Query 017382
Match_columns 372
No_of_seqs 144 out of 2006
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 08:05:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017382.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017382hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0318 CaiC Acyl-CoA syntheta 100.0 5.4E-49 1.2E-53 383.2 32.8 337 1-372 11-363 (534)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 3.8E-49 8.3E-54 372.0 27.7 329 7-372 15-358 (528)
3 COG1022 FAA1 Long-chain acyl-C 100.0 6.1E-48 1.3E-52 368.6 33.3 340 2-371 17-420 (613)
4 PTZ00342 acyl-CoA synthetase; 100.0 4.3E-48 9.4E-53 386.0 33.7 343 2-370 62-529 (746)
5 PLN02736 long-chain acyl-CoA s 100.0 2.1E-47 4.6E-52 381.3 33.7 341 2-371 45-444 (651)
6 KOG1177 Long chain fatty acid 100.0 8.4E-48 1.8E-52 343.1 26.9 336 2-372 51-423 (596)
7 KOG1176 Acyl-CoA synthetase [L 100.0 4.7E-47 1E-51 359.7 30.7 332 8-372 23-370 (537)
8 PRK07788 acyl-CoA synthetase; 100.0 4.5E-47 9.8E-52 372.5 31.2 336 2-372 50-393 (549)
9 PLN02614 long-chain acyl-CoA s 100.0 9.7E-47 2.1E-51 376.1 31.9 339 2-370 46-454 (666)
10 PLN02861 long-chain-fatty-acid 100.0 2.2E-46 4.9E-51 373.6 31.6 339 2-370 44-451 (660)
11 PF00501 AMP-binding: AMP-bind 100.0 5.2E-47 1.1E-51 359.7 25.5 333 7-372 1-349 (417)
12 PRK08180 feruloyl-CoA synthase 100.0 6.9E-46 1.5E-50 368.1 33.6 338 2-371 40-408 (614)
13 PRK08314 long-chain-fatty-acid 100.0 5.3E-46 1.2E-50 364.8 32.4 337 1-371 10-373 (546)
14 PLN02860 o-succinylbenzoate-Co 100.0 8.7E-46 1.9E-50 364.2 33.9 337 2-372 8-381 (563)
15 PRK06334 long chain fatty acid 100.0 5.3E-46 1.2E-50 363.5 31.9 333 2-372 20-370 (539)
16 PLN02654 acetate-CoA ligase 100.0 1.3E-45 2.9E-50 368.4 33.2 336 4-372 91-471 (666)
17 PLN02387 long-chain-fatty-acid 100.0 2.1E-45 4.6E-50 368.2 32.8 341 2-370 59-487 (696)
18 TIGR02316 propion_prpE propion 100.0 3.5E-45 7.5E-50 364.0 33.9 335 4-371 55-426 (628)
19 PRK13382 acyl-CoA synthetase; 100.0 2.8E-45 6.1E-50 358.6 32.2 336 2-372 44-382 (537)
20 PRK07529 AMP-binding domain pr 100.0 3.8E-45 8.3E-50 363.6 32.8 332 2-370 26-401 (632)
21 PTZ00216 acyl-CoA synthetase; 100.0 4.6E-45 9.9E-50 366.5 32.9 345 2-371 70-495 (700)
22 PRK13295 cyclohexanecarboxylat 100.0 8.5E-45 1.8E-49 356.2 33.5 335 2-372 25-383 (547)
23 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 8.3E-45 1.8E-49 361.5 33.4 336 4-372 60-432 (625)
24 PRK06839 acyl-CoA synthetase; 100.0 1.1E-44 2.5E-49 351.2 33.1 329 2-372 3-334 (496)
25 PRK12582 acyl-CoA synthetase; 100.0 1.1E-44 2.4E-49 360.1 33.1 340 2-370 50-419 (624)
26 PRK07656 long-chain-fatty-acid 100.0 1.4E-44 3.1E-49 351.9 32.3 337 1-372 5-354 (513)
27 PRK08043 bifunctional acyl-[ac 100.0 2.7E-45 5.9E-50 369.8 27.9 334 1-372 204-548 (718)
28 PTZ00237 acetyl-CoA synthetase 100.0 1.3E-44 2.8E-49 360.1 30.2 338 4-372 62-450 (647)
29 PLN02246 4-coumarate--CoA liga 100.0 4.6E-44 1E-48 350.3 32.8 336 1-371 23-372 (537)
30 PRK04319 acetyl-CoA synthetase 100.0 2.7E-44 5.8E-49 354.2 30.9 334 4-372 46-393 (570)
31 PRK00174 acetyl-CoA synthetase 100.0 6.1E-44 1.3E-48 355.9 33.3 336 4-372 70-441 (637)
32 PRK07514 malonyl-CoA synthase; 100.0 1.1E-43 2.4E-48 345.0 34.0 332 2-371 4-337 (504)
33 PLN03052 acetate--CoA ligase; 100.0 4.9E-44 1.1E-48 358.6 31.4 330 7-372 181-542 (728)
34 PRK06187 long-chain-fatty-acid 100.0 1.4E-43 3E-48 345.6 32.6 336 1-372 6-356 (521)
35 PRK05677 long-chain-fatty-acid 100.0 1.7E-43 3.7E-48 348.0 33.4 337 2-372 25-395 (562)
36 PRK05605 long-chain-fatty-acid 100.0 1.2E-43 2.7E-48 349.9 32.5 337 1-372 32-406 (573)
37 KOG1256 Long-chain acyl-CoA sy 100.0 5.9E-44 1.3E-48 337.0 28.1 342 1-371 75-487 (691)
38 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2.7E-43 5.8E-48 343.2 33.0 334 2-372 1-345 (515)
39 PRK10524 prpE propionyl-CoA sy 100.0 3.3E-43 7.2E-48 350.3 33.7 335 4-371 56-427 (629)
40 PRK03640 O-succinylbenzoic aci 100.0 3.3E-43 7.1E-48 340.0 32.5 320 1-371 2-323 (483)
41 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 6.7E-43 1.4E-47 342.1 34.4 335 2-372 23-381 (538)
42 PRK08316 acyl-CoA synthetase; 100.0 4.9E-43 1.1E-47 342.0 33.0 336 2-372 12-358 (523)
43 PRK07638 acyl-CoA synthetase; 100.0 3.8E-43 8.3E-48 339.8 31.9 322 1-372 1-324 (487)
44 PLN02430 long-chain-fatty-acid 100.0 3.5E-43 7.7E-48 350.2 32.4 340 2-370 43-451 (660)
45 PRK09274 peptide synthase; Pro 100.0 2.5E-43 5.4E-48 346.2 30.2 328 1-371 6-368 (552)
46 PRK06155 crotonobetaine/carnit 100.0 7.1E-43 1.5E-47 341.9 33.1 333 1-372 21-360 (542)
47 PRK06145 acyl-CoA synthetase; 100.0 5.9E-43 1.3E-47 339.4 32.2 331 1-372 2-336 (497)
48 PRK05857 acyl-CoA synthetase; 100.0 2.7E-43 5.8E-48 344.9 29.8 333 2-372 15-359 (540)
49 PRK06060 acyl-CoA synthetase; 100.0 3.7E-43 7.9E-48 354.0 30.9 321 2-372 5-330 (705)
50 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 9.8E-43 2.1E-47 340.1 32.6 337 1-372 23-370 (527)
51 PLN02574 4-coumarate--CoA liga 100.0 2E-42 4.3E-47 340.2 33.2 330 3-371 42-390 (560)
52 PRK06087 short chain acyl-CoA 100.0 3.8E-42 8.2E-47 337.5 34.0 335 2-372 24-372 (547)
53 PRK06188 acyl-CoA synthetase; 100.0 2.4E-42 5.2E-47 337.2 32.0 334 2-372 13-356 (524)
54 PRK08315 AMP-binding domain pr 100.0 5E-42 1.1E-46 337.6 33.8 337 1-372 16-388 (559)
55 PRK13383 acyl-CoA synthetase; 100.0 3.1E-42 6.8E-47 335.7 31.8 325 1-372 35-362 (516)
56 PRK05852 acyl-CoA synthetase; 100.0 5.6E-42 1.2E-46 335.3 32.7 338 2-372 17-371 (534)
57 PRK08633 2-acyl-glycerophospho 100.0 1.4E-42 3.1E-47 367.8 30.6 335 2-372 616-977 (1146)
58 PRK07470 acyl-CoA synthetase; 100.0 3.6E-42 7.8E-47 336.3 31.0 335 1-372 7-357 (528)
59 PLN02330 4-coumarate--CoA liga 100.0 4.7E-42 1E-46 336.7 31.9 332 1-371 28-377 (546)
60 PRK10252 entF enterobactin syn 100.0 1.5E-42 3.3E-47 371.4 30.6 325 2-372 459-793 (1296)
61 PRK07786 long-chain-fatty-acid 100.0 5.4E-42 1.2E-46 336.0 31.9 335 1-372 17-362 (542)
62 TIGR02262 benz_CoA_lig benzoat 100.0 1.5E-41 3.2E-46 330.4 34.2 332 5-371 8-346 (508)
63 PRK05851 long-chain-fatty-acid 100.0 3.6E-42 7.8E-47 335.8 29.1 324 1-372 1-362 (525)
64 PRK03584 acetoacetyl-CoA synth 100.0 8.1E-42 1.7E-46 341.6 32.3 334 2-372 87-455 (655)
65 PRK08008 caiC putative crotono 100.0 2E-41 4.4E-46 330.2 33.2 335 2-372 8-357 (517)
66 PRK12467 peptide synthase; Pro 100.0 2.7E-42 5.9E-47 394.5 30.6 323 2-372 3096-3426(3956)
67 PRK07787 acyl-CoA synthetase; 100.0 2E-41 4.3E-46 326.5 32.0 300 12-372 11-310 (471)
68 PRK12583 acyl-CoA synthetase; 100.0 3.7E-41 8E-46 331.4 34.0 336 2-372 19-390 (558)
69 PRK12476 putative fatty-acid-- 100.0 1.9E-41 4.2E-46 336.4 31.7 333 1-372 34-419 (612)
70 PRK07008 long-chain-fatty-acid 100.0 2.8E-41 6E-46 330.7 32.3 335 2-372 11-373 (539)
71 COG1021 EntE Peptide arylation 100.0 8.9E-43 1.9E-47 304.5 19.0 336 2-372 29-376 (542)
72 PRK12492 long-chain-fatty-acid 100.0 2.9E-41 6.4E-46 332.1 32.2 338 1-372 24-403 (562)
73 PRK08279 long-chain-acyl-CoA s 100.0 2.4E-41 5.1E-46 335.3 31.1 322 1-362 37-369 (600)
74 PRK07059 Long-chain-fatty-acid 100.0 3.7E-41 8E-46 331.2 32.1 336 2-372 24-397 (557)
75 PRK09088 acyl-CoA synthetase; 100.0 3.1E-41 6.7E-46 326.6 31.0 317 8-372 2-323 (488)
76 PRK07769 long-chain-fatty-acid 100.0 3.7E-41 8.1E-46 335.6 32.1 331 1-371 21-407 (631)
77 PRK06178 acyl-CoA synthetase; 100.0 6.9E-41 1.5E-45 329.9 33.1 336 1-371 33-403 (567)
78 TIGR01217 ac_ac_CoA_syn acetoa 100.0 4.1E-41 9E-46 335.5 31.4 333 2-372 88-456 (652)
79 TIGR03443 alpha_am_amid L-amin 100.0 1.5E-41 3.2E-46 365.4 30.3 331 2-371 237-609 (1389)
80 PRK07867 acyl-CoA synthetase; 100.0 6.5E-41 1.4E-45 327.0 31.9 324 2-371 6-329 (529)
81 PRK10946 entE enterobactin syn 100.0 6.8E-41 1.5E-45 327.7 32.0 336 2-372 26-371 (536)
82 PRK13388 acyl-CoA synthetase; 100.0 6.9E-41 1.5E-45 327.7 32.0 320 2-366 4-324 (540)
83 TIGR03205 pimA dicarboxylate-- 100.0 1.4E-40 3E-45 326.0 34.1 333 2-370 22-380 (541)
84 PRK05620 long-chain-fatty-acid 100.0 1.1E-40 2.3E-45 329.0 33.2 336 1-371 10-374 (576)
85 PRK06018 putative acyl-CoA syn 100.0 5.8E-41 1.2E-45 328.7 31.0 335 1-372 10-373 (542)
86 PRK06710 long-chain-fatty-acid 100.0 6.6E-41 1.4E-45 329.8 31.4 336 1-371 24-392 (563)
87 PRK08751 putative long-chain f 100.0 6.3E-41 1.4E-45 329.8 30.9 337 2-372 26-399 (560)
88 PRK06814 acylglycerophosphoeth 100.0 6.8E-41 1.5E-45 354.3 32.9 332 2-371 632-975 (1140)
89 TIGR01734 D-ala-DACP-lig D-ala 100.0 7.2E-41 1.6E-45 325.1 30.1 324 2-372 1-333 (502)
90 PLN03102 acyl-activating enzym 100.0 1.6E-40 3.5E-45 327.6 32.2 306 2-344 15-340 (579)
91 PRK12316 peptide synthase; Pro 100.0 4.2E-41 9E-46 390.4 31.8 325 2-372 512-842 (5163)
92 PRK12467 peptide synthase; Pro 100.0 5.2E-41 1.1E-45 384.1 32.1 326 2-372 1575-1909(3956)
93 KOG1179 Very long-chain acyl-C 100.0 3.6E-41 7.9E-46 306.6 24.3 307 2-345 78-398 (649)
94 PRK04813 D-alanine--poly(phosp 100.0 3.2E-40 7E-45 320.6 31.3 325 1-372 2-335 (503)
95 PRK08974 long-chain-fatty-acid 100.0 5.3E-40 1.2E-44 323.2 32.9 337 2-372 24-395 (560)
96 PRK07798 acyl-CoA synthetase; 100.0 6.9E-40 1.5E-44 320.5 33.2 335 1-372 3-366 (533)
97 PRK12316 peptide synthase; Pro 100.0 1E-40 2.2E-45 387.1 31.7 325 2-372 4552-4884(5163)
98 PRK05691 peptide synthase; Val 100.0 1.7E-40 3.6E-45 382.8 32.9 326 2-372 3721-4057(4334)
99 PRK06164 acyl-CoA synthetase; 100.0 7.2E-40 1.6E-44 321.0 32.1 333 1-371 10-366 (540)
100 PRK07868 acyl-CoA synthetase; 100.0 9.9E-40 2.1E-44 337.6 31.8 322 1-369 447-784 (994)
101 PRK13390 acyl-CoA synthetase; 100.0 1.7E-39 3.8E-44 315.4 29.8 327 8-372 4-339 (501)
102 PRK05691 peptide synthase; Val 100.0 5.5E-40 1.2E-44 378.5 30.8 323 2-372 1132-1460(4334)
103 PRK08308 acyl-CoA synthetase; 100.0 4.6E-39 1E-43 304.9 30.9 276 19-370 1-276 (414)
104 PLN02479 acetate-CoA ligase 100.0 8.7E-39 1.9E-43 314.8 33.8 335 1-371 20-389 (567)
105 KOG1180 Acyl-CoA synthetase [L 100.0 1.6E-39 3.4E-44 294.8 25.9 350 2-371 42-470 (678)
106 PRK09192 acyl-CoA synthetase; 100.0 7E-39 1.5E-43 316.2 31.6 333 1-372 21-402 (579)
107 PRK09029 O-succinylbenzoic aci 100.0 6.7E-39 1.5E-43 307.8 30.4 302 1-370 2-304 (458)
108 PRK05850 acyl-CoA synthetase; 100.0 5.8E-39 1.3E-43 317.0 30.5 302 1-344 1-335 (578)
109 PRK13391 acyl-CoA synthetase; 100.0 9.2E-39 2E-43 311.0 31.1 330 8-372 4-344 (511)
110 PRK12406 long-chain-fatty-acid 100.0 1.7E-38 3.8E-43 309.0 32.3 320 18-372 3-341 (509)
111 PRK08162 acyl-CoA synthetase; 100.0 9.2E-38 2E-42 306.4 34.0 334 1-371 18-375 (545)
112 TIGR01733 AA-adenyl-dom amino 100.0 3.2E-38 7E-43 298.5 27.8 300 28-372 1-309 (408)
113 PRK07768 long-chain-fatty-acid 100.0 7E-38 1.5E-42 307.2 30.6 329 2-372 3-377 (545)
114 PRK07445 O-succinylbenzoic aci 100.0 4.5E-38 9.8E-43 300.7 27.1 277 25-369 18-297 (452)
115 PRK08276 long-chain-fatty-acid 100.0 9.8E-38 2.1E-42 303.2 29.1 319 18-372 3-331 (502)
116 PTZ00297 pantothenate kinase; 100.0 3.4E-37 7.4E-42 320.0 28.2 326 2-371 428-816 (1452)
117 TIGR01923 menE O-succinylbenzo 100.0 2.6E-36 5.6E-41 288.1 27.7 284 28-369 1-285 (436)
118 PLN03051 acyl-activating enzym 100.0 1.6E-36 3.4E-41 294.2 23.9 281 75-372 1-308 (499)
119 KOG1175 Acyl-CoA synthetase [L 100.0 4.3E-36 9.4E-41 284.4 24.0 326 14-372 78-431 (626)
120 COG1020 EntF Non-ribosomal pep 100.0 2E-29 4.2E-34 252.1 28.1 322 2-370 228-556 (642)
121 TIGR03089 conserved hypothetic 100.0 6.5E-27 1.4E-31 202.1 19.2 207 7-271 2-227 (227)
122 TIGR02372 4_coum_CoA_lig 4-cou 99.9 4.2E-23 9.1E-28 192.2 17.8 169 169-368 94-265 (386)
123 PRK07824 O-succinylbenzoic aci 99.9 1.4E-21 3E-26 181.8 18.0 172 166-370 31-207 (358)
124 TIGR02155 PA_CoA_ligase phenyl 99.8 1.6E-19 3.4E-24 171.6 16.5 184 168-371 73-262 (422)
125 KOG3628 Predicted AMP-binding 99.8 3.3E-17 7.2E-22 159.8 26.9 298 2-327 771-1092(1363)
126 TIGR03335 F390_ftsA coenzyme F 99.8 3.9E-18 8.5E-23 162.6 16.4 180 168-372 84-268 (445)
127 KOG1178 Non-ribosomal peptide 99.5 3.6E-14 7.8E-19 142.3 10.7 305 3-344 38-369 (1032)
128 COG1541 PaaK Coenzyme F390 syn 99.5 4.4E-13 9.5E-18 123.0 15.7 159 168-343 88-250 (438)
129 TIGR02304 aden_form_hyp probab 99.1 7.2E-10 1.6E-14 104.1 13.9 147 172-344 101-252 (430)
130 KOG3628 Predicted AMP-binding 99.1 6.9E-10 1.5E-14 109.6 12.3 289 4-325 97-420 (1363)
131 PF04443 LuxE: Acyl-protein sy 98.2 0.00014 2.9E-09 67.2 16.4 166 168-345 87-274 (365)
132 COG1541 PaaK Coenzyme F390 syn 95.5 0.16 3.4E-06 47.7 10.5 92 26-135 109-202 (438)
133 PF03321 GH3: GH3 auxin-respon 94.0 0.15 3.2E-06 50.0 6.9 32 166-197 76-108 (528)
134 PLN02247 indole-3-acetic acid- 91.9 8.7 0.00019 38.2 15.4 43 300-342 290-334 (606)
135 PLN02620 indole-3-acetic acid- 90.7 9.2 0.0002 38.0 14.2 44 299-342 300-345 (612)
136 TIGR03335 F390_ftsA coenzyme F 85.6 8.2 0.00018 37.1 10.4 83 25-127 104-188 (445)
137 TIGR02155 PA_CoA_ligase phenyl 85.4 7.5 0.00016 36.9 10.0 88 26-131 94-183 (422)
138 PRK07656 long-chain-fatty-acid 78.9 22 0.00049 34.4 10.9 86 25-131 184-271 (513)
139 PLN02736 long-chain acyl-CoA s 77.8 65 0.0014 32.6 14.1 105 167-285 56-166 (651)
140 COG0031 CysK Cysteine synthase 77.7 16 0.00034 32.8 8.4 58 65-123 59-116 (300)
141 PF00501 AMP-binding: AMP-bind 76.0 17 0.00038 34.0 9.0 88 168-275 8-99 (417)
142 PRK06334 long chain fatty acid 75.8 38 0.00083 33.3 11.6 98 14-131 181-289 (539)
143 PRK06187 long-chain-fatty-acid 75.4 27 0.00058 33.9 10.3 86 25-131 185-271 (521)
144 PRK09274 peptide synthase; Pro 73.2 30 0.00065 34.0 10.1 98 168-277 19-121 (552)
145 PLN03052 acetate--CoA ligase; 71.0 46 0.001 34.3 11.1 99 168-279 188-290 (728)
146 KOG1177 Long chain fatty acid 70.9 57 0.0012 31.4 10.4 97 14-130 232-339 (596)
147 TIGR03089 conserved hypothetic 70.6 29 0.00062 29.9 8.2 52 63-116 173-226 (227)
148 PF06543 Lac_bphage_repr: Lact 70.4 3.8 8.1E-05 25.1 1.8 26 306-331 22-47 (49)
149 PRK07529 AMP-binding domain pr 69.3 35 0.00077 34.4 9.8 98 167-277 37-137 (632)
150 PRK04319 acetyl-CoA synthetase 68.9 52 0.0011 32.6 10.8 69 63-131 241-311 (570)
151 PRK08315 AMP-binding domain pr 68.4 42 0.00091 33.0 10.0 83 25-127 217-301 (559)
152 PLN03051 acyl-activating enzym 67.7 45 0.00098 32.4 9.9 68 63-130 155-223 (499)
153 TIGR03098 ligase_PEP_1 acyl-Co 66.6 54 0.0012 31.7 10.3 86 25-131 179-265 (515)
154 PLN02654 acetate-CoA ligase 66.1 65 0.0014 32.8 10.9 97 168-279 102-202 (666)
155 TIGR02188 Ac_CoA_lig_AcsA acet 66.1 64 0.0014 32.4 10.9 97 167-278 69-169 (625)
156 PTZ00237 acetyl-CoA synthetase 65.8 64 0.0014 32.7 10.8 94 169-277 75-172 (647)
157 PRK06164 acyl-CoA synthetase; 65.7 77 0.0017 31.0 11.2 96 15-131 180-285 (540)
158 TIGR01733 AA-adenyl-dom amino 65.6 85 0.0018 29.1 11.1 98 15-132 119-228 (408)
159 PRK00174 acetyl-CoA synthetase 65.2 67 0.0014 32.4 10.8 97 167-278 79-179 (637)
160 COG1022 FAA1 Long-chain acyl-C 63.8 89 0.0019 31.4 10.9 100 12-132 187-296 (613)
161 PRK12583 acyl-CoA synthetase; 62.8 69 0.0015 31.4 10.3 82 25-126 219-302 (558)
162 KOG1176 Acyl-CoA synthetase [L 62.7 74 0.0016 31.4 10.1 88 187-286 43-136 (537)
163 PLN03102 acyl-activating enzym 62.5 91 0.002 31.0 11.1 94 168-282 27-124 (579)
164 TIGR01923 menE O-succinylbenzo 61.4 52 0.0011 31.0 8.9 84 25-131 129-213 (436)
165 TIGR03590 PseG pseudaminic aci 60.5 79 0.0017 28.1 9.3 75 25-123 10-88 (279)
166 PRK08008 caiC putative crotono 60.5 97 0.0021 30.1 10.8 100 168-283 20-123 (517)
167 PRK07638 acyl-CoA synthetase; 60.5 85 0.0018 30.2 10.3 87 25-132 161-248 (487)
168 PRK08308 acyl-CoA synthetase; 60.3 1.3E+02 0.0028 28.2 11.3 86 25-131 119-206 (414)
169 PRK05857 acyl-CoA synthetase; 60.0 73 0.0016 31.3 9.8 93 167-278 26-122 (540)
170 PRK03584 acetoacetyl-CoA synth 59.6 90 0.0019 31.6 10.6 95 168-278 97-195 (655)
171 PRK13295 cyclohexanecarboxylat 59.6 82 0.0018 30.9 10.2 96 168-278 37-136 (547)
172 PRK06188 acyl-CoA synthetase; 59.5 80 0.0017 30.7 10.0 84 25-129 186-269 (524)
173 PRK07470 acyl-CoA synthetase; 58.5 1.3E+02 0.0028 29.3 11.3 67 64-130 202-269 (528)
174 PRK08316 acyl-CoA synthetase; 58.4 1E+02 0.0022 29.8 10.6 85 188-284 35-123 (523)
175 PRK05605 long-chain-fatty-acid 58.1 1.1E+02 0.0023 30.3 10.8 95 168-283 45-143 (573)
176 PRK07788 acyl-CoA synthetase; 57.9 67 0.0015 31.5 9.2 83 189-283 74-160 (549)
177 TIGR02316 propion_prpE propion 57.5 1.3E+02 0.0028 30.3 11.3 95 168-277 65-163 (628)
178 PRK13388 acyl-CoA synthetase; 57.2 1.1E+02 0.0024 30.0 10.6 82 189-282 26-112 (540)
179 PLN02330 4-coumarate--CoA liga 57.1 77 0.0017 31.1 9.5 96 168-282 41-140 (546)
180 PRK07798 acyl-CoA synthetase; 57.1 1.3E+02 0.0029 29.1 11.1 85 188-284 27-115 (533)
181 PLN02246 4-coumarate--CoA liga 56.2 1.2E+02 0.0025 29.8 10.5 97 168-283 36-136 (537)
182 PRK07514 malonyl-CoA synthase; 55.9 1.3E+02 0.0029 28.9 10.8 84 188-283 27-114 (504)
183 TIGR01217 ac_ac_CoA_syn acetoa 55.8 1.1E+02 0.0025 30.9 10.6 94 169-278 98-195 (652)
184 PRK06839 acyl-CoA synthetase; 55.8 1.5E+02 0.0032 28.5 11.1 96 168-284 15-115 (496)
185 PRK08279 long-chain-acyl-CoA s 54.9 1.2E+02 0.0027 30.1 10.6 95 168-283 50-148 (600)
186 PRK08276 long-chain-fatty-acid 54.5 1.1E+02 0.0024 29.5 10.0 83 189-283 11-97 (502)
187 PRK07059 Long-chain-fatty-acid 54.4 1.4E+02 0.0031 29.3 10.9 94 168-282 36-133 (557)
188 PLN02614 long-chain acyl-CoA s 54.3 2.2E+02 0.0049 28.9 12.4 102 168-283 58-165 (666)
189 PRK08751 putative long-chain f 54.2 1.4E+02 0.003 29.4 10.7 94 168-282 38-136 (560)
190 PLN02860 o-succinylbenzoate-Co 54.0 1.4E+02 0.003 29.5 10.8 97 14-131 170-276 (563)
191 PRK05677 long-chain-fatty-acid 53.7 1.5E+02 0.0032 29.2 10.9 93 168-281 37-134 (562)
192 COG0318 CaiC Acyl-CoA syntheta 53.0 1.6E+02 0.0034 29.0 10.8 92 168-278 24-119 (534)
193 cd00640 Trp-synth-beta_II Tryp 52.9 71 0.0015 27.6 7.6 59 67-126 49-107 (244)
194 PLN02249 indole-3-acetic acid- 52.6 11 0.00023 37.7 2.5 30 167-196 97-127 (597)
195 TIGR03443 alpha_am_amid L-amin 52.6 93 0.002 34.8 10.1 97 167-275 248-348 (1389)
196 PRK08314 long-chain-fatty-acid 52.4 1.8E+02 0.0039 28.4 11.2 94 14-128 188-292 (546)
197 COG0365 Acs Acyl-coenzyme A sy 51.5 1.2E+02 0.0026 29.9 9.4 96 173-284 27-127 (528)
198 PRK13391 acyl-CoA synthetase; 51.0 2E+02 0.0043 27.9 11.2 97 168-283 10-110 (511)
199 PRK05850 acyl-CoA synthetase; 51.0 1.9E+02 0.0042 28.5 11.3 101 168-283 14-123 (578)
200 PRK10524 prpE propionyl-CoA sy 50.9 1.7E+02 0.0037 29.3 11.0 95 168-277 66-164 (629)
201 TIGR02262 benz_CoA_lig benzoat 50.6 1.9E+02 0.0041 27.9 11.0 96 14-128 159-265 (508)
202 PLN02387 long-chain-fatty-acid 50.5 2E+02 0.0043 29.5 11.4 86 188-285 105-194 (696)
203 PRK08043 bifunctional acyl-[ac 50.4 1.7E+02 0.0037 30.0 11.0 94 14-127 363-467 (718)
204 PRK05620 long-chain-fatty-acid 50.4 2E+02 0.0044 28.4 11.3 67 63-129 219-286 (576)
205 TIGR02275 DHB_AMP_lig 2,3-dihy 50.3 1.9E+02 0.0042 28.1 11.0 96 14-130 181-288 (527)
206 PRK08633 2-acyl-glycerophospho 49.7 1.8E+02 0.0038 31.7 11.5 98 13-130 779-887 (1146)
207 PRK03640 O-succinylbenzoic aci 49.3 1.2E+02 0.0026 29.0 9.3 66 64-130 178-244 (483)
208 PRK06087 short chain acyl-CoA 48.3 1.2E+02 0.0027 29.6 9.4 89 168-276 36-128 (547)
209 PRK10946 entE enterobactin syn 48.0 1.9E+02 0.0042 28.2 10.6 86 25-131 200-288 (536)
210 PRK09088 acyl-CoA synthetase; 47.5 1.7E+02 0.0036 28.1 10.0 91 168-277 8-102 (488)
211 PLN02861 long-chain-fatty-acid 47.0 1.6E+02 0.0034 29.9 10.0 84 188-283 76-163 (660)
212 PRK13390 acyl-CoA synthetase; 46.5 2.5E+02 0.0054 27.1 11.0 91 168-277 10-104 (501)
213 PRK12492 long-chain-fatty-acid 46.1 1.8E+02 0.0039 28.7 10.1 81 188-280 48-133 (562)
214 PRK10252 entF enterobactin syn 46.1 2.1E+02 0.0045 31.7 11.5 96 14-129 596-703 (1296)
215 PLN02556 cysteine synthase/L-3 45.6 92 0.002 29.1 7.4 59 65-123 107-165 (368)
216 TIGR02379 ECA_wecE TDP-4-keto- 45.2 80 0.0017 29.5 7.0 56 63-122 66-126 (376)
217 PF01041 DegT_DnrJ_EryC1: DegT 44.6 52 0.0011 30.5 5.7 56 63-122 60-120 (363)
218 PRK13383 acyl-CoA synthetase; 44.6 1.6E+02 0.0035 28.5 9.5 84 189-284 60-147 (516)
219 PRK06155 crotonobetaine/carnit 44.5 1.5E+02 0.0032 29.1 9.2 84 189-284 46-133 (542)
220 TIGR03595 Obg_CgtA_exten Obg f 44.0 33 0.00071 23.3 3.1 33 34-74 31-63 (69)
221 PF00818 Ice_nucleation: Ice n 43.5 11 0.00023 17.4 0.4 9 334-342 1-9 (16)
222 TIGR01136 cysKM cysteine synth 43.3 2.5E+02 0.0053 25.2 10.2 58 66-124 56-113 (299)
223 KOG0025 Zn2+-binding dehydroge 42.8 86 0.0019 28.1 6.2 64 63-126 156-220 (354)
224 PLN02479 acetate-CoA ligase 42.6 3E+02 0.0066 27.1 11.1 95 167-282 32-130 (567)
225 PRK12406 long-chain-fatty-acid 42.5 1.7E+02 0.0038 28.2 9.3 84 189-284 11-98 (509)
226 COG1064 AdhP Zn-dependent alco 42.0 1E+02 0.0022 28.4 6.8 57 63-123 162-218 (339)
227 cd01563 Thr-synth_1 Threonine 41.9 2.2E+02 0.0048 25.8 9.3 58 68-126 70-127 (324)
228 PRK08162 acyl-CoA synthetase; 41.6 1.6E+02 0.0036 28.7 9.0 95 168-283 31-129 (545)
229 PLN02574 4-coumarate--CoA liga 41.6 2.9E+02 0.0062 27.2 10.8 97 168-283 52-153 (560)
230 PTZ00342 acyl-CoA synthetase; 41.6 4.3E+02 0.0092 27.5 12.7 103 167-285 73-193 (746)
231 PRK12476 putative fatty-acid-- 41.4 3.8E+02 0.0082 26.8 11.9 102 168-283 47-156 (612)
232 PRK13237 tyrosine phenol-lyase 41.1 1.7E+02 0.0037 28.2 8.4 48 63-115 112-174 (460)
233 PRK06381 threonine synthase; V 41.0 1.8E+02 0.0038 26.4 8.5 56 71-126 65-120 (319)
234 PRK06814 acylglycerophosphoeth 40.8 3.4E+02 0.0073 29.7 11.9 97 14-130 791-898 (1140)
235 PRK09162 hypoxanthine-guanine 40.8 83 0.0018 25.9 5.7 47 24-88 14-60 (181)
236 PRK11706 TDP-4-oxo-6-deoxy-D-g 40.6 1.1E+02 0.0024 28.5 7.2 55 63-121 66-125 (375)
237 PRK06060 acyl-CoA synthetase; 39.4 1.9E+02 0.0042 29.5 9.4 91 168-280 19-113 (705)
238 cd01445 TST_Repeats Thiosulfat 38.3 90 0.0019 24.4 5.3 34 63-96 90-126 (138)
239 KOG1138 Predicted cleavage and 37.8 1E+02 0.0022 29.8 6.2 62 64-125 414-476 (653)
240 TIGR03208 cyc_hxne_CoA_lg cycl 37.1 4E+02 0.0088 25.9 11.6 95 14-129 193-298 (538)
241 PRK06178 acyl-CoA synthetase; 36.8 2.2E+02 0.0049 28.0 9.2 84 189-284 58-145 (567)
242 PF01297 TroA: Periplasmic sol 36.1 1.5E+02 0.0033 25.8 7.1 75 70-145 151-230 (256)
243 TIGR02370 pyl_corrinoid methyl 36.1 2.6E+02 0.0056 23.4 10.1 86 213-319 86-181 (197)
244 PRK06018 putative acyl-CoA syn 35.9 2.3E+02 0.0049 27.8 9.0 84 188-283 38-125 (542)
245 TIGR01734 D-ala-DACP-lig D-ala 35.2 2.5E+02 0.0055 26.9 9.1 85 25-129 159-246 (502)
246 PRK05852 acyl-CoA synthetase; 34.6 3.9E+02 0.0084 26.0 10.4 87 25-131 194-283 (534)
247 PLN03013 cysteine synthase 34.5 2.8E+02 0.006 26.6 8.7 60 65-124 171-230 (429)
248 COG0399 WecE Predicted pyridox 34.4 1.5E+02 0.0032 27.8 6.8 69 63-135 69-147 (374)
249 PRK07787 acyl-CoA synthetase; 34.4 4.2E+02 0.009 25.3 11.2 84 25-130 146-231 (471)
250 PRK07008 long-chain-fatty-acid 34.3 1.4E+02 0.0031 29.2 7.3 68 63-130 214-282 (539)
251 PRK13382 acyl-CoA synthetase; 34.3 2.8E+02 0.006 27.2 9.3 94 168-282 56-153 (537)
252 PF02073 Peptidase_M29: Thermo 34.2 1.3E+02 0.0028 28.5 6.5 52 32-98 3-56 (398)
253 cd06448 L-Ser-dehyd Serine deh 34.0 2.8E+02 0.006 25.2 8.5 58 66-124 49-106 (316)
254 PRK05973 replicative DNA helic 34.0 1.8E+02 0.0038 25.3 6.8 52 64-115 60-115 (237)
255 PLN02430 long-chain-fatty-acid 32.8 5.4E+02 0.012 26.1 13.7 100 168-281 55-160 (660)
256 cd07050 BMC_EutL_repeat2 ethan 32.5 74 0.0016 22.2 3.3 34 63-96 10-43 (87)
257 COG1021 EntE Peptide arylation 32.5 4.5E+02 0.0097 25.1 10.1 51 190-242 54-107 (542)
258 PRK05851 long-chain-fatty-acid 32.5 4.7E+02 0.01 25.4 10.6 90 14-123 150-253 (525)
259 COG1167 ARO8 Transcriptional r 32.0 1.2E+02 0.0026 29.4 6.1 77 174-280 157-237 (459)
260 PRK08974 long-chain-fatty-acid 31.7 3.9E+02 0.0085 26.2 9.9 92 168-280 36-132 (560)
261 PRK06710 long-chain-fatty-acid 31.3 2.5E+02 0.0055 27.6 8.5 80 189-280 49-132 (563)
262 PRK10696 tRNA 2-thiocytidine b 30.3 3.7E+02 0.0081 23.5 9.8 60 64-123 25-95 (258)
263 PTZ00216 acyl-CoA synthetase; 29.9 4.6E+02 0.01 26.8 10.3 87 187-285 119-209 (700)
264 cd07085 ALDH_F6_MMSDH Methylma 29.8 4.1E+02 0.009 25.7 9.5 45 213-257 139-188 (478)
265 PRK07769 long-chain-fatty-acid 29.8 5.8E+02 0.013 25.6 12.2 102 168-283 34-143 (631)
266 PRK02261 methylaspartate mutas 29.8 2.7E+02 0.0059 21.7 7.8 42 82-123 21-62 (137)
267 PRK11658 UDP-4-amino-4-deoxy-L 29.6 2.3E+02 0.005 26.4 7.5 54 63-120 68-126 (379)
268 TIGR03588 PseC UDP-4-keto-6-de 29.1 2.6E+02 0.0056 26.0 7.7 55 63-120 64-126 (380)
269 PRK09029 O-succinylbenzoic aci 29.0 2.8E+02 0.006 26.4 8.2 88 168-276 16-107 (458)
270 PLN02565 cysteine synthase 28.5 4.6E+02 0.0099 23.9 11.3 60 65-124 63-122 (322)
271 COG1110 Reverse gyrase [DNA re 28.4 5.2E+02 0.011 27.9 9.8 38 265-314 379-416 (1187)
272 COG2236 Predicted phosphoribos 28.2 98 0.0021 25.9 4.1 23 24-46 4-26 (192)
273 PRK12582 acyl-CoA synthetase; 28.1 2.8E+02 0.006 27.9 8.3 94 168-276 62-164 (624)
274 PF07722 Peptidase_C26: Peptid 28.1 75 0.0016 27.1 3.6 30 86-115 31-60 (217)
275 cd07131 ALDH_AldH-CAJ73105 Unc 27.9 3.5E+02 0.0076 26.2 8.6 34 213-246 138-172 (478)
276 PRK07867 acyl-CoA synthetase; 27.3 5.9E+02 0.013 24.8 11.4 93 14-127 150-253 (529)
277 PRK07476 eutB threonine dehydr 27.3 4.8E+02 0.01 23.7 9.6 54 73-126 71-124 (322)
278 cd00615 Orn_deC_like Ornithine 27.2 2.6E+02 0.0057 24.9 7.2 56 64-122 95-161 (294)
279 cd02067 B12-binding B12 bindin 26.9 2.7E+02 0.0058 20.7 7.3 36 88-123 23-58 (119)
280 COG1167 ARO8 Transcriptional r 26.9 1.8E+02 0.0039 28.1 6.3 60 64-124 175-235 (459)
281 PRK10719 eutA reactivating fac 26.7 5.1E+02 0.011 25.2 9.0 53 16-86 374-427 (475)
282 PRK15407 lipopolysaccharide bi 26.3 2.5E+02 0.0055 26.9 7.2 55 64-122 107-166 (438)
283 cd01561 CBS_like CBS_like: Thi 26.1 4.6E+02 0.0099 23.3 8.5 58 67-125 52-109 (291)
284 cd01019 ZnuA Zinc binding prot 25.9 4.5E+02 0.0098 23.4 8.4 70 68-137 178-251 (286)
285 cd07092 ALDH_ABALDH-YdcW Esche 25.6 3.9E+02 0.0084 25.6 8.4 34 213-246 121-155 (450)
286 PRK11761 cysM cysteine synthas 25.3 5E+02 0.011 23.3 11.1 58 65-123 60-117 (296)
287 PRK04813 D-alanine--poly(phosp 25.2 3.4E+02 0.0074 26.0 8.1 76 189-276 27-106 (503)
288 cd06534 ALDH-SF NAD(P)+-depend 25.2 5.4E+02 0.012 23.7 10.2 34 213-246 95-129 (367)
289 PRK07768 long-chain-fatty-acid 25.1 6.4E+02 0.014 24.5 10.6 94 14-127 150-258 (545)
290 PRK07786 long-chain-fatty-acid 25.1 4.2E+02 0.009 25.9 8.8 81 189-281 42-126 (542)
291 TIGR00936 ahcY adenosylhomocys 25.1 3.5E+02 0.0075 25.7 7.6 54 67-120 31-86 (406)
292 PRK11493 sseA 3-mercaptopyruva 25.0 1.3E+02 0.0028 26.8 4.7 54 26-96 201-259 (281)
293 PF06277 EutA: Ethanolamine ut 24.7 6.2E+02 0.013 24.6 9.1 53 15-85 372-425 (473)
294 KOG0023 Alcohol dehydrogenase, 24.4 5E+02 0.011 23.9 8.0 69 63-134 177-245 (360)
295 PRK09192 acyl-CoA synthetase; 24.4 5.1E+02 0.011 25.6 9.3 85 188-284 48-143 (579)
296 TIGR01279 DPOR_bchN light-inde 24.3 6.1E+02 0.013 24.0 10.0 56 67-123 273-329 (407)
297 PRK08180 feruloyl-CoA synthase 24.3 3.7E+02 0.0081 26.9 8.4 93 168-276 52-153 (614)
298 PLN02238 hypoxanthine phosphor 24.3 2.1E+02 0.0045 23.8 5.5 21 25-45 10-30 (189)
299 PRK15400 lysine decarboxylase 24.1 2.5E+02 0.0055 28.9 6.9 59 64-125 231-308 (714)
300 cd02071 MM_CoA_mut_B12_BD meth 23.6 3.3E+02 0.0071 20.6 8.2 38 86-123 21-58 (122)
301 PRK13265 glycine/sarcosine/bet 23.4 1.5E+02 0.0032 23.2 3.9 65 302-366 36-105 (154)
302 TIGR01203 HGPRTase hypoxanthin 23.2 2.5E+02 0.0054 22.7 5.6 19 27-45 3-21 (166)
303 PRK09545 znuA high-affinity zi 23.1 5.7E+02 0.012 23.2 8.5 70 69-140 203-278 (311)
304 cd07109 ALDH_AAS00426 Uncharac 23.1 4.7E+02 0.01 25.1 8.4 34 213-246 120-154 (454)
305 PF02729 OTCace_N: Aspartate/o 22.3 3.9E+02 0.0085 21.0 10.8 71 65-136 36-115 (142)
306 cd07135 ALDH_F14-YMR110C Sacch 22.3 5.7E+02 0.012 24.5 8.7 35 212-246 110-145 (436)
307 TIGR03205 pimA dicarboxylate-- 22.2 4.8E+02 0.01 25.4 8.6 77 189-277 46-126 (541)
308 PRK04870 histidinol-phosphate 21.6 3.3E+02 0.0071 24.9 6.9 52 66-120 103-158 (356)
309 cd01449 TST_Repeat_2 Thiosulfa 21.5 2.1E+02 0.0045 21.1 4.7 32 63-94 73-104 (118)
310 KOG1252 Cystathionine beta-syn 21.4 6.5E+02 0.014 23.3 9.0 61 64-124 99-159 (362)
311 cd07116 ALDH_ACDHII-AcoD Ralst 21.4 5.4E+02 0.012 24.9 8.6 35 212-246 138-173 (479)
312 cd07078 ALDH NAD(P)+ dependent 21.3 7E+02 0.015 23.6 9.5 45 213-257 99-148 (432)
313 PF08479 POTRA_2: POTRA domain 21.2 1.4E+02 0.003 20.3 3.3 28 23-50 27-54 (76)
314 PF11974 MG1: Alpha-2-macroglo 21.2 75 0.0016 23.2 2.0 14 357-370 24-37 (97)
315 TIGR01139 cysK cysteine syntha 21.1 6E+02 0.013 22.7 10.1 59 65-124 54-112 (298)
316 PRK06702 O-acetylhomoserine am 21.0 5.3E+02 0.011 24.7 8.2 56 65-122 97-154 (432)
317 cd07100 ALDH_SSADH1_GabD1 Myco 20.9 5.2E+02 0.011 24.6 8.2 34 213-246 99-133 (429)
318 cd06447 D-Ser-dehyd D-Serine d 20.9 5.6E+02 0.012 24.3 8.2 58 71-128 136-193 (404)
319 cd07126 ALDH_F12_P5CDH Delta(1 20.9 6.4E+02 0.014 24.6 8.8 34 212-245 144-178 (489)
320 TIGR01722 MMSDH methylmalonic 20.8 5.1E+02 0.011 25.1 8.2 34 213-246 139-173 (477)
321 cd07110 ALDH_F10_BADH Arabidop 20.3 5.3E+02 0.012 24.7 8.2 34 213-246 123-157 (456)
322 cd01017 AdcA Metal binding pro 20.1 5.1E+02 0.011 22.9 7.6 72 69-140 171-246 (282)
323 cd07102 ALDH_EDX86601 Uncharac 20.1 5.9E+02 0.013 24.4 8.5 34 213-246 119-153 (452)
324 TIGR02618 tyr_phenol_ly tyrosi 20.0 8E+02 0.017 23.7 10.1 47 63-114 105-166 (450)
No 1
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.4e-49 Score=383.20 Aligned_cols=337 Identities=27% Similarity=0.414 Sum_probs=277.7
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCce--eeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKS--YSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~--~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~ 78 (372)
+++.+.+.+++..+|+++|+++.+.. +||+||.++++++|..|++. |+++||+|+|+++|+
T Consensus 11 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~-----------------~v~~gdrVail~~N~ 73 (534)
T COG0318 11 LTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQAL-----------------GVKPGDRVAILLPNS 73 (534)
T ss_pred ccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCC
Confidence 47889999999999999999998777 99999999999999999995 899999999999999
Q ss_pred HhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCC-CCC---CCcc
Q 017382 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVP-NVS---SETT 154 (372)
Q Consensus 79 ~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~ 154 (372)
+++++++|||+++|++++|++|.+...++.++++.++++.+++++...+.................... ... ....
T Consensus 74 ~e~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (534)
T COG0318 74 PEFLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLEA 153 (534)
T ss_pred HHHHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHHH
Confidence 999999999999999999999999999999999999999999998865655555443311111111111 000 0011
Q ss_pred cccccccc--cccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc--cCCCCeEEEecCchhHHHHHHHH
Q 017382 155 VFDQSQAE--KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNAL 230 (372)
Q Consensus 155 ~~~~~~~~--~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~~~~~~~~~~ 230 (372)
........ ......++++++|+|||||||.||||++||+++..+.......+. ++..|++++++|++|.+|+...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~ 233 (534)
T COG0318 154 LAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGL 233 (534)
T ss_pred HhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHH
Confidence 11110001 111156899999999999999999999999999999999988888 89999999999999999998777
Q ss_pred HHHHHcCceEEEcC--CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhcc-CceE
Q 017382 231 LAPLYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK-QLRL 307 (372)
Q Consensus 231 ~~~l~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~-~lr~ 307 (372)
+.+++.|+++++.+ .|+++.++.. +.++++|++.++|+++..+++.... ...+++ ++|.
T Consensus 234 ~~~~~~G~~~v~~~~~~f~~~~~~~~----------i~~~~~t~~~~vPt~~~~ll~~~~~--------~~~~~~~~lr~ 295 (534)
T COG0318 234 LAPLLGGGTLVLLSPEPFDPEEVLWL----------IEKYKVTVLSGVPTFLRELLDNPEK--------DDDDLSSSLRL 295 (534)
T ss_pred HHHHHcCCEEEeCCCCCcCHHHHHHH----------HHHhcceEEecchHHHHHHHhCCcc--------CccccccceEE
Confidence 77799999999998 5999999998 6778899999999999999887432 222344 4999
Q ss_pred EEecCCCCCHHHHHHHHHHhC-CccccccccccccccccCCCCCC--CCCCcccccCCCceEEEeecC
Q 017382 308 MMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 308 v~~gG~~~~~~~~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~~~~--~~~~svG~p~~g~~i~Ivd~d 372 (372)
++.||++++++++++|++.|+ ..++++||+||++.+++...... .+.+++|+|+||++++|+|.|
T Consensus 296 ~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~ 363 (534)
T COG0318 296 VLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPD 363 (534)
T ss_pred EEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCC
Confidence 999999999999999999997 57999999999987665444433 577888999999999999965
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=3.8e-49 Score=372.01 Aligned_cols=329 Identities=23% Similarity=0.295 Sum_probs=264.1
Q ss_pred HHHhCC-cCCCceEEEeCC-----ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 7 AYKKGS-MARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 7 l~~~a~-~~~~~~al~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+.++.. ..+|+.|+++++ +++||+||.+.+.++|+.|++. .|+ +||+|++++|+.+|
T Consensus 15 ~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~----------------~gv-kGDrV~iymp~~pe 77 (528)
T COG0365 15 LDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDL----------------GGV-KGDRVAIYMPNSPE 77 (528)
T ss_pred hhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHh----------------CCC-CCCEEEEEcCCCHH
Confidence 555554 347899999853 6799999999999999999874 478 99999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHh-----hcCCcccccCCCCCCCCCccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS-----KSGAKFSLIPPVPNVSSETTV 155 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 155 (372)
.+++++||+++|++.+|+.+.++++.+...+++++++++|+++...+..+.... ......+++.... .......
T Consensus 78 ~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~-~~~~~~~ 156 (528)
T COG0365 78 AVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG-LWYDEAV 156 (528)
T ss_pred HHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc-ccHHHHh
Confidence 999999999999999999999999999999999999999998865443222110 0000011111111 0000001
Q ss_pred ccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHH-hhcccCCCCeEEEecCchhHHHHHHHHHHHH
Q 017382 156 FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT-EAWEYTSADQFLHCLPLHHVHGLFNALLAPL 234 (372)
Q Consensus 156 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~-~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l 234 (372)
..............+|+++|+|||||||+||||+++|.+++....... ..+.+.++|++++..++.|+.|.+..++.+|
T Consensus 157 ~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL 236 (528)
T COG0365 157 EKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPL 236 (528)
T ss_pred hccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHH
Confidence 111111123336789999999999999999999999998777666555 4678889999999999999999999999999
Q ss_pred HcCceEEEcCC--C-chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEec
Q 017382 235 YAGATVEFMPK--F-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (372)
Q Consensus 235 ~~G~~~~~~~~--~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~g 311 (372)
.+|++.++.+. + +++.+++. ++++++|.+++.|+.+++|++... ..++++++||.+.++
T Consensus 237 ~~Gat~~~~eg~p~~~~~~~~~~----------ie~~~vt~~~tsPT~~R~l~~~g~--------~~~~dlssLr~~~Sa 298 (528)
T COG0365 237 ASGATTVLYDGRPFYSPERLWEA----------LEKYKVTIFGTSPTFLRRLMKLGL--------GEPYDLSSLRVLGSA 298 (528)
T ss_pred hcCCeEEEeCCCCCCCHHHHHHH----------HHHhCCceEeeCHHHHHHHHhcCC--------cccccchhheeeecc
Confidence 99999999864 2 48899998 889999999999999999988621 456899999999999
Q ss_pred CCCCCHHHHHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeecC
Q 017382 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
|||+++++++++.+.+|+++.+.||+||++++...+.. ..++++.|+|+||+++.|+|+|
T Consensus 299 GEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~-~~~~g~~g~p~pG~~~~vvdd~ 358 (528)
T COG0365 299 GEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP-PVKNGSSGLPLPGYAVRRVDDE 358 (528)
T ss_pred CCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC-CcCCCCCCCCCCCceeEEECCC
Confidence 99999999999999999999999999999965554433 4455666999999999999975
No 3
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=6.1e-48 Score=368.65 Aligned_cols=340 Identities=24% Similarity=0.332 Sum_probs=267.7
Q ss_pred HHHHHHHHhCCcCCCceEEEe----CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCC
Q 017382 2 EVFKAAYKKGSMARDSVAIRA----DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~----~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n 77 (372)
++...+.++++.+|+..|+.. ..+.+||+|+.+++..+|++|++ +|+..||+|+|++.|
T Consensus 17 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~-----------------lg~~~gdrvai~a~n 79 (613)
T COG1022 17 TLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLS-----------------LGIPAGDRVAIFAAN 79 (613)
T ss_pred cHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEEeCC
Confidence 467889999999999889984 46899999999999999999999 589779999999999
Q ss_pred CHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc-hHHHHHHHHhhcCCc---ccccC---C-----
Q 017382 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-YREVLQNVASKSGAK---FSLIP---P----- 145 (372)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~---~~~~~---~----- 145 (372)
+++|+++.+|++.+|++.||++++.+++++.+++++++++++|++.. ..+.+.......+.. ..... .
T Consensus 80 r~eW~i~d~a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (613)
T COG1022 80 RPEWAIADLAILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAK 159 (613)
T ss_pred CHHHHHHHHHHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchh
Confidence 99999999999999999999999999999999999999999999974 444444443322110 00000 0
Q ss_pred ---CCCCCC--Ccc--cccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc-cCCCCeEEEe
Q 017382 146 ---VPNVSS--ETT--VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-YTSADQFLHC 217 (372)
Q Consensus 146 ---~~~~~~--~~~--~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~l~~ 217 (372)
...... ... ..............++|+|.|+|||||||.||||++||+|+++++.......+ ++++|+.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~Lsf 239 (613)
T COG1022 160 ALVLEVFPDEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSF 239 (613)
T ss_pred hccccccccccchhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEe
Confidence 000000 000 00000111123567899999999999999999999999999999999999997 9999999999
Q ss_pred cCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhh----hccHH
Q 017382 218 LPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE----AMDTE 293 (372)
Q Consensus 218 ~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~~~ 293 (372)
+|++|++.........++.|++.. ...++..+++. ++.++||.+.++|.+|+.+.+... +.+..
T Consensus 240 LPlaHi~Er~~~~~~~~~~g~~~~--~~~~~~~~~~d----------l~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~ 307 (613)
T COG1022 240 LPLAHIFERAFEGGLALYGGVTVL--FKEDPRTLLED----------LKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAV 307 (613)
T ss_pred CcHHHHHHHHHHHHHHhhcceEEE--ecCCHHHHHHH----------HHHhCCeEEeechHHHHHHHHHHHHHHHhcchh
Confidence 999999999643333344444444 45688999999 788999999999999998876421 11100
Q ss_pred ------------------------------------HHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCcccccccc
Q 017382 294 ------------------------------------LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGM 337 (372)
Q Consensus 294 ------------------------------------~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~ 337 (372)
+....+....++|++++||+++++++...|+.. |+++.++||+
T Consensus 308 ~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~i~eGYGl 386 (613)
T COG1022 308 RRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIPILEGYGL 386 (613)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCCeEEEecc
Confidence 111223344799999999999999999988765 9999999999
Q ss_pred ccccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 338 TEFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 338 tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
||++++++.......+.+++|+|+|++|+||+|.
T Consensus 387 TEts~~~~v~~~~~~~~gtvG~p~p~~evKI~d~ 420 (613)
T COG1022 387 TETSAVVSVNPPDRFVLGTVGKPLPGIEVKIADD 420 (613)
T ss_pred cccccceEEccccCcccCCcCCcCCCceEEEccC
Confidence 9999888877777889999999999999999984
No 4
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-48 Score=385.98 Aligned_cols=343 Identities=17% Similarity=0.260 Sum_probs=266.6
Q ss_pred HHHHHHHHhCCcCCCceEEEeC-----CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCC--------
Q 017382 2 EVFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG-------- 68 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~g-------- 68 (372)
|+.+.|.++++++|+++|++.. .+++||+|+.++++++|++|.+.. .+|+++|
T Consensus 62 ~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~--------------~~Gv~~g~~~~~~~~ 127 (746)
T PTZ00342 62 HIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYE--------------GKGIPEKKYNEEQNN 127 (746)
T ss_pred hHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHh--------------hcCCCcCcccccccc
Confidence 6889999999999999999862 268999999999999999999610 0288888
Q ss_pred ---CEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC--ccccc
Q 017382 69 ---ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLI 143 (372)
Q Consensus 69 ---d~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~ 143 (372)
|+|+|+++|++||+++++||+++|++++|++++++++++.+++++++++++|++.+..+.+......++. .++.+
T Consensus 128 g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~ 207 (746)
T PTZ00342 128 GKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIIL 207 (746)
T ss_pred ccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEE
Confidence 9999999999999999999999999999999999999999999999999999988777766655444331 22222
Q ss_pred CCCCCC------------------CCC--c---------------------cc--------------cc----------c
Q 017382 144 PPVPNV------------------SSE--T---------------------TV--------------FD----------Q 158 (372)
Q Consensus 144 ~~~~~~------------------~~~--~---------------------~~--------------~~----------~ 158 (372)
+..... ... . .. .. .
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 287 (746)
T PTZ00342 208 DTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDD 287 (746)
T ss_pred CCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHH
Confidence 221000 000 0 00 00 0
Q ss_pred -----cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc--ccCCCCeEEEecCchhHHHHHHHHH
Q 017382 159 -----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALL 231 (372)
Q Consensus 159 -----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~~~~~~~~~~~ 231 (372)
..........++|+++|+|||||||.||||++||+|++..+....... .....|++++++|++|++++.. .+
T Consensus 288 ~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~-~~ 366 (746)
T PTZ00342 288 MTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVI-AY 366 (746)
T ss_pred HHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHH-HH
Confidence 000012234578999999999999999999999999998877654432 2235689999999999999964 66
Q ss_pred HHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhh----ccH---------------
Q 017382 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA----MDT--------------- 292 (372)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----~~~--------------- 292 (372)
.+++.|+++++.+. ++..+++. ++++++|+++++|.++.++.+.... .+.
T Consensus 367 ~~l~~G~~i~~~~~-~~~~l~~d----------i~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~ 435 (746)
T PTZ00342 367 LSFMLGGTINIWSK-DINYFSKD----------IYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKS 435 (746)
T ss_pred HHHHcCCEEEEeCC-CHHHHHHH----------HHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 77999999998875 88888888 7889999999999999999763211 000
Q ss_pred ---------------HHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCCCCCCCCcc
Q 017382 293 ---------------ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTV 357 (372)
Q Consensus 293 ---------------~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~sv 357 (372)
-.........+++|.+++||+++++++.+.|...+|++++++||+||+++..+.......+.+++
T Consensus 436 ~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~~~~~gsv 515 (746)
T PTZ00342 436 NNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHADDNNTESI 515 (746)
T ss_pred hhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCCCCCcccc
Confidence 00111122347999999999999999999999989999999999999976555444445678999
Q ss_pred cccC-CCceEEEee
Q 017382 358 GNPL-PGVQVSMIL 370 (372)
Q Consensus 358 G~p~-~g~~i~Ivd 370 (372)
|+|+ ||+++||+|
T Consensus 516 G~p~~pg~e~ki~d 529 (746)
T PTZ00342 516 GGPISPNTKYKVRT 529 (746)
T ss_pred cCcCCCcEEEEEec
Confidence 9998 999999997
No 5
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.1e-47 Score=381.26 Aligned_cols=341 Identities=24% Similarity=0.301 Sum_probs=269.6
Q ss_pred HHHHHHHHhCCcCCCceEEEe----CC-----ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 017382 2 EVFKAAYKKGSMARDSVAIRA----DQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~----~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (372)
|+.+.+.++++++|+++|+.. ++ +.+||+||.++++++|++|++ +|+++||+|+
T Consensus 45 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~-----------------~Gv~~gd~Va 107 (651)
T PLN02736 45 TLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQ-----------------HGIPKGACVG 107 (651)
T ss_pred CHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEE
Confidence 678899999999999999942 21 469999999999999999999 5999999999
Q ss_pred EEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC-cccc-cCCCCC-C
Q 017382 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSL-IPPVPN-V 149 (372)
Q Consensus 73 l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~-~ 149 (372)
++++|+++|+++++||+++|++++|+++.++.+++.+++++++++++|++.+..+.+.......+. +.++ +..... .
T Consensus 108 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~ 187 (651)
T PLN02736 108 LYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPL 187 (651)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhh
Confidence 999999999999999999999999999999999999999999999999998776665554433321 1111 111000 0
Q ss_pred ---CCC-----cccccc-----cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEE
Q 017382 150 ---SSE-----TTVFDQ-----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLH 216 (372)
Q Consensus 150 ---~~~-----~~~~~~-----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~ 216 (372)
... ....+. ..........++++++|+|||||||.||||++||+++..++......+++.++|++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~ 267 (651)
T PLN02736 188 PSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHIS 267 (651)
T ss_pred hhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEE
Confidence 000 000000 0001122346789999999999999999999999999999888888888999999999
Q ss_pred ecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccH----
Q 017382 217 CLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDT---- 292 (372)
Q Consensus 217 ~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~---- 292 (372)
.+|++|+++++ .++.++..|+++++.+. ++..+++. ++++++|+++++|+++..+.+.....-.
T Consensus 268 ~lPl~h~~~~~-~~~~~l~~G~~i~~~~~-~~~~~~~~----------i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 335 (651)
T PLN02736 268 YLPLAHIYERV-NQIVMLHYGVAVGFYQG-DNLKLMDD----------LAALRPTIFCSVPRLYNRIYDGITNAVKESGG 335 (651)
T ss_pred eCCHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHH----------HHHhCCcEEecchHHHHHHHHHHHHHHhcccH
Confidence 99999999997 57788999999998764 77888888 7889999999999999988764311000
Q ss_pred ------------------------------HHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccc
Q 017382 293 ------------------------------ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVM 342 (372)
Q Consensus 293 ------------------------------~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~ 342 (372)
..........+++|.+++||+++++++.+.+.+.+|++++++||+||+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~ 415 (651)
T PLN02736 336 LKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSC 415 (651)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhch
Confidence 00001111125899999999999999999999889999999999999986
Q ss_pred cccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 343 AISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 343 ~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
.++.......+.+++|+|+||+++||+|.
T Consensus 416 ~~~~~~~~~~~~~~vG~p~pg~~v~i~d~ 444 (651)
T PLN02736 416 VISGMDEGDNLSGHVGSPNPACEVKLVDV 444 (651)
T ss_pred heeccCCCCCCCCccCCccCceEEEEEEc
Confidence 66544444567789999999999999983
No 6
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=8.4e-48 Score=343.07 Aligned_cols=336 Identities=21% Similarity=0.256 Sum_probs=278.2
Q ss_pred HHHHHHHHhCCcCCCceEEEe--CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
|+-+.++..+++.||+.|+++ ++.++||+||.+.++.+|+.|.+ +|+++||+|++..||+.
T Consensus 51 Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~-----------------lGL~kGDrVgvwgpN~~ 113 (596)
T KOG1177|consen 51 TIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLS-----------------LGLKKGDRVGVWGPNSY 113 (596)
T ss_pred cHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHh-----------------hcCCCCCEEEEecCChH
Confidence 577889999999999999997 46789999999999999999999 69999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch-----HHHHHHHHhhcCCcc---c---ccC----
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGAKF---S---LIP---- 144 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~---~---~~~---- 144 (372)
+|+...+||.++|.+.+++||.+...++++.|++.+++++|+.+.+ .+.+.++.+++.... + .++
T Consensus 114 ~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lth 193 (596)
T KOG1177|consen 114 EWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTH 193 (596)
T ss_pred HHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceE
Confidence 9999999999999999999999999999999999999999998743 445555544322110 0 000
Q ss_pred ----C-CCCCCC---Ccccc-cccc------cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccC
Q 017382 145 ----P-VPNVSS---ETTVF-DQSQ------AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT 209 (372)
Q Consensus 145 ----~-~~~~~~---~~~~~-~~~~------~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~ 209 (372)
. ...... ..+.. .... ........|||.+.|.|||||||.|||+.+||.|++++........++.
T Consensus 194 vi~~~ed~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~ 273 (596)
T KOG1177|consen 194 VILADEDHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYN 273 (596)
T ss_pred EEecCCCCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcC
Confidence 0 000000 00000 0000 0113356789999999999999999999999999999999999999999
Q ss_pred CCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc-CCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhh
Q 017382 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM-PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (372)
Q Consensus 210 ~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 288 (372)
..+++++..|++|.+|.....++++..|++++++ +.|++.+.++. |+++++|.++++|+++..+++.
T Consensus 274 e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqa----------i~~ekcT~l~gtPtM~~Dlln~-- 341 (596)
T KOG1177|consen 274 EKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQA----------ISNEKCTTLYGTPTMFVDLLNI-- 341 (596)
T ss_pred cceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHH----------HHhhceEEEecChHHHHHHhcc--
Confidence 9899999999999999888999999999999994 67999999999 8899999999999999999976
Q ss_pred hccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCC-ccccccccccccccccCC---CCCCCCCCcccccCCCc
Q 017382 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNP---LRGARKAGTVGNPLPGV 364 (372)
Q Consensus 289 ~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~-~l~~~YG~tE~~~~~~~~---~~~~~~~~svG~p~~g~ 364 (372)
+....++++++|-.+.||+++++++++.+....+. .+...||+||++.+.+.. .+.+.+..+||+.+++.
T Consensus 342 ------~~~~~~~~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~ 415 (596)
T KOG1177|consen 342 ------PQKQQVDLSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHY 415 (596)
T ss_pred ------hhhccCchhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccc
Confidence 45567799999999999999999999999887654 466799999999665532 22346678999999999
Q ss_pred eEEEeecC
Q 017382 365 QVSMILLL 372 (372)
Q Consensus 365 ~i~Ivd~d 372 (372)
|.+|+|.+
T Consensus 416 Ea~iv~~~ 423 (596)
T KOG1177|consen 416 EAAIVDKD 423 (596)
T ss_pred ccccccCC
Confidence 99999864
No 7
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.7e-47 Score=359.69 Aligned_cols=332 Identities=27% Similarity=0.374 Sum_probs=275.2
Q ss_pred HHhCCcCCCc-eEEEeC---CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHH
Q 017382 8 YKKGSMARDS-VAIRAD---QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVA 83 (372)
Q Consensus 8 ~~~a~~~~~~-~al~~~---~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~ 83 (372)
.+.+..++++ +.+++. ++.+||+|+++++.++|..|.+.+ .|+++||+|++++||++++++
T Consensus 23 ~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~---------------~~i~~gDvV~i~~pNs~~~~~ 87 (537)
T KOG1176|consen 23 GRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELG---------------LGIKKGDVVGILAPNTPEFVE 87 (537)
T ss_pred cccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcC---------------CCCCCCCEEEEEcCCCHHHHH
Confidence 3344344555 666654 499999999999999999999853 258999999999999999999
Q ss_pred HHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcc-------cc
Q 017382 84 GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETT-------VF 156 (372)
Q Consensus 84 ~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 156 (372)
+++||..+|+++.++||.+.+.++.+.++.++++++|++.+..+.+.+....+...++.+........... ..
T Consensus 88 ~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~ 167 (537)
T KOG1176|consen 88 LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFE 167 (537)
T ss_pred HHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchh
Confidence 99999999999999999999999999999999999999999999988877665544444433211100000 10
Q ss_pred cccccc--c-ccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHH
Q 017382 157 DQSQAE--K-MDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (372)
Q Consensus 157 ~~~~~~--~-~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~ 233 (372)
...+.. . ......+|++.|.|||||||.||||++||++++.+.......+.+...|++++.+|++|..|++..+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~ 247 (537)
T KOG1176|consen 168 DLMPEGLPDGIRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSL 247 (537)
T ss_pred hccccCCCcccccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHH
Confidence 000000 0 3344569999999999999999999999999999988888878888899999999999999998766668
Q ss_pred HHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCC
Q 017382 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (372)
Q Consensus 234 l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~ 313 (372)
+..|+++++.+.|++..+++. +++|++|+++++|+++..+++.. ...++++++++.+.+||+
T Consensus 248 ~~~~~~ii~~~~f~~~~~~~~----------i~kykvt~~~~vP~~~~~l~~~p--------~~~~~~l~sl~~v~~gga 309 (537)
T KOG1176|consen 248 LAGGTTIICLRKFDAELFLDL----------IEKYKVTHLFLVPPVLNMLAKSP--------IVKKYDLSSLRSVLSGGA 309 (537)
T ss_pred HhCCceEEECCCCCHHHHHHH----------HHHhCEEEEEcChHHHHHHhcCC--------ccCcccCCccEEEEecCC
Confidence 888899999999999999999 89999999999999999998862 345679999999999999
Q ss_pred CCCHHHHHHHHHHhC-CccccccccccccccccCCCCC-CCCCCcccccCCCceEEEeecC
Q 017382 314 ALPLPVMQQWETITG-HRLLERYGMTEFVMAISNPLRG-ARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 314 ~~~~~~~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~~~-~~~~~svG~p~~g~~i~Ivd~d 372 (372)
++++++.+++.+.++ ..+.++||+||+++.++.+... +.+++++|++++|++++|.+++
T Consensus 310 ~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~ 370 (537)
T KOG1176|consen 310 PLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDET 370 (537)
T ss_pred CCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCccccceEEEeeCCC
Confidence 999999999999998 8999999999999665543333 3589999999999999988753
No 8
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-47 Score=372.47 Aligned_cols=336 Identities=20% Similarity=0.243 Sum_probs=274.8
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.+.++++.+||++|++++++++||+||.++++++|+.|.+ .|+++||+|+++++|++++
T Consensus 50 ~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~-----------------~gi~~gd~V~i~~~n~~~~ 112 (549)
T PRK07788 50 PFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLA-----------------LGVRAGDGVAVLARNHRGF 112 (549)
T ss_pred hHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHHH
Confidence 56788999999999999999999999999999999999999999 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCc-ccccCCCC------CCCCCcc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVP------NVSSETT 154 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~ 154 (372)
+++++||+++|++++|+++.++.+++.+++++++++++|++++..+.+..+....... .+...... .......
T Consensus 113 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (549)
T PRK07788 113 VLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLDD 192 (549)
T ss_pred HHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHHH
Confidence 9999999999999999999999999999999999999999988776665543222211 11100000 0000000
Q ss_pred cccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHH
Q 017382 155 VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPL 234 (372)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l 234 (372)
...... ........++.++++|||||||.||+|.++|+++...+......+++..+|+++...|++|..++. .++.++
T Consensus 193 ~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~-~~~~~l 270 (549)
T PRK07788 193 LIAGSS-TAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWA-HLTLAM 270 (549)
T ss_pred HhcCCC-CCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHH-HHHHHH
Confidence 000000 111123457889999999999999999999999999888888888889999999999999999986 577789
Q ss_pred HcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCC
Q 017382 235 YAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (372)
Q Consensus 235 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~ 314 (372)
..|+++++.+.+++..+++. ++++++|++.++|+++..+++.... .....+++++|.+++||++
T Consensus 271 ~~G~~~v~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~i~~gG~~ 334 (549)
T PRK07788 271 ALGSTVVLRRRFDPEATLED----------IAKHKATALVVVPVMLSRILDLGPE------VLAKYDTSSLKIIFVSGSA 334 (549)
T ss_pred HhCCEEEECCCCCHHHHHHH----------HHHhCCcEEEEHHHHHHHHHhCccc------ccCCCCCCceeEEEEeCCC
Confidence 99999999999999999998 7889999999999999999875321 1133467899999999999
Q ss_pred CCHHHHHHHHHHhCCccccccccccccccccCCCC-CCCCCCcccccCCCceEEEeecC
Q 017382 315 LPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 315 ~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+++++.+.|.+.|+..++|.||+||++.+...... ....++++|+|++|++++|+|++
T Consensus 335 l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~ 393 (549)
T PRK07788 335 LSPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDEN 393 (549)
T ss_pred CCHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCC
Confidence 99999999999999999999999998865543322 23456899999999999999864
No 9
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=9.7e-47 Score=376.10 Aligned_cols=339 Identities=20% Similarity=0.258 Sum_probs=255.5
Q ss_pred HHHHHHHHhCCcCCCceEEEe----CC-----ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 017382 2 EVFKAAYKKGSMARDSVAIRA----DQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~----~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (372)
|+++.+.++++++||++|+.. ++ +++||+||.++++++|++|.+ +|+++||+|+
T Consensus 46 t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~Gd~Va 108 (666)
T PLN02614 46 SCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRS-----------------VGVKDEAKCG 108 (666)
T ss_pred cHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 788999999999999999973 11 358999999999999999999 5999999999
Q ss_pred EEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC--C-cccccCCCCC-
Q 017382 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--A-KFSLIPPVPN- 148 (372)
Q Consensus 73 l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~- 148 (372)
++++|+++|+++++||+++|++++|+++.++++++.+++++++++++|++++....+........ . .++.+.....
T Consensus 109 i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~ 188 (666)
T PLN02614 109 IYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSRE 188 (666)
T ss_pred EEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChH
Confidence 99999999999999999999999999999999999999999999999998765444332211110 1 1111111000
Q ss_pred C------CC--Ccccccc----c-ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc-----ccCC
Q 017382 149 V------SS--ETTVFDQ----S-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW-----EYTS 210 (372)
Q Consensus 149 ~------~~--~~~~~~~----~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~ 210 (372)
. .. .....+. . .........++|+++|+|||||||.||||++||+++...+......+ .+..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 268 (666)
T PLN02614 189 QKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTV 268 (666)
T ss_pred HhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCC
Confidence 0 00 0000000 0 00111234578999999999999999999999999998877655443 5678
Q ss_pred CCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhc
Q 017382 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (372)
Q Consensus 211 ~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~ 290 (372)
+|++++++|++|+++... .+..+..|+++++.+ +++..+++. +++++||+++++|+++..+.+.....
T Consensus 269 ~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~----------i~~~~~T~~~~vP~~~~~l~~~~~~~ 336 (666)
T PLN02614 269 KDVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR-GDVKLLIED----------LGELKPTIFCAVPRVLDRVYSGLQKK 336 (666)
T ss_pred CcEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHH----------HHHhCCeEEEecHHHHHHHHHHHHHH
Confidence 999999999999999864 556688999998875 588889888 78899999999999999887643210
Q ss_pred ----cH---------------------------------HHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHh-CCccc
Q 017382 291 ----DT---------------------------------ELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLL 332 (372)
Q Consensus 291 ----~~---------------------------------~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~l~ 332 (372)
.. ..........+++|.+++||+++++++ +.|.+.+ +++++
T Consensus 337 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~ 415 (666)
T PLN02614 337 LSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVL 415 (666)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEE
Confidence 00 000000111278999999999999875 5666666 58999
Q ss_pred cccccccccccccCCC-CCCCCCCcccccCCCceEEEee
Q 017382 333 ERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 333 ~~YG~tE~~~~~~~~~-~~~~~~~svG~p~~g~~i~Ivd 370 (372)
++||+||++++.+... ....+.+++|+|+||+++||+|
T Consensus 416 ~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d 454 (666)
T PLN02614 416 QGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLES 454 (666)
T ss_pred eeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEee
Confidence 9999999876544322 2224578999999999999998
No 10
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.2e-46 Score=373.61 Aligned_cols=339 Identities=22% Similarity=0.277 Sum_probs=256.1
Q ss_pred HHHHHHHHhCCcCCCceEEEe----C-----CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 017382 2 EVFKAAYKKGSMARDSVAIRA----D-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~----~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (372)
|+++.|.++++++|+++|+.. + .+++||+||.++++++|++|.+ +|+++||+|+
T Consensus 44 t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~gd~Va 106 (660)
T PLN02861 44 SPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRS-----------------RGVNPGDRCG 106 (660)
T ss_pred CHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 678899999999999999963 1 1479999999999999999999 5999999999
Q ss_pred EEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC--C-cccccCCCCCC
Q 017382 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--A-KFSLIPPVPNV 149 (372)
Q Consensus 73 l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~ 149 (372)
|+++|++||+++++||+++|++++|+++.++.+++.+++++++++++|++++..+.+........ . .++.+......
T Consensus 107 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~ 186 (660)
T PLN02861 107 IYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSE 186 (660)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChh
Confidence 99999999999999999999999999999999999999999999999998766554443322211 1 11111111000
Q ss_pred -----C--CC--ccccc----ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc-----cCCC
Q 017382 150 -----S--SE--TTVFD----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-----YTSA 211 (372)
Q Consensus 150 -----~--~~--~~~~~----~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-----~~~~ 211 (372)
. .. ..+.+ .......+...++|+++|+|||||||.||||++||++++..+......+. +..+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~ 266 (660)
T PLN02861 187 QKEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEE 266 (660)
T ss_pred hhhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCC
Confidence 0 00 00000 00001122345789999999999999999999999999988776655443 4678
Q ss_pred CeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhcc
Q 017382 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (372)
Q Consensus 212 d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~ 291 (372)
|++++++|++|++++.. .+.+++.|+++++.+ +++..+++. ++++++|+++++|+++..+.+.....-
T Consensus 267 d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~----------i~~~~~T~~~~vP~~~~~l~~~~~~~~ 334 (660)
T PLN02861 267 DSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-GDIRYLMED----------VQALKPTIFCGVPRVYDRIYTGIMQKI 334 (660)
T ss_pred CEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHH----------HHHhCCcEEeechHHHHHHHHHHHHHH
Confidence 99999999999999865 455799999998874 688888888 888999999999999998875211000
Q ss_pred H-----------------------------HHHHhh--------hhhccCceEEEecCCCCCHHHHHHHHHHhCC-cccc
Q 017382 292 T-----------------------------ELQAAS--------ASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLE 333 (372)
Q Consensus 292 ~-----------------------------~~~~~~--------~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~-~l~~ 333 (372)
. ..+... ....+++|.+++||+++++++. .|.+.++. .+++
T Consensus 335 ~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~ 413 (660)
T PLN02861 335 SSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQ 413 (660)
T ss_pred hccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeE
Confidence 0 000011 1112689999999999999975 46666764 7999
Q ss_pred ccccccccccccCC-CCCCCCCCcccccCCCceEEEee
Q 017382 334 RYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 334 ~YG~tE~~~~~~~~-~~~~~~~~svG~p~~g~~i~Ivd 370 (372)
+||+||+++.++.. .....+.+++|+|+||+++||+|
T Consensus 414 ~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d 451 (660)
T PLN02861 414 GYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLES 451 (660)
T ss_pred ecchhhhhhceeecccccCCCCCCccCccCceEEEEEE
Confidence 99999987655432 22223568999999999999998
No 11
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=5.2e-47 Score=359.71 Aligned_cols=333 Identities=29% Similarity=0.443 Sum_probs=257.8
Q ss_pred HHHhCCcCCCceEEEe-CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHH
Q 017382 7 AYKKGSMARDSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (372)
Q Consensus 7 l~~~a~~~~~~~al~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~ 85 (372)
|+++|+++||++|+++ .++++||+||.++++++|..|++ +|+++||+|+++++|++++++++
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~-----------------~g~~~~~~V~i~~~n~~~~~~~~ 63 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRK-----------------LGVKKGDRVAILLPNSIEFVVAF 63 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHH-----------------TTSSTTSEEEEEESSSHHHHHHH
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHH-----------------hCCCccccccccCCccceeeeee
Confidence 6789999999999999 99999999999999999999998 59999999999999999999999
Q ss_pred HHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEe----ccchHHHHHHHHhhcC--CcccccCCCCCCCCCccccccc
Q 017382 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLS----TEDYREVLQNVASKSG--AKFSLIPPVPNVSSETTVFDQS 159 (372)
Q Consensus 86 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 159 (372)
+||+++|++++|++|.++.+++.+++++++++++|+ +......+........ .....+................
T Consensus 64 ~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (417)
T PF00501_consen 64 LACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASL 143 (417)
T ss_dssp HHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999999997 2222223333332211 1122222111111000000000
Q ss_pred ccccccC-CCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHH--hhcccCCCCeEEEecCchhHHHHHHHHHHHHHc
Q 017382 160 QAEKMDG-QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT--EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYA 236 (372)
Q Consensus 160 ~~~~~~~-~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~--~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~ 236 (372)
....... ..++++++++|||||||.||+|.++|+++++.+.... ..++++ |++++.+|++|..+++..++.++..
T Consensus 144 ~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~ 221 (417)
T PF00501_consen 144 SDEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFS 221 (417)
T ss_dssp CHCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHC
T ss_pred ccccccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccccc
Confidence 0000000 0568999999999999999999999999999888764 222333 6999999999999996679999999
Q ss_pred CceEEEcCCCch---hHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCC
Q 017382 237 GATVEFMPKFSV---RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (372)
Q Consensus 237 G~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~ 313 (372)
|+++++.+.... +.+++. ++++++|++.++|+++..+++.... . ......+++++|.+++||+
T Consensus 222 G~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~l~~l~~~~~~-~---~~~~~~~l~~lr~v~~~G~ 287 (417)
T PF00501_consen 222 GATLVLPSPFDLFDPESLLEL----------ISRYKPTILFAVPSMLEALLQSPEE-K---TKISKKDLSSLRTVISGGE 287 (417)
T ss_dssp TSEEEEESSHHHHHHHHHHHH----------HHHHTESEEEEEHHHHHHHHHHHHT-T---HHGTTTTGTT-SEEEEESS
T ss_pred cccccccccccccccccchhc----------ccccccccccccccccccccccccc-c---ccccccccccccccccccc
Confidence 999999997654 556677 7889999999999999999874211 0 0112347889999999999
Q ss_pred CCCHHHHHHHHHHhCC-ccccccccccccccccCC--CCCCCCCCcccccCCCceEEEeecC
Q 017382 314 ALPLPVMQQWETITGH-RLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 314 ~~~~~~~~~~~~~~~~-~l~~~YG~tE~~~~~~~~--~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
++++++.+++++.++. ++++.||+||++.+++.. .....+.+++|+|+||++++|+|++
T Consensus 288 ~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~ 349 (417)
T PF00501_consen 288 PLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPN 349 (417)
T ss_dssp T-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTT
T ss_pred cCChhhccccccccccccceecccccccceeeeccccccccccccccccccccccccccccc
Confidence 9999999999999987 999999999999887643 3334577899999999999999974
No 12
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=6.9e-46 Score=368.12 Aligned_cols=338 Identities=20% Similarity=0.280 Sum_probs=261.6
Q ss_pred HHHHHHHHhCCcCCCceEEEeC-----CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcC
Q 017382 2 EVFKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~-----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~ 76 (372)
|+.+.|.++++++|+++|+++. .+++||+||.++++++|+.|.+ .|+++||+|+++++
T Consensus 40 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-----------------~Gv~~gd~Vai~~~ 102 (614)
T PRK08180 40 RLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLD-----------------RGLSAERPLMILSG 102 (614)
T ss_pred cHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEecC
Confidence 6788999999999999999864 2689999999999999999999 49999999999999
Q ss_pred CCHhHHHHHHHHHhhCceeeeCCCCCC-----HHHHHHHHhhCCceEEEeccc--hHHHHHHHHhhcCCcccccCCCCCC
Q 017382 77 PSFEFVAGVLGTWFSGCIAVPLALSYP-----ESELLHVMHDSDISMVLSTED--YREVLQNVASKSGAKFSLIPPVPNV 149 (372)
Q Consensus 77 n~~~~~~~~~A~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (372)
|+++++++++||+++|++++|+++.++ .+++.+++++++++++|+++. ....+..... .....+........
T Consensus 103 n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~ 181 (614)
T PRK08180 103 NSIEHALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP-ADVEVVAVRGAVPG 181 (614)
T ss_pred CCHHHHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc-CCceEEEecCCCCC
Confidence 999999999999999999999999988 789999999999999999853 2222222111 11111111110000
Q ss_pred ---CCCcccccccc----cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccC--CCCeEEEecCc
Q 017382 150 ---SSETTVFDQSQ----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT--SADQFLHCLPL 220 (372)
Q Consensus 150 ---~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~--~~d~~l~~~pl 220 (372)
........... ........++++++|+|||||||.||||++||+++..++......+... ..+++++++|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl 261 (614)
T PRK08180 182 RAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPW 261 (614)
T ss_pred cccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecch
Confidence 00000000000 0111234578999999999999999999999999998888777766653 56899999999
Q ss_pred hhHHHHHHHHHHHHHcCceEEEcCC-Cchh---HHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHH
Q 017382 221 HHVHGLFNALLAPLYAGATVEFMPK-FSVR---GIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296 (372)
Q Consensus 221 ~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~---~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~ 296 (372)
+|.+++...++.+++.|+++++.+. +++. .+++. ++++++|+++++|+++..|++.+... ..
T Consensus 262 ~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~----------i~~~~~t~~~~vP~~~~~l~~~~~~~----~~ 327 (614)
T PRK08180 262 NHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRN----------LREISPTVYFNVPKGWEMLVPALERD----AA 327 (614)
T ss_pred HHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHH----------HHHhCCcEEechHHHHHHHHHHHHhc----hh
Confidence 9999987778889999999999763 4544 44455 78899999999999999998754321 12
Q ss_pred hhhhhccCceEEEecCCCCCHHHHHHHHHH----hC--CccccccccccccccccCCCCCCCCCCcccccCCCceEEEee
Q 017382 297 ASASAAKQLRLMMCGSSALPLPVMQQWETI----TG--HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 297 ~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~----~~--~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd 370 (372)
....+++++|.+++||+++++++.+.|.+. +| +++++.||+||++.+++.......+.+++|+|+||+++||+|
T Consensus 328 ~~~~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~d 407 (614)
T PRK08180 328 LRRRFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGPLSRAGNIGLPAPGCEVKLVP 407 (614)
T ss_pred hhhhhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccccCCCCcccCccCCcEEEEec
Confidence 234567999999999999999999999875 34 679999999999866553333345678999999999999998
Q ss_pred c
Q 017382 371 L 371 (372)
Q Consensus 371 ~ 371 (372)
.
T Consensus 408 ~ 408 (614)
T PRK08180 408 V 408 (614)
T ss_pred C
Confidence 5
No 13
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.3e-46 Score=364.78 Aligned_cols=337 Identities=24% Similarity=0.331 Sum_probs=278.3
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+|+++.|.++++.+|+++|+++.++++||+||.+++.++|+.|.+. +|+++||+|+++++|+++
T Consensus 10 ~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~----------------~g~~~g~~V~i~~~~~~~ 73 (546)
T PRK08314 10 TSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQE----------------CGVRKGDRVLLYMQNSPQ 73 (546)
T ss_pred CCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEECCCChH
Confidence 4788999999999999999999999999999999999999999983 399999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCC-------CC---
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-------VS--- 150 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--- 150 (372)
++++++||+++|++++|+++.++.+++.++++++++++++++++..+.+.............+..... ..
T Consensus 74 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (546)
T PRK08314 74 FVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPA 153 (546)
T ss_pred HHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCccc
Confidence 99999999999999999999999999999999999999999988776665543322111111100000 00
Q ss_pred -----------------CCcccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCe
Q 017382 151 -----------------SETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQ 213 (372)
Q Consensus 151 -----------------~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~ 213 (372)
..................++++++|+|||||||.||+|.++|++++.++......+.+..+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~ 233 (546)
T PRK08314 154 WLRAEPPLQALAPGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESV 233 (546)
T ss_pred ccccccccccccccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCce
Confidence 000000000011123345789999999999999999999999999999888888888999999
Q ss_pred EEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHH
Q 017382 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTE 293 (372)
Q Consensus 214 ~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 293 (372)
+++.+|++|..|++..++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+...
T Consensus 234 ~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~ll~~~~----- 298 (546)
T PRK08314 234 VLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARL----------IERYRVTHWTNIPTMVVDFLASPG----- 298 (546)
T ss_pred EEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHH----------HHHhcCceecccHHHHHHHHhCCC-----
Confidence 99999999999998788899999999999999999999888 788999999999999998876421
Q ss_pred HHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 294 LQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 294 ~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
....+++++|.+++||++++++++++|.+.++.++++.||+||++.............+++|+|++|++++|+|+
T Consensus 299 ---~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~ 373 (546)
T PRK08314 299 ---LAERDLSSLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPDRPKLQCLGIPTFGVDARVIDP 373 (546)
T ss_pred ---ccccCchhhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccceecCCCcCCCCCccCcccCCeEEEEEeC
Confidence 223467889999999999999999999999999999999999998765544333345688999999999999985
No 14
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=8.7e-46 Score=364.20 Aligned_cols=337 Identities=21% Similarity=0.290 Sum_probs=268.2
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
|+.+.|.++++++|+++|++++++.+||+||.++++++|+.|.+ +|+++||+|+++++|++++
T Consensus 8 ~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-----------------~Gv~~gd~V~v~~~n~~~~ 70 (563)
T PLN02860 8 HICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLR-----------------LGLRNGDVVAIAALNSDLY 70 (563)
T ss_pred HHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCCHHH
Confidence 68899999999999999999989999999999999999999999 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHh-hcCC-c-ccccCCCC--------CCC
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS-KSGA-K-FSLIPPVP--------NVS 150 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~--------~~~ 150 (372)
+++++||+++|++++|+++.++.+++.++++++++++++++++.......... .... . .+...... ...
T Consensus 71 ~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (563)
T PLN02860 71 LEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFL 150 (563)
T ss_pred HHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchhhcc
Confidence 99999999999999999999999999999999999999998765333332211 1110 1 11111000 000
Q ss_pred CCcccccc--cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH
Q 017382 151 SETTVFDQ--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (372)
Q Consensus 151 ~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~ 228 (372)
........ ..........++++++|+|||||||.||+|.++|+++..+.......+++.++|+++...|++|..++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~- 229 (563)
T PLN02860 151 TTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLS- 229 (563)
T ss_pred ccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHH-
Confidence 00000000 000111233568999999999999999999999999988777777778889999999999999999985
Q ss_pred HHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEE
Q 017382 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (372)
Q Consensus 229 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v 308 (372)
.++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+.... ......++++|.+
T Consensus 230 ~~~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~~ 293 (563)
T PLN02860 230 SALAMLMVGACHVLLPKFDAKAALQA----------IKQHNVTSMITVPAMMADLISLTRK------SMTWKVFPSVRKI 293 (563)
T ss_pred HHHHHHHcCceEEecCCCCHHHHHHH----------HHHhCCeeEEeChHHHHHHHHhhhh------hhccccccceeEE
Confidence 57888999999999999999999988 8899999999999999999875321 1122467899999
Q ss_pred EecCCCCCHHHHHHHHHHh-CCccccccccccccccccCCC--C---------------------CCCCCCcccccCCCc
Q 017382 309 MCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL--R---------------------GARKAGTVGNPLPGV 364 (372)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~--~---------------------~~~~~~svG~p~~g~ 364 (372)
++||+++++++.+.|.+.| +.++++.||+||++..++... . ......++|+|+||+
T Consensus 294 ~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~ 373 (563)
T PLN02860 294 LNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV 373 (563)
T ss_pred EeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc
Confidence 9999999999999999998 789999999999875443211 0 011234799999999
Q ss_pred eEEEeecC
Q 017382 365 QVSMILLL 372 (372)
Q Consensus 365 ~i~Ivd~d 372 (372)
+++|+|.+
T Consensus 374 ~v~i~~~~ 381 (563)
T PLN02860 374 ELKIGLDE 381 (563)
T ss_pred EEEEecCC
Confidence 99998754
No 15
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=5.3e-46 Score=363.50 Aligned_cols=333 Identities=20% Similarity=0.243 Sum_probs=268.0
Q ss_pred HHHHHHHHhCCcCCCceEEEeCC-ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~-~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
++.+.|.+.++++|+++|+.++. +++||+||.++++++|+.|.+ .+||+|+++++|+++
T Consensus 20 ~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~--------------------~~gd~Val~~~n~~e 79 (539)
T PRK06334 20 TVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK--------------------YPDQHIGIMMPASAG 79 (539)
T ss_pred cHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh--------------------ccCCeEEEEcCCchH
Confidence 67889999999999999998765 799999999999999999976 279999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhh---cCCcccccCCCCCC---CCCcc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASK---SGAKFSLIPPVPNV---SSETT 154 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~ 154 (372)
++++++||+++|++++|+++.++.+++.++++++++++++++.+..+.+.+.... ....++.+...... .....
T Consensus 80 ~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 159 (539)
T PRK06334 80 AYIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEKCR 159 (539)
T ss_pred HHHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHhhh
Confidence 9999999999999999999999999999999999999999998776655543321 11111111110000 00000
Q ss_pred cc---cccc-----cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHH
Q 017382 155 VF---DQSQ-----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226 (372)
Q Consensus 155 ~~---~~~~-----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~ 226 (372)
.. .... ........++++++|+|||||||.||+|++||+++..+.......++++.+|++++.+|++|.+++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~ 239 (539)
T PRK06334 160 IGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGF 239 (539)
T ss_pred hhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhh
Confidence 00 0000 001123467899999999999999999999999999888887778888999999999999999998
Q ss_pred HHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCc
Q 017382 227 FNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQL 305 (372)
Q Consensus 227 ~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~l 305 (372)
...++.++..|+++++.+ .+++..+++. ++++++|++.++|+++..+++... ....+++++
T Consensus 240 ~~~~~~~l~~G~~vv~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l 301 (539)
T PRK06334 240 NSCTLFPLLSGVPVVFAYNPLYPKKIVEM----------IDEAKVTFLGSTPVFFDYILKTAK--------KQESCLPSL 301 (539)
T ss_pred HHHHHHHHHcCCeEEEecCCCCHHHHHHH----------HHHhCCcEEEecHHHHHHHHHhhh--------hcccccccc
Confidence 766788899999999875 4789999988 788999999999999999987521 223467899
Q ss_pred eEEEecCCCCCHHHHHHHHHHh-CCccccccccccccccccCCC-CCCCCCCcccccCCCceEEEeecC
Q 017382 306 RLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 306 r~v~~gG~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~-~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
|.+++||+++++++.+++.+.+ +..+++.||+||++.+++... ......+++|+|++|++++|+|.|
T Consensus 302 r~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~ 370 (539)
T PRK06334 302 RFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEE 370 (539)
T ss_pred cEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCC
Confidence 9999999999999999999988 689999999999986655332 223345789999999999999853
No 16
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.3e-45 Score=368.44 Aligned_cols=336 Identities=18% Similarity=0.242 Sum_probs=261.7
Q ss_pred HHHHHHhCC-cCCCceEEEeC------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcC
Q 017382 4 FKAAYKKGS-MARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (372)
Q Consensus 4 ~~~l~~~a~-~~~~~~al~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~ 76 (372)
++.+.+++. .+|+++|+++. .+++||+||.+++.++|+.|++ .|+++||+|+++++
T Consensus 91 ~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrV~i~~p 153 (666)
T PLN02654 91 YNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKD-----------------VGVKKGDAVVIYLP 153 (666)
T ss_pred HHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 345556765 48999999873 3689999999999999999999 59999999999999
Q ss_pred CCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHH---------HHHHHHhhcC---C--c-cc
Q 017382 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE---------VLQNVASKSG---A--K-FS 141 (372)
Q Consensus 77 n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~~~~~~---~--~-~~ 141 (372)
|+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.... .+........ . . ..
T Consensus 154 n~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (666)
T PLN02654 154 MLMELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICL 233 (666)
T ss_pred CCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEE
Confidence 999999999999999999999999999999999999999999999875421 2222111110 0 0 00
Q ss_pred ccCCCCC-------CCCC-----cccccccc-cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHH-HHHHHhhcc
Q 017382 142 LIPPVPN-------VSSE-----TTVFDQSQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQ-VQMLTEAWE 207 (372)
Q Consensus 142 ~~~~~~~-------~~~~-----~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~-~~~~~~~~~ 207 (372)
....... .... ........ ........++++++|+|||||||.||||+++|.+++.. .......++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~ 313 (666)
T PLN02654 234 TYENQLAMKREDTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFD 313 (666)
T ss_pred EecccccccccccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcC
Confidence 0010000 0000 00000000 00112246789999999999999999999999998643 445566778
Q ss_pred cCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 208 YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 208 ~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
++++|++++..|++|+.+....++.+|+.|+++++.++ +++..+++. ++++++|+++++|++++.|
T Consensus 314 ~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l 383 (666)
T PLN02654 314 YKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDI----------VDKYKVTIFYTAPTLVRSL 383 (666)
T ss_pred CCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHH
Confidence 99999999999999999987778899999999999874 478899988 8899999999999999999
Q ss_pred HHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhC---CccccccccccccccccCCCC--CCCCCCccc
Q 017382 284 IQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEFVMAISNPLR--GARKAGTVG 358 (372)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~---~~l~~~YG~tE~~~~~~~~~~--~~~~~~svG 358 (372)
.+.... .....++++||.++++|+++++++++++.+.+| +++.+.||+||+++..+.+.. ...+++++|
T Consensus 384 ~~~~~~------~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G 457 (666)
T PLN02654 384 MRDGDE------YVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSAT 457 (666)
T ss_pred HhhCcc------ccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccC
Confidence 875211 123457899999999999999999999999997 689999999999866553322 235678999
Q ss_pred ccCCCceEEEeecC
Q 017382 359 NPLPGVQVSMILLL 372 (372)
Q Consensus 359 ~p~~g~~i~Ivd~d 372 (372)
+|+||++++|+|.+
T Consensus 458 ~p~~g~~v~i~d~~ 471 (666)
T PLN02654 458 FPFFGVQPVIVDEK 471 (666)
T ss_pred CCCCCceEEEECCC
Confidence 99999999999864
No 17
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=2.1e-45 Score=368.22 Aligned_cols=341 Identities=21% Similarity=0.282 Sum_probs=258.6
Q ss_pred HHHHHHHHhCCcCCCceEEEe------------CC-----------ceeeHHHHHHHHHHHHHHHhhCCCCccccccccc
Q 017382 2 EVFKAAYKKGSMARDSVAIRA------------DQ-----------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNE 58 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~------------~~-----------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~ 58 (372)
|+.+.|.+.++.+||++|+.. ++ +.+||+|+.++++++|+.|.+
T Consensus 59 t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~------------- 125 (696)
T PLN02387 59 TLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVA------------- 125 (696)
T ss_pred CHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHH-------------
Confidence 678999999999999999942 12 348999999999999999999
Q ss_pred ccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC
Q 017382 59 NSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA 138 (372)
Q Consensus 59 ~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~ 138 (372)
+|+++||+|+++++|++||+++++||+++|++++|+++.++++++.+++++++++++|++.+..+.+.........
T Consensus 126 ----lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~ 201 (696)
T PLN02387 126 ----LGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLET 201 (696)
T ss_pred ----hCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCC
Confidence 5999999999999999999999999999999999999999999999999999999999998777666655443321
Q ss_pred --cccccCCCCCCCC-------C---ccccc-----ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHH
Q 017382 139 --KFSLIPPVPNVSS-------E---TTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM 201 (372)
Q Consensus 139 --~~~~~~~~~~~~~-------~---~~~~~-----~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~ 201 (372)
.++.++....... . ..+.+ ...........++|+++|+|||||||.||||++||++++.++..
T Consensus 202 l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~ 281 (696)
T PLN02387 202 VKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAG 281 (696)
T ss_pred ceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHH
Confidence 1222221110000 0 00000 00001112345799999999999999999999999999988877
Q ss_pred HHhhc-ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCc--------hhHHHHHHHhhCCCCCCCCCcceeE
Q 017382 202 LTEAW-EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFS--------VRGIWQRWRESYPVNGNRAGEAITA 272 (372)
Q Consensus 202 ~~~~~-~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~~~~~~~~~~~i~~~~~t~ 272 (372)
....+ .+.++|++++++|++|++++.. ....+..|+++.+..... +...++. ++++++|+
T Consensus 282 ~~~~~~~~~~~d~~l~~lPl~Hi~~~~~-~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~----------i~~~~pT~ 350 (696)
T PLN02387 282 VMTVVPKLGKNDVYLAYLPLAHILELAA-ESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGD----------ASALKPTL 350 (696)
T ss_pred HHhhcCCCCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEECChhhhcccccccccCchhh----------HHHhCCcE
Confidence 66554 5788999999999999999864 444577888877654321 1122333 77899999
Q ss_pred eecchHHHHHHHHhhhhccH---------------------------------------HHHHhhhhhccCceEEEecCC
Q 017382 273 FTGVPTMYTRLIQGYEAMDT---------------------------------------ELQAASASAAKQLRLMMCGSS 313 (372)
Q Consensus 273 ~~~~p~~~~~l~~~~~~~~~---------------------------------------~~~~~~~~~l~~lr~v~~gG~ 313 (372)
+.++|.++.++.+....... ..........+++|.+++||+
T Consensus 351 ~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGa 430 (696)
T PLN02387 351 MTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGA 430 (696)
T ss_pred EEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCC
Confidence 99999999998765321000 000011112268999999999
Q ss_pred CCCHHHHHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEee
Q 017382 314 ALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 314 ~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd 370 (372)
++++++.+.++..+|++++++||+||+++.++.....+...+++|+|+|++++||+|
T Consensus 431 pl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~~~~gsvG~p~p~~evkivd 487 (696)
T PLN02387 431 PLSGDTQRFINICLGAPIGQGYGLTETCAGATFSEWDDTSVGRVGPPLPCCYVKLVS 487 (696)
T ss_pred CCCHHHHHHHHHHcCCCeeEeechhhcccceeecCcccCCCCccCCCCCceEEEEee
Confidence 999999888887789999999999999866554333345678999999999999998
No 18
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.5e-45 Score=364.02 Aligned_cols=335 Identities=19% Similarity=0.211 Sum_probs=261.1
Q ss_pred HHHHHHhCCcCCCceEEEe------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCC
Q 017382 4 FKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (372)
Q Consensus 4 ~~~l~~~a~~~~~~~al~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n 77 (372)
++.+.++++.+|+++|+++ ..+++||+||.++++++|+.|++ +|+++||+|+++++|
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~Gd~V~i~~~n 117 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRA-----------------LGVGRGDRVLIYMPM 117 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCC
Confidence 4567788888999999997 24689999999999999999999 599999999999999
Q ss_pred CHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch---------HHHHHHHHhhc---CCcccccCC
Q 017382 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKS---GAKFSLIPP 145 (372)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~---~~~~~~~~~ 145 (372)
+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+....... ...++.+..
T Consensus 118 ~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 197 (628)
T TIGR02316 118 IAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDR 197 (628)
T ss_pred CHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998642 22233222211 112222221
Q ss_pred CCC-CC--C--Ccccc---cccc--cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHH-HHHHHhhcccCCCCeE
Q 017382 146 VPN-VS--S--ETTVF---DQSQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQ-VQMLTEAWEYTSADQF 214 (372)
Q Consensus 146 ~~~-~~--~--~~~~~---~~~~--~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~-~~~~~~~~~~~~~d~~ 214 (372)
... .. . ..... .... ........++++++|+|||||||.||||+++|.++... .......++++++|++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~ 277 (628)
T TIGR02316 198 GLAPMRLIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVM 277 (628)
T ss_pred CCCCcCcccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEE
Confidence 100 00 0 00000 0000 00111235789999999999999999999999998644 3445556788999999
Q ss_pred EEecCchhHHHHHHHHHHHHHcCceEEEcCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhc
Q 017382 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (372)
Q Consensus 215 l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~ 290 (372)
++..|++|+.+....++.+|+.|+++++.+. +++..+++. ++++++|+++++|++++.+.+....
T Consensus 278 ~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~- 346 (628)
T TIGR02316 278 FSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSI----------VERYGVRTMFSAPTAIRVLKKQDAA- 346 (628)
T ss_pred EEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHhcCCc-
Confidence 9999999999876678899999999999874 467888888 8889999999999999988764211
Q ss_pred cHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCC----CCCCCCcccccCCCceE
Q 017382 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR----GARKAGTVGNPLPGVQV 366 (372)
Q Consensus 291 ~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~----~~~~~~svG~p~~g~~i 366 (372)
.....++++||.+++||+++++++.+++.+.+|..+++.||+||++..++.... ...+.+++|+|+||+++
T Consensus 347 -----~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v 421 (628)
T TIGR02316 347 -----WLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHL 421 (628)
T ss_pred -----ccccCCccceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceE
Confidence 123457899999999999999999999999899999999999999854332111 12456899999999999
Q ss_pred EEeec
Q 017382 367 SMILL 371 (372)
Q Consensus 367 ~Ivd~ 371 (372)
+|+|.
T Consensus 422 ~i~d~ 426 (628)
T TIGR02316 422 RVLDE 426 (628)
T ss_pred EEEEC
Confidence 99996
No 19
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-45 Score=358.61 Aligned_cols=336 Identities=16% Similarity=0.211 Sum_probs=273.1
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.|.++++++||++|++++++++||+||.++++++|++|.+ .|+++||+|+++++|++++
T Consensus 44 ~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~-----------------~g~~~g~~V~i~~~n~~~~ 106 (537)
T PRK13382 44 GPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQA-----------------LPIGEPRVVGIMCRNHRGF 106 (537)
T ss_pred CHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEecCcHHH
Confidence 57788999999999999999999999999999999999999998 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC--cccccCCCCCCCCCccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVSSETTVFDQS 159 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 159 (372)
++.++|++++|++++|+++.++.+++.+++++++++++|++.+....+......... ....+...............
T Consensus 107 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 185 (537)
T PRK13382 107 VEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIAA- 185 (537)
T ss_pred HHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhhc-
Confidence 999999999999999999999999999999999999999998776655443221111 11111110000000000000
Q ss_pred ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCce
Q 017382 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (372)
Q Consensus 160 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~ 239 (372)
.........+++.++++|||||||.||+|+++|+++..........+.+..+++++...|++|..++. .++.++..|++
T Consensus 186 ~~~~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~-~~~~~l~~g~~ 264 (537)
T PRK13382 186 HAGQRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFS-QLVLAASLACT 264 (537)
T ss_pred cCcCCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHH-HHHHHHhcCcE
Confidence 00011123467899999999999999999999999988888777777888999999999999999985 67888999999
Q ss_pred EEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHH
Q 017382 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (372)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~ 319 (372)
+++.+.+++..+++. ++++++|++.++|+++..+.+.... .....+++++|.+++||+++++++
T Consensus 265 ~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~i~~gG~~l~~~~ 328 (537)
T PRK13382 265 IVTRRRFDPEATLDL----------IDRHRATGLAVVPVMFDRIMDLPAE------VRNRYSGRSLRFAAASGSRMRPDV 328 (537)
T ss_pred EEECCCcCHHHHHHH----------HHHhCCEEEEehHHHHHHHHcCCch------hcccCCccceeEEEEcCCCCCHHH
Confidence 999999999999998 7889999999999999998764211 112345678999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccccCCCC-CCCCCCcccccCCCceEEEeecC
Q 017382 320 MQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 320 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
++.|.+.+|.++++.||+||++.+++.... .....+++|+|++|++++|+|.+
T Consensus 329 ~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~ 382 (537)
T PRK13382 329 VIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQD 382 (537)
T ss_pred HHHHHHHcCCcEEecccccccCcceecChhHhccCCCCccccCcCcEEEEECCC
Confidence 999999999999999999999876653322 23456899999999999999864
No 20
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.8e-45 Score=363.64 Aligned_cols=332 Identities=24% Similarity=0.348 Sum_probs=264.5
Q ss_pred HHHHHHHHhCCcCCCceEEEe--------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEE
Q 017382 2 EVFKAAYKKGSMARDSVAIRA--------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGI 73 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~--------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l 73 (372)
|+++.|.++++.+|+++|+++ ..+++||+||.+++.++|+.|++ +|+++||+|++
T Consensus 26 t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~-----------------~Gi~~gd~V~i 88 (632)
T PRK07529 26 STYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHS-----------------LGVGPGDVVAF 88 (632)
T ss_pred CHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEE
Confidence 688999999999999999986 35799999999999999999999 59999999999
Q ss_pred EcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch-----HHHHHHHHhhcCC-c-ccccCCC
Q 017382 74 VAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGA-K-FSLIPPV 146 (372)
Q Consensus 74 ~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~-~-~~~~~~~ 146 (372)
+++|++++++++|||+++| +++|+++.++++++.+++++++++++|++..+ .+.+......... + ++.+...
T Consensus 89 ~~~n~~e~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 167 (632)
T PRK07529 89 LLPNLPETHFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLA 167 (632)
T ss_pred ECCCCHHHHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCc
Confidence 9999999999999999999 57999999999999999999999999997543 2333333222211 1 1111111
Q ss_pred CCC-------------------CCCcccccccc-c--ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHh
Q 017382 147 PNV-------------------SSETTVFDQSQ-A--EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE 204 (372)
Q Consensus 147 ~~~-------------------~~~~~~~~~~~-~--~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~ 204 (372)
... ........... . .......++++++++|||||||.||+|.+||++++.++.....
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~ 247 (632)
T PRK07529 168 RYLPGPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL 247 (632)
T ss_pred ccccccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH
Confidence 000 00000000000 0 0112235689999999999999999999999999998888777
Q ss_pred hcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC--Cc----hhHHHHHHHhhCCCCCCCCCcceeEeecchH
Q 017382 205 AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK--FS----VRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (372)
Q Consensus 205 ~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~--~~----~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 278 (372)
.+.+.++|++++.+|++|..+....++.++..|+++++.++ +. ...+++. ++++++|++.++|+
T Consensus 248 ~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~ 317 (632)
T PRK07529 248 LLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKI----------VERYRINFLSGVPT 317 (632)
T ss_pred hcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHH----------HHHhCCeEEEeHHH
Confidence 88889999999999999999988788999999999999864 21 2456666 78899999999999
Q ss_pred HHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCC-CCCCCCCcc
Q 017382 279 MYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTV 357 (372)
Q Consensus 279 ~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~sv 357 (372)
++..+++.. ....+++++|.+++||+++++++.++|++.+|+++++.||+||++.+++... ....+.+++
T Consensus 318 ~~~~l~~~~---------~~~~~~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~~sv 388 (632)
T PRK07529 318 VYAALLQVP---------VDGHDISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPDGERRIGSV 388 (632)
T ss_pred HHHHHHhCc---------ccCCCccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCccccccCCCc
Confidence 999998752 1234678999999999999999999999999999999999999986655433 234467899
Q ss_pred cccCCCceEEEee
Q 017382 358 GNPLPGVQVSMIL 370 (372)
Q Consensus 358 G~p~~g~~i~Ivd 370 (372)
|+|+|+++++|++
T Consensus 389 G~~~p~~~v~i~~ 401 (632)
T PRK07529 389 GLRLPYQRVRVVI 401 (632)
T ss_pred ccccCCceEEEEE
Confidence 9999999999964
No 21
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-45 Score=366.50 Aligned_cols=345 Identities=21% Similarity=0.303 Sum_probs=257.8
Q ss_pred HHHHHHHHhCCcCCCceEEEeC---------------------------CceeeHHHHHHHHHHHHHHHhhCCCCccccc
Q 017382 2 EVFKAAYKKGSMARDSVAIRAD---------------------------QKSYSYDQLASSALRISSLLCSNDLKTTSEK 54 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~---------------------------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~ 54 (372)
|+++.|.++++.+||++|+... .+++||+||.++++++|+.|.+
T Consensus 70 t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~--------- 140 (700)
T PTZ00216 70 NFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAE--------- 140 (700)
T ss_pred CHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHH---------
Confidence 6889999999999999999862 4789999999999999999999
Q ss_pred ccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHh
Q 017382 55 TKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (372)
Q Consensus 55 ~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (372)
+|+++||+|+|+++|++||+++++||+++|++++|+++.++++++.+++++++++++|++....+.+.....
T Consensus 141 --------~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~ 212 (700)
T PTZ00216 141 --------LGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMK 212 (700)
T ss_pred --------hCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhh
Confidence 599999999999999999999999999999999999999999999999999999999998765544433222
Q ss_pred h--cC-CcccccCCCCCCCCCc-----ccc--------cccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHH
Q 017382 135 K--SG-AKFSLIPPVPNVSSET-----TVF--------DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQ 198 (372)
Q Consensus 135 ~--~~-~~~~~~~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~ 198 (372)
. .. ..++.+.......... ... ............++++++|+|||||||.||||++||+++++.
T Consensus 213 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~ 292 (700)
T PTZ00216 213 SGGMPNTTIIYLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAG 292 (700)
T ss_pred hccCCceEEEEECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHH
Confidence 1 11 1222222111000000 000 000011122345789999999999999999999999999988
Q ss_pred HHHHHhhc-----ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEe
Q 017382 199 VQMLTEAW-----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAF 273 (372)
Q Consensus 199 ~~~~~~~~-----~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~ 273 (372)
+......+ .+.++|++++++|++|+++... ....+..|+++++. ++..+.+.+... ...++++++|++
T Consensus 293 ~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~---~~~~l~~~~~~~---~~~l~~~~pT~~ 365 (700)
T PTZ00216 293 ILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG---SPRTLTDTFARP---HGDLTEFRPVFL 365 (700)
T ss_pred HHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC---CHHHhhhhhccc---cchHHHcCCcEE
Confidence 77765443 2467899999999999998854 45557888887763 344544432110 011678999999
Q ss_pred ecchHHHHHHHHhhhhccHH---------------------------------HHHhhhhhccCceEEEecCCCCCHHHH
Q 017382 274 TGVPTMYTRLIQGYEAMDTE---------------------------------LQAASASAAKQLRLMMCGSSALPLPVM 320 (372)
Q Consensus 274 ~~~p~~~~~l~~~~~~~~~~---------------------------------~~~~~~~~l~~lr~v~~gG~~~~~~~~ 320 (372)
.++|.+++.+.+........ +........+++|.+++||+++++++.
T Consensus 366 ~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~ 445 (700)
T PTZ00216 366 IGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQ 445 (700)
T ss_pred EechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH
Confidence 99999999987643211000 000111123789999999999999999
Q ss_pred HHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 321 QQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
+.++..++ +++++||+||+++..+.........+++|+|+||+++||+|.
T Consensus 446 ~~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~~~~~svG~p~~g~evkI~d~ 495 (700)
T PTZ00216 446 EFVNVVFG-MVIQGWGLTETVCCGGIQRTGDLEPNAVGQLLKGVEMKLLDT 495 (700)
T ss_pred HHHHHHhh-hHhhccCcccccccccccCCCCCCCCCcCCcCCCeEEEEeec
Confidence 88887778 999999999998665544334456789999999999999985
No 22
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=8.5e-45 Score=356.16 Aligned_cols=335 Identities=21% Similarity=0.312 Sum_probs=272.4
Q ss_pred HHHHHHHHhCCcCCCceEEEeCC------ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEc
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~ 75 (372)
++.+.|.++++.+|+++|+++.+ +.+||+||.++++++|++|.+ .|+++||+|++++
T Consensus 25 ~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~g~~Val~~ 87 (547)
T PRK13295 25 TINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLAR-----------------LGVGRGDVVSCQL 87 (547)
T ss_pred CHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEC
Confidence 67888999999999999999865 899999999999999999999 4999999999999
Q ss_pred CCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch-----HHHHHHHHhhcCC--cccccCCCCC
Q 017382 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY-----REVLQNVASKSGA--KFSLIPPVPN 148 (372)
Q Consensus 76 ~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~ 148 (372)
+|+++++++++|++++|++++|+++.++.+++.++++.++++++|+++++ .+.+.++...... .+..+... .
T Consensus 88 ~n~~e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 166 (547)
T PRK13295 88 PNWWEFTVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGD-G 166 (547)
T ss_pred CCChHHHHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCC-C
Confidence 99999999999999999999999999999999999999999999998754 2333333222211 11111110 0
Q ss_pred CCCCcccc--------ccc-ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecC
Q 017382 149 VSSETTVF--------DQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLP 219 (372)
Q Consensus 149 ~~~~~~~~--------~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p 219 (372)
........ ... .........++++++|+|||||||.||+|+++|+++...+......++++++|++++..|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p 246 (547)
T PRK13295 167 ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASP 246 (547)
T ss_pred ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecC
Confidence 00000000 000 000112245689999999999999999999999999998888888888999999999999
Q ss_pred chhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhh
Q 017382 220 LHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (372)
Q Consensus 220 l~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~ 299 (372)
++|..++...++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+... ...
T Consensus 247 ~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~p~~~~~l~~~~~--------~~~ 308 (547)
T PRK13295 247 MAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAEL----------IRTEGVTFTMASTPFLTDLTRAVK--------ESG 308 (547)
T ss_pred chhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHH----------HHHcCCcEEEecHHHHHHHHhccc--------ccC
Confidence 99999987788999999999999999999999998 788999999999999999887532 123
Q ss_pred hhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCCC--CCCCCcccccCCCceEEEeecC
Q 017382 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 300 ~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~--~~~~~svG~p~~g~~i~Ivd~d 372 (372)
.+++++|.+++||+++++++.+.+.+.++.++++.||+||++.+.+..... .....++|+|+++++++|+|++
T Consensus 309 ~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~ 383 (547)
T PRK13295 309 RPVSSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDAD 383 (547)
T ss_pred CCcccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCC
Confidence 467899999999999999999999999999999999999998665433221 2335789999999999999864
No 23
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=8.3e-45 Score=361.51 Aligned_cols=336 Identities=20% Similarity=0.257 Sum_probs=263.0
Q ss_pred HHHHHHhCCcCCCceEEEeCC------ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCC
Q 017382 4 FKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (372)
Q Consensus 4 ~~~l~~~a~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n 77 (372)
++.+.++++.+|+++|+++.+ +++||+||.+++.++|+.|++ +|+++||+|+++++|
T Consensus 60 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n 122 (625)
T TIGR02188 60 YNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKS-----------------LGVKKGDRVAIYMPM 122 (625)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCC
Confidence 456667888899999998643 489999999999999999999 599999999999999
Q ss_pred CHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch---------HHHHHHHHhhcC--Cc-ccccCC
Q 017382 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSG--AK-FSLIPP 145 (372)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~--~~-~~~~~~ 145 (372)
+++++++++||+++|++++|+++.++++++.+++++++++++|+++.. .+.+.+.....+ .. ++.+..
T Consensus 123 ~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (625)
T TIGR02188 123 IPEAAIAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRR 202 (625)
T ss_pred CHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcC
Confidence 999999999999999999999999999999999999999999998753 223333322221 11 111111
Q ss_pred CCC---CCCC--ccc---cc-ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHH-HHhhcccCCCCeEE
Q 017382 146 VPN---VSSE--TTV---FD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFL 215 (372)
Q Consensus 146 ~~~---~~~~--~~~---~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~d~~l 215 (372)
... .... ... .. ...........++++++|+|||||||.||||+++|.+++..... ....+++.++|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~ 282 (625)
T TIGR02188 203 TGNPVPWVEGRDVWWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFW 282 (625)
T ss_pred CCCCcCccccccccHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEE
Confidence 100 0000 000 00 00011122356789999999999999999999999998765443 34456888999999
Q ss_pred EecCchhHHHHHHHHHHHHHcCceEEEcCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhcc
Q 017382 216 HCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (372)
Q Consensus 216 ~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~ 291 (372)
+..|++|..+....++.+|..|+++++.+. +++..+++. ++++++|++.++|++++.+.+....
T Consensus 283 ~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~-- 350 (625)
T TIGR02188 283 CTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEI----------IEKHKVTIFYTAPTAIRALMRLGDE-- 350 (625)
T ss_pred ECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHH----------HHHhCCeEEEeCHHHHHHHHhcCCc--
Confidence 999999998876678899999999999764 478889988 8889999999999999999875321
Q ss_pred HHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhC---CccccccccccccccccCCCC--CCCCCCcccccCCCceE
Q 017382 292 TELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQV 366 (372)
Q Consensus 292 ~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~---~~l~~~YG~tE~~~~~~~~~~--~~~~~~svG~p~~g~~i 366 (372)
.....++++||.+++||+++++++++++.+.++ +++++.||+||+++.++.... ...+++++|+|++|+++
T Consensus 351 ----~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~ 426 (625)
T TIGR02188 351 ----WVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEP 426 (625)
T ss_pred ----ccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceE
Confidence 123457899999999999999999999999885 789999999999876543321 23567899999999999
Q ss_pred EEeecC
Q 017382 367 SMILLL 372 (372)
Q Consensus 367 ~Ivd~d 372 (372)
+|+|.+
T Consensus 427 ~i~d~~ 432 (625)
T TIGR02188 427 AVVDEE 432 (625)
T ss_pred EEECCC
Confidence 999854
No 24
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-44 Score=351.25 Aligned_cols=329 Identities=24% Similarity=0.341 Sum_probs=274.3
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
.+.+.+.++|+.+||++|++++++.+||+||.++++++|+.|++. +|+++||+|+++++|++++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~----------------~g~~~~~~V~i~~~~~~~~ 66 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYE----------------LNVKKGERIAILSQNSLEY 66 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 367889999999999999999999999999999999999999863 5999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCc-ccccCCCCCCCCCcccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVSSETTVFDQSQ 160 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (372)
+++++|++++|++++|+++..+++++.++++++++++++++++..+.+.......... ...+....... ...
T Consensus 67 ~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 139 (496)
T PRK06839 67 IVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITSLKEIE-------DRK 139 (496)
T ss_pred HHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecchHhhh-------ccC
Confidence 9999999999999999999999999999999999999999988776666554332211 11111111000 000
Q ss_pred cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceE
Q 017382 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (372)
Q Consensus 161 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 240 (372)
........++++++|+|||||||.||+|.++|.++..........+.+..+|++++.+|++|..++....+.++..|+++
T Consensus 140 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~ 219 (496)
T PRK06839 140 IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVI 219 (496)
T ss_pred CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEE
Confidence 11122345689999999999999999999999999877776677778889999999999999999876677889999999
Q ss_pred EEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHH
Q 017382 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (372)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~ 320 (372)
++.+.++++.+++. ++++++|++.++|++++.+++... ....+++++|.+++||+++++++.
T Consensus 220 ~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~lr~~~~gG~~~~~~~~ 281 (496)
T PRK06839 220 IVPRKFEPTKALSM----------IEKHKVTVVMGVPTIHQALINCSK--------FETTNLQSVRWFYNGGAPCPEELM 281 (496)
T ss_pred EEccCCCHHHHHHH----------HHhhCCeEEEehHHHHHHHHhCcc--------cccCCCcccceEEECCCCCCHHHH
Confidence 99999999999998 788999999999999999987532 223467899999999999999999
Q ss_pred HHHHHHhCCccccccccccccccccCC--CCCCCCCCcccccCCCceEEEeecC
Q 017382 321 QQWETITGHRLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~~--~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+.|.+. |.++.+.||+||++.+++.. .......+++|+|+++++++|+|++
T Consensus 282 ~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~ 334 (496)
T PRK06839 282 REFIDR-GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDEN 334 (496)
T ss_pred HHHHHh-CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCC
Confidence 999886 99999999999998654422 2223567899999999999999864
No 25
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-44 Score=360.11 Aligned_cols=340 Identities=20% Similarity=0.240 Sum_probs=257.1
Q ss_pred HHHHHHHHhCCcCCCceEEEeCC------ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEc
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~ 75 (372)
++.+.|.++++++||++|+++.+ +.+||+||.++++++|+.|.+ .|+++||+|++++
T Consensus 50 ~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~ 112 (624)
T PRK12582 50 SIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLD-----------------LGLDPGRPVMILS 112 (624)
T ss_pred CHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEec
Confidence 67889999999999999998743 689999999999999999998 4999999999999
Q ss_pred CCCHhHHHHHHHHHhhCceeeeCCCCCCH-----HHHHHHHhhCCceEEEeccch--HHHHHHHHhhcCCcccccCCCCC
Q 017382 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPE-----SELLHVMHDSDISMVLSTEDY--REVLQNVASKSGAKFSLIPPVPN 148 (372)
Q Consensus 76 ~n~~~~~~~~~A~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 148 (372)
+|+++++++++||+++|++++|+++.++. +++.+++++++++++|+++.. .+.+.... ......+.+.....
T Consensus 113 ~n~~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~ 191 (624)
T PRK12582 113 GNSIEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALD-LLDVTVVHVTGPGE 191 (624)
T ss_pred CCCHHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhh-hcCceEEEEcCCCc
Confidence 99999999999999999999999999874 899999999999999998642 12222111 11112222211100
Q ss_pred CCCCcccc---cccc----cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCC---CCeEEEec
Q 017382 149 VSSETTVF---DQSQ----AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS---ADQFLHCL 218 (372)
Q Consensus 149 ~~~~~~~~---~~~~----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~---~d~~l~~~ 218 (372)
........ .... ........++++++|+|||||||.||||++||+++..+.......+.... .++++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~l 271 (624)
T PRK12582 192 GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWM 271 (624)
T ss_pred ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEec
Confidence 00000000 0000 00112345789999999999999999999999999887776655444443 58999999
Q ss_pred CchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHh
Q 017382 219 PLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (372)
Q Consensus 219 pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~ 297 (372)
|++|.+++...++.++..|+++++.+. +.+..+.+.+.. ++++++|+++++|+++..+.+.+... +..
T Consensus 272 Pl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~-------i~~~~~t~~~~vP~~~~~l~~~~~~~----~~~ 340 (624)
T PRK12582 272 PWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRN-------LREISPTVYGNVPAGYAMLAEAMEKD----DAL 340 (624)
T ss_pred hHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHH-------HHhcCCeEEeccCHHHHHHHHHHhhC----HHH
Confidence 999999987677788999999999763 444433333221 78899999999999999987653321 122
Q ss_pred hhhhccCceEEEecCCCCCHHHHHHHHHHh----C--CccccccccccccccccCCCCCCCCCCcccccCCCceEEEee
Q 017382 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT----G--HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 298 ~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~----~--~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd 370 (372)
...++++||.+++||+++++++.+.|.+.+ | +++++.||+||++.++........+.+++|+|+||++++|++
T Consensus 341 ~~~~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~ 419 (624)
T PRK12582 341 RRSFFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAP 419 (624)
T ss_pred HHHHhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEcc
Confidence 345678999999999999999999998863 3 689999999999866553222335678999999999999975
No 26
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-44 Score=351.93 Aligned_cols=337 Identities=27% Similarity=0.399 Sum_probs=278.0
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+++.+.|.+.++.+|+++|+.++++++||+||.+++.++|+.|.+ .|+++||+|+++++|+++
T Consensus 5 ~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gv~~g~~V~l~~~~~~~ 67 (513)
T PRK07656 5 MTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAA-----------------LGIGKGDRVAIWAPNSPH 67 (513)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChH
Confidence 468899999999999999999999999999999999999999998 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC-ccc-ccCCCCCCC------CC
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFS-LIPPVPNVS------SE 152 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~------~~ 152 (372)
++++++||+++|++++|+++..+.+++.+++++++++++++++............... ..+ ......... ..
T Consensus 68 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (513)
T PRK07656 68 WVIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMKTF 147 (513)
T ss_pred HHHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccccH
Confidence 9999999999999999999999999999999999999999998766655544322221 111 111110000 00
Q ss_pred ccccccc-ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHH
Q 017382 153 TTVFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (372)
Q Consensus 153 ~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~ 231 (372)
....... .........++++++|+|||||||.||+|.++|.++...+......++++++|++++.+|++|.+++...++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (513)
T PRK07656 148 TDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVN 227 (513)
T ss_pred HHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHH
Confidence 0000000 011223456789999999999999999999999999998888888889999999999999999999887789
Q ss_pred HHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEec
Q 017382 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (372)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~g 311 (372)
.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+.... ...+++++|.+++|
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~--------~~~~~~~l~~v~~~ 289 (513)
T PRK07656 228 APLMRGATILPLPVFDPDEVFRL----------IETERITVLPGPPTMYNSLLQHPDR--------SAEDLSSLRLAVTG 289 (513)
T ss_pred HHHHcCceEEecCcCCHHHHHHH----------HHHhCCeEEechHHHHHHHHcCCCc--------CCCCccceeeEEec
Confidence 99999999999999999999998 7889999999999999999876332 22367899999999
Q ss_pred CCCCCHHHHHHHHHHhCC-ccccccccccccccccCCC-CCCCC--CCcccccCCCceEEEeecC
Q 017382 312 SSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPL-RGARK--AGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 312 G~~~~~~~~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~-~~~~~--~~svG~p~~g~~i~Ivd~d 372 (372)
|+++++++.+.|.+.++. .+++.||+||++++.+... ..... .+++|+|++|++++|+|++
T Consensus 290 g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~ 354 (513)
T PRK07656 290 AASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNEL 354 (513)
T ss_pred CCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCC
Confidence 999999999999999998 9999999999976655332 22222 6889999999999999853
No 27
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.7e-45 Score=369.76 Aligned_cols=334 Identities=25% Similarity=0.353 Sum_probs=264.6
Q ss_pred CHHHHHHHHhCCcCCC-ceEEEeC-CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC
Q 017382 1 MEVFKAAYKKGSMARD-SVAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~-~~al~~~-~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~ 78 (372)
.|+.+.|.++++++|+ ++|+.+. ++.+||+||.++++++|++|.+ .+++||+|+++++|+
T Consensus 204 ~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~------------------~~~~gd~Val~~~n~ 265 (718)
T PRK08043 204 ETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEK------------------YSVEGERIGLMLPNA 265 (718)
T ss_pred CCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHH------------------hcCCCceEEEEcCCc
Confidence 3678899999999998 6888763 4789999999999999999988 358999999999999
Q ss_pred HhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHH--HHHhhcC-CcccccCCCCCCCCCccc
Q 017382 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ--NVASKSG-AKFSLIPPVPNVSSETTV 155 (372)
Q Consensus 79 ~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~ 155 (372)
++++++++||+++|++++|+++.++++++.+++++++++++|++++..+... ....... ...+.+............
T Consensus 266 ~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 345 (718)
T PRK08043 266 TISAAVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTADK 345 (718)
T ss_pred HHHHHHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhHH
Confidence 9999999999999999999999999999999999999999999876544211 0111111 011111110000000000
Q ss_pred ----cc-ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHH
Q 017382 156 ----FD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (372)
Q Consensus 156 ----~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~ 230 (372)
.. ...........++|+++|+|||||||.||||++||+++...+......++++.+|++++.+|++|.+++...+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~ 425 (718)
T PRK08043 346 LWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGL 425 (718)
T ss_pred HHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHH
Confidence 00 0000111234568999999999999999999999999999888887878899999999999999999987778
Q ss_pred HHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEE
Q 017382 231 LAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (372)
Q Consensus 231 ~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~ 309 (372)
+.++..|+++++.+. +++..+++. ++++++|+++++|+++..+.+. ....++++||.++
T Consensus 426 ~~~l~~G~~vv~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~~~----------~~~~~~~~lr~i~ 485 (718)
T PRK08043 426 FTPLLTGAEVFLYPSPLHYRIVPEL----------VYDRNCTVLFGTSTFLGNYARF----------ANPYDFARLRYVV 485 (718)
T ss_pred HHHHHcCCEEEEeCCcccHHHHHHH----------HHhcCCeEEEchHHHHHHhhhh----------cCcccccceEEEE
Confidence 899999999998875 566677776 7789999999999998876542 1234678999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeecC
Q 017382 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 310 ~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+||+++++++.+.|.+.||+++++.||+||++.+.+.......+.+++|+|+||++++|+|.+
T Consensus 486 ~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~~~i~d~~ 548 (718)
T PRK08043 486 AGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVP 548 (718)
T ss_pred EeCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCcccCCCCCCCcCCCCeeEEecCC
Confidence 999999999999999999999999999999986655433334567899999999999999864
No 28
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-44 Score=360.15 Aligned_cols=338 Identities=17% Similarity=0.141 Sum_probs=254.4
Q ss_pred HHHHHHhCCc--CCCceEEEeC------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEc
Q 017382 4 FKAAYKKGSM--ARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (372)
Q Consensus 4 ~~~l~~~a~~--~~~~~al~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~ 75 (372)
++.+.+++.. +|+++|+++. .+++||+||.+++.++|+.|++ +|+++||+|++++
T Consensus 62 ~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GDrV~i~~ 124 (647)
T PTZ00237 62 YNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLN-----------------LNISKNDNVLIYM 124 (647)
T ss_pred HHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEC
Confidence 4455666654 7999999873 3689999999999999999999 5999999999999
Q ss_pred CCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc---------hHHHHHHHHhhcC---Cccccc
Q 017382 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED---------YREVLQNVASKSG---AKFSLI 143 (372)
Q Consensus 76 ~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~---------~~~~~~~~~~~~~---~~~~~~ 143 (372)
+|++++++++|||+++|++++|+++.++.+++.+++++++++++|+++. ..+.+.+...... ..++.+
T Consensus 125 ~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~ 204 (647)
T PTZ00237 125 ANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITL 204 (647)
T ss_pred CCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEE
Confidence 9999999999999999999999999999999999999999999999752 2233333222111 111111
Q ss_pred CCCC--------------CCCCCccccc---------ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhh-HHHHH
Q 017382 144 PPVP--------------NVSSETTVFD---------QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKS-IDAQV 199 (372)
Q Consensus 144 ~~~~--------------~~~~~~~~~~---------~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~-l~~~~ 199 (372)
.... .........+ ...........++++++|+|||||||.||||+++|.+ +....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~ 284 (647)
T PTZ00237 205 FRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLK 284 (647)
T ss_pred EcCCcccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHH
Confidence 1000 0000000000 0000011234678999999999999999999999998 44433
Q ss_pred HHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCC--c----hhHHHHHHHhhCCCCCCCCCcceeEe
Q 017382 200 QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF--S----VRGIWQRWRESYPVNGNRAGEAITAF 273 (372)
Q Consensus 200 ~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~--~----~~~~~~~~~~~~~~~~~i~~~~~t~~ 273 (372)
......+....+|++++..|++|+.+.. .++.++..|+++++.+.. . +..+++. ++++++|++
T Consensus 285 ~~~~~~~~~~~~d~~~~~~~~~w~~~~~-~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~----------i~~~~vt~~ 353 (647)
T PTZ00237 285 YYWRSIIEKDIPTVVFSHSSIGWVSFHG-FLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNT----------IEKHKVTHT 353 (647)
T ss_pred HHHHHhcCCCCCcEEEEcCCCceEeeHH-HHHHHHhCCcEEEEeCCCCCCCCCchHHHHHH----------HHHhCeEEE
Confidence 3334455677889999999999987664 578899999999997641 2 5778888 889999999
Q ss_pred ecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCC-CCC
Q 017382 274 TGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GAR 352 (372)
Q Consensus 274 ~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~ 352 (372)
.++|++++.+++...... ......++++||.+++||+++++++.+++.+.+|+++++.||+||+++..+.... ...
T Consensus 354 ~~~P~~~~~l~~~~~~~~---~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~~~~ 430 (647)
T PTZ00237 354 LTLPKTIRYLIKTDPEAT---IIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGHINI 430 (647)
T ss_pred EeCHHHHHHHHhhCcccc---ccccccCcchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCCCCC
Confidence 999999999987421100 0123457899999999999999999999999999999999999999865443222 223
Q ss_pred CCCcccccCCCceEEEeecC
Q 017382 353 KAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 353 ~~~svG~p~~g~~i~Ivd~d 372 (372)
..+++|+|+||++++|+|++
T Consensus 431 ~~~s~G~p~~g~~~~i~d~~ 450 (647)
T PTZ00237 431 PYNATGVPSIFIKPSILSED 450 (647)
T ss_pred CCCCCccCcCCceEEEECCC
Confidence 44899999999999999864
No 29
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=4.6e-44 Score=350.26 Aligned_cols=336 Identities=21% Similarity=0.297 Sum_probs=271.4
Q ss_pred CHHHHHHHHhCCcCCCceEEEeC--CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC
Q 017382 1 MEVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~ 78 (372)
+|+.+.+.+++..+|+++|+++. ++++||.||.++++++|+.|.+ .|+++||+|+++++|+
T Consensus 23 ~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~-----------------~g~~~gd~V~i~~~~~ 85 (537)
T PLN02246 23 LPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHK-----------------LGIRQGDVVMLLLPNC 85 (537)
T ss_pred CcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCC
Confidence 57889999999999999999875 5789999999999999999998 4999999999999999
Q ss_pred HhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCC-CCCCccccc
Q 017382 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN-VSSETTVFD 157 (372)
Q Consensus 79 ~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 157 (372)
++++++++||+++|++++|+++.++.+++.++++.++++++|+++...+.+...........+.++.... .........
T Consensus 86 ~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 165 (537)
T PLN02246 86 PEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFSELTQ 165 (537)
T ss_pred hHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHHHHhc
Confidence 9999999999999999999999999999999999999999999988776665543321122222221110 000000000
Q ss_pred -ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHh----hcccCCCCeEEEecCchhHHHHHHHHHH
Q 017382 158 -QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEYTSADQFLHCLPLHHVHGLFNALLA 232 (372)
Q Consensus 158 -~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 232 (372)
...........++++++++|||||||.||+|+++|++++........ .+.+..+|++++.+|++|..++...++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 245 (537)
T PLN02246 166 ADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLC 245 (537)
T ss_pred CCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHH
Confidence 00001122345789999999999999999999999999887765433 4578899999999999999998767788
Q ss_pred HHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecC
Q 017382 233 PLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (372)
Q Consensus 233 ~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG 312 (372)
++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+... ....+++++|.+++||
T Consensus 246 ~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~--------~~~~~~~~lr~~~~gg 307 (537)
T PLN02246 246 GLRVGAAILIMPKFEIGALLEL----------IQRHKVTIAPFVPPIVLAIAKSPV--------VEKYDLSSIRMVLSGA 307 (537)
T ss_pred HHhcCCEEEEeCCCCHHHHHHH----------HHHhCceEEEcchHHHHHHhcCcc--------ccccCccceeEEEEec
Confidence 8999999999999999999988 788999999999999998876522 2234678999999999
Q ss_pred CCCCHHHHHHHHHHh-CCccccccccccccccccCCC-----CCCCCCCcccccCCCceEEEeec
Q 017382 313 SALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL-----RGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 313 ~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~-----~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
+++++++.+.+.+.+ +..+++.||+||++.+++... ....+++++|+|+++++++|+|.
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~ 372 (537)
T PLN02246 308 APLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDP 372 (537)
T ss_pred CcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecC
Confidence 999999999999988 678999999999986544221 11235678999999999999985
No 30
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-44 Score=354.23 Aligned_cols=334 Identities=22% Similarity=0.267 Sum_probs=267.1
Q ss_pred HHHHHHhCC-cCCCceEEEeCC----ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC
Q 017382 4 FKAAYKKGS-MARDSVAIRADQ----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (372)
Q Consensus 4 ~~~l~~~a~-~~~~~~al~~~~----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~ 78 (372)
++.+.+++. .+|+++|+.+.+ +++||+||.+++.++|..|.+ .|+++||+|+++++|+
T Consensus 46 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-----------------~gv~~gd~V~i~~~n~ 108 (570)
T PRK04319 46 YEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKE-----------------LGVEKGDRVFIFMPRI 108 (570)
T ss_pred HHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCC
Confidence 356777776 579999998743 689999999999999999998 4999999999999999
Q ss_pred HhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC--CcccccCCCCCC-CCCccc
Q 017382 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKFSLIPPVPNV-SSETTV 155 (372)
Q Consensus 79 ~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~ 155 (372)
++++++++|++++|++++|+++.++++++.+++++++++++|+++...+..... ... ..++.+...... ......
T Consensus 109 ~~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 186 (570)
T PRK04319 109 PELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPAD--DLPSLKHVLLVGEDVEEGPGTLDF 186 (570)
T ss_pred HHHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchh--cCCCceEEEEECCCcCCCcCccCH
Confidence 999999999999999999999999999999999999999999998765433211 111 111111111100 000000
Q ss_pred c----cccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHH
Q 017382 156 F----DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (372)
Q Consensus 156 ~----~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~ 231 (372)
. ............++++++|+|||||||.||+|+++|++++.++......+.+.++|++++..|++|..+....++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~ 266 (570)
T PRK04319 187 NALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIF 266 (570)
T ss_pred HHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHH
Confidence 0 000111122345689999999999999999999999999988888888888999999999999999998877788
Q ss_pred HHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEe
Q 017382 232 APLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310 (372)
Q Consensus 232 ~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~ 310 (372)
.++..|+++++.+ .+++..+++. ++++++|+++++|++++.+.+.... .....+++++|.+++
T Consensus 267 ~~l~~G~~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~~~~ 330 (570)
T PRK04319 267 APWLNGATNVIDGGRFSPERWYRI----------LEDYKVTVWYTAPTAIRMLMGAGDD------LVKKYDLSSLRHILS 330 (570)
T ss_pred HHHhcCceEEEECCCCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhcCCc------ccccCCcccceEEEE
Confidence 9999999999875 5889999998 8889999999999999999764211 112346789999999
Q ss_pred cCCCCCHHHHHHHHHHhCCccccccccccccccccCC-CCCCCCCCcccccCCCceEEEeecC
Q 017382 311 GSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 311 gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
||+++++++.+.+.+.+|.++++.||+||++...+.. ......++++|+|+||++++|+|++
T Consensus 331 gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~ 393 (570)
T PRK04319 331 VGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQ 393 (570)
T ss_pred cccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCC
Confidence 9999999999999999999999999999998654432 2223467899999999999999864
No 31
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.1e-44 Score=355.92 Aligned_cols=336 Identities=20% Similarity=0.278 Sum_probs=260.8
Q ss_pred HHHHHHhCCcCCCceEEEeCC------ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCC
Q 017382 4 FKAAYKKGSMARDSVAIRADQ------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (372)
Q Consensus 4 ~~~l~~~a~~~~~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n 77 (372)
++.+.++++++|+++|+++.+ +++||+||.+++.++|+.|++ +|+++||+|+++++|
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n 132 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKS-----------------LGVKKGDRVAIYMPM 132 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCC
Confidence 355777888899999999643 479999999999999999999 499999999999999
Q ss_pred CHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH---------HHHHHHHhhcC-Cc-ccccCCC
Q 017382 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR---------EVLQNVASKSG-AK-FSLIPPV 146 (372)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~-~~-~~~~~~~ 146 (372)
+++++++++||+++|++++|+++.++.+++.+++++++++++|+++... +.+........ .. ++.....
T Consensus 133 ~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (637)
T PRK00174 133 IPEAAVAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRT 212 (637)
T ss_pred CHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCC
Confidence 9999999999999999999999999999999999999999999986532 22222222111 11 1111110
Q ss_pred CC---CCC--C---ccccc-ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHH-HHhhcccCCCCeEEE
Q 017382 147 PN---VSS--E---TTVFD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFLH 216 (372)
Q Consensus 147 ~~---~~~--~---~~~~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~d~~l~ 216 (372)
.. ... . ..... ...........++++++|+|||||||.||||+++|++++..... ....++++++|++++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~ 292 (637)
T PRK00174 213 GGDVDWVEGRDLWWHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWC 292 (637)
T ss_pred CCCcCcCCCCcccHHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEE
Confidence 00 000 0 00000 00011122345689999999999999999999999998765443 344568889999999
Q ss_pred ecCchhHHHHHHHHHHHHHcCceEEEcCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccH
Q 017382 217 CLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDT 292 (372)
Q Consensus 217 ~~pl~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~ 292 (372)
..|++|..+....++.+|+.|+++++.+. +++..+++. ++++++|++.++|++++.+++....
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~--- 359 (637)
T PRK00174 293 TADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEV----------IDKHKVTIFYTAPTAIRALMKEGDE--- 359 (637)
T ss_pred cCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHH----------HHhcCCeEEeecHHHHHHHHhcCCc---
Confidence 99999999886678899999999999753 478888888 8899999999999999998875221
Q ss_pred HHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhC---CccccccccccccccccCCCC--CCCCCCcccccCCCceEE
Q 017382 293 ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG---HRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQVS 367 (372)
Q Consensus 293 ~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~---~~l~~~YG~tE~~~~~~~~~~--~~~~~~svG~p~~g~~i~ 367 (372)
.....++++||.+++||+++++++++.+.+.++ +++++.||+||+++..+.... ...+.+++|+|++|++++
T Consensus 360 ---~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~ 436 (637)
T PRK00174 360 ---HPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPA 436 (637)
T ss_pred ---ccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEE
Confidence 112346789999999999999999999998886 789999999999865543221 234568999999999999
Q ss_pred EeecC
Q 017382 368 MILLL 372 (372)
Q Consensus 368 Ivd~d 372 (372)
|+|.+
T Consensus 437 i~d~~ 441 (637)
T PRK00174 437 VVDEE 441 (637)
T ss_pred EECCC
Confidence 99964
No 32
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.1e-43 Score=344.99 Aligned_cols=332 Identities=33% Similarity=0.507 Sum_probs=273.4
Q ss_pred HHHHHHHHhCCcCCCceEEEe-CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 2 EVFKAAYKKGSMARDSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
++++.+..++ .+|+++|+.. +++.+||+||.+++.++|+.|++ +|+++||+|+++++|+++
T Consensus 4 ~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~-----------------~g~~~gd~v~i~~~~~~e 65 (504)
T PRK07514 4 NLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVA-----------------LGVKPGDRVAVQVEKSPE 65 (504)
T ss_pred cHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHH
Confidence 5789999999 8999999997 67899999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCc-ccccCCCCCCCCCccccccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPNVSSETTVFDQS 159 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 159 (372)
+++.++|++++|++++|+++..+.+++.++++.++++++++++...+.+.......... ...+................
T Consensus 66 ~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (504)
T PRK07514 66 ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAAP 145 (504)
T ss_pred HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhcC
Confidence 99999999999999999999999999999999999999999988776665554332222 11111110000000000000
Q ss_pred ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCce
Q 017382 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (372)
Q Consensus 160 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~ 239 (372)
.........++++++|+|||||||.||+|.+||+++...+......+++.++|++++.+|++|..++...++.+++.|++
T Consensus 146 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 146 DDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 01112234578999999999999999999999999999988888888899999999999999999987778899999999
Q ss_pred EEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHH
Q 017382 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (372)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~ 319 (372)
+++.+.+++..+++. + .++|++.++|+++..+++... .....++++|.+++||+++++++
T Consensus 226 ~~~~~~~~~~~~~~~----------i--~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~lr~~~~gg~~~~~~~ 285 (504)
T PRK07514 226 MIFLPKFDPDAVLAL----------M--PRATVMMGVPTFYTRLLQEPR--------LTREAAAHMRLFISGSAPLLAET 285 (504)
T ss_pred EEECCCCCHHHHHHH----------H--HhheeeecHHHHHHHHHcCCC--------CCcccccceeeEEecCCCCCHHH
Confidence 999999999999888 5 369999999999998876521 22346789999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 320 MQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 320 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
.+.|.+.++.++++.||+||++...+.........+++|+|++|++++|+|+
T Consensus 286 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~ 337 (504)
T PRK07514 286 HREFQERTGHAILERYGMTETNMNTSNPYDGERRAGTVGFPLPGVSLRVTDP 337 (504)
T ss_pred HHHHHHHhCCcceeecccccccccccCCccccccCcccccCCCCcEEEEEEC
Confidence 9999999999999999999998665544433445688999999999999993
No 33
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=4.9e-44 Score=358.63 Aligned_cols=330 Identities=20% Similarity=0.183 Sum_probs=254.8
Q ss_pred HHHhCCcCCCceEEEeCC--------ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC
Q 017382 7 AYKKGSMARDSVAIRADQ--------KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (372)
Q Consensus 7 l~~~a~~~~~~~al~~~~--------~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~ 78 (372)
|.+++..+|+++|+++.+ +++||+||.+++.++|+.|++ +|+++||+|+++++|+
T Consensus 181 l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrVai~~pn~ 243 (728)
T PLN03052 181 LTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDA-----------------LGFEKGDAIAIDMPMN 243 (728)
T ss_pred HHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCC
Confidence 444556789999999754 379999999999999999999 5999999999999999
Q ss_pred HhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH------HHHHHHHhhcCCcccccCCCCC---C
Q 017382 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR------EVLQNVASKSGAKFSLIPPVPN---V 149 (372)
Q Consensus 79 ~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~---~ 149 (372)
++++++++||+++|++++|+++.++.+++.+++++++++++|+++... +....+........+++..... .
T Consensus 244 ~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~ 323 (728)
T PLN03052 244 VHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRV 323 (728)
T ss_pred HHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCcccc
Confidence 999999999999999999999999999999999999999999987532 1122221111112222211000 0
Q ss_pred ------CCCccccccc-----ccc-cccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEe
Q 017382 150 ------SSETTVFDQS-----QAE-KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHC 217 (372)
Q Consensus 150 ------~~~~~~~~~~-----~~~-~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~ 217 (372)
.......... ... ......++++++|+|||||||.||||+++|.+++........+++++++|++++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~ 403 (728)
T PLN03052 324 KLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWP 403 (728)
T ss_pred ccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEEC
Confidence 0000000000 000 0111245899999999999999999999999987776666666788999999999
Q ss_pred cCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHH
Q 017382 218 LPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296 (372)
Q Consensus 218 ~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~ 296 (372)
.|++|+.+.+ .++.+|..|+++++.++ +.+..+++. ++++++|++.++|++++.+.+.. .
T Consensus 404 ~~l~w~~g~~-~v~~~L~~Gat~vl~~g~p~~~~~~~~----------i~~~~vT~l~~~Pt~l~~l~~~~--------~ 464 (728)
T PLN03052 404 TNLGWMMGPW-LVYASLLNGATLALYNGSPLGRGFAKF----------VQDAKVTMLGTVPSIVKTWKNTN--------C 464 (728)
T ss_pred CCcHHHhHHH-HHHHHHHhCCEEEEeCCCCCCChHHHH----------HHHHCCCEEEECHHHHHHHHhcC--------C
Confidence 9999999985 57889999999999875 455678887 78899999999999999987641 1
Q ss_pred hhhhhccCceEEEecCCCCCHHHHHHHHHHhC-Ccccccccccccccccc-CCCCCCCCCCcccccCCCceEEEeecC
Q 017382 297 ASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 297 ~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~-~~l~~~YG~tE~~~~~~-~~~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
....++++||.+++||++++++....+.+.++ .++++.||+||+++... .........+++|+|++|++++|+|.+
T Consensus 465 ~~~~dlssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~ 542 (728)
T PLN03052 465 MAGLDWSSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDS 542 (728)
T ss_pred cccCChhheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCC
Confidence 13457899999999999999999888777765 57999999999875433 222223456889999999999999964
No 34
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-43 Score=345.59 Aligned_cols=336 Identities=23% Similarity=0.337 Sum_probs=280.7
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+++.+.|.++++.+|+++|+.+.++.+||+||.+++.++|+.|.+. |+++|++|+++++|+++
T Consensus 6 ~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------g~~~~~~V~l~~~~~~~ 68 (521)
T PRK06187 6 LTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRAL-----------------GVKKGDRVAVFDWNSHE 68 (521)
T ss_pred CCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 4788999999999999999999999999999999999999999994 99999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC--cccccCCCCC------CCCC
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPN------VSSE 152 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~ 152 (372)
++++++||+++|++++|+++..+.+++.++++.+++++++++.+..+.+.+....... +.+....... ....
T Consensus 69 ~~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (521)
T PRK06187 69 YLEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVGEY 148 (521)
T ss_pred HHHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccccH
Confidence 9999999999999999999999999999999999999999999888877776554432 2222211110 0000
Q ss_pred ccccc-ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHH
Q 017382 153 TTVFD-QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALL 231 (372)
Q Consensus 153 ~~~~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~ 231 (372)
..... ...........++++++++|||||||.||++.+||+++..........++++.+|++++.+|++|..++.. .+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~ 227 (521)
T PRK06187 149 EELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGL-PY 227 (521)
T ss_pred HHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHH-HH
Confidence 00000 01111123455688999999999999999999999999998888888889999999999999999998865 44
Q ss_pred HHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEec
Q 017382 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (372)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~g 311 (372)
.++..|+++++.+.+++..+++. ++++++|+++++|+++..+.+.... ...+++++|.+++|
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~----------l~~~~~t~l~~~p~~~~~l~~~~~~--------~~~~~~~l~~v~~~ 289 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDL----------IETERVTFFFAVPTIWQMLLKAPRA--------YFVDFSSLRLVIYG 289 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHH----------HHHhCCeEEEchHHHHHHHHcCcCC--------CccCcchhhEEEEc
Confidence 58999999999999999999888 7889999999999999999876432 23467899999999
Q ss_pred CCCCCHHHHHHHHHHhCCccccccccccccccccCCCCCC------CCCCcccccCCCceEEEeecC
Q 017382 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGA------RKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~------~~~~svG~p~~g~~i~Ivd~d 372 (372)
|+++++++++.|.+.+++++++.||+||++.+........ ...+++|+|+++++++|+|++
T Consensus 290 Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~ 356 (521)
T PRK06187 290 GAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDD 356 (521)
T ss_pred CcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCC
Confidence 9999999999999999999999999999987655432222 266899999999999999864
No 35
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-43 Score=347.96 Aligned_cols=337 Identities=22% Similarity=0.308 Sum_probs=265.6
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
|+.+.|.++++.+|+++|++.+++.+||+||.+++.++|+.|.+. .|+++||+|+++++|++++
T Consensus 25 ~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~----------------~gi~~gd~Vai~~~n~~~~ 88 (562)
T PRK05677 25 NIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQH----------------TDLKPGDRIAVQLPNVLQY 88 (562)
T ss_pred cHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 688899999999999999999999999999999999999999862 3999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCC------------
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV------------ 149 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 149 (372)
++++||++++|++++|+++..+.+++.+++++++++++|++++....+.+.......+.+.+......
T Consensus 89 ~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (562)
T PRK05677 89 PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAV 168 (562)
T ss_pred HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccc
Confidence 99999999999999999999999999999999999999998876655544432221111111110000
Q ss_pred -------------CCCccccc-----ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc--cC
Q 017382 150 -------------SSETTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YT 209 (372)
Q Consensus 150 -------------~~~~~~~~-----~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~ 209 (372)
.......+ ...........++++++|+|||||||.||+|+++|+++..++......+. +.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~ 248 (562)
T PRK05677 169 VKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLN 248 (562)
T ss_pred hhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCC
Confidence 00000000 00000112345689999999999999999999999999887766555443 33
Q ss_pred -CCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhh
Q 017382 210 -SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287 (372)
Q Consensus 210 -~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~ 287 (372)
..+++++.+|++|..++...++.++..|++.++.+ .+++..+++. ++++++|+++++|+++..+.+..
T Consensus 249 ~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~ 318 (562)
T PRK05677 249 EGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKE----------LGKWKFSGFVGLNTLFVALCNNE 318 (562)
T ss_pred CCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHH----------HHHcCceEEecHHHHHHHHHhCc
Confidence 34688999999999998766777888888777665 4678888888 88899999999999999887641
Q ss_pred hhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEE
Q 017382 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVS 367 (372)
Q Consensus 288 ~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~ 367 (372)
.....+++++|.+++||+++++++.+.|.+.+|+++++.||+||++.++.........++++|+|+++++++
T Consensus 319 --------~~~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~~~~v~ 390 (562)
T PRK05677 319 --------AFRKLDFSALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQAIQVGTIGIPVPSTLCK 390 (562)
T ss_pred --------ccccCChhhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccccCcceeecCccCCCCCccCccCCCCEEE
Confidence 112235678999999999999999999999899999999999998866654433344668899999999999
Q ss_pred EeecC
Q 017382 368 MILLL 372 (372)
Q Consensus 368 Ivd~d 372 (372)
|+|+|
T Consensus 391 i~d~~ 395 (562)
T PRK05677 391 VIDDD 395 (562)
T ss_pred EECCC
Confidence 99864
No 36
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-43 Score=349.86 Aligned_cols=337 Identities=22% Similarity=0.306 Sum_probs=270.0
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+|+.+.+.++++++|+++|+.++++.+||.||.++++++|+.|.+ .|+++||+|+++++|+++
T Consensus 32 ~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~-----------------~gi~~gd~V~l~~~n~~~ 94 (573)
T PRK05605 32 TTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRA-----------------LGVRPGDRVAIVLPNCPQ 94 (573)
T ss_pred CCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCHH
Confidence 468889999999999999999999999999999999999999998 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCccc-ccCCCC------------
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFS-LIPPVP------------ 147 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------ 147 (372)
++++++|++++|++++|+++.++.+++.+++++++++++|+++.....+..+........+ .+....
T Consensus 95 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 174 (573)
T PRK05605 95 HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRL 174 (573)
T ss_pred HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccc
Confidence 9999999999999999999999999999999999999999988766555444322111111 110000
Q ss_pred ---CCC-----------CCccccc---c-ccc----ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh
Q 017382 148 ---NVS-----------SETTVFD---Q-SQA----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA 205 (372)
Q Consensus 148 ---~~~-----------~~~~~~~---~-~~~----~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~ 205 (372)
... ......+ . ... .......++++++++|||||||.||+|.+||+++..++......
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 254 (573)
T PRK05605 175 PIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAW 254 (573)
T ss_pred ccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhh
Confidence 000 0000000 0 000 11123456899999999999999999999999998877654443
Q ss_pred cc-c-CCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 206 WE-Y-TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 206 ~~-~-~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
+. + ...+++++.+|++|.+|+...++.++..|+++++.+.++++.+++. ++++++|++.++|++++.+
T Consensus 255 ~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l 324 (573)
T PRK05605 255 VPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDA----------MKKHPPTWLPGVPPLYEKI 324 (573)
T ss_pred ccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHH----------HHHhCCEEEEchHHHHHHH
Confidence 32 2 3478999999999999987777788999999999999999999998 7889999999999999999
Q ss_pred HHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCC-CCCCCCCCcccccCC
Q 017382 284 IQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPLP 362 (372)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~~~~~~svG~p~~ 362 (372)
.+... ....+++++|.+++||+++++++.+.|.+.++.++++.||+||++++++.. .....+.+++|+|++
T Consensus 325 ~~~~~--------~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~ 396 (573)
T PRK05605 325 AEAAE--------ERGVDLSGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFP 396 (573)
T ss_pred HhCcc--------ccCCCchhccEEEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCcccCCcCCccccCCC
Confidence 87532 223467899999999999999999999998899999999999998665533 222345689999999
Q ss_pred CceEEEeecC
Q 017382 363 GVQVSMILLL 372 (372)
Q Consensus 363 g~~i~Ivd~d 372 (372)
|++++|+|.+
T Consensus 397 ~~~~~i~d~~ 406 (573)
T PRK05605 397 DTEVRIVDPE 406 (573)
T ss_pred CCEEEEEcCC
Confidence 9999999864
No 37
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=5.9e-44 Score=336.95 Aligned_cols=342 Identities=24% Similarity=0.359 Sum_probs=266.0
Q ss_pred CHHHHHHHHhCCcCCCceEEEe--------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 017382 1 MEVFKAAYKKGSMARDSVAIRA--------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~--------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (372)
+|+++.|.+.+..+|+.+++-. ..+++||+|.++++..++..|++ +|+++++.|+
T Consensus 75 ~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~-----------------lG~~~~~~VG 137 (691)
T KOG1256|consen 75 LTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRK-----------------LGVKEDSKVG 137 (691)
T ss_pred ccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCceEE
Confidence 4789999999999999999964 23789999999999999999998 6999999999
Q ss_pred EEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEec-cchHHHHHHHHhh--cC-Cc-ccccCCCC
Q 017382 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST-EDYREVLQNVASK--SG-AK-FSLIPPVP 147 (372)
Q Consensus 73 l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~--~~-~~-~~~~~~~~ 147 (372)
|++.|++||+++.+||...|.++||++.+++++.+.++++++..+++|++ +...+.+.+.... .+ .+ ++.+....
T Consensus 138 Iy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~ 217 (691)
T KOG1256|consen 138 IYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPS 217 (691)
T ss_pred EeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCc
Confidence 99999999999999999999999999999999999999999999999999 4555555554332 21 11 22222211
Q ss_pred C-CCC---C--------c---ccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHH---HHhhc---
Q 017382 148 N-VSS---E--------T---TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM---LTEAW--- 206 (372)
Q Consensus 148 ~-~~~---~--------~---~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~---~~~~~--- 206 (372)
. ... . . ...............|+|.|.|+|||||||.||||++||+|++..+.. .....
T Consensus 218 ~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~ 297 (691)
T KOG1256|consen 218 DELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAK 297 (691)
T ss_pred hhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhccccc
Confidence 0 000 0 0 001111111124667899999999999999999999999999986543 21111
Q ss_pred ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHh
Q 017382 207 EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQG 286 (372)
Q Consensus 207 ~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 286 (372)
.....|++++++|++|++......+. ++.|+++.+.. .|+..+.+. +++.+||.+.++|.+|+++.+.
T Consensus 298 ~~~~~dv~lSyLPLAHi~er~~~~~~-~~~G~~IgF~~-gD~~~l~~d----------lk~lkPT~f~~VPRVl~riye~ 365 (691)
T KOG1256|consen 298 ATVGDDVYLSYLPLAHIFERVVELYT-FYIGAKIGFAR-GDILKLTDD----------LKELKPTVFPGVPRVLERIYEG 365 (691)
T ss_pred ccccCceEEEeCcHHHHHHHHHHHhH-hhcccEEEEec-CChHHHHHH----------HHHhCCcEEeccHhHHHHHHHH
Confidence 22346999999999999999865554 68999999988 477777777 7788999999999999998875
Q ss_pred hhhcc----------------HHH---------------------HHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCC
Q 017382 287 YEAMD----------------TEL---------------------QAASASAAKQLRLMMCGSSALPLPVMQQWETITGH 329 (372)
Q Consensus 287 ~~~~~----------------~~~---------------------~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~ 329 (372)
..+.. .++ ...+.....++|.+++|++|+++++...++..+|+
T Consensus 366 I~~~~~~sgflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~ 445 (691)
T KOG1256|consen 366 IQKQVQKSGFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGC 445 (691)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCc
Confidence 32100 000 11233345789999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 330 RLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 330 ~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
+|+++||+||+++.++.....+...++||.|+|++++|++|.
T Consensus 446 ~v~eGYGlTEts~g~~~~~~~d~~lgsvG~p~p~~~vKL~dv 487 (691)
T KOG1256|consen 446 RVLEGYGLTETSAGTTLTLPGDNVLGSVGPPVPGNEVKLVDV 487 (691)
T ss_pred eeeecccccccCCceEeccCCCCCCCCcCCcccCceEEEech
Confidence 999999999998655544444558899999999999999874
No 38
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2.7e-43 Score=343.22 Aligned_cols=334 Identities=24% Similarity=0.363 Sum_probs=272.7
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++++.+.++++++|+++|+.++++++||+||.+++.++|+.|.+ .|+++||+|+++++|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~-----------------~g~~~~~~V~i~~~n~~~~ 63 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRG-----------------LGLARGERVAIYLDKRLET 63 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHHH
Confidence 36788999999999999999999999999999999999999998 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC--CcccccCCCCCCC-------CC
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKFSLIPPVPNVS-------SE 152 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~ 152 (372)
+++++||+++|++++|+++.++.+++.++++++++++++++++....+.+...... ...+.+....... ..
T Consensus 64 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (515)
T TIGR03098 64 VTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSW 143 (515)
T ss_pred HHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccH
Confidence 99999999999999999999999999999999999999998876655544433221 1111111111000 00
Q ss_pred cccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHH
Q 017382 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLA 232 (372)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 232 (372)
.................+++++|+|||||||.||+|.+||+++...+......+.+..+|++++.+|++|..++. .++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~ 222 (515)
T TIGR03098 144 PKLLALGDADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFN-QLTT 222 (515)
T ss_pred HHhhccccccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHH-HHHH
Confidence 000000011112233457899999999999999999999999999888888888889999999999999999986 5888
Q ss_pred HHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecC
Q 017382 233 PLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (372)
Q Consensus 233 ~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG 312 (372)
++..|+++++.+.++++.+++. ++++++|++.++|+++..+.+.. ....+++++|.+++||
T Consensus 223 ~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~---------~~~~~~~~l~~~~~~g 283 (515)
T TIGR03098 223 AFYVGATVVLHDYLLPRDVLKA----------LEKHGITGLAAVPPLWAQLAQLD---------WPESAAPSLRYLTNSG 283 (515)
T ss_pred HHHcCCEEEEcCCCCHHHHHHH----------HHHcCCceEecChHHHHHHHhcc---------cCCCCccceEEEEecC
Confidence 9999999999999999999998 78899999999999999887631 1123568999999999
Q ss_pred CCCCHHHHHHHHHHh-CCccccccccccccccccCCCC-CCCCCCcccccCCCceEEEeecC
Q 017382 313 SALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 313 ~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~-~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+++++++.+.+.+.+ +..+++.||+||++........ ...+.+++|+|++|++++|+|.+
T Consensus 284 ~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~ 345 (515)
T TIGR03098 284 GAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLRED 345 (515)
T ss_pred CcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCcceecCCCEEEEECCC
Confidence 999999999999988 7889999999998765443222 24567899999999999999853
No 39
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-43 Score=350.27 Aligned_cols=335 Identities=19% Similarity=0.237 Sum_probs=259.4
Q ss_pred HHHHHHhCCcCCCceEEEe------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCC
Q 017382 4 FKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (372)
Q Consensus 4 ~~~l~~~a~~~~~~~al~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n 77 (372)
++.+.++++.+|+++|+++ ..+++||+||.+++.++|+.|++ +|+++||+|+++++|
T Consensus 56 ~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~n 118 (629)
T PRK10524 56 HNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRS-----------------LGVQRGDRVLIYMPM 118 (629)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCC
Confidence 5567788888999999986 23689999999999999999999 599999999999999
Q ss_pred CHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch---------HHHHHHHHhhc---CCcccccCC
Q 017382 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKS---GAKFSLIPP 145 (372)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~---~~~~~~~~~ 145 (372)
+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.+..... ...++.+..
T Consensus 119 ~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~ 198 (629)
T PRK10524 119 IAEAAFAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDR 198 (629)
T ss_pred CHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeC
Confidence 999999999999999999999999999999999999999999997642 23333332211 112222211
Q ss_pred CCC-CC---C-Ccccc---cccc--cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHH-HHhhcccCCCCeE
Q 017382 146 VPN-VS---S-ETTVF---DQSQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQF 214 (372)
Q Consensus 146 ~~~-~~---~-~~~~~---~~~~--~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~d~~ 214 (372)
... .. . ..... .... ........++++++|+|||||||.||||+++|.+++..... ....++++++|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~ 278 (629)
T PRK10524 199 GLAPMARVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETF 278 (629)
T ss_pred CCCCcCcccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEE
Confidence 100 00 0 00000 0000 00111235689999999999999999999999997654433 4455678899999
Q ss_pred EEecCchhHHHHHHHHHHHHHcCceEEEcCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhc
Q 017382 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (372)
Q Consensus 215 l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~ 290 (372)
++..|++|..+....++.+++.|+++++.+. +++..+++. ++++++|+++++|++++.+.+...
T Consensus 279 ~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~-- 346 (629)
T PRK10524 279 FCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRI----------VEKYKVNRMFSAPTAIRVLKKQDP-- 346 (629)
T ss_pred EEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHH----------HHHcCceEEEeCHHHHHHHHhcCc--
Confidence 9999999998876678899999999998763 467888888 889999999999999998876421
Q ss_pred cHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccC-CC---CCCCCCCcccccCCCceE
Q 017382 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISN-PL---RGARKAGTVGNPLPGVQV 366 (372)
Q Consensus 291 ~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~-~~---~~~~~~~svG~p~~g~~i 366 (372)
......++++||.+++||+++++++.+++.+.++.++++.||+||++..+.. .. ....+.+++|+|++|+++
T Consensus 347 ----~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~ 422 (629)
T PRK10524 347 ----ALLRKHDLSSLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNV 422 (629)
T ss_pred ----ccccccChhheeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceE
Confidence 1123457889999999999999999999999999999999999999843322 11 123456899999999999
Q ss_pred EEeec
Q 017382 367 SMILL 371 (372)
Q Consensus 367 ~Ivd~ 371 (372)
+|+|.
T Consensus 423 ~i~d~ 427 (629)
T PRK10524 423 KLLNE 427 (629)
T ss_pred EEEeC
Confidence 99997
No 40
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=3.3e-43 Score=339.97 Aligned_cols=320 Identities=24% Similarity=0.345 Sum_probs=267.5
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
||+.+.|.++++++||++|++++++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~~~~v~i~~~~~~~ 64 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAA-----------------LGVKKGDRVALLMKNGME 64 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHH
Confidence 789999999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (372)
++++++|++++|++++|+++..+.+++.+++++++++.+++++........... . .+..... . ....
T Consensus 65 ~~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~---~---~~~~~~~---~----~~~~ 131 (483)
T PRK03640 65 MILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS---V---KFAELMN---G----PKEE 131 (483)
T ss_pred HHHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc---c---cHHHHhh---c----cccc
Confidence 999999999999999999999999999999999999999998765544332210 0 0000000 0 0000
Q ss_pred cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceE
Q 017382 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (372)
Q Consensus 161 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 240 (372)
........++++++++|||||||.||+|.+||.++...+......++++.+|++++.+|++|..++. .++.++..|+++
T Consensus 132 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~ 210 (483)
T PRK03640 132 AEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLS-ILMRSVIYGMRV 210 (483)
T ss_pred CCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHH-HHHHHHhcCCEE
Confidence 1111234568999999999999999999999999988877777778899999999999999999986 478889999999
Q ss_pred EEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHH
Q 017382 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (372)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~ 320 (372)
++.+.+++..+++. ++++++|++.++|+++..+.+.+... ....++|.+++||+++++++.
T Consensus 211 ~~~~~~~~~~~~~~----------i~~~~~t~l~~~P~~~~~l~~~~~~~---------~~~~~lr~~~~~g~~~~~~~~ 271 (483)
T PRK03640 211 VLVEKFDAEKINKL----------LQTGGVTIISVVSTMLQRLLERLGEG---------TYPSSFRCMLLGGGPAPKPLL 271 (483)
T ss_pred EecCCCCHHHHHHH----------HHHhCCcEEEeHHHHHHHHHhCcCcc---------ccCCcceEEEEcCCCCCHHHH
Confidence 99999999999998 78899999999999999998653210 234689999999999999999
Q ss_pred HHHHHHhCCccccccccccccccccC--CCCCCCCCCcccccCCCceEEEeec
Q 017382 321 QQWETITGHRLLERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~--~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
+.+.+. |+++++.||+||++..+.. ........+++|+|+++++++|+|.
T Consensus 272 ~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~ 323 (483)
T PRK03640 272 EQCKEK-GIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD 323 (483)
T ss_pred HHHHHh-CCCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecC
Confidence 988874 9999999999998754332 2222456789999999999999985
No 41
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=6.7e-43 Score=342.14 Aligned_cols=335 Identities=23% Similarity=0.304 Sum_probs=270.0
Q ss_pred HHHHHHHHhCCcCCCceEEEe------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEc
Q 017382 2 EVFKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~ 75 (372)
++.+.+.++++.+|+++|++. .++.+||+||.+++.++|..|++ .|+++||+|++++
T Consensus 23 ~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~ 85 (538)
T TIGR03208 23 TINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLAR-----------------LGVGRGDVVSFQL 85 (538)
T ss_pred cHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEC
Confidence 678889999999999999985 24689999999999999999998 4999999999999
Q ss_pred CCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH-----HHHHHHHhhcCC--cccccCCCCC
Q 017382 76 KPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSGA--KFSLIPPVPN 148 (372)
Q Consensus 76 ~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~ 148 (372)
+|+++++++++||+++|++++|+++..+.+++.++++.++++++++++... +........... .++..... .
T Consensus 86 ~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 164 (538)
T TIGR03208 86 PNRWEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGD-G 164 (538)
T ss_pred CCCHHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCC-C
Confidence 999999999999999999999999999999999999999999999987542 222222221111 11111110 0
Q ss_pred CCCCccc---c--ccccc----ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecC
Q 017382 149 VSSETTV---F--DQSQA----EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLP 219 (372)
Q Consensus 149 ~~~~~~~---~--~~~~~----~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p 219 (372)
....... . ..... .......++++++|+|||||||.||+|+++|+++...+......++++.+|++++.+|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p 244 (538)
T TIGR03208 165 DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASP 244 (538)
T ss_pred CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCC
Confidence 0000000 0 00000 1112346789999999999999999999999999999888888888999999999999
Q ss_pred chhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhh
Q 017382 220 LHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (372)
Q Consensus 220 l~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~ 299 (372)
++|..++...++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+.... ..
T Consensus 245 l~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~p~~~~~l~~~~~~--------~~ 306 (538)
T TIGR03208 245 MAHQTGFMYGLMMPLILNATAVLQDIWNPARAAEL----------IRETGVTFTMASTPFLTDLCRAVKE--------SG 306 (538)
T ss_pred chhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHH----------HHHhCCeEEecCHHHHHHHHhchhc--------cC
Confidence 99999987778899999999999999999999998 7889999999999999988765321 22
Q ss_pred hhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCCC--CCCCCcccccCCCceEEEeecC
Q 017382 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 300 ~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~--~~~~~svG~p~~g~~i~Ivd~d 372 (372)
.+++++|.+++||+++++++.+++.+.+|+++++.||+||++.+.+..... .....++|+|++|++++|+|++
T Consensus 307 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~ 381 (538)
T TIGR03208 307 APVPSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDAN 381 (538)
T ss_pred CCCCcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCC
Confidence 467899999999999999999999998999999999999998665533221 2234679999999999999864
No 42
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.9e-43 Score=341.96 Aligned_cols=336 Identities=22% Similarity=0.251 Sum_probs=276.2
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.+.++++.+|+++|+.++++.+||+||.+++.++|+.|.+. |+++||+|+++++|++++
T Consensus 12 ~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gi~~~~~V~l~~~~~~~~ 74 (523)
T PRK08316 12 TIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDL-----------------GLKKGDRVAALGHNSDAY 74 (523)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHHH
Confidence 578899999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCC---CC-CCcc---
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN---VS-SETT--- 154 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~--- 154 (372)
+++++||+++|++++|+++.++.+++.++++++++++++++++....+.+................. .. ....
T Consensus 75 ~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (523)
T PRK08316 75 ALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLDFAD 154 (523)
T ss_pred HHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhhHHH
Confidence 9999999999999999999999999999999999999999988776665543322211111100000 00 0000
Q ss_pred ccccc-ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHH
Q 017382 155 VFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (372)
Q Consensus 155 ~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~ 233 (372)
..... ..........+++++++|||||||.||+|.+||.+++.........++++++|+++..+|++|..++...++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~ 234 (523)
T PRK08316 155 WAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPY 234 (523)
T ss_pred HHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHH
Confidence 00000 00112344568899999999999999999999999999888888888899999999999999999986666778
Q ss_pred HHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCC
Q 017382 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (372)
Q Consensus 234 l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~ 313 (372)
+..|+++++.+..+++.+++. ++++++|++.++|+++..+.+... ....+++++|.+++||+
T Consensus 235 ~~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l~~~~~gg~ 296 (523)
T PRK08316 235 LYVGATNVILDAPDPELILRT----------IEAERITSFFAPPTVWISLLRHPD--------FDTRDLSSLRKGYYGAS 296 (523)
T ss_pred HhcCceEEEecCCCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHcCcc--------cccCCcccceEEEEcCC
Confidence 999999999988999999998 788999999999999999887522 23456789999999999
Q ss_pred CCCHHHHHHHHHHh-CCccccccccccccccccCCC--CCCCCCCcccccCCCceEEEeecC
Q 017382 314 ALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL--RGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 314 ~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~--~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+++.++.+.+++.+ +.++++.||+||++.+..... +.....+++|+|+++++++|+|.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~ 358 (523)
T PRK08316 297 IMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDD 358 (523)
T ss_pred cCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCC
Confidence 99999999999988 789999999999987655322 223456899999999999999853
No 43
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-43 Score=339.83 Aligned_cols=322 Identities=21% Similarity=0.289 Sum_probs=265.3
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
|++.+.|.++++.+||++|++++++++||.||.++++++|+.|.+. | .+|++|+++++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------~-~~~~~v~i~~~~~~~ 62 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEK-----------------E-SKNKTIAILLENRIE 62 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHh-----------------C-CCCCEEEEEcCCCHH
Confidence 8899999999999999999999999999999999999999999984 6 479999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (372)
++++++||+++|++++|+++.++++++.++++.++++++|++......+... ...++.+...... ......
T Consensus 63 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~~-----~~~~~~ 133 (487)
T PRK07638 63 FLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE----EGRVIEIDEWKRM-----IEKYLP 133 (487)
T ss_pred HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc----cceEEEehhhhhh-----hhhccc
Confidence 9999999999999999999999999999999999999999998654433211 1111111110000 000001
Q ss_pred cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceE
Q 017382 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (372)
Q Consensus 161 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 240 (372)
.........+++++|+|||||||.||+|+++|++++.++......++++++|+++...|++|..++. .++.++..|+++
T Consensus 134 ~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~-~~~~~l~~g~~~ 212 (487)
T PRK07638 134 TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLY-GAISTLYVGQTV 212 (487)
T ss_pred cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHH-HHHHHHccCcEE
Confidence 1111122346789999999999999999999999999888888888899999999999999998874 688899999999
Q ss_pred EEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHH
Q 017382 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (372)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~ 320 (372)
++.+.+++..+++. ++++++|++.++|+++..+.+.. . ...+.+.++++|++++.+..
T Consensus 213 ~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~-----------~-~~~~~~~~~~~G~~l~~~~~ 270 (487)
T PRK07638 213 HLMRKFIPNQVLDK----------LETENISVMYTVPTMLESLYKEN-----------R-VIENKMKIISSGAKWEAEAK 270 (487)
T ss_pred EEcCCCCHHHHHHH----------HHHcCCeEEEeCcHHHHHHHhCc-----------C-cCCceeEEEEcCCCCCHHHH
Confidence 99999999999998 78899999999999999987641 1 13455667889999999999
Q ss_pred HHHHHHh-CCccccccccccccccccCC-CCCCCCCCcccccCCCceEEEeecC
Q 017382 321 QQWETIT-GHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 321 ~~~~~~~-~~~l~~~YG~tE~~~~~~~~-~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+++.+.+ +..+++.||+||++.++... .....+.+++|+|++|++++|+|.+
T Consensus 271 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 324 (487)
T PRK07638 271 EKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEA 324 (487)
T ss_pred HHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEEEECCC
Confidence 9999998 78999999999998665533 2234567899999999999999864
No 44
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.5e-43 Score=350.19 Aligned_cols=340 Identities=20% Similarity=0.261 Sum_probs=252.2
Q ss_pred HHHHHHHHhCCcCCCceEEEeC----C-----ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 017382 2 EVFKAAYKKGSMARDSVAIRAD----Q-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~----~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (372)
|+++.|.++++++|+++|+... + +++||+|+.++++++|+.|.+ .|+++||+|+
T Consensus 43 t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~-----------------~Gv~~gd~V~ 105 (660)
T PLN02430 43 TAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRA-----------------SGAEPGSRVG 105 (660)
T ss_pred CHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEE
Confidence 6889999999999999999632 1 357999999999999999999 4999999999
Q ss_pred EEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH-HHHHHHHhhcC--CcccccCCCCCC
Q 017382 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-EVLQNVASKSG--AKFSLIPPVPNV 149 (372)
Q Consensus 73 l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~ 149 (372)
|+++|++||+++++||+++|++++|+++.++++++.+++++++++++|+++... +.+........ ..++.+......
T Consensus 106 i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~ 185 (660)
T PLN02430 106 IYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEE 185 (660)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChH
Confidence 999999999999999999999999999999999999999999999999987532 22222111111 111111110000
Q ss_pred ------CCC---ccccc---c-c-ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh-----cccCC
Q 017382 150 ------SSE---TTVFD---Q-S-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA-----WEYTS 210 (372)
Q Consensus 150 ------~~~---~~~~~---~-~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~-----~~~~~ 210 (372)
... ....+ . . .........++++++|+|||||||.||||++||+++...+...... ..++.
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~ 265 (660)
T PLN02430 186 ESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTH 265 (660)
T ss_pred HhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCC
Confidence 000 00000 0 0 0011122357899999999999999999999999999877665432 14678
Q ss_pred CCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhc
Q 017382 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (372)
Q Consensus 211 ~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~ 290 (372)
+|++++++|++|+++... .+.++..|+++++.+. ++..+++. ++++++|++.++|.+++.+.+.....
T Consensus 266 ~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~----------l~~~~pt~~~~vP~~~~~l~~~i~~~ 333 (660)
T PLN02430 266 DDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-DLNALRDD----------LMELKPTLLAGVPRVFERIHEGIQKA 333 (660)
T ss_pred CCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHH----------HHHhCCcEEEecHHHHHHHHHHHHHH
Confidence 999999999999999875 4556889999988754 67777777 77889999999999999887642110
Q ss_pred ----cH---------------------------------HHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCcccc
Q 017382 291 ----DT---------------------------------ELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLE 333 (372)
Q Consensus 291 ----~~---------------------------------~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~ 333 (372)
.. ..........+++|.+++||+++++++.+.++...+..+++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~ 413 (660)
T PLN02430 334 LQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQ 413 (660)
T ss_pred HhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeee
Confidence 00 00011111237899999999999999866555443468999
Q ss_pred ccccccccccccCC-CCCCCCCCcccccCCCceEEEee
Q 017382 334 RYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 334 ~YG~tE~~~~~~~~-~~~~~~~~svG~p~~g~~i~Ivd 370 (372)
+||+||++++++.. .......+++|+|++|+++||+|
T Consensus 414 ~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d 451 (660)
T PLN02430 414 GYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEE 451 (660)
T ss_pred ecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEE
Confidence 99999988655433 22234579999999999999987
No 45
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=2.5e-43 Score=346.24 Aligned_cols=328 Identities=22% Similarity=0.295 Sum_probs=254.3
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCc----------eeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCE
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQK----------SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGAR 70 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~----------~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~ 70 (372)
+|+.+.+.++++++|+++|+++.+. ++||+||.++++++|+.|.+ .|+++||+
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~-----------------~g~~~gd~ 68 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA-----------------AGIGRGMR 68 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCE
Confidence 4788899999999999999998554 89999999999999999999 49999999
Q ss_pred EEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc--hHHHHHHHHhhcCCcccccCCC--
Q 017382 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED--YREVLQNVASKSGAKFSLIPPV-- 146 (372)
Q Consensus 71 V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 146 (372)
|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++|+++. ..+.+...........+.+...
T Consensus 69 V~~~~~n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 148 (552)
T PRK09274 69 AVLMVTPSLEFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLL 148 (552)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccc
Confidence 999999999999999999999999999999999999999999999999999752 2222211100000011111110
Q ss_pred CCCCCCcccccc--cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHH
Q 017382 147 PNVSSETTVFDQ--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVH 224 (372)
Q Consensus 147 ~~~~~~~~~~~~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 224 (372)
............ ..........++++++|+|||||||.||+|++||+++...+......+++.++|+.++..|++|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~ 228 (552)
T PRK09274 149 WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALF 228 (552)
T ss_pred cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhh
Confidence 000000000000 001112234568999999999999999999999999999988888888999999999999998764
Q ss_pred HHHHHHHHHHHcCceEEEcC-------CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHh
Q 017382 225 GLFNALLAPLYAGATVEFMP-------KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (372)
Q Consensus 225 ~~~~~~~~~l~~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~ 297 (372)
+ +..|+++++.+ .+++..+++. ++++++|+++++|+++..+.+... .
T Consensus 229 ~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~--------~ 282 (552)
T PRK09274 229 G--------PALGMTSVIPDMDPTRPATVDPAKLFAA----------IERYGVTNLFGSPALLERLGRYGE--------A 282 (552)
T ss_pred h--------hhhCCeEEecCcccccccccCHHHHHHH----------HHHcCCeEEeccHHHHHHHHHHhh--------h
Confidence 3 34577877764 4578888888 888999999999999999987522 2
Q ss_pred hhhhccCceEEEecCCCCCHHHHHHHHHHh--CCccccccccccccccccCCCCC----------CCCCCcccccCCCce
Q 017382 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAISNPLRG----------ARKAGTVGNPLPGVQ 365 (372)
Q Consensus 298 ~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~~----------~~~~~svG~p~~g~~ 365 (372)
...+++++|.+++||+++++++.+.|.+.| |+++++.||+||++.+++..... .....++|+|+||++
T Consensus 283 ~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~ 362 (552)
T PRK09274 283 NGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVE 362 (552)
T ss_pred cCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCce
Confidence 334788999999999999999999999999 46999999999998654422111 122347999999999
Q ss_pred EEEeec
Q 017382 366 VSMILL 371 (372)
Q Consensus 366 i~Ivd~ 371 (372)
++|+|.
T Consensus 363 ~~ivd~ 368 (552)
T PRK09274 363 VRIIAI 368 (552)
T ss_pred EEEEec
Confidence 999984
No 46
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=7.1e-43 Score=341.94 Aligned_cols=333 Identities=23% Similarity=0.321 Sum_probs=271.5
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+++.+.|.++++.+||++|++++++.+||+||.+++.++|..|.+ .|+++|++|+++++|+++
T Consensus 21 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~-----------------~gi~~g~~V~v~~~n~~~ 83 (542)
T PRK06155 21 RTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAA-----------------AGVKRGDRVALMCGNRIE 83 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChH
Confidence 367889999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhc-C-CcccccCCCCCCCCC-----c
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKS-G-AKFSLIPPVPNVSSE-----T 153 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~-----~ 153 (372)
++++++||+++|++++|+++.++.+++.++++++++++++++.+....+.+..... . ...+.+......... .
T Consensus 84 ~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (542)
T PRK06155 84 FLDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWSTA 163 (542)
T ss_pred HHHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccchh
Confidence 99999999999999999999999999999999999999999987776665543221 1 111111111100000 0
Q ss_pred ccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHH
Q 017382 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (372)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~ 233 (372)
...............++++++|+|||||||.||+|+++|+++..........+++++++++++..|++|..++. .++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~-~~~~~ 242 (542)
T PRK06155 164 PLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALN-AFFQA 242 (542)
T ss_pred hhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHH-HHHHH
Confidence 00000000112234568999999999999999999999999998887777888899999999999999999986 57889
Q ss_pred HHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCC
Q 017382 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (372)
Q Consensus 234 l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~ 313 (372)
+..|+++++.+.+++..++.. ++++++|++.++|+++..+.+.... .....+++|.++.||
T Consensus 243 l~~G~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~--------~~~~~~~l~~~~~g~- 303 (542)
T PRK06155 243 LLAGATYVLEPRFSASGFWPA----------VRRHGATVTYLLGAMVSILLSQPAR--------ESDRAHRVRVALGPG- 303 (542)
T ss_pred HHcCceEEeeCCCCHHHHHHH----------HHHhCCcEEEchHHHHHHHHcCcCc--------cccccCceEEEEEcC-
Confidence 999999999999999999999 7889999999999999988765321 223557899887665
Q ss_pred CCCHHHHHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeecC
Q 017382 314 ALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 314 ~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
.++.+.+.|.+.+|.++++.||+||++.++.... ...+.+++|.|++|++++|+|.+
T Consensus 304 -~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~-~~~~~~~vG~~~~~~~~~i~d~~ 360 (542)
T PRK06155 304 -VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTH-GSQRPGSMGRLAPGFEARVVDEH 360 (542)
T ss_pred -CCHHHHHHHHHHcCCCEEeeecccccCccccCCC-CCCCCCCcCccCCCceEEEECCC
Confidence 5788999999999999999999999987665432 24567889999999999999864
No 47
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-43 Score=339.37 Aligned_cols=331 Identities=18% Similarity=0.267 Sum_probs=270.2
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
|++.+.+.++++.+|+++|++++++.+||.||.++++++|..|.+. |+++|++|+++++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~-----------------g~~~~~~v~i~~~~~~~ 64 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHAR-----------------GIGQGDVVALLMKNSAA 64 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 6889999999999999999999999999999999999999999994 99999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccc-ccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVF-DQS 159 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 159 (372)
+++.++|++++|++++|+++..+.+++.++++.+++++++++++....... ......++.... ....... ...
T Consensus 65 ~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~ 138 (497)
T PRK06145 65 FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-----ETPKIVIDAAAQ-ADSRRLAQGGL 138 (497)
T ss_pred HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-----ccceEEecCccc-chhHHHhccCC
Confidence 999999999999999999999999999999999999999998765433211 111111111000 0000000 000
Q ss_pred ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCce
Q 017382 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (372)
Q Consensus 160 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~ 239 (372)
.........++++++++|||||||.||+|.+||+++...+......+++..+|+++...|++|..++....+.++..|++
T Consensus 139 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~ 218 (497)
T PRK06145 139 EIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGT 218 (497)
T ss_pred CCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCE
Confidence 01112234678999999999999999999999999987776666777889999999999999999887666778999999
Q ss_pred EEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHH
Q 017382 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (372)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~ 319 (372)
+++.+.+++..+++. ++++++|++.++|+++..++.... ....+++++|.+++||+++++++
T Consensus 219 ~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~ll~~~~--------~~~~~~~~l~~~~~gG~~~~~~~ 280 (497)
T PRK06145 219 LRIHREFDPEAVLAA----------IERHRLTCAWMAPVMLSRVLTVPD--------RDRFDLDSLAWCIGGGEKTPESR 280 (497)
T ss_pred EEECCcCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHcCCC--------ccccccccceEEEecCCCCCHHH
Confidence 999999999999998 788999999999999999886522 12346688999999999999999
Q ss_pred HHHHHHHh-CCccccccccccccccccCCC--CCCCCCCcccccCCCceEEEeecC
Q 017382 320 MQQWETIT-GHRLLERYGMTEFVMAISNPL--RGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 320 ~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~--~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
++.|.+.| +.++++.||+||++...+... ....+.+++|+|+++++++|+|++
T Consensus 281 ~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~ 336 (497)
T PRK06145 281 IRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGA 336 (497)
T ss_pred HHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCC
Confidence 99999988 678999999999986544221 122356789999999999999864
No 48
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-43 Score=344.86 Aligned_cols=333 Identities=20% Similarity=0.269 Sum_probs=255.0
Q ss_pred HHHHHHHHhCCcCCCceEEEe--CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
|+.+.|.++++++|+++|++. +++.+||+||.++++++|+.|.+ .|+++||+|+++++|++
T Consensus 15 ~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~~~~~ 77 (540)
T PRK05857 15 TVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRA-----------------QSVSRGSRVLVISDNGP 77 (540)
T ss_pred chHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHH-----------------hCcCCCCEEEEEcCCCH
Confidence 578899999999999999985 34689999999999999999999 49999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhc-CCcccccCCCCCCCCCcccccc
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKS-GAKFSLIPPVPNVSSETTVFDQ 158 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 158 (372)
++++++|||+++|++++|+++.++.+++.++++.++++.+++++........+.... ....+.++..............
T Consensus 78 e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (540)
T PRK05857 78 ETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDA 157 (540)
T ss_pred HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeecccccccccccccc
Confidence 999999999999999999999999999999999999999999976532221111100 0111111110000000000000
Q ss_pred cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHh----hcccCCCCeEEEecCchhHHHHHHHHHHHH
Q 017382 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEYTSADQFLHCLPLHHVHGLFNALLAPL 234 (372)
Q Consensus 159 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l 234 (372)
..........++++++++|||||||.||||.++|+++..+...... .+....+++++..+|++|..+++ ..+.++
T Consensus 158 ~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l 236 (540)
T PRK05857 158 ASLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCL 236 (540)
T ss_pred cccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHh
Confidence 0001122345689999999999999999999999999876544322 23556788999999999999986 577789
Q ss_pred HcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCC
Q 017382 235 YAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (372)
Q Consensus 235 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~ 314 (372)
+.|+++++ ...++..+++. ++++++|+++++|+++..+.+.... ...+++++|.+++||++
T Consensus 237 ~~G~~~v~-~~~~~~~~~~~----------i~~~~it~~~~~P~~~~~l~~~~~~--------~~~~~~~lr~~~~gG~~ 297 (540)
T PRK05857 237 MHGGLCVT-GGENTTSLLEI----------LTTNAVATTCLVPTLLSKLVSELKS--------ANATVPSLRLVGYGGSR 297 (540)
T ss_pred hcceeEEe-cCCChhHHHHH----------HHhcCcceEEeChHHHHHHHhcccc--------CCCcCccceEEEEcCcc
Confidence 99998876 45678888888 8899999999999999999875321 23467899999999999
Q ss_pred CCHHHHHHHHHHhCCccccccccccccccccCCC-CC----CCCCCcccccCCCceEEEeecC
Q 017382 315 LPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RG----ARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 315 ~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~----~~~~~svG~p~~g~~i~Ivd~d 372 (372)
++....+ |.+.+|.++++.||+||++....... .. ..+.+++|+|++|++++|+|.|
T Consensus 298 ~~~~~~~-~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~ 359 (540)
T PRK05857 298 AIAADVR-FIEATGVRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATD 359 (540)
T ss_pred CCchhHH-HHHHhCCeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECcc
Confidence 9887775 55677999999999999985433211 11 2356899999999999999854
No 49
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-43 Score=353.96 Aligned_cols=321 Identities=20% Similarity=0.246 Sum_probs=259.1
Q ss_pred HHHHHHHHhCCc--CCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 2 EVFKAAYKKGSM--ARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 2 ~~~~~l~~~a~~--~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
|+.+.+.++++. +||++|++.. ..+||+||.++++++|+.|.+ .|+++||+|+++++|++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~-----------------~g~~~g~~V~i~~~~~~ 66 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRN-----------------RGLSSGDRVLLCLPDSP 66 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCH
Confidence 577888888875 7999999874 489999999999999999999 49999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccc
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQS 159 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (372)
+++++++||+++|++++|++|.++.+++.+++++++++++|++....+.+... ....... .... . ...
T Consensus 67 ~~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~~~--~~~~---~-~~~ 134 (705)
T PRK06060 67 DLVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS------RVAEAAE--LMSE---A-ARV 134 (705)
T ss_pred HHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc------ccchhhh--hhhh---c-ccc
Confidence 99999999999999999999999999999999999999999987654332110 0000000 0000 0 000
Q ss_pred ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHH-hhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCc
Q 017382 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT-EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (372)
Q Consensus 160 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~-~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~ 238 (372)
.........++++++|+|||||||.||+|+++|+++...+.... ..+.+...|++++..|++|..++...++.++..|+
T Consensus 135 ~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~ 214 (705)
T PRK06060 135 APGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGG 214 (705)
T ss_pred CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCC
Confidence 00011123568899999999999999999999999988776654 45778899999999999999887666788899999
Q ss_pred eEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCH
Q 017382 239 TVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (372)
Q Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~ 317 (372)
++++.+ .+++..++.. ++++++|+++++|+++..+++... ..+++++|.+++||+++++
T Consensus 215 ~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~----------~~~~~slr~i~~gGe~l~~ 274 (705)
T PRK06060 215 SAVINSAPVTPEAAAIL----------SARFGPSVLYGVPNFFARVIDSCS----------PDSFRSLRCVVSAGEALEL 274 (705)
T ss_pred EEEEeCCCCCHHHHHHH----------HHhcCCeEEeeHHHHHHHHHHhcc----------cccccceeEEEEecCcCCH
Confidence 999987 4677777766 788999999999999998876421 2356899999999999999
Q ss_pred HHHHHHHHHh-CCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeecC
Q 017382 318 PVMQQWETIT-GHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 318 ~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
++.+.|.+.| +.+++|.||+||++...........+.+++|+|+++++++|+|.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~ 330 (705)
T PRK06060 275 GLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVDEWRLGTLGRVLPPYEIRVVAPD 330 (705)
T ss_pred HHHHHHHHHcCCCceEeeeeccccCceEEeccCCCCCcCcccccCCCcEEEEECCC
Confidence 9999999988 589999999999985544332223456889999999999999864
No 50
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=9.8e-43 Score=340.14 Aligned_cols=337 Identities=19% Similarity=0.204 Sum_probs=268.9
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+++.+.+.++++.+|+++|++++++.+||+||.++++++|..|.+ +|+++||+|+++++|+++
T Consensus 23 ~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~~~~~~ 85 (527)
T TIGR02275 23 KPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTK-----------------LGIGQGDTAVVQLPNIAE 85 (527)
T ss_pred CcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCcHH
Confidence 367889999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH-----HHHHHHHhhcC-CcccccCCCCC-CCCCc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG-AKFSLIPPVPN-VSSET 153 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~-~~~~~ 153 (372)
++++++|++++|++++++++..+.+++.++++.+++++++++.... +.......... .....+..... .....
T Consensus 86 ~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (527)
T TIGR02275 86 FYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAELF 165 (527)
T ss_pred HHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcchhh
Confidence 9999999999999999999999999999999999999999986531 11122211111 11111111000 00000
Q ss_pred ccc-cccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH-HHH
Q 017382 154 TVF-DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALL 231 (372)
Q Consensus 154 ~~~-~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~-~~~ 231 (372)
... ............++++++|+|||||||.||+|++||.++..++......+.+..+|++++.+|++|.+++.. .++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~ 245 (527)
T TIGR02275 166 LWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGAL 245 (527)
T ss_pred HHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHH
Confidence 000 000111123456789999999999999999999999999998888888888999999999999999998864 477
Q ss_pred HHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEec
Q 017382 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (372)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~g 311 (372)
.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+... ....+++++|.+++|
T Consensus 246 ~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~--------~~~~~~~~lr~~~~g 307 (527)
T TIGR02275 246 GVFYAGGCVVLAPDPSPTDCFPL----------IERHKVTVTALVPPAVALWMQAAS--------KSRYDLSSLKLLQVG 307 (527)
T ss_pred HHHhcCCeEEECCCCCHHHHHHH----------HHHhCCeEEEecHHHHHHHHhCcc--------ccCCCccceEEEEEc
Confidence 88999999999998999998888 788999999999999998877532 123467899999999
Q ss_pred CCCCCHHHHHHHHHHhCCccccccccccccccccCC-CCCCCCCCcccccC-CCceEEEeecC
Q 017382 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPL-PGVQVSMILLL 372 (372)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~~~~~~svG~p~-~g~~i~Ivd~d 372 (372)
|+++++++.+.+.+.+|.++++.||+||++...... .......+++|+|+ ++++++|+|.+
T Consensus 308 G~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~ 370 (527)
T TIGR02275 308 GAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDH 370 (527)
T ss_pred CCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCC
Confidence 999999999999999999999999999966433321 11233457899999 58999999864
No 51
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=2e-42 Score=340.19 Aligned_cols=330 Identities=22% Similarity=0.290 Sum_probs=259.6
Q ss_pred HHHHHHHhCCcCCCceEEEeCC--ceeeHHHHHHHHHHHHHHHhh-CCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 3 VFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCS-NDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 3 ~~~~l~~~a~~~~~~~al~~~~--~~~Ty~el~~~~~~la~~L~~-~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
+.+.+... ..+|+++|++++. .++||+||.++++++|+.|.+ . |+++||+|+++++|++
T Consensus 42 ~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~-----------------G~~~gd~V~i~~~n~~ 103 (560)
T PLN02574 42 AVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVM-----------------GVRQGDVVLLLLPNSV 103 (560)
T ss_pred HHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEECCCcc
Confidence 33445554 5789999999753 479999999999999999997 5 9999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCC----Cccc
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSS----ETTV 155 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 155 (372)
+++++++||+++|++++|++|..+.+++.++++.+++++++++++..+.+... ....+.+........ ....
T Consensus 104 ~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PLN02574 104 YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL----GVPVIGVPENYDFDSKRIEFPKF 179 (560)
T ss_pred hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc----CCcEEecCcccccccCccCcccH
Confidence 99999999999999999999999999999999999999999998765554332 111111111000000 0000
Q ss_pred ---c-cccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHh----hccc-CCCCeEEEecCchhHHHH
Q 017382 156 ---F-DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE----AWEY-TSADQFLHCLPLHHVHGL 226 (372)
Q Consensus 156 ---~-~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~----~~~~-~~~d~~l~~~pl~~~~~~ 226 (372)
. ............++++++|+|||||||.||+|++||+++...+..+.. .+.. ...++++..+|++|..++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~ 259 (560)
T PLN02574 180 YELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGL 259 (560)
T ss_pred HHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHH
Confidence 0 000011122345689999999999999999999999999887766543 1222 356888999999999998
Q ss_pred HHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCce
Q 017382 227 FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLR 306 (372)
Q Consensus 227 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr 306 (372)
...++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+... .....+++++|
T Consensus 260 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~-------~~~~~~~~~lr 322 (560)
T PLN02574 260 SLFVVGLLSLGSTIVVMRRFDASDMVKV----------IDRFKVTHFPVVPPILMALTKKAK-------GVCGEVLKSLK 322 (560)
T ss_pred HHHHHHHHhcCCEEEEecCCCHHHHHHH----------HHHcCCeEEecCCHHHHHHHhCcc-------ccccCccccce
Confidence 7667788899999999999999999998 888999999999999999987521 11235688999
Q ss_pred EEEecCCCCCHHHHHHHHHHh-CCccccccccccccccccCC--CCCCCCCCcccccCCCceEEEeec
Q 017382 307 LMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 307 ~v~~gG~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~--~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
.+++||++++++++++|.+.+ +..+++.||+||++.+.+.. .....+.+++|+|++|++++|+|.
T Consensus 323 ~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~ 390 (560)
T PLN02574 323 QVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDW 390 (560)
T ss_pred EEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeC
Confidence 999999999999999999988 78999999999998655422 222345689999999999999994
No 52
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=3.8e-42 Score=337.55 Aligned_cols=335 Identities=22% Similarity=0.323 Sum_probs=267.8
Q ss_pred HHHHHHHHhCCcCCCceEEEeCC-ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~-~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
|+.+.+.++++.+||++|++++. +.+||+||.++++++|+.|.+ .|+++||+|+++++|+++
T Consensus 24 ~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~-----------------~G~~~gd~V~i~~~n~~~ 86 (547)
T PRK06087 24 SLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLA-----------------KGIEPGDRVAFQLPGWCE 86 (547)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHH
Confidence 57788999999999999999865 899999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc-----hHHHHHHHHhhcCC--cccccCCCCCCCCCc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-----YREVLQNVASKSGA--KFSLIPPVPNVSSET 153 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 153 (372)
++++++||+++|++++|+++.++.+++.++++.++++++++++. ..+.+......... ..+.+..........
T Consensus 87 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (547)
T PRK06087 87 FTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSSL 166 (547)
T ss_pred HHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCcc
Confidence 99999999999999999999999999999999999999999753 22333333222221 111111111000000
Q ss_pred cc---cccc-ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHH
Q 017382 154 TV---FDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNA 229 (372)
Q Consensus 154 ~~---~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~ 229 (372)
.. .... ..........+++++|+|||||||.||+|.++|.++..........+.+.++|++++..|++|..+++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 246 (547)
T PRK06087 167 SLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHG 246 (547)
T ss_pred CHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHH
Confidence 00 0000 0011223456899999999999999999999999999888887777888999999999999999998878
Q ss_pred HHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEE
Q 017382 230 LLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (372)
Q Consensus 230 ~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~ 309 (372)
++.+++.|+++++.+.+++..+++. ++++++|+++++|+.+..+++... ....+++++|.++
T Consensus 247 ~~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~~l~~~~--------~~~~~~~~lr~i~ 308 (547)
T PRK06087 247 VTAPFLIGARSVLLDIFTPDACLAL----------LEQQRCTCMLGATPFIYDLLNLLE--------KQPADLSALRFFL 308 (547)
T ss_pred HHHHHhcCCEEEecCCCCHHHHHHH----------HHHcCCCEEeccHHHHHHHHhccc--------cCCCCCCCeEEEE
Confidence 8899999999999999999999998 788999999988888777766422 1234678999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCCC--CCCCCcccccCCCceEEEeecC
Q 017382 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 310 ~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~--~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+||+++++++.+.+.+. |+++++.||+||++.+....... ....+++|+|++|++++|+|.+
T Consensus 309 ~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 372 (547)
T PRK06087 309 CGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEA 372 (547)
T ss_pred EcCCCCCHHHHHHHHHc-CCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCC
Confidence 99999999999988765 99999999999998765533322 2345679999999999999864
No 53
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-42 Score=337.25 Aligned_cols=334 Identities=24% Similarity=0.310 Sum_probs=270.1
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
|+.+.|.++++++|+++|++++++.+||.||.+++.+++..|.+ .|+++|++|+++++|++++
T Consensus 13 ~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gv~~~~~V~i~~~~~~~~ 75 (524)
T PRK06188 13 TYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEA-----------------LGLGTGDAVALLSLNRPEV 75 (524)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHH
Confidence 67788999999999999999999999999999999999999999 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc-hHHHHHHHHhhcCC--cccccCCCCCCCCCccccc-
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-YREVLQNVASKSGA--KFSLIPPVPNVSSETTVFD- 157 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~- 157 (372)
++.++||+++|++++|+++..+.+++.++++.++++.+++++. .............. ..+.+..............
T Consensus 76 ~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (524)
T PRK06188 76 LMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAAAAK 155 (524)
T ss_pred HHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHhhhc
Confidence 9999999999999999999999999999999999999999876 33333332222211 1111111110000000000
Q ss_pred ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcC
Q 017382 158 QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (372)
Q Consensus 158 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G 237 (372)
...........++++++|+|||||||.||+|.++|.++...+......+.+..+|++++..|++|..++. ++.+++.|
T Consensus 156 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~--~~~~l~~G 233 (524)
T PRK06188 156 FGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF--FLPTLLRG 233 (524)
T ss_pred cCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH--HHHHHHcC
Confidence 0000111223456799999999999999999999999999988888888999999999999999998874 57789999
Q ss_pred ceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCH
Q 017382 238 ATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (372)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~ 317 (372)
+++++.+.+++..+++. ++++++|++.++|+++..+++.... ...+++++|.+++||+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~~--------~~~~l~~lr~~~~gg~~~~~ 295 (524)
T PRK06188 234 GTVIVLAKFDPAEVLRA----------IEEQRITATFLVPTMIYALLDHPDL--------RTRDLSSLETVYYGASPMSP 295 (524)
T ss_pred CEEEEcCCCCHHHHHHH----------HHHhCCEEEEehHHHHHHHHhCcCc--------cCCCCcceeEEEEcCCCCCH
Confidence 99999999999999988 7889999999999999999876321 23467899999999999999
Q ss_pred HHHHHHHHHhCCccccccccccccccccCCCC------CCCCCCcccccCCCceEEEeecC
Q 017382 318 PVMQQWETITGHRLLERYGMTEFVMAISNPLR------GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 318 ~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~------~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+..+.+.+.++..+++.||+||++..++.... .....+++|+|++|++++|+|++
T Consensus 296 ~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~ 356 (524)
T PRK06188 296 VRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDED 356 (524)
T ss_pred HHHHHHHHHhCchhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCC
Confidence 99999998899999999999999755442211 12356789999999999999864
No 54
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=5e-42 Score=337.59 Aligned_cols=337 Identities=23% Similarity=0.274 Sum_probs=268.6
Q ss_pred CHHHHHHHHhCCcCCCceEEEe--CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC
Q 017382 1 MEVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~ 78 (372)
+++.+.|.+.++.+|+++|+++ +++++||+||.++++++|+.|.+. |+++||+|+++++|+
T Consensus 16 ~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~-----------------gi~~g~~V~i~~~~~ 78 (559)
T PRK08315 16 QTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLAL-----------------GIEKGDRVGIWAPNV 78 (559)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCC
Confidence 4688999999999999999987 567899999999999999999984 999999999999999
Q ss_pred HhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH-----HHHHHHHhhcC---------------C
Q 017382 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG---------------A 138 (372)
Q Consensus 79 ~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~---------------~ 138 (372)
++++++++||+++|++++|+++..+.+++..+++++++++++++++.. +.+.+...... .
T Consensus 79 ~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (559)
T PRK08315 79 PEWVLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELR 158 (559)
T ss_pred hHHHHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCce
Confidence 999999999999999999999999999999999999999999987532 22222211110 0
Q ss_pred cccccCCCCC--CCCCccccc-------ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccC
Q 017382 139 KFSLIPPVPN--VSSETTVFD-------QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT 209 (372)
Q Consensus 139 ~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~ 209 (372)
.......... ......... ...........++++++++|||||||.||+|.+||+++..++......+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~ 238 (559)
T PRK08315 159 RVIFLGDEKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLT 238 (559)
T ss_pred eEEeecccCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCC
Confidence 0000000000 000000000 0000112234568899999999999999999999999999888888888999
Q ss_pred CCCeEEEecCchhHHHHHHHHHHHHHcCceEEE-cCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhh
Q 017382 210 SADQFLHCLPLHHVHGLFNALLAPLYAGATVEF-MPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (372)
Q Consensus 210 ~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 288 (372)
.+|+++..+|++|..+++..++.++..|+++++ ...+++..+++. ++++++|+++++|+++..++...
T Consensus 239 ~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~~~~~~- 307 (559)
T PRK08315 239 EEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAA----------VEEERCTALYGVPTMFIAELDHP- 307 (559)
T ss_pred CCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHH----------HHHcCCeEEecchHHHHHHHhCc-
Confidence 999999999999999998888999999999984 456889999888 78899999999999998887642
Q ss_pred hccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCC-ccccccccccccccccCCCCC---CCCCCcccccCCCc
Q 017382 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRG---ARKAGTVGNPLPGV 364 (372)
Q Consensus 289 ~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~~~---~~~~~svG~p~~g~ 364 (372)
.....+++++|.+++||++++.++++.+.+.++. ++++.||+||++.+++..... ..+..++|+|++|+
T Consensus 308 -------~~~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~ 380 (559)
T PRK08315 308 -------DFARFDLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHL 380 (559)
T ss_pred -------ccCCCCchhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCc
Confidence 1223467899999999999999999999998875 499999999998765533221 23568999999999
Q ss_pred eEEEeecC
Q 017382 365 QVSMILLL 372 (372)
Q Consensus 365 ~i~Ivd~d 372 (372)
+++|+|.+
T Consensus 381 ~v~i~d~~ 388 (559)
T PRK08315 381 EVKIVDPE 388 (559)
T ss_pred EEEEEcCc
Confidence 99999864
No 55
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-42 Score=335.72 Aligned_cols=325 Identities=21% Similarity=0.295 Sum_probs=261.8
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+|+++.+.++++.+|+++|++++++.+||+||.++++++|+.|.+. |+++||+|+++++|+++
T Consensus 35 ~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~-----------------gi~~g~~V~i~~~~~~~ 97 (516)
T PRK13383 35 TNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRD-----------------GVAPGRAVGVMCRNGRG 97 (516)
T ss_pred CcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhc-----------------CCCCCCEEEEECCCCHH
Confidence 4678889999999999999999999999999999999999999984 99999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (372)
++++++|++++|++++|+++.++.+++.+++++++++.+++++...+.+..... ....+..... .. ...
T Consensus 98 ~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~----~~~~~~~~~~-----~~-~~~- 166 (516)
T PRK13383 98 FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADD----AVAVIDPATA-----GA-EES- 166 (516)
T ss_pred HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhc----ceEEeccchh-----hh-hcC-
Confidence 999999999999999999999999999999999999999999876655443321 1111111000 00 000
Q ss_pred cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHH--HHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCc
Q 017382 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSID--AQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (372)
Q Consensus 161 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~--~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~ 238 (372)
.......++.++|+|||||||.||+|.++|.... .........+++..+|+++..+|++|.+++. .++.++..|+
T Consensus 167 --~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~ 243 (516)
T PRK13383 167 --GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLG-MLMLTIALGG 243 (516)
T ss_pred --CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHH-HHHHHHhcCC
Confidence 0011234567899999999999999999997432 1122233455778899999999999999986 4777899999
Q ss_pred eEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHH
Q 017382 239 TVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (372)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~ 318 (372)
++++.+.+++..+++. ++++++|.+.++|+++..+.+..... ....+++++|.+++||++++++
T Consensus 244 ~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~gG~~l~~~ 307 (516)
T PRK13383 244 TVLTHRHFDAEAALAQ----------ASLHRADAFTAVPVVLARILELPPRV------RARNPLPQLRVVMSSGDRLDPT 307 (516)
T ss_pred EEEECCCCCHHHHHHH----------HHHhCCcEEEecHHHHHHHHhccccc------cccCCCCceEEEEECCCCCCHH
Confidence 9999999999999988 78899999999999999987642210 0123568999999999999999
Q ss_pred HHHHHHHHhCCccccccccccccccccCCC-CCCCCCCcccccCCCceEEEeecC
Q 017382 319 VMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 319 ~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+.+.|.+.||.++++.||+||++..+.... ......+++|+|+||++++|+|.+
T Consensus 308 ~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 362 (516)
T PRK13383 308 LGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRN 362 (516)
T ss_pred HHHHHHHHcCchhhhcccccccccceeccccccccCCCcccCCCCCcEEEEECCC
Confidence 999999999999999999999986554322 223456889999999999999853
No 56
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-42 Score=335.32 Aligned_cols=338 Identities=22% Similarity=0.251 Sum_probs=261.3
Q ss_pred HHHHHHHHhCCcCCCceEEEeCC--ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
++.+.+..+++++|+++|+++++ +.+||+||.++++++|+.|.+ .|+++||+|+++++|++
T Consensus 17 ~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gv~~gd~V~i~~~n~~ 79 (534)
T PRK05852 17 RIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTR-----------------SGLLPGDRVALRMGSNA 79 (534)
T ss_pred cHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCcH
Confidence 57788999999999999998743 579999999999999999999 49999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCC-----CCCCCc-
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVP-----NVSSET- 153 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~- 153 (372)
+++++++||+++|++++|+++.++.+++.++++.++++++|++....................+.... ......
T Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (534)
T PRK05852 80 EFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLSVHLD 159 (534)
T ss_pred HHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccccccc
Confidence 99999999999999999999999999999999999999999886432211100000000000110000 000000
Q ss_pred ccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHH
Q 017382 154 TVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAP 233 (372)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~ 233 (372)
................++.++|+|||||||.||+|.++|+++...+......+.++.+|+++++.|++|..++...++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~ 239 (534)
T PRK05852 160 AATEPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALLAT 239 (534)
T ss_pred cccCCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHHHH
Confidence 00000000011112246889999999999999999999999999988888888899999999999999999998888999
Q ss_pred HHcCceEEEcC--CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEec
Q 017382 234 LYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (372)
Q Consensus 234 l~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~g 311 (372)
++.|+++++.+ .+++..+++. ++++++|.++++|+++..+.+..... ....+.+++|.+.++
T Consensus 240 l~~g~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~~------~~~~~~~~lr~i~~~ 303 (534)
T PRK05852 240 LASGGAVLLPARGRFSAHTFWDD----------IKAVGATWYTAVPTIHQILLERAATE------PSGRKPAALRFIRSC 303 (534)
T ss_pred HhcCCeEEeCCCcCcCHHHHHHH----------HHHcCCcEEEcChHHHHHHHhhcccc------cccccCCCeeEEEEC
Confidence 99999999865 4788888988 78899999999999999998753221 112356899999999
Q ss_pred CCCCCHHHHHHHHHHhCCccccccccccccccccCCCC-----CCCCCCccccc--CCCceEEEeecC
Q 017382 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-----GARKAGTVGNP--LPGVQVSMILLL 372 (372)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-----~~~~~~svG~p--~~g~~i~Ivd~d 372 (372)
|+++++++++.|.+.|+.++++.||+||++..++.... ......++|.+ .+|++++|+|+|
T Consensus 304 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~~ 371 (534)
T PRK05852 304 SAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGSD 371 (534)
T ss_pred CCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEECCC
Confidence 99999999999999999999999999999865543211 11112334444 799999999875
No 57
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.4e-42 Score=367.82 Aligned_cols=335 Identities=25% Similarity=0.369 Sum_probs=270.5
Q ss_pred HHHHHHHHhCCcCCCceEEEeC-CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 2 EVFKAAYKKGSMARDSVAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~-~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
++.+.+.++++++|+++|+++. ++++||+||.++++++|+.|.+ ++++||+|+++++|+++
T Consensus 616 ~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~------------------~~~~g~~V~i~~~n~~~ 677 (1146)
T PRK08633 616 PLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR------------------ELKDEENVGILLPPSVA 677 (1146)
T ss_pred CHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH------------------hCCCCCeEEEECCCchH
Confidence 5778899999999999999974 6899999999999999999987 68999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHh--hcC--CcccccCCCCC-CCCCccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS--KSG--AKFSLIPPVPN-VSSETTV 155 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~-~~~~~~~ 155 (372)
++++++||+++|++++|+++..+++++.++++++++++++++++..+.+.+... ... ........... .......
T Consensus 678 ~~~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1146)
T PRK08633 678 GALANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISKVDKL 757 (1146)
T ss_pred HHHHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccchhHHH
Confidence 999999999999999999999999999999999999999999876665542110 000 11111111000 0000000
Q ss_pred cc---c--ccc---cc--ccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHH
Q 017382 156 FD---Q--SQA---EK--MDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHG 225 (372)
Q Consensus 156 ~~---~--~~~---~~--~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~ 225 (372)
.. . .+. .. .....++|+++|+|||||||.||+|.+||+++..++......+++.++|++++.+|++|..+
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g 837 (1146)
T PRK08633 758 TALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFG 837 (1146)
T ss_pred HHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHh
Confidence 00 0 000 00 13446789999999999999999999999999999888888888999999999999999999
Q ss_pred HHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccC
Q 017382 226 LFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304 (372)
Q Consensus 226 ~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~ 304 (372)
+...++.++..|+++++.+ .++++.+++. ++++++|++.++|++++.+.+.. ...+.++++
T Consensus 838 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~--------~~~~~~~~~ 899 (1146)
T PRK08633 838 LTVTLWLPLLEGIKVVYHPDPTDALGIAKL----------VAKHRATILLGTPTFLRLYLRNK--------KLHPLMFAS 899 (1146)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhcc--------ccCcccCCC
Confidence 9777888999999999876 4788888888 88899999999999999887742 223457789
Q ss_pred ceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCC-C---------CCCCCCcccccCCCceEEEeecC
Q 017382 305 LRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-R---------GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 305 lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~---------~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+|.+++||+++++++.+.|++.+|.++++.||+||++.+++... + ...+.+++|+|+||++++|+|+|
T Consensus 900 lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~ 977 (1146)
T PRK08633 900 LRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPE 977 (1146)
T ss_pred eeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCC
Confidence 99999999999999999999999999999999999886554221 1 11356899999999999999953
No 58
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-42 Score=336.30 Aligned_cols=335 Identities=18% Similarity=0.246 Sum_probs=263.8
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
||+.+.+..+++++|+++|+.++++++||+||.+++.++|..|.+ .|+++||+|+++++|+++
T Consensus 7 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~g~~v~i~~~~~~~ 69 (528)
T PRK07470 7 MNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAA-----------------RGVRKGDRILVHSRNCNQ 69 (528)
T ss_pred CCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCCHH
Confidence 688899999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC--cccccCCCCCCCCCcccccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVSSETTVFDQ 158 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 158 (372)
++++++||+++|++++|+++..+.+++.+++++++++.++++++..+.+......... ....+...............
T Consensus 70 ~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (528)
T PRK07470 70 MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALVAR 149 (528)
T ss_pred HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHHhc
Confidence 9999999999999999999999999999999999999999998776655544322211 11111110000000000000
Q ss_pred c--ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc--ccCCCCeEEEecCchhHHHHHHHHHHHH
Q 017382 159 S--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALLAPL 234 (372)
Q Consensus 159 ~--~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~~~~~~~~~~~~~l 234 (372)
. .........++++++|+|||||||.||+|.++|.++...+......+ +....|+++..+|++|..++. .++ .+
T Consensus 150 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~-~~ 227 (528)
T PRK07470 150 HLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QLC-QV 227 (528)
T ss_pred CCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-HHH-HH
Confidence 0 00112234568999999999999999999999999976555433322 467889999999999999985 344 57
Q ss_pred HcCceEEEcC--CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecC
Q 017382 235 YAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (372)
Q Consensus 235 ~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG 312 (372)
..|++.++.+ .++++.+++. ++++++|++.++|+++..+.+... ....+++++|.+++||
T Consensus 228 ~~g~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~lr~~~~gG 289 (528)
T PRK07470 228 ARGAATVLLPSERFDPAEVWAL----------VERHRVTNLFTVPTILKMLVEHPA--------VDRYDHSSLRYVIYAG 289 (528)
T ss_pred hcCceEEEecccCcCHHHHHHH----------HHhcCCeEEechHHHHHHHHhCcC--------cCCCCCcceEEEEEcC
Confidence 7777777665 4788888888 888999999999999999877522 2234678999999999
Q ss_pred CCCCHHHHHHHHHHhCCccccccccccccccccCCCC--------CCCCCCcccccCCCceEEEeecC
Q 017382 313 SALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR--------GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~--------~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+++++.+.+.+.+.+|.++++.||+||+++.++.... .....+++|+|++|++++|+|++
T Consensus 290 ~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~ 357 (528)
T PRK07470 290 APMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDE 357 (528)
T ss_pred CCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCC
Confidence 9999999999988899999999999998865542211 12345789999999999999864
No 59
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=4.7e-42 Score=336.66 Aligned_cols=332 Identities=19% Similarity=0.231 Sum_probs=261.7
Q ss_pred CHHHHHHHHhCCcCCCceEEEeC--CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC
Q 017382 1 MEVFKAAYKKGSMARDSVAIRAD--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS 78 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~ 78 (372)
+|+.+.+.++++.+|+++|+++. ++.+||+||.+++.++|..|.+ .|+++||+|+++++|+
T Consensus 28 ~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~-----------------~g~~~g~~V~i~~~~~ 90 (546)
T PLN02330 28 LTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRS-----------------LGLRKGQVVVVVLPNV 90 (546)
T ss_pred CcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCc
Confidence 47889999999999999999873 6799999999999999999999 4999999999999999
Q ss_pred HhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCC--CCCCCc---
Q 017382 79 FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVP--NVSSET--- 153 (372)
Q Consensus 79 ~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--- 153 (372)
++++++++||+++|++++|+++..+.+++.+++++++++++++++...+.+.... ...+.+.... ......
T Consensus 91 ~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~ 166 (546)
T PLN02330 91 AEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLG----LPVIVLGEEKIEGAVNWKELL 166 (546)
T ss_pred hHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcC----CcEEEecCCCCCCcccHHHHH
Confidence 9999999999999999999999999999999999999999999988776654421 1121111110 000000
Q ss_pred cccccc-ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc--cCCCCeEEEecCchhHHHHHHHH
Q 017382 154 TVFDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNAL 230 (372)
Q Consensus 154 ~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~~~~~~~~~~ 230 (372)
...+.. .........++++++|+|||||||.||+|.++|+++..++........ ....++.+.++|++|..++...+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 246 (546)
T PLN02330 167 EAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGIC 246 (546)
T ss_pred hhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHH
Confidence 000000 001122345688999999999999999999999999876654322221 22346889999999999987677
Q ss_pred HHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhcc--CceEE
Q 017382 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK--QLRLM 308 (372)
Q Consensus 231 ~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~--~lr~v 308 (372)
+.++..|+++++.+.+++..+++. ++++++|.+.++|+++..+.+... ....++. ++|.+
T Consensus 247 ~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~--------~~~~~~~~~~l~~i 308 (546)
T PLN02330 247 CATLRNKGKVVVMSRFELRTFLNA----------LITQEVSFAPIVPPIILNLVKNPI--------VEEFDLSKLKLQAI 308 (546)
T ss_pred HHHhhcCCEEEEecccCHHHHHHH----------HHHcCCeeeecCCHHHHHHHhCcc--------ccccccchheeeeE
Confidence 888999999999999999999998 788999999999999999887421 1122233 57999
Q ss_pred EecCCCCCHHHHHHHHHHh-CCccccccccccccccccCCC--C---CCCCCCcccccCCCceEEEeec
Q 017382 309 MCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPL--R---GARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~--~---~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
++||+++++++++.|.+.| |.++++.||+||++.+..... . ...+.+++|+|+||++++|+|.
T Consensus 309 ~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~ 377 (546)
T PLN02330 309 MTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDP 377 (546)
T ss_pred EEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeC
Confidence 9999999999999999998 899999999999875543221 1 1234578999999999999984
No 60
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.5e-42 Score=371.42 Aligned_cols=325 Identities=20% Similarity=0.308 Sum_probs=268.0
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.|.++++.+|+++|++++++.+||+||.++++++|+.|.+. |+++||+|+++++|++++
T Consensus 459 ~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~-----------------g~~~g~~V~l~~~~~~~~ 521 (1296)
T PRK10252 459 TLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRER-----------------GVKPGDSVAVALPRSVFL 521 (1296)
T ss_pred CHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 578899999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (372)
+++++||+++|++++|+++..+.+++.++++.+++++++++......+.... ......... . ......
T Consensus 522 i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~---~------~~~~~~ 589 (1296)
T PRK10252 522 TLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVP---DLTSLCYNA---P------LAPQGA 589 (1296)
T ss_pred HHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCC---Cceeeeccc---c------cccccC
Confidence 9999999999999999999999999999999999999999986554432210 000000000 0 000001
Q ss_pred ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 162 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
.......++++++|+|||||||.||||+++|+++.+.+......++++++|++++..|++|..+++ .++.+|+.|++++
T Consensus 590 ~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~l~~G~~l~ 668 (1296)
T PRK10252 590 APLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVW-EFFWPFIAGAKLV 668 (1296)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHH-HHHHHHhCCCEEE
Confidence 111223578999999999999999999999999999999999999999999999999999999986 6888999999999
Q ss_pred EcCC---CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHH
Q 017382 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (372)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~ 318 (372)
+.+. .++..+++. ++++++|++.++|+++..+++.... ......++++|.+++||++++++
T Consensus 669 ~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~Ps~l~~l~~~~~~------~~~~~~~~~lr~i~~gGe~l~~~ 732 (1296)
T PRK10252 669 MAEPEAHRDPLAMQQF----------FAEYGVTTTHFVPSMLAAFVASLTP------EGARQSCASLRQVFCSGEALPAD 732 (1296)
T ss_pred ECChhccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhhhcc------ccccccCCCccEEEEecCCCCHH
Confidence 9873 578888887 7889999999999999988765321 11112468899999999999999
Q ss_pred HHHHHHHHhCCccccccccccccccccCCCC-C------CCCCCcccccCCCceEEEeecC
Q 017382 319 VMQQWETITGHRLLERYGMTEFVMAISNPLR-G------ARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 319 ~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~------~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+.+.|.+.+|.+++|.||+||++..++.... . .....++|+|++|++++|+|.+
T Consensus 733 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~ 793 (1296)
T PRK10252 733 LCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDAR 793 (1296)
T ss_pred HHHHHHhcCCCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCC
Confidence 9999998889999999999999865542211 1 2345689999999999999853
No 61
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.4e-42 Score=335.98 Aligned_cols=335 Identities=23% Similarity=0.315 Sum_probs=269.4
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
||+-+.+.++++.+|+++|+.++++.+||.||.++++++|..|.+. |+++||+|+++++|+++
T Consensus 17 ~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~-----------------g~~~g~~V~i~~~~~~~ 79 (542)
T PRK07786 17 QNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRR-----------------GVGFGDRVLILMLNRTE 79 (542)
T ss_pred cCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHH
Confidence 5788999999999999999999999999999999999999999984 99999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC-c-ccccCCCC--CCCCCcccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-K-FSLIPPVP--NVSSETTVF 156 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~-~~~~~~~~--~~~~~~~~~ 156 (372)
++++++||+++|++++|+++..+.+++.+++++++++++++++.....+......... + .+...... .........
T Consensus 80 ~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (542)
T PRK07786 80 FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYEDLL 159 (542)
T ss_pred HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHHHh
Confidence 9999999999999999999999999999999999999999998766655444322111 1 11111100 000000000
Q ss_pred -cccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhccc-CCCCeEEEecCchhHHHHHHHHHHHH
Q 017382 157 -DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEY-TSADQFLHCLPLHHVHGLFNALLAPL 234 (372)
Q Consensus 157 -~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~-~~~d~~l~~~pl~~~~~~~~~~~~~l 234 (372)
.............+++++++|||||||.||+|.++|+++...+......+++ ...+++++..|++|.+|+. .++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~~~~~l 238 (542)
T PRK07786 160 AEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIG-SMLPGL 238 (542)
T ss_pred hccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHH-HHHHHH
Confidence 0001111223445789999999999999999999999999888877777766 5788999999999999985 688899
Q ss_pred HcCceEEEcC--CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecC
Q 017382 235 YAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGS 312 (372)
Q Consensus 235 ~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG 312 (372)
..|+++++.+ .+++..+++. ++++++|.++++|+++..+++..... ....++|.+++||
T Consensus 239 ~~G~~~v~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~l~~l~~~~~~~---------~~~~~lr~i~~gg 299 (542)
T PRK07786 239 LLGAPTVIYPLGAFDPGQLLDV----------LEAEKVTGIFLVPAQWQAVCAEQQAR---------PRDLALRVLSWGA 299 (542)
T ss_pred HccCEEEEccCCCcCHHHHHHH----------HHHcCCeEEEehHHHHHHHHhCcccC---------ccCcceEEEEECC
Confidence 9999999865 5789999988 78899999999999999998753211 1123699999999
Q ss_pred CCCCHHHHHHHHHHh-CCccccccccccccccccCCCC--CCCCCCcccccCCCceEEEeecC
Q 017382 313 SALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPLR--GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 313 ~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~--~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+++++++++.+.+.| +.++++.||+||++.+.+.... .....+++|+|+++++++|+|.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 362 (542)
T PRK07786 300 APASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDEN 362 (542)
T ss_pred CCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCC
Confidence 999999999999988 7899999999999866543222 22456889999999999999864
No 62
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.5e-41 Score=330.43 Aligned_cols=332 Identities=25% Similarity=0.351 Sum_probs=265.3
Q ss_pred HHHHHh-CCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHH
Q 017382 5 KAAYKK-GSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVA 83 (372)
Q Consensus 5 ~~l~~~-a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~ 83 (372)
+.+.++ ++.+||++|++.+++.+||.||.++++++|+.|.+ .|+++|++|+++++|++++++
T Consensus 8 ~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~-----------------~g~~~g~~v~l~~~~~~~~~~ 70 (508)
T TIGR02262 8 DLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRR-----------------LGVKREERVLLLMLDGVDFPI 70 (508)
T ss_pred HHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHHHH
Confidence 445555 57799999999999999999999999999999998 599999999999999999999
Q ss_pred HHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCc--ccccCCCCC-CCCCccccc-cc
Q 017382 84 GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPN-VSSETTVFD-QS 159 (372)
Q Consensus 84 ~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~-~~ 159 (372)
+++||+++|++++|+++.++.+++.++++.++++++++++...+.+.+........ ......... ......... ..
T Consensus 71 ~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (508)
T TIGR02262 71 AFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLATES 150 (508)
T ss_pred HHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhhcCC
Confidence 99999999999999999999999999999999999999988777666554333211 111111000 000000000 00
Q ss_pred ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHH-HHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCc
Q 017382 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQM-LTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (372)
Q Consensus 160 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~-~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~ 238 (372)
.........++++++++|||||||.||+|.++|+++...+.. ....++++.+|+++...|++|..++...++.++..|+
T Consensus 151 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~ 230 (508)
T TIGR02262 151 EQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGA 230 (508)
T ss_pred CccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCc
Confidence 111122345789999999999999999999999999887765 3456688899999999999999998767788899999
Q ss_pred eEEEcCC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCH
Q 017382 239 TVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (372)
Q Consensus 239 ~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~ 317 (372)
++++.+. +++..+++. ++++++|.+.++|+++..+.+... .....+.++|.+++||+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~~~~~~~--------~~~~~~~~l~~~~~~G~~l~~ 292 (508)
T TIGR02262 231 TTVLMGERPTPDAVFDR----------LRRHQPTIFYGVPTLYAAMLADPN--------LPAEDQVRLRLCTSAGEALPA 292 (508)
T ss_pred eEEEeCCCCCHHHHHHH----------HHHHCCcEEecchHHHHHHhcCcc--------ccccccccceeEEEcCCCCCH
Confidence 9988764 578888888 778999999999999887765421 122346789999999999999
Q ss_pred HHHHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 318 PVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 318 ~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
++.+.|.+.||+++++.||+||++.+.+.........+++|+|++|++++|+|.
T Consensus 293 ~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~ 346 (508)
T TIGR02262 293 EVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGDVRYGTSGKPVPGYRLRLVGD 346 (508)
T ss_pred HHHHHHHHHhCCchhhCccccccCceeecCCccCCCCCCcCCCCCCcEEEEECC
Confidence 999999999999999999999998765533333345678999999999999985
No 63
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3.6e-42 Score=335.79 Aligned_cols=324 Identities=21% Similarity=0.290 Sum_probs=247.0
Q ss_pred CH-HHHHHHHhCCcCCCceEEEeCC----ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEc
Q 017382 1 ME-VFKAAYKKGSMARDSVAIRADQ----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (372)
Q Consensus 1 m~-~~~~l~~~a~~~~~~~al~~~~----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~ 75 (372)
|| +.+.|.++++++|+++|+++.+ +++||+||.++++++|+.|.+ . ++||+|++++
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~-----------------~--~~g~~V~l~~ 61 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLD-----------------R--DRPGAVGLVG 61 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHh-----------------c--CCCCeEEEEc
Confidence 78 8899999999999999999876 889999999999999999987 3 7899999999
Q ss_pred CCCHhHHHHHHHHHhhCceeeeCCCC-------CCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCC
Q 017382 76 KPSFEFVAGVLGTWFSGCIAVPLALS-------YPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN 148 (372)
Q Consensus 76 ~n~~~~~~~~~A~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (372)
+|+++++++++|++++|+++++++.. ...+++.++++.++++++|++....+.+...... +.+.....
T Consensus 62 ~~~~e~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~ 136 (525)
T PRK05851 62 EPTVELVAAIQGAWLAGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-----VTVHDLAT 136 (525)
T ss_pred CCCHHHHHHHHHHHHcCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-----cccccccc
Confidence 99999999999999999986544311 1234556778999999999987765544332111 01100000
Q ss_pred CCCCcccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccC-CCCeEEEecCchhHHHHH
Q 017382 149 VSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT-SADQFLHCLPLHHVHGLF 227 (372)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~-~~d~~l~~~pl~~~~~~~ 227 (372)
.. ............++++++|+|||||||.||||+++|+++...+......+++. .+|++++++|++|.+++.
T Consensus 137 ~~------~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 210 (525)
T PRK05851 137 AA------HTNRSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLA 210 (525)
T ss_pred cc------cccccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHH
Confidence 00 00000011123578999999999999999999999999999988888888888 899999999999999996
Q ss_pred HHHHHHHHcCceEEEcCC--C--chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhcc
Q 017382 228 NALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK 303 (372)
Q Consensus 228 ~~~~~~l~~G~~~~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~ 303 (372)
.++.++..|+++++.+. + ++..+++. ++++++|++..+|.++..+.+... .....+++
T Consensus 211 -~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~p~~~~~~l~~~~~-------~~~~~~l~ 272 (525)
T PRK05851 211 -FLLTAALAGAPLWLAPTTAFSASPFRWLSW----------LSDSRATLTAAPNFAYNLIGKYAR-------RVSDVDLG 272 (525)
T ss_pred -HHHHHHHcCCeEEEcCHHHHHHCHHHHHHH----------HHHhCCeEEeCCcHHHHHHHHhhc-------cccCCCHH
Confidence 57889999999999873 4 46677777 778899988665555544433211 11234678
Q ss_pred CceEEEecCCCCCHHHHHHHHHH---hCC---ccccccccccccccccCCCC---------------CCCCCCcccccCC
Q 017382 304 QLRLMMCGSSALPLPVMQQWETI---TGH---RLLERYGMTEFVMAISNPLR---------------GARKAGTVGNPLP 362 (372)
Q Consensus 304 ~lr~v~~gG~~~~~~~~~~~~~~---~~~---~l~~~YG~tE~~~~~~~~~~---------------~~~~~~svG~p~~ 362 (372)
++|.+++||+++++++.+.|.+. +|. .++|.||+||++..++.... ...+.+++|+|+|
T Consensus 273 ~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~ 352 (525)
T PRK05851 273 ALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIP 352 (525)
T ss_pred HhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCC
Confidence 99999999999999999999875 454 49999999999765442211 0123468999999
Q ss_pred CceEEEeecC
Q 017382 363 GVQVSMILLL 372 (372)
Q Consensus 363 g~~i~Ivd~d 372 (372)
|++++|+|.|
T Consensus 353 g~~v~i~d~~ 362 (525)
T PRK05851 353 GMEVRISPGD 362 (525)
T ss_pred CcEEEEECCC
Confidence 9999999864
No 64
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.1e-42 Score=341.63 Aligned_cols=334 Identities=18% Similarity=0.167 Sum_probs=255.1
Q ss_pred HHHHHHHHhCCcCCCceEEEeCC-----ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcC
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~ 76 (372)
|+.+.+.++ .+|+++|+++.+ +++||+||.+++.++|+.|++ .|+++||+|+++++
T Consensus 87 n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~gd~V~i~~~ 147 (655)
T PRK03584 87 NYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRA-----------------LGVGPGDRVAAYLP 147 (655)
T ss_pred eHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 444555543 479999999743 689999999999999999999 49999999999999
Q ss_pred CCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch---------HHHHHHHHhhcCC--cccccCC
Q 017382 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSGA--KFSLIPP 145 (372)
Q Consensus 77 n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~--~~~~~~~ 145 (372)
|+++++++++||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.++...... .++.+..
T Consensus 148 n~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 227 (655)
T PRK03584 148 NIPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPY 227 (655)
T ss_pred CCHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEec
Confidence 9999999999999999999999999999999999999999999998643 2233333322221 1122211
Q ss_pred CCC------CCCCccccc-----ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHH-HHHHHhhcccCCCCe
Q 017382 146 VPN------VSSETTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQ-VQMLTEAWEYTSADQ 213 (372)
Q Consensus 146 ~~~------~~~~~~~~~-----~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~-~~~~~~~~~~~~~d~ 213 (372)
... ........+ ............+++++|+|||||||.||||+++|.+++.+ .......+++.++|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~ 307 (655)
T PRK03584 228 LGPAAAAAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDR 307 (655)
T ss_pred CCCcccccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCE
Confidence 100 000000000 00011122345689999999999999999999999987644 455566778899999
Q ss_pred EEEecCchhHHHHHHHHHHHHHcCceEEEcCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhh
Q 017382 214 FLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (372)
Q Consensus 214 ~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~ 289 (372)
+++..++.|..+. .++.+|+.|+++++.+. +++..+++. ++++++|++..+|+++..+.+....
T Consensus 308 ~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~P~~~~~l~~~~~~ 375 (655)
T PRK03584 308 FFWYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDL----------AAEEGVTVFGTSAKYLDACEKAGLV 375 (655)
T ss_pred EEEcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHH----------HHHHCCEEEEcCHHHHHHHHhcCCC
Confidence 9999999998654 36688999999999763 478888888 7889999999999999988763110
Q ss_pred ccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHh--CCcccccccccccccccc-CCCCCCCCCCcccccCCCceE
Q 017382 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQV 366 (372)
Q Consensus 290 ~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~--~~~l~~~YG~tE~~~~~~-~~~~~~~~~~svG~p~~g~~i 366 (372)
.....++++||.+++||+++++++.+.|.+.+ +..+.+.||+||+++... .......+.+++|.|++|+++
T Consensus 376 ------~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~ 449 (655)
T PRK03584 376 ------PGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAV 449 (655)
T ss_pred ------ccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCcee
Confidence 11235789999999999999999999999988 478999999999864433 222223467899999999999
Q ss_pred EEeecC
Q 017382 367 SMILLL 372 (372)
Q Consensus 367 ~Ivd~d 372 (372)
+|+|+|
T Consensus 450 ~ivd~~ 455 (655)
T PRK03584 450 EAWDED 455 (655)
T ss_pred EEECCC
Confidence 999975
No 65
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=2e-41 Score=330.22 Aligned_cols=335 Identities=22% Similarity=0.284 Sum_probs=264.1
Q ss_pred HHHHHHHHhCCcCCCceEEEeCC-----ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcC
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~ 76 (372)
|+.+.+.+.++++|+++|+++++ +++||.||.++++++|+.|.+ +|+++||+|+++++
T Consensus 8 ~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~-----------------~g~~~~~~v~i~~~ 70 (517)
T PRK08008 8 HLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYS-----------------LGIRKGDKVALHLD 70 (517)
T ss_pred cHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 57889999999999999998753 789999999999999999998 49999999999999
Q ss_pred CCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC--Cc-ccccCC-CCCCCCC
Q 017382 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AK-FSLIPP-VPNVSSE 152 (372)
Q Consensus 77 n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~-~~~~~~-~~~~~~~ 152 (372)
|+++++++++||+++|++++++++..+.+++.+++++++++.++++++..+.+.++..... .+ ...... .......
T Consensus 71 n~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (517)
T PRK08008 71 NCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGV 150 (517)
T ss_pred CCHHHHHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcccccc
Confidence 9999999999999999999999999999999999999999999999887776665543221 11 111111 0000000
Q ss_pred ccccc---cc--ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHH
Q 017382 153 TTVFD---QS--QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227 (372)
Q Consensus 153 ~~~~~---~~--~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~ 227 (372)
..... .. .........++++++|+|||||||.||+|+++|+++............+..++++++.+|++|..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 230 (517)
T PRK08008 151 SSFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQC 230 (517)
T ss_pred cCHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHH
Confidence 00000 00 00112234568999999999999999999999999986554443444578899999999999998777
Q ss_pred HHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceE
Q 017382 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (372)
Q Consensus 228 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~ 307 (372)
..++.++..|+++++.+.+++..+++. ++++++|++.++|++++.+...... ......+++.
T Consensus 231 ~~~~~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~l~~ 292 (517)
T PRK08008 231 TAAMAAFSAGATFVLLEKYSARAFWGQ----------VCKYRATITECIPMMIRTLMVQPPS--------ANDRQHCLRE 292 (517)
T ss_pred HHHHHHHhcCcEEEEccccCHHHHHHH----------HHHcCCcEEechHHHHHHHHhCCCc--------ccccccccee
Confidence 778889999999999999999999998 7889999999999999888764221 1112356777
Q ss_pred EEecCCCCCHHHHHHHHHHhCCccccccccccccccccC-CCCCCCCCCcccccCCCceEEEeecC
Q 017382 308 MMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISN-PLRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 308 v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~-~~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+.++ .+++++..+.|.+.+|.++++.||+||++..++. ........+++|+|++|++++|+|.+
T Consensus 293 ~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~ 357 (517)
T PRK08008 293 VMFY-LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDH 357 (517)
T ss_pred eEEe-cCCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCccccCCCCcEEEEECCC
Confidence 7775 4789999999999999999999999999865442 22233456789999999999999863
No 66
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.7e-42 Score=394.51 Aligned_cols=323 Identities=21% Similarity=0.313 Sum_probs=270.5
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++++.|.++++++||++|++++++++||+||.++++++|+.|.+. |+++|++|+++++|++++
T Consensus 3096 ~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~-----------------gv~~g~~V~l~~~~s~~~ 3158 (3956)
T PRK12467 3096 LVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAI-----------------GVGPDVLVGVAVERSVEM 3158 (3956)
T ss_pred cHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHc-----------------CCCCCCeEEEEeCCCHHH
Confidence 678999999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (372)
+++++||+++|++++|++|.++.+++.++++++++++++++....+.+... .......++... .......
T Consensus 3159 vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~ 3228 (3956)
T PRK12467 3159 IVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP---AGDTALTLDRLD-------LNGYSEN 3228 (3956)
T ss_pred HHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc---cCCceeeecchh-------hcccCCC
Confidence 999999999999999999999999999999999999999997654433211 011111111100 0001111
Q ss_pred ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 162 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
.......++++++|+|||||||+||||+++|+++.+.+......++++++|+++++.|++|..+.+ .++.+|+.|++++
T Consensus 3229 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~l~ 3307 (3956)
T PRK12467 3229 NPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQE-RFLWTLICGGCLV 3307 (3956)
T ss_pred CCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHH-HHHHHHhCCCEEE
Confidence 122345678999999999999999999999999999999999999999999999999999999885 6899999999999
Q ss_pred EcCC--CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHH
Q 017382 242 FMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (372)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~ 319 (372)
+.+. +++..+++. ++++++|++.++|+++..+++.. ...++++||.+++|||++++++
T Consensus 3308 i~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~l~~l~~~~----------~~~~~~~lr~~~~gGe~~~~~~ 3367 (3956)
T PRK12467 3308 VRDNDLWDPEELWQA----------IHAHRISIACFPPAYLQQFAEDA----------GGADCASLDIYVFGGEAVPPAA 3367 (3956)
T ss_pred ECCcccCCHHHHHHH----------HHHcCCEEEEcCHHHHHHHHhcc----------cccCCCCceEEEEecCCCCHHH
Confidence 9986 688899988 88899999999999999887641 1236788999999999999999
Q ss_pred HHHHHHHh-CCccccccccccccccccCCC-CC----CCCCCcccccCCCceEEEeecC
Q 017382 320 MQQWETIT-GHRLLERYGMTEFVMAISNPL-RG----ARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 320 ~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~-~~----~~~~~svG~p~~g~~i~Ivd~d 372 (372)
.+.|.+.+ +..++|.||+||+++.++... .. .....++|+|++|++++|+|.+
T Consensus 3368 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~ 3426 (3956)
T PRK12467 3368 FEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQ 3426 (3956)
T ss_pred HHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCC
Confidence 99999887 678999999999987654211 11 1234789999999999999864
No 67
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-41 Score=326.46 Aligned_cols=300 Identities=33% Similarity=0.518 Sum_probs=252.7
Q ss_pred CcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhh
Q 017382 12 SMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFS 91 (372)
Q Consensus 12 ~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~ 91 (372)
...++++|++++++++||+||.++++++|..|+. +|+|+++++|+++++++++||+++
T Consensus 11 ~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~----------------------~~~V~l~~~~~~~~~~~~la~~~~ 68 (471)
T PRK07787 11 AAADIADAVRIGGRVLSRSDLAGAATAVAERVAG----------------------ARRVAVLATPTLATVLAVVGALIA 68 (471)
T ss_pred cccCCceEEEeCCcEEEHHHHHHHHHHHHHHhcc----------------------CCEEEEECCCCHHHHHHHHHHHhc
Confidence 4468999999999999999999999999999964 599999999999999999999999
Q ss_pred CceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccccccccCCCCCC
Q 017382 92 GCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGED 171 (372)
Q Consensus 92 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (372)
|++++|+++..+.+++.+++++++++.++++++... .......... ... . ........+++
T Consensus 69 G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~~~~~------~~~~~~~~~~----~~~---~------~~~~~~~~~~~ 129 (471)
T PRK07787 69 GVPVVPVPPDSGVAERRHILADSGAQAWLGPAPDDP------AGLPHVPVRL----HAR---S------WHRYPEPDPDA 129 (471)
T ss_pred CcEEeecCCCCChHHHHHHHHhcCCCEEEecCCccc------ccccceeeec----ccc---c------cccCCCCCCCc
Confidence 999999999999999999999999999999863110 0000000000 000 0 00112245689
Q ss_pred cEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHH
Q 017382 172 PALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGI 251 (372)
Q Consensus 172 ~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 251 (372)
+++|+|||||||.||+|.++|+++...+......+.+..+|++++.+|++|..|++..++.++..|+++++.+.+++..+
T Consensus 130 ~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~ 209 (471)
T PRK07787 130 PALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAY 209 (471)
T ss_pred eEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHH
Confidence 99999999999999999999999999988888888899999999999999999998889999999999999999999999
Q ss_pred HHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCcc
Q 017382 252 WQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRL 331 (372)
Q Consensus 252 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l 331 (372)
++. ++ +++|++.++|+++..+.+... ....++++|.+++||+++++++++.|.+.++.++
T Consensus 210 ~~~----------i~-~~~t~~~~~P~~~~~l~~~~~---------~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~ 269 (471)
T PRK07787 210 AQA----------LS-EGGTLYFGVPTVWSRIAADPE---------AARALRGARLLVSGSAALPVPVFDRLAALTGHRP 269 (471)
T ss_pred HHH----------Hh-hCceEEEcchHHHHHHHhCcc---------ccccccceeEEEECCCCCCHHHHHHHHHHcCCCe
Confidence 998 78 899999999999999886421 1235688999999999999999999999899999
Q ss_pred ccccccccccccccCCCCCCCCCCcccccCCCceEEEeecC
Q 017382 332 LERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 332 ~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
++.||+||++...+.........+++|+|++|++++|+|++
T Consensus 270 ~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~g~~~~i~d~~ 310 (471)
T PRK07787 270 VERYGMTETLITLSTRADGERRPGWVGLPLAGVETRLVDED 310 (471)
T ss_pred ecccCccccCcceecCCCCcccCCcccccCCCcEEEEECCC
Confidence 99999999986554444334566889999999999999864
No 68
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.7e-41 Score=331.38 Aligned_cols=336 Identities=25% Similarity=0.295 Sum_probs=266.1
Q ss_pred HHHHHHHHhCCcCCCceEEEe--CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
++.+.|.++++++|+++|++. .++.+||+||.++++++|+.|.+ .|+++||+|+++++|++
T Consensus 19 ~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~-----------------~gi~~g~~V~i~~~~~~ 81 (558)
T PRK12583 19 TIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLA-----------------LGVQPGDRVGIWAPNCA 81 (558)
T ss_pred cHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCh
Confidence 688999999999999999987 45799999999999999999998 49999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH-----HHHHHHHhhcCC---------------c
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSGA---------------K 139 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~---------------~ 139 (372)
++++++||++++|++++|+++..+.+++.+++++++++++|+++... ..+......... .
T Consensus 82 ~~~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
T PRK12583 82 EWLLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRG 161 (558)
T ss_pred HHHHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceE
Confidence 99999999999999999999999999999999999999999976431 222221111000 0
Q ss_pred ccccCCCC--CCCCCccc---ccc----cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCC
Q 017382 140 FSLIPPVP--NVSSETTV---FDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTS 210 (372)
Q Consensus 140 ~~~~~~~~--~~~~~~~~---~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~ 210 (372)
.+...... ........ ... ..........++++++++|||||||.||+|.++|+++..++......++++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 241 (558)
T PRK12583 162 VVSLAPAPPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTE 241 (558)
T ss_pred EEEecCCCCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCC
Confidence 00000000 00000000 000 0000112235688999999999999999999999999998888888888999
Q ss_pred CCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhh
Q 017382 211 ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEA 289 (372)
Q Consensus 211 ~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~ 289 (372)
+|++++..|++|..|....++.++..|+++++.. .+++..+++. ++++++|+++++|+++..+.+...
T Consensus 242 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~----------i~~~~~t~l~~~P~~~~~l~~~~~- 310 (558)
T PRK12583 242 HDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQA----------VEEERCTALYGVPTMFIAELDHPQ- 310 (558)
T ss_pred CCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHH----------HHHcCCeEEeccHHHHHHHHcccc-
Confidence 9999999999999999888899999999999754 5788888888 788999999999999988776421
Q ss_pred ccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhC-CccccccccccccccccCCCC---CCCCCCcccccCCCce
Q 017382 290 MDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAISNPLR---GARKAGTVGNPLPGVQ 365 (372)
Q Consensus 290 ~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~~---~~~~~~svG~p~~g~~ 365 (372)
....+++++|.+++||+++++++.+.+.+.++ ..+++.||+||++.+.+.... ...+..++|+|+++++
T Consensus 311 -------~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~ 383 (558)
T PRK12583 311 -------RGNFDLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLE 383 (558)
T ss_pred -------ccCCCchhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCe
Confidence 12346789999999999999999999999886 479999999999876653321 1235688999999999
Q ss_pred EEEeecC
Q 017382 366 VSMILLL 372 (372)
Q Consensus 366 i~Ivd~d 372 (372)
++|+|+|
T Consensus 384 ~~i~d~~ 390 (558)
T PRK12583 384 VKVVDPD 390 (558)
T ss_pred EEEECCC
Confidence 9999874
No 69
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.9e-41 Score=336.36 Aligned_cols=333 Identities=19% Similarity=0.256 Sum_probs=250.0
Q ss_pred CHHHHHHHHhCCcCCCceEEEeC---------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEE
Q 017382 1 MEVFKAAYKKGSMARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V 71 (372)
||+.+.+.++++++|+++|+++. .+.+||+||.++++++|+.|.+ .+++||+|
T Consensus 34 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~------------------~~~~gd~V 95 (612)
T PRK12476 34 TTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQ------------------VAGPGDRV 95 (612)
T ss_pred CcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHH------------------hcCCCCEE
Confidence 47788899999999999999862 1489999999999999999988 48999999
Q ss_pred EEEcCCCHhHHHHHHHHHhhCceeeeC-CCCCC--HHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC----CcccccC
Q 017382 72 GIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYP--ESELLHVMHDSDISMVLSTEDYREVLQNVASKSG----AKFSLIP 144 (372)
Q Consensus 72 ~l~~~n~~~~~~~~~A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~ 144 (372)
+++++|+++++++++||+++|++++|+ ++.++ .+++.+++++++++++|+++...+.+........ ..++.+.
T Consensus 96 ~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 175 (612)
T PRK12476 96 AILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAID 175 (612)
T ss_pred EEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEec
Confidence 999999999999999999999999999 57766 7899999999999999999877665544332221 1111111
Q ss_pred CCCCCCCCcccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc-cCCCCeEEEecCchhH
Q 017382 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE-YTSADQFLHCLPLHHV 223 (372)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~-~~~~d~~l~~~pl~~~ 223 (372)
.... . ...........++++++|+|||||||.||||+++|+++..++......+. +.+++++++++|++|.
T Consensus 176 ~~~~-----~---~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~ 247 (612)
T PRK12476 176 AIPD-----S---AGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHD 247 (612)
T ss_pred cccc-----c---ccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccc
Confidence 1100 0 00001112345689999999999999999999999999887777666677 7888999999999999
Q ss_pred HHHHHHHHHHHHcCceEEEcC-CC--chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhh
Q 017382 224 HGLFNALLAPLYAGATVEFMP-KF--SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASAS 300 (372)
Q Consensus 224 ~~~~~~~~~~l~~G~~~~~~~-~~--~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~ 300 (372)
.++...++.++..|.++++.+ .+ ++..+++.+. ..+++++.++.+|+++..+....... ......
T Consensus 248 ~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~--------~~~~~~t~~~~~P~~~~~l~~~~~~~----~~~~~~ 315 (612)
T PRK12476 248 MGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALS--------EGSRTGRVVTAAPNFAYEWAAQRGLP----AEGDDI 315 (612)
T ss_pred cchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHh--------hhccCCeEEEeCCcHHHHHHHHhcCh----hhhcCc
Confidence 998654444454444444433 23 7788888731 14588999999999988876531100 011234
Q ss_pred hccCceEEEecCCCCCHHHHHHHHHHh---CC---ccccccccccccccccCCCCCC-----------------------
Q 017382 301 AAKQLRLMMCGSSALPLPVMQQWETIT---GH---RLLERYGMTEFVMAISNPLRGA----------------------- 351 (372)
Q Consensus 301 ~l~~lr~v~~gG~~~~~~~~~~~~~~~---~~---~l~~~YG~tE~~~~~~~~~~~~----------------------- 351 (372)
+++++| +++||+++++++.+.|.+.| |. .+++.||+||++..++......
T Consensus 316 ~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 394 (612)
T PRK12476 316 DLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAAD 394 (612)
T ss_pred chhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCC
Confidence 678999 99999999999999999988 44 4899999999875543211100
Q ss_pred ----CCCCcccccCCCceEEEeecC
Q 017382 352 ----RKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 352 ----~~~~svG~p~~g~~i~Ivd~d 372 (372)
.+.+++|+|++|++++|+|.+
T Consensus 395 ~~~~~~~~~~G~~~~g~~v~ivd~~ 419 (612)
T PRK12476 395 APNAVAHVSCGQVARSQWAVIVDPD 419 (612)
T ss_pred CCCcceeEeCCCcCCCCEEEEEeCC
Confidence 123589999999999999964
No 70
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-41 Score=330.66 Aligned_cols=335 Identities=18% Similarity=0.246 Sum_probs=261.7
Q ss_pred HHHHHHHHhCCcCCCceEEEe--C--CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCC
Q 017382 2 EVFKAAYKKGSMARDSVAIRA--D--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~--~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n 77 (372)
++-+.|..+++.+|++.++.+ + .+.+||.||.++++++|++|.+ +|+++||+|+++++|
T Consensus 11 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~-----------------~g~~~~d~v~i~~~~ 73 (539)
T PRK07008 11 LISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAA-----------------LGVEPGDRVGTLAWN 73 (539)
T ss_pred CHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCC
Confidence 356778888888999888874 2 2689999999999999999999 499999999999999
Q ss_pred CHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcc--cccCCCCCCCC----
Q 017382 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKF--SLIPPVPNVSS---- 151 (372)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---- 151 (372)
++++++.++||+++|++++|+++.++++++.++++.+++++++++.++.+.+.++........ +.+........
T Consensus 74 ~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (539)
T PRK07008 74 GYRHLEAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTP 153 (539)
T ss_pred cHHHHHHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCcc
Confidence 999999999999999999999999999999999999999999999887776665543332111 11111100000
Q ss_pred Cccc---ccc-cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHH--HHHhhcccCCCCeEEEecCchhHHH
Q 017382 152 ETTV---FDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQ--MLTEAWEYTSADQFLHCLPLHHVHG 225 (372)
Q Consensus 152 ~~~~---~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~--~~~~~~~~~~~d~~l~~~pl~~~~~ 225 (372)
.... ... ..........++++++++|||||||.||+|++||++++.+.. .....++++.+|+++...|++|..+
T Consensus 154 ~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~ 233 (539)
T PRK07008 154 LLCYETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNA 233 (539)
T ss_pred cccHHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhh
Confidence 0000 000 001112234668899999999999999999999999875432 2334667888999999999999887
Q ss_pred HHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccC
Q 017382 226 LFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQ 304 (372)
Q Consensus 226 ~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~ 304 (372)
+. .++.++..|+++++.+ .+++..+++. ++++++|++.++|+++..+.+.... ...++++
T Consensus 234 ~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~----------l~~~~vt~~~~~P~~~~~l~~~~~~--------~~~~~~~ 294 (539)
T PRK07008 234 WG-LPYSAPLTGAKLVLPGPDLDGKSLYEL----------IEAERVTFSAGVPTVWLGLLNHMRE--------AGLRFST 294 (539)
T ss_pred HH-HHHHHHhcCceEEEecCCcCHHHHHHH----------HHHcCCEEEEechHHHHHHHhcccc--------cCCCccc
Confidence 74 3577899999999874 5788888888 7889999999999999999875322 2346789
Q ss_pred ceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCC-----------CCCCCCcccccCCCceEEEeecC
Q 017382 305 LRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-----------GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 305 lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-----------~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+|.++++|+++++++.+.|.+.+|.++++.||+||++..++.... ......++|+|+||++++|+|++
T Consensus 295 l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~ 373 (539)
T PRK07008 295 LRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDD 373 (539)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCC
Confidence 999999999999999999999999999999999999865432110 01124689999999999999864
No 71
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.9e-43 Score=304.50 Aligned_cols=336 Identities=20% Similarity=0.219 Sum_probs=281.6
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.|.++|.++||++|++++++.+||+||.++++++|..|++ +|+++||+|.+.+||..+|
T Consensus 29 ~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~-----------------lGi~~Gd~vlvQLpN~~ef 91 (542)
T COG1021 29 TLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRR-----------------LGIKPGDTVLVQLPNVAEF 91 (542)
T ss_pred cHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCchHHH
Confidence 57889999999999999999999999999999999999999999 5999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc-----hHHHHHHHHhhcCC-cccccCCCCC-CCCCcc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED-----YREVLQNVASKSGA-KFSLIPPVPN-VSSETT 154 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 154 (372)
++++||++++|+++|.-=|+....||....+...++.+|.+.. +.+...+....... +.+++..... ......
T Consensus 92 ~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~~~~ 171 (542)
T COG1021 92 YITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSVLEA 171 (542)
T ss_pred HHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcchhhh
Confidence 9999999999999999989999999999999999999998863 34555555554443 3333332111 111111
Q ss_pred ccc--ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH-HHH
Q 017382 155 VFD--QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALL 231 (372)
Q Consensus 155 ~~~--~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~-~~~ 231 (372)
... .....+.++.+++++++...+.||||.||.+..+|.....++..-.+.+++++.+++++.+|..|-+.+.. +.+
T Consensus 172 ~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~L 251 (542)
T COG1021 172 ALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGAL 251 (542)
T ss_pred hhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchh
Confidence 111 11112244567788999999999999999999999999999999999999999999999999999877643 678
Q ss_pred HHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEec
Q 017382 232 APLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCG 311 (372)
Q Consensus 232 ~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~g 311 (372)
+.+..|+++|+.+..+|+..+.. |++++||+...+|.+...++++.+ -...+++|||.+-+|
T Consensus 252 Gv~~agG~VVla~~psp~~~F~l----------Ierh~Vt~tALVPpla~LWlqa~e--------~~~~~LsSLrllQVG 313 (542)
T COG1021 252 GVFLAGGTVVLAPDPSPELCFPL----------IERHGVTVTALVPPLASLWLQAAE--------WERADLSSLRLLQVG 313 (542)
T ss_pred heeeeccEEEECCCCCHHHHHHH----------HHHhccceEEeccHHHHHHHHhhh--------cccCCchheeEEeec
Confidence 88999999999999999999999 899999999999999999998743 255689999999999
Q ss_pred CCCCCHHHHHHHHHHhCCccccccccccccccccCC-CCCCCCCCcccccC-CCceEEEeecC
Q 017382 312 SSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPL-PGVQVSMILLL 372 (372)
Q Consensus 312 G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~~~~~~svG~p~-~g~~i~Ivd~d 372 (372)
|+.++++..++....+|+.+-+.|||.|.-..-+-- ...+.-..+.|+|+ |.=|++|+|.|
T Consensus 314 Garl~~~~Arrv~~~lgC~LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~d 376 (542)
T COG1021 314 GARLSATLARRVPAVLGCQLQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDAD 376 (542)
T ss_pred CcccCHHHHhhchhhhCchHHHHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCC
Confidence 999999999999999999999999999976555422 22244568899999 66789999976
No 72
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.9e-41 Score=332.10 Aligned_cols=338 Identities=22% Similarity=0.304 Sum_probs=261.8
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+++.+.|.++++++|+++|+..+++.+||.||.++++++|+.|.++ .|+++||+|+++++|+++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~----------------~gi~~gd~V~i~~~n~~e 87 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQH----------------TDLVPGDRIAVQMPNVLQ 87 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHH
Confidence 3678899999999999999999999999999999999999999873 389999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCccccc-------CCC-------
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLI-------PPV------- 146 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-------~~~------- 146 (372)
++++++||+++|++++|+++..+.+++.+++++++++++++++...+.+.............. ...
T Consensus 88 ~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (562)
T PRK12492 88 YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNT 167 (562)
T ss_pred HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhccc
Confidence 999999999999999999999999999999999999999998765444433322110000000 000
Q ss_pred ---------CC--CCCCccccc---c--cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc---
Q 017382 147 ---------PN--VSSETTVFD---Q--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE--- 207 (372)
Q Consensus 147 ---------~~--~~~~~~~~~---~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~--- 207 (372)
.. ......... . ...........+++++|+|||||||.||+|+++|+++..++......+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~ 247 (562)
T PRK12492 168 VVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLG 247 (562)
T ss_pred ccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccc
Confidence 00 000000000 0 0000112345678999999999999999999999999887766555442
Q ss_pred ------cCC-CCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHH
Q 017382 208 ------YTS-ADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (372)
Q Consensus 208 ------~~~-~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~ 279 (372)
+.. .++++..+|++|.+++...++..+..|...++.. .+++..++.. ++++++|++.++|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~ 317 (562)
T PRK12492 248 PDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKE----------LGKWRFSALLGLNTL 317 (562)
T ss_pred ccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHH----------HHHhCCceeeCcHHH
Confidence 222 3577899999999998766777788888776654 4678888887 788999999999999
Q ss_pred HHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCC-CCCCCCCccc
Q 017382 280 YTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVG 358 (372)
Q Consensus 280 ~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~svG 358 (372)
+..+.+... ....+++++|.+++||+++++.+.+.|.+.+|+++++.||+||++.+++... ....+.+++|
T Consensus 318 ~~~l~~~~~--------~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G 389 (562)
T PRK12492 318 FVALMDHPG--------FKDLDFSALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGELARLGTVG 389 (562)
T ss_pred HHHHHhCcC--------cccccccceeEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcccccCCccc
Confidence 999887522 2234678999999999999999999999989999999999999986655332 2234567899
Q ss_pred ccCCCceEEEeecC
Q 017382 359 NPLPGVQVSMILLL 372 (372)
Q Consensus 359 ~p~~g~~i~Ivd~d 372 (372)
+|++|++++|+|++
T Consensus 390 ~p~~~~~v~ivd~~ 403 (562)
T PRK12492 390 IPVPGTALKVIDDD 403 (562)
T ss_pred eecCCCEEEEECCC
Confidence 99999999999964
No 73
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-41 Score=335.29 Aligned_cols=322 Identities=23% Similarity=0.255 Sum_probs=259.0
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
.|+.+.|.++++++|+++|++++++.+||+||.++++++|+.|.+ .|+++||+|+++++|+++
T Consensus 37 ~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~-----------------~g~~~gd~V~i~~~n~~~ 99 (600)
T PRK08279 37 RSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAA-----------------RGVGKGDVVALLMENRPE 99 (600)
T ss_pred ccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHh-----------------cCCCCCCEEEEECCCCHH
Confidence 368899999999999999999999999999999999999999999 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC-cccccCCCCC------CCCCc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA-KFSLIPPVPN------VSSET 153 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~ 153 (372)
++++++||+++|++++|+++.++.+++.++++.++++++|++++..+.+......... .......... +....
T Consensus 100 ~v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (600)
T PRK08279 100 YLAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYEDLA 179 (600)
T ss_pred HHHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHHHh
Confidence 9999999999999999999999999999999999999999998877766665443322 1111111000 00000
Q ss_pred ccccccc---cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHH
Q 017382 154 TVFDQSQ---AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (372)
Q Consensus 154 ~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~ 230 (372)
....... ........++++++|+|||||||.||+|++||+++..++......++++++|++++.+|++|.+++...+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~ 259 (600)
T PRK08279 180 AAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAW 259 (600)
T ss_pred hhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHH
Confidence 0000000 1111234568999999999999999999999999999999888889999999999999999999998777
Q ss_pred HHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEe
Q 017382 231 LAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMC 310 (372)
Q Consensus 231 ~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~ 310 (372)
+.++..|+++++.+.+++..+++. ++++++|++.++|++++.+++.... ......++|.+
T Consensus 260 ~~~l~~G~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~p~l~~~l~~~~~~--------~~~~~~~l~~~-- 319 (600)
T PRK08279 260 SSVLAAGATLALRRKFSASRFWDD----------VRRYRATAFQYIGELCRYLLNQPPK--------PTDRDHRLRLM-- 319 (600)
T ss_pred HHHHhcCcEEEEcCCCCHHHHHHH----------HHHhcceEEeehHHHHHHHHhCCCC--------ccccCcceeEE--
Confidence 888999999999999999999988 7889999999999999988765221 11234567764
Q ss_pred cCCCCCHHHHHHHHHHhCC-ccccccccccccccccCCCCCCCCCCcccccCC
Q 017382 311 GSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRGARKAGTVGNPLP 362 (372)
Q Consensus 311 gG~~~~~~~~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~ 362 (372)
+|+++++++++.|.+.|+. .+++.||+||++...... ....+++|++.+
T Consensus 320 ~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~---~~~~~~~g~~~~ 369 (600)
T PRK08279 320 IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV---FNFDGTVGRVPL 369 (600)
T ss_pred ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc---CCCCcccccccc
Confidence 4788999999999999976 599999999988644322 234566776655
No 74
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-41 Score=331.20 Aligned_cols=336 Identities=23% Similarity=0.298 Sum_probs=262.4
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.|..+++++|+++|+++.++.+||.||.+++.++|..|.+ .|+++||+|+++++|++++
T Consensus 24 ~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~-----------------~gi~~gd~V~i~~~n~~~~ 86 (557)
T PRK07059 24 SLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQS-----------------RGLAKGARVAIMMPNVLQY 86 (557)
T ss_pred CHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCCHHH
Confidence 58899999999999999999999999999999999999999999 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCC-CC-------------
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPP-VP------------- 147 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------- 147 (372)
+++++||+++|++++|+++..+.+++.+++++++++++|+++.....+...........+.+.. ..
T Consensus 87 ~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (557)
T PRK07059 87 PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVV 166 (557)
T ss_pred HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccccccccc
Confidence 9999999999999999999999999999999999999999987766555443221111111100 00
Q ss_pred --------CCC--CCccccc-----ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc----c
Q 017382 148 --------NVS--SETTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE----Y 208 (372)
Q Consensus 148 --------~~~--~~~~~~~-----~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~----~ 208 (372)
.+. ......+ ...........++++++|+|||||||.||+|+++|.+++.++........ .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 246 (557)
T PRK07059 167 RRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEK 246 (557)
T ss_pred ccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccc
Confidence 000 0000000 00011123345789999999999999999999999999876554332221 1
Q ss_pred ---CCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHH
Q 017382 209 ---TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 209 ---~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 284 (372)
...+.+++.+|++|.+++....+.++..|++.++.+. .++..+++. ++++++|.+.++|+++..+.
T Consensus 247 ~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~ 316 (557)
T PRK07059 247 KPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKE----------LKKYQVHIFPAVNTLYNALL 316 (557)
T ss_pred cCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHH----------HHHhCCeeeecCHHHHHHHH
Confidence 1235678899999998876667778888888777664 577888888 78899999999999999988
Q ss_pred HhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCC-CCCCCCcccccCCC
Q 017382 285 QGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPG 363 (372)
Q Consensus 285 ~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~svG~p~~g 363 (372)
+... ....+++++|.++.||+++++.+.+.|.+.+|.++++.||+||++.+++.... .....+++|+|++|
T Consensus 317 ~~~~--------~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g 388 (557)
T PRK07059 317 NNPD--------FDKLDFSKLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPS 388 (557)
T ss_pred cCcC--------cCcCCchhheEEEeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCCCCcCCcccCccCC
Confidence 7522 22346789999999999999999999999999999999999999876553322 23456899999999
Q ss_pred ceEEEeecC
Q 017382 364 VQVSMILLL 372 (372)
Q Consensus 364 ~~i~Ivd~d 372 (372)
++++|+|++
T Consensus 389 ~~v~i~d~~ 397 (557)
T PRK07059 389 TEVSIRDDD 397 (557)
T ss_pred cEEEEECCC
Confidence 999999863
No 75
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.1e-41 Score=326.63 Aligned_cols=317 Identities=21% Similarity=0.285 Sum_probs=255.7
Q ss_pred HHhCCcCCCceEEEe--CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHH
Q 017382 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (372)
Q Consensus 8 ~~~a~~~~~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~ 85 (372)
..+++.+||++|+.+ +++.+||.||.++++++|+.|.+ .|+++||+|+++++|++++++++
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~-----------------~g~~~~~~v~i~~~~~~~~~~~~ 64 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRR-----------------RGCVDGERLAVLARNSVWLVALH 64 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCHHHHHHH
Confidence 356778999999986 68899999999999999999998 49999999999999999999999
Q ss_pred HHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccccccc
Q 017382 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMD 165 (372)
Q Consensus 86 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (372)
+|++++|++++|+++.++.+++.+++++++++++|+++...... .....+..... ...........
T Consensus 65 la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------~~~~~~~~~~~------~~~~~~~~~~~ 130 (488)
T PRK09088 65 FACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDDAVAAGR--------TDVEDLAAFIA------SADALEPADTP 130 (488)
T ss_pred HHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcchhhccc--------ccccchhhhhh------hccccccccCC
Confidence 99999999999999999999999999999999999987543210 00000000000 00000001112
Q ss_pred CCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC
Q 017382 166 GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK 245 (372)
Q Consensus 166 ~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~ 245 (372)
...++++++++|||||||.||+|.+||+++...+...........+|++++.+|++|..++...++.++..|+++++.+.
T Consensus 131 ~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~ 210 (488)
T PRK09088 131 SIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNG 210 (488)
T ss_pred CCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCC
Confidence 23567899999999999999999999999988877777777788999999999999999998778889999999999999
Q ss_pred CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHH
Q 017382 246 FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWET 325 (372)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~ 325 (372)
+++...+..+.+ .++++|+++++|+++..+.+... ....+++++|.+++||++++.+..+.+.+
T Consensus 211 ~~~~~~~~~~~~--------~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~~~~l~~~~~gG~~~~~~~~~~~~~ 274 (488)
T PRK09088 211 FEPKRTLGRLGD--------PALGITHYFCVPQMAQAFRAQPG--------FDAAALRHLTALFTGGAPHAAEDILGWLD 274 (488)
T ss_pred CCHHHHHHHHHh--------hccCCcEEeeHHHHHHHHHhCcC--------cCccccccceEEEecCCCCCHHHHHHHHH
Confidence 999988887421 35899999999999998876421 12335689999999999999999888876
Q ss_pred HhCCccccccccccccccccCCCC---CCCCCCcccccCCCceEEEeecC
Q 017382 326 ITGHRLLERYGMTEFVMAISNPLR---GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 326 ~~~~~l~~~YG~tE~~~~~~~~~~---~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
. |+++++.||+||++.+...... ...+.+++|+|+|+++++|+|.|
T Consensus 275 ~-g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~ 323 (488)
T PRK09088 275 D-GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQ 323 (488)
T ss_pred h-CCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCC
Confidence 5 8999999999999865432111 12456889999999999999864
No 76
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-41 Score=335.56 Aligned_cols=331 Identities=21% Similarity=0.288 Sum_probs=253.8
Q ss_pred CHHHHHHHHhCCcCCCceEEEeC---------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEE
Q 017382 1 MEVFKAAYKKGSMARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V 71 (372)
+|+.+.|.++++.+|+++|+++. .+.+||+||.++++++|+.|.+ .+++||+|
T Consensus 21 ~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~------------------~~~~gd~V 82 (631)
T PRK07769 21 TNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQ------------------VTKPGDRV 82 (631)
T ss_pred CCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHH------------------hcCCCCEE
Confidence 36788999999999999999862 2589999999999999999987 37999999
Q ss_pred EEEcCCCHhHHHHHHHHHhhCceeeeC-CCCCC--HHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC----CcccccC
Q 017382 72 GIVAKPSFEFVAGVLGTWFSGCIAVPL-ALSYP--ESELLHVMHDSDISMVLSTEDYREVLQNVASKSG----AKFSLIP 144 (372)
Q Consensus 72 ~l~~~n~~~~~~~~~A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~ 144 (372)
+++++|++++++++|||+++|++++|+ ++..+ .+++.+++++++++++|++++..+.+........ ..++.+.
T Consensus 83 ~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (631)
T PRK07769 83 AILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVD 162 (631)
T ss_pred EEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcc
Confidence 999999999999999999999999999 45554 6789999999999999999876665544332221 1111111
Q ss_pred CCCCCCCCcccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHH
Q 017382 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVH 224 (372)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 224 (372)
.... . . . .........++++++|+|||||||.||||++||+++...+......+++..+|++++++|++|..
T Consensus 163 ~~~~---~--~-~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 163 AVPD---E--V-G--ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDM 234 (631)
T ss_pred cccc---c--c-c--cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCch
Confidence 1000 0 0 0 00011234578999999999999999999999999998888888888889999999999999999
Q ss_pred HHHHHHHHHHHcCceEEEcCC--C--chhHHHHHHHhhCCCCCCCCCcce---eEeecchHHHHHHHHhhhhccHHHHHh
Q 017382 225 GLFNALLAPLYAGATVEFMPK--F--SVRGIWQRWRESYPVNGNRAGEAI---TAFTGVPTMYTRLIQGYEAMDTELQAA 297 (372)
Q Consensus 225 ~~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~~~~~~~~~~~i~~~~~---t~~~~~p~~~~~l~~~~~~~~~~~~~~ 297 (372)
|+.. ++.+++.|+++++.++ + ++..+++. +.++++ +++..+|+++..+...... . ....
T Consensus 235 gl~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~~~~p~~~~~l~~~~~~-~--~~~~ 300 (631)
T PRK07769 235 GLIT-VLLPALLGHYITFMSPAAFVRRPGRWIRE----------LARKPGGTGGTFSAAPNFAFEHAAARGL-P--KDGE 300 (631)
T ss_pred hhHH-HHHHHhhCCeEEEEChHHHHhCHHHHHHH----------HHhhccccCceEeeCCchHHHHHHhhcc-c--hhcc
Confidence 9975 5566778999888753 4 78888887 566664 7899999988776542100 0 0001
Q ss_pred hhhhccCceEEEecCCCCCHHHHHHHHHHh---CC---ccccccccccccccccCCCCCC--------------------
Q 017382 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT---GH---RLLERYGMTEFVMAISNPLRGA-------------------- 351 (372)
Q Consensus 298 ~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~---~~---~l~~~YG~tE~~~~~~~~~~~~-------------------- 351 (372)
...+++++|.+++||+++++++.+.|.+.| |. .+++.||+||++.+++......
T Consensus 301 ~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 380 (631)
T PRK07769 301 PPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEV 380 (631)
T ss_pred cCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEec
Confidence 134789999999999999999999999987 33 5999999999876554321110
Q ss_pred -------CCCCcccccCCCceEEEeec
Q 017382 352 -------RKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 352 -------~~~~svG~p~~g~~i~Ivd~ 371 (372)
....++|+|+++++++|+|.
T Consensus 381 ~~~~~~~~~~~s~G~~~~~~~~~ivd~ 407 (631)
T PRK07769 381 PADAPNAVAQVSAGKVGVSEWAVIVDP 407 (631)
T ss_pred CCCCCCceeEEeCCCcCCCcEEEEEcC
Confidence 01258999999999999984
No 77
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.9e-41 Score=329.94 Aligned_cols=336 Identities=20% Similarity=0.255 Sum_probs=266.4
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+++.+.+.++++.+|+++|+.+.++.+||.||.+++.++|+.|.+ .|+++||+|+++++|+++
T Consensus 33 ~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~-----------------~g~~~g~~V~i~~~n~~~ 95 (567)
T PRK06178 33 RPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQ-----------------RGVGAGDRVAVFLPNCPQ 95 (567)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCCcH
Confidence 367889999999999999999999999999999999999999998 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCC-------CC--
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV-------SS-- 151 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-- 151 (372)
++++++|++++|++++|++|..+.+++.+++++++++++++++...+.+.+.........+.+...... ..
T Consensus 96 ~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 175 (567)
T PRK06178 96 FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLPD 175 (567)
T ss_pred HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccccccc
Confidence 999999999999999999999999999999999999999999887777666543332221111110000 00
Q ss_pred -----------Ccccccc----cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHh-hcccCCCCeEE
Q 017382 152 -----------ETTVFDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYTSADQFL 215 (372)
Q Consensus 152 -----------~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~d~~l 215 (372)
....... ..........++++++|+|||||||.||+|++||.++......... ...+..+|+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l 255 (567)
T PRK06178 176 SLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFL 255 (567)
T ss_pred ccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEE
Confidence 0000000 0001122345789999999999999999999999999876655443 35678899999
Q ss_pred EecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHH
Q 017382 216 HCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQ 295 (372)
Q Consensus 216 ~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~ 295 (372)
.++|++|..|+...++.+++.|+++++.+++++..++.. ++++++|.+.++|..+..+++...
T Consensus 256 ~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~l~~~~~------- 318 (567)
T PRK06178 256 SFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAA----------VERYRVTRTVMLVDNAVELMDHPR------- 318 (567)
T ss_pred EecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHH----------HHHhCCeEEeccHHHHHHHHhCCC-------
Confidence 999999999987678889999999999999999999998 788999999999999988876421
Q ss_pred HhhhhhccCceEEEe--cCCCCCHHHHHHHHHHhCCcccc-ccccccccccccCCC--C-----CCCCCCcccccCCCce
Q 017382 296 AASASAAKQLRLMMC--GSSALPLPVMQQWETITGHRLLE-RYGMTEFVMAISNPL--R-----GARKAGTVGNPLPGVQ 365 (372)
Q Consensus 296 ~~~~~~l~~lr~v~~--gG~~~~~~~~~~~~~~~~~~l~~-~YG~tE~~~~~~~~~--~-----~~~~~~svG~p~~g~~ 365 (372)
..+.++++++.+.. .|+++++++.+.|++.+|..++. .||+||++....... . ...+++++|+|+||++
T Consensus 319 -~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~ 397 (567)
T PRK06178 319 -FAEYDLSSLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTE 397 (567)
T ss_pred -CCCCCcchheeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcE
Confidence 22345677887654 45899999999999999887775 799999875443211 1 1234578999999999
Q ss_pred EEEeec
Q 017382 366 VSMILL 371 (372)
Q Consensus 366 i~Ivd~ 371 (372)
++|+|+
T Consensus 398 v~v~d~ 403 (567)
T PRK06178 398 FKICDF 403 (567)
T ss_pred EEEEcC
Confidence 999984
No 78
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=4.1e-41 Score=335.54 Aligned_cols=333 Identities=15% Similarity=0.132 Sum_probs=248.5
Q ss_pred HHHHHHHHhCCcCCCceEEEeCC-----ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcC
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQ-----KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~-----~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~ 76 (372)
|+.+.+.++ +++++|+++.+ +++||+||.+++.++|+.|++ +|+++||+|+++++
T Consensus 88 n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~-----------------~Gv~~GdrV~i~~~ 147 (652)
T TIGR01217 88 NYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRA-----------------LGVRPGDRVSGYLP 147 (652)
T ss_pred eHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 455555554 47889988732 589999999999999999998 49999999999999
Q ss_pred CCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch---------HHHHHHHHhhcC--CcccccCC
Q 017382 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---------REVLQNVASKSG--AKFSLIPP 145 (372)
Q Consensus 77 n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~--~~~~~~~~ 145 (372)
|+++++++++||+++|++++|+++.++.+++.+++++++++++|+++.. .+.+.++....+ ..++.+..
T Consensus 148 n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~ 227 (652)
T TIGR01217 148 NIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPY 227 (652)
T ss_pred CCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeC
Confidence 9999999999999999999999999999999999999999999998753 334444433322 11111111
Q ss_pred CCC----C---CCCccccc---c--cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHH-HHHHHHhhcccCCCC
Q 017382 146 VPN----V---SSETTVFD---Q--SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA-QVQMLTEAWEYTSAD 212 (372)
Q Consensus 146 ~~~----~---~~~~~~~~---~--~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~-~~~~~~~~~~~~~~d 212 (372)
... . .......+ . ...........+++++|+|||||||.||||+++|.+++. ........++++++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d 307 (652)
T TIGR01217 228 LGPRETEAPKIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGD 307 (652)
T ss_pred CCCcccccccccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCc
Confidence 000 0 00000000 0 000111234568999999999999999999999999754 344445567889999
Q ss_pred eEEEecCchhHHHHHHHHHHHHHcCceEEEcCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhh
Q 017382 213 QFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (372)
Q Consensus 213 ~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 288 (372)
++++..|+.|+.+. .++.+|+.|+++++.+. .++..+++. ++++++|++..+|+++..+.+...
T Consensus 308 ~~~~~~~~~~~~~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~l~~~~~ 375 (652)
T TIGR01217 308 RLFYYTTTGWMMWN--WLVSGLATGATLVLYDGSPGFPATNVLWDI----------AERTGATLFGTSAKYVMACRKAGV 375 (652)
T ss_pred EEEEeCCcchhhhH--HHHHHHhcCcEEEEECCCCCCCCchHHHHH----------HHHhCCeEEecCHHHHHHHHhcCC
Confidence 99999999998643 25678999999999863 267788888 888999999887777766644210
Q ss_pred hccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhC--Ccccccccccccccccc-CCCCCCCCCCcccccCCCce
Q 017382 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG--HRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQ 365 (372)
Q Consensus 289 ~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~--~~l~~~YG~tE~~~~~~-~~~~~~~~~~svG~p~~g~~ 365 (372)
......++++||.+++||+++++++.+.+.+.++ ..+.+.||+||++.... .........+++|.|.+|++
T Consensus 376 ------~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~ 449 (652)
T TIGR01217 376 ------HPARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTA 449 (652)
T ss_pred ------CccccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCc
Confidence 0123457899999999999999999999998885 45678999999753332 22222345688999999999
Q ss_pred EEEeecC
Q 017382 366 VSMILLL 372 (372)
Q Consensus 366 i~Ivd~d 372 (372)
++|+|+|
T Consensus 450 v~ivd~~ 456 (652)
T TIGR01217 450 VQSWDPE 456 (652)
T ss_pred eEEECCC
Confidence 9999975
No 79
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.5e-41 Score=365.41 Aligned_cols=331 Identities=16% Similarity=0.174 Sum_probs=259.2
Q ss_pred HHHHHHHHhCCcCCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEE
Q 017382 2 EVFKAAYKKGSMARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIG 72 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~ 72 (372)
++++.|.++++.+|+++|+++ +++++||+||.++++++|++|.+. |+++||+|+
T Consensus 237 ~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~ 299 (1389)
T TIGR03443 237 AIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKT-----------------GIKRGDVVM 299 (1389)
T ss_pred cHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEE
Confidence 477889999999999999985 457899999999999999999994 999999999
Q ss_pred EEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch---HHHHHHHHhhcC-----CcccccC
Q 017382 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY---REVLQNVASKSG-----AKFSLIP 144 (372)
Q Consensus 73 l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---~~~~~~~~~~~~-----~~~~~~~ 144 (372)
++++|+++++++++||+++|++++|++|.++.+++.++++.+++++++++... ...+........ .....+.
T Consensus 300 i~~~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1389)
T TIGR03443 300 IYAYRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQ 379 (1389)
T ss_pred EEecCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEec
Confidence 99999999999999999999999999999999999999999999999987642 111111111000 0000010
Q ss_pred CCCCC-----CCC-cccccc----cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeE
Q 017382 145 PVPNV-----SSE-TTVFDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQF 214 (372)
Q Consensus 145 ~~~~~-----~~~-~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~ 214 (372)
..... ... ...... ..........++++++|+|||||||.||||+++|+++...+......+++.++|++
T Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~ 459 (1389)
T TIGR03443 380 DDGSLVGGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKF 459 (1389)
T ss_pred ccccccccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEE
Confidence 00000 000 000000 00011123457899999999999999999999999999998888888899999999
Q ss_pred EEecCchhHHHHHHHHHHHHHcCceEEEcCCC---chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhcc
Q 017382 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPKF---SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (372)
Q Consensus 215 l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~ 291 (372)
+...|++|..++. .++.+|+.|+++++.+.. ++..+++. ++++++|++.++|+++..+....
T Consensus 460 ~~~~~~~~d~~~~-~i~~~L~~G~~l~~~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~~---- 524 (1389)
T TIGR03443 460 TMLSGIAHDPIQR-DMFTPLFLGAQLLVPTADDIGTPGRLAEW----------MAKYGATVTHLTPAMGQLLSAQA---- 524 (1389)
T ss_pred EEecCceecchHH-HHHHHHhCCCEEEEcChhhccCHHHHHHH----------HHHhCCeEEEeCHHHHHHHHhcc----
Confidence 9999999998885 689999999999998753 56677777 78899999999999998886431
Q ss_pred HHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHh-CCccccccccccccccccCC---CCC--------CCCCCcccc
Q 017382 292 TELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNP---LRG--------ARKAGTVGN 359 (372)
Q Consensus 292 ~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~---~~~--------~~~~~svG~ 359 (372)
...++++|.+++||+++++...+.+.+.+ +.+++|.||+||++..++.. ... .....++|+
T Consensus 525 -------~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 597 (1389)
T TIGR03443 525 -------TTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGK 597 (1389)
T ss_pred -------cccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCC
Confidence 23578999999999999999999998876 78999999999997654421 000 113467999
Q ss_pred cCCCceEEEeec
Q 017382 360 PLPGVQVSMILL 371 (372)
Q Consensus 360 p~~g~~i~Ivd~ 371 (372)
|+++++++|+|.
T Consensus 598 ~~~~~~~~ivd~ 609 (1389)
T TIGR03443 598 GMKNVQLLVVNR 609 (1389)
T ss_pred ccCCCEEEEECC
Confidence 999999999985
No 80
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.5e-41 Score=327.02 Aligned_cols=324 Identities=20% Similarity=0.271 Sum_probs=258.0
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.|.+++. ++++|++++++++||.||.++++++|++|+++ .|++++++|+++++|++++
T Consensus 6 ~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~----------------~~~~~~~~V~i~~~n~~~~ 67 (529)
T PRK07867 6 TVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRAR----------------LDPTRPPHVGVLLDNTPEF 67 (529)
T ss_pred cHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEECCCCHHH
Confidence 57788888885 79999999999999999999999999999984 2788999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (372)
+++++||+++|++++|+++..+.+++.+++++++++++|++++..+.+..+.. ....+.+... .+........ ...
T Consensus 68 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~l~~~~-~~~ 143 (529)
T PRK07867 68 SLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDP--GVRVINVDSP-AWADELAAHR-DAE 143 (529)
T ss_pred HHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhcc--CceEEEeccc-cHHHHhcccC-CCC
Confidence 99999999999999999999999999999999999999999887765554321 1111111110 0000000000 001
Q ss_pred ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 162 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
.......++++++|+|||||||.||+|++||+++..+.......+++..+|+++..+|++|..++...++.++..|++++
T Consensus 144 ~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 223 (529)
T PRK07867 144 PPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIA 223 (529)
T ss_pred CCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEE
Confidence 11223467899999999999999999999999999888888888899999999999999999999877888899999999
Q ss_pred EcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHH
Q 017382 242 FMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQ 321 (372)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~ 321 (372)
+.+.+++..+++. ++++++|++.++|+.+..++..... .....+++|. ++||+++++.. +
T Consensus 224 ~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~~~~ll~~~~~--------~~~~~~~lr~-~~gg~~~~~~~-~ 283 (529)
T PRK07867 224 LRRKFSASGFLPD----------VRRYGATYANYVGKPLSYVLATPER--------PDDADNPLRI-VYGNEGAPGDI-A 283 (529)
T ss_pred ecCCCCHHHHHHH----------HHHhCCeEEeccHHHHHHHHhCCCc--------ccccccceEE-EecCCCChHHH-H
Confidence 9999999999988 7889999999999999988764221 1112357885 56888887664 6
Q ss_pred HHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 322 QWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 322 ~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
.|.+.+|.++++.||+||+++...... ....+++|+|++| ++|+|.
T Consensus 284 ~~~~~~g~~l~~~YG~TE~~~~~~~~~--~~~~~~~g~~~~~--~~i~~~ 329 (529)
T PRK07867 284 RFARRFGCVVVDGFGSTEGGVAITRTP--DTPPGALGPLPPG--VAIVDP 329 (529)
T ss_pred HHHHHhCCcEEEeecccccccccccCC--CCCCCCcCCCCCC--EEEEEC
Confidence 777788999999999999986554322 2355789999999 667763
No 81
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=6.8e-41 Score=327.69 Aligned_cols=336 Identities=18% Similarity=0.217 Sum_probs=263.7
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.+.++++ |+++|++++++.+||+||.++++++|+.|.+ .|+++|++|+++++|++++
T Consensus 26 ~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-----------------~g~~~g~~V~v~~~n~~~~ 86 (536)
T PRK10946 26 PLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRR-----------------QGIKPGDTALVQLGNVAEF 86 (536)
T ss_pred cHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCChHHH
Confidence 56788888887 9999999999999999999999999999999 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH-----HHHHHHHhhcC-CcccccCCCCCCCCCccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKSG-AKFSLIPPVPNVSSETTV 155 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 155 (372)
+++++||+++|++++++.+.....++.++++.+++++++++++.. .....+..... ...+..............
T Consensus 87 ~~~~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 166 (536)
T PRK10946 87 YITFFALLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDGEHSLDDA 166 (536)
T ss_pred HHHHHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCCCccHHHH
Confidence 999999999999888877777888899999999999999986421 11222222111 111111111000000000
Q ss_pred cccc-ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH-HHHHH
Q 017382 156 FDQS-QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN-ALLAP 233 (372)
Q Consensus 156 ~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~-~~~~~ 233 (372)
.... .........++++++++|||||||.||+|++||+++...+......+.+.++|++++.+|++|.+++.. .++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~ 246 (536)
T PRK10946 167 INHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGV 246 (536)
T ss_pred hhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHH
Confidence 0000 011122345789999999999999999999999999999988888889999999999999999888753 56788
Q ss_pred HHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCC
Q 017382 234 LYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSS 313 (372)
Q Consensus 234 l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~ 313 (372)
+..|+++++.+.+++..+++. ++++++|++.++|+++..+++.... ......++++|.+++||+
T Consensus 247 l~~g~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~------~~~~~~~~~l~~v~~gg~ 310 (536)
T PRK10946 247 FLAGGTVVLAPDPSATLCFPL----------IEKHQVNVTALVPPAVSLWLQAIAE------GGSRAQLASLKLLQVGGA 310 (536)
T ss_pred hhcCcEEEECCCCCHHHHHHH----------HHHhCCcEEEeChHHHHHHHhhhcc------cCccccccceeEEEECCC
Confidence 999999999998999998888 7889999999999999999875311 112235689999999999
Q ss_pred CCCHHHHHHHHHHhCCccccccccccccccccCC-CCCCCCCCcccccC-CCceEEEeecC
Q 017382 314 ALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPL-PGVQVSMILLL 372 (372)
Q Consensus 314 ~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~~~~~~svG~p~-~g~~i~Ivd~d 372 (372)
++++++.+.|.+.+|+++++.||+||++...... .......+++|+|+ |+++++|+|.+
T Consensus 311 ~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~ 371 (536)
T PRK10946 311 RLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADAD 371 (536)
T ss_pred CCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCccccccccCCcccCCCceEEEECCC
Confidence 9999999999999999999999999976443321 11234568899999 79999999864
No 82
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.9e-41 Score=327.74 Aligned_cols=320 Identities=19% Similarity=0.307 Sum_probs=254.8
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccC-CCCCEEEEEcCCCHh
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAG-GCGARIGIVAKPSFE 80 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv-~~gd~V~l~~~n~~~ 80 (372)
|+.+.+.+++ +|+++|+++++..+||.||.++++++|..|.+ +|+ ++||+|+++++|+++
T Consensus 4 ~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~-----------------~g~~~~~~~V~i~~~n~~~ 64 (540)
T PRK13388 4 TIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIA-----------------LADPDRPLHVGVLLGNTPE 64 (540)
T ss_pred hHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------hcCCCCCCEEEEECCCCcH
Confidence 5667777765 69999999999999999999999999999999 499 799999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (372)
++++++||+++|++++|++|.++.+++.+++++++++++|++++..+.+.+... .....+.+.. ..+..... ....
T Consensus 65 ~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~i~~~~-~~~~~~~~--~~~~ 140 (540)
T PRK13388 65 MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDL-PGVRVLDVDT-PAYAELVA--AAGA 140 (540)
T ss_pred HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcc-cCceEEEccc-hhhhhhhc--cccC
Confidence 999999999999999999999999999999999999999999877665544311 0112222111 00000000 0000
Q ss_pred cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceE
Q 017382 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (372)
Q Consensus 161 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 240 (372)
........++++++|+|||||||.||+|.++|+++...+......+++..+|+++..+|++|..++...++.++..|+++
T Consensus 141 ~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~ 220 (540)
T PRK13388 141 LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAV 220 (540)
T ss_pred cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEE
Confidence 11112346789999999999999999999999999988888888889999999999999999998876666789999999
Q ss_pred EEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHH
Q 017382 241 EFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (372)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~ 320 (372)
++.+.+++..+++. ++++++|++..+|+.+..+...... ......+++.+ + |++++++..
T Consensus 221 v~~~~~~~~~~~~~----------i~~~~vt~~~~~p~~l~~l~~~~~~--------~~~~~~~l~~~-~-G~~~~~~~~ 280 (540)
T PRK13388 221 ALPAKFSASGFLDD----------VRRYGATYFNYVGKPLAYILATPER--------PDDADNPLRVA-F-GNEASPRDI 280 (540)
T ss_pred EECCCCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHhCCCC--------ccccccceEEE-E-CCCCCHHHH
Confidence 99998999999988 8889999999999999888764221 11123456643 3 667788888
Q ss_pred HHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceE
Q 017382 321 QQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQV 366 (372)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i 366 (372)
+.|.+.++.++++.||+||++.++.... ....+++|+|++|+++
T Consensus 281 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~--~~~~~~vG~p~~g~~i 324 (540)
T PRK13388 281 AEFSRRFGCQVEDGYGSSEGAVIVVREP--GTPPGSIGRGAPGVAI 324 (540)
T ss_pred HHHHHHhCCceecccccccccceeecCC--CCCCCCCCCCCCCcEE
Confidence 9999889999999999999987665332 2456899999999775
No 83
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.4e-40 Score=325.95 Aligned_cols=333 Identities=22% Similarity=0.340 Sum_probs=259.2
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.+.++++.+|+++|++.+++.+||.||.++++++|+.|.+ .|+++||+|+++++|++++
T Consensus 22 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~-----------------~gi~~g~~V~i~~~~~~~~ 84 (541)
T TIGR03205 22 TLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLR-----------------AGYGKDASVALYLGNTPDH 84 (541)
T ss_pred CHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChHH
Confidence 57788999999999999999999999999999999999999999 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch--HHHHHHHHhh-cCCcccccCCCC--CC-------
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY--REVLQNVASK-SGAKFSLIPPVP--NV------- 149 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~-~~~~~~~~~~~~--~~------- 149 (372)
+++++|++++|++++|+++..+.+++.++++.++++++|+++.. .+...+.... .....++..... ..
T Consensus 85 ~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (541)
T TIGR03205 85 PINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPI 164 (541)
T ss_pred HHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEeccccccccccccccc
Confidence 99999999999999999999999999999999999999998632 1112121111 111111111100 00
Q ss_pred CCC------cccccc-cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc------ccCCCCeEEE
Q 017382 150 SSE------TTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW------EYTSADQFLH 216 (372)
Q Consensus 150 ~~~------~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~------~~~~~d~~l~ 216 (372)
... ....+. ..........++++++++|||||||.||+|+++|+++....... ..+ .....+++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~ 243 (541)
T TIGR03205 165 PADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVIC 243 (541)
T ss_pred CCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEE
Confidence 000 000000 00111123456899999999999999999999999987654322 111 2234578999
Q ss_pred ecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHH
Q 017382 217 CLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA 296 (372)
Q Consensus 217 ~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~ 296 (372)
..|++|..++...++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+.. .
T Consensus 244 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~--------~ 305 (541)
T TIGR03205 244 VLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRD----------IEEKRATVFPGVPTMWIALANDP--------S 305 (541)
T ss_pred eccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHH----------HHHcCCeEeechHHHHHHHHhCc--------c
Confidence 99999999987778889999999999988999999998 78899999999999999887641 1
Q ss_pred hhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCC-CCCCCCCCcccccCCCceEEEee
Q 017382 297 ASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 297 ~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~~~~~~svG~p~~g~~i~Ivd 370 (372)
....+++++|.+++||+++++++.+.+.+.++.++++.||+||++..++.. ......++++|+|+++++++|++
T Consensus 306 ~~~~~~~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~ 380 (541)
T TIGR03205 306 LEKRDLSSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVS 380 (541)
T ss_pred ccccCccccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEe
Confidence 223467899999999999999999999988899999999999998665532 22234567899999999999875
No 84
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-40 Score=329.03 Aligned_cols=336 Identities=20% Similarity=0.289 Sum_probs=263.7
Q ss_pred CHHHHHHHHhCCcCCCceEEEeC---CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCC
Q 017382 1 MEVFKAAYKKGSMARDSVAIRAD---QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~---~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n 77 (372)
+|+.+.|..+++.+|+++|++++ ++++||+||.++++++|..|.+. .|+++||+|+++++|
T Consensus 10 ~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~----------------~g~~~gd~V~~~~~n 73 (576)
T PRK05620 10 LSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDE----------------LGITGDQRVGSMMYN 73 (576)
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEEeCC
Confidence 57889999999999999999875 37999999999999999999862 499999999999999
Q ss_pred CHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCc--ccccCCCCC------C
Q 017382 78 SFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPN------V 149 (372)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~ 149 (372)
+++++++++||.++|++++|+++..+.+++.++++.++++++|+++...+.+.+........ ++.+..... .
T Consensus 74 ~~e~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 153 (576)
T PRK05620 74 CAEHLEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHM 153 (576)
T ss_pred CHHHHHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhcc
Confidence 99999999999999999999999999999999999999999999988777666554433211 111111000 0
Q ss_pred CC------Ccccccc-cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHH--HhhcccCCCCeEEEecCc
Q 017382 150 SS------ETTVFDQ-SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQML--TEAWEYTSADQFLHCLPL 220 (372)
Q Consensus 150 ~~------~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~--~~~~~~~~~d~~l~~~pl 220 (372)
.. .....+. ..........++++++++|||||||.||+|.++|+++....... ...+.+..+|++++.+|+
T Consensus 154 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl 233 (576)
T PRK05620 154 PEGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPI 233 (576)
T ss_pred ccccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCCh
Confidence 00 0000000 00011223456899999999999999999999999986554432 335678899999999999
Q ss_pred hhHHHHHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhh
Q 017382 221 HHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASA 299 (372)
Q Consensus 221 ~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~ 299 (372)
+|.+++. ..+.++..|+++++.+ .+++..+++. ++++++|+++++|+++..++..... ..
T Consensus 234 ~h~~g~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~--------~~ 294 (576)
T PRK05620 234 YHVLSWG-VPLAAFMSGTPLVFPGPDLSAPTLAKI----------IATAMPRVAHGVPTLWIQLMVHYLK--------NP 294 (576)
T ss_pred HHhhhhH-HHHHHHhcCceEEecCCCCCHHHHHHH----------HHHhcCceeeecCHHHHHHHHHhhc--------cC
Confidence 9999985 4678899999999875 4788888888 7889999999999999988764211 11
Q ss_pred hhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCCC--------CCCCCcccccCCCceEEEeec
Q 017382 300 SAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG--------ARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 300 ~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~--------~~~~~svG~p~~g~~i~Ivd~ 371 (372)
.+..++|.+++||+++++++.+.|.+.+|.++++.||+||++..++..... .....++|++.+|++++|+|+
T Consensus 295 ~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~ 374 (576)
T PRK05620 295 PERMSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND 374 (576)
T ss_pred cccCceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC
Confidence 234589999999999999999999999999999999999998654321111 012357899999999999874
No 85
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.8e-41 Score=328.70 Aligned_cols=335 Identities=19% Similarity=0.281 Sum_probs=261.9
Q ss_pred CHHHHHHHHhCCcCCCceEEEe--CC--ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcC
Q 017382 1 MEVFKAAYKKGSMARDSVAIRA--DQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~--~~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~ 76 (372)
+|+.+.|..+++++||+++++. ++ +++||+||.++++++|+.|.+ .|+++||+|+++++
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~-----------------~g~~~gd~v~i~~~ 72 (542)
T PRK06018 10 LLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDR-----------------DGIKLGDRVATIAW 72 (542)
T ss_pred CCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 4778899999999999999984 23 789999999999999999999 49999999999999
Q ss_pred CCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC--cccccCCCCCCCCC--
Q 017382 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA--KFSLIPPVPNVSSE-- 152 (372)
Q Consensus 77 n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-- 152 (372)
|+++++++++|++++|++++|+++..+.+++.++++.++++.++++.+..+.+.+....... ....+.........
T Consensus 73 ~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (542)
T PRK06018 73 NTWRHLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTL 152 (542)
T ss_pred CchHHHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCc
Confidence 99999999999999999999999999999999999999999999998877776665443321 11111111100000
Q ss_pred ---ccc---ccccc-cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHH--HHHHHHhhcccCCCCeEEEecCchhH
Q 017382 153 ---TTV---FDQSQ-AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA--QVQMLTEAWEYTSADQFLHCLPLHHV 223 (372)
Q Consensus 153 ---~~~---~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~--~~~~~~~~~~~~~~d~~l~~~pl~~~ 223 (372)
... ..... ........++++++|+|||||||.||+|.+||++.+. ........+++..+|+++...|++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~ 232 (542)
T PRK06018 153 KNAVAYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHA 232 (542)
T ss_pred cccccHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHH
Confidence 000 00000 0011234567899999999999999999999997532 22233456678899999999999999
Q ss_pred HHHHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhc
Q 017382 224 HGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAA 302 (372)
Q Consensus 224 ~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l 302 (372)
.++.. .+.++..|+++++.. .+++..+++. ++++++|++.++|+++..+.+.... ...++
T Consensus 233 ~~~~~-~~~~~~~g~~~v~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~~~~l~~~~~~--------~~~~~ 293 (542)
T PRK06018 233 NSWGI-AFSAPSMGTKLVMPGAKLDGASVYEL----------LDTEKVTFTAGVPTVWLMLLQYMEK--------EGLKL 293 (542)
T ss_pred hhhHH-HHhhhhcCceEEccCcCCCHHHHHHH----------HHhcCCceeecCcHHHHHHHhcccc--------cCCCc
Confidence 88854 567789999998874 5678888887 7889999999999999998875322 22356
Q ss_pred cCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCC--CC---------CCCCCcccccCCCceEEEeec
Q 017382 303 KQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL--RG---------ARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 303 ~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~--~~---------~~~~~svG~p~~g~~i~Ivd~ 371 (372)
+++|.+++||+++++++.+.|++ ++.++++.||+||++.+.+... .. .....++|+|++|++++|+|.
T Consensus 294 ~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~ 372 (542)
T PRK06018 294 PHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDD 372 (542)
T ss_pred ccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECC
Confidence 88999999999999999999999 8999999999999986544211 10 012367999999999999986
Q ss_pred C
Q 017382 372 L 372 (372)
Q Consensus 372 d 372 (372)
+
T Consensus 373 ~ 373 (542)
T PRK06018 373 A 373 (542)
T ss_pred C
Confidence 4
No 86
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-41 Score=329.80 Aligned_cols=336 Identities=25% Similarity=0.400 Sum_probs=261.4
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+++.+.+.++++.+|+++|++++++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+++
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~-----------------~gv~~gd~V~i~~~~~~~ 86 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQK-----------------LGVEKGDRVAIMLPNCPQ 86 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCChH
Confidence 367888999999999999999999999999999999999999988 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCC---C-------
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV---S------- 150 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------- 150 (372)
++++++||+++|++++|++|..+.+++.++++.++++.+++++.....+.............+...... .
T Consensus 87 ~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (563)
T PRK06710 87 AVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYPF 166 (563)
T ss_pred HHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccch
Confidence 999999999999999999999999999999999999999999865544333221111110000000000 0
Q ss_pred -------------CC------cccccccccc-cccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHh-hcccC
Q 017382 151 -------------SE------TTVFDQSQAE-KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYT 209 (372)
Q Consensus 151 -------------~~------~~~~~~~~~~-~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~~~~ 209 (372)
.. .......... .......+++++++|||||||.||+|.++|+++..+...... .+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 246 (563)
T PRK06710 167 VQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCK 246 (563)
T ss_pred hhcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCC
Confidence 00 0000000000 011123478999999999999999999999999765443332 23333
Q ss_pred -CCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhh
Q 017382 210 -SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYE 288 (372)
Q Consensus 210 -~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 288 (372)
..+++++.+|++|.++....++.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+...
T Consensus 247 ~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~ 316 (563)
T PRK06710 247 EGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEA----------IKKHKVTLFPGAPTIYIALLNSPL 316 (563)
T ss_pred CCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHH----------HHHcCCeEEeccHHHHHHHHcCCc
Confidence 346889999999999987666778999999999999999999888 788999999999999998876421
Q ss_pred hccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCC-CCCCCCCcccccCCCceEE
Q 017382 289 AMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVS 367 (372)
Q Consensus 289 ~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~svG~p~~g~~i~ 367 (372)
....+++++|.+++||+++++++.+++.+.++.++++.||+||++.++.... ......+++|+|+++++++
T Consensus 317 --------~~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 388 (563)
T PRK06710 317 --------LKEYDISSIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAM 388 (563)
T ss_pred --------cccCChhhhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCccccccCcccccccCCccCCCCCCCeEE
Confidence 1233568899999999999999999999989999999999999987654322 1234467899999999999
Q ss_pred Eeec
Q 017382 368 MILL 371 (372)
Q Consensus 368 Ivd~ 371 (372)
|+|+
T Consensus 389 i~~~ 392 (563)
T PRK06710 389 IMSL 392 (563)
T ss_pred EEEC
Confidence 9984
No 87
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=6.3e-41 Score=329.78 Aligned_cols=337 Identities=21% Similarity=0.299 Sum_probs=262.2
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.|.++++.+|+++|+++.++++||+||.+++.++|+.|.+. .|+++||+|+++++|++++
T Consensus 26 ~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~----------------~g~~~g~~V~i~~~~~~~~ 89 (560)
T PRK08751 26 TVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGE----------------LQLKKGDRVALMMPNCLQY 89 (560)
T ss_pred cHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHH----------------hCCCCCCEEEEECCCCHHH
Confidence 567889999999999999999999999999999999999999732 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCC-------------
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN------------- 148 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 148 (372)
+++++||+++|++++|++|.++.+++.+++++++++++++++.....+.+.................
T Consensus 90 ~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (560)
T PRK08751 90 PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFV 169 (560)
T ss_pred HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhhhhh
Confidence 9999999999999999999999999999999999999999987766655543332211111100000
Q ss_pred -------CCC-----Cccccc-----ccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc----
Q 017382 149 -------VSS-----ETTVFD-----QSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---- 207 (372)
Q Consensus 149 -------~~~-----~~~~~~-----~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~---- 207 (372)
... .....+ ...........++++++++|||||||.||+|.+||.++...+......+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 249 (560)
T PRK08751 170 VKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGK 249 (560)
T ss_pred hhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccc
Confidence 000 000000 00001122345689999999999999999999999999887776655443
Q ss_pred cCCC-CeEEEecCchhHHHHHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHH
Q 017382 208 YTSA-DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQ 285 (372)
Q Consensus 208 ~~~~-d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 285 (372)
+..+ ++++...|++|.+++....+.++..|++.++.+ .+++..+++. ++++++|++.++|+++..+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~ 319 (560)
T PRK08751 250 LEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKE----------LKKTRFTAFTGVNTLFNGLLN 319 (560)
T ss_pred cCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHH----------HHhcceeEecChHHHHHHHHc
Confidence 3333 577888999999998655566677777666544 5678888887 889999999999999999887
Q ss_pred hhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCC-CCCCCCCcccccCCCc
Q 017382 286 GYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGV 364 (372)
Q Consensus 286 ~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~svG~p~~g~ 364 (372)
... ..+.+++++|.+++||+++++++.+.|++.+|.++++.||+||++..++... ......+++|+|++|+
T Consensus 320 ~~~--------~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~ 391 (560)
T PRK08751 320 TPG--------FDQIDFSSLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPST 391 (560)
T ss_pred CcC--------cCCcchhhheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccccccCCCcCccCCCc
Confidence 521 1234678999999999999999999999988999999999999986554322 2234567899999999
Q ss_pred eEEEeecC
Q 017382 365 QVSMILLL 372 (372)
Q Consensus 365 ~i~Ivd~d 372 (372)
+++|+|.+
T Consensus 392 ~v~i~d~~ 399 (560)
T PRK08751 392 DACIKDDA 399 (560)
T ss_pred eEEEECCC
Confidence 99999853
No 88
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=6.8e-41 Score=354.34 Aligned_cols=332 Identities=21% Similarity=0.331 Sum_probs=263.9
Q ss_pred HHHHHHHHhCCcCC-CceEEEe-CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 2 EVFKAAYKKGSMAR-DSVAIRA-DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 2 ~~~~~l~~~a~~~~-~~~al~~-~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
++++.+.++++++| ++.|+.+ +++++||+||.++++++|+.|++ |+++||+|+++++|++
T Consensus 632 ~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~------------------g~~~gd~V~i~~~n~~ 693 (1140)
T PRK06814 632 TLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK------------------NTPPGENVGVMLPNAN 693 (1140)
T ss_pred CHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh------------------cCCCCCeEEEEcCCch
Confidence 45677888888886 5677776 47899999999999999999975 8999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHH--HHHHhhcC--CcccccCCCCC-CCCCcc
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL--QNVASKSG--AKFSLIPPVPN-VSSETT 154 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~-~~~~~~ 154 (372)
+++++++||+++|++++|+++..+.+++.+++++++++++|++++..+.. ........ ...+.++.... ......
T Consensus 694 ~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 773 (1140)
T PRK06814 694 GAAVTFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLADK 773 (1140)
T ss_pred HHHHHHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHHH
Confidence 99999999999999999999999999999999999999999997654432 11111111 11112211100 000000
Q ss_pred cc----cccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHH
Q 017382 155 VF----DQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (372)
Q Consensus 155 ~~----~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~ 230 (372)
.. ...+....+...++|+++|+|||||||.||+|.+||+++..++......++++++|++++.+|++|.+++...+
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 853 (1140)
T PRK06814 774 IKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGL 853 (1140)
T ss_pred HHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHH
Confidence 00 00000011134678999999999999999999999999999888888888999999999999999999997678
Q ss_pred HHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEE
Q 017382 231 LAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMM 309 (372)
Q Consensus 231 ~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~ 309 (372)
+.++..|+++++.+. .+...+.+. ++++++|++.++|+++..+.+.. ...+++++|.++
T Consensus 854 ~~~l~~G~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~l~~l~~~~----------~~~~~~~lr~v~ 913 (1140)
T PRK06814 854 VLPLLSGVKVFLYPSPLHYRIIPEL----------IYDTNATILFGTDTFLNGYARYA----------HPYDFRSLRYVF 913 (1140)
T ss_pred HHHHHcCCEEEEecCcccHHHHHHH----------HHhcCCEEEEecHHHHHHHHhhc----------ccccccceeEEE
Confidence 889999999999875 455566666 78899999999999998886531 234678999999
Q ss_pred ecCCCCCHHHHHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 310 CGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 310 ~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
+||+++++++.+.|.+.+|.++++.||+||++..++.......+.+++|+|+||++++++|.
T Consensus 914 ~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~g~~~~~~~~ 975 (1140)
T PRK06814 914 AGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPMHNKAGTVGRLLPGIEYRLEPV 975 (1140)
T ss_pred EcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCCCCCCCcCCccCCCCeEEEeec
Confidence 99999999999999999999999999999998766544333456789999999999999874
No 89
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=7.2e-41 Score=325.14 Aligned_cols=324 Identities=16% Similarity=0.238 Sum_probs=264.6
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.+.++++.+|+++|+...++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+.++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~-----------------~g~~~~~~V~i~~~~~~~~ 63 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQK-----------------RILPKKSPIIVYGHMEPHM 63 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHH-----------------hCCCCCCeEEEEeCCCHHH
Confidence 57889999999999999999999999999999999999999998 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (372)
+++++||+++|++++|+++.++.+++.++++..+++.++++++....... .....+...... .......
T Consensus 64 ~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~------~~~~~~~~~~~~-----~~~~~~~ 132 (502)
T TIGR01734 64 LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG------TQIITLSALEQA-----ETSGGPV 132 (502)
T ss_pred HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC------CceEEchHhhhh-----hhhcCCc
Confidence 99999999999999999999999999999999999999998764322111 111111100000 0000001
Q ss_pred ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 162 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
.......+++.++++|||||||.||+|.++|+++...+......+.+..+++++...|++|..++. .++.++..|++++
T Consensus 133 ~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~l~~G~~~~ 211 (502)
T TIGR01734 133 SFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVM-DLYPCLASGGTLH 211 (502)
T ss_pred cccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHH-HHHHHHHCCCEEE
Confidence 111223568899999999999999999999999999888888888889999999999999999885 6888999999999
Q ss_pred EcCC---CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHH
Q 017382 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (372)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~ 318 (372)
+.++ .++..+++. +.+++++.+.++|+++..++... ......+++++.++++|++++.+
T Consensus 212 ~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~p~~~~~~l~~~--------~~~~~~~~~l~~~~~~G~~~~~~ 273 (502)
T TIGR01734 212 CLDKDITNNFKLLFEE----------LPKTGLNVWVSTPSFVDMCLLDP--------NFNQENYPHLTHFLFCGEELPVK 273 (502)
T ss_pred EcCHHHhcCHHHHHHH----------HHHcCCeEEEEChhHHHHHHhcc--------ccccccCCcccEEEEcCCcCCHH
Confidence 9886 467778877 78899999999999998776541 12334678999999999999999
Q ss_pred HHHHHHHHh-CCccccccccccccccccCC-----CCCCCCCCcccccCCCceEEEeecC
Q 017382 319 VMQQWETIT-GHRLLERYGMTEFVMAISNP-----LRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 319 ~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~-----~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+.+.+.+.+ ++++++.||+||++..++.. ........++|+|++|++++|+|.+
T Consensus 274 ~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~ 333 (502)
T TIGR01734 274 TAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEE 333 (502)
T ss_pred HHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCC
Confidence 999999988 78999999999987543311 1123445689999999999999864
No 90
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.6e-40 Score=327.60 Aligned_cols=306 Identities=17% Similarity=0.262 Sum_probs=242.7
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
|+.+.|.++++.+|+++|++.+++++||+||.++++++|+.|.+ +|+++||+|+|+++|++++
T Consensus 15 ~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~-----------------~Gl~~gd~Vai~~~n~~e~ 77 (579)
T PLN03102 15 TPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLIS-----------------LNITKNDVVSVLAPNTPAM 77 (579)
T ss_pred cHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCcHHH
Confidence 46678889999999999999999999999999999999999999 5999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC-------CcccccCCCCCCC----
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-------AKFSLIPPVPNVS---- 150 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~---- 150 (372)
++++|||+++|++++|+++.++.+++.++++.++++++|++++..+.+.++..... ...+.++......
T Consensus 78 ~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (579)
T PLN03102 78 YEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPSS 157 (579)
T ss_pred HHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCcc
Confidence 99999999999999999999999999999999999999999877766655433211 1122221111000
Q ss_pred CCccccc---cccc------ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCch
Q 017382 151 SETTVFD---QSQA------EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (372)
Q Consensus 151 ~~~~~~~---~~~~------~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 221 (372)
......+ .... .......++++++|+|||||||.||+|+++|+++..........+.+...++++..+|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 237 (579)
T PLN03102 158 EELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMF 237 (579)
T ss_pred cccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChh
Confidence 0000000 0000 001123568999999999999999999999999765554444455667778999999999
Q ss_pred hHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhh
Q 017382 222 HVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301 (372)
Q Consensus 222 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 301 (372)
|..++. ..+.++..|+++++.+.+++..+++. ++++++|++.++|+++..+.+... .....
T Consensus 238 h~~g~~-~~~~~~~~g~~~v~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~--------~~~~~ 298 (579)
T PLN03102 238 HCNGWT-FTWGTAARGGTSVCMRHVTAPEIYKN----------IEMHNVTHMCCVPTVFNILLKGNS--------LDLSP 298 (579)
T ss_pred hhcchh-HHHHHHHhcCcEEeeccCChHHHHHH----------HHHcCCeEEEeChHHHHHHHhCcc--------cccCC
Confidence 999886 45667889999999998899999988 889999999999999999987521 11223
Q ss_pred ccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccc
Q 017382 302 AKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAI 344 (372)
Q Consensus 302 l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~ 344 (372)
.++++.+++||+++++.+.+.+.+ +|.++++.||+||+++.+
T Consensus 299 ~~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~ 340 (579)
T PLN03102 299 RSGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPV 340 (579)
T ss_pred cccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCccc
Confidence 456788999999999999998875 699999999999987543
No 91
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.2e-41 Score=390.37 Aligned_cols=325 Identities=21% Similarity=0.313 Sum_probs=269.7
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++++.|.++++++|+++|++++++++||+||.++++++|+.|.+ .|+++|++|+++++|++++
T Consensus 512 ~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~-----------------~gv~~g~~V~l~~~~s~~~ 574 (5163)
T PRK12316 512 GVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIE-----------------RGVGPDVLVGVAMERSIEM 574 (5163)
T ss_pred CHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHH
Confidence 57899999999999999999999999999999999999999999 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (372)
+++++|++++|++++|++|.++.+++.++++++++++++++....+.+... .....+.++...... ......
T Consensus 575 i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~ 646 (5163)
T PRK12316 575 VVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLA---AGVQVLDLDRPAAWL-----EGYSEE 646 (5163)
T ss_pred HHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcc---cCceEEEecCcchhh-----ccCCCC
Confidence 999999999999999999999999999999999999999997654332110 011111111111000 000111
Q ss_pred ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 162 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
.......++++++|+|||||||.||||+++|+++.+.+......++++.+|++++..|++|..+++ .++.+|+.|++++
T Consensus 647 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~-~~~~~L~~G~~l~ 725 (5163)
T PRK12316 647 NPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVW-EFFWPLMSGARLV 725 (5163)
T ss_pred CCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHH-HHHHHHhCCCEEE
Confidence 112234678999999999999999999999999999999999999999999999999999999986 6899999999999
Q ss_pred EcC---CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHH
Q 017382 242 FMP---KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (372)
Q Consensus 242 ~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~ 318 (372)
+.+ .+++..+++. ++++++|++.++|++++.+.+.. ...+++++|.+++||++++++
T Consensus 726 i~~~~~~~~~~~~~~~----------i~~~~vt~~~~~Ps~~~~l~~~~----------~~~~~~~l~~~~~gGe~l~~~ 785 (5163)
T PRK12316 726 VAAPGDHRDPAKLVEL----------INREGVDTLHFVPSMLQAFLQDE----------DVASCTSLRRIVCSGEALPAD 785 (5163)
T ss_pred ECCccccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhcc----------ccccCCCccEEEEeeccCCHH
Confidence 986 3788888888 78899999999999999987641 123578999999999999999
Q ss_pred HHHHHHHHh-CCccccccccccccccccC--CCCCCCCCCcccccCCCceEEEeecC
Q 017382 319 VMQQWETIT-GHRLLERYGMTEFVMAISN--PLRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 319 ~~~~~~~~~-~~~l~~~YG~tE~~~~~~~--~~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+.+.|.+.+ +.+++|.||+||+++.++. .........++|+|++|++++|+|.+
T Consensus 786 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~ 842 (5163)
T PRK12316 786 AQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDAN 842 (5163)
T ss_pred HHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCC
Confidence 999998776 7899999999999854432 12223456789999999999999864
No 92
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=5.2e-41 Score=384.07 Aligned_cols=326 Identities=23% Similarity=0.351 Sum_probs=268.8
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++++.|.++++++|+++|++++++.+||+||.++++++|+.|.+. |+++|++|++++++++++
T Consensus 1575 ~~~~~~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~-----------------Gv~~~~~V~l~~~~s~~~ 1637 (3956)
T PRK12467 1575 LVHQLIEDQAAATPEAVALVFGEQELTYGELNRRANRLAHRLIAL-----------------GVGPEVLVGIAVERSLEM 1637 (3956)
T ss_pred cHHHHHHHHHHhCCCCeEEEeCCcEEeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEccCCHHH
Confidence 578899999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (372)
+++++|++++|++++|++|.++.+++.++++++++++++++....+.+... .......++....+. ......
T Consensus 1638 vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~ 1709 (3956)
T PRK12467 1638 VVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLP---DGLRSLVLDQEDDWL-----EGYSDS 1709 (3956)
T ss_pred HHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccc---cCCcEEEeccccchh-----ccCCCC
Confidence 999999999999999999999999999999999999999987654332110 011111111111000 001111
Q ss_pred ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 162 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
.......++++++|+|||||||+||||+++|+++.+.+......++++.+|++++..|++|..+++ .++.+|+.|++++
T Consensus 1710 ~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lv 1788 (3956)
T PRK12467 1710 NPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAADVVLQFTSFAFDVSVW-ELFWPLINGARLV 1788 (3956)
T ss_pred CCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcccEEEEecCccHHHHHH-HHHHHHhCCCEEE
Confidence 122334678999999999999999999999999999999988889999999999999999999986 6889999999999
Q ss_pred EcCC---CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHH
Q 017382 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (372)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~ 318 (372)
+.+. .++..+++. ++++++|++.++|+++..+.+... ...+++++|.+++|||+++++
T Consensus 1789 i~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~~~---------~~~~~~~lr~v~~gGe~l~~~ 1849 (3956)
T PRK12467 1789 IAPPGAHRDPEQLIQL----------IERQQVTTLHFVPSMLQQLLQMDE---------QVEHPLSLRRVVCGGEALEVE 1849 (3956)
T ss_pred EcChhhcCCHHHHHHH----------HHHcCCeEEECCHHHHHHHHhhcc---------ccccCCCceEEEEccccCCHH
Confidence 9874 467888888 888999999999999999876311 123578999999999999999
Q ss_pred HHHHHHHHh-CCccccccccccccccccCCC-----CCCCCCCcccccCCCceEEEeecC
Q 017382 319 VMQQWETIT-GHRLLERYGMTEFVMAISNPL-----RGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 319 ~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~-----~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+.+.|.+.+ +..++|.||+||+++.++... .......++|+|++|++++|+|.+
T Consensus 1850 ~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~ 1909 (3956)
T PRK12467 1850 ALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDAS 1909 (3956)
T ss_pred HHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCC
Confidence 999998887 578999999999986654211 112235789999999999999863
No 93
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=3.6e-41 Score=306.56 Aligned_cols=307 Identities=21% Similarity=0.226 Sum_probs=257.4
Q ss_pred HHHHHHHHhCCcCCCceEEEeCC--ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
|+++.|..+++++|+++|+++++ +++||+|+.+.+.++|+.|..+ |++.||.|++.|+|.+
T Consensus 78 ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~-----------------~l~~GD~VAL~men~p 140 (649)
T KOG1179|consen 78 TIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAE-----------------GLKAGDVVALLMENRP 140 (649)
T ss_pred cHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHh-----------------hcccCCEEEEecCCCh
Confidence 68899999999999999999977 6999999999999999999996 8999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCccc---ccCCCCCCCCCcccc
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFS---LIPPVPNVSSETTVF 156 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 156 (372)
||+.++++++++|++...||+++..+.+.|-++.++++.+|++.+..+.+.++.+.+...-+ ............+..
T Consensus 141 efv~lWlGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~~g~~~L~ 220 (649)
T KOG1179|consen 141 EFVALWLGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVPDGIESLL 220 (649)
T ss_pred hHHHHHHhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999999988887777444332211 111111111101110
Q ss_pred ----ccc----ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH
Q 017382 157 ----DQS----QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (372)
Q Consensus 157 ----~~~----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~ 228 (372)
... +........-.++++.+|||||||.||+.+++|......+.-....+++++.|+++..+|++|.++.+.
T Consensus 221 ~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~il 300 (649)
T KOG1179|consen 221 AKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGIL 300 (649)
T ss_pred HhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHH
Confidence 111 112233445578999999999999999999999998887777788889999999999999999999999
Q ss_pred HHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEE
Q 017382 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (372)
Q Consensus 229 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v 308 (372)
++..++..|+|+++.++|++..+|+. ..+|++|++--.-.+.+.|++.+.+ +...-+++|..
T Consensus 301 Gi~~~l~~GaT~VlrkKFSAS~FW~D----------C~k~~~Tv~QYIGElcRYLl~~p~~--------~~er~HkVRla 362 (649)
T KOG1179|consen 301 GIGGCLLHGATVVLRKKFSASNFWDD----------CRKYNVTVIQYIGELCRYLLNQPPS--------PEERQHKVRLA 362 (649)
T ss_pred HHHHHHhcCceEEEecccchhhhHHH----------HHHhCCeeeehHHHHHHHHHcCCCC--------hhhcCceEEEE
Confidence 99999999999999999999999999 7889999999999999999886432 22244678887
Q ss_pred EecCCCCCHHHHHHHHHHhCCc-ccccccccccccccc
Q 017382 309 MCGSSALPLPVMQQWETITGHR-LLERYGMTEFVMAIS 345 (372)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~~~~-l~~~YG~tE~~~~~~ 345 (372)
+ |..+.+++++.|.+.||+. +.+.||+||......
T Consensus 363 ~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~ 398 (649)
T KOG1179|consen 363 Y--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLV 398 (649)
T ss_pred e--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceee
Confidence 7 8999999999999999875 999999999875444
No 94
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3.2e-40 Score=320.61 Aligned_cols=325 Identities=19% Similarity=0.241 Sum_probs=264.8
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
||+.+.|.++++.+|+++|+..+++++||.||.+++.++|..|.+. |+++|++|+++++|+.+
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~-----------------g~~~~~~v~~~~~~~~~ 64 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSL-----------------KLPDKSPIIVFGHMSPE 64 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEcCCCHH
Confidence 7899999999999999999999999999999999999999999994 99999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQ 160 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (372)
+++.++|++++|++++|+++.++.+++.++++..++++++++++.... .......... ..... ......
T Consensus 65 ~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~~~--~~~~~~ 133 (503)
T PRK04813 65 MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLE------ILGIPVITLD---ELKDI--FATGNP 133 (503)
T ss_pred HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEeccccccc------ccCCcEEehH---Hhhhh--hhcccc
Confidence 999999999999999999999999999999999999999998754110 0000000000 00000 000001
Q ss_pred cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceE
Q 017382 161 AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATV 240 (372)
Q Consensus 161 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 240 (372)
........++++++++|||||||.||+|.++|+++...+......+.+..+++++...|++|..++. .++.++..|+++
T Consensus 134 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~ 212 (503)
T PRK04813 134 YDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVM-DLYPTLASGGTL 212 (503)
T ss_pred ccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHH-HHHHHHhcCCEE
Confidence 1112234568899999999999999999999999999888888888889999999999999999885 578899999999
Q ss_pred EEcCC---CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCH
Q 017382 241 EFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (372)
Q Consensus 241 ~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~ 317 (372)
++.+. .++..+++. ++++++|++..+|+++..+.... .....+++++|.++++|+++++
T Consensus 213 v~~~~~~~~~~~~~~~~----------~~~~~~t~~~~~p~~~~~~~~~~--------~~~~~~~~~l~~i~~~G~~l~~ 274 (503)
T PRK04813 213 VALPKDMTANFKQLFET----------LPQLPINVWVSTPSFADMCLLDP--------SFNEEHLPNLTHFLFCGEELPH 274 (503)
T ss_pred EEcChhhhcCHHHHHHH----------HHHcCCeEEEeChHHHHHHHHhh--------ccCcccCCCceEEEEecCcCCH
Confidence 99886 467778777 78899999999999998765531 1233467899999999999999
Q ss_pred HHHHHHHHHh-CCccccccccccccccccCC---C--CCCCCCCcccccCCCceEEEeecC
Q 017382 318 PVMQQWETIT-GHRLLERYGMTEFVMAISNP---L--RGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 318 ~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~---~--~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
.+.+.+.+.| +..+++.||+||++...+.. . .......++|+|.++++++|+|.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~ 335 (503)
T PRK04813 275 KTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEE 335 (503)
T ss_pred HHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCC
Confidence 9999999998 78999999999987544321 1 112455689999999999999864
No 95
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.3e-40 Score=323.17 Aligned_cols=337 Identities=22% Similarity=0.304 Sum_probs=262.3
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++.+.|.++++.+|+++|+.++++.+||.||.+++.++|..|.+. .|+++||+|+++++|++++
T Consensus 24 ~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~----------------~g~~~g~~V~i~~~~~~~~ 87 (560)
T PRK08974 24 SLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNG----------------LGLKKGDRVALMMPNLLQY 87 (560)
T ss_pred cHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHh----------------cCCCCCCEEEEECCCCHHH
Confidence 477889999999999999999999999999999999999999842 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCC-CCCCC----------
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPP-VPNVS---------- 150 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------- 150 (372)
+++++||+++|++++|+++..+.+++.++++.++++.++++++..+.+.++........+.... .....
T Consensus 88 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (560)
T PRK08974 88 PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFV 167 (560)
T ss_pred HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccch
Confidence 9999999999999999999999999999999999999999877665555443221111111000 00000
Q ss_pred --------------CCcccccc-----cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcc---c
Q 017382 151 --------------SETTVFDQ-----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWE---Y 208 (372)
Q Consensus 151 --------------~~~~~~~~-----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~---~ 208 (372)
......+. ..........++++++|+|||||||.||+|.++|.++..++......+. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~ 247 (560)
T PRK08974 168 VKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLH 247 (560)
T ss_pred hhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccC
Confidence 00000000 0000112245789999999999999999999999999887665443332 2
Q ss_pred CCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhh
Q 017382 209 TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGY 287 (372)
Q Consensus 209 ~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~ 287 (372)
...+.++..+|++|.+++....+.++..|+++++.. ..++..+++. ++++++|.+.++|+++..+.+..
T Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~ 317 (560)
T PRK08974 248 PGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKE----------LKKYPFTAITGVNTLFNALLNNE 317 (560)
T ss_pred CCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHH----------HHhcCcceEcCcHHHHHHHHhCc
Confidence 346788899999999987666677788998877654 4577777777 78899999999999999987652
Q ss_pred hhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCCC-CCCCCCCcccccCCCceE
Q 017382 288 EAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQV 366 (372)
Q Consensus 288 ~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~svG~p~~g~~i 366 (372)
. ....+++++|.+++||+++++.+.+.|.+.+|.++++.||+||++..++... ......+++|+|+||+++
T Consensus 318 ~--------~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 389 (560)
T PRK08974 318 E--------FQELDFSSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEI 389 (560)
T ss_pred C--------cccCCccceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEE
Confidence 1 2234678999999999999999999999988999999999999886655332 223456789999999999
Q ss_pred EEeecC
Q 017382 367 SMILLL 372 (372)
Q Consensus 367 ~Ivd~d 372 (372)
+|+|++
T Consensus 390 ~i~~~~ 395 (560)
T PRK08974 390 KLVDDD 395 (560)
T ss_pred EEECCC
Confidence 999864
No 96
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.9e-40 Score=320.51 Aligned_cols=335 Identities=21% Similarity=0.305 Sum_probs=259.4
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+|+.+.+.++++++||++|+.++++.+||.||.++++++|+.|.+ +|+++||+|+++++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~-----------------~g~~~~~~v~v~~~n~~~ 65 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIA-----------------QGLGPGDHVGIYARNRIE 65 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHH
Confidence 578999999999999999999999999999999999999999998 599999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCc--ccccCCCCCCC------CC
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPNVS------SE 152 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~ 152 (372)
++++++|++++|++++|+++.++.+++.++++++++++++++....+.+.++....... .+.+....... ..
T Consensus 66 ~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (533)
T PRK07798 66 YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDY 145 (533)
T ss_pred HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccH
Confidence 99999999999999999999999999999999999999999987776666654332211 11111111000 00
Q ss_pred cccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---------cc------CCCCeEEEe
Q 017382 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---------EY------TSADQFLHC 217 (372)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---------~~------~~~d~~l~~ 217 (372)
..................+.++|+|||||||.||+|+++|+++..........+ .+ ..+++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (533)
T PRK07798 146 EDALAAGSPERDFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPA 225 (533)
T ss_pred HHHHhccCCcCCCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEe
Confidence 000000001111111234567999999999999999999999876554432211 11 567899999
Q ss_pred cCchhHHHHHHHHHHHHHcCceEEEcC--CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHH-HHHhhhhccHHH
Q 017382 218 LPLHHVHGLFNALLAPLYAGATVEFMP--KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR-LIQGYEAMDTEL 294 (372)
Q Consensus 218 ~pl~~~~~~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~-l~~~~~~~~~~~ 294 (372)
.|++|..+++ .++.+++.|+++++.+ .+++..+++. ++++++|.+.++|..+.. +.+.+.
T Consensus 226 ~pl~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~~~l~~~~~------ 288 (533)
T PRK07798 226 PPLMHGAGQW-AAFAALFSGQTVVLLPDVRFDADEVWRT----------IEREKVNVITIVGDAMARPLLDALE------ 288 (533)
T ss_pred cchhhhhhHH-HHHHHHhcCceEEEecCCCcCHHHHHHH----------HHHhCCeEEEechHHHHHHHHHHhc------
Confidence 9999999997 6888999999999999 7899999998 788999999999876643 443321
Q ss_pred HHhhhhhccCceEEEecCCCCCHHHHHHHHHHh-CCccccccccccccccccCCCCCCCCCCccc--ccCCCceEEEeec
Q 017382 295 QAASASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLERYGMTEFVMAISNPLRGARKAGTVG--NPLPGVQVSMILL 371 (372)
Q Consensus 295 ~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG--~p~~g~~i~Ivd~ 371 (372)
.....+++++|.+++||+++++++.++|.+.+ +..+++.||+||++.+...... ......| ++.++.+++|+|.
T Consensus 289 -~~~~~~~~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~--~~~~~~g~~~~~~~~~~~i~~~ 365 (533)
T PRK07798 289 -ARGPYDLSSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVA--KGAVHTGGPRFTIGPRTVVLDE 365 (533)
T ss_pred -ccccCCCCceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCC--CCCccCCCCccCCCceEEEECC
Confidence 11234678999999999999999999999988 7899999999999755443221 1122334 7889999999986
Q ss_pred C
Q 017382 372 L 372 (372)
Q Consensus 372 d 372 (372)
|
T Consensus 366 ~ 366 (533)
T PRK07798 366 D 366 (533)
T ss_pred C
Confidence 4
No 97
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1e-40 Score=387.13 Aligned_cols=325 Identities=22% Similarity=0.274 Sum_probs=268.9
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++++.|.++++++||++|++++++++||+||.++++++|+.|.+. |+++|++|+++++|++++
T Consensus 4552 ~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~i~~~~s~~~ 4614 (5163)
T PRK12316 4552 CVHQLVAERARMTPDAVAVVFDEEKLTYAELNRRANRLAHALIAR-----------------GVGPEVLVGIAMERSAEM 4614 (5163)
T ss_pred cHHHHHHHHHHhCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 578899999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (372)
+++++||+++|++++|++|.++.+++.+++++++++++|++....+.+... .......+...... ......
T Consensus 4615 iv~~lavl~aG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~---~~~~~~~~~~~~~~------~~~~~~ 4685 (5163)
T PRK12316 4615 MVGLLAVLKAGGAYVPLDPEYPRERLAYMMEDSGAALLLTQSHLLQRLPIP---DGLASLALDRDEDW------EGFPAH 4685 (5163)
T ss_pred HHHHHHHHHhCcEEecCCCCChHHHHHHHHHhcCCCEEEechhhhhhcccc---cCcceEeecchhhc------ccCCcc
Confidence 999999999999999999999999999999999999999987654432110 01111111111000 000111
Q ss_pred ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 162 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
.......++++++|+|||||||.||||+++|+++...+......++++++|++++..|++|..+.+ .++.+|..|++++
T Consensus 4686 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~-~~~~~L~~G~~lv 4764 (5163)
T PRK12316 4686 DPAVRLHPDNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGERYELTPDDRVLQFMSFSFDGSHE-GLYHPLINGASVV 4764 (5163)
T ss_pred CCccCCCCCceEEEEECCCCCCCCCEeeeccHHHHHHHHHHHHhcCCCcCCeEEEecCcchhhHHH-HHHHHHhCCCEEE
Confidence 122344678999999999999999999999999999999998899999999999999999999986 6899999999999
Q ss_pred EcCC--CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHH
Q 017382 242 FMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (372)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~ 319 (372)
+.+. +++..+++. ++++++|+++++|++++.+.+... ...+++++|.+++|||++++++
T Consensus 4765 i~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~~~~l~~~~~---------~~~~~~~lr~v~~gGe~l~~~~ 4825 (5163)
T PRK12316 4765 IRDDSLWDPERLYAE----------IHEHRVTVLVFPPVYLQQLAEHAE---------RDGEPPSLRVYCFGGEAVAQAS 4825 (5163)
T ss_pred EcCcccCCHHHHHHH----------HHHcCCEEEEcCHHHHHHHHhhhc---------cccCCCCccEEEEecccCCHHH
Confidence 9875 378888888 788999999999999999876521 1226789999999999999999
Q ss_pred HHHHHHHh-CCccccccccccccccccCCC--C---CCCCCCcccccCCCceEEEeecC
Q 017382 320 MQQWETIT-GHRLLERYGMTEFVMAISNPL--R---GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 320 ~~~~~~~~-~~~l~~~YG~tE~~~~~~~~~--~---~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
.+.|.+.+ +.+++|.||+||+++.++... . ......++|+|++|++++|+|.+
T Consensus 4826 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~ 4884 (5163)
T PRK12316 4826 YDLAWRALKPVYLFNGYGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNRSGYVLDGQ 4884 (5163)
T ss_pred HHHHHHhCCCCEEEecccCccceEEEEEEEcccccccCCCCCcccccccCCEEEEECCC
Confidence 98888776 789999999999987654221 1 12345789999999999999853
No 98
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.7e-40 Score=382.80 Aligned_cols=326 Identities=18% Similarity=0.262 Sum_probs=269.6
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++++.|.+++.++||++|+++.+..+||+||.++++++|+.|.+ +|+++|++|+|++++++++
T Consensus 3721 ~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~-----------------~gv~~~~~V~v~~~~s~~~ 3783 (4334)
T PRK05691 3721 SYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRA-----------------AGVGVDQPVALLAERGLDL 3783 (4334)
T ss_pred CHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHH
Confidence 57899999999999999999999999999999999999999998 4999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCC---cccccCCCCCCCCCcccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGA---KFSLIPPVPNVSSETTVFDQ 158 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 158 (372)
+++++|++++|++++|++|.++.+++.+++++++++++++++...+........... ....+.. . ......
T Consensus 3784 ~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~ 3857 (4334)
T PRK05691 3784 LGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWE--E----VQAGEV 3857 (4334)
T ss_pred HHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeec--c----cccccc
Confidence 999999999999999999999999999999999999999998765544333222111 0011100 0 000000
Q ss_pred cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCc
Q 017382 159 SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGA 238 (372)
Q Consensus 159 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~ 238 (372)
..........+++.|||+|||||||+||||+++|+++.+.+......+++++.|+++...|++|..+++ .++.++..|+
T Consensus 3858 ~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~-~~~~~l~~G~ 3936 (4334)
T PRK05691 3858 ASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVW-QFLAAPLFGA 3936 (4334)
T ss_pred cccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHH-HHHHHHhCCC
Confidence 111122334678999999999999999999999999999999988899999999999999999999996 6899999999
Q ss_pred eEEEcCC---CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCC
Q 017382 239 TVEFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSAL 315 (372)
Q Consensus 239 ~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~ 315 (372)
++++.+. .++..+++. ++++++|++.++|+++..++... ...+++||.+++|||++
T Consensus 3937 ~l~i~~~~~~~~~~~l~~~----------~~~~~vt~~~~~Ps~~~~l~~~~-----------~~~~~~lr~~~~gGe~l 3995 (4334)
T PRK05691 3937 RVEIVPNAIAHDPQGLLAH----------VQAQGITVLESVPSLIQGMLAED-----------RQALDGLRWMLPTGEAM 3995 (4334)
T ss_pred EEEEcCccccCCHHHHHHH----------HHHcCCeEEEeCHHHHHHHHhhc-----------cccCCCceEEEecCCcC
Confidence 9999875 467788887 78899999999999999887531 22568899999999999
Q ss_pred CHHHHHHHHHHh-CCccccccccccccccccCC----CCCCCCCCcccccCCCceEEEeecC
Q 017382 316 PLPVMQQWETIT-GHRLLERYGMTEFVMAISNP----LRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 316 ~~~~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~----~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
++++.+.|.+.+ +.+++|.||+||++..++.. ........++|+|++|++++|+|.+
T Consensus 3996 ~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~ 4057 (4334)
T PRK05691 3996 PPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEA 4057 (4334)
T ss_pred CHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCC
Confidence 999999998876 78999999999998755421 1112234579999999999999853
No 99
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-40 Score=320.95 Aligned_cols=333 Identities=19% Similarity=0.235 Sum_probs=261.8
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+++.+.|.++++.+|+++|++.+++.+||+||.+++.++|+.|.+ .|+++||+|+++++|+++
T Consensus 10 ~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~-----------------~g~~~g~~V~i~~~n~~~ 72 (540)
T PRK06164 10 DTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAA-----------------QGVRRGDRVAVWLPNCIE 72 (540)
T ss_pred CCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCcHH
Confidence 478899999999999999999999999999999999999999998 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH-----HHHHHHHhhc--C-CcccccC-CCCCCCC
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR-----EVLQNVASKS--G-AKFSLIP-PVPNVSS 151 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~--~-~~~~~~~-~~~~~~~ 151 (372)
++++++||+++|++++|+++..+.+++.++++++++++++++++.. +.+....... . ..+..+. .......
T Consensus 73 ~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (540)
T PRK06164 73 WVVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPA 152 (540)
T ss_pred HHHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCC
Confidence 9999999999999999999999999999999999999999987542 2222221110 0 1111111 0000000
Q ss_pred Cccc-----cc-c--cc--cccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCch
Q 017382 152 ETTV-----FD-Q--SQ--AEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (372)
Q Consensus 152 ~~~~-----~~-~--~~--~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 221 (372)
.... .. . .. ........++++++++|||||||.||+|++||+++...+......+++.+++++++.+|++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~ 232 (540)
T PRK06164 153 PAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFC 232 (540)
T ss_pred CCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCch
Confidence 0000 00 0 00 0001223468899999999999999999999999999998888888999999999999999
Q ss_pred hHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhh
Q 017382 222 HVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASA 301 (372)
Q Consensus 222 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~ 301 (372)
|.+|+. .++.++..|+++++.+.+++..+++. ++++++|+++++|+++..+.+. .....+
T Consensus 233 ~~~g~~-~~~~~l~~G~~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~p~~l~~l~~~---------~~~~~~ 292 (540)
T PRK06164 233 GVFGFS-TLLGALAGGAPLVCEPVFDAARTARA----------LRRHRVTHTFGNDEMLRRILDT---------AGERAD 292 (540)
T ss_pred hHHHHH-HHHHHHhcCceEEecCCCCHHHHHHH----------HHHhCCeeecCCHHHHHHHHHh---------hcccCC
Confidence 999996 68999999999999999999999888 7889999999999999999875 123457
Q ss_pred ccCceEEEecC-CCCCHHHHHHHHHHhCCccccccccccccccccCCCCC---CCCCCcccccC-CCceEEEeec
Q 017382 302 AKQLRLMMCGS-SALPLPVMQQWETITGHRLLERYGMTEFVMAISNPLRG---ARKAGTVGNPL-PGVQVSMILL 371 (372)
Q Consensus 302 l~~lr~v~~gG-~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~---~~~~~svG~p~-~g~~i~Ivd~ 371 (372)
+++++.+..+| .+...+..+.+.+. |+++++.||+||++.+.+..... ..+..++|.|+ ++++++|+|.
T Consensus 293 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~ 366 (540)
T PRK06164 293 FPSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDP 366 (540)
T ss_pred CcceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecC
Confidence 78899887776 45555666666554 89999999999998665432221 23345678886 8999999985
No 100
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.9e-40 Score=337.62 Aligned_cols=322 Identities=14% Similarity=0.185 Sum_probs=252.1
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+|+.+.|.++++++||++|++++++.+||+||.++++++|+.|++ +|+++||+|+|+++|+++
T Consensus 447 ~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~-----------------~Gv~~Gd~VaI~~~n~~e 509 (994)
T PRK07868 447 ISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIA-----------------VGVRQGDRVGVLMETRPS 509 (994)
T ss_pred ccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHH
Confidence 578899999999999999999999999999999999999999999 599999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCC----CC---CCc
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPN----VS---SET 153 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~ 153 (372)
++++++||+++|++++|++|. +++.++++.++++++|++++..+.+... ...++.+..... .. ...
T Consensus 510 ~v~a~lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~----~~~iiv~~~~~~~~~~~~~~~~~~ 582 (994)
T PRK07868 510 ALVAIAALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL----PGRVLVLGGGESRDLDLPDDADVI 582 (994)
T ss_pred HHHHHHHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc----CceEEEecCCccccccCCcchhhh
Confidence 999999999999999999985 6799999999999999997766544322 122222211000 00 000
Q ss_pred cccccccc----c---cccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHH
Q 017382 154 TVFDQSQA----E---KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGL 226 (372)
Q Consensus 154 ~~~~~~~~----~---~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~ 226 (372)
...+.... . ......++++++|+|| ||||+||++.++|.++..........+.+.++|++++.+|++|..++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl 661 (994)
T PRK07868 583 DMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGL 661 (994)
T ss_pred hhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHH
Confidence 00000000 0 0011235899999998 58888888888888776655555566788899999999999999999
Q ss_pred HHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCce
Q 017382 227 FNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLR 306 (372)
Q Consensus 227 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr 306 (372)
...++.++..|+++++.+.++++.+++. ++++++|++.++|+++..+++.. .....+++++|
T Consensus 662 ~~~l~~~l~gG~~vvl~~~~~~~~~~~~----------I~~~~vT~~~~~Ps~l~~L~~~~--------~~~~~~~~slr 723 (994)
T PRK07868 662 LVSLGGAVVGGSRIALSRGLDPDRFVQE----------VRQYGVTVVSYTWAMLREVVDDP--------AFVLHGNHPVR 723 (994)
T ss_pred HHHHHHHhccceEEEecCCCCHHHHHHH----------HHHhCCcEEEeHHHHHHHHHhCc--------CCccCCCCceE
Confidence 7666677778888888888999999999 88999999999999999998741 11223567899
Q ss_pred EEEecCCCCCHHHHHHHHHHhC-CccccccccccccccccCCCCCCCCCCcccccCCCc-eEEEe
Q 017382 307 LMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGV-QVSMI 369 (372)
Q Consensus 307 ~v~~gG~~~~~~~~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~-~i~Iv 369 (372)
.++ |+.+++++++.|.+.|+ .+++|.||+||++.+.+.. ...+.+++|+|+||+ +++|+
T Consensus 724 ~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~~--~~~~~~svG~p~pg~~~v~i~ 784 (994)
T PRK07868 724 LFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLANV--SGAKIGSKGRPLPGAGRVELA 784 (994)
T ss_pred EEe--cCCCCHHHHHHHHHHhCchheeeeeeccccccccccc--CCCCCcccCCccCCCCceeEE
Confidence 876 34599999999999986 7999999999987654432 234678999999998 78775
No 101
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-39 Score=315.39 Aligned_cols=327 Identities=18% Similarity=0.187 Sum_probs=247.1
Q ss_pred HHhCCcCCCceEEEe--CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHH
Q 017382 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (372)
Q Consensus 8 ~~~a~~~~~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~ 85 (372)
..+++.+|+++|+++ +++.+||+||.++++++|+.|.+ .|+++||+|+++++|++++++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~-----------------~gv~~gd~V~i~~~n~~~~~~~~ 66 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYD-----------------AGLRTGDVVALLSDNSPEALVVL 66 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEeCCCHHHHHHH
Confidence 457788999999986 36899999999999999999999 49999999999999999999999
Q ss_pred HHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccccccc
Q 017382 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMD 165 (372)
Q Consensus 86 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (372)
+|++++|++++|+++.++++++.+++++++++.+++++................ ..+... .................
T Consensus 67 la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~ 143 (501)
T PRK13390 67 WAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASAALDGLAAKVGADLPLR-LSFGGE--IDGFGSFEAALAGAGPR 143 (501)
T ss_pred HHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceE-EEecCc--ccccccHHHHhcccCCC
Confidence 999999999999999999999999999999999999875543333222111110 111100 00000000000000011
Q ss_pred CCCCCCcEEEEecCCCCCCCceeee--ehhhHHHHHH----HHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCce
Q 017382 166 GQRGEDPALIVYTSGTTGKPKGVVH--THKSIDAQVQ----MLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (372)
Q Consensus 166 ~~~~~~~a~i~~TSGtTG~pK~v~~--s~~~l~~~~~----~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~ 239 (372)
.....+.++|+|||||||.||+|++ +|.++..... .....+.+..+|+++..+|++|..++... +..+..|++
T Consensus 144 ~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~-~~~~~~g~~ 222 (501)
T PRK13390 144 LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWC-SMVHALGGT 222 (501)
T ss_pred CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHH-HHHHhcCce
Confidence 1122357999999999999999996 4555543221 12335678889999999999999987543 345678999
Q ss_pred EEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHH
Q 017382 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (372)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~ 319 (372)
+++.+.+++..+++. ++++++|++.++|+++..+.+.... .....+++++|.++.||+++++++
T Consensus 223 ~~~~~~~~~~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~l~~v~~~g~~~~~~~ 286 (501)
T PRK13390 223 VVLAKRFDAQATLGH----------VERYRITVTQMVPTMFVRLLKLDAD------VRTRYDVSSLRAVIHAAAPCPVDV 286 (501)
T ss_pred EEEcCCcCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhccch------hcccCChhhhheEEEcCCCCCHHH
Confidence 999999999999998 7889999999999999988764211 112345789999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccccCCC-CCCCCCCcccccCCCceEEEeecC
Q 017382 320 MQQWETITGHRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 320 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~-~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
.+.+.+.+|.++++.||+||+++++.... ......+++|+|++| +++|+|.+
T Consensus 287 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~ 339 (501)
T PRK13390 287 KHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDD 339 (501)
T ss_pred HHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCC
Confidence 99999988999999999999976544222 223456899999999 79999854
No 102
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.5e-40 Score=378.51 Aligned_cols=323 Identities=22% Similarity=0.311 Sum_probs=268.8
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++++.|.++++.+|+++|++++++++||+||.+++.++|+.|++. |+++|++|++++++++++
T Consensus 1132 ~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~-----------------gv~~g~~V~i~~~~s~~~ 1194 (4334)
T PRK05691 1132 WLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDK-----------------GVGPDVCVAIAAERSPQL 1194 (4334)
T ss_pred CHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEEeCCCHHH
Confidence 478899999999999999999999999999999999999999994 999999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (372)
+++++|++++|++++|++|.++.+++.+++++++++++|++......+.... ......+.... .......
T Consensus 1195 iv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~ 1264 (4334)
T PRK05691 1195 LVGLLAILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAE---GVSAIALDSLH-------LDSWPSQ 1264 (4334)
T ss_pred HHHHHHHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhccccc---CceEEeecccc-------ccccCCC
Confidence 9999999999999999999999999999999999999999986544332210 00111111000 0000001
Q ss_pred ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 162 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
.......++++++++|||||||.||||+++|+++...+......++++++|++++..|++|..+++ .++.+|+.|++++
T Consensus 1265 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~-~~~~~L~~G~~l~ 1343 (4334)
T PRK05691 1265 APGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVW-ECFWPLITGCRLV 1343 (4334)
T ss_pred CCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHH-HHHHHHhCCCEEE
Confidence 111234578999999999999999999999999999999888889999999999999999999986 6889999999999
Q ss_pred EcCC---CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHH
Q 017382 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (372)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~ 318 (372)
+.+. .++..+++. ++++++|++.++|++++.+.+... ...++++|.+++||++++++
T Consensus 1344 i~~~~~~~~~~~l~~~----------i~~~~vt~~~~~Ps~l~~l~~~~~----------~~~~~~lr~~~~gGe~l~~~ 1403 (4334)
T PRK05691 1344 LAGPGEHRDPQRIAEL----------VQQYGVTTLHFVPPLLQLFIDEPL----------AAACTSLRRLFSGGEALPAE 1403 (4334)
T ss_pred EcCccccCCHHHHHHH----------HHHcCCeEEECcHHHHHHHHhCcc----------cccCCcccEEEEeecCCCHH
Confidence 9863 678888888 788999999999999999876411 23578999999999999999
Q ss_pred HHHHHHHHh-CCccccccccccccccccCC--CCCCCCCCcccccCCCceEEEeecC
Q 017382 319 VMQQWETIT-GHRLLERYGMTEFVMAISNP--LRGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 319 ~~~~~~~~~-~~~l~~~YG~tE~~~~~~~~--~~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
+.+.|.+.+ +.+++|.||+||+++.++.. ........++|+|++|++++|+|.+
T Consensus 1404 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~ 1460 (4334)
T PRK05691 1404 LRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLDAE 1460 (4334)
T ss_pred HHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEECCC
Confidence 999999887 68999999999998665421 1223456789999999999999864
No 103
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-39 Score=304.92 Aligned_cols=276 Identities=20% Similarity=0.259 Sum_probs=239.3
Q ss_pred EEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeC
Q 017382 19 AIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL 98 (372)
Q Consensus 19 al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l 98 (372)
+++++++++||.||.++++++|+.|.. |+++|++|+++++|+++++++++|++++|++++|+
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~~------------------~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l 62 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQF------------------QEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPI 62 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHHc------------------CCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEec
Confidence 467889999999999999999999854 88999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccccccccCCCCCCcEEEEec
Q 017382 99 ALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYT 178 (372)
Q Consensus 99 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~T 178 (372)
++..+.+++..++++++++++++++.... .. . .....++++++++||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---------------~~---~---------------~~~~~~~~~~~i~~T 109 (414)
T PRK08308 63 HPDTPKEAAIRMAKRAGCHGLLYGESDFT---------------KL---E---------------AVNYLAEEPSLLQYS 109 (414)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEecCcccc---------------cc---c---------------CCCCCCCCceEEEEC
Confidence 99999999999999999999999763100 00 0 011346789999999
Q ss_pred CCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhh
Q 017382 179 SGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRES 258 (372)
Q Consensus 179 SGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~ 258 (372)
|||||.||+|++||+++..++......+....+|+++..+|++|.+++...++.++..|+++++.+.+++..+++.
T Consensus 110 SGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~---- 185 (414)
T PRK08308 110 SGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNI---- 185 (414)
T ss_pred CCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHH----
Confidence 9999999999999999999888888888888999999999999999987788999999999999999999999988
Q ss_pred CCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccc
Q 017382 259 YPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMT 338 (372)
Q Consensus 259 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~t 338 (372)
++++++|.+.++|+++..+.+... ...+++.++++|+++++++.+.|++. +.++++.||+|
T Consensus 186 ------l~~~~~t~~~~~P~~~~~l~~~~~------------~~~~l~~~~~~G~~l~~~~~~~~~~~-~~~~~~~YG~t 246 (414)
T PRK08308 186 ------LRNTPQHILYAVPLMLHILGRLLP------------GTFQFHAVMTSGTPLPEAWFYKLRER-TTYMMQQYGCS 246 (414)
T ss_pred ------HHHhCCeEEEcCHHHHHHHHhcCC------------ccccccEEEEccCCCCHHHHHHHHHh-CChhhhccCcc
Confidence 788999999999999999876421 11368889999999999999999887 67899999999
Q ss_pred cccccccCCCCCCCCCCcccccCCCceEEEee
Q 017382 339 EFVMAISNPLRGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 339 E~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd 370 (372)
|++.+..... ....+++|+|+|++++++.+
T Consensus 247 E~~~~~~~~~--~~~~~~~G~p~~~~~~~~~~ 276 (414)
T PRK08308 247 EAGCVSICPD--MKSHLDLGNPLPHVSVSAGS 276 (414)
T ss_pred ccCCeeecCC--CCCCCccCccCCCeEEEEec
Confidence 9985444222 24567899999999999874
No 104
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=8.7e-39 Score=314.82 Aligned_cols=335 Identities=15% Similarity=0.237 Sum_probs=254.7
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+|.++.+.++++.+|+++|+++++.++||+||.++++++|..|.+ .|+++||+|+++++|+++
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~-----------------~g~~~gd~V~i~~~n~~~ 82 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAK-----------------RSIGPGSTVAVIAPNIPA 82 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEECCCcHH
Confidence 467888899999999999999999999999999999999999998 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC---------CcccccCCCC----
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG---------AKFSLIPPVP---- 147 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---------~~~~~~~~~~---- 147 (372)
++++++||+++|++++|+++.++.+++.++++.++++++|++++..+...+...... ...+.+....
T Consensus 83 ~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (567)
T PLN02479 83 MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPK 162 (567)
T ss_pred HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcc
Confidence 999999999999999999999999999999999999999999877665544332211 0111111100
Q ss_pred CCC-----CCccc---ccccccc--cccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEe
Q 017382 148 NVS-----SETTV---FDQSQAE--KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHC 217 (372)
Q Consensus 148 ~~~-----~~~~~---~~~~~~~--~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~ 217 (372)
... ..... ....... .......++.++++|||||||.||+|++||+++..........+.++.++++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (567)
T PLN02479 163 SLQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWT 242 (567)
T ss_pred ccccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEe
Confidence 000 00000 0000000 0012233467889999999999999999999987766666667788899999999
Q ss_pred cCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHh
Q 017382 218 LPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (372)
Q Consensus 218 ~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~ 297 (372)
+|++|..++...+...+..|.+++ .+.+++..+++. ++++++|++.++|+++..+.+.... .
T Consensus 243 ~p~~h~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~-------~ 304 (567)
T PLN02479 243 LPMFHCNGWCFTWTLAALCGTNIC-LRQVTAKAIYSA----------IANYGVTHFCAAPVVLNTIVNAPKS-------E 304 (567)
T ss_pred cchhhhhhHHHHHHHHhhcCceEe-ccCCCHHHHHHH----------HHHcCCeEEEecHHHHHHHHhhhhh-------c
Confidence 999999988654445566666554 467899999988 8889999999999999998765211 1
Q ss_pred hhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCC---CC-------C-CCCCCcccccCCCce-
Q 017382 298 SASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP---LR-------G-ARKAGTVGNPLPGVQ- 365 (372)
Q Consensus 298 ~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~---~~-------~-~~~~~svG~p~~g~~- 365 (372)
...++++++.++++|+++++.+.+.|++. +.++++.||+||+++.++.. .. . .....++|.|.+|++
T Consensus 305 ~~~~~~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~ 383 (567)
T PLN02479 305 TILPLPRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEG 383 (567)
T ss_pred ccccccceeEEEEcCCCCCHHHHHHHHhc-CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCc
Confidence 11256889999999999999999999876 89999999999986433211 00 0 111246788999886
Q ss_pred EEEeec
Q 017382 366 VSMILL 371 (372)
Q Consensus 366 i~Ivd~ 371 (372)
++|+|.
T Consensus 384 ~~i~d~ 389 (567)
T PLN02479 384 LDVVDT 389 (567)
T ss_pred eeEEcC
Confidence 888873
No 105
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-39 Score=294.81 Aligned_cols=350 Identities=21% Similarity=0.277 Sum_probs=267.9
Q ss_pred HHHHHHHHhCCcCCCceEEEe-----------------------CCceeeHHHHHHHHHHHHHHHhhCCCCccccccccc
Q 017382 2 EVFKAAYKKGSMARDSVAIRA-----------------------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNE 58 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~-----------------------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~ 58 (372)
|+++.+....++++++.++-. +.+++||.|+.+++..+++.|.+
T Consensus 42 Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~------------- 108 (678)
T KOG1180|consen 42 TLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVK------------- 108 (678)
T ss_pred cHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHH-------------
Confidence 577788888888888887742 23689999999999999999999
Q ss_pred ccccccCCCCCE-EEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC
Q 017382 59 NSAVLAGGCGAR-IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG 137 (372)
Q Consensus 59 ~~~~~gv~~gd~-V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 137 (372)
+|.++++. ++++++-+.+|+.+.+||++-+..+|.++.++.++.+.|-|.+++++.+||+.+..+.+.....+..
T Consensus 109 ----lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~ 184 (678)
T KOG1180|consen 109 ----LGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK 184 (678)
T ss_pred ----hCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC
Confidence 59998777 9999999999999999999999999999999999999999999999999999998887776655544
Q ss_pred Cccc--ccCCCC--CCCCCcc-----------ccc--cccc---ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHH
Q 017382 138 AKFS--LIPPVP--NVSSETT-----------VFD--QSQA---EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDA 197 (372)
Q Consensus 138 ~~~~--~~~~~~--~~~~~~~-----------~~~--~~~~---~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~ 197 (372)
.... ..+..+ ...+... +.+ .... .++.+..++|+|+|||||||||.||||+++|+|+++
T Consensus 185 ~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA 264 (678)
T KOG1180|consen 185 TVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVA 264 (678)
T ss_pred ceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHh
Confidence 2222 222111 1000000 000 0000 123344789999999999999999999999999999
Q ss_pred HHHHHHhhc-ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecc
Q 017382 198 QVQMLTEAW-EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (372)
Q Consensus 198 ~~~~~~~~~-~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (372)
.+....... .+.+.|+++.++||.|++.+..++. +++-|+++=..+....-+--..+.+.+ .+-+...+||++.++
T Consensus 265 ~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~-~ft~G~~iGY~S~~TLtdts~ki~kg~--kGD~~~lkPTiM~~V 341 (678)
T KOG1180|consen 265 GVTGVGENVPELGPKDRYIAYLPLAHILELTAELV-CFTWGGRIGYSSPLTLTDTSSKIKKGC--KGDLTELKPTIMAAV 341 (678)
T ss_pred hhhhhcccCcccCCCceEEEechHHHHHHHHHHHH-HHhhCCEeecCCcceecccchhhccCC--cCccccccchhhhhh
Confidence 888876655 6889999999999999999987655 599999988776422111111111111 111667899999999
Q ss_pred hHHHHHHHHhhh----hcc------------------------------HHHHHhhhhhccCceEEEecCCCCCHHHHHH
Q 017382 277 PTMYTRLIQGYE----AMD------------------------------TELQAASASAAKQLRLMMCGSSALPLPVMQQ 322 (372)
Q Consensus 277 p~~~~~l~~~~~----~~~------------------------------~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~ 322 (372)
|..|.++-+... ..+ .-+.........+||++++||+|+++++.+.
T Consensus 342 pAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF 421 (678)
T KOG1180|consen 342 PAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRF 421 (678)
T ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHH
Confidence 999998765311 000 1111334445789999999999999999999
Q ss_pred HHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 323 WETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 323 ~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
+.-.+.+++.++||.||+++..+-....+...+.+|.|++.+++|++|-
T Consensus 422 ~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw 470 (678)
T KOG1180|consen 422 MNICFCCPVLQGYGLTETCAAATVLEPEDFSTGRVGAPLPCCEIKLVDW 470 (678)
T ss_pred HHHhccccccccccccchhcccEecChhhcccccccCCccceEEEEEEh
Confidence 9988899999999999998777655555677889999999999999984
No 106
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-39 Score=316.25 Aligned_cols=333 Identities=17% Similarity=0.253 Sum_probs=254.5
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCC---ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCC
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQ---KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~---~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n 77 (372)
+++.+.+...++.+|+.+++..++ +.+||.||.+++.++|+.|.+ .|+++||+|+++++|
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~-----------------~gi~~gd~V~l~~~n 83 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLA-----------------LGLKPGDRVALIAET 83 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCC
Confidence 367889999999888777654332 679999999999999999998 499999999999999
Q ss_pred CHhHHHHHHHHHhhCceeeeCCCCCC-------HHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCC
Q 017382 78 SFEFVAGVLGTWFSGCIAVPLALSYP-------ESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS 150 (372)
Q Consensus 78 ~~~~~~~~~A~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (372)
+++++++++||+++|++++|+++..+ .+++.++++.++++++++++...+.+.+....... . .+.......
T Consensus 84 ~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 161 (579)
T PRK09192 84 DGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPL-L-HVLSHAWFK 161 (579)
T ss_pred chhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccc-c-ceeehhhhc
Confidence 99999999999999999999976443 68899999999999999998776665554321111 0 110000000
Q ss_pred CCcccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHh-hcccCCCCeEEEecCchhHHHHHHH
Q 017382 151 SETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTE-AWEYTSADQFLHCLPLHHVHGLFNA 229 (372)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~-~~~~~~~d~~l~~~pl~~~~~~~~~ 229 (372)
.. . ..........++++++|+|||||||.||+|.++|+++..++..... .+++..+|+++.++|++|..+++..
T Consensus 162 ---~~-~-~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~ 236 (579)
T PRK09192 162 ---AL-P-EADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGF 236 (579)
T ss_pred ---cc-C-CCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHH
Confidence 00 0 0011122345689999999999999999999999999998887777 7889999999999999999999877
Q ss_pred HHHHHHcCceEEEcCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCc
Q 017382 230 LLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQL 305 (372)
Q Consensus 230 ~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~l 305 (372)
++.++..|+++++.+. .++..+++. +.++++++++..|.++..+...... ......+++++
T Consensus 237 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~~~~~~l~~~~~~~-----~~~~~~~l~~l 301 (579)
T PRK09192 237 LLTPVATQLSVDYLPTRDFARRPLQWLDL----------ISRNRGTISYSPPFGYELCARRVNS-----KDLAELDLSCW 301 (579)
T ss_pred HHHHHHhCCeeEeeCHHHHHHCHHHHHHH----------HHhcCcEEEeCCcHHHHHHHHhhcc-----ccccccchhhh
Confidence 7888999999977763 256777777 7888999877766555555432111 11233567899
Q ss_pred eEEEecCCCCCHHHHHHHHHHhC------CccccccccccccccccCCCCCC----------------------------
Q 017382 306 RLMMCGSSALPLPVMQQWETITG------HRLLERYGMTEFVMAISNPLRGA---------------------------- 351 (372)
Q Consensus 306 r~v~~gG~~~~~~~~~~~~~~~~------~~l~~~YG~tE~~~~~~~~~~~~---------------------------- 351 (372)
|.+++||+++++.+.+.|.+.++ ..+++.||+||+++.++......
T Consensus 302 r~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (579)
T PRK09192 302 RVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRV 381 (579)
T ss_pred heeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccc
Confidence 99999999999999999988873 35899999999976544221110
Q ss_pred CCCCcccccCCCceEEEeecC
Q 017382 352 RKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 352 ~~~~svG~p~~g~~i~Ivd~d 372 (372)
...+++|+|+||++++|+|.|
T Consensus 382 ~~~~~vG~~~p~~~v~i~d~~ 402 (579)
T PRK09192 382 RTFVNCGKALPGHEIEIRNEA 402 (579)
T ss_pred eeEeecCCcCCCcEEEEECCC
Confidence 113579999999999999864
No 107
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=6.7e-39 Score=307.82 Aligned_cols=302 Identities=24% Similarity=0.310 Sum_probs=247.3
Q ss_pred CHHHHHHH-HhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 1 MEVFKAAY-KKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 1 m~~~~~l~-~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
|++.+.+. +.++++|+++|++++++.+||.||.++++++|..|.+. |+++||+|+++++|++
T Consensus 2 ~~~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~-----------------g~~~~~~v~l~~~~~~ 64 (458)
T PRK09029 2 MIFSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQ-----------------GVVEGSGVALRGKNSP 64 (458)
T ss_pred chhhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEecCCCH
Confidence 45555553 44788999999999999999999999999999999994 9999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccc
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQS 159 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (372)
+++++++||+++|++++|+++..+++++.++++++++++++++++... +... . ..... . .
T Consensus 65 ~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~----~--~~~~~--------~-----~ 124 (458)
T PRK09029 65 ETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL----T--SLHLQ--------L-----V 124 (458)
T ss_pred HHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc----c--ccccc--------c-----c
Confidence 999999999999999999999999999999999999999999875422 1110 0 00000 0 0
Q ss_pred ccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCce
Q 017382 160 QAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (372)
Q Consensus 160 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~ 239 (372)
.........++++++++|||||||.||+|.+||+++...+......+++..+|+++..+|++|.+++. .++.++..|++
T Consensus 125 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~-~~~~~l~~G~~ 203 (458)
T PRK09029 125 EGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQG-IVWRWLYAGAT 203 (458)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhH-HHHHHHhCCce
Confidence 00111234578999999999999999999999999999988888888999999999999999999985 46778999999
Q ss_pred EEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHH
Q 017382 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (372)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~ 319 (372)
+++.+. ..+++. + .++|.+..+|+++..+..... ...++|.+++||+++++.+
T Consensus 204 v~~~~~---~~~~~~----------i--~~~t~~~~~P~~~~~l~~~~~------------~~~~l~~i~~gG~~~~~~~ 256 (458)
T PRK09029 204 LVVRDK---QPLEQA----------L--AGCTHASLVPTQLWRLLDNRS------------EPLSLKAVLLGGAAIPVEL 256 (458)
T ss_pred EEeCCh---HHHHHH----------H--hhceeeecChHHHHHHHhccc------------cCCcceEEEECCCCCCHHH
Confidence 999775 344554 3 378999999999998876421 1347999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEee
Q 017382 320 MQQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 320 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd 370 (372)
.+.+.+. |.++++.||+||++...+.... ....++|+|+++++++|+|
T Consensus 257 ~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~--~~~~~~G~~~~~~~~~i~~ 304 (458)
T PRK09029 257 TEQAEQQ-GIRCWCGYGLTEMASTVCAKRA--DGLAGVGSPLPGREVKLVD 304 (458)
T ss_pred HHHHHHc-CCcEeccccccccCcceeccCC--CCCCCCCCCCCCCEEEEeC
Confidence 9998764 9999999999999865543322 2345699999999999986
No 108
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.8e-39 Score=316.96 Aligned_cols=302 Identities=18% Similarity=0.263 Sum_probs=233.1
Q ss_pred CHHHHHHHHhCCcCCCceEEEeC---------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEE
Q 017382 1 MEVFKAAYKKGSMARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARI 71 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V 71 (372)
|++.+.|.+++..+|+++|+++. .+++||.||.+++.++|+.|.+. | ++||+|
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~-----------------g-~~gd~V 62 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRH-----------------G-STGDRA 62 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHh-----------------C-CCCCEE
Confidence 78999999999999999999853 27899999999999999999984 7 689999
Q ss_pred EEEcCCCHhHHHHHHHHHhhCceeeeCCC---CCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC----CcccccC
Q 017382 72 GIVAKPSFEFVAGVLGTWFSGCIAVPLAL---SYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG----AKFSLIP 144 (372)
Q Consensus 72 ~l~~~n~~~~~~~~~A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~ 144 (372)
+++++|+++++++++||+++|++++|+++ ..+.+++.++++++++++++++++..+.+........ ..+..+.
T Consensus 63 ~l~~~n~~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (578)
T PRK05850 63 VILAPQGLEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVD 142 (578)
T ss_pred EEEcCCcccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeec
Confidence 99999999999999999999999999997 4578899999999999999999877666554321110 0011111
Q ss_pred CCCCCCCCcccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc-c-----cCCCCeEEEec
Q 017382 145 PVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW-E-----YTSADQFLHCL 218 (372)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-~-----~~~~d~~l~~~ 218 (372)
... ... ..........++++++|+|||||||.||||+++|+++..++......+ . ...++++++++
T Consensus 143 ~~~-------~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (578)
T PRK05850 143 LLD-------LDS-PRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWL 214 (578)
T ss_pred ccc-------ccc-CCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEEC
Confidence 000 000 000112234568999999999999999999999999988776654432 2 34678999999
Q ss_pred CchhHHHHHHHHHHHHHcCceEEEcCCC----chhHHHHHHHhhCCCCCCCCCcceeEeecchHHH-HHHHHhhhhccHH
Q 017382 219 PLHHVHGLFNALLAPLYAGATVEFMPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMY-TRLIQGYEAMDTE 293 (372)
Q Consensus 219 pl~~~~~~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~-~~l~~~~~~~~~~ 293 (372)
|++|..|++..++.+++.|+++++.+.. ++..+++. +.+++++++ .+|.++ ..+......
T Consensus 215 pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~----------i~~~~~~~~-~~p~~~~~~~~~~~~~---- 279 (578)
T PRK05850 215 PFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQL----------LASNPHAFS-AAPNFAFELAVRKTSD---- 279 (578)
T ss_pred CCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHH----------HHHcCCeEE-eCCcHHHHHHHHhcch----
Confidence 9999999887789999999999998753 57777777 778898865 455554 333332110
Q ss_pred HHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhC------Cccccccccccccccc
Q 017382 294 LQAASASAAKQLRLMMCGSSALPLPVMQQWETITG------HRLLERYGMTEFVMAI 344 (372)
Q Consensus 294 ~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~------~~l~~~YG~tE~~~~~ 344 (372)
......+++++|.+++||+++++++.++|.+.|+ ..+++.||+||++..+
T Consensus 280 -~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 335 (578)
T PRK05850 280 -DDMAGLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYV 335 (578)
T ss_pred -hhhcCcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhhe
Confidence 1223346789999999999999999999998873 3689999999987544
No 109
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.2e-39 Score=311.05 Aligned_cols=330 Identities=18% Similarity=0.191 Sum_probs=256.1
Q ss_pred HHhCCcCCCceEEEe--CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHH
Q 017382 8 YKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (372)
Q Consensus 8 ~~~a~~~~~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~ 85 (372)
..+++.+||++|+++ +++.+||.||.++++++|+.|.+. |+++|++|+++++|++++++++
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~-----------------g~~~~~~V~v~~~~~~~~~~~~ 66 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSL-----------------GLKRGDHVAIFMENNLRYLEVC 66 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHc-----------------CCCCCCEEEEECCCCHHHHHHH
Confidence 367788999999987 578899999999999999999994 9999999999999999999999
Q ss_pred HHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCc--ccccCCCCCCCCCcccccccc-cc
Q 017382 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK--FSLIPPVPNVSSETTVFDQSQ-AE 162 (372)
Q Consensus 86 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~ 162 (372)
+||+++|++++|+++..+.+++.++++.++++.++++......+.+........ .+.+.............+... ..
T Consensus 67 ~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (511)
T PRK13391 67 WAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAGLP 146 (511)
T ss_pred HHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcCCC
Confidence 999999999999999999999999999999999999987766655554332211 111111000000000000000 00
Q ss_pred cccCCCCCCcEEEEecCCCCCCCceeee--ehhhHHH---HHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcC
Q 017382 163 KMDGQRGEDPALIVYTSGTTGKPKGVVH--THKSIDA---QVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAG 237 (372)
Q Consensus 163 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~--s~~~l~~---~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G 237 (372)
.......++.++++|||||||.||+|.+ +|.++.. ........+.+.+++++++..|++|..++. ..+.++..|
T Consensus 147 ~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g 225 (511)
T PRK13391 147 ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQR-AVMLVIRLG 225 (511)
T ss_pred CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHH-HHHHHHHcC
Confidence 1111233467899999999999999995 4665432 233345566788899999999999998886 467789999
Q ss_pred ceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCH
Q 017382 238 ATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPL 317 (372)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~ 317 (372)
+++++.+.+++..+++. ++++++|++.++|+++..+.+.... ...+.+++++|.+++||+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~----------i~~~~~t~~~~~p~~~~~l~~~~~~------~~~~~~~~~l~~~~~gg~~~~~ 289 (511)
T PRK13391 226 GTVIVMEHFDAEQYLAL----------IEEYGVTHTQLVPTMFSRMLKLPEE------VRDKYDLSSLEVAIHAAAPCPP 289 (511)
T ss_pred ceEEECCCCCHHHHHHH----------HHHhCCeEEEehHHHHHHHHhCchh------hcccCCccceeEEEEccCCCCH
Confidence 99999999999999998 7889999999999999988764211 1223467899999999999999
Q ss_pred HHHHHHHHHhCCccccccccccccccccCCCC-CCCCCCcccccCCCceEEEeecC
Q 017382 318 PVMQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 318 ~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
++.+.+.+.+|..+++.||+||++.++..... ....++++|+|++| +++|+|.+
T Consensus 290 ~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~ 344 (511)
T PRK13391 290 QVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDD 344 (511)
T ss_pred HHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCC
Confidence 99999999889999999999999866543222 23556899999999 68998853
No 110
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.7e-38 Score=308.97 Aligned_cols=320 Identities=24% Similarity=0.311 Sum_probs=249.0
Q ss_pred eEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeee
Q 017382 18 VAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP 97 (372)
Q Consensus 18 ~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~ 97 (372)
.|++.+++.+||.||.++++++|+.|.+ +|+++||+|+++++|+++++++++|++++|+++++
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~-----------------~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~ 65 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAA-----------------LGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVP 65 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 4677888999999999999999999999 49999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCC------C--------Cccccccc-ccc
Q 017382 98 LALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVS------S--------ETTVFDQS-QAE 162 (372)
Q Consensus 98 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--------~~~~~~~~-~~~ 162 (372)
+++..+.+++.++++.+++++++++....+.+.+.... ....+......... . .....+.. ...
T Consensus 66 l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (509)
T PRK12406 66 VNWHFKPEEIAYILEDSGARVLIAHADLLHGLASALPA-GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE 144 (509)
T ss_pred cCcccCHHHHHHHHhccCCcEEEEccchhhhhhhhhhc-ccceeecccccccccccccccccccCCCCccCHHHHhcccC
Confidence 99999999999999999999999988766554332211 01111111000000 0 00000000 001
Q ss_pred cccCCCCCCcEEEEecCCCCCCCceeeeehhhH---HHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCce
Q 017382 163 KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSI---DAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT 239 (372)
Q Consensus 163 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l---~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~ 239 (372)
......++++++++|||||||.||+|.++|... ..........+++..++++++..|++|..+... .+.++..|++
T Consensus 145 ~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~ 223 (509)
T PRK12406 145 PYDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAY-GLRAGRLGGV 223 (509)
T ss_pred ccCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHH-HHHHHhhheE
Confidence 112235689999999999999999999876553 343444556678889999999999999988764 4456889999
Q ss_pred EEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHH
Q 017382 240 VEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPV 319 (372)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~ 319 (372)
+++.+.+++..+++. ++++++|++.++|+++..+++.... .....+++++|.++.||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~l~~v~~gg~~~~~~~ 287 (509)
T PRK12406 224 LVLQPRFDPEELLQL----------IERHRITHMHMVPTMFIRLLKLPEE------VRAKYDVSSLRHVIHAAAPCPADV 287 (509)
T ss_pred EEEccCCCHHHHHHH----------HHHcCCeEEEccHHHHHHHHhCchh------hcccCCCCceeEEEEcCCCCCHHH
Confidence 999998999999988 7889999999999999988764211 122346789999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccccCCCC-CCCCCCcccccCCCceEEEeecC
Q 017382 320 MQQWETITGHRLLERYGMTEFVMAISNPLR-GARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 320 ~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~-~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
.+.+.+.++..+++.||+||++.+++.... ...+++++|+|+++++++|+|++
T Consensus 288 ~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 341 (509)
T PRK12406 288 KRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDED 341 (509)
T ss_pred HHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCC
Confidence 999999899999999999999876553322 23466899999999999999864
No 111
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.2e-38 Score=306.38 Aligned_cols=334 Identities=18% Similarity=0.223 Sum_probs=253.7
Q ss_pred CHHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 1 MEVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 1 m~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
|+.++.|.+.++.+|+++|+..++..+||+||.++++++|..|.+ .|+++||+|+++++|+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~-----------------~g~~~g~~v~i~~~~~~~ 80 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALAR-----------------RGIGRGDTVAVLLPNIPA 80 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCchH
Confidence 567889999999999999999999999999999999999999998 499999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCc-ccccCCCCC-CC--------
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK-FSLIPPVPN-VS-------- 150 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~-------- 150 (372)
++++++|++++|++++|+++..+.+++.++++.++++.++++.+..+.+.+........ ...+..... ..
T Consensus 81 ~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (545)
T PRK08162 81 MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGAL 160 (545)
T ss_pred HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCcccc
Confidence 99999999999999999999999999999999999999999998777666544332211 111111100 00
Q ss_pred CCcccccccccc--cccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHH
Q 017382 151 SETTVFDQSQAE--KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFN 228 (372)
Q Consensus 151 ~~~~~~~~~~~~--~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~ 228 (372)
............ .......+++++|+|||||||.||+|+++|+++..........+.+..++++++.+|++|..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~ 240 (545)
T PRK08162 161 DYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCF 240 (545)
T ss_pred cHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHH
Confidence 000000000000 001123457899999999999999999999998777666666677888999999999999998865
Q ss_pred HHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEE
Q 017382 229 ALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (372)
Q Consensus 229 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v 308 (372)
.++. .+.|++.++.+.+++..+++. ++++++|++.++|+++..+.+.... ....+.+.+.+
T Consensus 241 ~~~~-~~~~g~~~~~~~~~~~~~~~~----------l~~~~~t~~~~~P~~~~~l~~~~~~--------~~~~~~~~~~~ 301 (545)
T PRK08162 241 PWTV-AARAGTNVCLRKVDPKLIFDL----------IREHGVTHYCGAPIVLSALINAPAE--------WRAGIDHPVHA 301 (545)
T ss_pred HHHH-HHHccEEEEeCCCCHHHHHHH----------HHHcCCeEEEechHHHHHHHhCccc--------cccCCccceEE
Confidence 4444 445666666677899999998 7889999999999999999875221 11234456677
Q ss_pred EecCCCCCHHHHHHHHHHhCCccccccccccccccccCC-CCC----------CCCCCcccccCCC-ceEEEeec
Q 017382 309 MCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP-LRG----------ARKAGTVGNPLPG-VQVSMILL 371 (372)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-~~~----------~~~~~svG~p~~g-~~i~Ivd~ 371 (372)
+++|++++++..+.+.+. +.++++.||+||+++.+... ... ....+++|.+++. .+++|+|+
T Consensus 302 ~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~ 375 (545)
T PRK08162 302 MVAGAAPPAAVIAKMEEI-GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDP 375 (545)
T ss_pred EECCCCCCHHHHHHHHHh-CCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcC
Confidence 899999999999998764 99999999999986433321 100 1123567777764 45788874
No 112
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=3.2e-38 Score=298.50 Aligned_cols=300 Identities=24% Similarity=0.359 Sum_probs=242.4
Q ss_pred eHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHH
Q 017382 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESEL 107 (372)
Q Consensus 28 Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l 107 (372)
||.||.+.+.++++.|.+. .|+++||+|+++++|++++++.++||+++|++++|+++..+.+++
T Consensus 1 t~~~l~~~~~~~a~~l~~~----------------~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~ 64 (408)
T TIGR01733 1 TYRELDERANRLARHLRAA----------------GGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERL 64 (408)
T ss_pred CHHHHHHHHHHHHHHHHHh----------------hCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHH
Confidence 7999999999999999983 389999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccccccccCCCCCCcEEEEecCCCCCCCce
Q 017382 108 LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKG 187 (372)
Q Consensus 108 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~ 187 (372)
.+++++++++.+++++.....+..... ............. .. .............+++++++|||||||.||+
T Consensus 65 ~~~l~~~~~~~ii~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~ 137 (408)
T TIGR01733 65 AFILEDAGARLLLTDSALASRLAGLVL----PIILVDPLELAAL-DD--APAPPPPDAPSGPDDLAYVIYTSGSTGRPKG 137 (408)
T ss_pred HHHHHhcCCCEEEEcCchhhhccccCC----ceEEechhhhhhc-cc--ccccccccCCCCCCCcEEEEEcCCCCCCCCE
Confidence 999999999999999876554433211 1111110000000 00 0000001111356899999999999999999
Q ss_pred eeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCch---hHHHHHHHhhCCCCCC
Q 017382 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV---RGIWQRWRESYPVNGN 264 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 264 (372)
|.+||+++...+......+.++.+|++++..|++|..++. .++.++..|+++++.+.... ..+...
T Consensus 138 v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~l~~g~~~~~~~~~~~~~~~~~~~~---------- 206 (408)
T TIGR01733 138 VVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVE-EIFGTLLAGATLVVPPEDEERDAALLAAL---------- 206 (408)
T ss_pred EEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHH-HHHHHHhCCCEEEEcChhhccCHHHHHHH----------
Confidence 9999999999999988888999999999999999999986 68889999999999887543 555555
Q ss_pred CCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhC-Ccccccccccccccc
Q 017382 265 RAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG-HRLLERYGMTEFVMA 343 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~-~~l~~~YG~tE~~~~ 343 (372)
++++++|.+.++|.+++.+.+... ..++++|.+++||+++++++++.|.+.++ ..+++.||+||++.+
T Consensus 207 ~~~~~~t~l~~~p~~~~~l~~~~~-----------~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~ 275 (408)
T TIGR01733 207 IAEHPVTVLNLTPSLLALLAAALP-----------PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVW 275 (408)
T ss_pred HHHcCceEEEeCHHHHHHHHHhhh-----------hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEE
Confidence 778899999999999999987521 46789999999999999999999999997 899999999999876
Q ss_pred ccC---CCCCCC--CCCcccccCCCceEEEeecC
Q 017382 344 ISN---PLRGAR--KAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 344 ~~~---~~~~~~--~~~svG~p~~g~~i~Ivd~d 372 (372)
+.. ...... +..++|+|+++++++|+|++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~ 309 (408)
T TIGR01733 276 STATLVDADDAPRESPVPIGRPLANTRLYVLDDD 309 (408)
T ss_pred EEEEEcCccccCCccccccCcccCCceEEEECCC
Confidence 641 111111 27789999999999999874
No 113
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7e-38 Score=307.19 Aligned_cols=329 Identities=21% Similarity=0.284 Sum_probs=253.9
Q ss_pred HHHHHHHHhCCcCCCceEEEe--CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH
Q 017382 2 EVFKAAYKKGSMARDSVAIRA--DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF 79 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~--~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~ 79 (372)
++++.+..+++.+|+.+++.. .++.+||.||.++++++|+.|.+ .|+++||+|+++++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~-----------------~g~~~gd~V~l~~~~~~ 65 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAA-----------------AGVGPGDAVAVLAGAPV 65 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEECCCch
Confidence 577889999999999999965 44689999999999999999999 49999999999999999
Q ss_pred hHHHHHHHHHhhCceeeeCCCCCCHHH-------HHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCC
Q 017382 80 EFVAGVLGTWFSGCIAVPLALSYPESE-------LLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSE 152 (372)
Q Consensus 80 ~~~~~~~A~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (372)
+++++++||+++|++++++++..+.++ +.++++.++++++++++........... .......+.. ..
T Consensus 66 ~~~~~~la~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~---l~-- 139 (545)
T PRK07768 66 EIAPTAQGLWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEE-KGIRVLTVAD---LL-- 139 (545)
T ss_pred HHHHHHHHHHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcc-cCCceeehhh---hc--
Confidence 999999999999999999998877554 4556788999999998765543332211 1111111111 00
Q ss_pred cccccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCC-CeEEEecCchhHHHHHHHHH
Q 017382 153 TTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA-DQFLHCLPLHHVHGLFNALL 231 (372)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~-d~~l~~~pl~~~~~~~~~~~ 231 (372)
.... .......++++++|+|||||||.||+|+++|+++...+......+++..+ |++++++|++|..++...++
T Consensus 140 ----~~~~-~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 214 (545)
T PRK07768 140 ----AADP-IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLT 214 (545)
T ss_pred ----ccCC-CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHH
Confidence 0000 01223457899999999999999999999999999988887777787776 89999999999999876677
Q ss_pred HHHHcCceEEEcCCC----chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceE
Q 017382 232 APLYAGATVEFMPKF----SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRL 307 (372)
Q Consensus 232 ~~l~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~ 307 (372)
.++..|+++++.+.. ++..+++. +++++++++..+|.++..+.+.+.... .....+++++|.
T Consensus 215 ~~l~~g~~~v~~~~~~~~~~~~~~~~~----------i~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~lr~ 280 (545)
T PRK07768 215 VPMYFGAELVKVTPMDFLRDPLLWAEL----------ISKYRGTMTAAPNFAYALLARRLRRQA----KPGAFDLSSLRF 280 (545)
T ss_pred HHHHCCceEEEeCHHHHHHhHHHHHHH----------HHHhCCEEEECchHHHHHHHHHHhccc----cccCCCchheee
Confidence 889999999887642 56666666 788999999888888777665432110 111356789999
Q ss_pred EEecCCCCCHHHHHHHHHH---hCC---ccccccccccccccccCCCCC--------------------------CCCCC
Q 017382 308 MMCGSSALPLPVMQQWETI---TGH---RLLERYGMTEFVMAISNPLRG--------------------------ARKAG 355 (372)
Q Consensus 308 v~~gG~~~~~~~~~~~~~~---~~~---~l~~~YG~tE~~~~~~~~~~~--------------------------~~~~~ 355 (372)
+++||+++++++.+.+.+. +|. .+++.||+||++..++..... ....+
T Consensus 281 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (545)
T PRK07768 281 ALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLA 360 (545)
T ss_pred EEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEE
Confidence 9999999999999999875 555 499999999998654321110 12446
Q ss_pred cccccCCCceEEEeecC
Q 017382 356 TVGNPLPGVQVSMILLL 372 (372)
Q Consensus 356 svG~p~~g~~i~Ivd~d 372 (372)
++|+|++|++++|+|++
T Consensus 361 ~~G~~~~g~~~~i~~~~ 377 (545)
T PRK07768 361 TLGPPLPGLEVRVVDED 377 (545)
T ss_pred eccCCCCCCEEEEECCC
Confidence 89999999999999854
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.5e-38 Score=300.73 Aligned_cols=277 Identities=19% Similarity=0.238 Sum_probs=222.3
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccC-CCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAG-GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYP 103 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv-~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~ 103 (372)
.-+.|+||.++++++|+.|++. |+ +.|++|+++++|+++++++++|++++|++++|+++.++
T Consensus 18 ~~~~~~el~~~~~~~a~~L~~~-----------------g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~ 80 (452)
T PRK07445 18 IGYNSQRFYQLAQQLYLQLQQL-----------------ATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWG 80 (452)
T ss_pred eecChHHHHHHHHHHHHHHHHh-----------------cCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCC
Confidence 3578999999999999999994 77 56999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccccccccCCCCCCcEEEEecCCCCC
Q 017382 104 ESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTG 183 (372)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG 183 (372)
++++.++++++++++++++++..... .. . .. . ......++++++++|||||||
T Consensus 81 ~~~~~~~~~~~~~~~~i~~~~~~~~~-------------~~---~----~~---~----~~~~~~~~~~~~i~~TSGTTG 133 (452)
T PRK07445 81 QQEWQQVLNLVQPDQIWGLDQLKLSH-------------PP---P----LP---S----QGILPNLETGWIMIPTGGSSG 133 (452)
T ss_pred HHHHHHHHHhcCCCEEEecCcccccc-------------CC---C----CC---c----cccCCCCCCcEEEEeCCCCCC
Confidence 99999999999999999876532110 00 0 00 0 001234689999999999999
Q ss_pred CCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCC
Q 017382 184 KPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNG 263 (372)
Q Consensus 184 ~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (372)
.||+|++||+++...+......+.+.+ +++++++|++|.+|+. .++.++..|+++++.+..........
T Consensus 134 ~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~--------- 202 (452)
T PRK07445 134 QIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILPYKRLKSGQEL--------- 202 (452)
T ss_pred CCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHH-HHHHHHHcCCeEEEcChHhccchhhh---------
Confidence 999999999999988887777776654 4678899999999985 57888999999999874332222222
Q ss_pred CCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCcccccccccccccc
Q 017382 264 NRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMA 343 (372)
Q Consensus 264 ~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~ 343 (372)
..+++++++.++|+++..+.+. ...+++++|.+++||+++++++.+.+.+ ++.++++.||+||++..
T Consensus 203 -~~~~~~t~~~~vP~~l~~l~~~-----------~~~~l~~l~~i~~gG~~l~~~~~~~~~~-~~~~l~~~YG~TE~~~~ 269 (452)
T PRK07445 203 -PPNPSDFFLSLVPTQLQRLLQL-----------RPQWLAQFRTILLGGAPAWPSLLEQARQ-LQLRLAPTYGMTETASQ 269 (452)
T ss_pred -hhhcCceEEEehHHHHHHHHhh-----------ChhhhhcceEEEECCccCCHHHHHHHHh-cCCeEecCcchhhhccc
Confidence 3457889999999999998752 1124689999999999999999998876 48999999999998754
Q ss_pred ccCCCCC--CCCCCcccccCCCceEEEe
Q 017382 344 ISNPLRG--ARKAGTVGNPLPGVQVSMI 369 (372)
Q Consensus 344 ~~~~~~~--~~~~~svG~p~~g~~i~Iv 369 (372)
++..... ....+++|+|+||++++|+
T Consensus 270 ~~~~~~~~~~~~~~~~G~~~p~~~v~i~ 297 (452)
T PRK07445 270 IATLKPDDFLAGNNSSGQVLPHAQITIP 297 (452)
T ss_pred ccccCchhhccCCCcCCccCCCCeEEEc
Confidence 4322211 2346789999999999985
No 115
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.8e-38 Score=303.21 Aligned_cols=319 Identities=19% Similarity=0.204 Sum_probs=246.4
Q ss_pred eEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeee
Q 017382 18 VAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVP 97 (372)
Q Consensus 18 ~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~ 97 (372)
.++.++++.+||.||.++++++++.|.+. |+++||+|+++++|+++++++++||+++|++++|
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~-----------------g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 65 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRAL-----------------GLREGDVVAILLENNPEFFEVYWAARRSGLYYTP 65 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHh-----------------CCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEe
Confidence 45667889999999999999999999994 9999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC--CcccccCCCCCCCCCcccccccc-cccccCCCCCCcEE
Q 017382 98 LALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG--AKFSLIPPVPNVSSETTVFDQSQ-AEKMDGQRGEDPAL 174 (372)
Q Consensus 98 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~ 174 (372)
+++.++.+++.+++++++++++++++.....+.+...... ...+.+.... ........+... .........++.++
T Consensus 66 l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~ 144 (502)
T PRK08276 66 INWHLTAAEIAYIVDDSGAKVLIVSAALADTAAELAAELPAGVPLLLVVAGP-VPGFRSYEEALAAQPDTPIADETAGAD 144 (502)
T ss_pred cccccCHHHHHHHHhcCCCCEEEEccchhhHHHHHhhhccccccEEEEeCCC-CCccccHHHHHhcCCCCCCCCCCcceE
Confidence 9999999999999999999999999877766655433322 1111111100 000000000000 01112234567899
Q ss_pred EEecCCCCCCCceeeeehhhHHHHH------HHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCch
Q 017382 175 IVYTSGTTGKPKGVVHTHKSIDAQV------QMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSV 248 (372)
Q Consensus 175 i~~TSGtTG~pK~v~~s~~~l~~~~------~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 248 (372)
++|||||||.||+|.++|.++.... ...........+++++++.|++|..++.. .+.++..|+++++.+.+++
T Consensus 145 i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~-~~~~~~~g~~~~~~~~~~~ 223 (502)
T PRK08276 145 MLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRF-GMSALALGGTVVVMEKFDA 223 (502)
T ss_pred EEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHH-HHHHHhccceEEEcCCCCH
Confidence 9999999999999999988765332 11122222346789999999999999864 4578999999999999999
Q ss_pred hHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhC
Q 017382 249 RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITG 328 (372)
Q Consensus 249 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~ 328 (372)
..+++. ++++++|++.++|+++..+.+.... .....+++++|.+++||++++.++.+.+.+.+|
T Consensus 224 ~~~~~~----------i~~~~~t~~~~~P~~~~~l~~~~~~------~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~ 287 (502)
T PRK08276 224 EEALAL----------IERYRVTHSQLVPTMFVRMLKLPEE------VRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG 287 (502)
T ss_pred HHHHHH----------HHHhCCeEEEehHHHHHHHHhCccc------cCCCCCcccceEEEecCCCCCHHHHHHHHHHhC
Confidence 999988 7889999999999999998865221 112346889999999999999999999999889
Q ss_pred CccccccccccccccccCCC-CCCCCCCcccccCCCceEEEeecC
Q 017382 329 HRLLERYGMTEFVMAISNPL-RGARKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 329 ~~l~~~YG~tE~~~~~~~~~-~~~~~~~svG~p~~g~~i~Ivd~d 372 (372)
..+++.||+||++.+++... ......+++|+|+ +++++|+|.+
T Consensus 288 ~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~ 331 (502)
T PRK08276 288 PIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILDED 331 (502)
T ss_pred cHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEECCC
Confidence 99999999999987544322 2234568899999 8899999853
No 116
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=3.4e-37 Score=320.04 Aligned_cols=326 Identities=13% Similarity=0.109 Sum_probs=241.2
Q ss_pred HHHHHHHHhCCcCCCceEEEe---CC--ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcC
Q 017382 2 EVFKAAYKKGSMARDSVAIRA---DQ--KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAK 76 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~---~~--~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~ 76 (372)
|+.+.+.+.++++|+++|+.. .+ +++||+|+.++++++|+.|.+ +|+++||+|+|+++
T Consensus 428 Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~-----------------lGV~~GDrVaIls~ 490 (1452)
T PTZ00297 428 SLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLA-----------------LGVRPGDVIGVDCE 490 (1452)
T ss_pred CHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHH-----------------cCCCCCCEEEEEcC
Confidence 678899999999999999963 13 689999999999999999999 59999999999999
Q ss_pred CCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCC-C-C---CCC
Q 017382 77 PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPV-P-N---VSS 151 (372)
Q Consensus 77 n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~---~~~ 151 (372)
|+++|+++++||+++|++++|+++. .+++.+++++++++++|++.+..+.+.++....-..++.+... . . ...
T Consensus 491 N~~Ewvia~lA~~~~GaV~VPly~t--~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~ 568 (1452)
T PTZ00297 491 ASRNIVILEVACALYGFTTLPLVGK--GSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVAR 568 (1452)
T ss_pred CCHHHHHHHHHHHHcCCEEEeCCCC--HHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccc
Confidence 9999999999999999999999864 6789999999999999999877766655433211222222210 0 0 000
Q ss_pred --------Ccccccc---cccccccCCCCCCcEEEEe---cCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeE
Q 017382 152 --------ETTVFDQ---SQAEKMDGQRGEDPALIVY---TSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQF 214 (372)
Q Consensus 152 --------~~~~~~~---~~~~~~~~~~~~~~a~i~~---TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~ 214 (372)
....... ..........++|++.|+| ||||||.||||++||+|++.++....... ....+|++
T Consensus 569 ~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~ 648 (1452)
T PTZ00297 569 DLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLM 648 (1452)
T ss_pred cCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEE
Confidence 0000000 0011122346788999996 99999999999999999999988875532 35678999
Q ss_pred EEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccH--
Q 017382 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDT-- 292 (372)
Q Consensus 215 l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~-- 292 (372)
++++|++|+++.. ..+.++..|+++.+ +++..+++. +++++||+++++|.+|.++.+...+...
T Consensus 649 Ls~LPLaHI~er~-~~~~~l~~G~~I~~---~d~~~lled----------L~~~rPTv~~~VPrv~ekI~~~i~~~~~~~ 714 (1452)
T PTZ00297 649 VHFTPFAMLFNRV-FVLGLFAHGSAVAT---VDAAHLQRA----------FVKFQPTILVAAPSLFSTSRLQLSRANERY 714 (1452)
T ss_pred EEechHHHHHHHH-HHHHHHHcCCEEEe---CCHHHHHHH----------HHHHCCEEEEecHHHHHHHHHHHHHHhhhh
Confidence 9999999999975 46777999999874 468888888 8889999999999999988765422110
Q ss_pred --------------------------------HHHHhhhhhccCceEEEecCC--CCCHHHHHHHHHHhCCccccccccc
Q 017382 293 --------------------------------ELQAASASAAKQLRLMMCGSS--ALPLPVMQQWETITGHRLLERYGMT 338 (372)
Q Consensus 293 --------------------------------~~~~~~~~~l~~lr~v~~gG~--~~~~~~~~~~~~~~~~~l~~~YG~t 338 (372)
-+...+.....++|++++||+ +++..+. .++++..+||+|
T Consensus 715 ~~~~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~------~~i~i~~g~glT 788 (1452)
T PTZ00297 715 SAVYSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL------EHISVCYVPCLR 788 (1452)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh------CCceEEEecceE
Confidence 011222334478999999984 4443322 267888999999
Q ss_pred cccccccCCCCCCCCCCcccccCCCceEEEeec
Q 017382 339 EFVMAISNPLRGARKAGTVGNPLPGVQVSMILL 371 (372)
Q Consensus 339 E~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd~ 371 (372)
|+.. .+.....+ ..|+|+||+|+||+|.
T Consensus 789 E~~~---~~~~~~~~--~~G~PlpgvEvKI~~~ 816 (1452)
T PTZ00297 789 EVFF---LPSEGVFC--VDGTPAPSLQVDLEPF 816 (1452)
T ss_pred Eeee---ecCCCCcc--cCCeecCceEEEEccc
Confidence 9532 12222222 3499999999999974
No 117
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2.6e-36 Score=288.08 Aligned_cols=284 Identities=26% Similarity=0.370 Sum_probs=230.6
Q ss_pred eHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHH
Q 017382 28 SYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESEL 107 (372)
Q Consensus 28 Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l 107 (372)
||+||.++++++|+.|.+ .|+++||+|+++++|+++++++++|++++|++++|+++.++.+++
T Consensus 1 Ty~~l~~~~~~~a~~l~~-----------------~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~ 63 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKA-----------------QGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENER 63 (436)
T ss_pred CHHHHHHHHHHHHHHHHH-----------------hCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHH
Confidence 899999999999999999 499999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCcccccccccccccCCCCCCcEEEEecCCCCCCCce
Q 017382 108 LHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKG 187 (372)
Q Consensus 108 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~ 187 (372)
.+++++++++.+++++...... .....+..... ..............+++++++|||||||.||+
T Consensus 64 ~~~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 64 TNQLEDLDVQLLLTDSLLEEKD--------FQADSLDRIEA-------AGRYETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred HHHHHhcCCCEEEEcCcccccc--------eeecchHhhhh-------cccccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 9999999999999987532110 00000000000 00000011123456789999999999999999
Q ss_pred eeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCC
Q 017382 188 VVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAG 267 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (372)
|.++|+++...+......++++++|++++.+|++|..++. .++.++..|+++++.+.++ .+++. +++
T Consensus 129 v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~l~~g~~~~~~~~~~--~~~~~----------l~~ 195 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLS-ILFRWLIEGATLRIVDKFN--QLLEM----------IAN 195 (436)
T ss_pred EEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHH-HHHHHHhcCceEEecchHH--HHHHH----------HHH
Confidence 9999999999998888888999999999999999999885 6888999999999988764 66666 788
Q ss_pred cceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHhCCccccccccccccccccCC
Q 017382 268 EAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNP 347 (372)
Q Consensus 268 ~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~ 347 (372)
+++|++.++|+++..+.+... ..+++|.+++||+++++++.+.+.+ +|..+++.||+||++...+..
T Consensus 196 ~~~t~~~~~P~~l~~l~~~~~------------~~~~l~~~~~~G~~~~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~ 262 (436)
T TIGR01923 196 ERVTHISLVPTQLNRLLDEGG------------HNENLRKILLGGSAIPAPLIEEAQQ-YGLPIYLSYGMTETCSQVTTA 262 (436)
T ss_pred hCCeEEEeHHHHHHHHHhCcC------------CCCceEEEEECCCCCCHHHHHHHHH-hCCceeeEecCCccchhccCc
Confidence 999999999999999887521 1168999999999999999998876 599999999999998655432
Q ss_pred -CCCCCCCCcccccCCCceEEEe
Q 017382 348 -LRGARKAGTVGNPLPGVQVSMI 369 (372)
Q Consensus 348 -~~~~~~~~svG~p~~g~~i~Iv 369 (372)
.+......++|+|+++++++|.
T Consensus 263 ~~~~~~~~~~~G~~~~~~~~~i~ 285 (436)
T TIGR01923 263 TPEMLHARPDVGRPLAGREIKIK 285 (436)
T ss_pred CccccccccCCCccCCCcEEEEE
Confidence 2222222359999999999993
No 118
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.6e-36 Score=294.24 Aligned_cols=281 Identities=18% Similarity=0.154 Sum_probs=209.0
Q ss_pred cCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch------HHHHHHHHhhcCCcccccCCCC-
Q 017382 75 AKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY------REVLQNVASKSGAKFSLIPPVP- 147 (372)
Q Consensus 75 ~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~- 147 (372)
++|++|++++++||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+..+........+.+....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 589999999999999999999999999999999999999999999998642 1222222111111111111000
Q ss_pred --------CCCCCcccc---ccc----ccc-cccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCC
Q 017382 148 --------NVSSETTVF---DQS----QAE-KMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSA 211 (372)
Q Consensus 148 --------~~~~~~~~~---~~~----~~~-~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~ 211 (372)
......... ... ... ......++++++|+|||||||.||||++||++++.........+++..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 000000000 000 000 1112246899999999999999999999999988776666666788899
Q ss_pred CeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhc
Q 017382 212 DQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAM 290 (372)
Q Consensus 212 d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~ 290 (372)
|++++..|++|..++. .++.++..|+++++.+. +++..+++. ++++++|++.++|+++..|++....
T Consensus 161 d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~~~~~~~~----------i~~~~vt~~~~vP~~~~~l~~~~~~- 228 (499)
T PLN03051 161 DVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGGAPLGRGFGKF----------VQDAGVTVLGLVPSIVKAWRHTGAF- 228 (499)
T ss_pred CEEEEccCcceeeehH-HHHHHHHcCCEEEecCCCCCcHHHHHH----------HHHhCCcEEEeCHHHHHHHHhcCcc-
Confidence 9999999999999975 68889999999999874 788888888 8899999999999999998764210
Q ss_pred cHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHHh--CCcccccccccccccccc-CCCCCCCCCCcccccCCCceEE
Q 017382 291 DTELQAASASAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAIS-NPLRGARKAGTVGNPLPGVQVS 367 (372)
Q Consensus 291 ~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~--~~~l~~~YG~tE~~~~~~-~~~~~~~~~~svG~p~~g~~i~ 367 (372)
.....++++||.+++||+++++++.+++.+.+ +.++++.||+||++...+ .......+.+++|+|.+|++++
T Consensus 229 -----~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 303 (499)
T PLN03051 229 -----AMEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFV 303 (499)
T ss_pred -----ccccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEE
Confidence 02234678999999999999999998777643 478999999999864332 2222234568999999999999
Q ss_pred EeecC
Q 017382 368 MILLL 372 (372)
Q Consensus 368 Ivd~d 372 (372)
|+|.+
T Consensus 304 ivd~~ 308 (499)
T PLN03051 304 LLNDN 308 (499)
T ss_pred EECCC
Confidence 99964
No 119
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.3e-36 Score=284.41 Aligned_cols=326 Identities=24% Similarity=0.287 Sum_probs=261.3
Q ss_pred CCCceEEEeC------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHH
Q 017382 14 ARDSVAIRAD------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLG 87 (372)
Q Consensus 14 ~~~~~al~~~------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A 87 (372)
.++.++.+++ ...+||.|+.+++.++|+.|.. +|+++||+|++.+|+.++++++++|
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~-----------------~g~~kGD~V~~~mPm~~e~~ia~lA 140 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRK-----------------CGLKKGDTVAIYMPMIPEAVIAMLA 140 (626)
T ss_pred CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHh-----------------cCCCCCcEEEEeccCChHHHHHHHH
Confidence 5888888863 2458999999999999999997 5999999999999999999999999
Q ss_pred HHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHH---------HHHHhhcCCcccccCCC------CCCCCC
Q 017382 88 TWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL---------QNVASKSGAKFSLIPPV------PNVSSE 152 (372)
Q Consensus 88 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~---------~~~~~~~~~~~~~~~~~------~~~~~~ 152 (372)
|.++|++.+++-..++++++...++.++++++++.+...+.. .+............... ......
T Consensus 141 ~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~ 220 (626)
T KOG1175|consen 141 CARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFW 220 (626)
T ss_pred HhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccH
Confidence 999999999999999999999999999999999987543322 22211111000000000 000000
Q ss_pred ccc-ccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhH-HHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHH
Q 017382 153 TTV-FDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSI-DAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNAL 230 (372)
Q Consensus 153 ~~~-~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l-~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~ 230 (372)
... ....+...+...+.+|+.+|+|||||||.||++.+++... +..+.....++.++++|++.+..-+.|+.+.+...
T Consensus 221 ~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~ 300 (626)
T KOG1175|consen 221 SLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVL 300 (626)
T ss_pred HHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhh
Confidence 111 1112222355667789999999999999999999988864 45555566778999999999999999999999888
Q ss_pred HHHHHcCceEEEcCC--CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEE
Q 017382 231 LAPLYAGATVEFMPK--FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLM 308 (372)
Q Consensus 231 ~~~l~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v 308 (372)
+.+|++|+++++.+. +++..+++. +.++++|+++..|+.++.+.+... .....++.++||.+
T Consensus 301 ~gpl~~Ga~~vl~~g~p~~~~~~~~~----------v~k~~it~l~t~pt~~r~l~~~~~------~~~~~~~~~sLk~~ 364 (626)
T KOG1175|consen 301 YGPLLNGATVVLYEGPPFDPGRIWKI----------LDKYKVTVLYTAPTAYRLLRRLGQ------EDVTSYSLKSLRTC 364 (626)
T ss_pred hhhhhcCcEEEEEcCCCCChhhhhhh----------HhhcceEEEEeccHHHHHHHHhcc------ccccccccceEEEE
Confidence 889999999999974 578889988 899999999999999998876533 24445566889999
Q ss_pred EecCCCCCHHHHHHHHHHhCC-ccccccccccccccccCCCCCC--CCCCcccccCCCceEEEeecC
Q 017382 309 MCGSSALPLPVMQQWETITGH-RLLERYGMTEFVMAISNPLRGA--RKAGTVGNPLPGVQVSMILLL 372 (372)
Q Consensus 309 ~~gG~~~~~~~~~~~~~~~~~-~l~~~YG~tE~~~~~~~~~~~~--~~~~svG~p~~g~~i~Ivd~d 372 (372)
.++||+++++.++.|.+.++. +|++.||+||+|..++.+.... -++++.|+|.+|+++.|.|++
T Consensus 365 ~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~ 431 (626)
T KOG1175|consen 365 GSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDEN 431 (626)
T ss_pred eecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCC
Confidence 999999999999999999987 6999999999998777554444 788999999999999999974
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.97 E-value=2e-29 Score=252.13 Aligned_cols=322 Identities=24% Similarity=0.350 Sum_probs=255.0
Q ss_pred HHHHHHHHhCCcCCCceEEEeCCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH
Q 017382 2 EVFKAAYKKGSMARDSVAIRADQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF 81 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~ 81 (372)
++++.|...+...|++.|++..+.++||+|+..++.++|+.|.+. |+++++.|+++.+.+.+.
T Consensus 228 ~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~-----------------g~~~~~~V~i~~~rs~~~ 290 (642)
T COG1020 228 TIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISL-----------------GVGPGETVAILADRSLEL 290 (642)
T ss_pred hHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHc-----------------CCCCCCeEEEEcCCCHHH
Confidence 578899999999999999999999999999999999999999994 899999999999999999
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCcccccCCCCCCCCCccccccccc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNVSSETTVFDQSQA 161 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (372)
++.++|++++|+.++|+++..+.+.+..+++++++..+++.......... ... +.+.. .... .....
T Consensus 291 i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~--~~~~-----~~~~~ 357 (642)
T COG1020 291 VVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG----LPG--LALDD--ALSE-----IPDTD 357 (642)
T ss_pred HHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEecccccccccc----CCc--ccccc--cccc-----CCccC
Confidence 99999999999999999999999999999999999999998432111000 000 00000 0000 00000
Q ss_pred ccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 162 EKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 162 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
.......+++.++++|||||||.||||..+|+++.+.+......+.....|+++...++++..+.+ .++.++..|++++
T Consensus 358 ~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~-~~f~~l~~G~~l~ 436 (642)
T COG1020 358 PIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVF-EIFGALLEGARLV 436 (642)
T ss_pred cccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHH-HHHHHHhCCCEEE
Confidence 001233558999999999999999999999999999888888889999999999999999988886 6999999999999
Q ss_pred EcCC---CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHH
Q 017382 242 FMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLP 318 (372)
Q Consensus 242 ~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~ 318 (372)
+.+. .++..+.+. +.++++|++..+|.++..+...... .........+|.+++||+.++.+
T Consensus 437 ~~~~~~~~~~~~l~~~----------~~~~~vt~~~~~p~~~~~~~~~~~~------~~~~~~~~~lr~~~~gGe~l~~~ 500 (642)
T COG1020 437 LAPALLQVDPAALLEL----------LEAQGITVLLLVPLLLRLLLLAALA------PDLISPCERLRQLLSGGEALPLA 500 (642)
T ss_pred ecCccccCCHHHHHHH----------HHHcCCEEEEecHHHHHHHHhchhh------ccccCCcccccEEEEcCCCCCHH
Confidence 9985 466777776 6788999999999999988764110 00111223599999999999999
Q ss_pred HHHHHHHHh--CCccccccccccccccccCCCCC--CCCCCcccccCCCceEEEee
Q 017382 319 VMQQWETIT--GHRLLERYGMTEFVMAISNPLRG--ARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 319 ~~~~~~~~~--~~~l~~~YG~tE~~~~~~~~~~~--~~~~~svG~p~~g~~i~Ivd 370 (372)
+.+.+.... ...+.|.||.||+...+...... ......+|+|+++++++|+|
T Consensus 501 ~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild 556 (642)
T COG1020 501 LVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD 556 (642)
T ss_pred HHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC
Confidence 999998765 46899999999965544321111 11146899999999999988
No 121
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=6.5e-27 Score=202.07 Aligned_cols=207 Identities=18% Similarity=0.179 Sum_probs=156.6
Q ss_pred HHHhCCcCCCceEEEe--C----CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh
Q 017382 7 AYKKGSMARDSVAIRA--D----QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE 80 (372)
Q Consensus 7 l~~~a~~~~~~~al~~--~----~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~ 80 (372)
+...+.++|+++|+++ + ++.+||+||.++++++|+.|++. .|+++||+|+++++|+++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~----------------~Gv~~GdrV~i~~~n~~~ 65 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDE----------------LDAEPGSRVALDLPAHWQ 65 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHH----------------hCCCCCCEEEEECCCCHH
Confidence 3566778999999974 2 23699999999999999999971 299999999999999999
Q ss_pred HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCccccc-----CC-C--CCCCCC
Q 017382 81 FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAKFSLI-----PP-V--PNVSSE 152 (372)
Q Consensus 81 ~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-----~~-~--~~~~~~ 152 (372)
++++++|++++|++++|++ .++++++|++++..+.+.. ......+ .. . ......
T Consensus 66 ~~~~~~a~~~~G~v~vp~n-------------~s~a~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 127 (227)
T TIGR03089 66 TAVWLLAAWSTGVEVVLAG-------------DPDADVVVTGPDRLAAAAG-----SGEVVALSLDPLGRRVAGELPPGV 127 (227)
T ss_pred HHHHHHHHHHcCCEEEeCC-------------CCCCCEEEeCcchhhhccc-----CCceEEEeccccccCCCCCCCCcc
Confidence 9999999999999999995 7899999999877665431 1111111 00 0 000000
Q ss_pred cccccccc----ccccc-CCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHH
Q 017382 153 TTVFDQSQ----AEKMD-GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLF 227 (372)
Q Consensus 153 ~~~~~~~~----~~~~~-~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~ 227 (372)
........ ..... ...++|++.|+||||+ +|.++..+. ...+++++|+++ .+|++|+.|+.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~ 193 (227)
T TIGR03089 128 IDFAPEVRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFL 193 (227)
T ss_pred cchhhhhhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHH
Confidence 11111111 01111 3456899999999985 666665554 455788999999 99999999998
Q ss_pred HHHHHHHHcCceEEEcCCCchhHHHHHHHhhCCCCCCCCCccee
Q 017382 228 NALLAPLYAGATVEFMPKFSVRGIWQRWRESYPVNGNRAGEAIT 271 (372)
Q Consensus 228 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t 271 (372)
..++.+++.|+++++.++|++..+++. |++++||
T Consensus 194 ~~~~~~l~~G~t~v~~~rFd~~~~l~~----------i~~~~vT 227 (227)
T TIGR03089 194 ATLLAPLAAGGSLVLVTHPDPARLDQI----------AETERVT 227 (227)
T ss_pred HHHHHHhccCceEEEecCCCHHHHHHH----------HHhhcCC
Confidence 789999999999999999999999999 7788876
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.91 E-value=4.2e-23 Score=192.17 Aligned_cols=169 Identities=20% Similarity=0.261 Sum_probs=138.0
Q ss_pred CCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccC--CCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCC
Q 017382 169 GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYT--SADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 169 ~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~--~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~ 246 (372)
.+..++++|||||||.||+|++||+++...+......+++. +.|++++.+|++|..++...++.++..|+++++.+.+
T Consensus 94 ~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~ 173 (386)
T TIGR02372 94 TPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAA 173 (386)
T ss_pred CCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCC
Confidence 35688999999999999999999999999888877777664 3468999999999999876778889999999999999
Q ss_pred chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHH
Q 017382 247 SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETI 326 (372)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~ 326 (372)
++..+++. ++.+ |+++++|+++..+.+. ..++++++. ++||+++++++++.+.+.
T Consensus 174 ~~~~~l~~----------i~~~--t~~~~~P~~l~~l~~~------------~~~l~slr~-i~gGa~l~~~l~~~~~~~ 228 (386)
T TIGR02372 174 PASGIMRH----------ARPG--DLIVGTPFIWEQLADL------------DYRLPGVVG-VSSGAPSTAATWRCLLAA 228 (386)
T ss_pred ChHHHHHh----------hccC--CEEEECcHHHHHHHhh------------CcCCCccee-EecCCCCCHHHHHHHHHh
Confidence 98888877 4433 8899999999988763 124677886 678999999999999875
Q ss_pred hCC-ccccccccccccccccCCCCCCCCCCcccccCCCceEEE
Q 017382 327 TGH-RLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSM 368 (372)
Q Consensus 327 ~~~-~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~I 368 (372)
+. .+++.||+||++++.+.. .++..|+|+|++++++
T Consensus 229 -g~~~v~~~YG~TEt~~i~~~~-----~~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 229 -GLARLLEVYGATETGGIGLRE-----APDDPFRLLPDLACFA 265 (386)
T ss_pred -cccchhheecccccccccccc-----CCCCCcccCCCccccC
Confidence 64 799999999998655422 1234688999988765
No 123
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.88 E-value=1.4e-21 Score=181.82 Aligned_cols=172 Identities=27% Similarity=0.379 Sum_probs=137.7
Q ss_pred CCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEE---
Q 017382 166 GQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF--- 242 (372)
Q Consensus 166 ~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~--- 242 (372)
...++++++++|||||||.||+|+++|.++..........+ ...++++..+|++|..++. .++.++..|++.++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHH-HHHHHHHcCCeEEecCc
Confidence 34568999999999999999999999999988777655543 3567899999999999985 57788999998887
Q ss_pred cCCCchhHHHHHHHhhCCCCCCCCCcc--eeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHH
Q 017382 243 MPKFSVRGIWQRWRESYPVNGNRAGEA--ITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVM 320 (372)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~i~~~~--~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~ 320 (372)
.+.+++..+++. +++++ .++...+|..+..++.... ...+++++|.+++||+++++++.
T Consensus 108 ~~~~~~~~~~~~----------i~~~~~~~~~~~~~p~~l~~~~~~~~---------~~~~~~~l~~i~~gG~~l~~~~~ 168 (358)
T PRK07824 108 SAGFDPTALPRA----------VAELGGGRRYTSLVPMQLAKALDDPA---------ATAALAELDAVLVGGGPAPAPVL 168 (358)
T ss_pred CCCcCHHHHHHH----------HHHhCCCceEEEecHHHHHHHHhCcc---------ccCCcccceEEEECCCCCCHHHH
Confidence 345788888888 55555 5566778887776655311 12367899999999999999999
Q ss_pred HHHHHHhCCccccccccccccccccCCCCCCCCCCcccccCCCceEEEee
Q 017382 321 QQWETITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQVSMIL 370 (372)
Q Consensus 321 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i~Ivd 370 (372)
+.+.+ ++.++++.||+||++..+. ..|+|++|++++|.|
T Consensus 169 ~~~~~-~~~~v~~~YG~TE~~~~~~----------~~G~~~~g~~v~i~~ 207 (358)
T PRK07824 169 DAAAA-AGINVVRTYGMSETSGGCV----------YDGVPLDGVRVRVED 207 (358)
T ss_pred HHHHh-cCCcEEecccCCccCCCcC----------cCceeCCCCEEEecC
Confidence 98876 4999999999999875332 358999999999854
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.83 E-value=1.6e-19 Score=171.61 Aligned_cols=184 Identities=18% Similarity=0.143 Sum_probs=136.3
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHH---hhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT---EAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~---~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
+.++++.+++||||||.||++.++|.++........ ..+++.++|++++..++.+..+.+...+.++..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 446788999999999999999999999876544332 34578889999887766544333333566788999999888
Q ss_pred CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHH
Q 017382 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWE 324 (372)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~ 324 (372)
..+++.+++. |+++++|+++++|+++..|++.+..... .....++|.+++||+++++++.+.++
T Consensus 153 ~~~~~~~~~~----------i~~~~~t~l~~~Ps~l~~L~~~~~~~~~------~~~~~~lr~i~~~ge~l~~~~~~~i~ 216 (422)
T TIGR02155 153 GGQTEKQVQL----------IQDFKPDIIMVTPSYMLNLLEELKRMGI------DPAQTSLQVGIFGAEPWTNAMRKEIE 216 (422)
T ss_pred CCCHHHHHHH----------HHHHCCCEEEEcHHHHHHHHHHHHHcCC------CcccCceEEEEEeCCcCCHHHHHHHH
Confidence 7778888888 8889999999999999999875321110 11235899999999999999999999
Q ss_pred HHhCCccccccccccccc-cccCCCCCCCCCCcccccC--CCceEEEeec
Q 017382 325 TITGHRLLERYGMTEFVM-AISNPLRGARKAGTVGNPL--PGVQVSMILL 371 (372)
Q Consensus 325 ~~~~~~l~~~YG~tE~~~-~~~~~~~~~~~~~svG~p~--~g~~i~Ivd~ 371 (372)
+.||+++++.||+||+++ ....... . ...|.++ +++.++|+|+
T Consensus 217 ~~~g~~v~~~YG~tE~~~~~~~~~~~-~---~~~g~~~~~~~~~~eivd~ 262 (422)
T TIGR02155 217 ARLGMKATDIYGLSEVIGPGVAMECV-E---TQDGLHIWEDHFYPEIIDP 262 (422)
T ss_pred HHhCCceEecccchhhcCCceeeccc-c---cCCCceEecCeeEEEEECC
Confidence 999999999999999853 2211110 0 1123344 3567778874
No 125
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.80 E-value=3.3e-17 Score=159.84 Aligned_cols=298 Identities=14% Similarity=0.229 Sum_probs=216.9
Q ss_pred HHHHHHHHhCCcCCCceEEEe------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEc
Q 017382 2 EVFKAAYKKGSMARDSVAIRA------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVA 75 (372)
Q Consensus 2 ~~~~~l~~~a~~~~~~~al~~------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~ 75 (372)
++.+.|+..++.+||.+|+.. ...++||.+|..++.+++..|..+ .-++.||.|++++
T Consensus 771 ~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k----------------~~lk~Gd~V~Lmy 834 (1363)
T KOG3628|consen 771 TILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDK----------------GHLKAGDHVVLMY 834 (1363)
T ss_pred HHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhc----------------ccCCCCCeEEEEc
Confidence 688999999999999999985 247999999999999999999986 4789999999999
Q ss_pred CCCHhHHHHHHHHHhhCceeeeCCCCCC------HHHHHHHHhhCCceEEEeccchHHHHHHHHhhcCCc------cccc
Q 017382 76 KPSFEFVAGVLGTWFSGCIAVPLALSYP------ESELLHVMHDSDISMVLSTEDYREVLQNVASKSGAK------FSLI 143 (372)
Q Consensus 76 ~n~~~~~~~~~A~~~~G~~~v~l~~~~~------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~------~~~~ 143 (372)
++++|++++++||+.+|.+++|++|... -..+..+++.+++..|+++......++.-....... +...
T Consensus 835 ~~sie~vaa~~~Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~ 914 (1363)
T KOG3628|consen 835 PPSIEFVAAIYACLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVL 914 (1363)
T ss_pred CChHHHHHHHHHHHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcc
Confidence 9999999999999999999999988543 345778899999999999987655444332211111 1111
Q ss_pred CCCCCC-CCCcc-cccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCch
Q 017382 144 PPVPNV-SSETT-VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLH 221 (372)
Q Consensus 144 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 221 (372)
++.+.. ..... ..+..-..++....++.+|++=+.--++|.--++.+||.++++.+........+.+..-++.+.+.+
T Consensus 915 ~~~~~t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~ 994 (1363)
T KOG3628|consen 915 PKLPETIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPY 994 (1363)
T ss_pred cccchhhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCc
Confidence 111110 00000 0000001112233457889999988899999999999999999999999988888887888888888
Q ss_pred hHHHHHHHHHHHHHcCceEEEcCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHh
Q 017382 222 HVHGLFNALLAPLYAGATVEFMPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAA 297 (372)
Q Consensus 222 ~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~ 297 (372)
-..|+....+...++|...++.++ .++..++.. ++++++.-++.+=..++...+.+...-.+. ..
T Consensus 995 sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~----------i~~~kvkDt~~~~~tln~c~~~l~t~~enl-~~ 1063 (1363)
T KOG3628|consen 995 SGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQI----------ISQYKVKDTYPTYSTLNLCQKGLETSVENL-SK 1063 (1363)
T ss_pred cchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHH----------HhcccccccchhHHHHHHHHhccccccchh-hh
Confidence 777877667777999999888775 467777777 899999999988888887776544322111 11
Q ss_pred hhhhccCceEEEecCCCCCHHHHHHHHHHh
Q 017382 298 SASAAKQLRLMMCGSSALPLPVMQQWETIT 327 (372)
Q Consensus 298 ~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~ 327 (372)
...+.++ ..++..=++....+...|.+.|
T Consensus 1064 ~gnn~s~-s~vv~~~~RPr~ali~sf~klf 1092 (1363)
T KOG3628|consen 1064 RGNNTSS-SIVVPAEERPRIALIASFKKLF 1092 (1363)
T ss_pred hhccccc-ceeeecCCccHHHHHHHHHHHH
Confidence 2233443 4444445555567777777766
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.78 E-value=3.9e-18 Score=162.56 Aligned_cols=180 Identities=19% Similarity=0.135 Sum_probs=133.1
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
+.++++.+.+||||||.||++.+||..+.......... .+++++|+++...|..+..+.....+++...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 34678899999999999999999999988766554443 378899999999998877665444566678888876443
Q ss_pred CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHH
Q 017382 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWE 324 (372)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~ 324 (372)
. ....++. ++++++|.+.++|+.+..+++.+...+. .....++|.+++||+++++++.+.++
T Consensus 164 ~--~~~~~~~----------i~~~~~t~l~~~ps~ll~La~~~~~~g~------~~~~~~lr~ii~gGE~l~~~~r~~ie 225 (445)
T TIGR03335 164 K--CTFPIRI----------IESYRPTGIVASVFKLLRLARRMKAEGI------DPAESSIRRLVVGGESFADESRNYVE 225 (445)
T ss_pred c--hhHHHHH----------HHHhCCCEEEECHHHHHHHHHHHHHcCC------CcccCcceEEEEcCCCCCHHHHHHHH
Confidence 2 2344555 7789999999999998888765322110 11236899999999999999999999
Q ss_pred HHhCCccccccccccccccccCCCCCCCCCCcccccC--CCceEEEeecC
Q 017382 325 TITGHRLLERYGMTEFVMAISNPLRGARKAGTVGNPL--PGVQVSMILLL 372 (372)
Q Consensus 325 ~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~--~g~~i~Ivd~d 372 (372)
+.||+++++.||+||++....+.. ..|..+ +.+.++|+|++
T Consensus 226 ~~~g~~v~~~YG~TE~~~~~~c~~-------~~g~h~~~d~~~vEIvDp~ 268 (445)
T TIGR03335 226 ELWGCEVYNTYGSTEGTMCGECQA-------VAGLHVPEDLVHLDVYDPR 268 (445)
T ss_pred HHhCCcEEecCChhhhhheEEecC-------CCCccccCCceEEEEEcCC
Confidence 999999999999999863221111 124444 34678888864
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.53 E-value=3.6e-14 Score=142.34 Aligned_cols=305 Identities=18% Similarity=0.205 Sum_probs=195.1
Q ss_pred HHHHHHHhCCcCCCceEEEe------C--CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEE
Q 017382 3 VFKAAYKKGSMARDSVAIRA------D--QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIV 74 (372)
Q Consensus 3 ~~~~l~~~a~~~~~~~al~~------~--~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~ 74 (372)
+.+.+.+.+.+.|...+..+ . -..+||.+....++.++..+.+ .|...|+.|+++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~-----------------~~~~~~~~v~i~ 100 (1032)
T KOG1178|consen 38 LEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVS-----------------LGSLRGTTVAIY 100 (1032)
T ss_pred hhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhh-----------------cccccCceEEEe
Confidence 45577788888888888775 1 2689999999999999999999 489999999999
Q ss_pred cCCCHhHHHHHHHHHhhCceeeeCCCCCC----HHHHHHHHhhC-CceEEEeccchHHHHHHHHhhcCCcccccCCCCCC
Q 017382 75 AKPSFEFVAGVLGTWFSGCIAVPLALSYP----ESELLHVMHDS-DISMVLSTEDYREVLQNVASKSGAKFSLIPPVPNV 149 (372)
Q Consensus 75 ~~n~~~~~~~~~A~~~~G~~~v~l~~~~~----~~~l~~~l~~~-~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (372)
+..+.++++..++.+++|..+++++|.++ .+++..+.... ....-+... .+...........+ ..+
T Consensus 101 ~~~~~d~~v~v~~~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~--l~i~~~~~~~~~~~-------~sv 171 (1032)
T KOG1178|consen 101 MLPSVDLVVSVFAVLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRR--LNIIDILLNSLFPK-------LSV 171 (1032)
T ss_pred ccCcCCeeeeeeehhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhh--hhhHHHHhhccccc-------cch
Confidence 99999999999999999999999999998 33222211110 000111110 11111111111000 000
Q ss_pred CCCcccccc----cccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHH
Q 017382 150 SSETTVFDQ----SQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHG 225 (372)
Q Consensus 150 ~~~~~~~~~----~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~ 225 (372)
....+.... ...+......++..+.+.||||+||.||+|..+|..+.+...+....+.....+++-.....+..-.
T Consensus 172 ~~~~~~f~~~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~ 251 (1032)
T KOG1178|consen 172 ETIADSFQMVLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDT 251 (1032)
T ss_pred hhccchhhhhhccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccc
Confidence 000000000 1111222345678999999999999999999999999999999988888888887643444433322
Q ss_pred HHHHHHHHHHcCceEEEcCCCch---hHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHH--hhh-
Q 017382 226 LFNALLAPLYAGATVEFMPKFSV---RGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQA--ASA- 299 (372)
Q Consensus 226 ~~~~~~~~l~~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~--~~~- 299 (372)
.-..+.+.|+.|+.+..+..... ..+... +++++++.++.+|++.+.+.......-..... .-.
T Consensus 252 i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~----------le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~d 321 (1032)
T KOG1178|consen 252 IQKFIGALLFNGNNLLVPTATIKDTPGQLAST----------LERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSD 321 (1032)
T ss_pred hHHHHhhHhhcCceeecccccCccchhhHHHH----------HHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhccc
Confidence 22223444566666666554433 333333 88899999999999988877654431000010 011
Q ss_pred --hhccCceEEEecCCCCCHHHHHHHHHHh--CCccccccccccccccc
Q 017382 300 --SAAKQLRLMMCGSSALPLPVMQQWETIT--GHRLLERYGMTEFVMAI 344 (372)
Q Consensus 300 --~~l~~lr~v~~gG~~~~~~~~~~~~~~~--~~~l~~~YG~tE~~~~~ 344 (372)
...+.|+....+|++...+++..+.+.+ +..... |+.++..+-.
T Consensus 322 l~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~-y~s~~~~~~~ 369 (1032)
T KOG1178|consen 322 LLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLP-YLSTDPTGLV 369 (1032)
T ss_pred ccccchhheeeeecCCccchhhhhhhhhcccceeeeec-ccCCCCccce
Confidence 1234899999999999999888666655 222222 7777765443
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.51 E-value=4.4e-13 Score=122.98 Aligned_cols=159 Identities=20% Similarity=0.154 Sum_probs=123.0
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCch-hHHHHHHHHHHHHHcCceEEEc
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLH-HVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~-~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
+.+++..|-.||||||+|+-+.+++..+......+...+ +...+|++..+.-.. +..|+. .-.++--.|++++-.
T Consensus 88 ~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~-~~~ga~rig~~vip~ 166 (438)
T COG1541 88 PKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLG-LHYGAERIGATVIPI 166 (438)
T ss_pred cccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCch-hHHHHHhhCEEEEcc
Confidence 345666799999999999999999998877666666554 677888876655532 222221 233444577777766
Q ss_pred CCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHH
Q 017382 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQW 323 (372)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~ 323 (372)
..-+.+.-.+. ++++++|++.++|+.+..+++.+...+ ...+-.++|.+++|||++++++.+.+
T Consensus 167 ~~g~~~~~~~l----------~~df~~tvI~~tps~~l~lae~~~~~G------~~~~~~~lk~~i~gaE~~see~R~~i 230 (438)
T COG1541 167 SGGNTERQLEL----------MKDFKPTVIAATPSYLLYLAEEAEEEG------IDPDKLSLKKGIFGAEPWSEEMRKVI 230 (438)
T ss_pred CCccHHHHHHH----------HHhcCCcEEEEChHHHHHHHHHHHHcC------CChhhcceeEEEEecccCCHHHHHHH
Confidence 66677777777 889999999999999999999865432 12244789999999999999999999
Q ss_pred HHHhCCcccccccccccccc
Q 017382 324 ETITGHRLLERYGMTEFVMA 343 (372)
Q Consensus 324 ~~~~~~~l~~~YG~tE~~~~ 343 (372)
.+.||+..++.||+||..+.
T Consensus 231 e~~~g~~~~diYGltE~~g~ 250 (438)
T COG1541 231 ENRFGCKAFDIYGLTEGFGP 250 (438)
T ss_pred HHHhCCceeeccccccccCC
Confidence 99999999999999998655
No 129
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.14 E-value=7.2e-10 Score=104.11 Aligned_cols=147 Identities=10% Similarity=0.050 Sum_probs=97.4
Q ss_pred cEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHHcCce-EEEcC-CC
Q 017382 172 PALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGAT-VEFMP-KF 246 (372)
Q Consensus 172 ~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~-~~~~~-~~ 246 (372)
-..+..||||||+|=.+..+.............. .++..++++...+.-. + .++..+.+... +-..+ ..
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~---~---~ly~~~~~~~~~~~~~~l~~ 174 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRAD---N---NLYQSVNNRWISLDFFDLLA 174 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccC---h---hHHHHHHhccceeeecCCCc
Confidence 4467789999999999999988764433322221 1445555555442110 0 11222222211 12221 13
Q ss_pred chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCCCCHHHHHHHHHH
Q 017382 247 SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSALPLPVMQQWETI 326 (372)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~ 326 (372)
+.+..++. |++++|+++.+.|+.+..|++.... ...+ .+++.++++||+++++..+.+++.
T Consensus 175 ~~~~~l~~----------L~~~~P~~L~g~pS~l~~LA~~~~~--------~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~ 235 (430)
T TIGR02304 175 PFQAHIKR----------LNQRKPSIIVAPPSVLRALALEVME--------GELT-IKPKKVISVAEVLEPQDRELIRNV 235 (430)
T ss_pred CHHHHHHH----------HHHhCCCEEEEcHHHHHHHHHHHHh--------cCCC-CCceEEEEccCCCCHHHHHHHHHH
Confidence 44555565 8889999999999999999886332 1112 468999999999999999999999
Q ss_pred hCCccccccccccccccc
Q 017382 327 TGHRLLERYGMTEFVMAI 344 (372)
Q Consensus 327 ~~~~l~~~YG~tE~~~~~ 344 (372)
||+++++.||+|| |.++
T Consensus 236 fg~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 236 FKNTVHQIYQATE-GFLA 252 (430)
T ss_pred hCCCeeEccCCch-hheE
Confidence 9999999999999 5443
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.11 E-value=6.9e-10 Score=109.61 Aligned_cols=289 Identities=19% Similarity=0.150 Sum_probs=201.3
Q ss_pred HHHHHHhCCcCCCceEEEeC-----CceeeHHHHHHHHHHHHH-HHhhCCCCcccccccccccccccCCCCCEEEEEcCC
Q 017382 4 FKAAYKKGSMARDSVAIRAD-----QKSYSYDQLASSALRISS-LLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP 77 (372)
Q Consensus 4 ~~~l~~~a~~~~~~~al~~~-----~~~~Ty~el~~~~~~la~-~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n 77 (372)
...+++....++...|.+.- ...+||..+..++.+.|+ .|.+ -|..++|+|.+++..
T Consensus 97 ~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~k-----------------sgl~~~~~vvL~Y~~ 159 (1363)
T KOG3628|consen 97 IAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNK-----------------SGLKPGDRVVLYYRK 159 (1363)
T ss_pred HHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhc-----------------cCCCCCcEEEEEEEh
Confidence 34455555777778888752 258999999999999999 5555 599999999999998
Q ss_pred C--HhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHhhcC-CcccccCCCCCCCCCcc
Q 017382 78 S--FEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVASKSG-AKFSLIPPVPNVSSETT 154 (372)
Q Consensus 78 ~--~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 154 (372)
+ .|+++..++|...|..++|+.+..+-+++..+++....+++++..+..+.+........ .+.+.......+.
T Consensus 160 ~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~t~~~k---- 235 (1363)
T KOG3628|consen 160 CEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWKTNDFK---- 235 (1363)
T ss_pred hhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhhccccc----
Confidence 8 99999999999999999999999999999999999999999999876655443321100 0100000000000
Q ss_pred cccccccccccCCCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHH--------------------hhcccCCCCeE
Q 017382 155 VFDQSQAEKMDGQRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLT--------------------EAWEYTSADQF 214 (372)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~--------------------~~~~~~~~d~~ 214 (372)
.....+....+...-. ..+|-||++++|+--|++.+|. ++.+.+... ..++....+.+
T Consensus 236 ~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~ 313 (1363)
T KOG3628|consen 236 GNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVL 313 (1363)
T ss_pred ceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccce
Confidence 0000011111111122 7899999999999999999998 554443322 22244667888
Q ss_pred EEecCchhHHHHHHHHHHHHHcCceEEEcCC---CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhcc
Q 017382 215 LHCLPLHHVHGLFNALLAPLYAGATVEFMPK---FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMD 291 (372)
Q Consensus 215 l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~ 291 (372)
+.........|++++++.++++|.|.+..|+ ..|..+... +.+++.+++..--..++.....+...+
T Consensus 314 l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l----------~~k~R~~~~ltd~~~Lkq~~~ny~~~p 383 (1363)
T KOG3628|consen 314 LTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANL----------ITKYRATWSLTDYAGLKQPVYNYQEDP 383 (1363)
T ss_pred eeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhh----------hccceeEEEeecccccCcccccccCCc
Confidence 8888888889999999999999999999987 455544444 788999988776555555444332211
Q ss_pred HH---HHHhhhhhccCceEEEecCCCCCHHHHHHHHH
Q 017382 292 TE---LQAASASAAKQLRLMMCGSSALPLPVMQQWET 325 (372)
Q Consensus 292 ~~---~~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~ 325 (372)
.+ ....+..+++++|.+++.-..+..+.......
T Consensus 384 ~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~ 420 (1363)
T KOG3628|consen 384 KATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSD 420 (1363)
T ss_pred ccccchhhccCCCccceeeeEEeeeecchHHHHHHHH
Confidence 11 12233468999999999988888765544433
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.15 E-value=0.00014 Score=67.24 Aligned_cols=166 Identities=16% Similarity=0.233 Sum_probs=94.6
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh---c-ccCCC-CeEEEecCchhHHH----HHHHHHHHHHcCc
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---W-EYTSA-DQFLHCLPLHHVHG----LFNALLAPLYAGA 238 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~-~~~~~-d~~l~~~pl~~~~~----~~~~~~~~l~~G~ 238 (372)
..+++..++.||||||.|--+.+.+..+..+....... + ..... -.++...|-..... ........+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 34677889999999999866666666555554333322 2 22222 23333334332111 1112222344555
Q ss_pred eEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhcc-CceEEEecC----
Q 017382 239 TVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAK-QLRLMMCGS---- 312 (372)
Q Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~-~lr~v~~gG---- 312 (372)
...+-. .++.+...+.+.+. ..+.++..+++.|.++-.+++.+++.+. ...++ ..+.+-.||
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~------~~~~~pv~l~Gftf~~~~~~~~l~~~~~------~~~L~~~s~vi~~GGwK~~ 234 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRA------EHSGEPVLLFGFTFFIWFLLDELEERGI------RFRLPKGSIVIHGGGWKGR 234 (365)
T ss_pred eeeecCCccCHHHHHHHHHHH------HhCCCCEEEECchHHHHHHHHHHHhcCC------cccCCCCCEEEeCCCCCcc
Confidence 533322 35677666665432 3567788999999887777665543221 12333 345555554
Q ss_pred --CCCCH-HHHHHHHHHhCC----cccccccccccccccc
Q 017382 313 --SALPL-PVMQQWETITGH----RLLERYGMTEFVMAIS 345 (372)
Q Consensus 313 --~~~~~-~~~~~~~~~~~~----~l~~~YG~tE~~~~~~ 345 (372)
+.++. +..+.+.+.||+ .+++.|||||.....+
T Consensus 235 ~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~ 274 (365)
T PF04443_consen 235 RKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAY 274 (365)
T ss_pred ccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhhe
Confidence 45654 666666778887 7899999999765443
No 132
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.46 E-value=0.16 Score=47.74 Aligned_cols=92 Identities=16% Similarity=0.131 Sum_probs=74.9
Q ss_pred eeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC--HhHHHHHHHHHhhCceeeeCCCCCC
Q 017382 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSYP 103 (372)
Q Consensus 26 ~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~--~~~~~~~~A~~~~G~~~v~l~~~~~ 103 (372)
-+|+.+....+..+|+.|.. +|..+||+|..+..-+ ..-+-..+|+.++|+.++|+.+..
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~-----------------~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~- 170 (438)
T COG1541 109 GYTAKDIERWAELLARSLYS-----------------AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN- 170 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHH-----------------ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-
Confidence 59999999999999999999 5999999999887732 122678889999999999998854
Q ss_pred HHHHHHHHhhCCceEEEeccchHHHHHHHHhh
Q 017382 104 ESELLHVMHDSDISMVLSTEDYREVLQNVASK 135 (372)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~ 135 (372)
-+.-..++++.++.++.+.+.+...+.+....
T Consensus 171 ~~~~~~l~~df~~tvI~~tps~~l~lae~~~~ 202 (438)
T COG1541 171 TERQLELMKDFKPTVIAATPSYLLYLAEEAEE 202 (438)
T ss_pred HHHHHHHHHhcCCcEEEEChHHHHHHHHHHHH
Confidence 34456789999999999999877665555443
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=94.02 E-value=0.15 Score=50.03 Aligned_cols=32 Identities=28% Similarity=0.258 Sum_probs=25.8
Q ss_pred CCCCCCcEEEEecCCCCCC-CceeeeehhhHHH
Q 017382 166 GQRGEDPALIVYTSGTTGK-PKGVVHTHKSIDA 197 (372)
Q Consensus 166 ~~~~~~~a~i~~TSGtTG~-pK~v~~s~~~l~~ 197 (372)
...++.+.+...||||||. ||-+.+|...+..
T Consensus 76 vL~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 76 VLTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp CTSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 3456778999999999999 9999999988755
No 134
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=91.87 E-value=8.7 Score=38.19 Aligned_cols=43 Identities=12% Similarity=0.087 Sum_probs=30.4
Q ss_pred hhccCceEEEecCCCCCHHHHHHHHHHh-CCcccc-ccccccccc
Q 017382 300 SAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLE-RYGMTEFVM 342 (372)
Q Consensus 300 ~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~l~~-~YG~tE~~~ 342 (372)
...+++++|.+--..-..+....++..+ |.+++. .||+||+-+
T Consensus 290 rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ 334 (606)
T PLN02247 290 RLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYF 334 (606)
T ss_pred HhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEE
Confidence 4568889888865555666667776555 566665 999999653
No 135
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=90.67 E-value=9.2 Score=38.01 Aligned_cols=44 Identities=9% Similarity=0.039 Sum_probs=30.8
Q ss_pred hhhccCceEEEecCCCCCHHHHHHHHHHh-CCcccc-ccccccccc
Q 017382 299 ASAAKQLRLMMCGSSALPLPVMQQWETIT-GHRLLE-RYGMTEFVM 342 (372)
Q Consensus 299 ~~~l~~lr~v~~gG~~~~~~~~~~~~~~~-~~~l~~-~YG~tE~~~ 342 (372)
....+++++|.+-...-..+....++..+ |.+++. .|++||+-+
T Consensus 300 ~rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ 345 (612)
T PLN02620 300 TRLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYF 345 (612)
T ss_pred HHhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEE
Confidence 34568899888766555666666666555 666665 999999653
No 136
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=85.59 E-value=8.2 Score=37.06 Aligned_cols=83 Identities=12% Similarity=0.027 Sum_probs=61.8
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh--HHHHHHHHHhhCceeeeCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSY 102 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~--~~~~~~A~~~~G~~~v~l~~~~ 102 (372)
..+|.+++...+...+..+.. +|+++||++.+..+.+.. .....+++..+|+.++|...
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~-----------------~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~-- 164 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVS-----------------QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK-- 164 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHH-----------------cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc--
Confidence 358999998888888888877 499999999998876643 23445778899998887653
Q ss_pred CHHHHHHHHhhCCceEEEeccchHH
Q 017382 103 PESELLHVMHDSDISMVLSTEDYRE 127 (372)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (372)
......++++.++..++......-
T Consensus 165 -~~~~~~~i~~~~~t~l~~~ps~ll 188 (445)
T TIGR03335 165 -CTFPIRIIESYRPTGIVASVFKLL 188 (445)
T ss_pred -hhHHHHHHHHhCCCEEEECHHHHH
Confidence 233466788899999887665433
No 137
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=85.37 E-value=7.5 Score=36.92 Aligned_cols=88 Identities=15% Similarity=0.214 Sum_probs=64.7
Q ss_pred eeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH--hHHHHHHHHHhhCceeeeCCCCCC
Q 017382 26 SYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPLALSYP 103 (372)
Q Consensus 26 ~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~--~~~~~~~A~~~~G~~~v~l~~~~~ 103 (372)
.+|..++......++..+.. +|+++||++......+. ......++....|+.+++++...
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~-----------------~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 155 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRA-----------------AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ- 155 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHH-----------------cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-
Confidence 46777777666667777766 48999999887665442 22234567888999999987764
Q ss_pred HHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
.+.+...|++.++.+++..+.....+.+
T Consensus 156 ~~~~~~~i~~~~~t~l~~~Ps~l~~L~~ 183 (422)
T TIGR02155 156 TEKQVQLIQDFKPDIIMVTPSYMLNLLE 183 (422)
T ss_pred HHHHHHHHHHHCCCEEEEcHHHHHHHHH
Confidence 4667889999999999998877655443
No 138
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=78.87 E-value=22 Score=34.37 Aligned_cols=86 Identities=19% Similarity=0.205 Sum_probs=63.6
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh--HHHHHHHHHhhCceeeeCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSY 102 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~--~~~~~~A~~~~G~~~v~l~~~~ 102 (372)
..+|+..+...+..+... ++++++|++...++.... +...+++++..|+.+++. +..
T Consensus 184 v~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~ 242 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY--------------------LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVF 242 (513)
T ss_pred EEEecHHHHHHHHHHHHh--------------------hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcC
Confidence 468999887655544333 378889999888776533 344578888999988876 456
Q ss_pred CHHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
+++.+...+++.++.++...+.....+..
T Consensus 243 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 271 (513)
T PRK07656 243 DPDEVFRLIETERITVLPGPPTMYNSLLQ 271 (513)
T ss_pred CHHHHHHHHHHhCCeEEechHHHHHHHHc
Confidence 78889999999999999988876665543
No 139
>PLN02736 long-chain acyl-CoA synthetase
Probab=77.83 E-value=65 Score=32.62 Aligned_cols=105 Identities=10% Similarity=-0.097 Sum_probs=71.3
Q ss_pred CCCCCcEEEEe--cCCCCCCCceeeeehhhHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEE
Q 017382 167 QRGEDPALIVY--TSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVE 241 (372)
Q Consensus 167 ~~~~~~a~i~~--TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~ 241 (372)
..++.+++..- ..|.+|. -..+|...+...+..+... .++.++|++...++-+--... .+++++..|+..+
T Consensus 56 ~~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~--~~lA~~~~G~v~v 131 (651)
T PLN02736 56 TFRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLI--VDHACSAYSYVSV 131 (651)
T ss_pred hCCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCeEE
Confidence 34566765432 1232221 2347999888777666554 478899999888887655443 4678888998888
Q ss_pred EcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHH
Q 017382 242 FMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQ 285 (372)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 285 (372)
... .++++.+... ++..++.+++..+..+..+.+
T Consensus 132 pl~~~~~~~~l~~i----------l~~~~~~~l~~~~~~~~~~~~ 166 (651)
T PLN02736 132 PLYDTLGPDAVKFI----------VNHAEVAAIFCVPQTLNTLLS 166 (651)
T ss_pred EeecCCCHHHHHHH----------HhccCCCEEEECHHHHHHHHH
Confidence 665 4666666666 788899999998877665543
No 140
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=77.74 E-value=16 Score=32.83 Aligned_cols=58 Identities=10% Similarity=-0.028 Sum_probs=43.2
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEecc
Q 017382 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 65 v~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (372)
+++|+ ..+=...+---+..-+.+...|..++.+=|..-..+-+.+|+..++.+++++.
T Consensus 59 l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 88888 44555556666777777778888776655544445568899999999999996
No 141
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=76.03 E-value=17 Score=34.04 Aligned_cols=88 Identities=23% Similarity=0.127 Sum_probs=63.4
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.|+.+|++. -....+|+..+...+..+...+ +++.+|++....+-+..+ +..+++++..|+..+..+
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~--~~~~~A~~~~G~~~v~l~ 77 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEF--VVAFLACLRAGAIPVPLD 77 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHH--HHHHHHHHHTT-EEEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcccee--eeeecccccccccccccc
Confidence 567888877 2235789999887777766544 678899988888876443 335788899999998886
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeec
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTG 275 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 275 (372)
. .+.+.+... +++.++++++.
T Consensus 78 ~~~~~~~~~~~----------l~~~~~~~ii~ 99 (417)
T PF00501_consen 78 PSLSEDELRHI----------LRQSGPKVIIT 99 (417)
T ss_dssp TTSSHHHHHHH----------HHHHTESEEEE
T ss_pred ccccccccccc----------ccccceeEEEE
Confidence 5 556666555 67788998885
No 142
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=75.78 E-value=38 Score=33.30 Aligned_cols=98 Identities=11% Similarity=0.092 Sum_probs=67.5
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH--hHH
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFV 82 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~--~~~ 82 (372)
.++.+|++. .+..+|++.+...+...... .++..+|++...+|-.. -+.
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~p~~h~~g~~ 240 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKF--------------------FSPKEDDVMMSFLPPFHAYGFN 240 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh--------------------cCCCCCceEEEecchHhhhhhH
Confidence 457777764 13468998887654443322 36778999888877432 222
Q ss_pred HHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 83 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
...+..+..|+..+.......++.+...+++.++.++...+.....+.+
T Consensus 241 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 241 SCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred HHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 3356677788887766555678889999999999999998877665543
No 143
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=75.43 E-value=27 Score=33.87 Aligned_cols=86 Identities=10% Similarity=0.031 Sum_probs=64.0
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH-HHHHHHHHhhCceeeeCCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF-VAGVLGTWFSGCIAVPLALSYP 103 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~-~~~~~A~~~~G~~~v~l~~~~~ 103 (372)
..+|++.+...+...... .+++++|++....+....+ ....++++..|+.++..+.. +
T Consensus 185 v~~t~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~ 243 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCAW--------------------LKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-D 243 (521)
T ss_pred EEeehHHHHHHHHHHHHh--------------------hCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-C
Confidence 368898888766665552 3889999999888765433 33345578889888877665 8
Q ss_pred HHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
++.+...+++.++.++++.+.....+..
T Consensus 244 ~~~~~~~l~~~~~t~l~~~p~~~~~l~~ 271 (521)
T PRK06187 244 PENLLDLIETERVTFFFAVPTIWQMLLK 271 (521)
T ss_pred HHHHHHHHHHhCCeEEEchHHHHHHHHc
Confidence 8899999999999999998876665543
No 144
>PRK09274 peptide synthase; Provisional
Probab=73.18 E-value=30 Score=34.01 Aligned_cols=98 Identities=17% Similarity=0.138 Sum_probs=64.2
Q ss_pred CCCCcEEEEecCCCC-CCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 168 RGEDPALIVYTSGTT-GKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 168 ~~~~~a~i~~TSGtT-G~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
.++.++++....+++ ...+...+|...+...+..+...+ +++.+|++...++-+...-. .+++++..|+..+..
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~--~~la~~~~G~~~v~l 96 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFA--LTFALFKAGAVPVLV 96 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHH--HHHHHHHcCeEEEEc
Confidence 456666655333221 223334689999887777666544 68899999998886655433 478889999998887
Q ss_pred CC-CchhHHHHHHHhhCCCCCCCCCcceeEeecch
Q 017382 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (372)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 277 (372)
+. ...+.+... +++.++..++..+
T Consensus 97 ~~~~~~~~l~~~----------l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQC----------LAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHH----------HHhcCCCEEEecc
Confidence 65 455555554 5566777666544
No 145
>PLN03052 acetate--CoA ligase; Provisional
Probab=71.04 E-value=46 Score=34.29 Aligned_cols=99 Identities=19% Similarity=0.190 Sum_probs=69.7
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc-
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM- 243 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~- 243 (372)
.++.+|++.-..+..|.+ ...+|...|...+..+...+ +++++|++...+|.+--.-. .+++++..|+..+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~vi--a~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVI--IYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHH--HHHHHHHcCCEEEeeC
Confidence 467788765443322222 24689999887777766544 78899999999998655433 478888888887766
Q ss_pred CCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHH
Q 017382 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (372)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~ 279 (372)
+.+.++.+... ++..++.+++.....
T Consensus 265 p~~~~~~l~~r----------l~~~~~k~lit~d~~ 290 (728)
T PLN03052 265 DSFAPSEIATR----------LKISKAKAIFTQDVI 290 (728)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEEcCcc
Confidence 45788888877 666788887776543
No 146
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=70.90 E-value=57 Score=31.44 Aligned_cols=97 Identities=18% Similarity=0.145 Sum_probs=72.5
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCC--CHhHH
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKP--SFEFV 82 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n--~~~~~ 82 (372)
.||..+-+. .+-++|-.++.+.+...+..+ |....+++++-.|- +.-++
T Consensus 232 ~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~--------------------g~~e~~~i~~~~Pl~H~~G~~ 291 (596)
T KOG1177|consen 232 SPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA--------------------GYNEKHRICIPNPLYHCFGCV 291 (596)
T ss_pred CCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh--------------------CcCcceEEEecCchHHHHHHH
Confidence 467666653 246899999999988877766 66665555544332 23346
Q ss_pred HHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHH
Q 017382 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (372)
Q Consensus 83 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (372)
+..+|++..|+..|.-.|.+.+..+-..+.+-++..++..+.....+.
T Consensus 292 ~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dll 339 (596)
T KOG1177|consen 292 LGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLL 339 (596)
T ss_pred HHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHh
Confidence 677888899999999889999988888999999999999987655443
No 147
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=70.57 E-value=29 Score=29.85 Aligned_cols=52 Identities=15% Similarity=0.014 Sum_probs=42.3
Q ss_pred ccCCCCCEEEEEcCCCHhH--HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCc
Q 017382 63 LAGGCGARIGIVAKPSFEF--VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDI 116 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~--~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 116 (372)
+|+.++|++. .+|-..-+ ...+++.+..|+..+.. +.++++.+-..+++.++
T Consensus 173 ~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 173 AGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred cCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 4889999999 98877533 34689999999998888 58889998888887765
No 148
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=70.40 E-value=3.8 Score=25.13 Aligned_cols=26 Identities=23% Similarity=0.280 Sum_probs=22.6
Q ss_pred eEEEecCCCCCHHHHHHHHHHhCCcc
Q 017382 306 RLMMCGSSALPLPVMQQWETITGHRL 331 (372)
Q Consensus 306 r~v~~gG~~~~~~~~~~~~~~~~~~l 331 (372)
+++-++|.|++.++-..++..||-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 67889999999999999998887654
No 149
>PRK07529 AMP-binding domain protein; Validated
Probab=69.29 E-value=35 Score=34.37 Aligned_cols=98 Identities=15% Similarity=0.083 Sum_probs=66.6
Q ss_pred CCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 167 ~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
..++.+|++....+.. ..+...+|...+...+..+...+ +++++|++...+|-+.-.-. .+++++..|..+-+.
T Consensus 37 ~~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~--~~lA~~~~Gi~~pi~ 113 (632)
T PRK07529 37 RHPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHF--ALWGGEAAGIANPIN 113 (632)
T ss_pred HCCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCEEEeCC
Confidence 3567788776543321 12356789999887776665544 78899999999987655433 477778888654444
Q ss_pred CCCchhHHHHHHHhhCCCCCCCCCcceeEeecch
Q 017382 244 PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (372)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 277 (372)
+..+++.+... +++.++..++...
T Consensus 114 ~~~~~~~i~~~----------l~~~~~~~li~~~ 137 (632)
T PRK07529 114 PLLEPEQIAEL----------LRAAGAKVLVTLG 137 (632)
T ss_pred CcCCHHHHHHH----------HHhcCCcEEEEeC
Confidence 56677777776 6677888877753
No 150
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=68.86 E-value=52 Score=32.57 Aligned_cols=69 Identities=13% Similarity=0.212 Sum_probs=52.5
Q ss_pred ccCCCCCEEEEEcCCCHh--HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 63 LAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~--~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
++++++|++....+.... ....+++.+..|+..+.......++.+...+++.++.++...+...+.+..
T Consensus 241 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 311 (570)
T PRK04319 241 LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMG 311 (570)
T ss_pred cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 377889987766655432 234577888899988877767788999999999999999998877766543
No 151
>PRK08315 AMP-binding domain protein; Validated
Probab=68.39 E-value=42 Score=33.02 Aligned_cols=83 Identities=12% Similarity=0.081 Sum_probs=60.2
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC--HhHHHHHHHHHhhCceeeeCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~--~~~~~~~~A~~~~G~~~v~l~~~~ 102 (372)
..+|++.+...+..+... ++++++|++....+-. .-++..+++.+..|+..+......
T Consensus 217 v~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 276 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA--------------------MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGF 276 (559)
T ss_pred EEeeHHHHHHHHHHHHHh--------------------cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCC
Confidence 468888886555544333 3788999998877753 334455678888898887555566
Q ss_pred CHHHHHHHHhhCCceEEEeccchHH
Q 017382 103 PESELLHVMHDSDISMVLSTEDYRE 127 (372)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (372)
++..+...+++.++.+++..+....
T Consensus 277 ~~~~~~~~l~~~~~t~~~~~P~~~~ 301 (559)
T PRK08315 277 DPLATLAAVEEERCTALYGVPTMFI 301 (559)
T ss_pred CHHHHHHHHHHcCCeEEecchHHHH
Confidence 7888889999999999988776543
No 152
>PLN03051 acyl-activating enzyme; Provisional
Probab=67.66 E-value=45 Score=32.36 Aligned_cols=68 Identities=4% Similarity=-0.036 Sum_probs=50.3
Q ss_pred ccCCCCCEEEEEcCCCHh-HHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHH
Q 017382 63 LAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~-~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (372)
.++.++|++...+|-... ....+++.+..|+.++..+.....+.+...+++.++.++..-+.....+.
T Consensus 155 ~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~ 223 (499)
T PLN03051 155 MDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWR 223 (499)
T ss_pred cCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHH
Confidence 377889988776665432 12356778889998887765456677889999999999999887766553
No 153
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=66.57 E-value=54 Score=31.71 Aligned_cols=86 Identities=15% Similarity=0.164 Sum_probs=64.4
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh-HHHHHHHHHhhCceeeeCCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALSYP 103 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~-~~~~~~A~~~~G~~~v~l~~~~~ 103 (372)
..+|+..+...+......+ +++.||++...++-... .+...++++..|+..+..+ ...
T Consensus 179 v~~t~~~l~~~~~~~~~~~--------------------~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~ 237 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL--------------------ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLL 237 (515)
T ss_pred EEEecHHHHHHHHHHHHHh--------------------CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCC
Confidence 4688888877666555433 66789999988886643 3445678888999888664 457
Q ss_pred HHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
++.+...+++.++.++...+.....+..
T Consensus 238 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 265 (515)
T TIGR03098 238 PRDVLKALEKHGITGLAAVPPLWAQLAQ 265 (515)
T ss_pred HHHHHHHHHHcCCceEecChHHHHHHHh
Confidence 8889999999999999998877665543
No 154
>PLN02654 acetate-CoA ligase
Probab=66.09 E-value=65 Score=32.77 Aligned_cols=97 Identities=19% Similarity=0.132 Sum_probs=68.1
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|++..... .| ....+|...|...+..+...+ +++++|++...+|..--.-. .+++++..|+..+...
T Consensus 102 ~~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~--a~lA~~~~Gav~vpv~ 176 (666)
T PLN02654 102 NGDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPI--AMLACARIGAVHSVVF 176 (666)
T ss_pred CCCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEecC
Confidence 4577776642221 11 235689999988777766544 78899999999988655433 5788899998887764
Q ss_pred -CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHH
Q 017382 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM 279 (372)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~ 279 (372)
.+.++.+... ++..++.++++....
T Consensus 177 ~~~~~~~l~~~----------l~~~~~~~li~~~~~ 202 (666)
T PLN02654 177 AGFSAESLAQR----------IVDCKPKVVITCNAV 202 (666)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEEcCcc
Confidence 5777777777 667788888776543
No 155
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=66.07 E-value=64 Score=32.38 Aligned_cols=97 Identities=16% Similarity=0.155 Sum_probs=68.3
Q ss_pred CCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 167 ~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
..++.+|++.... .+| ....+|...+...+..+...+ +++++|++...+|-+--.-. .+++++..|+..+..
T Consensus 69 ~~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 69 ARPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAI--AMLACARIGAIHSVV 143 (625)
T ss_pred cCCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCCEEecc
Confidence 3567788775332 122 245689999887777666544 78899999999987655433 578889999888776
Q ss_pred C-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchH
Q 017382 244 P-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (372)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 278 (372)
. .+.++.+... ++..++.+++....
T Consensus 144 ~~~~~~~~l~~~----------l~~~~~~~li~~~~ 169 (625)
T TIGR02188 144 FGGFSAEALADR----------INDAGAKLVITADE 169 (625)
T ss_pred CCCCCHHHHHHH----------HHhcCCCEEEEcCc
Confidence 4 5677777777 67778888777654
No 156
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=65.84 E-value=64 Score=32.69 Aligned_cols=94 Identities=17% Similarity=0.090 Sum_probs=67.1
Q ss_pred CCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC-
Q 017382 169 GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP- 244 (372)
Q Consensus 169 ~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~- 244 (372)
++.+|++.-..+. + ....+|.+.+...+..+...+ +++++|++...+|..--.-. .+++++..|+..+...
T Consensus 75 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~--~~lA~~~~Gav~vpl~~ 149 (647)
T PTZ00237 75 RDQDALIYECPYL-K--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLI--AMLSCARIGATHCVLFD 149 (647)
T ss_pred CCceEEEEEcCCC-C--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeCC
Confidence 5667765532211 1 235689999987777766544 78999999999998766544 4788888888876664
Q ss_pred CCchhHHHHHHHhhCCCCCCCCCcceeEeecch
Q 017382 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (372)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 277 (372)
.+.++.+... ++..++.+++...
T Consensus 150 ~~~~~~l~~~----------l~~~~~~~li~~~ 172 (647)
T PTZ00237 150 GYSVKSLIDR----------IETITPKLIITTN 172 (647)
T ss_pred CCCHHHHHHH----------HHhcCCCEEEEcc
Confidence 5788888777 6777888887754
No 157
>PRK06164 acyl-CoA synthetase; Validated
Probab=65.74 E-value=77 Score=31.01 Aligned_cols=96 Identities=11% Similarity=0.028 Sum_probs=67.9
Q ss_pred CCceEEEe--C-------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh-HHHH
Q 017382 15 RDSVAIRA--D-------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE-FVAG 84 (372)
Q Consensus 15 ~~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~-~~~~ 84 (372)
++.++++. . +..+|...+...+..++..+ ++.++|++...+|.+.. .+..
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~--------------------~~~~~~~~l~~~p~~~~~g~~~ 239 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY--------------------GYDPGAVLLAALPFCGVFGFST 239 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc--------------------CCCCCCEEEEcCCchhHHHHHH
Confidence 45666664 1 24688888876666555444 67789999988886532 2345
Q ss_pred HHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 85 VLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 85 ~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
+++.+..|+..+..+ ......+...+++.++.+++..+.....+..
T Consensus 240 ~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 240 LLGALAGGAPLVCEP-VFDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred HHHHHhcCceEEecC-CCCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 677777888777664 5677888999999999999988876665443
No 158
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=65.58 E-value=85 Score=29.15 Aligned_cols=98 Identities=15% Similarity=0.128 Sum_probs=70.4
Q ss_pred CCceEEEe--C-------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh-HHHH
Q 017382 15 RDSVAIRA--D-------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE-FVAG 84 (372)
Q Consensus 15 ~~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~-~~~~ 84 (372)
++.++++. . ...+|+..+...+..+... .+++++|++....+.... .+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~p~~~~~~~~~ 178 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLARR--------------------YGLDPDDRVLQFASLSFDASVEE 178 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHHh--------------------cCCCCCceEEEecCCccchhHHH
Confidence 46666663 1 2467888887766666552 367789999888776644 4455
Q ss_pred HHHHHhhCceeeeCCCCCC--HHHHHHHHhhCCceEEEeccchHHHHHHH
Q 017382 85 VLGTWFSGCIAVPLALSYP--ESELLHVMHDSDISMVLSTEDYREVLQNV 132 (372)
Q Consensus 85 ~~A~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (372)
++..+..|+..+..+.... +..+..++++.++..++..+...+.+.+.
T Consensus 179 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 179 IFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred HHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 6777888887777665544 67889999999999999998877766554
No 159
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=65.17 E-value=67 Score=32.35 Aligned_cols=97 Identities=18% Similarity=0.169 Sum_probs=68.4
Q ss_pred CCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 167 ~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
..++.+|++..... ......+|++.+...+..+...+ ++..+|++...+|-+--.-. .+++++..|+..+..
T Consensus 79 ~~p~~~Al~~~~~~---~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~l 153 (637)
T PRK00174 79 TRGDKVAIIWEGDD---PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAV--AMLACARIGAVHSVV 153 (637)
T ss_pred cCCCCeEEEEECCC---CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEec
Confidence 35778887753211 11345789999988777776544 78899999998887655544 478889999988877
Q ss_pred C-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchH
Q 017382 244 P-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (372)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 278 (372)
. .+.++.+... ++..++..++....
T Consensus 154 ~~~~~~~~l~~~----------l~~~~~~~li~~~~ 179 (637)
T PRK00174 154 FGGFSAEALADR----------IIDAGAKLVITADE 179 (637)
T ss_pred CCCCCHHHHHHH----------HHhcCCcEEEEcCc
Confidence 5 4666776666 66778887776554
No 160
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=63.81 E-value=89 Score=31.42 Aligned_cols=100 Identities=15% Similarity=0.103 Sum_probs=71.3
Q ss_pred CcCCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHH
Q 017382 12 SMARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV 82 (372)
Q Consensus 12 ~~~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~ 82 (372)
...||.+|.+. -|.-+||+.+...+..+...+. -++++|++.-++|-..-+-
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~-------------------~~~~~d~~LsfLPlaHi~E 247 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP-------------------PIGPGDRVLSFLPLAHIFE 247 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC-------------------CCCCCcEEEEeCcHHHHHH
Confidence 45688888774 1457999999999888877762 1788999999999764333
Q ss_pred HHH-HHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHH
Q 017382 83 AGV-LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNV 132 (372)
Q Consensus 83 ~~~-~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (372)
-++ .++...|.+.+... .+...+...++..+|.+++.-+...+.+...
T Consensus 248 r~~~~~~~~~~g~~~~~~--~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~ 296 (613)
T COG1022 248 RAFEGGLALYGGVTVLFK--EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKG 296 (613)
T ss_pred HHHHHHHHhhcceEEEec--CCHHHHHHHHHHhCCeEEeechHHHHHHHHH
Confidence 333 44444454444443 3467789999999999999998877665543
No 161
>PRK12583 acyl-CoA synthetase; Provisional
Probab=62.78 E-value=69 Score=31.43 Aligned_cols=82 Identities=12% Similarity=0.104 Sum_probs=58.5
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC--HhHHHHHHHHHhhCceeeeCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~--~~~~~~~~A~~~~G~~~v~l~~~~ 102 (372)
..+|+..+...+..+... .+++++|++....+-. .-.+...++.+..|+.++......
T Consensus 219 v~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~ 278 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES--------------------LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAF 278 (558)
T ss_pred EEeeHHHHHHHHHHHHHH--------------------hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCC
Confidence 468888886555544333 3778899988777643 344556677888888877444456
Q ss_pred CHHHHHHHHhhCCceEEEeccchH
Q 017382 103 PESELLHVMHDSDISMVLSTEDYR 126 (372)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~ 126 (372)
.+..+...+++.++.+++..+...
T Consensus 279 ~~~~~~~~i~~~~~t~l~~~P~~~ 302 (558)
T PRK12583 279 DPLATLQAVEEERCTALYGVPTMF 302 (558)
T ss_pred CHHHHHHHHHHcCCeEEeccHHHH
Confidence 778888899999999998877654
No 162
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=62.72 E-value=74 Score=31.44 Aligned_cols=88 Identities=15% Similarity=0.089 Sum_probs=70.6
Q ss_pred eeeeehhhHHHHHHHHHhhcc-----cCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCC
Q 017382 187 GVVHTHKSIDAQVQMLTEAWE-----YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYP 260 (372)
Q Consensus 187 ~v~~s~~~l~~~~~~~~~~~~-----~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~ 260 (372)
+..+|+..+...+...+..+. ++.+|++....|-+.-+... +++++..|+.+.-... ++...+...
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~--~la~~~~Ga~~~~~Np~~~~~ei~~~------ 114 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVEL--ALAVPMAGAVLNPLNPRLTASEIAKQ------ 114 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHH--HHHHHHcCccccccCcccCHHHHHHH------
Confidence 788999999888887776653 67899999999998776663 6788899988887764 667777666
Q ss_pred CCCCCCCcceeEeecchHHHHHHHHh
Q 017382 261 VNGNRAGEAITAFTGVPTMYTRLIQG 286 (372)
Q Consensus 261 ~~~~i~~~~~t~~~~~p~~~~~l~~~ 286 (372)
++..++.+++.....+..+.+.
T Consensus 115 ----~~~s~~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 115 ----LKDSKPKLIFVDEDFYDKISEA 136 (537)
T ss_pred ----HHhcCCeEEEEcCchHHHHHHH
Confidence 6778999999999988887654
No 163
>PLN03102 acyl-activating enzyme; Provisional
Probab=62.53 E-value=91 Score=30.98 Aligned_cols=94 Identities=12% Similarity=0.008 Sum_probs=66.1
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|.+. .+ -.+|...+...+..+...+ ++..+|++...+|-.-.. +..+++++..|+.++..+
T Consensus 27 ~p~~~Al~~--~~-------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~--~~~~la~~~~G~~~vpl~ 95 (579)
T PLN03102 27 YPNRTSIIY--GK-------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAM--YEMHFAVPMAGAVLNPIN 95 (579)
T ss_pred CCCCeEEEE--CC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH--HHHHHHHHhcCcEEeecc
Confidence 466777654 11 2589999887777766544 788999999888865443 335788899999888776
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHH
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 282 (372)
. .+++.+... ++..+++.++..+.....
T Consensus 96 ~~~~~~~l~~~----------l~~~~~~~ii~~~~~~~~ 124 (579)
T PLN03102 96 TRLDATSIAAI----------LRHAKPKILFVDRSFEPL 124 (579)
T ss_pred ccCCHHHHHHH----------HhccCCeEEEEChhhHHH
Confidence 5 455665555 777888888876655443
No 164
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=61.45 E-value=52 Score=31.04 Aligned_cols=84 Identities=8% Similarity=-0.022 Sum_probs=60.4
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH-HHHHHHHHhhCceeeeCCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF-VAGVLGTWFSGCIAVPLALSYP 103 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~-~~~~~A~~~~G~~~v~l~~~~~ 103 (372)
..+|++.+...+..+... .+++++|++...++-..-+ +..+++.+..|+..+..+..
T Consensus 129 v~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-- 186 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKEN--------------------LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-- 186 (436)
T ss_pred EEEehHHHHHHHHHHHhh--------------------cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH--
Confidence 468999888766655543 3788999998877754322 23457778889888877543
Q ss_pred HHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 104 ESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
+.+.+.+++.++.++...+.....+.+
T Consensus 187 -~~~~~~l~~~~~t~~~~~P~~l~~l~~ 213 (436)
T TIGR01923 187 -NQLLEMIANERVTHISLVPTQLNRLLD 213 (436)
T ss_pred -HHHHHHHHHhCCeEEEeHHHHHHHHHh
Confidence 478888999999999988766554433
No 165
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=60.53 E-value=79 Score=28.13 Aligned_cols=75 Identities=13% Similarity=0.204 Sum_probs=49.6
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCC--
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY-- 102 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~-- 102 (372)
..+-.+-+ -|+..+|..|++. |-.|..++.+....... .+...|..+..++-..
T Consensus 10 ~~iG~GHv-~Rcl~LA~~l~~~---------------------g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~ 65 (279)
T TIGR03590 10 SEIGLGHV-MRCLTLARALHAQ---------------------GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSR 65 (279)
T ss_pred ccccccHH-HHHHHHHHHHHHC---------------------CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCch
Confidence 34444443 4678899999764 45677776666554433 2356777776665432
Q ss_pred --CHHHHHHHHhhCCceEEEecc
Q 017382 103 --PESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 103 --~~~~l~~~l~~~~~~~vi~~~ 123 (372)
..+++...+++.+++++|+|.
T Consensus 66 ~~d~~~~~~~l~~~~~d~vV~D~ 88 (279)
T TIGR03590 66 YDDALELINLLEEEKFDILIVDH 88 (279)
T ss_pred hhhHHHHHHHHHhcCCCEEEEcC
Confidence 244688889999999999996
No 166
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=60.50 E-value=97 Score=30.06 Aligned_cols=100 Identities=11% Similarity=0.016 Sum_probs=68.2
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|++.-.. .|. .-.+|...+...+...... .++..+|++....+-+.-.-. .+++++..|+..+..+
T Consensus 20 ~p~~~a~~~~~~--~~~--~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~--~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 20 YGHKTALIFESS--GGV--VRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIF--CWFGLAKIGAIMVPIN 93 (517)
T ss_pred CCCceEEEcccC--CCc--cceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCeEEEEcC
Confidence 566777655321 111 1247888887776666553 478889999998887766544 4788899999888776
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
. ++++.+... +++.++..++..+.....+
T Consensus 94 ~~~~~~~l~~~----------l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 94 ARLLREESAWI----------LQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred cccCHHHHHHH----------HHhcCceEEEEecchhHHH
Confidence 4 566666555 6778888888877655443
No 167
>PRK07638 acyl-CoA synthetase; Validated
Probab=60.46 E-value=85 Score=30.21 Aligned_cols=87 Identities=11% Similarity=0.074 Sum_probs=62.1
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH-HHHHHHHHhhCceeeeCCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF-VAGVLGTWFSGCIAVPLALSYP 103 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~-~~~~~A~~~~G~~~v~l~~~~~ 103 (372)
..+|.+.+...+...+. . .+++.+|++....+-...+ +...+..+..|+..+.. +..+
T Consensus 161 v~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~ 219 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---D-----------------FHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFI 219 (487)
T ss_pred EEEecHHHHHHHHHHHH---h-----------------cCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCC
Confidence 46788777655544332 2 3778899998877655433 44556677788888765 4567
Q ss_pred HHHHHHHHhhCCceEEEeccchHHHHHHH
Q 017382 104 ESELLHVMHDSDISMVLSTEDYREVLQNV 132 (372)
Q Consensus 104 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 132 (372)
+.++...+++.++.++...+.....+...
T Consensus 220 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 248 (487)
T PRK07638 220 PNQVLDKLETENISVMYTVPTMLESLYKE 248 (487)
T ss_pred HHHHHHHHHHcCCeEEEeCcHHHHHHHhC
Confidence 88899999999999999988777665543
No 168
>PRK08308 acyl-CoA synthetase; Validated
Probab=60.29 E-value=1.3e+02 Score=28.22 Aligned_cols=86 Identities=10% Similarity=0.113 Sum_probs=61.9
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh--HHHHHHHHHhhCceeeeCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVPLALSY 102 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~--~~~~~~A~~~~G~~~v~l~~~~ 102 (372)
..+|++.+...+..+...+ ++..+|++...+|.... ++..++..+..|+..+..+. .
T Consensus 119 v~~s~~~l~~~~~~~~~~~--------------------~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~-~ 177 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEAL--------------------NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN-K 177 (414)
T ss_pred EEEehHhHHHHHHHHHHhh--------------------CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC-C
Confidence 4689998877665555433 56678888877776533 34557788888988877654 4
Q ss_pred CHHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 103 PESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
++..+...+++.++.+++..+.....+.+
T Consensus 178 ~~~~~~~~l~~~~~t~~~~~P~~~~~l~~ 206 (414)
T PRK08308 178 NPKFALNILRNTPQHILYAVPLMLHILGR 206 (414)
T ss_pred CHHHHHHHHHHhCCeEEEcCHHHHHHHHh
Confidence 67778888999999999888776655543
No 169
>PRK05857 acyl-CoA synthetase; Validated
Probab=60.02 E-value=73 Score=31.29 Aligned_cols=93 Identities=17% Similarity=0.022 Sum_probs=63.0
Q ss_pred CCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 167 ~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
..|+.++++...+ ...+|...+...+..+...+ ++.++|++...++-+...-. .+++++..|+..+..
T Consensus 26 ~~p~~~a~~~~~~-------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~--~~lA~~~~G~v~v~l 96 (540)
T PRK05857 26 QQPEAIALRRCDG-------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYL--SVLACAKLGAIAVMA 96 (540)
T ss_pred hCCCcEEEeecCC-------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHH--HHHHHHHcCeEEEec
Confidence 3566776654322 14589999987777776544 67889999988877766544 478889999999988
Q ss_pred CC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchH
Q 017382 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (372)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 278 (372)
+. ++.+.+... ++..++..++..+.
T Consensus 97 ~~~~~~~~l~~~----------~~~~~~~~ii~~~~ 122 (540)
T PRK05857 97 DGNLPIAAIERF----------CQITDPAAALVAPG 122 (540)
T ss_pred CccCCHHHHHHH----------HHhcCCceEEEecc
Confidence 65 455555555 44556665555443
No 170
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=59.65 E-value=90 Score=31.59 Aligned_cols=95 Identities=23% Similarity=0.233 Sum_probs=65.8
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|++.... .| ....+|+..+...+..+...+ +++++|++...+|-+--.- ..+++++..|+..+...
T Consensus 97 ~~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v--~~~lA~~~~Gav~v~l~ 170 (655)
T PRK03584 97 RDDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETV--VAMLATASLGAIWSSCS 170 (655)
T ss_pred CCCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCcEEEeeC
Confidence 467777765432 22 135689999887777666544 7889999999998765443 35788899998877665
Q ss_pred -CCchhHHHHHHHhhCCCCCCCCCcceeEeecchH
Q 017382 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (372)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 278 (372)
.+.++.+... ++..++..++..+.
T Consensus 171 ~~~~~~~l~~~----------l~~~~~~~li~~~~ 195 (655)
T PRK03584 171 PDFGVQGVLDR----------FGQIEPKVLIAVDG 195 (655)
T ss_pred CCCCHHHHHHH----------HHHcCCcEEEEccc
Confidence 5677777776 56667777776553
No 171
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=59.64 E-value=82 Score=30.94 Aligned_cols=96 Identities=16% Similarity=0.041 Sum_probs=65.1
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|++..-.+ .++.-.+|...+...+..+...+ +++++|++...++-+.-.-. .+++++..|+..+..+
T Consensus 37 ~p~~~A~~~~~~~---~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~--~~la~~~~G~~~vpl~ 111 (547)
T PRK13295 37 CPDKTAVTAVRLG---TGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTV--LYLACSRIGAVLNPLM 111 (547)
T ss_pred CCCceEEEecCCC---ccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHH--HHHHHHhcCcEEeccc
Confidence 4567777653322 23345789999887776666544 78899999998887665433 5788899999988776
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecchH
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 278 (372)
. ...+.+... ++..++..++....
T Consensus 112 ~~~~~~~l~~~----------l~~~~~~~li~~~~ 136 (547)
T PRK13295 112 PIFRERELSFM----------LKHAESKVLVVPKT 136 (547)
T ss_pred cccCHHHHHHH----------HHhcCceEEEEecc
Confidence 5 455555555 66677777766543
No 172
>PRK06188 acyl-CoA synthetase; Validated
Probab=59.47 E-value=80 Score=30.74 Aligned_cols=84 Identities=17% Similarity=0.067 Sum_probs=62.8
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCH
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPE 104 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~ 104 (372)
..+|+..+...+...... .+++.+|++...+|-...+...+++.+..|+..+..+. ..+
T Consensus 186 v~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~ 244 (524)
T PRK06188 186 VMGTHRSIATMAQIQLAE--------------------WEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDP 244 (524)
T ss_pred eeeehHHHHHHHHHHHhh--------------------cCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCH
Confidence 457888777655443332 37788999998888876666677788888988887764 567
Q ss_pred HHHHHHHhhCCceEEEeccchHHHH
Q 017382 105 SELLHVMHDSDISMVLSTEDYREVL 129 (372)
Q Consensus 105 ~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (372)
+.+...+++.++.++...+.....+
T Consensus 245 ~~~~~~i~~~~~t~~~~~P~~l~~l 269 (524)
T PRK06188 245 AEVLRAIEEQRITATFLVPTMIYAL 269 (524)
T ss_pred HHHHHHHHHhCCEEEEehHHHHHHH
Confidence 8889999999999999887665443
No 173
>PRK07470 acyl-CoA synthetase; Validated
Probab=58.47 E-value=1.3e+02 Score=29.27 Aligned_cols=67 Identities=13% Similarity=0.066 Sum_probs=48.5
Q ss_pred cCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCC-CCCCHHHHHHHHhhCCceEEEeccchHHHHH
Q 017382 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLA-LSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (372)
Q Consensus 64 gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~-~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (372)
++.++|++...+|-...+-...+..+..|+..+.++ ...+++.+...+++.++.++...+.....+.
T Consensus 202 ~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 269 (528)
T PRK07470 202 GTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLV 269 (528)
T ss_pred CCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHH
Confidence 567789998888876554444444455666655443 4567888999999999999999887776553
No 174
>PRK08316 acyl-CoA synthetase; Validated
Probab=58.42 E-value=1e+02 Score=29.81 Aligned_cols=85 Identities=18% Similarity=0.027 Sum_probs=61.2
Q ss_pred eeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCC
Q 017382 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (372)
..+|...+...+..+...+ ++.++|++..+.|-+...-. .+++++..|+..+..+. .+.+.+...
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~--~~~a~~~~G~~~v~l~~~~~~~~i~~~--------- 103 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYAL--LWLACARAGAVHVPVNFMLTGEELAYI--------- 103 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHhcCcEEEecccccCHHHHHHH---------
Confidence 5688888877666665443 67889999988877665433 47888999988887764 455555555
Q ss_pred CCCCcceeEeecchHHHHHHH
Q 017382 264 NRAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 264 ~i~~~~~t~~~~~p~~~~~l~ 284 (372)
+++.++..++........+.
T Consensus 104 -l~~~~~~~ii~~~~~~~~~~ 123 (523)
T PRK08316 104 -LDHSGARAFLVDPALAPTAE 123 (523)
T ss_pred -HHhCCCCEEEEccchHHHHH
Confidence 67788888888777665554
No 175
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=58.08 E-value=1.1e+02 Score=30.28 Aligned_cols=95 Identities=19% Similarity=0.159 Sum_probs=68.0
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|++.. + -.+|+..+...+......+ ++..+|++....|-+...- ..+++++..|+..+..+
T Consensus 45 ~p~~~a~~~~--~-------~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~--~~~lA~~~~G~~~v~l~ 113 (573)
T PRK05605 45 FGDRPALDFF--G-------ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHI--VAFYAVLRLGAVVVEHN 113 (573)
T ss_pred CCCCeEEEeC--C-------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH--HHHHHHHhcCcEEeecC
Confidence 4677776542 1 2489998887777766544 6789999998888766543 35788899999988775
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
. ++.+.+... +.+.++..++..+.....+
T Consensus 114 ~~~~~~~l~~~----------l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 114 PLYTAHELEHP----------FEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred cCCCHHHHHHH----------HhccCCcEEEechhhHHHH
Confidence 4 566666666 7778888888777665544
No 176
>PRK07788 acyl-CoA synthetase; Validated
Probab=57.94 E-value=67 Score=31.54 Aligned_cols=83 Identities=20% Similarity=0.127 Sum_probs=60.8
Q ss_pred eeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (372)
.+|+..+...+..+...+ ++..+|++...++-+-.. +..+++++..|+..+..+. .+.+.+...
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 141 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGF--VLALYAAGKVGARIILLNTGFSGPQLAEV---------- 141 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHhcCCEEEEeCCCCCHHHHHHH----------
Confidence 589999887776666544 678899998887665433 3357889999999998876 455555555
Q ss_pred CCCcceeEeecchHHHHHH
Q 017382 265 RAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~~~l 283 (372)
+++.++..++..+.+...+
T Consensus 142 l~~~~~~~ii~~~~~~~~~ 160 (549)
T PRK07788 142 AAREGVKALVYDDEFTDLL 160 (549)
T ss_pred HHhcCCcEEEECchhHHHH
Confidence 6778899888877766554
No 177
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=57.52 E-value=1.3e+02 Score=30.32 Aligned_cols=95 Identities=22% Similarity=0.243 Sum_probs=65.7
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|++.... .+|. .-.+|...+...+..+...+ ++.++|++...+|..--.- ..+++++..|+..+...
T Consensus 65 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v--~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALVTVSS-ETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAV--FAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH--HHHHHHHHhCCEEEecC
Confidence 457777765332 2222 24689999887776665544 7889999999998875443 35788899998877664
Q ss_pred -CCchhHHHHHHHhhCCCCCCCCCcceeEeecch
Q 017382 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (372)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 277 (372)
.+.++.+... ++..++.+++...
T Consensus 140 ~~~~~~~l~~~----------l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GGFASHSLALR----------IDDATPKLIVSAD 163 (628)
T ss_pred CCCCHHHHHHH----------HHhcCceEEEECC
Confidence 5677777766 6667788777654
No 178
>PRK13388 acyl-CoA synthetase; Provisional
Probab=57.19 E-value=1.1e+02 Score=30.04 Aligned_cols=82 Identities=9% Similarity=-0.135 Sum_probs=58.3
Q ss_pred eeehhhHHHHHHHHHhhc---cc-CCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEAW---EY-TSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~-~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (372)
.+|+..+...+..+...+ ++ .++|++...++-+.-.-. .+++++..|+..+.++. +..+.+...
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~--~~lA~~~~Ga~~v~l~p~~~~~~l~~~--------- 94 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLF--WLAAAALGGYVLVGLNTTRRGAALAAD--------- 94 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHH--HHHHHHhCCCEEEEecccCChHHHHHH---------
Confidence 689999888777766544 56 688999888886655433 57888999999887765 455555555
Q ss_pred CCCCcceeEeecchHHHHH
Q 017382 264 NRAGEAITAFTGVPTMYTR 282 (372)
Q Consensus 264 ~i~~~~~t~~~~~p~~~~~ 282 (372)
+++.++..++........
T Consensus 95 -l~~~~~~~~i~~~~~~~~ 112 (540)
T PRK13388 95 -IRRADCQLLVTDAEHRPL 112 (540)
T ss_pred -HHhcCCCEEEEChhhhHH
Confidence 667788877776655443
No 179
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=57.15 E-value=77 Score=31.14 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=63.9
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++++-... | ..+|+..+...+..+...+ ++.++|++...++-+...-. .+++++..|+..+..+
T Consensus 41 ~p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~--~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 41 YADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGI--VALGIMAAGGVFSGAN 111 (546)
T ss_pred CCCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHH--HHHHHHHhCcEeccCC
Confidence 466777653221 2 4689999988777766544 67889999988777665433 4788899999888776
Q ss_pred CC-chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHH
Q 017382 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (372)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 282 (372)
.. ..+.+... +++.++..++..+..+..
T Consensus 112 ~~~~~~~l~~~----------l~~~~~~~~i~~~~~~~~ 140 (546)
T PLN02330 112 PTALESEIKKQ----------AEAAGAKLIVTNDTNYGK 140 (546)
T ss_pred ccCCHHHHHHH----------HHhcCCeEEEEccchhhh
Confidence 53 44555444 566677766665554443
No 180
>PRK07798 acyl-CoA synthetase; Validated
Probab=57.13 E-value=1.3e+02 Score=29.08 Aligned_cols=85 Identities=11% Similarity=-0.022 Sum_probs=58.9
Q ss_pred eeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCC
Q 017382 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (372)
-.+|...+...+..+...+ ++..+|++....+-+-.. +..+++++..|+..+..+. .+.+.+...
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~--~~~~~a~~~~G~~~v~l~~~~~~~~l~~~--------- 95 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEY--VEAMLGAFKARAVPVNVNYRYVEDELRYL--------- 95 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHhcCeEEEecCcCCCHHHHHHH---------
Confidence 3688888877666665444 678899988887665443 3357888999999887765 455555555
Q ss_pred CCCCcceeEeecchHHHHHHH
Q 017382 264 NRAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 264 ~i~~~~~t~~~~~p~~~~~l~ 284 (372)
+++.++..++..+.....+.
T Consensus 96 -l~~~~~~~~~~~~~~~~~~~ 115 (533)
T PRK07798 96 -LDDSDAVALVYEREFAPRVA 115 (533)
T ss_pred -HhhcCCCEEEEchhhHHHHH
Confidence 67778888887766554443
No 181
>PLN02246 4-coumarate--CoA ligase
Probab=56.20 E-value=1.2e+02 Score=29.77 Aligned_cols=97 Identities=16% Similarity=0.148 Sum_probs=64.7
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++++... + +-.+|+..+...+..+...+ ++.++|++...++-+... +..+++++..|+..+..+
T Consensus 36 ~~~~~a~~~~~---~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~ 106 (537)
T PLN02246 36 FSDRPCLIDGA---T----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEF--VLAFLGASRRGAVTTTAN 106 (537)
T ss_pred CCCCeEEEecC---C----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH--HHHHHHHHHcCEEEecCC
Confidence 46677765321 1 23689999887776666544 688999999887766433 335788899999998776
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
. +....+... ++..++..++........+
T Consensus 107 ~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 107 PFYTPAEIAKQ----------AKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCCHHHHHHH----------HHhcCCcEEEEccchHHHH
Confidence 5 445555444 6667777777666554443
No 182
>PRK07514 malonyl-CoA synthase; Validated
Probab=55.94 E-value=1.3e+02 Score=28.92 Aligned_cols=84 Identities=15% Similarity=0.093 Sum_probs=60.2
Q ss_pred eeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCC
Q 017382 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (372)
..+|...+...+..+...+ ++..+|++....+-+... ...+++++..|+..+..+. ++...+...
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~--~v~~la~~~~G~~~v~l~~~~~~~~~~~~--------- 95 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEA--LALYLATLRAGAVFLPLNTAYTLAELDYF--------- 95 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEEECCCCCCHHHHHHH---------
Confidence 4688888877666666544 688999998888876443 3357888999999887765 455555555
Q ss_pred CCCCcceeEeecchHHHHHH
Q 017382 264 NRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 264 ~i~~~~~t~~~~~p~~~~~l 283 (372)
++..+++.++..+.....+
T Consensus 96 -l~~~~~~~ii~~~~~~~~~ 114 (504)
T PRK07514 96 -IGDAEPALVVCDPANFAWL 114 (504)
T ss_pred -HHhCCCcEEEEccchhHHH
Confidence 6777888887777665544
No 183
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=55.79 E-value=1.1e+02 Score=30.92 Aligned_cols=94 Identities=24% Similarity=0.236 Sum_probs=66.1
Q ss_pred CCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC-
Q 017382 169 GEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP- 244 (372)
Q Consensus 169 ~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~- 244 (372)
+++++++.... +|. ...+|...+...+..++..+ +++.+|++...+|.+--.-. .+++++..|+..+...
T Consensus 98 ~~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~--~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 98 GTEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVV--AMLATASVGAIWSSCSP 171 (652)
T ss_pred CCCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHhCeEEEecCC
Confidence 45666665432 222 24689999888777766544 78899999999998755444 4778888888877665
Q ss_pred CCchhHHHHHHHhhCCCCCCCCCcceeEeecchH
Q 017382 245 KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (372)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 278 (372)
.+.++.+... +++.++.+++....
T Consensus 172 ~~~~~~l~~~----------l~~~~~k~li~~~~ 195 (652)
T TIGR01217 172 DFGARGVLDR----------FQQIEPKLLFTVDG 195 (652)
T ss_pred CCCHHHHHHH----------HHhcCCcEEEEccc
Confidence 4677777776 66777887776553
No 184
>PRK06839 acyl-CoA synthetase; Validated
Probab=55.77 E-value=1.5e+02 Score=28.51 Aligned_cols=96 Identities=9% Similarity=-0.041 Sum_probs=68.3
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
.++.+|++. + ...+|+..+...+..+...+ ++.+++++...++-+...-. .+++++..|+..+..
T Consensus 15 ~p~~~a~~~---~------~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~--~~la~~~~G~~~~~~ 83 (496)
T PRK06839 15 HPDRIAIIT---E------EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIV--LLFAIAKVECIAVPL 83 (496)
T ss_pred CCCCeEEEE---C------CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHH--HHHHHHhcCcEEEec
Confidence 456776663 1 35789999988777776544 57789999888877755433 578889999998887
Q ss_pred CC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHH
Q 017382 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 284 (372)
+. .++..+... +++.+++.++..+.....+.
T Consensus 84 ~~~~~~~~~~~~----------l~~~~~~~i~~~~~~~~~~~ 115 (496)
T PRK06839 84 NIRLTENELIFQ----------LKDSGTTVLFVEKTFQNMAL 115 (496)
T ss_pred CcccCHHHHHHH----------HHhcCceEEEEcHHHHHHHH
Confidence 65 455655555 66778888888777665543
No 185
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=54.86 E-value=1.2e+02 Score=30.11 Aligned_cols=95 Identities=11% Similarity=-0.023 Sum_probs=65.6
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|++.- .-.+|+..+...+..+... .++.++|++...++-+...- ..+++++..|+..+..+
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v--~~~lA~~~~G~~~v~l~ 118 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYL--AAWLGLAKLGAVVALLN 118 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH--HHHHHHHhcCcEEeecC
Confidence 4567776641 1358899888776666554 46788999998887765543 35788899999888776
Q ss_pred CC-chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
.. ..+.+... +++.++..++........+
T Consensus 119 ~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 119 TQQRGAVLAHS----------LNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred CCCCHHHHHHH----------HHhcCCCEEEEChHHHHHH
Confidence 54 44554444 6677888888776655544
No 186
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=54.54 E-value=1.1e+02 Score=29.55 Aligned_cols=83 Identities=11% Similarity=-0.033 Sum_probs=59.4
Q ss_pred eeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (372)
.+|...+...+......+ +++.+|++....+-+...-. .+++++..|+..+..+. +....+...
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~--~~la~~~~G~~~~~l~~~~~~~~~~~~---------- 78 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFE--VYWAARRSGLYYTPINWHLTAAEIAYI---------- 78 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHH--HHHHHHhcCcEEEecccccCHHHHHHH----------
Confidence 588888877666665544 68899999988887755443 47888999999988765 444444444
Q ss_pred CCCcceeEeecchHHHHHH
Q 017382 265 RAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~~~l 283 (372)
+++.+++.++..+.....+
T Consensus 79 ~~~~~~~~ii~~~~~~~~~ 97 (502)
T PRK08276 79 VDDSGAKVLIVSAALADTA 97 (502)
T ss_pred HhcCCCCEEEEccchhhHH
Confidence 6677888887777665544
No 187
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=54.43 E-value=1.4e+02 Score=29.26 Aligned_cols=94 Identities=18% Similarity=0.163 Sum_probs=65.4
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++++.. ...+|+..+...+..+...+ ++..+|++...++-+.-.-. .+++++..|+..+..+
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~--~~la~~~~G~~~v~v~ 104 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPV--AIAAVLRAGYVVVNVN 104 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHH--HHHHHHhcCeEEeccC
Confidence 4566776642 24689999987777666544 68889999888777655443 4788899999999776
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHH
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 282 (372)
. +..+.+... +++.+++.++........
T Consensus 105 ~~~~~~~~~~~----------~~~~~~~~vi~~~~~~~~ 133 (557)
T PRK07059 105 PLYTPRELEHQ----------LKDSGAEAIVVLENFATT 133 (557)
T ss_pred cccCHHHHHHH----------HHccCceEEEEchhhHHH
Confidence 5 455555555 677788887776655433
No 188
>PLN02614 long-chain acyl-CoA synthetase
Probab=54.26 E-value=2.2e+02 Score=28.91 Aligned_cols=102 Identities=12% Similarity=-0.041 Sum_probs=67.5
Q ss_pred CCCCcEEEEec--CCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEE
Q 017382 168 RGEDPALIVYT--SGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF 242 (372)
Q Consensus 168 ~~~~~a~i~~T--SGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~ 242 (372)
.++.+|++... .|..|. -..+|+..+...+..+...+ ++.++|++...++-+.-.-. .+++++..|+..+.
T Consensus 58 ~pd~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~--~~lA~~~~Gav~vp 133 (666)
T PLN02614 58 YPNNPMLGRREIVDGKPGK--YVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWII--SMEACNAHGLYCVP 133 (666)
T ss_pred CCCCCeEEEecccCCCCCC--cEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEE
Confidence 46677765321 121121 23478888877776665544 78899999888887655433 47888999988887
Q ss_pred cCC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 243 MPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 243 ~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
... +.++.+-.. ++..++.+++.....+..+
T Consensus 134 l~~~~~~~~l~~i----------l~~~~~~~vi~~~~~~~~~ 165 (666)
T PLN02614 134 LYDTLGAGAVEFI----------ISHSEVSIVFVEEKKISEL 165 (666)
T ss_pred ecCCCCHHHHHHH----------HhccCCCEEEECHHHHHHH
Confidence 765 455555555 7778899888877655444
No 189
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=54.16 E-value=1.4e+02 Score=29.42 Aligned_cols=94 Identities=17% Similarity=0.166 Sum_probs=65.9
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh----cccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA----WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
.++.++++.. | -.+|+..+...+..+... .+++.+|++..++|-..-.- ..+++++..|+..+..
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYP--IATFGVLRAGLTVVNV 106 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH--HHHHHHHHhCeEEecc
Confidence 4677776642 2 258888887777666643 47889999998887765443 3578889999999866
Q ss_pred C-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHH
Q 017382 244 P-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (372)
Q Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 282 (372)
+ .+..+.+... +++.+++.++........
T Consensus 107 ~p~~~~~~~~~~----------l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 107 NPLYTPRELKHQ----------LIDSGASVLVVIDNFGTT 136 (560)
T ss_pred CccCCHHHHHHH----------HHhcCCeEEEEcchhHHH
Confidence 5 4566666666 677788888776655443
No 190
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=54.03 E-value=1.4e+02 Score=29.48 Aligned_cols=97 Identities=13% Similarity=0.103 Sum_probs=66.5
Q ss_pred CCCceEEEe--C-------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh-HHH
Q 017382 14 ARDSVAIRA--D-------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE-FVA 83 (372)
Q Consensus 14 ~~~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~-~~~ 83 (372)
.++.+|++. . +..+|...+...+..... . .++.++|++....|-... .+.
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~l~~~pl~h~~g~~ 229 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIA---I-----------------VGYGEDDVYLHTAPLCHIGGLS 229 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHh---h-----------------cCCCCCCEEEEecCchhhccHH
Confidence 356666663 1 246888887655444332 2 378889988887775432 233
Q ss_pred HHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 84 GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 84 ~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
..++.+..|+..+.. +.+.+..+...+++.++.++...+.....+.+
T Consensus 230 ~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 230 SALAMLMVGACHVLL-PKFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred HHHHHHHcCceEEec-CCCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 466778888877765 45678889999999999999998877665543
No 191
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=53.74 E-value=1.5e+02 Score=29.23 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=65.9
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
.++.+|++. . +..+|+..+...+..+...+ ++..+|++...+|-+.-.-. .+++++..|+..+..
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~--~~la~~~~Ga~~v~l 105 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPV--AVFGAMRAGLIVVNT 105 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHH--HHHHHHHcCeEEeec
Confidence 466777663 1 13589999888777776544 67899999999888655543 478889999999877
Q ss_pred CC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHH
Q 017382 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYT 281 (372)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~ 281 (372)
+. ++.+.+... +++.++..++.......
T Consensus 106 ~~~~~~~~l~~~----------l~~~~~~~ii~~~~~~~ 134 (562)
T PRK05677 106 NPLYTAREMEHQ----------FNDSGAKALVCLANMAH 134 (562)
T ss_pred CCCCCHHHHHHH----------HhccCceEEEEecchhh
Confidence 64 556666666 67778888776655443
No 192
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=53.03 E-value=1.6e+02 Score=29.01 Aligned_cols=92 Identities=22% Similarity=0.196 Sum_probs=65.6
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++.+...-+. .+|++.+...+......+ ++.++|++...+|-+.-+-. .+++++..|+..+.++
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~--~~~a~~~~Gav~vpln 94 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLI--AFLAALRAGAVAVPLN 94 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHhcCEEEeecC
Confidence 45666666654433 899999988877776554 46689999888887755533 5788899999999987
Q ss_pred CC-chhHHHHHHHhhCCCCCCCCCcceeEeecchH
Q 017382 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPT 278 (372)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~ 278 (372)
.. .+..+... ++..++..++....
T Consensus 95 ~~~~~~~l~~~----------l~~~~~~~~~~~~~ 119 (534)
T COG0318 95 PRLTPRELAYI----------LNDAGAKVLITSAE 119 (534)
T ss_pred cccCHHHHHHH----------HHhcCCeEEEEccc
Confidence 65 45554444 55667787777766
No 193
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=52.90 E-value=71 Score=27.61 Aligned_cols=59 Identities=15% Similarity=0.007 Sum_probs=41.9
Q ss_pred CCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH
Q 017382 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (372)
Q Consensus 67 ~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (372)
+++.| +....+-.-..+-+++...|..+..+-|...+..-...++..++.++.++..+.
T Consensus 49 ~~~~v-v~~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~ 107 (244)
T cd00640 49 PKGVI-IESTGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDFD 107 (244)
T ss_pred CCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 34444 444556666777777778998777666655566677889999999999987643
No 194
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=52.65 E-value=11 Score=37.71 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=25.5
Q ss_pred CCCCCcEEEEecCCCC-CCCceeeeehhhHH
Q 017382 167 QRGEDPALIVYTSGTT-GKPKGVVHTHKSID 196 (372)
Q Consensus 167 ~~~~~~a~i~~TSGtT-G~pK~v~~s~~~l~ 196 (372)
..++.+.+...||||| |.+|-+.+|...+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 4567788999999999 89999999996654
No 195
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=52.65 E-value=93 Score=34.80 Aligned_cols=97 Identities=14% Similarity=0.003 Sum_probs=64.0
Q ss_pred CCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 167 ~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
..|+.+|++...+...+......+|+..+...+..+...+ ++++++++...++-+...-. .+++++..|+..+.+
T Consensus 248 ~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~--~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 248 KHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVV--AVMGVLKAGATFSVI 325 (1389)
T ss_pred hCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHH--HHHHHHhhCcEEecc
Confidence 4577888775432211112234689999988777776554 67899999998887755533 588999999998888
Q ss_pred CCC-chhHHHHHHHhhCCCCCCCCCcceeEeec
Q 017382 244 PKF-SVRGIWQRWRESYPVNGNRAGEAITAFTG 275 (372)
Q Consensus 244 ~~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 275 (372)
+.. .++.+... ++..++..++.
T Consensus 326 dp~~p~~~~~~~----------l~~~~~~~li~ 348 (1389)
T TIGR03443 326 DPAYPPARQTIY----------LSVAKPRALIV 348 (1389)
T ss_pred CCCCcHHHHHHH----------HHhcCCCEEEE
Confidence 764 44444443 45556655554
No 196
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=52.45 E-value=1.8e+02 Score=28.40 Aligned_cols=94 Identities=7% Similarity=0.006 Sum_probs=65.6
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh--HH
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FV 82 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~--~~ 82 (372)
.++.+|++. .+..+|+..+...+......+ ++.++|++....|-... +.
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~--------------------~~~~~d~~l~~~p~~~~~g~~ 247 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS--------------------NSTPESVVLAVLPLFHVTGMV 247 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh--------------------CCCCCceEEEEcCchHHHHHH
Confidence 456777764 124688888877665443332 67788988877765432 33
Q ss_pred HHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHH
Q 017382 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (372)
Q Consensus 83 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (372)
..+++.+..|+..+..+. ..++.+.+.+++.++.++...+.....
T Consensus 248 ~~~~~~l~~G~~i~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~ 292 (546)
T PRK08314 248 HSMNAPIYAGATVVLMPR-WDREAAARLIERYRVTHWTNIPTMVVD 292 (546)
T ss_pred HHHHHHHHcCCeEEecCC-CCHHHHHHHHHHhcCceecccHHHHHH
Confidence 456788888998888764 567888899999999998887765543
No 197
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=51.54 E-value=1.2e+02 Score=29.89 Aligned_cols=96 Identities=18% Similarity=0.132 Sum_probs=69.4
Q ss_pred EEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc-CCCc
Q 017382 173 ALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM-PKFS 247 (372)
Q Consensus 173 a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~-~~~~ 247 (372)
..|+|-+-.++. -.+|.+.|......+.+.+ +. .+|++..++|+.--.-. .++++.-.|+..... +.|.
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~--a~LA~~riGAI~~~vf~~f~ 100 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVI--ALLATARIGAIPAVVSPGLS 100 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHH--HHHHHHHcCCEEeecccCCC
Confidence 344444434343 6789998887777766655 35 89999999999776644 578888888655544 5689
Q ss_pred hhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHH
Q 017382 248 VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 248 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 284 (372)
++.+... +...++.+++.....+....
T Consensus 101 ~~al~~R----------i~d~~~k~vit~d~~~~~gk 127 (528)
T COG0365 101 AEAVADR----------IADLGPKVLIADDGTFRNGK 127 (528)
T ss_pred HHHHHHH----------HHccCCCEEEEecccccccc
Confidence 9999888 67778888887777776543
No 198
>PRK13391 acyl-CoA synthetase; Provisional
Probab=51.04 E-value=2e+02 Score=27.89 Aligned_cols=97 Identities=12% Similarity=0.066 Sum_probs=67.8
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++.+...+| -.+|...+...+..+...+ ++.+++++..+.+-+...-. .+++++..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~--~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLE--VCWAAERSGLYYTCVN 80 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHhccEEeccc
Confidence 4567776665443 2488888877766665544 67889999888877665543 4788899999998776
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
. .+...+... +++.++..++..+.....+
T Consensus 81 ~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 81 SHLTPAEAAYI----------VDDSGARALITSAAKLDVA 110 (511)
T ss_pred cccCHHHHHHH----------HhccCCcEEEEchhhHHHH
Confidence 5 455555555 6777888887777665443
No 199
>PRK05850 acyl-CoA synthetase; Validated
Probab=51.02 E-value=1.9e+02 Score=28.49 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=65.2
Q ss_pred CCCCcEEEEecC-C-CCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEE
Q 017382 168 RGEDPALIVYTS-G-TTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF 242 (372)
Q Consensus 168 ~~~~~a~i~~TS-G-tTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~ 242 (372)
.++.++++.... + ..|. ...+|+..+...+..+...+ + .++|++...++-+...- ..+++++..|+..+.
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~--~~~lA~~~~G~v~vp 88 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYI--VAFLGALQAGLIAVP 88 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHH--HHHHHHHHcCceEEe
Confidence 456776654321 1 1121 24689998877666665544 3 47899988888764433 357888999999998
Q ss_pred cCC----CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 243 MPK----FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 243 ~~~----~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
.+. .+.+.+... ++..++..++..+.....+
T Consensus 89 l~~~~~~~~~~~l~~~----------l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 89 LSVPQGGAHDERVSAV----------LRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred cCCCCccchHHHHHHH----------HHhcCCCEEEEcHHHHHHH
Confidence 864 234455444 6677888877777665544
No 200
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=50.89 E-value=1.7e+02 Score=29.34 Aligned_cols=95 Identities=20% Similarity=0.208 Sum_probs=65.0
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|++.. +..+|. .-.+|...+...+..+... .+++++|++...+|-.--.-. .+++++..|+..+...
T Consensus 66 ~p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 66 RPEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAF--AMLACARIGAIHSVVF 140 (629)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeC
Confidence 4677776643 222222 3468999988776666554 478899999999888655433 4788889998877664
Q ss_pred -CCchhHHHHHHHhhCCCCCCCCCcceeEeecch
Q 017382 245 -KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (372)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 277 (372)
.+.++.+... ++..++.+++...
T Consensus 141 ~~~~~~~l~~~----------l~~~~~~~li~~~ 164 (629)
T PRK10524 141 GGFASHSLAAR----------IDDAKPVLIVSAD 164 (629)
T ss_pred CCCCHHHHHHH----------HHhcCCcEEEEcc
Confidence 4667777666 6667788777654
No 201
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=50.56 E-value=1.9e+02 Score=27.95 Aligned_cols=96 Identities=9% Similarity=-0.031 Sum_probs=65.7
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH--H
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF--V 82 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~--~ 82 (372)
.++.++++. .+..+|++.+...+.... ... .+++++|++....+-...+ .
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~---~~~----------------~~~~~~d~~l~~~p~~~~~~~~ 219 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA---RNT----------------LGIREDDVVFSAAKLFFAYGLG 219 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh---HHh----------------cCCCCCCEEEEcCchHHHHHHH
Confidence 356666653 135688888866543322 221 4788999988777755433 2
Q ss_pred HHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHH
Q 017382 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (372)
Q Consensus 83 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (372)
..+++.+..|+.++..+....+..+...+++.++.++...+.....
T Consensus 220 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 220 NALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred HHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 3456667788888777766678888899999999999998865443
No 202
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=50.51 E-value=2e+02 Score=29.51 Aligned_cols=86 Identities=12% Similarity=0.010 Sum_probs=62.3
Q ss_pred eeeehhhHHHHHHHHHh---hcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCC
Q 017382 188 VVHTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNG 263 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (372)
..+|...+...+..+.. ..+++++|++...++-+.-.-. ..++++..|+..+... .+.++.+...
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~--~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 173 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLI--ALQGCFRQNITVVTIYASLGEEALCHS--------- 173 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCeEEEecCCCCHHHHHHH---------
Confidence 45788888877776655 3478899999888876544333 4678888998888665 4566666665
Q ss_pred CCCCcceeEeecchHHHHHHHH
Q 017382 264 NRAGEAITAFTGVPTMYTRLIQ 285 (372)
Q Consensus 264 ~i~~~~~t~~~~~p~~~~~l~~ 285 (372)
++..++.++++.+..+..+.+
T Consensus 174 -l~~s~~~~li~~~~~~~~l~~ 194 (696)
T PLN02387 174 -LNETEVTTVICDSKQLKKLID 194 (696)
T ss_pred -HHccCCCEEEECHHHHHHHHH
Confidence 777889999888777766644
No 203
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=50.38 E-value=1.7e+02 Score=29.98 Aligned_cols=94 Identities=11% Similarity=0.099 Sum_probs=63.2
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC--HhHH
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFV 82 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~--~~~~ 82 (372)
.++.+|++. .+..+|++.+...+...... .++.++|++...+|-. ..+.
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~Pl~h~~g~~ 422 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTI--------------------ADFTPNDRFMSALPLFHSFGLT 422 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHh--------------------hCCCccCeEEEcCcchhhhhhH
Confidence 456777763 13468988887665544432 3778899998887753 3344
Q ss_pred HHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHH
Q 017382 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (372)
Q Consensus 83 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (372)
..+++.+..|+..+..+.......+...+++.++..+...+....
T Consensus 423 ~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~ 467 (718)
T PRK08043 423 VGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLG 467 (718)
T ss_pred HHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHH
Confidence 557788888998886654444556667788888888877665443
No 204
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.37 E-value=2e+02 Score=28.38 Aligned_cols=67 Identities=13% Similarity=0.019 Sum_probs=49.7
Q ss_pred ccCCCCCEEEEEcCCCHhH-HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHH
Q 017382 63 LAGGCGARIGIVAKPSFEF-VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~-~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (372)
.++..+|++...+|-...+ ....++.+..|+..+...+..+++.+...+++.++.+++..+.....+
T Consensus 219 ~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (576)
T PRK05620 219 LAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQL 286 (576)
T ss_pred cCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHH
Confidence 4788899998887765443 234467777888777666667888899999999999998877665443
No 205
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=50.32 E-value=1.9e+02 Score=28.12 Aligned_cols=96 Identities=11% Similarity=0.084 Sum_probs=65.3
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHH-
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVA- 83 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~- 83 (372)
.++.+|++. .+..+|...+......... . +++.++|++...+|....+-.
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~-----------------~~~~~~d~~l~~~P~~h~~~~~ 240 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---I-----------------CWLTQQTRYLCALPAAHNYPLS 240 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---h-----------------cCCCcCCEEEECCChHhhhhhh
Confidence 456666663 1346888887766554333 2 377889999888876543332
Q ss_pred --HHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHH
Q 017382 84 --GVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (372)
Q Consensus 84 --~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (372)
..++++..|+..+..+ ...+..+...+++.++.++...+.....+.
T Consensus 241 ~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 288 (527)
T TIGR02275 241 SPGALGVFYAGGCVVLAP-DPSPTDCFPLIERHKVTVTALVPPAVALWM 288 (527)
T ss_pred HHHHHHHHhcCCeEEECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 3567778888776644 446777888899999999999887665443
No 206
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=49.69 E-value=1.8e+02 Score=31.70 Aligned_cols=98 Identities=12% Similarity=0.042 Sum_probs=68.5
Q ss_pred cCCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC--HhH
Q 017382 13 MARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEF 81 (372)
Q Consensus 13 ~~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~--~~~ 81 (372)
..+|.+|.+. .+..+|.+.+...+...... .++.++|++...+|-. ..+
T Consensus 779 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~p~~h~~g~ 838 (1146)
T PRK08633 779 FKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV--------------------FNLRNDDVILSSLPFFHSFGL 838 (1146)
T ss_pred CCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh--------------------cCCCCCCEEEEcCcHHHHHhH
Confidence 3467777764 13468888887766554433 3677889887776643 222
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHH
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (372)
....++.+..|+.++..+...+.+.+...+++.++.++...+...+.+.
T Consensus 839 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 887 (1146)
T PRK08633 839 TVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYL 887 (1146)
T ss_pred HHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHH
Confidence 3345677788888877766677888999999999999999887766544
No 207
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=49.30 E-value=1.2e+02 Score=29.02 Aligned_cols=66 Identities=5% Similarity=-0.012 Sum_probs=50.2
Q ss_pred cCCCCCEEEEEcCCCHhH-HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHH
Q 017382 64 AGGCGARIGIVAKPSFEF-VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (372)
Q Consensus 64 gv~~gd~V~l~~~n~~~~-~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (372)
+++++|++...+|-...+ +..+++.+..|+..+..+ ..+++++...+++.++..+...+.....+.
T Consensus 178 ~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 244 (483)
T PRK03640 178 GLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLL 244 (483)
T ss_pred CCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHH
Confidence 788899999988754322 233567777788877665 467899999999999999999887766554
No 208
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=48.35 E-value=1.2e+02 Score=29.61 Aligned_cols=89 Identities=16% Similarity=0.047 Sum_probs=60.2
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++++. . +| ..+|...+...+..+...+ ++.++|++...+|-+-..- ..+++++..|+..+..+
T Consensus 36 ~pd~~a~~~-~---~~----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~ 105 (547)
T PRK06087 36 MPDKIAVVD-N---HG----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFT--IIYLACLKVGAVSVPLL 105 (547)
T ss_pred CCCceEEEc-C---CC----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHcCcEEeccc
Confidence 456777653 2 12 3589999877766666544 7889999998887765443 35788999999888776
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecc
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (372)
. ++.+.+... ++..++..++..
T Consensus 106 ~~~~~~~l~~~----------l~~~~~~~l~~~ 128 (547)
T PRK06087 106 PSWREAELVWV----------LNKCQAKMFFAP 128 (547)
T ss_pred hhcCHHHHHHH----------HHhcCCeEEEEe
Confidence 5 455555444 556667766653
No 209
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=47.99 E-value=1.9e+02 Score=28.24 Aligned_cols=86 Identities=9% Similarity=0.076 Sum_probs=61.6
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHH---HHHHHHHhhCceeeeCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV---AGVLGTWFSGCIAVPLALS 101 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~---~~~~A~~~~G~~~v~l~~~ 101 (372)
..+|.+.+...+...... .++.++|++...+|-...+- ...++++..|+..+... .
T Consensus 200 V~~s~~~l~~~~~~~~~~--------------------~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~-~ 258 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVEI--------------------CGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAP-D 258 (536)
T ss_pred EEEehHHHHHHHHHHHHh--------------------cCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECC-C
Confidence 568999888876654433 37888999988877654332 24677888898887654 3
Q ss_pred CCHHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 102 YPESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 102 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
..+......+++.++.++...+.....+..
T Consensus 259 ~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 259 PSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred CCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 466777888999999999988776655443
No 210
>PRK09088 acyl-CoA synthetase; Validated
Probab=47.53 E-value=1.7e+02 Score=28.13 Aligned_cols=91 Identities=13% Similarity=-0.034 Sum_probs=61.0
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++.+....| ..+|+..+...+......+ ++..+|++...++-+...-. .+++++..|+..+..+
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~--~~la~~~~G~~~v~~~ 78 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVA--LHFACARVGAIYVPLN 78 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHcCeEEEeeC
Confidence 4566665443333 3589999877776665444 67889999988887766433 4788899998888776
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecch
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 277 (372)
. ..++.+... +++.+++.++...
T Consensus 79 ~~~~~~~~~~~----------~~~~~~~~ii~~~ 102 (488)
T PRK09088 79 WRLSASELDAL----------LQDAEPRLLLGDD 102 (488)
T ss_pred ccCCHHHHHHH----------HHhCCCCEEEEcc
Confidence 4 455555555 5566677666544
No 211
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=47.02 E-value=1.6e+02 Score=29.93 Aligned_cols=84 Identities=11% Similarity=-0.099 Sum_probs=60.6
Q ss_pred eeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCC
Q 017382 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (372)
..+|+..+...+..+...+ ++.++|++...++-+.-.-. .+++++..|+..+.+.. +.++.+...
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~--~~lA~~~~G~v~vpl~~~~~~~~l~~i--------- 144 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWII--AMEACNSQGITYVPLYDTLGANAVEFI--------- 144 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCeEEEecCCCCHHHHHHH---------
Confidence 4589998887777766544 68899999988887655433 47888999988887765 455555555
Q ss_pred CCCCcceeEeecchHHHHHH
Q 017382 264 NRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 264 ~i~~~~~t~~~~~p~~~~~l 283 (372)
++..++.+++.....+..+
T Consensus 145 -l~~s~~~~v~~~~~~~~~~ 163 (660)
T PLN02861 145 -INHAEVSIAFVQESKISSI 163 (660)
T ss_pred -HHcCCCCEEEECHHHHHHH
Confidence 7778899888866655444
No 212
>PRK13390 acyl-CoA synthetase; Provisional
Probab=46.46 E-value=2.5e+02 Score=27.08 Aligned_cols=91 Identities=14% Similarity=0.100 Sum_probs=60.9
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++++... +| -.+|...+...+..+...+ ++.++|++....+-+...-. .+++++..|+..+..+
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~--~~la~~~~Ga~~~~l~ 80 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALV--VLWAALRSGLYITAIN 80 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHH--HHHHHHHhCCEEeccc
Confidence 45677665432 22 3589999987777766544 68899999988887765433 4788899999888776
Q ss_pred CC-chhHHHHHHHhhCCCCCCCCCcceeEeecch
Q 017382 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVP 277 (372)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p 277 (372)
.. .+..+-.. ++..++..+....
T Consensus 81 ~~~~~~~~~~~----------~~~~~~~~~i~~~ 104 (501)
T PRK13390 81 HHLTAPEADYI----------VGDSGARVLVASA 104 (501)
T ss_pred cCCCHHHHHHH----------HHhcCCcEEEEcc
Confidence 54 44444444 5556666665544
No 213
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=46.10 E-value=1.8e+02 Score=28.68 Aligned_cols=81 Identities=12% Similarity=0.111 Sum_probs=57.7
Q ss_pred eeeehhhHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCC
Q 017382 188 VVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVN 262 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~ 262 (372)
..+|...+...+..+...+ +++.+|++..+++-+-..- ..+++++..|+..+..+. +..+.+...
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~--~~~la~~~~G~v~v~~~~~~~~~~l~~~-------- 117 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYP--IAVFGALRAGLIVVNTNPLYTAREMRHQ-------- 117 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEeccCccCCHHHHHHH--------
Confidence 3689999887777666544 6789999998877766543 357888999988887765 455666555
Q ss_pred CCCCCcceeEeecchHHH
Q 017382 263 GNRAGEAITAFTGVPTMY 280 (372)
Q Consensus 263 ~~i~~~~~t~~~~~p~~~ 280 (372)
+++.++..++..+.+.
T Consensus 118 --l~~~~~~~~i~~~~~~ 133 (562)
T PRK12492 118 --FKDSGARALVYLNMFG 133 (562)
T ss_pred --HhccCceEEEeccccc
Confidence 6677778777655443
No 214
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=46.05 E-value=2.1e+02 Score=31.72 Aligned_cols=96 Identities=6% Similarity=-0.023 Sum_probs=66.9
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHH-H
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFV-A 83 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~-~ 83 (372)
.|+.+|.+. .+..+|.+.+.......... .+++++|++....+-+.+.- .
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~~~~fd~~~~ 655 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNH--------------------YPLTADDVVLQKTPCSFDVSVW 655 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHh--------------------cCCCCCCEEEEeCCcchhhhHH
Confidence 456667663 13468888776655443332 38889999998888876543 3
Q ss_pred HHHHHHhhCceeeeCCC--CCCHHHHHHHHhhCCceEEEeccchHHHH
Q 017382 84 GVLGTWFSGCIAVPLAL--SYPESELLHVMHDSDISMVLSTEDYREVL 129 (372)
Q Consensus 84 ~~~A~~~~G~~~v~l~~--~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (372)
.++..+..|+..+..++ ...++.+...+++.++.++...+.....+
T Consensus 656 ~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 656 EFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred HHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 46677788998887665 34677888999999999988877655443
No 215
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=45.60 E-value=92 Score=29.10 Aligned_cols=59 Identities=15% Similarity=0.003 Sum_probs=46.0
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEecc
Q 017382 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 65 v~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (372)
+++|....+....+-.-+.+-+++...|..+..+-|.....+-...++..++++++++.
T Consensus 107 i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 107 ITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 66775555667777788888888899998777666655556668899999999999974
No 216
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=45.23 E-value=80 Score=29.54 Aligned_cols=56 Identities=13% Similarity=0.122 Sum_probs=36.5
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCC-----CCHHHHHHHHhhCCceEEEec
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLST 122 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 122 (372)
+++++||.|++-.+ .|.....++...|+.+++++.+ ...+.+...++. +.++|+..
T Consensus 66 l~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 66 LDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred cCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 47889999887544 4555566777889887776543 355667666643 55666543
No 217
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=44.62 E-value=52 Score=30.52 Aligned_cols=56 Identities=16% Similarity=0.249 Sum_probs=38.6
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCC-----CCCHHHHHHHHhhCCceEEEec
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHDSDISMVLST 122 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi~~ 122 (372)
+|+++||.|++- ..-+..+.-|+..+|+.++.++- ..+++.+...+..-. +.|+..
T Consensus 60 l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 60 LGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp TTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred cCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 599999998876 45577788899999999987764 346888888776544 555543
No 218
>PRK13383 acyl-CoA synthetase; Provisional
Probab=44.61 E-value=1.6e+02 Score=28.52 Aligned_cols=84 Identities=11% Similarity=0.048 Sum_probs=60.0
Q ss_pred eeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (372)
.+|...+...+..+...+ ++.++|++...++-+-.. +..+++++..|+..+..+. +..+.+...
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~v~vpl~~~~~~~~l~~~---------- 127 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGF--VTAVFAVGLLGADVVPISTEFRSDALAAA---------- 127 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEEEcCccCCHHHHHHH----------
Confidence 588888877766666544 678899998888755443 2357888999999998765 455555555
Q ss_pred CCCcceeEeecchHHHHHHH
Q 017382 265 RAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~~~l~ 284 (372)
+++.++..++..+.....+.
T Consensus 128 l~~~~~~~ii~~~~~~~~~~ 147 (516)
T PRK13383 128 LRAHHISTVVADNEFAERIA 147 (516)
T ss_pred HhcCCCCEEEEchhHHHHHH
Confidence 77788888888776655543
No 219
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=44.51 E-value=1.5e+02 Score=29.12 Aligned_cols=84 Identities=8% Similarity=-0.075 Sum_probs=62.7
Q ss_pred eeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (372)
.+|...+...+..+...+ ++.+++++....|-....-. .+++++..|+..+..+. .+.+.+...
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~--~~lA~~~~G~~~vpl~~~~~~~~l~~~---------- 113 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLD--VFLGCAWLGAIAVPINTALRGPQLEHI---------- 113 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHH--HHHHHHHhCCEEEEeccccCHHHHHHH----------
Confidence 588888887777766544 67889999988887766533 57888999999887764 566666666
Q ss_pred CCCcceeEeecchHHHHHHH
Q 017382 265 RAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~~~l~ 284 (372)
+++.+++.++..+.....+.
T Consensus 114 l~~~~~~~l~~~~~~~~~~~ 133 (542)
T PRK06155 114 LRNSGARLLVVEAALLAALE 133 (542)
T ss_pred HHhcCceEEEEChhhHHHHH
Confidence 67788898888776665543
No 220
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=43.96 E-value=33 Score=23.29 Aligned_cols=33 Identities=12% Similarity=0.063 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEE
Q 017382 34 SSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIV 74 (372)
Q Consensus 34 ~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~ 74 (372)
+...++++.|+..|+- .-.+.+|+++||.|-|.
T Consensus 31 e~~~~f~~~L~~~Gv~--------~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 31 ENLRRFARKLKKLGVE--------DALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHHHHHHCCHH--------HHHHHcCCCCCCEEEEc
Confidence 3344555555554431 12233799999999864
No 221
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=43.52 E-value=11 Score=17.40 Aligned_cols=9 Identities=33% Similarity=0.394 Sum_probs=7.0
Q ss_pred ccccccccc
Q 017382 334 RYGMTEFVM 342 (372)
Q Consensus 334 ~YG~tE~~~ 342 (372)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 599998764
No 222
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=43.34 E-value=2.5e+02 Score=25.22 Aligned_cols=58 Identities=14% Similarity=0.049 Sum_probs=43.0
Q ss_pred CCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc
Q 017382 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (372)
Q Consensus 66 ~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (372)
.+|+.| +....+-.-..+-+++...|..+..+-|...+......++..++++++++..
T Consensus 56 ~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 56 KPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred CCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 667766 4566667777777788889987776666554455667899999999999864
No 223
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=42.84 E-value=86 Score=28.13 Aligned_cols=64 Identities=14% Similarity=-0.042 Sum_probs=51.5
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceee-eCCCCCCHHHHHHHHhhCCceEEEeccchH
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV-PLALSYPESELLHVMHDSDISMVLSTEDYR 126 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v-~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (372)
..+++||.|.--..||.--.++.--|-..|..-+ .+..+-.-+++...|+..+++.||++++..
T Consensus 156 v~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~ 220 (354)
T KOG0025|consen 156 VQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR 220 (354)
T ss_pred HhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc
Confidence 3678899999999999777777777777787544 444555788999999999999999998654
No 224
>PLN02479 acetate-CoA ligase
Probab=42.59 E-value=3e+02 Score=27.12 Aligned_cols=95 Identities=14% Similarity=0.018 Sum_probs=66.6
Q ss_pred CCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 167 ~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
..++.++++. +. ..+|...+...+......+ ++.++|++....+-+-..-. .+++++..|+..+..
T Consensus 32 ~~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~--~~la~~~~G~v~v~l 100 (567)
T PLN02479 32 VHPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYE--AHFGVPMAGAVVNCV 100 (567)
T ss_pred hCCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHH--HHHHHHhCCcEEEEe
Confidence 3566776654 21 2578888887777766554 78899999988886554333 478889999888877
Q ss_pred CC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHH
Q 017382 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (372)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 282 (372)
+. +..+.+... +++.++..++..+..+..
T Consensus 101 ~~~~~~~~l~~~----------l~~~~~~~ii~~~~~~~~ 130 (567)
T PLN02479 101 NIRLNAPTIAFL----------LEHSKSEVVMVDQEFFTL 130 (567)
T ss_pred ccccCHHHHHHH----------HhhcCceEEEEchhhhhH
Confidence 65 455555555 778899988887766544
No 225
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=42.52 E-value=1.7e+02 Score=28.23 Aligned_cols=84 Identities=8% Similarity=-0.045 Sum_probs=59.4
Q ss_pred eeehhhHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCC-chhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (372)
.+|...+...+...... .++..+|++..+.|-....-. .+++.+..|+..+..+.. ....+...
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~--~~lA~~~~G~~~v~l~~~~~~~~~~~~---------- 78 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFE--AAYAAMRLGAYAVPVNWHFKPEEIAYI---------- 78 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCeEEEecCcccCHHHHHHH----------
Confidence 57777776666555543 468899999988887665433 478889999998888654 44554444
Q ss_pred CCCcceeEeecchHHHHHHH
Q 017382 265 RAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~~~l~ 284 (372)
+++.+++.++........+.
T Consensus 79 l~~~~~~~i~~~~~~~~~~~ 98 (509)
T PRK12406 79 LEDSGARVLIAHADLLHGLA 98 (509)
T ss_pred HhccCCcEEEEccchhhhhh
Confidence 77788888887776666544
No 226
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=42.00 E-value=1e+02 Score=28.41 Aligned_cols=57 Identities=12% Similarity=0.114 Sum_probs=45.0
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEecc
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (372)
.++++|++|++..--+.-++++.+|-..- +-++.++.+. +-....++.+++.++...
T Consensus 162 ~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 162 ANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 48999999999999999999998887544 8777776553 334456788999999865
No 227
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=41.86 E-value=2.2e+02 Score=25.84 Aligned_cols=58 Identities=5% Similarity=-0.112 Sum_probs=38.8
Q ss_pred CCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH
Q 017382 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (372)
Q Consensus 68 gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (372)
++.|... ..+-.-..+-+++...|..+..+-|...+..-...++..++.+++++..+.
T Consensus 70 ~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~~ 127 (324)
T cd01563 70 VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNFD 127 (324)
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcHH
Confidence 4555444 344555555678888898766555544445567788999999999987543
No 228
>PRK08162 acyl-CoA synthetase; Validated
Probab=41.61 E-value=1.6e+02 Score=28.71 Aligned_cols=95 Identities=17% Similarity=0.062 Sum_probs=68.0
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.+|++. + ...+|...+...+..+...+ ++..+|++....|-+...-. .+++++..|+..+..+
T Consensus 31 ~~~~~a~~~---~------~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~--~~lA~~~~G~~~vpl~ 99 (545)
T PRK08162 31 YPDRPAVIH---G------DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVE--AHFGVPMAGAVLNTLN 99 (545)
T ss_pred CCCCeEEEE---C------CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHH--HHHHHHHhCcEEeccc
Confidence 456676543 1 13589999987777766544 68899999988888765433 4788899998888776
Q ss_pred C-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 245 K-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 245 ~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
. .+...+... ++..+++.++..+.....+
T Consensus 100 ~~~~~~~~~~~----------l~~~~~~~i~~~~~~~~~~ 129 (545)
T PRK08162 100 TRLDAASIAFM----------LRHGEAKVLIVDTEFAEVA 129 (545)
T ss_pred cccChHHHHHH----------HHhCCCeEEEEccchhhHH
Confidence 4 566666666 7778888888877765554
No 229
>PLN02574 4-coumarate--CoA ligase-like
Probab=41.59 E-value=2.9e+02 Score=27.22 Aligned_cols=97 Identities=23% Similarity=0.198 Sum_probs=64.3
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhh----cccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEA----WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~----~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
.++.++++- +.+| ..+|...+...+..+... .++.++|++....+-+...- ..+++++..|+..+..
T Consensus 52 ~~~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~--~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALID---SSTG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFP--VIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEE---CCCC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHH--HHHHHHHHhCeEEeCc
Confidence 456777664 2222 247888887666665543 46789999999988664433 3578889999998877
Q ss_pred CC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
+. .....+... ++..++..++..+.....+
T Consensus 123 ~p~~~~~~l~~~----------l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 123 NPSSSLGEIKKR----------VVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred CcccCHHHHHHH----------HHhcCCEEEEECHHHHHHH
Confidence 65 455555555 5666777777766655444
No 230
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=41.58 E-value=4.3e+02 Score=27.48 Aligned_cols=103 Identities=16% Similarity=0.041 Sum_probs=67.5
Q ss_pred CCCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc------ccCCC-----------CeEEEecCchhHHHHHHH
Q 017382 167 QRGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW------EYTSA-----------DQFLHCLPLHHVHGLFNA 229 (372)
Q Consensus 167 ~~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~------~~~~~-----------d~~l~~~pl~~~~~~~~~ 229 (372)
..++.+|++....| .+ -..+|...+...+..+...+ ++.++ |++...++-+.-.- ..
T Consensus 73 ~~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~--~~ 146 (746)
T PTZ00342 73 LNNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWL--VA 146 (746)
T ss_pred hcCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHH--HH
Confidence 34677777643222 11 13588888877766655433 56666 78877777553322 34
Q ss_pred HHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHHHH
Q 017382 230 LLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRLIQ 285 (372)
Q Consensus 230 ~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 285 (372)
.++++..|+..+.+. .+.++.+... ++..++.+++..+..+..+.+
T Consensus 147 ~lA~~~~Gav~Vpl~~~~~~~el~~i----------l~~s~~~~lv~~~~~~~~l~~ 193 (746)
T PTZ00342 147 DLACMLSGVTTLVMHSKFSIDVIVDI----------LNETKLEWLCLDLDLVEGLLE 193 (746)
T ss_pred HHHHHHcCCeEEEecCCCCHHHHHHH----------HhcCCCCEEEEcHHHHHHHHH
Confidence 677888887777665 4667776666 778899999887777766654
No 231
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=41.41 E-value=3.8e+02 Score=26.81 Aligned_cols=102 Identities=11% Similarity=0.041 Sum_probs=66.6
Q ss_pred CCCCcEEEEec--CCCCCCCceeeeehhhHHHHHHHHHhhc--ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 168 RGEDPALIVYT--SGTTGKPKGVVHTHKSIDAQVQMLTEAW--EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 168 ~~~~~a~i~~T--SGtTG~pK~v~~s~~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
.++.++++... .+++|. ...+|...+...+..+...+ .+.++|++...++-+.-. +..+++++..|+..+.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~--~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDY--VAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhH--HHHHHHHHHcCceeEec
Confidence 46777766532 112232 34689988877776665544 267899999988887554 33578899999988866
Q ss_pred -CCC-c--hhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 244 -PKF-S--VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 244 -~~~-~--~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
+.. . ++.+-.. ++..++..++..+.....+
T Consensus 123 ~~~~~~~~~~~l~~~----------l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 123 FAPELPGHAERLDTA----------LRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCCcchhHHHHHHH----------HHhCCCCEEEEcHHHHHHH
Confidence 322 2 3444444 6777888888877665544
No 232
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=41.07 E-value=1.7e+02 Score=28.24 Aligned_cols=48 Identities=13% Similarity=0.066 Sum_probs=31.9
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHH-HHhhCceeeeC--------------CCCCCHHHHHHHHhhCC
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLG-TWFSGCIAVPL--------------ALSYPESELLHVMHDSD 115 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A-~~~~G~~~v~l--------------~~~~~~~~l~~~l~~~~ 115 (372)
+++++||.| + +..++...-+ +...|++++-+ .-+++.+.+...++..+
T Consensus 112 l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 112 IAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred hCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 589999965 3 3334444444 78888877733 33567888988887543
No 233
>PRK06381 threonine synthase; Validated
Probab=41.04 E-value=1.8e+02 Score=26.44 Aligned_cols=56 Identities=11% Similarity=-0.079 Sum_probs=41.1
Q ss_pred EEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH
Q 017382 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (372)
Q Consensus 71 V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (372)
..+....+-.-+.+-++|...|..+..+-|...+......++..++++++++..+.
T Consensus 65 ~lv~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~~ 120 (319)
T PRK06381 65 GITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKYE 120 (319)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCHH
Confidence 34456667777888888889998776655544445556789999999999987543
No 234
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=40.84 E-value=3.4e+02 Score=29.66 Aligned_cols=97 Identities=9% Similarity=0.086 Sum_probs=65.8
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh--HH
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FV 82 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~--~~ 82 (372)
.++.+|.+. .+..+|.+.+...+......+ +++++|++...+|-... +.
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~--------------------~~~~~d~~l~~~pl~h~~g~~ 850 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI--------------------DFSPEDKVFNALPVFHSFGLT 850 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh--------------------CCCCcCEEEEecchHHHHHHH
Confidence 456676663 124688888876666554433 77889999888775432 23
Q ss_pred HHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHH
Q 017382 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (372)
Q Consensus 83 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (372)
...+..+..|+..+..+.....+.+.+.+++.++..+...+...+.+.
T Consensus 851 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 898 (1140)
T PRK06814 851 GGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYA 898 (1140)
T ss_pred HHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHH
Confidence 445666778888877665555566778888999999988876655443
No 235
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=40.76 E-value=83 Score=25.94 Aligned_cols=47 Identities=9% Similarity=-0.030 Sum_probs=34.4
Q ss_pred CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHH
Q 017382 24 QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGT 88 (372)
Q Consensus 24 ~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~ 88 (372)
...+||+|+.+.+.++|..+.+. ++..+.+.+...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~------------------~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD------------------LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH------------------cCCCCeEEEEECCCcHHHHHHHHH
Confidence 56799999999999999999883 222234556667776666666664
No 236
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=40.57 E-value=1.1e+02 Score=28.52 Aligned_cols=55 Identities=13% Similarity=0.118 Sum_probs=36.3
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCC-----CCHHHHHHHHhhCCceEEEe
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLS 121 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 121 (372)
+++++||.|.+-.+. +.....++...|+.++.++.+ ...+++...+.. +.++|+.
T Consensus 66 ~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 66 LDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred hCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 467899998876554 444556677889887776532 456777777654 5565553
No 237
>PRK06060 acyl-CoA synthetase; Validated
Probab=39.37 E-value=1.9e+02 Score=29.53 Aligned_cols=91 Identities=21% Similarity=0.129 Sum_probs=61.8
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++++. +. .+|+..+...+..+...+ ++..+|++..+++-+...-. .+++++..|+..+..+
T Consensus 19 ~pd~~a~~~---~~-------~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~--~~la~~~aG~~~vpi~ 86 (705)
T PRK06060 19 WYDRPAFYA---AD-------VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQ--LLLACLARGVMAFLAN 86 (705)
T ss_pred CCCceEEEe---cC-------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEecC
Confidence 457777652 11 489999887776665544 68899999999888766544 4788899999888776
Q ss_pred CC-chhHHHHHHHhhCCCCCCCCCcceeEeecchHHH
Q 017382 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMY 280 (372)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~ 280 (372)
.. ....+... +++.++..++......
T Consensus 87 p~~~~~~l~~~----------l~~~~~~~vi~~~~~~ 113 (705)
T PRK06060 87 PELHRDDHALA----------ARNTEPALVVTSDALR 113 (705)
T ss_pred CCCCHHHHHHH----------HhcCCCcEEEEchHHh
Confidence 54 44444444 5666777766654433
No 238
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=38.29 E-value=90 Score=24.39 Aligned_cols=34 Identities=12% Similarity=-0.003 Sum_probs=27.2
Q ss_pred ccCCCCCEEEEEcCC---CHhHHHHHHHHHhhCceee
Q 017382 63 LAGGCGARIGIVAKP---SFEFVAGVLGTWFSGCIAV 96 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n---~~~~~~~~~A~~~~G~~~v 96 (372)
+|+.+++.|.+++.. +.....+++++..+|..-+
T Consensus 90 ~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 90 KGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred cCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 599999999999975 6677777888888886533
No 239
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=37.80 E-value=1e+02 Score=29.85 Aligned_cols=62 Identities=15% Similarity=0.130 Sum_probs=47.2
Q ss_pred cCCCCCEEEEEcC-CCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch
Q 017382 64 AGGCGARIGIVAK-PSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (372)
Q Consensus 64 gv~~gd~V~l~~~-n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (372)
|..+...|...-| =+...+.+=|-=+...++++|++.++.-.++..+++..+|+++++.+++
T Consensus 414 g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeay 476 (653)
T KOG1138|consen 414 GLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAY 476 (653)
T ss_pred cCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhh
Confidence 5555555555544 3455555556666778899999999999999999999999999998764
No 240
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=37.14 E-value=4e+02 Score=25.93 Aligned_cols=95 Identities=14% Similarity=0.164 Sum_probs=63.9
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh--HH
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FV 82 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~--~~ 82 (372)
.++.+|++. .+..+|.+.+...+...... .+++.+|++...+|-... ++
T Consensus 193 ~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~h~~g~~ 252 (538)
T TIGR03208 193 SPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAER--------------------LELGGGDVILMASPMAHQTGFM 252 (538)
T ss_pred CCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhh--------------------cCCCCCCeEEEeCCchhHHHHH
Confidence 456666653 12467887776655444332 367789999888886542 34
Q ss_pred HHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHH
Q 017382 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVL 129 (372)
Q Consensus 83 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (372)
...+..+..|..++.. +.+.+..+...+++.++.++.........+
T Consensus 253 ~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 253 YGLMMPLILNATAVLQ-DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred HHHHHHHHcCCEEEec-CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 4566677778776654 456788888999999999998877665544
No 241
>PRK06178 acyl-CoA synthetase; Validated
Probab=36.77 E-value=2.2e+02 Score=27.98 Aligned_cols=84 Identities=12% Similarity=0.076 Sum_probs=60.7
Q ss_pred eeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (372)
.+|...+...+..+...+ +++.++++....+-+...-. .+++++..|+..+..+. .....+...
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~--~~lA~~~~G~~~v~l~p~~~~~~~~~~---------- 125 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHI--VFFGILKLGAVHVPVSPLFREHELSYE---------- 125 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHH--HHHHHHHhCeEEeecCCCCCHHHHHHH----------
Confidence 588888877766665543 67789999888887765433 47888999988886654 555555555
Q ss_pred CCCcceeEeecchHHHHHHH
Q 017382 265 RAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~~~l~ 284 (372)
+++.++..++..+.....+.
T Consensus 126 l~~~~~~~ii~~~~~~~~l~ 145 (567)
T PRK06178 126 LNDAGAEVLLALDQLAPVVE 145 (567)
T ss_pred HHhcCCcEEEEccchHHHHH
Confidence 67788888888887665543
No 242
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=36.12 E-value=1.5e+02 Score=25.76 Aligned_cols=75 Identities=17% Similarity=0.400 Sum_probs=46.3
Q ss_pred EEEEEcCCCHhHHHHHHHHHhhCce-eeeCCCCCCHHHH---HHHHhhCCceEEEeccchHH-HHHHHHhhcCCcccccC
Q 017382 70 RIGIVAKPSFEFVAGVLGTWFSGCI-AVPLALSYPESEL---LHVMHDSDISMVLSTEDYRE-VLQNVASKSGAKFSLIP 144 (372)
Q Consensus 70 ~V~l~~~n~~~~~~~~~A~~~~G~~-~v~l~~~~~~~~l---~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~ 144 (372)
+..+...+...++.-.+++-..+.. ..+ .-..+++++ ...+++.++++||++..... .+..+....+.+++.++
T Consensus 151 ~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~-~~~ps~~~l~~l~~~ik~~~v~~i~~e~~~~~~~~~~la~~~g~~vv~ld 229 (256)
T PF01297_consen 151 RPVVVYHDAFQYFAKRYGLKVIGVIEISP-GEEPSPKDLAELIKLIKENKVKCIFTEPQFSSKLAEALAKETGVKVVYLD 229 (256)
T ss_dssp GEEEEEESTTHHHHHHTT-EEEEEESSSS-SSSS-HHHHHHHHHHHHHTT-SEEEEETTS-THHHHHHHHCCT-EEEESS
T ss_pred CeEEEEChHHHHHHHhcCCceeeeecccc-ccCCCHHHHHHHHHHhhhcCCcEEEecCCCChHHHHHHHHHcCCcEEEeC
Confidence 6778888899999999988877766 222 333455554 55568899999999875443 34444455555554444
Q ss_pred C
Q 017382 145 P 145 (372)
Q Consensus 145 ~ 145 (372)
.
T Consensus 230 ~ 230 (256)
T PF01297_consen 230 P 230 (256)
T ss_dssp T
T ss_pred C
Confidence 3
No 243
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=36.08 E-value=2.6e+02 Score=23.38 Aligned_cols=86 Identities=12% Similarity=0.091 Sum_probs=47.2
Q ss_pred eEEEecCc--hhHHHHHHHHHHHHHcCceEEEc-CCCchhHHHHHHHhhCCCCCCCCCcceeEeecchHH---H---HHH
Q 017382 213 QFLHCLPL--HHVHGLFNALLAPLYAGATVEFM-PKFSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTM---Y---TRL 283 (372)
Q Consensus 213 ~~l~~~pl--~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~---~---~~l 283 (372)
+++..++- .|..|........=..|..++.. ..-+++.+.+. ++++++.++...-.+ . ..+
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~----------~~~~~pd~v~lS~~~~~~~~~~~~~ 155 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEK----------VKKEKPLMLTGSALMTTTMYGQKDI 155 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHH----------HHHcCCCEEEEccccccCHHHHHHH
Confidence 44444444 57777753222233477777755 45677888888 666777764443222 2 222
Q ss_pred HHhhhhccHHHHHhhhhhc-cCceEEEecCCCCCHHH
Q 017382 284 IQGYEAMDTELQAASASAA-KQLRLMMCGSSALPLPV 319 (372)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~l-~~lr~v~~gG~~~~~~~ 319 (372)
++.+ .+..+ +.++ +++||.+++++.
T Consensus 156 i~~l----------~~~~~~~~v~-i~vGG~~~~~~~ 181 (197)
T TIGR02370 156 NDKL----------KEEGYRDSVK-FMVGGAPVTQDW 181 (197)
T ss_pred HHHH----------HHcCCCCCCE-EEEEChhcCHHH
Confidence 2222 22222 2334 778999987653
No 244
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=35.94 E-value=2.3e+02 Score=27.75 Aligned_cols=84 Identities=14% Similarity=-0.060 Sum_probs=58.8
Q ss_pred eeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCC
Q 017382 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNG 263 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~ 263 (372)
..+|+..+...+..+...+ ++..+|++....+-..-.-. .+++++..|+..+..+. +..+.+...
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~--~~la~~~~G~~~v~l~~~~~~~~l~~~--------- 106 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLE--AWYGIMGIGAICHTVNPRLFPEQIAWI--------- 106 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH--HHHHHHhcCeEeeccccccCHHHHHHH---------
Confidence 4689999887777766544 68889999888777655433 47788889999887765 455555555
Q ss_pred CCCCcceeEeecchHHHHHH
Q 017382 264 NRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 264 ~i~~~~~t~~~~~p~~~~~l 283 (372)
++..++..++........+
T Consensus 107 -l~~~~~~~i~~~~~~~~~~ 125 (542)
T PRK06018 107 -INHAEDRVVITDLTFVPIL 125 (542)
T ss_pred -HhccCCCEEEEccccHHHH
Confidence 6677777777665544433
No 245
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=35.21 E-value=2.5e+02 Score=26.94 Aligned_cols=85 Identities=18% Similarity=0.075 Sum_probs=60.5
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh-HHHHHHHHHhhCceeeeCCCC--
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE-FVAGVLGTWFSGCIAVPLALS-- 101 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~-~~~~~~A~~~~G~~~v~l~~~-- 101 (372)
..+|++.+...+..+... .++..++++....|.... .+..+++++..|+..+..+..
T Consensus 159 v~~s~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~ 218 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD--------------------FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDIT 218 (502)
T ss_pred EEEecHHHHHHHHHHHHh--------------------CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHh
Confidence 468888887665544333 267778888877766532 345567888999998887654
Q ss_pred CCHHHHHHHHhhCCceEEEeccchHHHH
Q 017382 102 YPESELLHVMHDSDISMVLSTEDYREVL 129 (372)
Q Consensus 102 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 129 (372)
..+..+...+++.++..+...+...+.+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~p~~~~~~ 246 (502)
T TIGR01734 219 NNFKLLFEELPKTGLNVWVSTPSFVDMC 246 (502)
T ss_pred cCHHHHHHHHHHcCCeEEEEChhHHHHH
Confidence 3567788888999999988887766543
No 246
>PRK05852 acyl-CoA synthetase; Validated
Probab=34.60 E-value=3.9e+02 Score=26.03 Aligned_cols=87 Identities=13% Similarity=0.064 Sum_probs=60.2
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHh--HHHHHHHHHhhCceeee-CCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFE--FVAGVLGTWFSGCIAVP-LALS 101 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~--~~~~~~A~~~~G~~~v~-l~~~ 101 (372)
..+|+..+...+..+... ++++++|++....|.... +...+++.+..|...+. -...
T Consensus 194 v~~~~~~~~~~~~~~~~~--------------------~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~ 253 (534)
T PRK05852 194 VPWTHANIASSVRAIITG--------------------YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGR 253 (534)
T ss_pred EEecHHHHHHHHHHHHHH--------------------hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcC
Confidence 457888887666555433 367889988888776543 44456777777765443 2335
Q ss_pred CCHHHHHHHHhhCCceEEEeccchHHHHHH
Q 017382 102 YPESELLHVMHDSDISMVLSTEDYREVLQN 131 (372)
Q Consensus 102 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 131 (372)
.++..+...+++.++..++..+.....+..
T Consensus 254 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 283 (534)
T PRK05852 254 FSAHTFWDDIKAVGATWYTAVPTIHQILLE 283 (534)
T ss_pred cCHHHHHHHHHHcCCcEEEcChHHHHHHHh
Confidence 567788888999999999988877665544
No 247
>PLN03013 cysteine synthase
Probab=34.55 E-value=2.8e+02 Score=26.59 Aligned_cols=60 Identities=8% Similarity=-0.072 Sum_probs=46.6
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc
Q 017382 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (372)
Q Consensus 65 v~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (372)
+++|....+....+-.-+.+-+++...|..+..+-|...+.+....++..++.+++++..
T Consensus 171 l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 171 ISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred cCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 477866667777777778888888889987766655556667788899999999999754
No 248
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=34.44 E-value=1.5e+02 Score=27.85 Aligned_cols=69 Identities=19% Similarity=0.271 Sum_probs=48.4
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCC-----CCCHHHHHHHHhhCCceEEEecc-----chHHHHHHH
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHDSDISMVLSTE-----DYREVLQNV 132 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~~~~vi~~~-----~~~~~~~~~ 132 (372)
+++++||-|.+ .+.-|+++.=++...|+.+|.++- +.+++.++..+... .+.||.-. ...+.+.++
T Consensus 69 l~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~~~dm~~i~~l 144 (374)
T COG0399 69 LAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQPCDMDAIMAL 144 (374)
T ss_pred cCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccCCCCHHHHHHH
Confidence 58999996553 367799999999999999998764 45788888888764 55555432 234555555
Q ss_pred Hhh
Q 017382 133 ASK 135 (372)
Q Consensus 133 ~~~ 135 (372)
...
T Consensus 145 a~~ 147 (374)
T COG0399 145 AKR 147 (374)
T ss_pred HHH
Confidence 443
No 249
>PRK07787 acyl-CoA synthetase; Validated
Probab=34.39 E-value=4.2e+02 Score=25.27 Aligned_cols=84 Identities=11% Similarity=-0.011 Sum_probs=58.4
Q ss_pred ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCC--HhHHHHHHHHHhhCceeeeCCCCC
Q 017382 25 KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPS--FEFVAGVLGTWFSGCIAVPLALSY 102 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~--~~~~~~~~A~~~~G~~~v~l~~~~ 102 (372)
..+|+..+...+..+...+ ++.++|++...+|-. .-++..+++.+..|+.++.... .
T Consensus 146 v~~t~~~l~~~~~~~~~~~--------------------~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~ 204 (471)
T PRK07787 146 VVLSRRAIAADLDALAEAW--------------------QWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGR-P 204 (471)
T ss_pred EEEeHHHHHHHHHHHHHhc--------------------CCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCC-C
Confidence 4678888877665555433 677889877666542 2345567888889998887654 4
Q ss_pred CHHHHHHHHhhCCceEEEeccchHHHHH
Q 017382 103 PESELLHVMHDSDISMVLSTEDYREVLQ 130 (372)
Q Consensus 103 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (372)
.++.+...++ .++..+...+.....+.
T Consensus 205 ~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 205 TPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred CHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 6778888888 88888887776554433
No 250
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.35 E-value=1.4e+02 Score=29.15 Aligned_cols=68 Identities=7% Similarity=-0.075 Sum_probs=50.2
Q ss_pred ccCCCCCEEEEEcCCCHhH-HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHH
Q 017382 63 LAGGCGARIGIVAKPSFEF-VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQ 130 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~-~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 130 (372)
.+++++|++..+.|-...+ ....++.+..|+..+...+...++.+...+++.++..+...+.....+.
T Consensus 214 ~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~ 282 (539)
T PRK07008 214 MGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLL 282 (539)
T ss_pred cCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHH
Confidence 4788899988777653222 2334677788988877667778888999999999999988876655443
No 251
>PRK13382 acyl-CoA synthetase; Provisional
Probab=34.28 E-value=2.8e+02 Score=27.16 Aligned_cols=94 Identities=16% Similarity=0.077 Sum_probs=63.7
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++++. .+ -.+|...+...+..+...+ ++.++|++...++-+-.. +..+++++..|+..+..+
T Consensus 56 ~p~~~a~~~--~~-------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~vpl~ 124 (537)
T PRK13382 56 CPDRPGLID--EL-------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGF--VEALLAANRIGADILLLN 124 (537)
T ss_pred CCCCeEEEe--CC-------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHH--HHHHHHHHHcCcEEEecC
Confidence 456777663 11 1588888877766666544 678999999888765543 345888999999999887
Q ss_pred CC-chhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHH
Q 017382 245 KF-SVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTR 282 (372)
Q Consensus 245 ~~-~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 282 (372)
.. ....+-.. +++.++..++........
T Consensus 125 ~~~~~~~l~~~----------l~~~~~~~vi~~~~~~~~ 153 (537)
T PRK13382 125 TSFAGPALAEV----------VTREGVDTVIYDEEFSAT 153 (537)
T ss_pred cccCHHHHHHH----------HHhcCCCEEEEchhhHHH
Confidence 64 44444444 667788887776554433
No 252
>PF02073 Peptidase_M29: Thermophilic metalloprotease (M29); InterPro: IPR000787 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M29 (aminopeptidase T family, clan M-). The protein fold of the peptidase domain and the active site residues are not known for any members of the thermophilic metallo-aminopeptidases family.; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 2AYI_D 1ZJC_A.
Probab=34.15 E-value=1.3e+02 Score=28.46 Aligned_cols=52 Identities=19% Similarity=0.065 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCH--hHHHHHHHHHhhCceeeeC
Q 017382 32 LASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSF--EFVAGVLGTWFSGCIAVPL 98 (372)
Q Consensus 32 l~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~--~~~~~~~A~~~~G~~~v~l 98 (372)
+.++.+++|..|.+.| +++++|+.|.|.++-.. ..-.+.-.+.++|+..+.+
T Consensus 3 ~~~~l~kyA~llV~~g---------------lnvq~Gq~v~I~~~~~~~~l~r~l~~~ay~aGA~~v~v 56 (398)
T PF02073_consen 3 FDERLEKYAELLVKYG---------------LNVQPGQKVLIRAPVEAAPLARALVEEAYEAGAKYVIV 56 (398)
T ss_dssp HHHHHHHHHHHHHHTT---------------T---TT-EEEEEEETT-HHHHHHHHHHHHHTT-SCEEE
T ss_pred chHHHHHHHHHHHHhc---------------cCCCCCCEEEEEecccHHHHHHHHHHHHHHcCCCceEE
Confidence 5678889999998865 48999999999998773 3334455677888844444
No 253
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=34.00 E-value=2.8e+02 Score=25.23 Aligned_cols=58 Identities=7% Similarity=0.011 Sum_probs=43.0
Q ss_pred CCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc
Q 017382 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (372)
Q Consensus 66 ~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (372)
.+++.|.... .+-.-..+-++|...|..+..+-|...+......++..++++++++..
T Consensus 49 ~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 49 NECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred ccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3455555444 566677777888899987776666656666788899999999999765
No 254
>PRK05973 replicative DNA helicase; Provisional
Probab=33.97 E-value=1.8e+02 Score=25.32 Aligned_cols=52 Identities=19% Similarity=0.184 Sum_probs=38.5
Q ss_pred cCCCCCEEEEEcCCC--HhHHHHHHH--HHhhCceeeeCCCCCCHHHHHHHHhhCC
Q 017382 64 AGGCGARIGIVAKPS--FEFVAGVLG--TWFSGCIAVPLALSYPESELLHVMHDSD 115 (372)
Q Consensus 64 gv~~gd~V~l~~~n~--~~~~~~~~A--~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 115 (372)
|+.+|+.+.|.++++ --.+...|+ ..+.|-.++-+....+++++...+...+
T Consensus 60 Gl~~Gsl~LIaG~PG~GKT~lalqfa~~~a~~Ge~vlyfSlEes~~~i~~R~~s~g 115 (237)
T PRK05973 60 QLKPGDLVLLGARPGHGKTLLGLELAVEAMKSGRTGVFFTLEYTEQDVRDRLRALG 115 (237)
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHHHHHHHcC
Confidence 999999999999988 333333333 2344877778888888999888887775
No 255
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=32.83 E-value=5.4e+02 Score=26.12 Aligned_cols=100 Identities=10% Similarity=-0.109 Sum_probs=65.3
Q ss_pred CCCCcEEEEe--cCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEE
Q 017382 168 RGEDPALIVY--TSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF 242 (372)
Q Consensus 168 ~~~~~a~i~~--TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~ 242 (372)
.++.+++... ..|..|.- ..+|...+...+..+...+ ++.++|++...++-+.-... ..++++..|+..+.
T Consensus 55 ~p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~--~~lA~~~~G~v~vp 130 (660)
T PLN02430 55 YPDNKMLGWRRIVDGKVGPY--MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIV--AMEACAAHSLICVP 130 (660)
T ss_pred CCCCceEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCeEEE
Confidence 3456665432 12333321 3468888887777666544 78899999888777655433 46788899988887
Q ss_pred cCC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHHH
Q 017382 243 MPK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYT 281 (372)
Q Consensus 243 ~~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~ 281 (372)
... .+++.+... ++..+++.++.....+.
T Consensus 131 l~~~~~~~~l~~i----------l~~~~~~~v~~~~~~~~ 160 (660)
T PLN02430 131 LYDTLGPGAVDYI----------VDHAEIDFVFVQDKKIK 160 (660)
T ss_pred eccCCCHHHHHHH----------HhccCCCEEEECHHHHH
Confidence 654 556655555 77788998888665443
No 256
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=32.51 E-value=74 Score=22.24 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=29.3
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceee
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV 96 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v 96 (372)
+|++.|+.++.+...-.|.+..+=+++++.-+-+
T Consensus 10 agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 10 AGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred cCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 7999999999999989999999988888875433
No 257
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=32.49 E-value=4.5e+02 Score=25.08 Aligned_cols=51 Identities=18% Similarity=0.218 Sum_probs=35.7
Q ss_pred eehhhHHHHHHHHHh---hcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEE
Q 017382 190 HTHKSIDAQVQMLTE---AWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEF 242 (372)
Q Consensus 190 ~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~ 242 (372)
+|.+.+...+..... ..+++++|.++.-+|--- .+...+|+-+-.|..=|+
T Consensus 54 ~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~--ef~~~~FALlrlGv~PVl 107 (542)
T COG1021 54 LSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVA--EFYITFFALLRLGVAPVL 107 (542)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchH--HHHHHHHHHHHcCcchhh
Confidence 888888877776654 458999999998887644 444456666667754444
No 258
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=32.45 E-value=4.7e+02 Score=25.41 Aligned_cols=90 Identities=10% Similarity=0.002 Sum_probs=58.5
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCC-CCCEEEEEcCCCHhH-H
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGG-CGARIGIVAKPSFEF-V 82 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~-~gd~V~l~~~n~~~~-~ 82 (372)
.++.+|++. .+..+|++.+...+..+...+ ++. ++|++...+|-...+ +
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~h~~g~ 209 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV--------------------GLDAATDVGCSWLPLYHDMGL 209 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh--------------------CCCCCCCeEEEcCCCccCccH
Confidence 345666663 134689988877666554433 666 789888887765432 2
Q ss_pred HHHHHHHhhCceeeeCCC-CC--CHHHHHHHHhhCCceEEEecc
Q 017382 83 AGVLGTWFSGCIAVPLAL-SY--PESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 83 ~~~~A~~~~G~~~v~l~~-~~--~~~~l~~~l~~~~~~~vi~~~ 123 (372)
...++.+..|+..+..+. .+ .+..+...+++.++.++.+..
T Consensus 210 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~ 253 (525)
T PRK05851 210 AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPN 253 (525)
T ss_pred HHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCc
Confidence 345677788888777653 12 355677888888888765544
No 259
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=31.97 E-value=1.2e+02 Score=29.35 Aligned_cols=77 Identities=23% Similarity=0.077 Sum_probs=51.8
Q ss_pred EEEecCCCCCCCceeeeehhhHHHHHHHHHhhcccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC----CCchh
Q 017382 174 LIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAWEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP----KFSVR 249 (372)
Q Consensus 174 ~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~----~~~~~ 249 (372)
-|+.|||++. ++... ...-.+++|.++.--|-++..-.. + -..|..++-.+ +.+++
T Consensus 157 ~IiiT~G~q~----------al~l~-----~~~l~~pGd~v~vE~PtY~~~~~~---~--~~~g~~~~~vp~d~~G~~~e 216 (459)
T COG1167 157 QIVITSGAQQ----------ALDLL-----LRLLLDPGDTVLVEDPTYPGALQA---L--EALGARVIPVPVDEDGIDPE 216 (459)
T ss_pred eEEEeCCHHH----------HHHHH-----HHHhCCCCCEEEEcCCCcHHHHHH---H--HHcCCcEEecCCCCCCCCHH
Confidence 6788888642 33221 122345899999999998875332 2 45677777665 35677
Q ss_pred HHHHHHHhhCCCCCCCCCcceeEeecchHHH
Q 017382 250 GIWQRWRESYPVNGNRAGEAITAFTGVPTMY 280 (372)
Q Consensus 250 ~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~ 280 (372)
.+-+. ++.++|..++.+|++-
T Consensus 217 ~le~~----------~~~~~~k~~y~~P~~q 237 (459)
T COG1167 217 ALEEA----------LAQWKPKAVYVTPTFQ 237 (459)
T ss_pred HHHHH----------HhhcCCcEEEECCCCC
Confidence 76666 6667888999998874
No 260
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.66 E-value=3.9e+02 Score=26.20 Aligned_cols=92 Identities=18% Similarity=0.196 Sum_probs=61.7
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc----ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW----EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~----~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
.++.++++. . +-.+|...+...+..+...+ ++..++++....+-..-. ...+++++..|+..+..
T Consensus 36 ~p~~~a~~~--~-------~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l 104 (560)
T PRK08974 36 YADQPAFIN--M-------GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQY--PIALFGILRAGMIVVNV 104 (560)
T ss_pred CCCCceEEE--C-------CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEecc
Confidence 456777653 1 13578888877766666543 577889988887665433 33578889999999977
Q ss_pred CC-CchhHHHHHHHhhCCCCCCCCCcceeEeecchHHH
Q 017382 244 PK-FSVRGIWQRWRESYPVNGNRAGEAITAFTGVPTMY 280 (372)
Q Consensus 244 ~~-~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~ 280 (372)
+. ..++.+... +++.++..+...+...
T Consensus 105 ~~~~~~~~~~~~----------l~~~~~~~ii~~~~~~ 132 (560)
T PRK08974 105 NPLYTPRELEHQ----------LNDSGAKAIVIVSNFA 132 (560)
T ss_pred CccCCHHHHHHH----------HHhcCceEEEEecccc
Confidence 65 455555555 6677778777655443
No 261
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.31 E-value=2.5e+02 Score=27.58 Aligned_cols=80 Identities=13% Similarity=0.087 Sum_probs=56.4
Q ss_pred eeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (372)
.+|...+...+..+...+ +++.+|++...++-+.-.- ..+++++..|+..+..+. +....+...
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~--~~~lA~~~~G~~~vpi~p~~~~~~l~~~---------- 116 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAV--IGYYGTLLAGGIVVQTNPLYTERELEYQ---------- 116 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH--HHHHHHHHcCeEEeccCcccCHHHHHHH----------
Confidence 588888877777666544 6778999998888766543 357888999988887754 455555554
Q ss_pred CCCcceeEeecchHHH
Q 017382 265 RAGEAITAFTGVPTMY 280 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~ 280 (372)
++..+++.++..+...
T Consensus 117 l~~~~~~~ii~~~~~~ 132 (563)
T PRK06710 117 LHDSGAKVILCLDLVF 132 (563)
T ss_pred HhccCCeEEEEeccch
Confidence 6677777777765443
No 262
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=30.31 E-value=3.7e+02 Score=23.48 Aligned_cols=60 Identities=13% Similarity=0.032 Sum_probs=40.3
Q ss_pred cCCCCCEEEEEcCCCHhHHHHHHHHHhh------C--ceeeeCCCCC---CHHHHHHHHhhCCceEEEecc
Q 017382 64 AGGCGARIGIVAKPSFEFVAGVLGTWFS------G--CIAVPLALSY---PESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 64 gv~~gd~V~l~~~n~~~~~~~~~A~~~~------G--~~~v~l~~~~---~~~~l~~~l~~~~~~~vi~~~ 123 (372)
-+.+|++|+|...-+.+..+++..+... | ..++.++... ..+.+..+.+..+..+.+.+.
T Consensus 25 li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v~~~ 95 (258)
T PRK10696 25 MIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHIEEQ 95 (258)
T ss_pred CCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEEEEe
Confidence 4678999999999999999888777543 2 3455555533 334445666666666666543
No 263
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=29.91 E-value=4.6e+02 Score=26.83 Aligned_cols=87 Identities=5% Similarity=-0.077 Sum_probs=61.3
Q ss_pred eeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC-CCchhHHHHHHHhhCCCC
Q 017382 187 GVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP-KFSVRGIWQRWRESYPVN 262 (372)
Q Consensus 187 ~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~~~~~~~~~ 262 (372)
...+|+..+...+..+...+ ++.++|++...++-+.-. +...++++..|+..+-.. ..+++.+...
T Consensus 119 ~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~i-------- 188 (700)
T PTZ00216 119 TRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEW--LASIYGIWSQSMVAATVYANLGEDALAYA-------- 188 (700)
T ss_pred ceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEeeCCCCCHHHHHhh--------
Confidence 46789999888777766544 788999998888765443 235778888888776554 4555555544
Q ss_pred CCCCCcceeEeecchHHHHHHHH
Q 017382 263 GNRAGEAITAFTGVPTMYTRLIQ 285 (372)
Q Consensus 263 ~~i~~~~~t~~~~~p~~~~~l~~ 285 (372)
++..++..+++....+..+.+
T Consensus 189 --l~~s~~~~lv~~~~~~~~l~~ 209 (700)
T PTZ00216 189 --LRETECKAIVCNGKNVPNLLR 209 (700)
T ss_pred --hhccCccEEEECHHHHHHHHH
Confidence 777888888887766655543
No 264
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=29.84 E-value=4.1e+02 Score=25.72 Aligned_cols=45 Identities=11% Similarity=0.039 Sum_probs=29.5
Q ss_pred eEEEecCchhHHHHH-HHHHHHHHcCceEEEcCCCc----hhHHHHHHHh
Q 017382 213 QFLHCLPLHHVHGLF-NALLAPLYAGATVEFMPKFS----VRGIWQRWRE 257 (372)
Q Consensus 213 ~~l~~~pl~~~~~~~-~~~~~~l~~G~~~~~~~~~~----~~~~~~~~~~ 257 (372)
+++...|+.+...+. ..+..+|..|.++++-|... ...+.+.+.+
T Consensus 139 Vv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~ 188 (478)
T cd07085 139 VVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQE 188 (478)
T ss_pred EEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHH
Confidence 677788877665442 24678899999999987643 3444444433
No 265
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.83 E-value=5.8e+02 Score=25.55 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=63.2
Q ss_pred CCCCcEEEEec--CCCCCCCceeeeehhhHHHHHHHHHhhcc--cCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEc
Q 017382 168 RGEDPALIVYT--SGTTGKPKGVVHTHKSIDAQVQMLTEAWE--YTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFM 243 (372)
Q Consensus 168 ~~~~~a~i~~T--SGtTG~pK~v~~s~~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~ 243 (372)
.++.++++... ++..|. ...+|...+...+..+...+. +.++|++...++-+.-+-. .+++++..|+..+..
T Consensus 34 ~~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~~~--~~lA~~~~G~v~vpl 109 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDYLI--AFFGALYAGRIAVPL 109 (631)
T ss_pred CCCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHHHH--HHHHHHHcCCEEEee
Confidence 45667765532 112221 245899888877766655442 5789999888877654433 578889999988765
Q ss_pred -CCCc---hhHHHHHHHhhCCCCCCCCCcceeEeecchHHHHHH
Q 017382 244 -PKFS---VRGIWQRWRESYPVNGNRAGEAITAFTGVPTMYTRL 283 (372)
Q Consensus 244 -~~~~---~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 283 (372)
+... .+.+... ++..++..++..+.....+
T Consensus 110 ~~~~~~~~~~~l~~~----------l~~~~~~~vi~~~~~~~~~ 143 (631)
T PRK07769 110 FDPAEPGHVGRLHAV----------LDDCTPSAILTTTDSAEGV 143 (631)
T ss_pred CCCCccchHHHHHHH----------HHhCCCCEEEEChHHHHHH
Confidence 2222 2333333 6677888887776655443
No 266
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=29.75 E-value=2.7e+02 Score=21.71 Aligned_cols=42 Identities=12% Similarity=0.108 Sum_probs=35.7
Q ss_pred HHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEecc
Q 017382 82 VAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (372)
.+....+-..|.-++-+..+.+++++...+.+.++++|..+.
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 344455567899999999999999999999999999999874
No 267
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=29.60 E-value=2.3e+02 Score=26.45 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=34.8
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCC-----CCHHHHHHHHhhCCceEEE
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVL 120 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi 120 (372)
+++++||.|.+..+ .|.....++...|+.++.++.+ ...+.+...+.. +.++|+
T Consensus 68 l~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 68 LGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred cCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 46889998876543 3444455667789888766532 356777776653 455665
No 268
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=29.07 E-value=2.6e+02 Score=26.01 Aligned_cols=55 Identities=18% Similarity=0.186 Sum_probs=35.9
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCC-----CCCHHHHHHHHhh---CCceEEE
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-----SYPESELLHVMHD---SDISMVL 120 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vi 120 (372)
+++++||.|.+-.+. +....-++...|+.++.++. ....+.+...+++ -+.++|+
T Consensus 64 l~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~ 126 (380)
T TIGR03588 64 LGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIV 126 (380)
T ss_pred cCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEE
Confidence 467899987776554 44445666778887776543 2467778877763 3456665
No 269
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=29.02 E-value=2.8e+02 Score=26.35 Aligned_cols=88 Identities=17% Similarity=0.012 Sum_probs=58.2
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++++|++. . ...+|+..+...+..+...+ ++.++|++....+-....-. .+++++..|+..+..+
T Consensus 16 ~~~~~a~~~--~-------~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~--~~la~~~~G~~~v~~~ 84 (458)
T PRK09029 16 RPQAIALRL--N-------DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLL--AYLALLQCGARVLPLN 84 (458)
T ss_pred CCCceeeec--C-------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHH--HHHHHHHcCCEEeecC
Confidence 456676652 1 23589999888777766544 67889999888777655433 4788899999999886
Q ss_pred CCc-hhHHHHHHHhhCCCCCCCCCcceeEeecc
Q 017382 245 KFS-VRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (372)
Q Consensus 245 ~~~-~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (372)
... ++.+-.. +++.++..++..
T Consensus 85 ~~~~~~~~~~~----------~~~~~~~~~i~~ 107 (458)
T PRK09029 85 PQLPQPLLEEL----------LPSLTLDFALVL 107 (458)
T ss_pred CCCCHHHHHHH----------HHhcCCCEEEEc
Confidence 544 4444333 455566555543
No 270
>PLN02565 cysteine synthase
Probab=28.46 E-value=4.6e+02 Score=23.91 Aligned_cols=60 Identities=10% Similarity=-0.074 Sum_probs=46.6
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc
Q 017382 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (372)
Q Consensus 65 v~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (372)
+.+|....+....+-.-+.+-+++..+|..+..+-|...+......++..+++++++++.
T Consensus 63 ~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 63 IKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred CCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 367866566666777777777888889997777666666677788999999999999863
No 271
>COG1110 Reverse gyrase [DNA replication, recombination, and repair]
Probab=28.41 E-value=5.2e+02 Score=27.91 Aligned_cols=38 Identities=16% Similarity=0.344 Sum_probs=26.8
Q ss_pred CCCcceeEeecchHHHHHHHHhhhhccHHHHHhhhhhccCceEEEecCCC
Q 017382 265 RAGEAITAFTGVPTMYTRLIQGYEAMDTELQAASASAAKQLRLMMCGSSA 314 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~l~~lr~v~~gG~~ 314 (372)
..+-.+.++.++.+.+..+++.++- ...+|+.++.|-|
T Consensus 379 F~~GeidvLVGvAsyYG~lVRGlDL------------P~rirYaIF~GvP 416 (1187)
T COG1110 379 FEEGEVDVLVGVASYYGVLVRGLDL------------PHRIRYAVFYGVP 416 (1187)
T ss_pred hccCceeEEEEecccccceeecCCc------------hhheeEEEEecCC
Confidence 3445688888888888888775331 2458888888877
No 272
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=28.15 E-value=98 Score=25.90 Aligned_cols=23 Identities=4% Similarity=0.134 Sum_probs=20.7
Q ss_pred CceeeHHHHHHHHHHHHHHHhhC
Q 017382 24 QKSYSYDQLASSALRISSLLCSN 46 (372)
Q Consensus 24 ~~~~Ty~el~~~~~~la~~L~~~ 46 (372)
...+||.++++.++.+|..+.+.
T Consensus 4 ~~~vSw~~I~~~~~~lA~kI~~s 26 (192)
T COG2236 4 KLYVSWEEIHRLCRALAEKIRAS 26 (192)
T ss_pred eEEecHHHHHHHHHHHHHHHHHc
Confidence 35689999999999999999985
No 273
>PRK12582 acyl-CoA synthetase; Provisional
Probab=28.11 E-value=2.8e+02 Score=27.86 Aligned_cols=94 Identities=15% Similarity=0.038 Sum_probs=59.6
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++++....+ .| ..-.+|+..+...+..+...+ +++++|++...++-+.-. +..+++++..|+..+..+
T Consensus 62 ~pd~~a~~~~~~~-~~--~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl~ 136 (624)
T PRK12582 62 APDRPWLAQREPG-HG--QWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEH--ALMTLAAMQAGVPAAPVS 136 (624)
T ss_pred CCCchheecccCC-CC--ceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH--HHHHHHHHHcCCeEeecc
Confidence 4566665543211 12 134689999888777766544 678999999988855433 235788899999988776
Q ss_pred C-Cch-----hHHHHHHHhhCCCCCCCCCcceeEeecc
Q 017382 245 K-FSV-----RGIWQRWRESYPVNGNRAGEAITAFTGV 276 (372)
Q Consensus 245 ~-~~~-----~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (372)
. ++. +.+... ++..++..++..
T Consensus 137 p~~~~~~~~~~~l~~~----------l~~~~~~~vi~~ 164 (624)
T PRK12582 137 PAYSLMSHDHAKLKHL----------FDLVKPRVVFAQ 164 (624)
T ss_pred CccccccCCHHHHHHH----------HHhcCCcEEEec
Confidence 4 332 444444 555666666554
No 274
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=28.10 E-value=75 Score=27.11 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=21.8
Q ss_pred HHHHhhCceeeeCCCCCCHHHHHHHHhhCC
Q 017382 86 LGTWFSGCIAVPLALSYPESELLHVMHDSD 115 (372)
Q Consensus 86 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 115 (372)
=++..+|+.+++|++..+.+++..+++..+
T Consensus 31 ~~i~~aG~~pv~ip~~~~~~~~~~~l~~id 60 (217)
T PF07722_consen 31 KAIEAAGGRPVPIPYDADDEELDELLDRID 60 (217)
T ss_dssp HHHHHTT-EEEEE-SS--HHHHHHHHHCSS
T ss_pred HHHHHcCCEEEEEccCCCHHHHHHHHhhcC
Confidence 356788999999999999999999998653
No 275
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=27.91 E-value=3.5e+02 Score=26.19 Aligned_cols=34 Identities=21% Similarity=0.250 Sum_probs=25.6
Q ss_pred eEEEecCchhHHHHHH-HHHHHHHcCceEEEcCCC
Q 017382 213 QFLHCLPLHHVHGLFN-ALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 213 ~~l~~~pl~~~~~~~~-~~~~~l~~G~~~~~~~~~ 246 (372)
+++...|+.+...+.. .+..+|.+|.++++-|..
T Consensus 138 Vv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~ 172 (478)
T cd07131 138 VVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAE 172 (478)
T ss_pred EEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 7788888887665433 457789999999998763
No 276
>PRK07867 acyl-CoA synthetase; Validated
Probab=27.35 E-value=5.9e+02 Score=24.82 Aligned_cols=93 Identities=10% Similarity=-0.005 Sum_probs=57.7
Q ss_pred CCCceEEEe---------CCceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhH--H
Q 017382 14 ARDSVAIRA---------DQKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEF--V 82 (372)
Q Consensus 14 ~~~~~al~~---------~~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~--~ 82 (372)
.++.++++. .+..+|++.+...+..+... .++..+|++...+|-...+ +
T Consensus 150 ~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~--------------------~~~~~~d~~l~~~pl~~~~~~~ 209 (529)
T PRK07867 150 DPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQR--------------------FGLGPDDVCYVSMPLFHSNAVM 209 (529)
T ss_pred CccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHh--------------------hCCCcccEEEEecchhHHHHHH
Confidence 446666653 13468888886555544332 3778889888776654322 2
Q ss_pred HHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHH
Q 017382 83 AGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYRE 127 (372)
Q Consensus 83 ~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (372)
..++..+..|+..+.. +..+++.+...+++.++.++........
T Consensus 210 ~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~vt~~~~~p~~~~ 253 (529)
T PRK07867 210 AGWAVALAAGASIALR-RKFSASGFLPDVRRYGATYANYVGKPLS 253 (529)
T ss_pred HHHHHHHhcCceEEec-CCCCHHHHHHHHHHhCCeEEeccHHHHH
Confidence 2234445556655443 4567888888899999998876654433
No 277
>PRK07476 eutB threonine dehydratase; Provisional
Probab=27.26 E-value=4.8e+02 Score=23.71 Aligned_cols=54 Identities=7% Similarity=-0.077 Sum_probs=39.7
Q ss_pred EEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchH
Q 017382 73 IVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYR 126 (372)
Q Consensus 73 l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 126 (372)
+....+-.-..+-+++...|..+..+-|...+......++..++.+++++....
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~ 124 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQD 124 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 444556677777888889998766655555555567788999999999986543
No 278
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=27.19 E-value=2.6e+02 Score=24.85 Aligned_cols=56 Identities=21% Similarity=0.262 Sum_probs=33.7
Q ss_pred cCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCC----------CCCHHHHHHHHhh-CCceEEEec
Q 017382 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL----------SYPESELLHVMHD-SDISMVLST 122 (372)
Q Consensus 64 gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~----------~~~~~~l~~~l~~-~~~~~vi~~ 122 (372)
-+++||.|.+.-+ +. ....-++...|+.++.+++ ..+.+++...+++ .++++++..
T Consensus 95 l~~~gd~Vlv~~~-~h--~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 95 VCGPGDKILIDRN-CH--KSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred cCCCCCEEEEeCC-ch--HHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 3578888776643 33 3334455667877766644 2457778777764 456655543
No 279
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=26.90 E-value=2.7e+02 Score=20.73 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=30.8
Q ss_pred HHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEecc
Q 017382 88 TWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 88 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (372)
+-..|.-++-+.+..+.+++...+.+.++++|..+.
T Consensus 23 l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 23 LRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 334688888999999999999999999999988764
No 280
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=26.87 E-value=1.8e+02 Score=28.11 Aligned_cols=60 Identities=13% Similarity=0.053 Sum_probs=38.3
Q ss_pred cCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCC-CCCHHHHHHHHhhCCceEEEeccc
Q 017382 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL-SYPESELLHVMHDSDISMVLSTED 124 (372)
Q Consensus 64 gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~vi~~~~ 124 (372)
-+.+||.|++=-| ++..+...+-...+..+.+|++. ...++.+...++.-+++++.+.+.
T Consensus 175 l~~pGd~v~vE~P-tY~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 175 LLDPGDTVLVEDP-TYPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred hCCCCCEEEEcCC-CcHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 3457888876555 44444444444444444444432 557888999998889999998764
No 281
>PRK10719 eutA reactivating factor for ethanolamine ammonia lyase; Provisional
Probab=26.75 E-value=5.1e+02 Score=25.16 Aligned_cols=53 Identities=17% Similarity=0.119 Sum_probs=41.0
Q ss_pred CceEEEeC-CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHH
Q 017382 16 DSVAIRAD-QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVL 86 (372)
Q Consensus 16 ~~~al~~~-~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~ 86 (372)
+..|+-.. ....+|+++.+.++.++..+.. .++++....+++++..--++-..
T Consensus 374 ~~~alal~g~~~~~y~~iq~la~~i~~~~~~------------------~~~~~~Pliiv~e~D~aK~LGq~ 427 (475)
T PRK10719 374 DAYALALPGSLPPSYAAIQTLAKALVDGVAR------------------FPNKPHPLIVVAEQDMGKALGQL 427 (475)
T ss_pred CcEEEEcCCCCCCCHHHHHHHHHHHHHHHHh------------------hccCCCCEEEEEcccHHHHHHHH
Confidence 44566555 5789999999999999999988 56667888888888866555443
No 282
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=26.34 E-value=2.5e+02 Score=26.89 Aligned_cols=55 Identities=18% Similarity=0.102 Sum_probs=35.9
Q ss_pred cCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCC-----CCHHHHHHHHhhCCceEEEec
Q 017382 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS-----YPESELLHVMHDSDISMVLST 122 (372)
Q Consensus 64 gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 122 (372)
++++||.|++-.+. |.....++...|+.+++++.+ ...+.+...+.. +.++|+..
T Consensus 107 ~~~pGd~VIv~~~t---~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAG---FPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 78899998866543 455556777789887766542 356667776643 45555553
No 283
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=26.11 E-value=4.6e+02 Score=23.32 Aligned_cols=58 Identities=10% Similarity=-0.009 Sum_probs=42.5
Q ss_pred CCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccch
Q 017382 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDY 125 (372)
Q Consensus 67 ~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (372)
+|+.|. ....+-.-..+-+++.++|..+..+-|...+......++..++++++++...
T Consensus 52 ~~~~vv-~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 52 PGTTII-EPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred CCCEEE-EeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 456554 4666777777778888899877666555544556778899999999998754
No 284
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=25.95 E-value=4.5e+02 Score=23.41 Aligned_cols=70 Identities=9% Similarity=0.220 Sum_probs=41.5
Q ss_pred CCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHH---HHHHHhhCCceEEEeccchH-HHHHHHHhhcC
Q 017382 68 GARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESE---LLHVMHDSDISMVLSTEDYR-EVLQNVASKSG 137 (372)
Q Consensus 68 gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~ 137 (372)
.++..+...+...++.-.+++-..+..-.--....++.+ +...+++.+.++||+.+... +.++.+....+
T Consensus 178 ~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g 251 (286)
T cd01019 178 KTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTG 251 (286)
T ss_pred CCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcC
Confidence 355677777788888877766544422111122334554 45556688999999987543 34444444443
No 285
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=25.56 E-value=3.9e+02 Score=25.60 Aligned_cols=34 Identities=21% Similarity=0.126 Sum_probs=23.1
Q ss_pred eEEEecCchhHHHH-HHHHHHHHHcCceEEEcCCC
Q 017382 213 QFLHCLPLHHVHGL-FNALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 213 ~~l~~~pl~~~~~~-~~~~~~~l~~G~~~~~~~~~ 246 (372)
+++...|+++.... +..+..+|.+|.++++-|..
T Consensus 121 vv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~ 155 (450)
T cd07092 121 VVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSE 155 (450)
T ss_pred eEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 56667777665443 23466789999999988754
No 286
>PRK11761 cysM cysteine synthase B; Provisional
Probab=25.32 E-value=5e+02 Score=23.29 Aligned_cols=58 Identities=12% Similarity=-0.043 Sum_probs=43.0
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEecc
Q 017382 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 65 v~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (372)
+++|+.|.. ...+-.-..+-+++...|..+..+-|...+.+....++..++++++++.
T Consensus 60 ~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 60 IKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred CCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 466776544 5556667777778888998776665655556678889999999999986
No 287
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=25.18 E-value=3.4e+02 Score=25.97 Aligned_cols=76 Identities=8% Similarity=-0.040 Sum_probs=50.5
Q ss_pred eeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCCC-chhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPKF-SVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 264 (372)
.+|+..+...+......+ ++..++++....+-+... ...+++++..|+..+..+.. +.+.+...
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~--~~~~~a~~~~G~~~~~~~~~~~~~~~~~~---------- 94 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEM--LATFLGAVKAGHAYIPVDVSSPAERIEMI---------- 94 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEecCCCCChHHHHHHH----------
Confidence 489999887776665544 567789998888765443 23578889999988877654 44444444
Q ss_pred CCCcceeEeecc
Q 017382 265 RAGEAITAFTGV 276 (372)
Q Consensus 265 i~~~~~t~~~~~ 276 (372)
++..++..++..
T Consensus 95 ~~~~~~~~~~~~ 106 (503)
T PRK04813 95 IEVAKPSLIIAT 106 (503)
T ss_pred HHhcCCCEEEec
Confidence 445555555543
No 288
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=25.16 E-value=5.4e+02 Score=23.67 Aligned_cols=34 Identities=24% Similarity=0.046 Sum_probs=23.8
Q ss_pred eEEEecCchhHHH-HHHHHHHHHHcCceEEEcCCC
Q 017382 213 QFLHCLPLHHVHG-LFNALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 213 ~~l~~~pl~~~~~-~~~~~~~~l~~G~~~~~~~~~ 246 (372)
++++..|..+... .+..++.+|..|.++++-+..
T Consensus 95 vv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~ 129 (367)
T cd06534 95 VVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSE 129 (367)
T ss_pred EEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 4566667666543 334577889999998888764
No 289
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.13 E-value=6.4e+02 Score=24.52 Aligned_cols=94 Identities=9% Similarity=-0.090 Sum_probs=59.1
Q ss_pred CCCceEEEeC---------CceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCC-CEEEEEcCCC--HhH
Q 017382 14 ARDSVAIRAD---------QKSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCG-ARIGIVAKPS--FEF 81 (372)
Q Consensus 14 ~~~~~al~~~---------~~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~g-d~V~l~~~n~--~~~ 81 (372)
.++.++++.- +..+|++.+...+...... .++.++ |++...+|.. ..+
T Consensus 150 ~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~--------------------~~~~~~~d~~~~~~p~~~~~g~ 209 (545)
T PRK07768 150 GEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVA--------------------AEFDVETDVMVSWLPLFHDMGM 209 (545)
T ss_pred CCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHh--------------------cCCCCCCceeEEeCCCccchHH
Confidence 3566666641 2468888886654433322 256665 7877776654 334
Q ss_pred HHHHHHHHhhCceeeeCCCCC---CHHHHHHHHhhCCceEEEeccchHH
Q 017382 82 VAGVLGTWFSGCIAVPLALSY---PESELLHVMHDSDISMVLSTEDYRE 127 (372)
Q Consensus 82 ~~~~~A~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~~vi~~~~~~~ 127 (372)
+..+++.+..|+..+.+.+.. .+.....++++.++.++.+......
T Consensus 210 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 258 (545)
T PRK07768 210 VGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYA 258 (545)
T ss_pred HHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHH
Confidence 444566778888877765431 4556778899999998766544433
No 290
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.05 E-value=4.2e+02 Score=25.89 Aligned_cols=81 Identities=15% Similarity=0.062 Sum_probs=55.9
Q ss_pred eeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (372)
.+|+..+...+..+...+ ++..++++..+.+-.-.. +..+++.+..|+..+.... .....+...
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~--~~~~~a~~~~G~~~vpl~~~~~~~~~~~~---------- 109 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF--VESVLAANMLGAIAVPVNFRLTPPEIAFL---------- 109 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEEcCccCCHHHHHHH----------
Confidence 688888877766655444 678899988887755443 3357888999999887764 455555555
Q ss_pred CCCcceeEeecchHHHH
Q 017382 265 RAGEAITAFTGVPTMYT 281 (372)
Q Consensus 265 i~~~~~t~~~~~p~~~~ 281 (372)
+++.++..++..+....
T Consensus 110 l~~~~~~~ii~~~~~~~ 126 (542)
T PRK07786 110 VSDCGAHVVVTEAALAP 126 (542)
T ss_pred HHhCCCcEEEEccchHH
Confidence 56667777766665443
No 291
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=25.05 E-value=3.5e+02 Score=25.75 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=45.9
Q ss_pred CCCEEEEEcCCCHhHHHHHHHHHhhCceeeeC--CCCCCHHHHHHHHhhCCceEEE
Q 017382 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPL--ALSYPESELLHVMHDSDISMVL 120 (372)
Q Consensus 67 ~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~vi 120 (372)
.|-+|+.++.-..+-......+..+|+-+... ||....+++...|...+..+.-
T Consensus 31 ~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a 86 (406)
T TIGR00936 31 KGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFA 86 (406)
T ss_pred CCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEE
Confidence 48899999999999999999999999977655 7777888888888888888664
No 292
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=24.96 E-value=1.3e+02 Score=26.81 Aligned_cols=54 Identities=9% Similarity=0.008 Sum_probs=41.7
Q ss_pred eeeHHHHHHH-----HHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceee
Q 017382 26 SYSYDQLASS-----ALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAV 96 (372)
Q Consensus 26 ~~Ty~el~~~-----~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v 96 (372)
.+.|.++.+. ...+...|.+ .|+.+++.|.++|.++...-.+++++..+|..-+
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~-----------------~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~~v 259 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFG-----------------RGVSFDRPIIASCGSGVTAAVVVLALATLDVPNV 259 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHh-----------------cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCCCc
Confidence 5667776531 3556666666 4899999999999999999999999998998533
No 293
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=24.73 E-value=6.2e+02 Score=24.58 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=41.0
Q ss_pred CCceEEEeCC-ceeeHHHHHHHHHHHHHHHhhCCCCcccccccccccccccCCCCCEEEEEcCCCHhHHHHH
Q 017382 15 RDSVAIRADQ-KSYSYDQLASSALRISSLLCSNDLKTTSEKTKNENSAVLAGGCGARIGIVAKPSFEFVAGV 85 (372)
Q Consensus 15 ~~~~al~~~~-~~~Ty~el~~~~~~la~~L~~~~~~~~~~~~~~~~~~~~gv~~gd~V~l~~~n~~~~~~~~ 85 (372)
-+..|+-..+ ...+|+++.+.++.++..+.+ ..+++..+.+++++..--++-.
T Consensus 372 ~~~~Alal~g~~~~~f~~iq~lA~~i~~~~~~------------------~~~~~~Plivv~e~D~aKvLGq 425 (473)
T PF06277_consen 372 DQPVALALPGKPNPSFAEIQELAEAIAEGMAE------------------LINPDQPLIVVVEQDMAKVLGQ 425 (473)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHh------------------hccCCCCEEEEECchHHHHHHH
Confidence 4456666654 589999999999999999987 5777888888888876555443
No 294
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.41 E-value=5e+02 Score=23.86 Aligned_cols=69 Identities=12% Similarity=0.152 Sum_probs=52.8
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHHHHHHHh
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREVLQNVAS 134 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 134 (372)
.|+++|.+|+|..--+.-++...+|-+ .|.-+..++...+ .-++.++.++++..+...+..+..+++..
T Consensus 177 ~g~~pG~~vgI~GlGGLGh~aVq~AKA-MG~rV~vis~~~~--kkeea~~~LGAd~fv~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 177 SGLGPGKWVGIVGLGGLGHMAVQYAKA-MGMRVTVISTSSK--KKEEAIKSLGADVFVDSTEDPDIMKAIMK 245 (360)
T ss_pred cCCCCCcEEEEecCcccchHHHHHHHH-hCcEEEEEeCCch--hHHHHHHhcCcceeEEecCCHHHHHHHHH
Confidence 488999999999999999998888865 4777788876642 33567888999999887765665555543
No 295
>PRK09192 acyl-CoA synthetase; Validated
Probab=24.36 E-value=5.1e+02 Score=25.56 Aligned_cols=85 Identities=12% Similarity=0.040 Sum_probs=58.2
Q ss_pred eeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-Cc-------hhHHHHHHH
Q 017382 188 VVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FS-------VRGIWQRWR 256 (372)
Q Consensus 188 v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~-------~~~~~~~~~ 256 (372)
-.+|...+...+..+...+ +++++|++..+++-+--.-. .+++++..|+..+..+. ++ .+.+...
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~--~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~-- 123 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVE--AFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGM-- 123 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHH--HHHHHHHcCCeeEeccCCcccccchHHHHHHHHH--
Confidence 5688888877666665544 78899999998888655433 47888999999888743 11 3444444
Q ss_pred hhCCCCCCCCCcceeEeecchHHHHHHH
Q 017382 257 ESYPVNGNRAGEAITAFTGVPTMYTRLI 284 (372)
Q Consensus 257 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 284 (372)
+++.++..++........+.
T Consensus 124 --------i~~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 124 --------LASAQPAAIITPDELLPWVN 143 (579)
T ss_pred --------HHhcCCCEEEeChHHHHHHH
Confidence 66778888777665544443
No 296
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=24.31 E-value=6.1e+02 Score=23.99 Aligned_cols=56 Identities=11% Similarity=0.010 Sum_probs=37.0
Q ss_pred CCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCC-HHHHHHHHhhCCceEEEecc
Q 017382 67 CGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYP-ESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 67 ~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~-~~~l~~~l~~~~~~~vi~~~ 123 (372)
.|.+|+++......+-++-+-.- +|..++.+..... .+.....++.......|.++
T Consensus 273 ~Gkrv~i~gd~~~~~~l~~~L~e-lGm~~v~~~t~~~~~~~~~~~~~~l~~~~~v~~~ 329 (407)
T TIGR01279 273 RGKKIFFFGDNLLELPLARFLKR-CGMEVVECGTPYIHRRFHAAELALLEGGVRIVEQ 329 (407)
T ss_pred CCCEEEEECCchHHHHHHHHHHH-CCCEEEEecCCCCChHHHHHHHhhcCCCCeEEeC
Confidence 58999999988776666666555 8998887776554 33335555655554444443
No 297
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=24.27 E-value=3.7e+02 Score=26.87 Aligned_cols=93 Identities=14% Similarity=0.006 Sum_probs=61.5
Q ss_pred CCCCcEEEEecCCCCCCCceeeeehhhHHHHHHHHHhhc---ccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcC
Q 017382 168 RGEDPALIVYTSGTTGKPKGVVHTHKSIDAQVQMLTEAW---EYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMP 244 (372)
Q Consensus 168 ~~~~~a~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~ 244 (372)
.++.++++... ..| ....+|...+...+..+...+ ++.++|++...++-+.-.-. .+++++..|+.++..+
T Consensus 52 ~p~~~a~~~~~--~~~--~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~--~~lA~~~~Gav~vpl~ 125 (614)
T PRK08180 52 APDRVFLAERG--ADG--GWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHAL--LALAAMYAGVPYAPVS 125 (614)
T ss_pred CCCCceeeecc--CCC--ceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHH--HHHHHHHcCCeEeeec
Confidence 45677765431 112 134689999888777766544 67899999988877655433 5788899999998876
Q ss_pred CC-c-----hhHHHHHHHhhCCCCCCCCCcceeEeecc
Q 017382 245 KF-S-----VRGIWQRWRESYPVNGNRAGEAITAFTGV 276 (372)
Q Consensus 245 ~~-~-----~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 276 (372)
.. . +..+... ++..++..++..
T Consensus 126 ~~~~~~~~~~~~l~~~----------l~~~~~~~li~~ 153 (614)
T PRK08180 126 PAYSLVSQDFGKLRHV----------LELLTPGLVFAD 153 (614)
T ss_pred cccccccCCHHHHHHH----------HhcCCCcEEEEc
Confidence 53 3 3444444 556666766654
No 298
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=24.26 E-value=2.1e+02 Score=23.82 Aligned_cols=21 Identities=5% Similarity=0.259 Sum_probs=19.5
Q ss_pred ceeeHHHHHHHHHHHHHHHhh
Q 017382 25 KSYSYDQLASSALRISSLLCS 45 (372)
Q Consensus 25 ~~~Ty~el~~~~~~la~~L~~ 45 (372)
.-+||.|+.+++.++|..+.+
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~ 30 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIAS 30 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHH
Confidence 468999999999999999988
No 299
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=24.11 E-value=2.5e+02 Score=28.87 Aligned_cols=59 Identities=8% Similarity=0.234 Sum_probs=43.0
Q ss_pred cCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCC---------C-----HHHHHHHHhhC-Cce----EEEeccc
Q 017382 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSY---------P-----ESELLHVMHDS-DIS----MVLSTED 124 (372)
Q Consensus 64 gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~vi~~~~ 124 (372)
-+++||.|+ +-.|+--.+.. |+...|+.++-+.|.. + ++.++..+++. +++ ++|+.+.
T Consensus 231 ~~~~Gd~VL-vdRN~HKSv~h--aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pT 307 (714)
T PRK15400 231 SAPAGSTVL-IDRNCHKSLTH--LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNST 307 (714)
T ss_pred hcCCCCEEE-eecccHHHHHH--HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCC
Confidence 567899554 78888888665 9999999999887764 3 67777777654 233 7777764
Q ss_pred h
Q 017382 125 Y 125 (372)
Q Consensus 125 ~ 125 (372)
+
T Consensus 308 Y 308 (714)
T PRK15400 308 Y 308 (714)
T ss_pred C
Confidence 3
No 300
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=23.56 E-value=3.3e+02 Score=20.56 Aligned_cols=38 Identities=11% Similarity=0.102 Sum_probs=32.6
Q ss_pred HHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEecc
Q 017382 86 LGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTE 123 (372)
Q Consensus 86 ~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 123 (372)
...-..|.-++-+.+..+.+++.....+.++++|..+.
T Consensus 21 ~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~ 58 (122)
T cd02071 21 RALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSS 58 (122)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcc
Confidence 33455688999999999999999999999999999774
No 301
>PRK13265 glycine/sarcosine/betaine reductase complex protein A; Reviewed
Probab=23.39 E-value=1.5e+02 Score=23.16 Aligned_cols=65 Identities=18% Similarity=0.151 Sum_probs=36.1
Q ss_pred ccCceE-EEecCCCCCHHHHHHHHH---HhC-CccccccccccccccccCCCCCCCCCCcccccCCCceE
Q 017382 302 AKQLRL-MMCGSSALPLPVMQQWET---ITG-HRLLERYGMTEFVMAISNPLRGARKAGTVGNPLPGVQV 366 (372)
Q Consensus 302 l~~lr~-v~~gG~~~~~~~~~~~~~---~~~-~~l~~~YG~tE~~~~~~~~~~~~~~~~svG~p~~g~~i 366 (372)
+++-.+ +......++.+-.++.++ .+| ..++-..|.+|+-........-.....+.--|+.|+++
T Consensus 36 fs~TECfVctaAGAMDLEnQ~Rvk~~aEk~g~eNvvVllGaaeaEaaglaAETVt~GDPTfAGPLAGV~L 105 (154)
T PRK13265 36 FSSTECFVUTAAGAMDLENQKRVKDLAEKFGAENVVVILGAAEAEAAGLAAETVTNGDPTFAGPLAGVQL 105 (154)
T ss_pred EEeeeEEEeecccccchHHHHHHHHHHHhcCCccEEEEecccchhhccceeeeeccCCCcccccccCCcc
Confidence 445555 555677777766666654 344 46788888888643322111111222334567788774
No 302
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=23.23 E-value=2.5e+02 Score=22.73 Aligned_cols=19 Identities=5% Similarity=0.160 Sum_probs=18.2
Q ss_pred eeHHHHHHHHHHHHHHHhh
Q 017382 27 YSYDQLASSALRISSLLCS 45 (372)
Q Consensus 27 ~Ty~el~~~~~~la~~L~~ 45 (372)
+||.|+.+.+.++|..+.+
T Consensus 3 is~~~i~~~i~~lA~~I~~ 21 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITE 21 (166)
T ss_pred cCHHHHHHHHHHHHHHHHH
Confidence 7999999999999999987
No 303
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=23.14 E-value=5.7e+02 Score=23.17 Aligned_cols=70 Identities=11% Similarity=0.198 Sum_probs=43.3
Q ss_pred CEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCC--CCHHH---HHHHHhhCCceEEEeccchHH-HHHHHHhhcCCcc
Q 017382 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALS--YPESE---LLHVMHDSDISMVLSTEDYRE-VLQNVASKSGAKF 140 (372)
Q Consensus 69 d~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~--~~~~~---l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~ 140 (372)
++..+...+...++.-.+++-..|..- +.+. -++.+ +...+++.++++||+.+.... .++.+..+.+.++
T Consensus 203 ~~~~i~~H~af~Yf~~~ygl~~~~~~~--~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~la~e~g~~v 278 (311)
T PRK09545 203 GKGYFVFHDAYGYFEKHYGLTPLGHFT--VNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVIESVAKGTSVRM 278 (311)
T ss_pred CCcEEEECchHHHHHHhCCCceeeeec--cCCCCCCCHHHHHHHHHHHHHcCCCEEEecCCCChHHHHHHHHhcCCeE
Confidence 445666777888888888777666432 3332 24555 455566789999999876533 3444444444443
No 304
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=23.11 E-value=4.7e+02 Score=25.12 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=24.9
Q ss_pred eEEEecCchhHHHHH-HHHHHHHHcCceEEEcCCC
Q 017382 213 QFLHCLPLHHVHGLF-NALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 213 ~~l~~~pl~~~~~~~-~~~~~~l~~G~~~~~~~~~ 246 (372)
+++...|+.+...+. ..+..+|..|.++++-|..
T Consensus 120 Vv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~ 154 (454)
T cd07109 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAE 154 (454)
T ss_pred EEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 677788887764442 3466889999999998864
No 305
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=22.32 E-value=3.9e+02 Score=20.99 Aligned_cols=71 Identities=14% Similarity=0.079 Sum_probs=43.1
Q ss_pred CCCCCEEE-EEcCCCHhH-HHHHHHHHhhCceeeeCCCCC-------CHHHHHHHHhhCCceEEEeccchHHHHHHHHhh
Q 017382 65 GGCGARIG-IVAKPSFEF-VAGVLGTWFSGCIAVPLALSY-------PESELLHVMHDSDISMVLSTEDYREVLQNVASK 135 (372)
Q Consensus 65 v~~gd~V~-l~~~n~~~~-~~~~~A~~~~G~~~v~l~~~~-------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~ 135 (372)
.-.|..|+ ++..+|..- ...-.|+.++|+.++-+++.. +..+...++... +++++.-......+.+....
T Consensus 36 ~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~-~D~iv~R~~~~~~~~~~a~~ 114 (142)
T PF02729_consen 36 LLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY-VDAIVIRHPSHGALEELAEH 114 (142)
T ss_dssp TTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-CSEEEEEESSHHHHHHHHHH
T ss_pred cCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-hheEEEEeccchHHHHHHHh
Confidence 34455554 556666544 444567899999999887543 355667788888 66666654444555555443
Q ss_pred c
Q 017382 136 S 136 (372)
Q Consensus 136 ~ 136 (372)
.
T Consensus 115 ~ 115 (142)
T PF02729_consen 115 S 115 (142)
T ss_dssp C
T ss_pred c
Confidence 3
No 306
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=22.26 E-value=5.7e+02 Score=24.49 Aligned_cols=35 Identities=26% Similarity=0.240 Sum_probs=23.7
Q ss_pred CeEEEecCchhHHHH-HHHHHHHHHcCceEEEcCCC
Q 017382 212 DQFLHCLPLHHVHGL-FNALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 212 d~~l~~~pl~~~~~~-~~~~~~~l~~G~~~~~~~~~ 246 (372)
-+++...|+.+.... ...+..+|..|.++++-|..
T Consensus 110 Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~ 145 (436)
T cd07135 110 GVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSE 145 (436)
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCc
Confidence 356667777665432 23466789999999988754
No 307
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=22.19 E-value=4.8e+02 Score=25.42 Aligned_cols=77 Identities=16% Similarity=0.122 Sum_probs=53.6
Q ss_pred eeehhhHHHHHHHHHhh---cccCCCCeEEEecCchhHHHHHHHHHHHHHcCceEEEcCC-CchhHHHHHHHhhCCCCCC
Q 017382 189 VHTHKSIDAQVQMLTEA---WEYTSADQFLHCLPLHHVHGLFNALLAPLYAGATVEFMPK-FSVRGIWQRWRESYPVNGN 264 (372)
Q Consensus 189 ~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (372)
.+|...+...+..+... .++.++|++...++-+.-.-. .+++++..|+.++..+. .....+...
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~--~~la~~~~G~~~v~l~~~~~~~~l~~~---------- 113 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPI--NFFGALKAGARVVHLSPLDGERALSHK---------- 113 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHH--HHHHHHhcCeEEEecCCCCCHHHHHHH----------
Confidence 58888887666665543 368899999988886554433 47788889999887765 455555555
Q ss_pred CCCcceeEeecch
Q 017382 265 RAGEAITAFTGVP 277 (372)
Q Consensus 265 i~~~~~t~~~~~p 277 (372)
++..++..++...
T Consensus 114 i~~~~~~~vi~~~ 126 (541)
T TIGR03205 114 LSDSGARLLITSD 126 (541)
T ss_pred HhhcCceEEEEeC
Confidence 6677777776543
No 308
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=21.56 E-value=3.3e+02 Score=24.94 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=24.4
Q ss_pred CCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCC----CCCHHHHHHHHhhCCceEEE
Q 017382 66 GCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLAL----SYPESELLHVMHDSDISMVL 120 (372)
Q Consensus 66 ~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~----~~~~~~l~~~l~~~~~~~vi 120 (372)
++||.|++-.|.-. ....++...|+.+++++. ....+++...+...+.++++
T Consensus 103 ~~gd~vlv~~P~y~---~~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~ 158 (356)
T PRK04870 103 KPGATVLAPEPGFV---MYRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVF 158 (356)
T ss_pred CCCCEEEECCCCHH---HHHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEE
Confidence 55666665544322 223344455655554432 22345555555444445444
No 309
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=21.50 E-value=2.1e+02 Score=21.09 Aligned_cols=32 Identities=9% Similarity=-0.066 Sum_probs=26.5
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHHHHhhCce
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLGTWFSGCI 94 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~ 94 (372)
.|+.+++.|.+++..+.....+.+.+..+|..
T Consensus 73 ~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 73 LGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred cCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 47888999999999988877777778888863
No 310
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=21.45 E-value=6.5e+02 Score=23.25 Aligned_cols=61 Identities=8% Similarity=-0.068 Sum_probs=51.0
Q ss_pred cCCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc
Q 017382 64 AGGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (372)
Q Consensus 64 gv~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (372)
-+.+|..+++-...+---+..-+.|..-|..++.+=|..=..|-..+|+..++.+|.++.+
T Consensus 99 ~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 99 LITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 5788988998888888888888889999998887766655566788899999999999964
No 311
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=21.43 E-value=5.4e+02 Score=24.93 Aligned_cols=35 Identities=20% Similarity=0.120 Sum_probs=24.8
Q ss_pred CeEEEecCchhHHHHH-HHHHHHHHcCceEEEcCCC
Q 017382 212 DQFLHCLPLHHVHGLF-NALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 212 d~~l~~~pl~~~~~~~-~~~~~~l~~G~~~~~~~~~ 246 (372)
-+++...|+.+...+. ..+..+|.+|.++++-|..
T Consensus 138 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~ 173 (479)
T cd07116 138 GVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAE 173 (479)
T ss_pred ceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 3667777777665543 2466789999999988764
No 312
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=21.25 E-value=7e+02 Score=23.55 Aligned_cols=45 Identities=20% Similarity=0.015 Sum_probs=27.6
Q ss_pred eEEEecCchhHH-HHHHHHHHHHHcCceEEEcCCC----chhHHHHHHHh
Q 017382 213 QFLHCLPLHHVH-GLFNALLAPLYAGATVEFMPKF----SVRGIWQRWRE 257 (372)
Q Consensus 213 ~~l~~~pl~~~~-~~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~~~~ 257 (372)
++++..|..+.. ..+..+..+|..|.++++.+.. .+..+.+.+.+
T Consensus 99 vv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ 148 (432)
T cd07078 99 VVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAE 148 (432)
T ss_pred eEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 566666766553 2334567889999988887653 23445555444
No 313
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=21.18 E-value=1.4e+02 Score=20.31 Aligned_cols=28 Identities=11% Similarity=0.053 Sum_probs=23.3
Q ss_pred CCceeeHHHHHHHHHHHHHHHhhCCCCc
Q 017382 23 DQKSYSYDQLASSALRISSLLCSNDLKT 50 (372)
Q Consensus 23 ~~~~~Ty~el~~~~~~la~~L~~~~~~~ 50 (372)
.++.+|.+++.+.++++.+.++++|.-.
T Consensus 27 ~g~~l~~~~l~~~~~~l~~~y~~~GY~~ 54 (76)
T PF08479_consen 27 IGRCLTLADLQQLADALTNYYREKGYIT 54 (76)
T ss_dssp TTSBB-HHHHHHHHHHHHHHHHHTT-TT
T ss_pred cCCCcCHHHHHHHHHHHHHHHHHcCceE
Confidence 4789999999999999999999986643
No 314
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=21.15 E-value=75 Score=23.16 Aligned_cols=14 Identities=29% Similarity=0.648 Sum_probs=12.9
Q ss_pred ccccCCCceEEEee
Q 017382 357 VGNPLPGVQVSMIL 370 (372)
Q Consensus 357 vG~p~~g~~i~Ivd 370 (372)
-|+|++|++++|.|
T Consensus 24 tg~Pv~ga~V~l~~ 37 (97)
T PF11974_consen 24 TGKPVAGAEVELYD 37 (97)
T ss_pred CCCccCCCEEEEEE
Confidence 49999999999987
No 315
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=21.14 E-value=6e+02 Score=22.68 Aligned_cols=59 Identities=12% Similarity=-0.013 Sum_probs=42.4
Q ss_pred CCCCCEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccc
Q 017382 65 GGCGARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTED 124 (372)
Q Consensus 65 v~~gd~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 124 (372)
+.+|+.| +....+-.-..+-+++.++|..+..+-|...+......++..++.+++++..
T Consensus 54 ~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 54 LKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGA 112 (298)
T ss_pred CCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCC
Confidence 3667766 5555566666677777889987766655544445577899999999999875
No 316
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=20.99 E-value=5.3e+02 Score=24.73 Aligned_cols=56 Identities=9% Similarity=0.089 Sum_probs=31.7
Q ss_pred CCCCCEEEEEcCCCHhHHHHHH--HHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEec
Q 017382 65 GGCGARIGIVAKPSFEFVAGVL--GTWFSGCIAVPLALSYPESELLHVMHDSDISMVLST 122 (372)
Q Consensus 65 v~~gd~V~l~~~n~~~~~~~~~--A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~ 122 (372)
+++||.|++. ++.+.....++ .+.+.|+.+..++....+++++..++. +.++|+..
T Consensus 97 l~~GD~VI~~-~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~-~Tk~I~~e 154 (432)
T PRK06702 97 CSSGDHLLCS-STVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALAND-KTKLVYAE 154 (432)
T ss_pred cCCCCEEEEC-CCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCc-CCeEEEEE
Confidence 5778876553 33333222222 245677777777776666777776654 44555543
No 317
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=20.95 E-value=5.2e+02 Score=24.58 Aligned_cols=34 Identities=21% Similarity=0.104 Sum_probs=22.6
Q ss_pred eEEEecCchhHHHHH-HHHHHHHHcCceEEEcCCC
Q 017382 213 QFLHCLPLHHVHGLF-NALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 213 ~~l~~~pl~~~~~~~-~~~~~~l~~G~~~~~~~~~ 246 (372)
+++...|+.+...+. ..+..+|.+|.++++-|..
T Consensus 99 vV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~ 133 (429)
T cd07100 99 VVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHAS 133 (429)
T ss_pred EEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 456667776654322 2466788899999888753
No 318
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=20.88 E-value=5.6e+02 Score=24.31 Aligned_cols=58 Identities=9% Similarity=-0.094 Sum_probs=43.5
Q ss_pred EEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHHHHHHHhhCCceEEEeccchHHH
Q 017382 71 IGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESELLHVMHDSDISMVLSTEDYREV 128 (372)
Q Consensus 71 V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 128 (372)
-.+....+-.-+.+-+++...|..+..+=|...+.+-...++..++.++.++..+.+.
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a 193 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKA 193 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHH
Confidence 4566666777788888999999866655555556666778999999999998654443
No 319
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=20.88 E-value=6.4e+02 Score=24.64 Aligned_cols=34 Identities=12% Similarity=0.159 Sum_probs=25.0
Q ss_pred CeEEEecCchhHHHHHH-HHHHHHHcCceEEEcCC
Q 017382 212 DQFLHCLPLHHVHGLFN-ALLAPLYAGATVEFMPK 245 (372)
Q Consensus 212 d~~l~~~pl~~~~~~~~-~~~~~l~~G~~~~~~~~ 245 (372)
-+++...|+++...+.. .+..+|..|.++++-|.
T Consensus 144 GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPS 178 (489)
T cd07126 144 GPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVD 178 (489)
T ss_pred eEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 35677788877764433 36678999999999876
No 320
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=20.82 E-value=5.1e+02 Score=25.13 Aligned_cols=34 Identities=12% Similarity=0.039 Sum_probs=24.5
Q ss_pred eEEEecCchhHHHHH-HHHHHHHHcCceEEEcCCC
Q 017382 213 QFLHCLPLHHVHGLF-NALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 213 ~~l~~~pl~~~~~~~-~~~~~~l~~G~~~~~~~~~ 246 (372)
+++...|+++...+. ..+..+|..|.++++-|..
T Consensus 139 vv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~ 173 (477)
T TIGR01722 139 VCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSE 173 (477)
T ss_pred eEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcc
Confidence 777788887765443 2345789999999998753
No 321
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=20.28 E-value=5.3e+02 Score=24.73 Aligned_cols=34 Identities=21% Similarity=0.105 Sum_probs=24.8
Q ss_pred eEEEecCchhHHHHHH-HHHHHHHcCceEEEcCCC
Q 017382 213 QFLHCLPLHHVHGLFN-ALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 213 ~~l~~~pl~~~~~~~~-~~~~~l~~G~~~~~~~~~ 246 (372)
+++...|+++...... .+..+|..|.++++-|..
T Consensus 123 VV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 157 (456)
T cd07110 123 VVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSE 157 (456)
T ss_pred eEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcc
Confidence 6777778776655432 466789999999998764
No 322
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=20.15 E-value=5.1e+02 Score=22.91 Aligned_cols=72 Identities=17% Similarity=0.318 Sum_probs=42.3
Q ss_pred CEEEEEcCCCHhHHHHHHHHHhhCceeeeCCCCCCHHH---HHHHHhhCCceEEEeccchH-HHHHHHHhhcCCcc
Q 017382 69 ARIGIVAKPSFEFVAGVLGTWFSGCIAVPLALSYPESE---LLHVMHDSDISMVLSTEDYR-EVLQNVASKSGAKF 140 (372)
Q Consensus 69 d~V~l~~~n~~~~~~~~~A~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~vi~~~~~~-~~~~~~~~~~~~~~ 140 (372)
.+..+...+...+++-.+++-..+..-.--...-++.+ +...+++.++++||+.+... +.++.+....+.++
T Consensus 171 ~~~~v~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v 246 (282)
T cd01017 171 GKTFVTQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFFEENASSKIAETLAKETGAKL 246 (282)
T ss_pred CCeEEEecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCcE
Confidence 34566777788888887776665532211122334544 45566788999999987654 33444444444443
No 323
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=20.13 E-value=5.9e+02 Score=24.35 Aligned_cols=34 Identities=24% Similarity=0.155 Sum_probs=22.5
Q ss_pred eEEEecCchhHHHH-HHHHHHHHHcCceEEEcCCC
Q 017382 213 QFLHCLPLHHVHGL-FNALLAPLYAGATVEFMPKF 246 (372)
Q Consensus 213 ~~l~~~pl~~~~~~-~~~~~~~l~~G~~~~~~~~~ 246 (372)
+++...|+.+...+ ...+..+|..|.++++-|..
T Consensus 119 Vv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~ 153 (452)
T cd07102 119 VVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSP 153 (452)
T ss_pred EEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 56667776655321 23567788889988888753
No 324
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=20.01 E-value=8e+02 Score=23.72 Aligned_cols=47 Identities=11% Similarity=0.021 Sum_probs=32.9
Q ss_pred ccCCCCCEEEEEcCCCHhHHHHHHH-HHhhCceeeeC--C------------CCCCHHHHHHHHhhC
Q 017382 63 LAGGCGARIGIVAKPSFEFVAGVLG-TWFSGCIAVPL--A------------LSYPESELLHVMHDS 114 (372)
Q Consensus 63 ~gv~~gd~V~l~~~n~~~~~~~~~A-~~~~G~~~v~l--~------------~~~~~~~l~~~l~~~ 114 (372)
+++++||.| + +..++.+.-+ +...|++++-+ + -+++.+.+...++..
T Consensus 105 l~l~pGDeV----p-sn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 105 IAIKPGDYV----P-GNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred hCCCCcCEE----C-CceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccc
Confidence 589999977 3 4556666666 68888877766 2 134688888888753
Done!