHHHHHHc
Q 017381 5 RREMDPAIWSRLPEDLLDHVLS 26 (372)
Q Consensus 5 ~~~~~~~~~~~LP~dll~~IL~ 26 (372)
++..||+....||.|+..+.|+
T Consensus 65 Ps~VDP~VFyeLP~eVQ~ELla 86 (108)
T 2khu_A 65 PSDIDPQVFYELPEAVQKELLA 86 (108)
T ss_dssp CTTCCHHHHTTSCHHHHHHHHH
T ss_pred CCCCCHHHHHHccHHHHHHHHH
Confidence 4568899999999999998875
No 203
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=35.53 E-value=2.4e+02 Score=25.17 Aligned_cols=182 Identities=10% Similarity=0.010 Sum_probs=88.9
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC----ccccccCCCCcccccc
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS----WSKFDIDGFPSMILSQ 196 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~----W~~~~~~~~p~~~~~~ 196 (372)
..+...++.++++..+-+. .....+++++... -+|++... ....+..++..+.. ...+. . . .+
T Consensus 92 ~~I~~i~l~~~~~~~~~~~--~~~~~~l~~d~~~--~~lywsD~--~~~~I~~~~~~g~~~~~~~~~~~--~--~-~~-- 158 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVAS--NRIYWSDL--SQRMICSTQLDRAHGVSSYDTVI--S--R-DI-- 158 (400)
T ss_dssp TEEEEECTTSCSCEEEECS--CSCEEEEEEETTT--TEEEEEET--TTTEEEEEEC------CCCEEEE--C--S-SC--
T ss_pred ceeEEEccCCcceeEeccc--cCcceEEeeeecc--CceEEEec--CCCeEEEEEcccCCCCCcceEEE--e--C-CC--
Confidence 5666777776665444221 1122345555322 26776543 23467777775421 11111 0 0 01
Q ss_pred CCCcccEEE---CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCc
Q 017381 197 SSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (372)
Q Consensus 197 ~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~ 273 (372)
....++++ +|.+||.......|.++|+....-..+...+ ...|. .+++. -.+|.||+.... .
T Consensus 159 -~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~----~~~P~-----~iavd-p~~g~ly~td~~----~ 223 (400)
T 3p5b_L 159 -QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN----GSKPR-----AIVVD-PVHGFMYWTDWG----T 223 (400)
T ss_dssp -SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECS----SCCEE-----EEEEE-TTTTEEEEEECS----S
T ss_pred -CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCC----CCCcc-----eEEEe-cccCeEEEEeCC----C
Confidence 12235554 6899999877778999998765443321100 00122 23321 137889987641 1
Q ss_pred cceEEEEEEcCCCC--EEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEECCCCceEEC
Q 017381 274 STTMKLWELGCGGN--WIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWHWL 345 (372)
Q Consensus 274 ~~~i~vw~l~~~~~--W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~v 345 (372)
... |++.+.+++ -+.+.. .+ ....-.++. .++.||+.....+.|.++|+....-+.+
T Consensus 224 ~~~--I~~~~~dG~~~~~~~~~-------~l------~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 224 PAK--IKKGGLNGVDIYSLVTE-------NI------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp SCC--EEEEETTSCSCEEEECS-------SC------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred CCE--EEEEeCCCCccEEEEEC-------CC------CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 233 444444443 222211 00 001112232 4678888876667888888876544443
No 204
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=35.46 E-value=2.4e+02 Score=25.03 Aligned_cols=150 Identities=8% Similarity=0.057 Sum_probs=71.2
Q ss_pred CCceEEEEeccc--cceeccCCCC--C-CCCceeEEEE--eC-CCCEEEEEEeecCCCceEEEEEC--CCCCccccccCC
Q 017381 119 SSSSFLVCNLVT--LSSRTIDFPT--Y-PFDFELLTLV--ST-PSGYKIFMLFAKSFPNYAFVYDS--TDQSWSKFDIDG 188 (372)
Q Consensus 119 ~~~~~~v~NP~t--~~~~~lP~~~--~-~~~~~~~~~~--~~-~~~ykvv~~~~~~~~~~~~vy~s--~~~~W~~~~~~~ 188 (372)
..++++++||.+ .+-++|.... . .....-+|++ .. .+..+++++........+++|+. .++....+. .
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~--~ 158 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLK--T 158 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEE--E
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEe--c
Confidence 357899999984 3444443222 1 1122334443 32 33456777766544567777655 444444443 2
Q ss_pred CCccccccCCCcccEEECCEEEEeee-----------------CCcEEEEEecCCCeeeccCCCCccccccCCCcccccc
Q 017381 189 FPSMILSQSSHQEGVFYKGSLYFTTP-----------------EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFR 251 (372)
Q Consensus 189 ~p~~~~~~~~~~~~v~~~G~~y~~~~-----------------~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~ 251 (372)
+....+ .....-.+.-+|.+|+.+. ....+..||+. +.+.+... ...|.+
T Consensus 159 ~~g~~~-~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~-----l~~pNG----- 225 (355)
T 3sre_A 159 IRHKLL-PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEG-----FDFANG----- 225 (355)
T ss_dssp ECCTTC-SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEE-----ESSEEE-----
T ss_pred cccCCC-CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecC-----CcccCc-----
Confidence 211011 1111223445788876542 01357788874 23322100 002333
Q ss_pred eeeeccCCC-eEEEEEeeecCCccceEEEEEEcCCCCEEE
Q 017381 252 LVNDGEESN-KLYLIGGVGRNGISTTMKLWELGCGGNWIE 290 (372)
Q Consensus 252 lv~e~~~~g-~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~ 290 (372)
+... -+| .||+... ....|.+|.++.+++...
T Consensus 226 ia~s--pDg~~lYvadt-----~~~~I~~~~~~~~g~l~~ 258 (355)
T 3sre_A 226 INIS--PDGKYVYIAEL-----LAHKIHVYEKHANWTLTP 258 (355)
T ss_dssp EEEC--TTSSEEEEEEG-----GGTEEEEEEECTTSCEEE
T ss_pred ceEC--CCCCEEEEEeC-----CCCeEEEEEECCCCcEec
Confidence 2211 456 4666653 235677777765555443
No 205
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=35.42 E-value=1e+02 Score=25.89 Aligned_cols=92 Identities=14% Similarity=0.012 Sum_probs=46.7
Q ss_pred eEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCCCcc
Q 017381 122 SFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQE 201 (372)
Q Consensus 122 ~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~ 201 (372)
.+.++|+.+++...++..+.......+.+.+.+ . .+++. ...+.+||..+++-...- ..+. ...
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-~-~l~~~-----~~~v~~~d~~~~~~~~~~--~~~~-------~~~ 283 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNPAK-T-RAFGA-----YNVLESFDLEKNASIKRV--PLPH-------SYY 283 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECTTS-S-EEEEE-----ESEEEEEETTTTEEEEEE--ECSS-------CCC
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECCCC-C-EEEEe-----CCeEEEEECCCCcCccee--cCCC-------cee
Confidence 468999999886543322211112234443322 2 34443 257899998775432111 1110 111
Q ss_pred cEEE--CCEEEEeeeCCcEEEEEecCCCee
Q 017381 202 GVFY--KGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 202 ~v~~--~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
.+.+ +|...+++.....|..||+.+.+.
T Consensus 284 ~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 284 SVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp EEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred eEEECCCCCEEEEEcCCCcEEEEECcCCcE
Confidence 2333 465434444456799999987654
No 206
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=35.38 E-value=2.4e+02 Score=25.11 Aligned_cols=113 Identities=14% Similarity=0.097 Sum_probs=58.9
Q ss_pred EecCc-EEEEec--CCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccc
Q 017381 107 SSSKG-LLCFSL--PSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSK 183 (372)
Q Consensus 107 ~s~~G-ll~~~~--~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~ 183 (372)
-+-+| .|.+.. +....+++||..+++...+..... ....+.+.+. .-.++..........++++|..++.-+.
T Consensus 230 ~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~spd--g~~l~~~s~~~g~~~i~~~d~~~~~~~~ 305 (415)
T 2hqs_A 230 FSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS--NNTEPTWFPD--SQNLAFTSDQAGRPQVYKVNINGGAPQR 305 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS--CEEEEEECTT--SSEEEEEECTTSSCEEEEEETTSSCCEE
T ss_pred EcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC--cccceEECCC--CCEEEEEECCCCCcEEEEEECCCCCEEE
Confidence 35566 344332 223579999999988766653221 1223334332 2244444433344578888988776443
Q ss_pred cccCCCCccccccCCCcccEEE--CCE-EEEeeeC--CcEEEEEecCCCeeecc
Q 017381 184 FDIDGFPSMILSQSSHQEGVFY--KGS-LYFTTPE--PFSIVRFDLENGIWETP 232 (372)
Q Consensus 184 ~~~~~~p~~~~~~~~~~~~v~~--~G~-~y~~~~~--~~~i~~yD~~~~~w~~i 232 (372)
+. .... ....+.+ +|. +++...+ ...|..+|+.+.+...+
T Consensus 306 l~--~~~~-------~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 306 IT--WEGS-------QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp CC--CSSS-------EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred Ee--cCCC-------cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 32 1110 1111222 454 4444332 35789999988777654
No 207
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=35.21 E-value=2e+02 Score=24.16 Aligned_cols=25 Identities=12% Similarity=0.046 Sum_probs=19.4
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeee
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWE 230 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~ 230 (372)
++.+|..+.....|..+|+.+.+..
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~ 34 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVY 34 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEE
Confidence 5677777777778999999887654
No 208
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=34.71 E-value=2e+02 Score=23.91 Aligned_cols=27 Identities=7% Similarity=0.117 Sum_probs=17.6
Q ss_pred CEEEEEeecCCeEEEEECCCC-ceEECC
Q 017381 320 GMICVCCYTWPEILYYNVARR-TWHWLP 346 (372)
Q Consensus 320 ~~i~~~~~~~~~v~~yd~~~~-~w~~v~ 346 (372)
+..++.+...+.|.+||+.++ .|+.+.
T Consensus 318 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 318 GTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp SCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred CCEEEEecCCCcEEEEecCcCcchhhee
Confidence 344444445567999999985 666544
No 209
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=34.46 E-value=2.2e+02 Score=24.33 Aligned_cols=182 Identities=12% Similarity=0.004 Sum_probs=89.2
Q ss_pred ceEEEEeccccceecc-CCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCC---Cc-cccccCCCCccccc
Q 017381 121 SSFLVCNLVTLSSRTI-DFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQ---SW-SKFDIDGFPSMILS 195 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~l-P~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~---~W-~~~~~~~~p~~~~~ 195 (372)
+.+.+.++.+++...+ +... ...++.++...+ +|++... ....+..++..+. +- ...- +. .+
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~---~p~g~~~d~~~~--~ly~~D~--~~~~I~~~~~~g~~~~~~~~~~~----~~-~~- 76 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLR---NVVALDTEVASN--RIYWSDL--SQRMICSTQLDRAHGVSSYDTVI----SR-DI- 76 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCS---SEEEEEEETTTT--EEEEEET--TTTEEEEEEC--------CEEEE----CS-SC-
T ss_pred CeEEEEECCCcceEehhcCCC---ceEEEEEEeCCC--EEEEEEC--CCCcEEEEECCCCCCCcccEEEE----eC-CC-
Confidence 4566777777665443 3221 223455553322 6776543 3457788887651 21 1111 00 01
Q ss_pred cCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCC
Q 017381 196 QSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNG 272 (372)
Q Consensus 196 ~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~ 272 (372)
....++++ +|.+||.......|.++|+....-..+.... ...|. .+++. -.+|.||+....
T Consensus 77 --~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~----~~~P~-----~iavd-p~~g~ly~~d~~---- 140 (316)
T 1ijq_A 77 --QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN----GSKPR-----AIVVD-PVHGFMYWTDWG---- 140 (316)
T ss_dssp --SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT----TCCEE-----EEEEE-TTTTEEEEEECS----
T ss_pred --CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC----CCCcc-----eEEeC-CCCCEEEEEccC----
Confidence 11234544 5799999877778999998754333221000 00222 23321 137888887641
Q ss_pred ccceEEEEEEcCCCCEEE-EEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeecCCeEEEEECCCCceEEC
Q 017381 273 ISTTMKLWELGCGGNWIE-VERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYTWPEILYYNVARRTWHWL 345 (372)
Q Consensus 273 ~~~~i~vw~l~~~~~W~~-v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~v~~yd~~~~~w~~v 345 (372)
... .|++++.+++-.+ +..-. + ....-.++. .++.||+.....+.|.++|+....-+.+
T Consensus 141 ~~~--~I~~~~~dG~~~~~~~~~~------~------~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 141 TPA--KIKKGGLNGVDIYSLVTEN------I------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp SSC--EEEEEETTSCCEEEEECSS------C------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCC--eEEEEcCCCCCeEEEEECC------C------CCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 112 3555554554222 21100 0 001112233 4678999887677899999876544433
No 210
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=32.71 E-value=1.3e+02 Score=29.02 Aligned_cols=77 Identities=12% Similarity=0.219 Sum_probs=45.2
Q ss_pred ceEEEEECCCCC--ccccccCCCCccccccCCCcccEE-ECCEEEEeeeCCcEEEEEecCCCe--eeccCCCCccccccC
Q 017381 169 NYAFVYDSTDQS--WSKFDIDGFPSMILSQSSHQEGVF-YKGSLYFTTPEPFSIVRFDLENGI--WETPNDANDHMTMML 243 (372)
Q Consensus 169 ~~~~vy~s~~~~--W~~~~~~~~p~~~~~~~~~~~~v~-~~G~~y~~~~~~~~i~~yD~~~~~--w~~i~~p~~~~~~~~ 243 (372)
..+..+|..+++ |+... ..|. ....+. .+|.+|. +.....+.+||.++.+ |+. . +
T Consensus 453 G~l~A~D~~tG~~~W~~~~--~~~~-------~~g~~~tagg~vf~-gt~dg~l~A~D~~tG~~lW~~-~---------l 512 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKME--RFAV-------WGGTMATAGDLVFY-GTLDGYLKARDSDTGDLLWKF-K---------I 512 (599)
T ss_dssp EEEEEECTTTCCEEEEEEE--SSCC-------CSBCEEETTTEEEE-ECTTSEEEEEETTTCCEEEEE-E---------C
T ss_pred CeEEEEECCCCCEEeEecC--CCCc-------cCcceEecCCEEEE-ECCCCeEEEEECCCCCEEEEe-e---------C
Confidence 367777887765 87654 2221 112233 4567776 4444579999998764 654 2 4
Q ss_pred CCcccccceeeeccCCCeEEEEEe
Q 017381 244 PHELTFFRLVNDGEESNKLYLIGG 267 (372)
Q Consensus 244 p~~~~~~~lv~e~~~~g~L~vv~~ 267 (372)
|.+.....++.+ .+|++|++..
T Consensus 513 ~~g~~~~P~~y~--~~G~qyv~~~ 534 (599)
T 1w6s_A 513 PSGAIGYPMTYT--HKGTQYVAIY 534 (599)
T ss_dssp SSCCCSCCEEEE--ETTEEEEEEE
T ss_pred CCCcEeccEEEE--eCCEEEEEEE
Confidence 444333333324 6899988765
No 211
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=32.62 E-value=2.5e+02 Score=24.47 Aligned_cols=108 Identities=9% Similarity=0.001 Sum_probs=53.5
Q ss_pred ecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccC
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDID 187 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~ 187 (372)
+.+|-.++.+..++.+.+||..+++....-... ......+.+.+.+ +.++.++ ....+.+||..++.= ..
T Consensus 106 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~~~---~~l~s~s--~d~~i~iwd~~~~~~--~~-- 175 (420)
T 3vl1_A 106 KLQMRRFILGTTEGDIKVLDSNFNLQREIDQAH-VSEITKLKFFPSG---EALISSS--QDMQLKIWSVKDGSN--PR-- 175 (420)
T ss_dssp CSSSCEEEEEETTSCEEEECTTSCEEEEETTSS-SSCEEEEEECTTS---SEEEEEE--TTSEEEEEETTTCCC--CE--
T ss_pred ecCCCEEEEEECCCCEEEEeCCCcceeeecccc-cCccEEEEECCCC---CEEEEEe--CCCeEEEEeCCCCcC--ce--
Confidence 445532333334678999999888765442111 1112234443322 2333333 235789999876531 11
Q ss_pred CCCccccccCCCcccE-EE-CCEEEEeeeCCcEEEEEecCCCee
Q 017381 188 GFPSMILSQSSHQEGV-FY-KGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 188 ~~p~~~~~~~~~~~~v-~~-~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
.+.. ....-..+ +. +|...+.++....+..||+.+.+-
T Consensus 176 ~~~~----h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 176 TLIG----HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp EEEC----CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred EEcC----CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 0000 00111122 22 465555555555689999887654
No 212
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=32.46 E-value=2.4e+02 Score=25.36 Aligned_cols=83 Identities=8% Similarity=0.216 Sum_probs=48.6
Q ss_pred CCCeEEEEEeeecC----------CccceEEEEEEcCCC-CEEEEEecChHHHHHhhhhccCCCceEEEEe--------e
Q 017381 258 ESNKLYLIGGVGRN----------GISTTMKLWELGCGG-NWIEVERVPEMMCRKFMSVCYHNYDHVYCFW--------H 318 (372)
Q Consensus 258 ~~g~L~vv~~~~~~----------~~~~~i~vw~l~~~~-~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~--------~ 318 (372)
-.|+|+|++.-... ....++-+|.|..++ +=.+...+|......- ++ ...+ .+. .
T Consensus 96 ~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~---S~--l~di-~VD~~~~~~~c~ 169 (381)
T 3q6k_A 96 DCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKP---TY--FGGF-AVDVANPKGDCS 169 (381)
T ss_dssp TTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCG---GG--EEEE-EEEESCTTTTSC
T ss_pred CCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccC---Cc--cceE-EEecccCCCCCC
Confidence 57999999742111 112357777775442 4566667876642210 10 1112 222 1
Q ss_pred CCEEEEEeecCCeEEEEECCCC-ceEECC
Q 017381 319 QGMICVCCYTWPEILYYNVARR-TWHWLP 346 (372)
Q Consensus 319 ~~~i~~~~~~~~~v~~yd~~~~-~w~~v~ 346 (372)
++.+|+.......+++||++++ .|+.+.
T Consensus 170 ~~~aYItD~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 170 ETFVYITNFLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred ccEEEEEcCCCCcEEEEECCCCcEEEEcc
Confidence 4578888766778999999987 676654
No 213
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=32.29 E-value=1.1e+02 Score=22.13 Aligned_cols=42 Identities=5% Similarity=-0.081 Sum_probs=25.6
Q ss_pred ceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEe
Q 017381 121 SSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLF 163 (372)
Q Consensus 121 ~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~ 163 (372)
.+++.+||.++.|...... .....-.+..+...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~~-~g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGS-TGFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGC-CSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCC-CCceEEEEEEECCCCEEEEEEEE
Confidence 4788899999988654311 11112233445566789988764
No 214
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=32.25 E-value=3.1e+02 Score=25.38 Aligned_cols=111 Identities=7% Similarity=0.036 Sum_probs=53.2
Q ss_pred EEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCC-cccccceeeeccCC-CeEEEEEeeecCCccceEEEEEEcCCC
Q 017381 209 LYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPH-ELTFFRLVNDGEES-NKLYLIGGVGRNGISTTMKLWELGCGG 286 (372)
Q Consensus 209 ~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~-~~~~~~lv~e~~~~-g~L~vv~~~~~~~~~~~i~vw~l~~~~ 286 (372)
+...+.....+..||..+.+....... ... ......+... -+ |++++++.. ...+.+|.+.. +
T Consensus 175 ~l~~~~~d~~v~vwd~~~~~~~~~~~~-------~~~~~~~v~~~~~~--~~~~~~l~~~~~-----dg~i~vwd~~~-~ 239 (615)
T 1pgu_A 175 RSMTVGDDGSVVFYQGPPFKFSASDRT-------HHKQGSFVRDVEFS--PDSGEFVITVGS-----DRKISCFDGKS-G 239 (615)
T ss_dssp EEEEEETTTEEEEEETTTBEEEEEECS-------SSCTTCCEEEEEEC--STTCCEEEEEET-----TCCEEEEETTT-C
T ss_pred EEEEEeCCCcEEEEeCCCcceeeeecc-------cCCCCceEEEEEEC--CCCCCEEEEEeC-----CCeEEEEECCC-C
Confidence 444555556799999877654332111 111 0011122211 35 777666542 35789998743 2
Q ss_pred CEEEEEecChHHHHHhhhhccCCCceEEEE-eeCCEEEEEeecCCeEEEEECCCCceEE
Q 017381 287 NWIEVERVPEMMCRKFMSVCYHNYDHVYCF-WHQGMICVCCYTWPEILYYNVARRTWHW 344 (372)
Q Consensus 287 ~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~v~~yd~~~~~w~~ 344 (372)
+ .+..+.... . .....+.++ ..++..++.....+.+.+||+++++...
T Consensus 240 ~--~~~~~~~~~----~----~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~ 288 (615)
T 1pgu_A 240 E--FLKYIEDDQ----E----PVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQ 288 (615)
T ss_dssp C--EEEECCBTT----B----CCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred C--EeEEecccc----c----ccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 2 222221000 0 001112222 2144445555456789999999876543
No 215
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=31.63 E-value=44 Score=26.25 Aligned_cols=40 Identities=15% Similarity=-0.057 Sum_probs=25.1
Q ss_pred ceEEEEecccc-ceeccCCCCCCCCceeEEEEeCCCCEEEEEEe
Q 017381 121 SSFLVCNLVTL-SSRTIDFPTYPFDFELLTLVSTPSGYKIFMLF 163 (372)
Q Consensus 121 ~~~~v~NP~t~-~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~ 163 (372)
.+++++||.|+ .|........ .-.+-.+...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~~~---~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKHAV---TVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSSCE---EEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCCCe---EEEEEEcCCCCEEEEEEcc
Confidence 47889999997 8976443211 1122245556778888765
No 216
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=31.46 E-value=2.5e+02 Score=24.13 Aligned_cols=111 Identities=16% Similarity=0.075 Sum_probs=61.3
Q ss_pred EEecCcEEEEecC-CCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccc
Q 017381 106 LSSSKGLLCFSLP-SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKF 184 (372)
Q Consensus 106 ~~s~~Gll~~~~~-~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~ 184 (372)
+...+|.|+.... ....++++++.......+-.... ..-.+++++...+ ++++... ....++.++.....=+.+
T Consensus 129 vdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l-~~Pnglavd~~~~--~lY~aD~--~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 129 LDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI-YWPNGLTLDYEEQ--KLYWADA--KLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp EEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSC-SCEEEEEEETTTT--EEEEEET--TTTEEEEEETTSCSCEEE
T ss_pred EeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCC-CCccEEEEeccCC--EEEEEEC--CCCEEEEEcCCCCceEEE
Confidence 4456777777653 24678888876443333311111 1123566664333 6776643 345788888764322222
Q ss_pred ccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCe
Q 017381 185 DIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGI 228 (372)
Q Consensus 185 ~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~ 228 (372)
. . . .+. .....++.++.+||.......|..+|..+.+
T Consensus 204 ~--~--~-~~~--~P~glav~~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 204 V--K--G-SLP--HPFALTLFEDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp E--C--S-CCS--CEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred e--c--C-CCC--CceEEEEeCCEEEEEecCCCeEEEEECCCCC
Confidence 2 1 0 010 1122344578999998777789999986544
No 217
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=31.45 E-value=2.8e+02 Score=24.65 Aligned_cols=104 Identities=16% Similarity=0.250 Sum_probs=51.3
Q ss_pred CCEEEEeeeCCcEEEEEecCCCee-eccC-CCCccccccCCCcccccceeeeccCCCe-EEEEEeeecCCccceEEEEEE
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIW-ETPN-DANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWEL 282 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w-~~i~-~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~vv~~~~~~~~~~~i~vw~l 282 (372)
++.+...+.....|..||+.+..- ..+. ... ...... .+... -+|+ +++++.. ...+.+|.+
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~------~~~~v~--~i~~~--p~~~~~l~tg~~-----dg~v~vwd~ 307 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA------HTAEVN--CLSFN--PYSEFILATGSA-----DKTVALWDL 307 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC------CSSCEE--EEEEC--SSCTTEEEEEET-----TSEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeec------CCCCeE--EEEeC--CCCCCEEEEEeC-----CCeEEEEeC
Confidence 455666666666799999986531 1110 000 111111 22211 2344 6666542 357999988
Q ss_pred cCCCC-EEEEEecChHHHHHhhhhccCCCceEEEE-e--eCCEEEEEeecCCeEEEEECCC
Q 017381 283 GCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCF-W--HQGMICVCCYTWPEILYYNVAR 339 (372)
Q Consensus 283 ~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~-~--~~~~i~~~~~~~~~v~~yd~~~ 339 (372)
...+. -.....- ...+.++ . .+..+++.+...+.|.+||+.+
T Consensus 308 ~~~~~~~~~~~~h---------------~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 308 RNLKLKLHSFESH---------------KDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TCTTSCSEEEECC---------------SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCCCCeEEeecC---------------CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 64332 1111100 1122222 2 3434666665667899999987
No 218
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=30.50 E-value=4e+02 Score=26.17 Aligned_cols=234 Identities=10% Similarity=0.052 Sum_probs=110.9
Q ss_pred cccccCCCCCeeeecCC----CCCCCCCceE-EEEecCcEEEEecCCCceEEEEeccccceeccCCCCC---C---CCce
Q 017381 78 YPLYDSTHGTWRRLSLP----YSLLLPSAAT-LLSSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTY---P---FDFE 146 (372)
Q Consensus 78 ~~~~d~~~~~w~~l~~~----~~~~~~~~~~-~~~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~---~---~~~~ 146 (372)
+..||+..+.+...... ..++. ..+. +....+|-+.+... +.+.++|+.++++..+...+. . ....
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~l~~-~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 313 (795)
T 4a2l_A 237 LFLINPKTKEIKNYLHSPSNPKSISS-NYIRSLAMDSQNRLWIGTF--NDLNIYHEGTDSFASYSSNPVENGSLSQRSVR 313 (795)
T ss_dssp EEEEETTTTEEEEECCCTTCTTSCSC-SBEEEEEECTTSCEEEEES--SCEEEEETTTTEEEEECCCTTSTTSCSSSCEE
T ss_pred eEEEeCCCCeEEEeecCCCCccccCC-CeEEEEEEcCCCCEEEEeC--ChhheEcCCCCeEEEEecCCCCCCCCCCCcEE
Confidence 44567666665554322 11111 2222 22334564444432 358889999998877653321 1 1111
Q ss_pred eEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCc-cccccCCCcccEEE--CCEEEEeeeCCcEEEEEe
Q 017381 147 LLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPS-MILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFD 223 (372)
Q Consensus 147 ~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~-~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD 223 (372)
.+..+..+ .+ .++. ....+..|+..++.++... ..+. ..+.. ..-.+++. +|. .|++.....+..||
T Consensus 314 ~i~~D~~g---~l-Wigt--~~~Gl~~~~~~~~~~~~~~--~~~~~~~l~~-~~V~~i~~d~~g~-lWiGt~~~Gl~~~~ 383 (795)
T 4a2l_A 314 SIFMDSQG---GM-WLGT--YFGGLNYYHPIRNRFKNIR--NIPYKNSLSD-NVVSCIVEDKDKN-LWIGTNDGGLNLYN 383 (795)
T ss_dssp EEEECTTS---CE-EEEE--SSSCEEEECGGGGSSEEEC--CCTTSSSCSC-SSEEEEEECTTSC-EEEEESSSCEEEEC
T ss_pred EEEEeCCc---CE-EEEE--CCCCeEEeCCCcccceEEc--CCCCCCCCCC-CeeEEEEECCCCC-EEEEECCCCeEEEc
Confidence 22222221 22 2221 1135677887777766544 1111 01111 11123333 355 45665555699999
Q ss_pred cCCCeeeccCCCCccccccCCCcccccceeeeccCCCe-EEEEEeeecCCccceEEEEEEcCCC-CEEEEEecChHHHHH
Q 017381 224 LENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNK-LYLIGGVGRNGISTTMKLWELGCGG-NWIEVERVPEMMCRK 301 (372)
Q Consensus 224 ~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~-L~vv~~~~~~~~~~~i~vw~l~~~~-~W~~v~~lp~~~~~~ 301 (372)
..+.++.....+......-++.. ....+..+ .+|+ |++-.. .. .++.++..+ .+.........
T Consensus 384 ~~~~~~~~~~~~~~~~~~~l~~~-~v~~i~~d--~~g~~lWigt~------~~--Gl~~~d~~~~~~~~~~~~~~~---- 448 (795)
T 4a2l_A 384 PITQRFTSYTLQEDESARGIGSN-NIKAVYVD--EKKSLVYIGTH------AG--GLSILHRNSGQVENFNQRNSQ---- 448 (795)
T ss_dssp TTTCCEEEECCC------CCSCS-CEEEEEEE--TTTTEEEEEET------TT--EEEEEETTTCCEEEECTTTSC----
T ss_pred CCCCcEEEEecCCCCcccCCCCc-cEEEEEEc--CCCCEEEEEeC------cC--ceeEEeCCCCcEEEeecCCCC----
Confidence 99888876531100000001111 11233323 5788 776432 12 355555543 35444221000
Q ss_pred hhhhccCCCceEEEE--eeCCEEEEEeecCCeEEEEECCCCceEECCC
Q 017381 302 FMSVCYHNYDHVYCF--WHQGMICVCCYTWPEILYYNVARRTWHWLPS 347 (372)
Q Consensus 302 ~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~v~~yd~~~~~w~~v~~ 347 (372)
+ ....+.++ ..++.|++... ..+..||+++++++.+..
T Consensus 449 -l-----~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~ 488 (795)
T 4a2l_A 449 -L-----VNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIEK 488 (795)
T ss_dssp -C-----SCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECCB
T ss_pred -c-----CCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEccc
Confidence 0 01223333 23567788764 679999999999988753
No 219
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=29.66 E-value=2.3e+02 Score=23.19 Aligned_cols=101 Identities=3% Similarity=-0.108 Sum_probs=47.6
Q ss_pred CcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCC-ccccccCC
Q 017381 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQS-WSKFDIDG 188 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~-W~~~~~~~ 188 (372)
+++++... .++.+.+||..+++....-... ......+.+.+.+ +.++.++ ....+.+|+..... .+... .
T Consensus 29 ~~~l~s~~-~dg~v~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~---~~l~~~~--~dg~i~~~~~~~~~~~~~~~--~ 99 (313)
T 3odt_A 29 DSKVASVS-RDGTVRLWSKDDQWLGTVVYTG-QGFLNSVCYDSEK---ELLLFGG--KDTMINGVPLFATSGEDPLY--T 99 (313)
T ss_dssp TTEEEEEE-TTSEEEEEEESSSEEEEEEEEC-SSCEEEEEEETTT---TEEEEEE--TTSCEEEEETTCCTTSCC-C--E
T ss_pred CCEEEEEE-cCCcEEEEECCCCEEEEEeecC-CccEEEEEECCCC---CEEEEec--CCCeEEEEEeeecCCCCccc--c
Confidence 33444333 3578999998776643322111 1122344444432 2333333 23456777765431 22121 1
Q ss_pred CCccccccCCCcccEEECCEEEEeeeCCcEEEEEe
Q 017381 189 FPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFD 223 (372)
Q Consensus 189 ~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD 223 (372)
+.. .......+..+|...+.+.....+..||
T Consensus 100 ~~~----~~~~i~~~~~~~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 100 LIG----HQGNVCSLSFQDGVVISGSWDKTAKVWK 130 (313)
T ss_dssp ECC----CSSCEEEEEEETTEEEEEETTSEEEEEE
T ss_pred hhh----cccCEEEEEecCCEEEEEeCCCCEEEEc
Confidence 111 1112223444666666666666788999
No 220
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=28.97 E-value=3.9e+02 Score=25.60 Aligned_cols=194 Identities=11% Similarity=0.042 Sum_probs=101.0
Q ss_pred EecCcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCcccccc
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDI 186 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~ 186 (372)
...+|.|++.....+.+..+++.......+-.-.. ....+++++..++ .+++... ....+++.+..+..=+.+..
T Consensus 357 d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~-~~p~GlAvD~~~~--~lY~tD~--~~~~I~v~~~~G~~~~~l~~ 431 (619)
T 3s94_A 357 DPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQI-AHPDGIAVDWVAR--NLYWTDT--GTDRIEVTRLNGTMRKILIS 431 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTT--EEEEEET--TTTEEEEEETTSCSCEEEEC
T ss_pred EcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCC-CCcCceEEecccC--cEEEEeC--CCCcEEEEeCCCCeEEEEEE
Confidence 34577777776556788888887655444322111 1224677774333 6776542 34688888876543222220
Q ss_pred CCCCccccccCCCcccEEE---CCEEEEeeeC-CcEEEEEecCCCeeecc-CCCCccccccCCCcccccceeeeccCCCe
Q 017381 187 DGFPSMILSQSSHQEGVFY---KGSLYFTTPE-PFSIVRFDLENGIWETP-NDANDHMTMMLPHELTFFRLVNDGEESNK 261 (372)
Q Consensus 187 ~~~p~~~~~~~~~~~~v~~---~G~~y~~~~~-~~~i~~yD~~~~~w~~i-~~p~~~~~~~~p~~~~~~~lv~e~~~~g~ 261 (372)
. .+ ..-.++++ +|.+||.... ...|...++.-..-..+ ... ...|.+ |..+ ..+++
T Consensus 432 ----~-~l---~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~-----l~~P~G-----lalD-~~~~~ 492 (619)
T 3s94_A 432 ----E-DL---EEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTS-----LGWPNG-----LALD-YDEGK 492 (619)
T ss_dssp ----T-TC---CSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS-----CSCEEE-----EEEE-TTTTE
T ss_pred ----C-CC---CCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCC-----CCCCee-----eEEc-ccCCE
Confidence 0 11 12235555 4999998753 35688888763322221 100 002332 3322 13789
Q ss_pred EEEEEeeecCCccceEEEEEEcCCCCEEEEE-ecChHHHHHhhhhccCCCceEEEEeeCCEEEEEeecCCeEEEEECCCC
Q 017381 262 LYLIGGVGRNGISTTMKLWELGCGGNWIEVE-RVPEMMCRKFMSVCYHNYDHVYCFWHQGMICVCCYTWPEILYYNVARR 340 (372)
Q Consensus 262 L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~-~lp~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~v~~yd~~~~ 340 (372)
||++... ...|+...++....=+.+. .++ .....+..++.||+.....+.|...|..++
T Consensus 493 LY~aD~~-----~~~I~~~~~dG~~~~~~~~~~l~---------------~P~glav~~~~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 493 IYWGDAK-----TDKIEVMNTDGTGRRVLVEDKIP---------------HIFGFTLLGDYVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEEEETT-----TTEEEEEESSSCCCEEEEECCCC---------------SSCCEEEETTEEEEECTTSSCEEEEESSSC
T ss_pred EEEEECC-----CCEEEEEecCCCceEEEeccCCC---------------CcEEEEEECCEEEEeecCCCeEEEEEcCCC
Confidence 9998752 2455555554322222221 111 111122346678888766667888888776
Q ss_pred ceEE
Q 017381 341 TWHW 344 (372)
Q Consensus 341 ~w~~ 344 (372)
.-+.
T Consensus 553 ~~~~ 556 (619)
T 3s94_A 553 EREV 556 (619)
T ss_dssp CEEE
T ss_pred ceEE
Confidence 4433
No 221
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=28.72 E-value=2.3e+02 Score=22.81 Aligned_cols=185 Identities=11% Similarity=0.029 Sum_probs=88.4
Q ss_pred CCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCC-CCccccccCCCCccccccC
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTD-QSWSKFDIDGFPSMILSQS 197 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~-~~W~~~~~~~~p~~~~~~~ 197 (372)
..+.+.+||+.+++...+..... ....+.+.+.+. .++. +. ...+.+||..+ +...... .... ..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~--~v~~~~~spdg~--~l~~-~~---~~~i~~~d~~~~~~~~~~~--~~~~----~~ 85 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE--LFEAPNWSPDGK--YLLL-NS---EGLLYRLSLAGDPSPEKVD--TGFA----TI 85 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS--CCEEEEECTTSS--EEEE-EE---TTEEEEEESSSCCSCEECC--CTTC----CC
T ss_pred cceeEEEEeCCCCceeeeccCCc--ceEeeEECCCCC--EEEE-Ec---CCeEEEEeCCCCCCceEec--cccc----cc
Confidence 34689999999988766543221 122344433322 3333 32 25889999988 7665443 1110 00
Q ss_pred CCcccEEE-CCEEEEeee----CCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCC
Q 017381 198 SHQEGVFY-KGSLYFTTP----EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNG 272 (372)
Q Consensus 198 ~~~~~v~~-~G~~y~~~~----~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~ 272 (372)
......+. +|...+... ....|..+|..+.+...+. ......... + . -+|+..++....
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~---------~~~~~~~~~-~-s--pdg~~l~~~~~~--- 149 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMT---------KNLPSYWHG-W-S--PDGKSFTYCGIR--- 149 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECC---------SSSSEEEEE-E-C--TTSSEEEEEEEE---
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEee---------cCCCccceE-E-C--CCCCEEEEEECC---
Confidence 11112222 454433333 1346788887766544432 111111111 2 1 467654433322
Q ss_pred ccceEEEEEEcCCCC-EEEEEecChHHHHHhhhhccCCCceEEEEe-eCCEEEEEeec--CCeEEEEECCCCceEECCC
Q 017381 273 ISTTMKLWELGCGGN-WIEVERVPEMMCRKFMSVCYHNYDHVYCFW-HQGMICVCCYT--WPEILYYNVARRTWHWLPS 347 (372)
Q Consensus 273 ~~~~i~vw~l~~~~~-W~~v~~lp~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~--~~~v~~yd~~~~~w~~v~~ 347 (372)
...+.||.++..+. ...+...+. ......+. ++..+++.... ...+..+|+.++....+..
T Consensus 150 -~~~~~l~~~~~~~~~~~~~~~~~~-------------~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~ 214 (297)
T 2ojh_A 150 -DQVFDIYSMDIDSGVETRLTHGEG-------------RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD 214 (297)
T ss_dssp -TTEEEEEEEETTTCCEEECCCSSS-------------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC
T ss_pred -CCceEEEEEECCCCcceEcccCCC-------------ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec
Confidence 24678999875443 433322110 00111222 34455555432 2346666767777776654
No 222
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=28.20 E-value=2.6e+02 Score=23.23 Aligned_cols=58 Identities=3% Similarity=-0.114 Sum_probs=30.9
Q ss_pred CceEEEEeccccceeccCCCCCCC-CceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCc
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYPF-DFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~~-~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W 181 (372)
.+.+.++|+.+++....-..+... ....+++.+.+. .+++... ....+.+||..+++-
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~v~~~--~~~~v~~~d~~~~~~ 68 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGR--IAYATVN--KSESLVKIDLVTGET 68 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSS--EEEEEET--TTTEEEEEETTTCCE
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCC--EEEEEeC--CCCeEEEEECCCCCe
Confidence 578889999888754321111100 122344443322 3444332 335789999887753
No 223
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=28.10 E-value=3.1e+02 Score=24.16 Aligned_cols=144 Identities=8% Similarity=0.042 Sum_probs=68.7
Q ss_pred CcEEEEecCCCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCC
Q 017381 110 KGLLCFSLPSSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGF 189 (372)
Q Consensus 110 ~Gll~~~~~~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~ 189 (372)
+|-+++.+..++.+.|||..+++....-... ......+.+.+.+ ++++.++. +..+.+||..++. ... .+
T Consensus 119 ~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h-~~~V~~v~~~~~~---~~l~sgs~--D~~i~iwd~~~~~--~~~--~~ 188 (410)
T 1vyh_C 119 VFSVMVSASEDATIKVWDYETGDFERTLKGH-TDSVQDISFDHSG---KLLASCSA--DMTIKLWDFQGFE--CIR--TM 188 (410)
T ss_dssp SSSEEEEEESSSCEEEEETTTCCCCEEECCC-SSCEEEEEECTTS---SEEEEEET--TSCCCEEETTSSC--EEE--CC
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEecc-CCcEEEEEEcCCC---CEEEEEeC--CCeEEEEeCCCCc--eeE--EE
Confidence 4423333334678999999988743211110 0111234443322 34444442 3456788876542 222 11
Q ss_pred CccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEe
Q 017381 190 PSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGG 267 (372)
Q Consensus 190 p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~ 267 (372)
.. +...-..+.+ +|...+.++....|..+|+.+......... ...... .+... -+|++++.+.
T Consensus 189 ~~----h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-------h~~~v~--~~~~~--~~g~~l~s~s 253 (410)
T 1vyh_C 189 HG----HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-------HREWVR--MVRPN--QDGTLIASCS 253 (410)
T ss_dssp CC----CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-------CSSCEE--EEEEC--TTSSEEEEEE
T ss_pred cC----CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC-------CCccEE--EEEEC--CCCCEEEEEc
Confidence 11 0011122333 455555666667899999987654321100 111111 11111 4677766655
Q ss_pred eecCCccceEEEEEEc
Q 017381 268 VGRNGISTTMKLWELG 283 (372)
Q Consensus 268 ~~~~~~~~~i~vw~l~ 283 (372)
. ...+.+|.+.
T Consensus 254 ~-----D~~v~vwd~~ 264 (410)
T 1vyh_C 254 N-----DQTVRVWVVA 264 (410)
T ss_dssp T-----TSCEEEEETT
T ss_pred C-----CCeEEEEECC
Confidence 2 3578899774
No 224
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=27.78 E-value=3.2e+02 Score=24.16 Aligned_cols=33 Identities=12% Similarity=0.300 Sum_probs=23.3
Q ss_pred eEEEEEeeecCCccceEEEEEEcCCCC-EEEEEecCh
Q 017381 261 KLYLIGGVGRNGISTTMKLWELGCGGN-WIEVERVPE 296 (372)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~~~~-W~~v~~lp~ 296 (372)
+|+++.+. .....+++|+++.++. .+.+.++..
T Consensus 128 ~L~Vvnh~---~~~s~ielf~~d~~~~~~~~~~~~~g 161 (355)
T 3sre_A 128 YLLVVNHP---GSSSTVEVFKFQEEEKSLLHLKTIRH 161 (355)
T ss_dssp EEEEEECS---TTCCEEEEEEEETTTTEEEEEEEECC
T ss_pred EEEEEECC---CCCCeEEEEEEECCCCEEEEEecccc
Confidence 58888763 2346899999998765 776666643
No 225
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=27.62 E-value=3.4e+02 Score=24.37 Aligned_cols=102 Identities=13% Similarity=0.133 Sum_probs=51.7
Q ss_pred CceEEEEeccccceeccCCCC-C----------CCCceeEEEEeCCCCEEEEEEeec--C-----CCceEEEEECCCCCc
Q 017381 120 SSSFLVCNLVTLSSRTIDFPT-Y----------PFDFELLTLVSTPSGYKIFMLFAK--S-----FPNYAFVYDSTDQSW 181 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~-~----------~~~~~~~~~~~~~~~ykvv~~~~~--~-----~~~~~~vy~s~~~~W 181 (372)
.+.+++.|..++.-..+.+.. . +-....++++..+ -++++..+. + ...++.++|.++++-
T Consensus 246 ~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~--~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv 323 (386)
T 3sjl_D 246 TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL--DRIYLLVDQRDEWRHKTASRFVVVLDAKTGER 323 (386)
T ss_dssp TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT--TEEEEEEEECCTTCTTSCEEEEEEEETTTCCE
T ss_pred CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC--CeEEEEeccccccccCCCCCEEEEEECCCCeE
Confidence 357788887665533333221 0 0111235554332 366665431 1 124899999988654
Q ss_pred cccccCCCCccccccCCCcccEEECCE--EEEeeeCCcEEEEEecCCCeee
Q 017381 182 SKFDIDGFPSMILSQSSHQEGVFYKGS--LYFTTPEPFSIVRFDLENGIWE 230 (372)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~v~~~G~--~y~~~~~~~~i~~yD~~~~~w~ 230 (372)
... ++- ......-.+.-+|+ +|..+.....+.+||..+.+-.
T Consensus 324 ~~~----i~v---g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 324 LAK----FEM---GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEE----EEE---EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred EEE----EEC---CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEE
Confidence 221 111 11011112223664 5655655667999999887653
No 226
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=27.52 E-value=2.8e+02 Score=23.36 Aligned_cols=139 Identities=6% Similarity=0.109 Sum_probs=67.9
Q ss_pred ceEEEEeccccce-eccCCCC---CCCCceeEEEEeCCCC-EEEEEEeecCCCceEEEEECCCCCccccccCCCCccccc
Q 017381 121 SSFLVCNLVTLSS-RTIDFPT---YPFDFELLTLVSTPSG-YKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILS 195 (372)
Q Consensus 121 ~~~~v~NP~t~~~-~~lP~~~---~~~~~~~~~~~~~~~~-ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~ 195 (372)
+.+.+||..+++. ..+.... .......+++.+.... .++++.++ ....+.+||..++.= .. .+..
T Consensus 44 ~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~--~dg~i~v~d~~~~~~--~~--~~~~---- 113 (366)
T 3k26_A 44 NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG--SRGIIRIINPITMQC--IK--HYVG---- 113 (366)
T ss_dssp TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE--TTCEEEEECTTTCCE--EE--EEES----
T ss_pred CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec--CCCEEEEEEchhceE--ee--eecC----
Confidence 5788889887664 2332221 1122334555544321 34555554 235788998876532 11 0110
Q ss_pred cCCCcccEEE---CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCC-CcccccceeeeccCCCeEEEEEeeecC
Q 017381 196 QSSHQEGVFY---KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLP-HELTFFRLVNDGEESNKLYLIGGVGRN 271 (372)
Q Consensus 196 ~~~~~~~v~~---~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p-~~~~~~~lv~e~~~~g~L~vv~~~~~~ 271 (372)
....-..+.+ +|.+.+.+.....|..||+.+.+....... +. .......+... -+|++++++..
T Consensus 114 ~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~~~v~~~~~~--~~~~~l~~~~~--- 181 (366)
T 3k26_A 114 HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGG-------VEGHRDEVLSADYD--LLGEKIMSCGM--- 181 (366)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECS-------TTSCSSCEEEEEEC--TTSSEEEEEET---
T ss_pred CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecc-------cccccCceeEEEEC--CCCCEEEEecC---
Confidence 0011122333 456666666556799999987654432100 01 11111122211 35666666542
Q ss_pred CccceEEEEEEc
Q 017381 272 GISTTMKLWELG 283 (372)
Q Consensus 272 ~~~~~i~vw~l~ 283 (372)
...+.+|.+.
T Consensus 182 --dg~i~i~d~~ 191 (366)
T 3k26_A 182 --DHSLKLWRIN 191 (366)
T ss_dssp --TSCEEEEESC
T ss_pred --CCCEEEEECC
Confidence 3578999875
No 227
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=27.10 E-value=3.2e+02 Score=23.89 Aligned_cols=105 Identities=16% Similarity=0.148 Sum_probs=54.5
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCC
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (372)
+|.....++....|..+|+.+.+....... ..... ..+... -+|+.++.+. ....+.+|.+..
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-------h~~~v--~~~~~~--p~~~~l~s~s-----~d~~v~iwd~~~- 196 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQG-------HEQDI--YSLDYF--PSGDKLVSGS-----GDRTVRIWDLRT- 196 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECC-------CSSCE--EEEEEC--TTSSEEEEEE-----TTSEEEEEETTT-
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEcc-------CCCCE--EEEEEc--CCCCEEEEec-----CCCcEEEEECCC-
Confidence 566666666666799999987765432111 11111 122111 3666655544 135789997743
Q ss_pred CCEEEEEecChHHHHHhhhhccCCCceEE--EEe-eCCEEEEEeecCCeEEEEECCCCce
Q 017381 286 GNWIEVERVPEMMCRKFMSVCYHNYDHVY--CFW-HQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 286 ~~W~~v~~lp~~~~~~~~~~~~~~~~~~~--~~~-~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
+.-....... ..+. ++. .++..++.+...+.|.+||+++++.
T Consensus 197 ~~~~~~~~~~---------------~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 197 GQCSLTLSIE---------------DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp TEEEEEEECS---------------SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred CeeEEEEEcC---------------CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 2222111111 1122 222 2444555555567899999988754
No 228
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=26.14 E-value=3.5e+02 Score=24.03 Aligned_cols=192 Identities=13% Similarity=0.148 Sum_probs=89.4
Q ss_pred CceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCC--CceEEEE--ECCCCCccccccCCC--Cc-c
Q 017381 120 SSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSF--PNYAFVY--DSTDQSWSKFDIDGF--PS-M 192 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~--~~~~~vy--~s~~~~W~~~~~~~~--p~-~ 192 (372)
...++|||..-++...+|......-...-++.-.+...-++++.. .. ...+.+| |+.++.++.+. .. |. .
T Consensus 49 ~~gL~Vydl~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~-R~~~~n~l~vf~iDp~~~~l~~i~--~~~~pv~t 125 (355)
T 3amr_A 49 KSGLVVYSLDGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASN-RSEGKNTIEIYAIDGKNGTLQSMT--DPDHPIAT 125 (355)
T ss_dssp TTEEEEEETTSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEE-CSTTCCEEEEEEECTTTCCEEECS--CTTSCEEC
T ss_pred CCCEEEEcCCCcEEEEccCCCcccEEEecccccCCceEeEEEEeC-CCCCCCeEEEEEECCCCCceeecc--ccccCcCC
Confidence 357888888444455555321100000001111111111333332 23 5678888 66888888875 32 31 0
Q ss_pred ccccCCCcccEEE-----CCEEEEeee-CCcEEEEEecC---CCeee--ccC-CCCccccccCCCcccccceeeeccCCC
Q 017381 193 ILSQSSHQEGVFY-----KGSLYFTTP-EPFSIVRFDLE---NGIWE--TPN-DANDHMTMMLPHELTFFRLVNDGEESN 260 (372)
Q Consensus 193 ~~~~~~~~~~v~~-----~G~~y~~~~-~~~~i~~yD~~---~~~w~--~i~-~p~~~~~~~~p~~~~~~~lv~e~~~~g 260 (372)
.+ ..-.++.+ .|++|.+.. +...+..|++. +.+.+ .+. .+ ++...+ ...+.+ -.|
T Consensus 126 ~~---~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-------lgsq~E-gcvvDd--~~g 192 (355)
T 3amr_A 126 AI---NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-------MNSQTE-GMAADD--EYG 192 (355)
T ss_dssp CC---SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-------CSSCEE-EEEEET--TTT
T ss_pred CC---CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-------CCCCcc-eEEEcC--CCC
Confidence 11 12223433 366666543 33456666653 22221 111 01 333222 122322 468
Q ss_pred eEEEEEeeecCCccceEEEEEEcC--CC--CEEEEEecChHHHHHhhhhccCCCceEEEE-ee-C-CEEEEEeecCCeEE
Q 017381 261 KLYLIGGVGRNGISTTMKLWELGC--GG--NWIEVERVPEMMCRKFMSVCYHNYDHVYCF-WH-Q-GMICVCCYTWPEIL 333 (372)
Q Consensus 261 ~L~vv~~~~~~~~~~~i~vw~l~~--~~--~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~-~~-~-~~i~~~~~~~~~v~ 333 (372)
+||+-.. ...||+++. .+ +-+.+..++...+. ...+.+... .. + +.+++.+...+...
T Consensus 193 ~Lyv~eE--------d~GIw~~da~p~~~~~~~~v~~~~~g~l~-------aDvEGLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 193 RLYIAEE--------DEAIWKFSAEPDGGSNGTVIDRADGRHLT-------RDIEGLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp EEEEEET--------TTEEEEEECSTTSCSCCEEEEEBSSSSBC-------SCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred eEEEecc--------cceEEEEeCCcCCCCCceEEEEecCCccc-------cCcceEEEEecCCCCEEEEEEcCCCCEEE
Confidence 8888642 246899983 33 26666665422110 011222222 11 1 36777776667899
Q ss_pred EEECC-CCce
Q 017381 334 YYNVA-RRTW 342 (372)
Q Consensus 334 ~yd~~-~~~w 342 (372)
+||.+ +++.
T Consensus 258 Vydr~~~~~~ 267 (355)
T 3amr_A 258 IYDRQGKNKY 267 (355)
T ss_dssp EEESSTTCCE
T ss_pred EEECCCCCcE
Confidence 99997 4443
No 229
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=26.02 E-value=4.2e+02 Score=24.94 Aligned_cols=112 Identities=13% Similarity=0.035 Sum_probs=53.6
Q ss_pred ecCcEEEEecCCCceEEEEeccccceec-cCCC--CC-CCC--ceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCc
Q 017381 108 SSKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFP--TY-PFD--FELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSW 181 (372)
Q Consensus 108 s~~Gll~~~~~~~~~~~v~NP~t~~~~~-lP~~--~~-~~~--~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W 181 (372)
+-+|-+++.+..++.+.+||..+++... +... .. ... ...+++.+. . +.++.++ .+..+.+||..++..
T Consensus 199 spdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd--g-~~l~s~s--~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 199 NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD--G-TKIASAS--ADKTIKIWNVATLKV 273 (611)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT--S-SEEEEEE--TTSEEEEEETTTTEE
T ss_pred CCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC--C-CEEEEEe--CCCeEEEEeCCCCce
Confidence 3455333333346789999998877532 2111 00 111 123344332 2 2333333 346788999987765
Q ss_pred cccccCCCCccccccCCCcccEEECCEEEEeeeCCcEEEEEecCCCee
Q 017381 182 SKFDIDGFPSMILSQSSHQEGVFYKGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 182 ~~~~~~~~p~~~~~~~~~~~~v~~~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
...- .... .. ......+..+|.....+.....+..+|+.+.+.
T Consensus 274 ~~~~--~~~~-~~--~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~ 316 (611)
T 1nr0_A 274 EKTI--PVGT-RI--EDQQLGIIWTKQALVSISANGFINFVNPELGSI 316 (611)
T ss_dssp EEEE--ECCS-SG--GGCEEEEEECSSCEEEEETTCCEEEEETTTTEE
T ss_pred eeee--cCCC-Cc--cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCc
Confidence 3221 1110 00 011123334555544444445678888876653
No 230
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=25.43 E-value=3.2e+02 Score=23.44 Aligned_cols=137 Identities=11% Similarity=0.085 Sum_probs=66.5
Q ss_pred CceEEEEECCCCCccccccCCCCccccccCCCcccEEE----CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccC
Q 017381 168 PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY----KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMML 243 (372)
Q Consensus 168 ~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~----~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~ 243 (372)
...+.+||.++++-...- .. +......+.+ +|...+.++....+..+|+.+.+....... .
T Consensus 175 D~~v~lwd~~~~~~~~~~----~~----h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-------h 239 (354)
T 2pbi_B 175 DGTCALWDVESGQLLQSF----HG----HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET-------H 239 (354)
T ss_dssp TSEEEEEETTTCCEEEEE----EC----CSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC-------C
T ss_pred CCcEEEEeCCCCeEEEEE----cC----CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-------C
Confidence 467889998876532111 00 0001111222 355555566556799999987654332101 1
Q ss_pred CCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCCCCEEEEEecChHHHHHhhhhccCCCceEE--EEeeCCE
Q 017381 244 PHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCGGNWIEVERVPEMMCRKFMSVCYHNYDHVY--CFWHQGM 321 (372)
Q Consensus 244 p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~--~~~~~~~ 321 (372)
..... .+... -+|.+++.+.. ...+.+|.+..... +..+.... ....+. .+..++.
T Consensus 240 ~~~v~--~v~~~--p~~~~l~s~s~-----D~~v~lwd~~~~~~---~~~~~~~~----------~~~~~~~~~~s~~g~ 297 (354)
T 2pbi_B 240 ESDVN--SVRYY--PSGDAFASGSD-----DATCRLYDLRADRE---VAIYSKES----------IIFGASSVDFSLSGR 297 (354)
T ss_dssp SSCEE--EEEEC--TTSSEEEEEET-----TSCEEEEETTTTEE---EEEECCTT----------CCSCEEEEEECTTSS
T ss_pred CCCeE--EEEEe--CCCCEEEEEeC-----CCeEEEEECCCCcE---EEEEcCCC----------cccceeEEEEeCCCC
Confidence 11111 22211 36776666542 35789998753221 11111000 001122 2233455
Q ss_pred EEEEeecCCeEEEEECCCCc
Q 017381 322 ICVCCYTWPEILYYNVARRT 341 (372)
Q Consensus 322 i~~~~~~~~~v~~yd~~~~~ 341 (372)
+++.+...+.|.+||+.+++
T Consensus 298 ~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 298 LLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp EEEEEETTSCEEEEETTTCS
T ss_pred EEEEEECCCcEEEEECCCCc
Confidence 55556566789999998765
No 231
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=24.79 E-value=3.3e+02 Score=23.35 Aligned_cols=117 Identities=11% Similarity=0.067 Sum_probs=55.6
Q ss_pred EecCcEEEEecCCCceEEEEeccccceec-cCCCC-C---CCCceeEEEEeCCCCEEEEEEeecC-CCceEEEEECCCCC
Q 017381 107 SSSKGLLCFSLPSSSSFLVCNLVTLSSRT-IDFPT-Y---PFDFELLTLVSTPSGYKIFMLFAKS-FPNYAFVYDSTDQS 180 (372)
Q Consensus 107 ~s~~Gll~~~~~~~~~~~v~NP~t~~~~~-lP~~~-~---~~~~~~~~~~~~~~~ykvv~~~~~~-~~~~~~vy~s~~~~ 180 (372)
-+.+| +++.+..++.+.+||..+++... +.... . ......+.+.+.+ +.++.++.. ....+.+||..++.
T Consensus 194 ~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~---~~l~~~~~d~~~g~i~i~d~~~~~ 269 (397)
T 1sq9_A 194 ISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQG---SLLAIAHDSNSFGCITLYETEFGE 269 (397)
T ss_dssp ECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSST---TEEEEEEEETTEEEEEEEETTTCC
T ss_pred ECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCC---CEEEEEecCCCCceEEEEECCCCc
Confidence 34566 55555556889999998776432 22100 0 1122234443322 233333321 11578899987653
Q ss_pred ccccccCCCCc---c----ccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCee
Q 017381 181 WSKFDIDGFPS---M----ILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIW 229 (372)
Q Consensus 181 W~~~~~~~~p~---~----~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w 229 (372)
=...- ..+. . .......-..+.+ +|...+.+.....|..||+.+.+-
T Consensus 270 ~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 270 RIGSL--SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp EEEEE--CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred cccee--ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 21111 0000 0 0000111122333 466665666666799999987644
No 232
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=24.74 E-value=4.1e+02 Score=24.45 Aligned_cols=94 Identities=10% Similarity=0.034 Sum_probs=49.8
Q ss_pred CceEEEEeccccceec--cCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccC
Q 017381 120 SSSFLVCNLVTLSSRT--IDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQS 197 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~--lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~ 197 (372)
++.+.+||..+++... +... ......+++.+.+ +.++.++ ....+.+|+..++.= .. .+.. ...
T Consensus 466 d~~i~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~g---~~l~~~~--~dg~i~iw~~~~~~~--~~--~~~~---~h~ 531 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSFDLKTPL--RAKPSYISISPSE---TYIAAGD--VMGKILLYDLQSREV--KT--SRWA---FRT 531 (615)
T ss_dssp TSCEEEEETTEEEEEEECSSCC--SSCEEEEEECTTS---SEEEEEE--TTSCEEEEETTTTEE--EE--CCSC---CCS
T ss_pred CCeEEEEECCCccccccccCCc--cCceEEEEECCCC---CEEEEcC--CCCeEEEeeCCCCcc--ee--Eeec---CCC
Confidence 5789999999887642 2211 1112234443322 3444443 235788999876532 21 1110 000
Q ss_pred CCcccEEE------------CCEEEEeeeCCcEEEEEecCCC
Q 017381 198 SHQEGVFY------------KGSLYFTTPEPFSIVRFDLENG 227 (372)
Q Consensus 198 ~~~~~v~~------------~G~~y~~~~~~~~i~~yD~~~~ 227 (372)
..-..+.+ +|.+...+.....|..||+.+.
T Consensus 532 ~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 573 (615)
T 1pgu_A 532 SKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRP 573 (615)
T ss_dssp SCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCT
T ss_pred CceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCC
Confidence 11123333 6777766766667999999874
No 233
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=24.54 E-value=3.6e+02 Score=23.67 Aligned_cols=108 Identities=11% Similarity=0.125 Sum_probs=54.8
Q ss_pred CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCC-CcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcC
Q 017381 206 KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLP-HELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGC 284 (372)
Q Consensus 206 ~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p-~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~ 284 (372)
+|.+.+.+.....|..||+.+.+-.... . .+ .......+... -+|++++++.. ...+.+|.+..
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~-~-------~~~h~~~v~~~~~s--~~~~~l~s~~~-----dg~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQII-E-------NSPRHGAVSSICID--EECCVLILGTT-----RGIIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEE-E-------CCGGGCCEEEEEEC--TTSCEEEEEET-----TSCEEEEETTT
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEE-c-------cCCCCCceEEEEEC--CCCCEEEEEcC-----CCeEEEEEcCC
Confidence 3666666666678999999876543211 1 11 11111122211 46777776652 35789998753
Q ss_pred CCCEEEEEecChHHHHHhhhhccCCCceEEEE----e--eCCEEEEEeecCCeEEEEECCCCce
Q 017381 285 GGNWIEVERVPEMMCRKFMSVCYHNYDHVYCF----W--HQGMICVCCYTWPEILYYNVARRTW 342 (372)
Q Consensus 285 ~~~W~~v~~lp~~~~~~~~~~~~~~~~~~~~~----~--~~~~i~~~~~~~~~v~~yd~~~~~w 342 (372)
+.-...-.++. ...+.++ . .++..++.+...+.|.+||+++++-
T Consensus 246 -~~~~~~~~~~~-------------~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 246 -NVLIRSWSFGD-------------HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp -TEEEEEEBCTT-------------CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred -ccEEEEEecCC-------------CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 22221111110 1122222 1 2344455454455799999998764
No 234
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=24.10 E-value=3.5e+02 Score=23.39 Aligned_cols=152 Identities=10% Similarity=0.013 Sum_probs=67.6
Q ss_pred CceEEEEeccccceeccCCCC-CCCCceeEEEEeCCCCEEEEEEeecCC--CceEEEEECCCCCccccccCCCCcccccc
Q 017381 120 SSSFLVCNLVTLSSRTIDFPT-YPFDFELLTLVSTPSGYKIFMLFAKSF--PNYAFVYDSTDQSWSKFDIDGFPSMILSQ 196 (372)
Q Consensus 120 ~~~~~v~NP~t~~~~~lP~~~-~~~~~~~~~~~~~~~~ykvv~~~~~~~--~~~~~vy~s~~~~W~~~~~~~~p~~~~~~ 196 (372)
.+.+.+++..+++........ .......+++.+.+ +.++.+.... ...+..++.............+.. .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg---~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~----~ 268 (365)
T 4h5i_A 196 GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADD---TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN----R 268 (365)
T ss_dssp SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETT---EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES----S
T ss_pred ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCC---CEEEEEecCCcceeEEeecccccceecceeeeeecC----C
Confidence 356777887777654322111 11112234454432 2333333222 235666776665543332000000 0
Q ss_pred CCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeeec-cCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCc
Q 017381 197 SSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWET-PNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGI 273 (372)
Q Consensus 197 ~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~-i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~ 273 (372)
...-..+.+ +|.+...+.....|..||..+.+-.. +. .+ ..... ..+.-. -+|++++.+. .
T Consensus 269 ~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~-~g------H~~~V--~~v~fS--pdg~~laS~S-----~ 332 (365)
T 4h5i_A 269 FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK-QA------HSFAI--TEVTIS--PDSTYVASVS-----A 332 (365)
T ss_dssp CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET-TS------SSSCE--EEEEEC--TTSCEEEEEE-----T
T ss_pred CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec-Cc------ccCCE--EEEEEC--CCCCEEEEEe-----C
Confidence 011112222 67777777766779999998765432 21 10 11111 122211 4788776654 2
Q ss_pred cceEEEEEEcCC----CC-EEEEEec
Q 017381 274 STTMKLWELGCG----GN-WIEVERV 294 (372)
Q Consensus 274 ~~~i~vw~l~~~----~~-W~~v~~l 294 (372)
..++.||.+... .+ |.++.++
T Consensus 333 D~tvrvw~ip~~~~~~~s~~~~l~kl 358 (365)
T 4h5i_A 333 ANTIHIIKLPLNYANYTSMKQKISKL 358 (365)
T ss_dssp TSEEEEEECCTTTTC-----------
T ss_pred CCeEEEEEcCCCCcCccCccccceee
Confidence 368999998532 12 6666555
No 235
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=23.45 E-value=3.5e+02 Score=23.18 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=67.1
Q ss_pred CCceEEEEeccccceeccCCCCCCCCceeEEEEeCCCCEEEEEEeecCCCceEEEEECCCCCccccccCCCCccccccCC
Q 017381 119 SSSSFLVCNLVTLSSRTIDFPTYPFDFELLTLVSTPSGYKIFMLFAKSFPNYAFVYDSTDQSWSKFDIDGFPSMILSQSS 198 (372)
Q Consensus 119 ~~~~~~v~NP~t~~~~~lP~~~~~~~~~~~~~~~~~~~ykvv~~~~~~~~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~ 198 (372)
.++.+.+||..+++....-... ......+.+.+.... +.++.++ ....+.+||..++.-...- .. ...
T Consensus 174 ~D~~v~lwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~g-~~l~sgs--~Dg~v~~wd~~~~~~~~~~----~~----h~~ 241 (354)
T 2pbi_B 174 GDGTCALWDVESGQLLQSFHGH-GADVLCLDLAPSETG-NTFVSGG--CDKKAMVWDMRSGQCVQAF----ET----HES 241 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEECC-SSCEEEEEECCCSSC-CEEEEEE--TTSCEEEEETTTCCEEEEE----CC----CSS
T ss_pred CCCcEEEEeCCCCeEEEEEcCC-CCCeEEEEEEeCCCC-CEEEEEe--CCCeEEEEECCCCcEEEEe----cC----CCC
Confidence 3578999999888743211100 011112233222222 2344443 2357889998877542211 00 001
Q ss_pred CcccEEE--CCEEEEeeeCCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccce
Q 017381 199 HQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTT 276 (372)
Q Consensus 199 ~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~ 276 (372)
.-..+.+ +|.....++....+..||+.+.+-..+... .........+... .+|++.+++.. ...
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-------~~~~~~~~~~~~s--~~g~~l~~g~~-----d~~ 307 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSK-------ESIIFGASSVDFS--LSGRLLFAGYN-----DYT 307 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-------TTCCSCEEEEEEC--TTSSEEEEEET-----TSC
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-------CCcccceeEEEEe--CCCCEEEEEEC-----CCc
Confidence 1123333 466666666666799999987643322101 0000111112112 47887777651 357
Q ss_pred EEEEEEc
Q 017381 277 MKLWELG 283 (372)
Q Consensus 277 i~vw~l~ 283 (372)
+.+|.+.
T Consensus 308 i~vwd~~ 314 (354)
T 2pbi_B 308 INVWDVL 314 (354)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 8999874
No 236
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.80 E-value=61 Score=21.44 Aligned_cols=20 Identities=15% Similarity=-0.107 Sum_probs=14.6
Q ss_pred CceEEEEeccccc--eeccCCC
Q 017381 120 SSSFLVCNLVTLS--SRTIDFP 139 (372)
Q Consensus 120 ~~~~~v~NP~t~~--~~~lP~~ 139 (372)
+++.+.|||.|++ |..-..+
T Consensus 29 dGR~fyyN~~Tk~S~WekP~eL 50 (73)
T 2dk7_A 29 DERVFFYNPTTRLSMWDRPDDL 50 (73)
T ss_dssp SSCEEEEETTTTEECSSCCTTT
T ss_pred CCCEEEecCcccceeccCChHh
Confidence 5788999999999 5443333
No 237
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=20.31 E-value=4e+02 Score=22.70 Aligned_cols=55 Identities=9% Similarity=-0.013 Sum_probs=28.5
Q ss_pred CCcEEEEEecCCCeeeccCCCCccccccCCCcccccceeeeccCCCeEEEEEeeecCCccceEEEEEEcCC
Q 017381 215 EPFSIVRFDLENGIWETPNDANDHMTMMLPHELTFFRLVNDGEESNKLYLIGGVGRNGISTTMKLWELGCG 285 (372)
Q Consensus 215 ~~~~i~~yD~~~~~w~~i~~p~~~~~~~~p~~~~~~~lv~e~~~~g~L~vv~~~~~~~~~~~i~vw~l~~~ 285 (372)
....+..||..+.+....... ......... + . -+|++++.+.. ...+.+|.++..
T Consensus 312 ~~~~i~v~d~~~~~~~~~~~~-------~~~~v~~~~-~-s--~~~~~l~s~~~-----dg~i~iw~~~~~ 366 (408)
T 4a11_B 312 YGSTIAVYTVYSGEQITMLKG-------HYKTVDCCV-F-Q--SNFQELYSGSR-----DCNILAWVPSLY 366 (408)
T ss_dssp ETTEEEEEETTTCCEEEEECC-------CSSCEEEEE-E-E--TTTTEEEEEET-----TSCEEEEEECC-
T ss_pred cCCEEEEEECcCCcceeeecc-------CCCeEEEEE-E-c--CCCCEEEEECC-----CCeEEEEeCCCC
Confidence 334688999876544322101 111111112 2 2 46777666542 357999998643
No 238
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=20.21 E-value=4.4e+02 Score=23.06 Aligned_cols=57 Identities=5% Similarity=0.002 Sum_probs=31.2
Q ss_pred CceEEEEECCCCCccccccCCCCccccccCCCcccEEE--CCEEEEeeeCCcEEEEEecCCCeee
Q 017381 168 PNYAFVYDSTDQSWSKFDIDGFPSMILSQSSHQEGVFY--KGSLYFTTPEPFSIVRFDLENGIWE 230 (372)
Q Consensus 168 ~~~~~vy~s~~~~W~~~~~~~~p~~~~~~~~~~~~v~~--~G~~y~~~~~~~~i~~yD~~~~~w~ 230 (372)
...+.+||..++.-...- ..+. ....-..+.+ +|...+.+.....|..||+.+.+..
T Consensus 191 d~~i~iwd~~~~~~~~~~--~~~~----h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQII--ENSP----RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp TSEEEEEETTTCCEEEEE--ECCG----GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CCeEEEEeCCCCeeeEEE--ccCC----CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEE
Confidence 467889998875431111 0010 0011223333 5666666666667999999876553
Done!