Query 017383
Match_columns 372
No_of_seqs 443 out of 2847
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 13:32:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017383.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017383hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.9 4.7E-21 1.6E-25 156.1 15.3 119 74-194 5-124 (126)
2 4ga2_A E3 SUMO-protein ligase 99.8 3.1E-21 1.1E-25 161.9 11.2 139 54-194 2-143 (150)
3 2pl2_A Hypothetical conserved 99.8 1.9E-18 6.6E-23 153.4 17.1 145 60-207 17-183 (217)
4 3gyz_A Chaperone protein IPGC; 99.8 1E-18 3.5E-23 147.0 14.3 115 69-185 23-138 (151)
5 2pl2_A Hypothetical conserved 99.8 6.2E-19 2.1E-23 156.7 13.5 173 12-196 11-196 (217)
6 3vtx_A MAMA; tetratricopeptide 99.8 4.6E-18 1.6E-22 145.8 17.8 150 56-207 12-173 (184)
7 2vgx_A Chaperone SYCD; alterna 99.8 8.8E-19 3E-23 146.6 12.9 131 67-199 6-137 (148)
8 4gyw_A UDP-N-acetylglucosamine 99.8 1.6E-18 5.6E-23 180.3 16.7 137 56-194 16-154 (723)
9 2h6f_A Protein farnesyltransfe 99.8 2.4E-18 8.3E-23 166.4 15.9 136 60-197 109-246 (382)
10 3vtx_A MAMA; tetratricopeptide 99.8 1.6E-18 5.5E-23 148.7 12.7 165 11-186 10-176 (184)
11 2hr2_A Hypothetical protein; a 99.8 8.4E-19 2.9E-23 147.6 10.4 118 83-200 10-151 (159)
12 4gcn_A Protein STI-1; structur 99.8 9.5E-18 3.3E-22 136.5 13.7 110 83-193 7-124 (127)
13 3rkv_A Putative peptidylprolyl 99.8 1.5E-17 5E-22 140.3 15.1 118 82-199 9-146 (162)
14 2xcb_A PCRH, regulatory protei 99.8 1.1E-17 3.6E-22 138.4 13.7 129 69-199 5-134 (142)
15 3upv_A Heat shock protein STI1 99.8 2.5E-17 8.4E-22 132.7 15.2 114 83-196 3-123 (126)
16 4i17_A Hypothetical protein; T 99.7 1.3E-17 4.4E-22 148.2 13.9 127 60-188 19-156 (228)
17 4i17_A Hypothetical protein; T 99.7 9.3E-17 3.2E-21 142.5 18.6 124 84-207 7-149 (228)
18 2h6f_A Protein farnesyltransfe 99.7 8.7E-18 3E-22 162.6 11.4 172 14-196 105-285 (382)
19 3urz_A Uncharacterized protein 99.7 8.6E-17 3E-21 141.8 16.1 147 60-208 16-190 (208)
20 4gyw_A UDP-N-acetylglucosamine 99.7 7.8E-18 2.7E-22 175.2 9.4 163 11-184 14-178 (723)
21 1p5q_A FKBP52, FK506-binding p 99.7 2.8E-17 9.7E-22 156.0 12.1 139 60-200 125-279 (336)
22 3sz7_A HSC70 cochaperone (SGT) 99.7 2.2E-16 7.4E-21 133.4 15.9 107 82-188 9-116 (164)
23 4abn_A Tetratricopeptide repea 99.7 4.9E-17 1.7E-21 161.6 12.3 137 60-199 149-306 (474)
24 2e2e_A Formate-dependent nitri 99.7 3.6E-16 1.2E-20 133.3 15.6 128 59-188 21-152 (177)
25 2fbn_A 70 kDa peptidylprolyl i 99.7 1.8E-16 6.1E-21 138.1 13.5 139 60-200 16-171 (198)
26 4eqf_A PEX5-related protein; a 99.7 1.6E-16 5.5E-21 150.6 13.8 131 54-184 182-314 (365)
27 1kt0_A FKBP51, 51 kDa FK506-bi 99.7 5.7E-17 2E-21 160.4 10.4 139 60-200 246-400 (457)
28 4abn_A Tetratricopeptide repea 99.7 2.7E-16 9.1E-21 156.3 14.9 148 60-209 114-292 (474)
29 1w3b_A UDP-N-acetylglucosamine 99.7 3.5E-16 1.2E-20 149.7 14.8 166 11-187 140-307 (388)
30 1w3b_A UDP-N-acetylglucosamine 99.7 2.6E-16 8.8E-21 150.7 13.6 186 12-208 107-304 (388)
31 3qky_A Outer membrane assembly 99.7 8.7E-16 3E-20 139.4 16.2 126 59-184 26-181 (261)
32 4gco_A Protein STI-1; structur 99.7 2.7E-16 9.2E-21 127.7 11.1 101 59-161 24-125 (126)
33 3uq3_A Heat shock protein STI1 99.7 1.1E-15 3.7E-20 136.6 15.8 173 12-194 11-216 (258)
34 3uq3_A Heat shock protein STI1 99.7 5.2E-16 1.8E-20 138.6 13.3 132 61-194 118-256 (258)
35 3as5_A MAMA; tetratricopeptide 99.7 3.1E-15 1E-19 126.4 17.4 134 60-195 20-154 (186)
36 3u4t_A TPR repeat-containing p 99.7 1.9E-15 6.4E-20 136.8 17.0 132 59-192 14-149 (272)
37 1fch_A Peroxisomal targeting s 99.7 8.6E-16 2.9E-20 145.1 14.6 145 55-199 188-344 (368)
38 4eqf_A PEX5-related protein; a 99.7 8.4E-16 2.9E-20 145.7 14.2 164 14-188 73-284 (365)
39 3q49_B STIP1 homology and U bo 99.7 3E-15 1E-19 121.5 15.2 114 83-196 8-127 (137)
40 1hxi_A PEX5, peroxisome target 99.6 1E-15 3.5E-20 123.3 12.0 100 87-186 20-120 (121)
41 2q7f_A YRRB protein; TPR, prot 99.6 2.7E-15 9.3E-20 133.1 15.7 139 54-194 28-168 (243)
42 3ieg_A DNAJ homolog subfamily 99.6 5.6E-15 1.9E-19 138.1 18.6 141 60-200 200-355 (359)
43 1xnf_A Lipoprotein NLPI; TPR, 99.6 4.5E-15 1.5E-19 134.1 17.1 129 60-188 17-148 (275)
44 3qky_A Outer membrane assembly 99.6 1.4E-15 4.7E-20 138.1 13.5 166 17-188 26-232 (261)
45 1elw_A TPR1-domain of HOP; HOP 99.6 1.1E-14 3.9E-19 113.7 16.8 113 83-195 3-116 (118)
46 2q7f_A YRRB protein; TPR, prot 99.6 4.5E-15 1.5E-19 131.6 16.3 133 60-194 69-202 (243)
47 1hh8_A P67PHOX, NCF-2, neutrop 99.6 4.3E-15 1.5E-19 129.8 15.9 121 60-185 18-155 (213)
48 2vsy_A XCC0866; transferase, g 99.6 3.1E-15 1.1E-19 151.4 16.5 133 61-195 2-135 (568)
49 2pzi_A Probable serine/threoni 99.6 7.4E-16 2.5E-20 159.8 12.1 133 60-195 445-578 (681)
50 2vq2_A PILW, putative fimbrial 99.6 3.6E-15 1.2E-19 130.3 14.5 168 14-192 16-189 (225)
51 3hym_B Cell division cycle pro 99.6 3.9E-15 1.3E-19 137.8 15.5 127 60-188 137-273 (330)
52 4ga2_A E3 SUMO-protein ligase 99.6 5.1E-16 1.7E-20 129.8 8.5 108 89-196 2-110 (150)
53 3urz_A Uncharacterized protein 99.6 8.6E-15 2.9E-19 128.9 16.5 113 84-196 4-133 (208)
54 3hym_B Cell division cycle pro 99.6 1.1E-14 3.6E-19 134.9 17.8 168 18-195 34-203 (330)
55 2vq2_A PILW, putative fimbrial 99.6 1.2E-14 4.1E-19 126.9 17.1 133 60-194 20-156 (225)
56 3u4t_A TPR repeat-containing p 99.6 1.2E-14 4.2E-19 131.4 17.5 174 13-196 10-187 (272)
57 2pzi_A Probable serine/threoni 99.6 9.8E-16 3.3E-20 158.9 11.2 134 59-195 402-544 (681)
58 2lni_A Stress-induced-phosphop 99.6 7.8E-15 2.7E-19 117.6 14.1 114 83-196 15-129 (133)
59 2ho1_A Type 4 fimbrial biogene 99.6 2.1E-14 7.1E-19 128.5 18.3 131 60-192 83-216 (252)
60 1a17_A Serine/threonine protei 99.6 3.6E-14 1.2E-18 118.3 18.6 118 83-200 12-130 (166)
61 2dba_A Smooth muscle cell asso 99.6 1.7E-14 5.9E-19 117.9 16.2 112 83-194 27-142 (148)
62 2ho1_A Type 4 fimbrial biogene 99.6 1.4E-14 4.8E-19 129.6 16.9 133 60-194 49-184 (252)
63 3cv0_A Peroxisome targeting si 99.6 1.8E-14 6E-19 133.2 16.9 136 59-196 149-297 (327)
64 2vyi_A SGTA protein; chaperone 99.6 3.3E-14 1.1E-18 113.0 16.2 115 83-197 11-126 (131)
65 2fo7_A Synthetic consensus TPR 99.6 2.1E-14 7.2E-19 114.4 14.8 123 60-184 13-136 (136)
66 3ieg_A DNAJ homolog subfamily 99.6 2.7E-14 9.2E-19 133.4 17.6 171 13-194 10-197 (359)
67 1fch_A Peroxisomal targeting s 99.6 1E-14 3.6E-19 137.6 14.9 148 60-207 37-213 (368)
68 3mkr_A Coatomer subunit epsilo 99.6 4E-14 1.4E-18 131.6 17.5 164 12-190 71-239 (291)
69 2yhc_A BAMD, UPF0169 lipoprote 99.6 2E-14 6.9E-19 127.9 14.7 127 60-186 16-182 (225)
70 1elr_A TPR2A-domain of HOP; HO 99.6 4.8E-14 1.7E-18 112.2 15.3 116 83-199 3-126 (131)
71 1ihg_A Cyclophilin 40; ppiase 99.6 2.6E-14 8.8E-19 137.6 16.2 118 83-200 222-356 (370)
72 2xev_A YBGF; tetratricopeptide 99.6 6.1E-14 2.1E-18 112.4 15.9 106 87-192 5-117 (129)
73 2y4t_A DNAJ homolog subfamily 99.6 1.3E-14 4.4E-19 140.9 14.2 106 91-196 264-374 (450)
74 3as5_A MAMA; tetratricopeptide 99.6 2.8E-14 9.7E-19 120.4 14.3 124 60-185 54-178 (186)
75 1xnf_A Lipoprotein NLPI; TPR, 99.6 6.6E-14 2.3E-18 126.4 17.2 120 60-182 55-175 (275)
76 3qou_A Protein YBBN; thioredox 99.6 1.4E-14 4.9E-19 134.1 12.7 138 60-199 129-269 (287)
77 1zu2_A Mitochondrial import re 99.6 1.1E-14 3.7E-19 122.3 10.6 98 95-192 13-132 (158)
78 1qqe_A Vesicular transport pro 99.6 1.8E-15 6.3E-20 140.3 5.5 126 60-185 89-233 (292)
79 2kck_A TPR repeat; tetratricop 99.6 2.9E-14 9.9E-19 110.5 11.5 105 78-184 2-110 (112)
80 3fp2_A TPR repeat-containing p 99.6 3.7E-14 1.3E-18 140.7 15.0 146 60-207 288-460 (537)
81 2y4t_A DNAJ homolog subfamily 99.6 3.9E-14 1.3E-18 137.6 14.8 168 16-194 153-338 (450)
82 1na0_A Designed protein CTPR3; 99.6 2.2E-13 7.5E-18 107.2 16.3 112 84-195 9-121 (125)
83 3fp2_A TPR repeat-containing p 99.5 1.9E-14 6.5E-19 142.8 11.7 177 13-194 209-387 (537)
84 2r5s_A Uncharacterized protein 99.5 2.6E-14 9E-19 122.1 11.0 135 60-196 18-155 (176)
85 3gyz_A Chaperone protein IPGC; 99.5 9.3E-15 3.2E-19 122.7 7.9 115 94-208 12-137 (151)
86 3cv0_A Peroxisome targeting si 99.5 2.4E-14 8.4E-19 132.3 11.5 98 94-191 148-246 (327)
87 1qqe_A Vesicular transport pro 99.5 1.2E-14 4.3E-19 134.6 9.4 127 60-186 49-193 (292)
88 2yhc_A BAMD, UPF0169 lipoprote 99.5 5.2E-14 1.8E-18 125.2 13.1 164 16-185 14-218 (225)
89 3mkr_A Coatomer subunit epsilo 99.5 2.2E-13 7.7E-18 126.4 17.9 142 60-202 142-285 (291)
90 1a17_A Serine/threonine protei 99.5 8.7E-14 3E-18 115.9 13.6 118 60-179 25-145 (166)
91 2xpi_A Anaphase-promoting comp 99.5 5.8E-14 2E-18 141.5 14.8 127 60-188 419-553 (597)
92 2xpi_A Anaphase-promoting comp 99.5 4.6E-14 1.6E-18 142.2 14.0 133 60-194 453-593 (597)
93 1p5q_A FKBP52, FK506-binding p 99.5 6.3E-14 2.1E-18 132.9 13.8 119 60-178 159-292 (336)
94 2vsy_A XCC0866; transferase, g 99.5 1.2E-13 4.1E-18 139.7 15.3 126 60-187 35-164 (568)
95 2if4_A ATFKBP42; FKBP-like, al 99.5 1.8E-14 6.2E-19 136.8 8.6 114 83-196 178-309 (338)
96 3k9i_A BH0479 protein; putativ 99.5 3.8E-14 1.3E-18 112.8 8.7 93 96-188 2-98 (117)
97 1wao_1 Serine/threonine protei 99.5 2.5E-14 8.5E-19 142.2 9.2 130 53-184 10-154 (477)
98 2c2l_A CHIP, carboxy terminus 99.5 2.1E-13 7.1E-18 125.9 14.8 102 83-184 3-105 (281)
99 3upv_A Heat shock protein STI1 99.5 1.7E-13 5.8E-18 109.9 12.0 104 59-164 15-125 (126)
100 2gw1_A Mitochondrial precursor 99.5 2.5E-13 8.5E-18 133.6 15.0 130 60-191 350-489 (514)
101 1hh8_A P67PHOX, NCF-2, neutrop 99.5 3.1E-13 1.1E-17 117.9 14.1 101 83-185 5-105 (213)
102 2fo7_A Synthetic consensus TPR 99.5 1.3E-12 4.5E-17 103.7 15.5 109 86-194 3-112 (136)
103 2ond_A Cleavage stimulation fa 99.5 8.8E-13 3E-17 122.9 16.7 137 65-203 81-231 (308)
104 3sz7_A HSC70 cochaperone (SGT) 99.5 1.9E-13 6.5E-18 115.1 10.9 99 60-160 23-122 (164)
105 3rkv_A Putative peptidylprolyl 99.5 8.8E-14 3E-18 116.9 8.6 108 59-168 22-149 (162)
106 2lni_A Stress-induced-phosphop 99.5 4.3E-13 1.5E-17 107.2 12.2 105 60-166 28-133 (133)
107 2vyi_A SGTA protein; chaperone 99.5 4.6E-13 1.6E-17 106.2 12.0 106 60-167 24-130 (131)
108 3k9i_A BH0479 protein; putativ 99.5 1.5E-13 5.1E-18 109.3 8.9 104 60-165 2-109 (117)
109 2fbn_A 70 kDa peptidylprolyl i 99.5 3.6E-13 1.2E-17 117.0 12.0 121 59-179 49-185 (198)
110 3edt_B KLC 2, kinesin light ch 99.5 3.4E-13 1.2E-17 121.5 12.1 135 60-194 13-178 (283)
111 2hr2_A Hypothetical protein; a 99.5 1.3E-13 4.5E-18 115.9 8.3 97 59-155 22-140 (159)
112 2if4_A ATFKBP42; FKBP-like, al 99.5 8.3E-14 2.8E-18 132.2 8.0 128 59-186 190-334 (338)
113 1wao_1 Serine/threonine protei 99.5 1.1E-13 3.8E-18 137.5 9.3 123 84-206 6-129 (477)
114 2gw1_A Mitochondrial precursor 99.5 3.9E-13 1.3E-17 132.2 12.8 123 60-184 282-405 (514)
115 4g1t_A Interferon-induced prot 99.4 5.4E-13 1.9E-17 130.5 13.6 148 60-207 63-245 (472)
116 1kt0_A FKBP51, 51 kDa FK506-bi 99.4 2.3E-13 7.7E-18 134.5 10.9 114 60-173 280-407 (457)
117 3edt_B KLC 2, kinesin light ch 99.4 4.5E-13 1.5E-17 120.7 11.8 122 60-181 55-199 (283)
118 2ond_A Cleavage stimulation fa 99.4 1.1E-12 3.7E-17 122.3 14.6 141 65-207 33-201 (308)
119 2xcb_A PCRH, regulatory protei 99.4 3E-13 1E-17 111.4 9.3 104 60-165 30-134 (142)
120 2c2l_A CHIP, carboxy terminus 99.4 4.1E-13 1.4E-17 123.9 11.1 135 60-198 16-182 (281)
121 4gcn_A Protein STI-1; structur 99.4 3.8E-13 1.3E-17 109.0 9.5 89 59-149 19-115 (127)
122 1zu2_A Mitochondrial import re 99.4 4.5E-13 1.5E-17 112.4 9.9 90 60-151 14-125 (158)
123 3u3w_A Transcriptional activat 99.4 9.4E-13 3.2E-17 121.7 12.5 121 60-180 127-266 (293)
124 2ifu_A Gamma-SNAP; membrane fu 99.4 1.2E-13 4.3E-18 128.8 6.5 130 55-186 82-229 (307)
125 2vgx_A Chaperone SYCD; alterna 99.4 4.3E-13 1.5E-17 111.7 8.8 105 102-206 5-120 (148)
126 3ulq_A Response regulator aspa 99.4 3.2E-13 1.1E-17 129.2 9.2 123 60-182 155-295 (383)
127 2l6j_A TPR repeat-containing p 99.4 1.3E-13 4.4E-18 107.3 5.1 94 83-176 3-103 (111)
128 3ulq_A Response regulator aspa 99.4 1.1E-12 3.9E-17 125.5 12.1 134 60-193 115-272 (383)
129 3q15_A PSP28, response regulat 99.4 5.9E-13 2E-17 127.4 9.5 128 55-182 147-292 (378)
130 1hxi_A PEX5, peroxisome target 99.4 1E-12 3.6E-17 105.5 9.4 91 60-152 29-120 (121)
131 4g1t_A Interferon-induced prot 99.4 2.5E-12 8.6E-17 125.8 13.8 125 60-186 225-369 (472)
132 3nf1_A KLC 1, kinesin light ch 99.4 1.8E-12 6.3E-17 118.7 11.6 122 60-181 81-225 (311)
133 2r5s_A Uncharacterized protein 99.4 4.3E-13 1.5E-17 114.4 6.5 152 16-179 16-172 (176)
134 1elw_A TPR1-domain of HOP; HOP 99.4 7.5E-12 2.6E-16 97.4 13.0 100 60-161 16-116 (118)
135 2ifu_A Gamma-SNAP; membrane fu 99.4 3.4E-13 1.2E-17 125.8 6.0 128 56-184 43-188 (307)
136 1na0_A Designed protein CTPR3; 99.4 8.2E-12 2.8E-16 98.0 13.1 104 60-165 21-125 (125)
137 2kat_A Uncharacterized protein 99.4 1E-11 3.6E-16 97.8 13.7 98 101-198 2-102 (115)
138 3u3w_A Transcriptional activat 99.4 3.7E-12 1.3E-16 117.7 12.5 124 60-183 87-228 (293)
139 3dra_A Protein farnesyltransfe 99.4 9.3E-12 3.2E-16 116.4 15.1 121 66-188 51-183 (306)
140 1ihg_A Cyclophilin 40; ppiase 99.4 1.9E-12 6.6E-17 124.4 10.7 112 60-173 235-363 (370)
141 2qfc_A PLCR protein; TPR, HTH, 99.4 4E-12 1.4E-16 117.4 12.3 122 60-181 127-267 (293)
142 3qou_A Protein YBBN; thioredox 99.4 1.4E-12 4.9E-17 120.6 9.2 151 18-179 129-283 (287)
143 1dce_A Protein (RAB geranylger 99.4 1.2E-11 4E-16 125.5 16.4 129 64-194 45-187 (567)
144 4f3v_A ESX-1 secretion system 99.3 7.7E-12 2.6E-16 115.0 13.4 127 60-190 114-246 (282)
145 2dba_A Smooth muscle cell asso 99.3 7.8E-12 2.7E-16 101.9 12.0 104 60-163 40-145 (148)
146 3nf1_A KLC 1, kinesin light ch 99.3 3.5E-12 1.2E-16 116.8 11.0 119 60-180 39-182 (311)
147 3dra_A Protein farnesyltransfe 99.3 2.2E-11 7.6E-16 113.8 16.4 138 60-199 79-234 (306)
148 3q49_B STIP1 homology and U bo 99.3 3.5E-12 1.2E-16 103.1 9.6 104 60-165 21-130 (137)
149 3q15_A PSP28, response regulat 99.3 5.9E-12 2E-16 120.4 12.7 135 60-194 113-270 (378)
150 1dce_A Protein (RAB geranylger 99.3 4.9E-12 1.7E-16 128.3 12.1 129 64-194 89-235 (567)
151 3dss_A Geranylgeranyl transfer 99.3 9.6E-11 3.3E-15 110.4 19.6 134 62-197 43-191 (331)
152 2e2e_A Formate-dependent nitri 99.3 2.8E-12 9.5E-17 108.9 8.1 103 92-194 18-124 (177)
153 2qfc_A PLCR protein; TPR, HTH, 99.3 3E-11 1E-15 111.5 15.3 123 60-182 87-227 (293)
154 2xev_A YBGF; tetratricopeptide 99.3 2.7E-11 9.2E-16 96.7 13.0 107 60-166 14-125 (129)
155 1ouv_A Conserved hypothetical 99.3 8.3E-11 2.8E-15 106.8 17.5 123 60-191 18-152 (273)
156 3ro3_A PINS homolog, G-protein 99.3 8.6E-12 2.9E-16 102.3 9.9 124 60-183 21-161 (164)
157 3dss_A Geranylgeranyl transfer 99.3 6.8E-11 2.3E-15 111.4 16.7 124 64-189 90-231 (331)
158 3gw4_A Uncharacterized protein 99.3 1.4E-11 4.7E-16 106.1 11.1 121 59-181 3-137 (203)
159 2kat_A Uncharacterized protein 99.3 2.3E-11 7.8E-16 95.9 11.2 99 65-165 2-103 (115)
160 4a1s_A PINS, partner of inscut 99.3 8.1E-12 2.8E-16 119.7 9.7 122 60-181 60-213 (411)
161 1na3_A Designed protein CTPR2; 99.3 4.7E-11 1.6E-15 89.1 11.9 83 83-165 8-91 (91)
162 1ouv_A Conserved hypothetical 99.3 1.9E-10 6.6E-15 104.3 17.6 136 61-205 55-216 (273)
163 3gw4_A Uncharacterized protein 99.3 2.2E-11 7.5E-16 104.8 10.6 123 60-182 38-178 (203)
164 3rjv_A Putative SEL1 repeat pr 99.3 9.3E-11 3.2E-15 103.3 14.6 112 62-180 32-158 (212)
165 3rjv_A Putative SEL1 repeat pr 99.3 4.1E-11 1.4E-15 105.6 12.3 109 66-182 4-120 (212)
166 3q7a_A Farnesyltransferase alp 99.3 7E-11 2.4E-15 111.9 14.4 122 65-188 71-204 (349)
167 3sf4_A G-protein-signaling mod 99.2 1.5E-11 5.2E-16 116.9 9.7 121 60-180 21-176 (406)
168 2kc7_A BFR218_protein; tetratr 99.2 1E-11 3.5E-16 95.0 6.8 87 89-183 5-93 (99)
169 4a1s_A PINS, partner of inscut 99.2 4.1E-12 1.4E-16 121.8 5.4 165 14-183 56-255 (411)
170 3ro2_A PINS homolog, G-protein 99.2 1.9E-11 6.4E-16 112.4 8.9 122 60-181 17-173 (338)
171 3sf4_A G-protein-signaling mod 99.2 1.2E-11 4.2E-16 117.5 7.9 124 60-183 99-259 (406)
172 2ooe_A Cleavage stimulation fa 99.2 1.8E-10 6.1E-15 115.3 16.3 142 61-204 292-454 (530)
173 1elr_A TPR2A-domain of HOP; HO 99.2 4.3E-11 1.5E-15 94.8 9.1 104 60-166 16-127 (131)
174 3q7a_A Farnesyltransferase alp 99.2 1.4E-10 4.7E-15 109.9 14.1 104 89-192 59-166 (349)
175 2kc7_A BFR218_protein; tetratr 99.2 9.5E-11 3.3E-15 89.4 9.3 87 120-206 3-92 (99)
176 1na3_A Designed protein CTPR2; 99.2 3.4E-10 1.2E-14 84.4 11.8 80 117-196 9-88 (91)
177 2l6j_A TPR repeat-containing p 99.2 3.8E-10 1.3E-14 87.3 12.5 68 117-184 4-71 (111)
178 3ro3_A PINS homolog, G-protein 99.2 1.1E-10 3.8E-15 95.5 9.2 100 83-182 8-120 (164)
179 3ro2_A PINS homolog, G-protein 99.1 5.1E-11 1.7E-15 109.5 7.8 122 60-181 95-253 (338)
180 3ma5_A Tetratricopeptide repea 99.1 2.7E-10 9.2E-15 87.9 10.6 71 114-184 3-74 (100)
181 1hz4_A MALT regulatory protein 99.1 6.8E-10 2.3E-14 105.3 14.8 124 60-183 26-167 (373)
182 4f3v_A ESX-1 secretion system 99.1 3.4E-10 1.2E-14 104.1 12.0 117 90-207 108-240 (282)
183 2ooe_A Cleavage stimulation fa 99.1 5.9E-10 2E-14 111.5 14.3 142 65-208 255-424 (530)
184 2kck_A TPR repeat; tetratricop 99.1 3.3E-10 1.1E-14 87.2 9.5 89 60-150 18-110 (112)
185 1klx_A Cysteine rich protein B 99.0 2.7E-09 9.3E-14 87.5 13.1 112 62-182 9-128 (138)
186 3ma5_A Tetratricopeptide repea 99.0 7.7E-10 2.6E-14 85.2 9.2 86 78-165 3-91 (100)
187 3n71_A Histone lysine methyltr 99.0 5.3E-10 1.8E-14 111.1 10.4 120 60-179 321-463 (490)
188 1hz4_A MALT regulatory protein 99.0 2.2E-09 7.5E-14 101.7 11.3 122 60-181 65-204 (373)
189 2xm6_A Protein corresponding t 98.9 1.1E-08 3.9E-13 101.0 15.2 114 61-181 272-397 (490)
190 1pc2_A Mitochondria fission pr 98.9 1.7E-08 5.8E-13 83.7 12.3 97 98-194 12-114 (152)
191 3e4b_A ALGK; tetratricopeptide 98.9 1.6E-08 5.5E-13 99.4 13.4 119 63-192 194-325 (452)
192 2xm6_A Protein corresponding t 98.9 6.5E-08 2.2E-12 95.6 17.4 119 61-188 56-186 (490)
193 3ly7_A Transcriptional activat 98.8 2.7E-08 9.2E-13 94.3 13.3 123 61-186 212-345 (372)
194 3n71_A Histone lysine methyltr 98.8 4.3E-08 1.5E-12 97.4 14.9 100 89-188 314-435 (490)
195 4b4t_Q 26S proteasome regulato 98.8 3.5E-09 1.2E-13 102.1 6.5 163 20-182 18-206 (434)
196 4b4t_Q 26S proteasome regulato 98.8 2.6E-08 9E-13 95.9 11.3 121 60-180 16-164 (434)
197 1xi4_A Clathrin heavy chain; a 98.8 4.8E-08 1.6E-12 105.7 13.9 105 87-198 1198-1327(1630)
198 2v5f_A Prolyl 4-hydroxylase su 98.8 6.8E-08 2.3E-12 75.0 10.9 72 87-158 8-87 (104)
199 2v5f_A Prolyl 4-hydroxylase su 98.8 1.2E-07 4.1E-12 73.6 12.3 78 117-194 5-89 (104)
200 3bee_A Putative YFRE protein; 98.7 1.3E-07 4.4E-12 72.1 11.0 71 114-184 2-76 (93)
201 3qww_A SET and MYND domain-con 98.7 9.4E-08 3.2E-12 93.4 12.4 95 95-189 309-425 (433)
202 3qwp_A SET and MYND domain-con 98.7 1.3E-07 4.3E-12 92.5 13.3 101 89-189 292-414 (429)
203 3e4b_A ALGK; tetratricopeptide 98.7 1.5E-07 5E-12 92.5 13.8 117 68-194 165-292 (452)
204 3mv2_B Coatomer subunit epsilo 98.7 2.6E-07 9E-12 85.9 14.3 115 67-183 85-210 (310)
205 3mv2_B Coatomer subunit epsilo 98.7 3E-07 1E-11 85.5 14.4 126 60-190 112-260 (310)
206 1b89_A Protein (clathrin heavy 98.6 3E-07 1E-11 89.4 13.9 129 53-199 126-255 (449)
207 3qww_A SET and MYND domain-con 98.6 1.4E-07 4.8E-12 92.2 9.7 94 60-153 310-423 (433)
208 1pc2_A Mitochondria fission pr 98.6 4.9E-07 1.7E-11 74.9 10.7 98 62-161 12-115 (152)
209 3ly7_A Transcriptional activat 98.5 1.4E-06 4.8E-11 82.6 14.5 135 74-209 186-344 (372)
210 3qwp_A SET and MYND domain-con 98.5 2.9E-07 9.9E-12 89.9 10.0 105 60-164 299-426 (429)
211 3u64_A Protein TP_0956; tetrat 98.5 1.6E-06 5.6E-11 79.1 13.3 86 99-184 178-273 (301)
212 1nzn_A CGI-135 protein, fissio 98.4 5E-06 1.7E-10 66.4 12.6 102 95-196 12-119 (126)
213 1xi4_A Clathrin heavy chain; a 98.4 2.5E-06 8.5E-11 92.5 14.0 141 8-177 1078-1247(1630)
214 3bee_A Putative YFRE protein; 98.4 1.6E-06 5.5E-11 65.9 8.9 71 78-150 2-76 (93)
215 1klx_A Cysteine rich protein B 98.3 9E-06 3.1E-10 66.2 11.8 90 97-194 8-102 (138)
216 1b89_A Protein (clathrin heavy 98.3 3.2E-07 1.1E-11 89.2 2.9 77 87-175 125-201 (449)
217 3u64_A Protein TP_0956; tetrat 98.1 6.1E-06 2.1E-10 75.4 7.9 91 60-150 175-273 (301)
218 3o48_A Mitochondria fission 1 97.9 0.00016 5.6E-09 57.9 12.5 83 114-196 37-123 (134)
219 4e6h_A MRNA 3'-END-processing 97.9 6.9E-05 2.4E-09 77.2 13.1 112 67-180 328-463 (679)
220 1y8m_A FIS1; mitochondria, unk 97.9 0.00034 1.2E-08 56.8 13.3 81 114-194 36-120 (144)
221 1nzn_A CGI-135 protein, fissio 97.8 0.00012 4.1E-09 58.4 10.1 94 66-161 19-118 (126)
222 4e6h_A MRNA 3'-END-processing 97.8 0.00014 4.7E-09 75.0 12.1 145 60-206 355-535 (679)
223 3ffl_A Anaphase-promoting comp 97.4 0.0005 1.7E-08 57.3 8.1 92 85-176 21-147 (167)
224 4h7y_A Dual specificity protei 97.4 0.0023 7.8E-08 52.4 11.8 108 77-187 8-130 (161)
225 3o48_A Mitochondria fission 1 97.4 0.0022 7.6E-08 51.3 11.3 80 82-161 38-122 (134)
226 1y8m_A FIS1; mitochondria, unk 97.3 0.0045 1.5E-07 50.1 12.7 79 82-160 37-120 (144)
227 3ffl_A Anaphase-promoting comp 97.2 0.0005 1.7E-08 57.3 5.6 102 59-161 31-165 (167)
228 4g26_A Pentatricopeptide repea 97.0 0.01 3.4E-07 58.8 14.7 124 60-184 82-210 (501)
229 4g26_A Pentatricopeptide repea 97.0 0.021 7.3E-07 56.4 16.6 140 60-200 38-200 (501)
230 2uy1_A Cleavage stimulation fa 96.9 0.019 6.5E-07 56.6 15.8 120 65-188 196-357 (493)
231 4gns_B Protein CSD3, chitin bi 96.6 0.0079 2.7E-07 62.2 10.2 111 64-177 265-397 (754)
232 2uy1_A Cleavage stimulation fa 96.4 0.072 2.5E-06 52.4 15.8 115 60-177 225-380 (493)
233 2ff4_A Probable regulatory pro 96.0 0.1 3.5E-06 49.7 13.8 91 89-179 120-233 (388)
234 1ya0_A SMG-7 transcript varian 95.4 0.089 3E-06 51.8 10.8 78 86-163 154-232 (497)
235 1ya0_A SMG-7 transcript varian 95.4 0.089 3E-06 51.8 10.9 78 119-196 154-231 (497)
236 4b4t_R RPN7, 26S proteasome re 95.3 0.05 1.7E-06 52.6 8.9 97 86-182 133-239 (429)
237 3kae_A CDC27, possible protein 95.1 0.75 2.6E-05 38.3 13.8 96 89-188 38-151 (242)
238 4gns_B Protein CSD3, chitin bi 94.7 0.12 4E-06 53.5 9.9 58 86-143 339-397 (754)
239 3txn_A 26S proteasome regulato 94.4 0.27 9.1E-06 46.9 10.9 91 89-179 104-209 (394)
240 4h7y_A Dual specificity protei 94.3 0.44 1.5E-05 38.9 10.4 99 65-165 36-141 (161)
241 3mkq_B Coatomer subunit alpha; 94.2 0.5 1.7E-05 39.7 11.1 99 60-177 17-115 (177)
242 3kae_A CDC27, possible protein 93.8 2.3 7.9E-05 35.4 13.9 82 60-148 45-145 (242)
243 3mkq_A Coatomer beta'-subunit; 93.6 0.23 8E-06 51.0 9.6 45 60-111 664-708 (814)
244 1zbp_A Hypothetical protein VP 93.5 0.39 1.3E-05 43.1 9.5 62 127-188 7-68 (273)
245 4b4t_S RPN3, 26S proteasome re 93.3 0.17 5.7E-06 49.8 7.4 126 60-185 148-304 (523)
246 1zbp_A Hypothetical protein VP 93.2 1.1 3.7E-05 40.2 11.8 116 59-184 8-133 (273)
247 2ff4_A Probable regulatory pro 92.9 0.56 1.9E-05 44.5 10.4 84 62-145 129-233 (388)
248 3spa_A Mtrpol, DNA-directed RN 92.2 2 6.9E-05 45.8 14.0 96 86-181 129-231 (1134)
249 4b4t_P 26S proteasome regulato 90.7 3.2 0.00011 40.0 13.2 98 83-180 136-247 (445)
250 3mkq_A Coatomer beta'-subunit; 89.0 3.2 0.00011 42.3 12.4 77 94-174 662-746 (814)
251 3txn_A 26S proteasome regulato 88.2 2 7E-05 40.8 9.3 112 55-166 105-235 (394)
252 4fhn_B Nucleoporin NUP120; pro 86.8 1.7 5.9E-05 47.2 9.0 26 317-342 1021-1050(1139)
253 3mkq_B Coatomer subunit alpha; 82.9 6.4 0.00022 32.8 8.8 47 94-144 15-61 (177)
254 4b4t_R RPN7, 26S proteasome re 82.4 7.1 0.00024 37.3 10.2 88 60-147 143-238 (429)
255 1qsa_A Protein (soluble lytic 81.4 5.7 0.00019 40.1 9.4 86 94-179 262-347 (618)
256 4b4t_S RPN3, 26S proteasome re 81.1 15 0.00051 36.0 11.9 70 81-150 228-303 (523)
257 3spa_A Mtrpol, DNA-directed RN 80.0 7.1 0.00024 41.7 9.7 87 60-146 139-230 (1134)
258 4a5x_A MITD1, MIT domain-conta 77.4 1.9 6.6E-05 31.4 3.3 35 78-112 10-44 (86)
259 4a5x_A MITD1, MIT domain-conta 75.9 20 0.00068 25.9 9.0 29 173-201 45-73 (86)
260 2crb_A Nuclear receptor bindin 75.0 3.7 0.00013 30.2 4.2 29 83-111 14-42 (97)
261 3ax2_A Mitochondrial import re 73.9 6.3 0.00022 27.7 5.1 29 88-116 21-49 (73)
262 2wpv_A GET4, UPF0363 protein Y 73.8 28 0.00096 31.7 10.9 27 149-175 132-158 (312)
263 4b4t_P 26S proteasome regulato 73.2 17 0.00057 34.9 9.8 86 60-145 149-246 (445)
264 3lpz_A GET4 (YOR164C homolog); 73.2 22 0.00076 32.7 10.1 26 149-174 134-159 (336)
265 1wy6_A Hypothetical protein ST 71.6 23 0.00078 28.4 8.3 80 97-180 74-154 (172)
266 3ax2_A Mitochondrial import re 70.9 12 0.00042 26.2 6.0 39 155-193 21-59 (73)
267 2w2u_A Hypothetical P60 katani 68.5 30 0.001 24.8 8.1 14 129-142 31-44 (83)
268 2ijq_A Hypothetical protein; s 67.7 27 0.00092 28.5 8.4 28 88-115 36-63 (161)
269 4gq2_M Nucleoporin NUP120; bet 66.7 40 0.0014 35.7 11.8 95 89-187 815-934 (950)
270 2v6y_A AAA family ATPase, P60 64.9 35 0.0012 24.3 8.4 15 170-184 37-51 (83)
271 2w2u_A Hypothetical P60 katani 64.7 8.2 0.00028 27.8 4.2 28 86-113 21-48 (83)
272 4gq2_M Nucleoporin NUP120; bet 63.7 48 0.0016 35.1 11.7 77 87-163 843-948 (950)
273 2crb_A Nuclear receptor bindin 62.8 11 0.00038 27.7 4.5 28 117-144 15-42 (97)
274 2cwy_A Hypothetical protein TT 62.1 19 0.00066 26.4 6.0 55 89-145 6-67 (94)
275 2v6y_A AAA family ATPase, P60 61.3 10 0.00035 27.2 4.2 26 87-112 14-39 (83)
276 1om2_A Protein (mitochondrial 60.6 10 0.00036 28.0 4.2 29 88-116 24-52 (95)
277 3t5v_B Nuclear mRNA export pro 59.0 21 0.00073 34.4 7.3 87 98-184 140-254 (455)
278 1wfd_A Hypothetical protein 15 58.0 51 0.0018 24.0 9.4 36 170-205 41-76 (93)
279 4fhn_B Nucleoporin NUP120; pro 56.6 35 0.0012 36.9 9.3 87 88-174 846-961 (1139)
280 3esl_A Checkpoint serine/threo 56.5 72 0.0024 27.0 9.3 83 117-203 80-164 (202)
281 1qsa_A Protein (soluble lytic 55.0 1.7E+02 0.0059 29.2 13.5 116 62-180 266-410 (618)
282 1om2_A Protein (mitochondrial 54.9 19 0.00066 26.6 4.8 40 155-194 24-63 (95)
283 2vkj_A TM1634; membrane protei 54.7 53 0.0018 23.9 6.9 46 83-128 52-101 (106)
284 3mv2_A Coatomer subunit alpha; 53.5 1.3E+02 0.0044 27.4 11.1 99 87-185 117-241 (325)
285 3t5x_A PCI domain-containing p 52.3 27 0.00093 29.5 6.2 52 83-134 13-70 (203)
286 3mkr_B Coatomer subunit alpha; 51.1 1.4E+02 0.0049 27.0 13.1 98 87-184 105-231 (320)
287 1wfd_A Hypothetical protein 15 50.4 19 0.00065 26.4 4.2 26 87-112 18-43 (93)
288 2v6x_A Vacuolar protein sortin 49.8 20 0.00069 25.6 4.2 26 87-112 16-41 (85)
289 2cpt_A SKD1 protein, vacuolar 48.4 88 0.003 23.8 9.3 36 170-205 44-80 (117)
290 2rpa_A Katanin P60 ATPase-cont 48.2 14 0.00049 26.2 3.0 27 87-113 15-41 (78)
291 3t5x_A PCI domain-containing p 47.9 36 0.0012 28.7 6.3 51 117-167 14-69 (203)
292 2cpt_A SKD1 protein, vacuolar 47.6 21 0.00072 27.4 4.2 23 89-111 23-45 (117)
293 3t5v_B Nuclear mRNA export pro 45.9 46 0.0016 32.0 7.3 63 88-150 180-254 (455)
294 4a1g_A Mitotic checkpoint seri 45.6 1E+02 0.0035 24.7 8.3 49 101-149 82-133 (152)
295 3myv_A SUSD superfamily protei 44.8 41 0.0014 32.1 6.9 30 150-179 189-218 (454)
296 2ijq_A Hypothetical protein; s 44.5 1E+02 0.0036 25.0 8.2 59 121-179 36-103 (161)
297 3mcx_A SUSD superfamily protei 43.7 47 0.0016 31.9 7.1 30 151-180 202-231 (477)
298 3kez_A Putative sugar binding 42.7 45 0.0015 31.9 6.8 29 151-179 196-224 (461)
299 3lpz_A GET4 (YOR164C homolog); 41.7 2.1E+02 0.0071 26.2 11.5 79 83-178 135-214 (336)
300 2v6x_A Vacuolar protein sortin 40.9 93 0.0032 22.0 9.2 31 173-203 42-72 (85)
301 3qnk_A Putative lipoprotein; a 40.9 91 0.0031 30.2 8.7 48 133-180 153-211 (517)
302 2cfu_A SDSA1; SDS-hydrolase, l 39.9 72 0.0025 32.2 8.0 49 118-166 450-498 (658)
303 2ynq_A ESSB; membrane protein, 39.6 1.2E+02 0.0042 24.5 7.7 82 89-176 13-98 (161)
304 2wvi_A Mitotic checkpoint seri 39.4 1.5E+02 0.0052 24.0 9.1 49 101-149 77-128 (164)
305 1wy6_A Hypothetical protein ST 38.9 1.4E+02 0.0047 24.0 7.6 81 60-147 73-155 (172)
306 4ady_A RPN2, 26S proteasome re 38.1 1.9E+02 0.0064 30.6 10.8 117 60-179 386-518 (963)
307 3re2_A Predicted protein; meni 37.4 1.4E+02 0.0047 27.9 8.4 50 147-196 292-347 (472)
308 4a1g_A Mitotic checkpoint seri 37.3 83 0.0028 25.3 6.4 62 135-199 83-146 (152)
309 4aez_C MAD3, mitotic spindle c 37.2 1.2E+02 0.004 26.1 7.7 49 101-149 131-182 (223)
310 3u84_A Menin; MLL, JUND, ledgf 37.0 1.3E+02 0.0046 28.5 8.4 50 147-196 314-369 (550)
311 3jq1_A SUSD superfamily protei 36.8 75 0.0026 30.5 7.3 63 117-179 110-208 (481)
312 3esl_A Checkpoint serine/threo 35.9 1.2E+02 0.004 25.7 7.4 63 86-149 82-147 (202)
313 3lew_A SUSD-like carbohydrate 35.8 67 0.0023 31.0 6.8 31 150-180 202-232 (495)
314 3hdx_A SUSD homolog, SUSD supe 33.5 1.1E+02 0.0039 29.1 8.0 48 133-180 156-226 (478)
315 3re2_A Predicted protein; meni 33.0 49 0.0017 30.8 4.8 43 103-145 276-324 (472)
316 3myv_A SUSD superfamily protei 33.0 92 0.0032 29.6 7.2 25 119-143 192-216 (454)
317 2wpv_A GET4, UPF0363 protein Y 31.7 99 0.0034 28.0 6.7 28 81-108 131-158 (312)
318 3kez_A Putative sugar binding 30.6 96 0.0033 29.5 6.9 28 117-144 196-223 (461)
319 2rpa_A Katanin P60 ATPase-cont 30.4 45 0.0015 23.6 3.3 23 122-144 17-39 (78)
320 3i4g_A SUSD-like carbohydrate 30.0 1.8E+02 0.0062 28.2 8.9 64 117-180 123-227 (528)
321 3mcx_A SUSD superfamily protei 29.2 1.1E+02 0.0037 29.3 7.0 14 117-130 123-136 (477)
322 3u84_A Menin; MLL, JUND, ledgf 27.0 71 0.0024 30.3 4.8 43 103-145 298-346 (550)
323 3lew_A SUSD-like carbohydrate 26.9 1.3E+02 0.0044 29.0 7.1 14 117-130 119-132 (495)
324 3otn_A SUSD superfamily protei 26.5 96 0.0033 29.7 6.1 63 117-179 116-225 (482)
325 2dl1_A Spartin; SPG20, MIT, st 25.8 43 0.0015 25.7 2.6 43 64-116 19-61 (116)
326 3qnk_A Putative lipoprotein; a 25.8 1.2E+02 0.0041 29.3 6.7 30 117-146 182-211 (517)
327 2xtc_A F-box-like/WD repeat-co 25.4 25 0.00084 25.7 1.2 35 316-355 23-57 (90)
328 2ymb_A MITD1, MIT domain-conta 24.5 16 0.00054 32.3 0.0 36 78-113 17-52 (257)
329 2cfu_A SDSA1; SDS-hydrolase, l 24.4 1.6E+02 0.0055 29.6 7.5 50 151-200 449-498 (658)
330 3he4_B Synzip5; heterodimeric 23.7 1.2E+02 0.0042 18.0 3.8 26 8-33 4-29 (46)
331 1kw4_A Polyhomeotic; SAM domai 22.8 78 0.0027 22.8 3.5 33 331-363 18-52 (89)
332 2vkj_A TM1634; membrane protei 22.5 2E+02 0.0069 20.8 5.5 21 124-144 60-80 (106)
333 3jq1_A SUSD superfamily protei 22.4 92 0.0031 29.9 5.1 29 117-145 180-208 (481)
334 3snx_A SUSD homolog, putative 21.8 1.4E+02 0.0048 28.4 6.2 33 148-180 188-220 (460)
335 4b4t_O 26S proteasome regulato 21.7 4.7E+02 0.016 24.0 11.6 89 91-179 83-197 (393)
336 4ady_A RPN2, 26S proteasome re 21.3 4E+02 0.014 28.2 9.7 116 62-178 425-551 (963)
337 2wvi_A Mitotic checkpoint seri 20.6 3.4E+02 0.012 21.9 11.2 67 136-205 79-147 (164)
338 3hdx_A SUSD homolog, SUSD supe 20.2 1.9E+02 0.0066 27.5 6.9 30 117-146 197-226 (478)
339 3snx_A SUSD homolog, putative 20.2 1.7E+02 0.0058 27.8 6.4 28 118-145 192-219 (460)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.86 E-value=4.7e-21 Score=156.12 Aligned_cols=119 Identities=31% Similarity=0.515 Sum_probs=111.3
Q ss_pred hhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH
Q 017383 74 SLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK 152 (372)
Q Consensus 74 al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~ 152 (372)
+..++|. .+..++++|+.|++.|+|++|+.+|+++++++|. +.+|+++|.||..+|++++|+.+|+++++++|+++.
T Consensus 5 ~a~inP~--~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~ 82 (126)
T 4gco_A 5 LAYINPE--LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIK 82 (126)
T ss_dssp --CCCHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHCHH--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhH
Confidence 4457777 5666889999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 153 AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 153 a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
+|+++|.++..+|++++|+.+|+++++++|++.+++..+..+
T Consensus 83 a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~~a~~~l~~~ 124 (126)
T 4gco_A 83 GYIRKAACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNC 124 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCHHHHHHHHHh
Confidence 999999999999999999999999999999999998887765
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.85 E-value=3.1e-21 Score=161.86 Aligned_cols=139 Identities=12% Similarity=0.033 Sum_probs=123.6
Q ss_pred CCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhc
Q 017383 54 PSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR 131 (372)
Q Consensus 54 ~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g 131 (372)
++|..| ..|++++|+..+++++..+|.. ...++.+|.+|+..|+|++|+.+|+++++++|+ +.+|+++|.+|..+|
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~--~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~ 79 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQK--SIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEE 79 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHH--HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCccc--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 467777 6799999999999999999884 444779999999999999999999999999999 999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH-HHHHHccCCCcHHHHHHHHHH
Q 017383 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED-SEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~-~~~al~l~P~~~~~~~~l~~a 194 (372)
++++|+.+|+++++++|+++.+|+++|.++..+|++++|... ++++++++|+++.++.....+
T Consensus 80 ~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~~~~~~l~~~l 143 (150)
T 4ga2_A 80 NTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGSPAVYKLKEQL 143 (150)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999887765 599999999999887665544
No 3
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.79 E-value=1.9e-18 Score=153.44 Aligned_cols=145 Identities=21% Similarity=0.232 Sum_probs=126.4
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHh--------
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL-------- 130 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~-------- 130 (372)
..|++++|+..|++++..+|++..+ +..+|.++...|++++|+.+|+++++++|+ ..++.++|.++..+
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~ 94 (217)
T 2pl2_A 17 ALGRYDAALTLFERALKENPQDPEA--LYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRE 94 (217)
T ss_dssp HTTCHHHHHHHHHHHHTTSSSCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhc
Confidence 6789999999999999999996555 669999999999999999999999999998 99999999999999
Q ss_pred ---cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHH----------HHHHHHH
Q 017383 131 ---RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQ----------LAEVKSL 197 (372)
Q Consensus 131 ---g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~----------l~~a~~~ 197 (372)
|++++|+..|+++++++|+++.+++++|.++..+|++++|+..|++++.++ +++.++.. +.+|...
T Consensus 95 ~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~ 173 (217)
T 2pl2_A 95 RGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQ 173 (217)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 88877544 4455555
Q ss_pred HHHHHHhhhh
Q 017383 198 YEKEVFQKAS 207 (372)
Q Consensus 198 ~~~~~~~~~~ 207 (372)
|++++...|.
T Consensus 174 ~~~al~~~P~ 183 (217)
T 2pl2_A 174 YAKALEQAPK 183 (217)
T ss_dssp HHHHHHHSTT
T ss_pred HHHHHHhCCC
Confidence 5555555543
No 4
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.79 E-value=1e-18 Score=147.03 Aligned_cols=115 Identities=11% Similarity=0.050 Sum_probs=108.8
Q ss_pred HHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 017383 69 SHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLD 147 (372)
Q Consensus 69 ~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~ 147 (372)
..+.+++.++|++ +..++.+|.+++..|+|++|+.+|++++.++|+ +.+|+++|.||..+|+|++|+.+|++|+.++
T Consensus 23 ~~l~~al~l~p~~--~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~ 100 (151)
T 3gyz_A 23 ATLKDINAIPDDM--MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALG 100 (151)
T ss_dssp CCTGGGCCSCHHH--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred CCHHHHhCCCHHH--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 3578889999984 445789999999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcH
Q 017383 148 DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 185 (372)
Q Consensus 148 p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~ 185 (372)
|+++.+|+++|.++..+|++++|+.+|++++.+.|+..
T Consensus 101 P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 101 KNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp SSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 99999999999999999999999999999999999875
No 5
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.79 E-value=6.2e-19 Score=156.68 Aligned_cols=173 Identities=15% Similarity=0.146 Sum_probs=147.4
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHH
Q 017383 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKEL 90 (372)
Q Consensus 12 l~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~ 90 (372)
+...+....+|++++......+...+..... ....|..| ..|++++|+..|+++++++|++..+ +..+
T Consensus 11 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a---------~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a--~~~l 79 (217)
T 2pl2_A 11 LGVQLYALGRYDAALTLFERALKENPQDPEA---------LYWLARTQLKLGLVNPALENGKTLVARTPRYLGG--YMVL 79 (217)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTSSSCHHH---------HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH---------HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH--HHHH
Confidence 3445556678888888888877655511110 01122233 7899999999999999999996555 6799
Q ss_pred HHHHHHh-----------hcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 017383 91 GNECFKQ-----------KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRA 158 (372)
Q Consensus 91 g~~~~~~-----------g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg 158 (372)
|.++... |++++|+.+|+++++++|+ ..++.++|.+|..+|++++|+..|+++++++ +++.+++++|
T Consensus 80 g~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la 158 (217)
T 2pl2_A 80 SEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALA 158 (217)
T ss_dssp HHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHH
T ss_pred HHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHH
Confidence 9999999 9999999999999999999 9999999999999999999999999999999 9999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 159 TARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 159 ~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
.++..+|++++|+..|++++.++|++..++..+..+..
T Consensus 159 ~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~ 196 (217)
T 2pl2_A 159 ELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALL 196 (217)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 99999999999999999999999999998877766543
No 6
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.79 E-value=4.6e-18 Score=145.80 Aligned_cols=150 Identities=17% Similarity=0.197 Sum_probs=134.5
Q ss_pred CCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCH
Q 017383 56 PSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRF 133 (372)
Q Consensus 56 ~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~ 133 (372)
|..| ..|++++|+..|+++++++|++..+ +..+|.+|...|++++|+.++.+++..+|+ ..++..+|.++...+++
T Consensus 12 G~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (184)
T 3vtx_A 12 GDKKRTKGDFDGAIRAYKKVLKADPNNVET--LLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEK 89 (184)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCH
Confidence 3344 6799999999999999999996555 779999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH----------HHHHHHHHHHHHHHH
Q 017383 134 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVF 203 (372)
Q Consensus 134 ~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~~~~~ 203 (372)
+.|+..+.+++.++|.+..++..+|.++..+|++++|+..|+++++++|++..++ +.+.+|...|++++.
T Consensus 90 ~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 169 (184)
T 3vtx_A 90 QAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALE 169 (184)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999886 445555666666665
Q ss_pred hhhh
Q 017383 204 QKAS 207 (372)
Q Consensus 204 ~~~~ 207 (372)
.+|.
T Consensus 170 ~~p~ 173 (184)
T 3vtx_A 170 KEEK 173 (184)
T ss_dssp TTHH
T ss_pred CCcc
Confidence 5543
No 7
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.79 E-value=8.8e-19 Score=146.57 Aligned_cols=131 Identities=12% Similarity=0.052 Sum_probs=118.0
Q ss_pred hHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017383 67 PVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 67 A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~ 145 (372)
+-..|++++.++|. ....++.+|.+++..|+|++|+.+|++++.++|+ +.+|+++|.+|..+|++++|+.+|++++.
T Consensus 6 ~~~~~~~al~~~p~--~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 6 GGGTIAMLNEISSD--TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp CCCSHHHHTTCCHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHh--hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 34568999999988 4555779999999999999999999999999998 99999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHH
Q 017383 146 LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (372)
Q Consensus 146 l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (372)
++|+++.+++++|.++..+|++++|+.+|++++.++|+++........+...+.
T Consensus 84 l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 137 (148)
T 2vgx_A 84 MDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANXPEFXELSTRVSSMLE 137 (148)
T ss_dssp HSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCCcchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998776555555554443
No 8
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.78 E-value=1.6e-18 Score=180.34 Aligned_cols=137 Identities=25% Similarity=0.276 Sum_probs=128.0
Q ss_pred CCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCH
Q 017383 56 PSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRF 133 (372)
Q Consensus 56 ~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~ 133 (372)
|..| .+|++++|+.+|+++++++|++..+ +.++|.+|..+|++++|+.+|+++++++|+ +.+|+++|.+|..+|++
T Consensus 16 G~~~~~~G~~~eAi~~~~kAl~l~P~~~~a--~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~ 93 (723)
T 4gyw_A 16 ANIKREQGNIEEAVRLYRKALEVFPEFAAA--HSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDV 93 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH
Confidence 3344 7899999999999999999995555 779999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 134 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 134 ~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
++|+.+|++|++++|+++.+|+++|.++..+|++++|+.+|+++++++|++..++..+..+
T Consensus 94 ~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~ 154 (723)
T 4gyw_A 94 QGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHC 154 (723)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhH
Confidence 9999999999999999999999999999999999999999999999999999987665544
No 9
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.78 E-value=2.4e-18 Score=166.43 Aligned_cols=136 Identities=14% Similarity=0.068 Sum_probs=127.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhc-HHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK-FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~-~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~ 137 (372)
..|++++|+..|++++.++|.+..+ |+.+|.++...|+ |++|+.+|++++.++|+ ..+|+++|.++..+|++++|+
T Consensus 109 ~~g~~~~Al~~~~~al~l~P~~~~a--~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl 186 (382)
T 2h6f_A 109 RDERSERAFKLTRDAIELNAANYTV--WHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQEL 186 (382)
T ss_dssp HTCCCHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHH
T ss_pred HCCChHHHHHHHHHHHHhCccCHHH--HHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHH
Confidence 4588999999999999999995555 7799999999997 99999999999999999 999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHH
Q 017383 138 DDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSL 197 (372)
Q Consensus 138 ~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~ 197 (372)
.+|++||.++|++..+|+++|.++..+|++++|+.+|++++.++|++..++..++.+...
T Consensus 187 ~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 187 EFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998777666443
No 10
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.78 E-value=1.6e-18 Score=148.69 Aligned_cols=165 Identities=19% Similarity=0.238 Sum_probs=143.3
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHH
Q 017383 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (372)
Q Consensus 11 ~l~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~ 89 (372)
.++......++|+++++..++.+...+.... +...+|..| ..|++++|+..+.+++...|....+ +..
T Consensus 10 ~lG~~~~~~g~~~~A~~~~~~al~~~p~~~~---------~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~--~~~ 78 (184)
T 3vtx_A 10 DIGDKKRTKGDFDGAIRAYKKVLKADPNNVE---------TLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEA--YYI 78 (184)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHH--HHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHH--HHH
Confidence 4566677788999999988888876652111 011223334 7899999999999999999985555 669
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHH
Q 017383 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (372)
Q Consensus 90 ~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~ 168 (372)
+|.++...++++.|+.++.+++.++|. ..++..+|.+|..+|++++|+.+|+++++++|+++.+|+++|.++..+|+++
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~ 158 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRD 158 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCcHH
Q 017383 169 ESIEDSEFALRLEPQNQE 186 (372)
Q Consensus 169 ~A~~~~~~al~l~P~~~~ 186 (372)
+|+.+|+++++++|++..
T Consensus 159 ~A~~~~~~al~~~p~~a~ 176 (184)
T 3vtx_A 159 EAVKYFKKALEKEEKKAK 176 (184)
T ss_dssp HHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHhCCccCHH
Confidence 999999999999998653
No 11
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.77 E-value=8.4e-19 Score=147.61 Aligned_cols=118 Identities=20% Similarity=0.175 Sum_probs=108.6
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc---
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------------AVAYANRAMAYLKLRRFQEAEDDCTEALNL--- 146 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------------~~~~~~la~~~~~~g~~~eA~~~~~~Al~l--- 146 (372)
.+..++++|+.++..|+|++|+.+|+++|+++|+ +.+|.|+|.|+..+|+|++|+.+|++||.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 4566889999999999999999999999999987 239999999999999999999999999999
Q ss_pred ----CCCCHHHH----HHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHH
Q 017383 147 ----DDRYIKAY----SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (372)
Q Consensus 147 ----~p~~~~a~----~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 200 (372)
+|++..+| +++|.++..+|++++|+.+|++++.++|++..+...+..+......
T Consensus 90 ~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~~~~ 151 (159)
T 2hr2_A 90 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEVAID 151 (159)
T ss_dssp HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 99999999 9999999999999999999999999999998887777777665543
No 12
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.76 E-value=9.5e-18 Score=136.46 Aligned_cols=110 Identities=30% Similarity=0.450 Sum_probs=99.7
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-------HHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY-------IKAY 154 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~-------~~a~ 154 (372)
.+.+++++|+.+++.|+|++|+.+|+++|+++|+ +.+|.++|.||+.+|+|++|+.+|++++.++|++ +.+|
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 4667889999999999999999999999999999 9999999999999999999999999999998876 4689
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHH
Q 017383 155 SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAE 193 (372)
Q Consensus 155 ~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~ 193 (372)
+++|.++..+|++++|+.+|++++.+.|+ ++....+.+
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~ 124 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHRSLSEFRD-PELVKKVKE 124 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSCC-HHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCcC-HHHHHHHHH
Confidence 99999999999999999999999999886 444444433
No 13
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.76 E-value=1.5e-17 Score=140.30 Aligned_cols=118 Identities=32% Similarity=0.439 Sum_probs=108.5
Q ss_pred chHHHHHHHHHHHHHhhcHHHHHHHHHHHHcc------------------CCC-HHHHHHHHHHHHHhcCHHHHHHHHHH
Q 017383 82 PDATSEKELGNECFKQKKFKEAIDCYSRSIAL------------------SPT-AVAYANRAMAYLKLRRFQEAEDDCTE 142 (372)
Q Consensus 82 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~------------------~p~-~~~~~~la~~~~~~g~~~eA~~~~~~ 142 (372)
..+..++.+|+.++..|+|++|+.+|.+++.+ +|. ..+|+++|.||+.+|+|++|+.+|++
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 35667899999999999999999999999999 666 78999999999999999999999999
Q ss_pred HHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcH-HHHHHHHHHHHHHH
Q 017383 143 ALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ-EIKKQLAEVKSLYE 199 (372)
Q Consensus 143 Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~-~~~~~l~~a~~~~~ 199 (372)
++.++|+++.+|+++|.++..+|++++|+.+|++++.++|++. .+...+..+....+
T Consensus 89 al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~ 146 (162)
T 3rkv_A 89 VLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRA 146 (162)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 66777777665544
No 14
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.75 E-value=1.1e-17 Score=138.35 Aligned_cols=129 Identities=14% Similarity=0.071 Sum_probs=114.8
Q ss_pred HHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Q 017383 69 SHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLD 147 (372)
Q Consensus 69 ~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~ 147 (372)
..|.+++..+|. ....++.+|..++..|+|++|+.+|++++.++|+ ..+|+++|.+|..+|++++|+.+|++++.++
T Consensus 5 ~~l~~al~~~p~--~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 82 (142)
T 2xcb_A 5 GTLAMLRGLSED--TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMD 82 (142)
T ss_dssp ----CCTTCCHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hhHHHHHcCCHH--HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 467889999988 4455779999999999999999999999999998 9999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHH
Q 017383 148 DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (372)
Q Consensus 148 p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (372)
|+++.+++++|.++..+|++++|+.+|++++.++|+++........+...+.
T Consensus 83 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~l~ 134 (142)
T 2xcb_A 83 INEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLE 134 (142)
T ss_dssp TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCGGGHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998877666666655544
No 15
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.75 E-value=2.5e-17 Score=132.70 Aligned_cols=114 Identities=29% Similarity=0.474 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
.+..++.+|..++..|+|++|+.+|++++.++|+ +.+|.++|.+|..+|++++|+.+|++++.++|+++.+|+++|.++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQ 82 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 4566889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHccC------CCcHHHHHHHHHHHH
Q 017383 162 KELGKLKESIEDSEFALRLE------PQNQEIKKQLAEVKS 196 (372)
Q Consensus 162 ~~lg~~~~A~~~~~~al~l~------P~~~~~~~~l~~a~~ 196 (372)
..+|++++|+.+|++++.++ |++..++..+..+..
T Consensus 83 ~~~~~~~~A~~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~ 123 (126)
T 3upv_A 83 IAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKASQ 123 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHH
T ss_pred HHHhCHHHHHHHHHHHHHhCcccCCchhHHHHHHHHHHHHH
Confidence 99999999999999999999 999888887777654
No 16
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.75 E-value=1.3e-17 Score=148.17 Aligned_cols=127 Identities=18% Similarity=0.181 Sum_probs=93.9
Q ss_pred CCCCchhhHHHHHhhhhcCC-CCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEE-STPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p-~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~ 137 (372)
..|++++|+..|++++..+| .+. ..++.+|.+++..|+|++|+.+|++++.++|+ ..++.++|.+|..+|++++|+
T Consensus 19 ~~~~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~ 96 (228)
T 4i17_A 19 NAKNYAVAFEKYSEYLKLTNNQDS--VTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYI 96 (228)
T ss_dssp HTTCHHHHHHHHHHHHHHTTTCCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HccCHHHHHHHHHHHHhccCCCCc--HHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHH
Confidence 56777777777777777776 433 33556777777777777777777777777777 777777777777777777777
Q ss_pred HHHHHHHhcCCCCH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC--cHHHH
Q 017383 138 DDCTEALNLDDRYI-------KAYSRRATARKELGKLKESIEDSEFALRLEPQ--NQEIK 188 (372)
Q Consensus 138 ~~~~~Al~l~p~~~-------~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~--~~~~~ 188 (372)
..|++++.++|++. .+|+.+|.++..+|++++|+..|++++.++|+ +..++
T Consensus 97 ~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 156 (228)
T 4i17_A 97 ATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWKTDAL 156 (228)
T ss_dssp HHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCcccHHHH
Confidence 77777777777776 55777777777777777777777777777777 65554
No 17
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.74 E-value=9.3e-17 Score=142.54 Aligned_cols=124 Identities=18% Similarity=0.268 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCC-C-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSP-T-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 84 a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p-~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
+..++.+|.+++..|+|++|+.+|++++.++| . ..+++++|.++..+|++++|+.+|++++.++|++..+++.+|.++
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 86 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAY 86 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 35577899999999999999999999999997 5 888888999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHccCCCcHH-------HH----------HHHHHHHHHHHHHHHhhhh
Q 017383 162 KELGKLKESIEDSEFALRLEPQNQE-------IK----------KQLAEVKSLYEKEVFQKAS 207 (372)
Q Consensus 162 ~~lg~~~~A~~~~~~al~l~P~~~~-------~~----------~~l~~a~~~~~~~~~~~~~ 207 (372)
..+|++++|+..|++++.++|++.. ++ +.+.+|...|++++...+.
T Consensus 87 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 87 RDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999998873 22 4566777778877777665
No 18
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.73 E-value=8.7e-18 Score=162.56 Aligned_cols=172 Identities=9% Similarity=0.046 Sum_probs=143.3
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCC-chhhHHHHHhhhhcCCCCchHHHHHHHH
Q 017383 14 GFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSR-NYDPVSHISSSLMNEESTPDATSEKELG 91 (372)
Q Consensus 14 ~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~-~~~A~~~~~~al~~~p~~~~a~~~~~~g 91 (372)
..+...+++++++...++.+...+....-. ...|..| .+|+ +++|+.+|++++.++|++..+ |+.+|
T Consensus 105 ~~~~~~g~~~~Al~~~~~al~l~P~~~~a~---------~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a--~~~~g 173 (382)
T 2h6f_A 105 AVLQRDERSERAFKLTRDAIELNAANYTVW---------HFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQV--WHHRR 173 (382)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHCTTCHHHH---------HHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHH--HHHHH
T ss_pred HHHHHCCChHHHHHHHHHHHHhCccCHHHH---------HHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHH--HHHHH
Confidence 334445668888888888876665211111 1112223 6785 999999999999999995555 77999
Q ss_pred HHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH-cCCHHH
Q 017383 92 NECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE-LGKLKE 169 (372)
Q Consensus 92 ~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~-lg~~~~ 169 (372)
.++...|+|++|+.+|+++|+++|+ ..+|+++|.++..+|++++|+.+|+++|.++|++..+|+++|.++.. .|.+++
T Consensus 174 ~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~~~a~~~lg~~l~~l~~~~~e 253 (382)
T 2h6f_A 174 VLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDR 253 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCSCSH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCcchH
Confidence 9999999999999999999999998 99999999999999999999999999999999999999999999999 555588
Q ss_pred H-----HHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 170 S-----IEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 170 A-----~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
| +.+|++++.++|++..++..+..+..
T Consensus 254 A~~~~el~~~~~Al~l~P~~~~a~~~l~~ll~ 285 (382)
T 2h6f_A 254 AVLEREVQYTLEMIKLVPHNESAWNYLKGILQ 285 (382)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 8 59999999999999998877765543
No 19
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.73 E-value=8.6e-17 Score=141.77 Aligned_cols=147 Identities=12% Similarity=0.020 Sum_probs=117.7
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHH----------------HHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKE----------------LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 122 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~----------------~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~ 122 (372)
..|++++|+..|++++..+|+++.+ ++. +|.+|...|+|++|+.+|+++++++|+ ..++++
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~--~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 93 (208)
T 3urz_A 16 EAGQNGQAVSYFRQTIALNIDRTEM--YYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEA 93 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCHHHHHH--HHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHhCCCChHH--HHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6799999999999999999985555 556 999999999999999999999999998 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHccCCCcHHH---------HHHH
Q 017383 123 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK--LKESIEDSEFALRLEPQNQEI---------KKQL 191 (372)
Q Consensus 123 la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~--~~~A~~~~~~al~l~P~~~~~---------~~~l 191 (372)
+|.+|..+|++++|+.+|+++++++|+++.+|+++|.+|...|+ ...+...|.+++...|..... .+.+
T Consensus 94 lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~ 173 (208)
T 3urz_A 94 CAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRY 173 (208)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCH
Confidence 99999999999999999999999999999999999998876654 345566666665443322111 1345
Q ss_pred HHHHHHHHHHHHhhhhh
Q 017383 192 AEVKSLYEKEVFQKASK 208 (372)
Q Consensus 192 ~~a~~~~~~~~~~~~~~ 208 (372)
.+|...|++++...|..
T Consensus 174 ~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 174 EKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHHhCCCH
Confidence 66666666666666543
No 20
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.72 E-value=7.8e-18 Score=175.23 Aligned_cols=163 Identities=17% Similarity=0.183 Sum_probs=142.8
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHH
Q 017383 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (372)
Q Consensus 11 ~l~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~ 89 (372)
.|...+..+++++++++...+.+...+... .+...+|..| .+|++++|+..|+++++++|++..+ +++
T Consensus 14 nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~---------~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a--~~n 82 (723)
T 4gyw_A 14 NLANIKREQGNIEEAVRLYRKALEVFPEFA---------AAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADA--YSN 82 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCCH---------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH--HHH
Confidence 456677788899999999888887665111 0112334445 7899999999999999999995555 779
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHH
Q 017383 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (372)
Q Consensus 90 ~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~ 168 (372)
+|.+|..+|++++|+.+|+++++++|+ +.+|+++|.+|..+|++++|+.+|++|++++|+++.+++++|.++..+|+++
T Consensus 83 Lg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~ 162 (723)
T 4gyw_A 83 MGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWT 162 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCc
Q 017383 169 ESIEDSEFALRLEPQN 184 (372)
Q Consensus 169 ~A~~~~~~al~l~P~~ 184 (372)
+|...|++++.+.|+.
T Consensus 163 ~A~~~~~kal~l~~~~ 178 (723)
T 4gyw_A 163 DYDERMKKLVSIVADQ 178 (723)
T ss_dssp THHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhChhH
Confidence 9999999999987654
No 21
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.71 E-value=2.8e-17 Score=156.04 Aligned_cols=139 Identities=27% Similarity=0.317 Sum_probs=128.0
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-H---------------HHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A---------------VAYANR 123 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~---------------~~~~~l 123 (372)
.++++++|+..|.+++..+|. .+..++.+|++|+..|+|++|+.+|++++.++|. . .+|.++
T Consensus 125 ~L~~~~~A~~~~~~a~~~~p~--~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nl 202 (336)
T 1p5q_A 125 HLKSFEKAKESWEMNSEEKLE--QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNL 202 (336)
T ss_dssp EEEEEECCCCGGGCCHHHHHH--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred EEeecccccchhcCCHHHHHH--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHH
Confidence 567888999999999988877 5666889999999999999999999999999987 3 899999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHH
Q 017383 124 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (372)
Q Consensus 124 a~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 200 (372)
|.||+.+|+|++|+.+|++|+.++|+++.+|+++|.++..+|++++|+.+|++++.++|++..++..+..+....++
T Consensus 203 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 279 (336)
T 1p5q_A 203 AMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRR 279 (336)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888777665544
No 22
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.71 E-value=2.2e-16 Score=133.35 Aligned_cols=107 Identities=28% Similarity=0.440 Sum_probs=102.5
Q ss_pred chHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Q 017383 82 PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA 160 (372)
Q Consensus 82 ~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~ 160 (372)
..+..++.+|.+++..|+|++|+.+|++++.++|+ ..+|+++|.+|+.+|+|++|+.+|++++.++|++..+|+++|.+
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 88 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLA 88 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 35677889999999999999999999999999998 99999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHccCCCcHHHH
Q 017383 161 RKELGKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 161 ~~~lg~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
+..+|++++|+.+|++++.++|++..++
T Consensus 89 ~~~~g~~~~A~~~~~~al~~~p~~~~~~ 116 (164)
T 3sz7_A 89 RFDMADYKGAKEAYEKGIEAEGNGGSDA 116 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHSSSCCHH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCchHHH
Confidence 9999999999999999999999997744
No 23
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.70 E-value=4.9e-17 Score=161.58 Aligned_cols=137 Identities=16% Similarity=0.116 Sum_probs=86.7
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHh---------hcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ---------KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLK 129 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~---------g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~ 129 (372)
..|++++|+.+|++++.++|+ ..++..+|.++... |+|++|+.+|+++++++|+ ..+|+++|.+|..
T Consensus 149 ~~g~~~~A~~~~~~al~~~p~---~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~ 225 (474)
T 4abn_A 149 KKGDVTSAHTCFSGALTHCKN---KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLS 225 (474)
T ss_dssp HHTCHHHHHHHHHHHHTTCCC---HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCCC---HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 456666666666666666655 23455666666666 6666666666666666666 6666666666666
Q ss_pred h--------cCHHHHHHHHHHHHhcCC---CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH
Q 017383 130 L--------RRFQEAEDDCTEALNLDD---RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLY 198 (372)
Q Consensus 130 ~--------g~~~eA~~~~~~Al~l~p---~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~ 198 (372)
+ |++++|+.+|++|+.++| +++.+|+++|.++..+|++++|+.+|++++.++|++..++..+..+...+
T Consensus 226 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~l 305 (474)
T 4abn_A 226 LYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFL 305 (474)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 6 666666666666666666 66666666666666666666666666666666666666655555554443
Q ss_pred H
Q 017383 199 E 199 (372)
Q Consensus 199 ~ 199 (372)
+
T Consensus 306 g 306 (474)
T 4abn_A 306 S 306 (474)
T ss_dssp H
T ss_pred H
Confidence 3
No 24
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.70 E-value=3.6e-16 Score=133.27 Aligned_cols=128 Identities=16% Similarity=0.173 Sum_probs=115.9
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHH-HHHhcCH--H
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMA-YLKLRRF--Q 134 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~-~~~~g~~--~ 134 (372)
+..|++++|+..|.+++..+|.+.. .+..+|.+|+..|+|++|+.+|++++.++|+ ..++.++|.+ +...|++ +
T Consensus 21 ~~~~~~~~A~~~~~~al~~~p~~~~--~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~ 98 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRANPQNSE--QWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTA 98 (177)
T ss_dssp C-----CCCCHHHHHHHHHCCSCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCH
T ss_pred hhccCHHHHHHHHHHHHHhCCCcHH--HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchH
Confidence 4789999999999999999998554 4779999999999999999999999999998 9999999999 8899999 9
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH
Q 017383 135 EAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 135 eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
+|+..|++++.++|++..+++.+|.++..+|++++|+..|++++.++|++....
T Consensus 99 ~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 152 (177)
T 2e2e_A 99 QTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPRINRT 152 (177)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHH
Confidence 999999999999999999999999999999999999999999999999886544
No 25
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.69 E-value=1.8e-16 Score=138.10 Aligned_cols=139 Identities=24% Similarity=0.247 Sum_probs=121.6
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-H----------------HHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A----------------VAYAN 122 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~----------------~~~~~ 122 (372)
..|+++.|.+.+.......+. .+..++.+|..++..|+|++|+.+|.+++.+.|. . .++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (198)
T 2fbn_A 16 NLYFQGAKKSIYDYTDEEKVQ--SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLN 93 (198)
T ss_dssp ------CCCSGGGCCHHHHHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hhhhccccCchhhCCHHHHHH--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHH
Confidence 568888888888877665544 5666889999999999999999999999999887 5 89999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHH
Q 017383 123 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (372)
Q Consensus 123 la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 200 (372)
+|.||+.+|+|++|+.+|++++.++|.+..+++++|.++..+|++++|+.+|++++.++|++..++..+..+...+++
T Consensus 94 la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~ 171 (198)
T 2fbn_A 94 LATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKE 171 (198)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999888888776654
No 26
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.69 E-value=1.6e-16 Score=150.64 Aligned_cols=131 Identities=17% Similarity=0.189 Sum_probs=119.6
Q ss_pred CCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhc
Q 017383 54 PSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR 131 (372)
Q Consensus 54 ~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g 131 (372)
.+|..| ..|++++|+..|++++..+|....+..+..+|.+|...|++++|+.+|+++++++|+ ..+|.++|.+|..+|
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g 261 (365)
T 4eqf_A 182 RMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGD 261 (365)
T ss_dssp -------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 345555 789999999999999999998555566889999999999999999999999999998 999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
++++|+..|++++.++|+++.+++++|.++..+|++++|+..|++++.+.|++
T Consensus 262 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 262 RSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999999999999999999999999999999874
No 27
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.68 E-value=5.7e-17 Score=160.40 Aligned_cols=139 Identities=25% Similarity=0.333 Sum_probs=124.2
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC----------------HHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----------------AVAYANR 123 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~----------------~~~~~~l 123 (372)
.++++++|+..|..++...|. .+..++.+|+.++..|+|++|+.+|++++.++|. ..+|+++
T Consensus 246 ~l~~~~~A~~~~~~~~~~~~~--~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nl 323 (457)
T 1kt0_A 246 TLKSFEKAKESWEMDTKEKLE--QAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNL 323 (457)
T ss_dssp EEEEEECCCCGGGSCHHHHHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred hhhhcccCcchhhcCHHHHHH--HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHH
Confidence 557888899999999888876 5666889999999999999999999999999886 3889999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHH
Q 017383 124 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (372)
Q Consensus 124 a~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 200 (372)
|.||+++|+|++|+.+|++|+.++|++..+|+++|.+|..+|++++|+.+|++++.++|++..++..+..+...+++
T Consensus 324 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~ 400 (457)
T 1kt0_A 324 AMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKE 400 (457)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888888776654
No 28
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.68 E-value=2.7e-16 Score=156.25 Aligned_cols=148 Identities=14% Similarity=0.168 Sum_probs=136.0
Q ss_pred CCCCc-hhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHh--------
Q 017383 60 SYSRN-YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKL-------- 130 (372)
Q Consensus 60 ~~g~~-~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~-------- 130 (372)
..|++ ++|+.+|+++++.+|.+..+ ++.+|.+|+..|+|++|+.+|+++++++|+..++.++|.+|..+
T Consensus 114 ~~g~~~~~A~~~~~~al~~~p~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~ 191 (474)
T 4abn_A 114 VTPDYSPEAEVLLSKAVKLEPELVEA--WNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEH 191 (474)
T ss_dssp SSSSCCHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCSCHHHH
T ss_pred hccccHHHHHHHHHHHHhhCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccCChhhh
Confidence 78999 99999999999999995554 77999999999999999999999999999999999999999999
Q ss_pred -cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHccCC---CcHHHH----------
Q 017383 131 -RRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL--------GKLKESIEDSEFALRLEP---QNQEIK---------- 188 (372)
Q Consensus 131 -g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~l--------g~~~~A~~~~~~al~l~P---~~~~~~---------- 188 (372)
|++++|+..|++++.++|++..+|+++|.++..+ |++++|+.+|++++.++| ++..++
T Consensus 192 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~ 271 (474)
T 4abn_A 192 SRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYE 271 (474)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999 999999999999999999 888775
Q ss_pred HHHHHHHHHHHHHHHhhhhhH
Q 017383 189 KQLAEVKSLYEKEVFQKASKT 209 (372)
Q Consensus 189 ~~l~~a~~~~~~~~~~~~~~~ 209 (372)
+.+.+|...|++++...+...
T Consensus 272 g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 272 ESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp TCHHHHHHHHHHHHHHCTTCH
T ss_pred CCHHHHHHHHHHHHHhCCCCH
Confidence 556777788888877766544
No 29
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.68 E-value=3.5e-16 Score=149.69 Aligned_cols=166 Identities=24% Similarity=0.262 Sum_probs=94.4
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHH
Q 017383 11 DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (372)
Q Consensus 11 ~l~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~ 89 (372)
.+...+..+.+|+++++...+.+...+.... ....+|..| ..|++++|+..|++++..+|....+ +..
T Consensus 140 ~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~---------~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~ 208 (388)
T 1w3b_A 140 DLGNLLKALGRLEEAKACYLKAIETQPNFAV---------AWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDA--YIN 208 (388)
T ss_dssp HHHHHHHTTSCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHH--HHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHH--HHH
Confidence 3455556666777777666665544431100 001112222 4566666666666666666653333 445
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHH
Q 017383 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (372)
Q Consensus 90 ~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~ 168 (372)
+|.++...|++++|+.+|.+++.++|+ ..++.++|.+|...|++++|+..|++++.++|+++.+++.+|.++...|+++
T Consensus 209 lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~ 288 (388)
T 1w3b_A 209 LGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVA 288 (388)
T ss_dssp HHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Confidence 666666666666666666666666665 5556666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHHHccCCCcHHH
Q 017383 169 ESIEDSEFALRLEPQNQEI 187 (372)
Q Consensus 169 ~A~~~~~~al~l~P~~~~~ 187 (372)
+|+..|++++.+.|++..+
T Consensus 289 ~A~~~~~~al~~~p~~~~~ 307 (388)
T 1w3b_A 289 EAEDCYNTALRLCPTHADS 307 (388)
T ss_dssp HHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHHhhCcccHHH
Confidence 6666666666666655554
No 30
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.68 E-value=2.6e-16 Score=150.67 Aligned_cols=186 Identities=16% Similarity=0.127 Sum_probs=154.2
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHH
Q 017383 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKEL 90 (372)
Q Consensus 12 l~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~ 90 (372)
+...+...++|+++++.....+...+.... . ...+|..| ..|++++|+..|.+++..+|.... ++..+
T Consensus 107 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~-~--------~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~--~~~~l 175 (388)
T 1w3b_A 107 LAAALVAAGDMEGAVQAYVSALQYNPDLYC-V--------RSDLGNLLKALGRLEEAKACYLKAIETQPNFAV--AWSNL 175 (388)
T ss_dssp HHHHHHHHSCSSHHHHHHHHHHHHCTTCTH-H--------HHHHHHHHHTTSCHHHHHHHHHHHHHHCTTCHH--HHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-H--------HHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHH--HHHHH
Confidence 444555667778888877777655541110 0 01223334 679999999999999999998544 47799
Q ss_pred HHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHH
Q 017383 91 GNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKE 169 (372)
Q Consensus 91 g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~ 169 (372)
|.++...|++++|+.+|++++.++|+ ..++.++|.++...|++++|+..|.+++.++|++..+++++|.++...|++++
T Consensus 176 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 255 (388)
T 1w3b_A 176 GCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDL 255 (388)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCcHHHH----------HHHHHHHHHHHHHHHhhhhh
Q 017383 170 SIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQKASK 208 (372)
Q Consensus 170 A~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~~~~~~~~~~ 208 (372)
|+..|++++.++|+++.++ +.+.+|...|++++...+..
T Consensus 256 A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 304 (388)
T 1w3b_A 256 AIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTH 304 (388)
T ss_dssp HHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc
Confidence 9999999999999998775 44566777777777766544
No 31
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.67 E-value=8.7e-16 Score=139.36 Aligned_cols=126 Identities=13% Similarity=0.072 Sum_probs=116.0
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCch-HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC----HHHHHHHHHHHHH----
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLK---- 129 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~-a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~~la~~~~~---- 129 (372)
+..|++++|+..|++++...|.++. ..+++.+|.+|+..|+|++|+.+|++++.++|+ ..+++++|.+++.
T Consensus 26 ~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~ 105 (261)
T 3qky_A 26 YNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPP 105 (261)
T ss_dssp HHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCC
T ss_pred HHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccc
Confidence 3779999999999999999998633 455889999999999999999999999999885 7889999999999
Q ss_pred ----hcCHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 130 ----LRRFQEAEDDCTEALNLDDRYIKAY-----------------SRRATARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 130 ----~g~~~eA~~~~~~Al~l~p~~~~a~-----------------~~lg~~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
+|++++|+..|++++.++|++..+. +.+|.+|..+|++++|+..|++++...|++
T Consensus 106 ~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 106 YELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred ccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999986555 889999999999999999999999999984
No 32
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.67 E-value=2.7e-16 Score=127.74 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=95.3
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHH
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~ 137 (372)
|..|+|++|+..|+++++++|.+..+ +.++|.+|+..|++++|+.+|+++++++|+ ..+|+++|.+|..+|++++|+
T Consensus 24 ~~~g~~~~A~~~~~~al~~~p~~~~~--~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~ 101 (126)
T 4gco_A 24 FKKGDYPTAMRHYNEAVKRDPENAIL--YSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQ 101 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHHH--HHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHH
Confidence 47899999999999999999995554 779999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 138 DDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 138 ~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
.+|+++++++|++..++..++.++
T Consensus 102 ~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 102 RAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999998764
No 33
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.67 E-value=1.1e-15 Score=136.57 Aligned_cols=173 Identities=17% Similarity=0.212 Sum_probs=140.7
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCc--h---HH
Q 017383 12 FQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTP--D---AT 85 (372)
Q Consensus 12 l~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~--~---a~ 85 (372)
+...+-...+|++++....+.+... .... ....+|..| ..|++++|+..|.+++..+|... . +.
T Consensus 11 ~g~~~~~~~~~~~A~~~~~~a~~~~-~~~~---------~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 80 (258)
T 3uq3_A 11 EGNKFYKARQFDEAIEHYNKAWELH-KDIT---------YLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISK 80 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHS-CCTH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhh-ccHH---------HHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHH
Confidence 4455556678888888777766443 1110 001122333 78999999999999999887641 1 56
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHc--------------------------cCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 86 SEKELGNECFKQKKFKEAIDCYSRSIA--------------------------LSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 86 ~~~~~g~~~~~~g~~~~Ai~~y~~al~--------------------------~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
.+..+|.++...|++++|+.+|++++. .+|. ..++.++|.++...|++++|+.
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 160 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVK 160 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHH
Confidence 688999999999999999999999999 5565 7889999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
.|++++.++|.+..+++.+|.++..+|++++|+..|++++.++|++..++..++.+
T Consensus 161 ~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 216 (258)
T 3uq3_A 161 AYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATA 216 (258)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998876444443
No 34
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.67 E-value=5.2e-16 Score=138.62 Aligned_cols=132 Identities=25% Similarity=0.402 Sum_probs=116.6
Q ss_pred CCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHH
Q 017383 61 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDD 139 (372)
Q Consensus 61 ~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~ 139 (372)
.|++++|+..+.+++..+|. ....+..+|.+++..|+|++|+.+|++++..+|. ..++.++|.++..+|++++|+.+
T Consensus 118 ~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 195 (258)
T 3uq3_A 118 LRNAEKELKKAEAEAYVNPE--KAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIAD 195 (258)
T ss_dssp HHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHcCcc--hHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHH
Confidence 34455555555555557766 4556789999999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC------CCcHHHHHHHHHH
Q 017383 140 CTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLE------PQNQEIKKQLAEV 194 (372)
Q Consensus 140 ~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~------P~~~~~~~~l~~a 194 (372)
|++++.++|+++.+++.+|.++..+|++++|+..|++++.++ |++..++..+.++
T Consensus 196 ~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 196 CNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999 9988887776654
No 35
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.67 E-value=3.1e-15 Score=126.38 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=123.7
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|++++..+|.. ...+..+|.+++..|++++|+.+|++++..+|. ..++.++|.++...|++++|+.
T Consensus 20 ~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 97 (186)
T 3as5_A 20 KAGRYSQAVMLLEQVYDADAFD--VDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVP 97 (186)
T ss_dssp HHTCHHHHHHHHTTTCCTTSCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCccC--hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHH
Confidence 5689999999999999999885 455779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~ 195 (372)
.+++++..+|.+..+++.+|.++...|++++|+..|++++...|.+..++..+..+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 154 (186)
T 3as5_A 98 LLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSY 154 (186)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987765554443
No 36
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.66 E-value=1.9e-15 Score=136.81 Aligned_cols=132 Identities=10% Similarity=0.066 Sum_probs=121.5
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC----HHHHHHHHHHHHHhcCHH
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQ 134 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~~la~~~~~~g~~~ 134 (372)
+..|++++|+..|++++..+|.+..+ +..+|.+++..|+|++|+.+|++++...++ ..+|.++|.++..+|+++
T Consensus 14 ~~~~~~~~A~~~~~~~l~~~p~~~~~--~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~ 91 (272)
T 3u4t_A 14 FKNNNYAEAIEVFNKLEAKKYNSPYI--YNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDS 91 (272)
T ss_dssp HTTTCHHHHHHHHHHHHHTTCCCSTT--HHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcHHH--HHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHH
Confidence 37899999999999999999986665 669999999999999999999999994333 667999999999999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHH
Q 017383 135 EAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 192 (372)
Q Consensus 135 eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 192 (372)
+|+.+|++++.++|.+..++..+|.++..+|++++|+.+|++++.++|.+..++..++
T Consensus 92 ~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~ 149 (272)
T 3u4t_A 92 LAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELG 149 (272)
T ss_dssp HHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988876655
No 37
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.66 E-value=8.6e-16 Score=145.11 Aligned_cols=145 Identities=18% Similarity=0.203 Sum_probs=131.5
Q ss_pred CCCCCCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCH
Q 017383 55 SPSGNSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRF 133 (372)
Q Consensus 55 ~~~~y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~ 133 (372)
+|..+..|++++|+..|.+++..+|....+..+..+|.++...|++++|+.+|++++.++|. ..++.++|.++..+|++
T Consensus 188 ~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~ 267 (368)
T 1fch_A 188 LGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQS 267 (368)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCH
Confidence 44445779999999999999999998555666889999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc-----------HHHHHHHHHHHHHHH
Q 017383 134 QEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN-----------QEIKKQLAEVKSLYE 199 (372)
Q Consensus 134 ~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~-----------~~~~~~l~~a~~~~~ 199 (372)
++|+..|++++.++|++..+++.+|.++..+|++++|+..|++++.+.|++ ..++..+..+....+
T Consensus 268 ~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 344 (368)
T 1fch_A 268 EEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLG 344 (368)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999999999999999988 677777766655443
No 38
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.65 E-value=8.4e-16 Score=145.67 Aligned_cols=164 Identities=12% Similarity=0.067 Sum_probs=95.2
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHH
Q 017383 14 GFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGN 92 (372)
Q Consensus 14 ~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~ 92 (372)
..+-...+|++++......+...+.... ....+|..| ..|++++|+..|++++..+|.+..+ +..+|.
T Consensus 73 ~~~~~~g~~~~A~~~~~~al~~~p~~~~---------~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~--~~~l~~ 141 (365)
T 4eqf_A 73 LKRLKEGDLPVTILFMEAAILQDPGDAE---------AWQFLGITQAENENEQAAIVALQRCLELQPNNLKA--LMALAV 141 (365)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHhCcCCHH---------HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHH--HHHHHH
Confidence 3344456677777766666654431110 001122233 6678888888888888887774433 567777
Q ss_pred HHHHhhcHHHHHHHHHHHHccCCC-----------------------------------------------HHHHHHHHH
Q 017383 93 ECFKQKKFKEAIDCYSRSIALSPT-----------------------------------------------AVAYANRAM 125 (372)
Q Consensus 93 ~~~~~g~~~~Ai~~y~~al~~~p~-----------------------------------------------~~~~~~la~ 125 (372)
+|...|++++|+.+|++++.++|+ +.++.++|.
T Consensus 142 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~ 221 (365)
T 4eqf_A 142 SYTNTSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGV 221 (365)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHH
T ss_pred HHHccccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHH
Confidence 777777777777777777766554 334455555
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH
Q 017383 126 AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 126 ~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
+|..+|++++|+..|++++.++|+++.+|+.+|.++..+|++++|+..|++++.++|++..++
T Consensus 222 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~ 284 (365)
T 4eqf_A 222 LFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSR 284 (365)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHH
Confidence 555555555555555555555555555555555555555555555555555555555554443
No 39
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.65 E-value=3e-15 Score=121.46 Aligned_cols=114 Identities=35% Similarity=0.522 Sum_probs=105.2
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
.+..++.+|.+++..|+|++|+.+|.+++.++|. ..+++++|.++..+|++++|+.+|++++.++|+++.+++++|.++
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 87 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 87 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHH
Confidence 4566889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHccCCC-----cHHHHHHHHHHHH
Q 017383 162 KELGKLKESIEDSEFALRLEPQ-----NQEIKKQLAEVKS 196 (372)
Q Consensus 162 ~~lg~~~~A~~~~~~al~l~P~-----~~~~~~~l~~a~~ 196 (372)
..+|++++|+..|++++.++|+ +..+...+..+..
T Consensus 88 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~ 127 (137)
T 3q49_B 88 LEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKK 127 (137)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 5666655555543
No 40
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.65 E-value=1e-15 Score=123.30 Aligned_cols=100 Identities=16% Similarity=0.090 Sum_probs=91.4
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 165 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg 165 (372)
++.+|..++..|++++|+.+|++++.++|+ +.+|+++|.++..+|++++|+..|++++.++|++..+++.+|.++..+|
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g 99 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEH 99 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence 568999999999999999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHccCCCcHH
Q 017383 166 KLKESIEDSEFALRLEPQNQE 186 (372)
Q Consensus 166 ~~~~A~~~~~~al~l~P~~~~ 186 (372)
++++|+..|++++.++|++..
T Consensus 100 ~~~~A~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 100 NANAALASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred CHHHHHHHHHHHHHhCcCCCC
Confidence 999999999999999998754
No 41
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.65 E-value=2.7e-15 Score=133.06 Aligned_cols=139 Identities=14% Similarity=0.179 Sum_probs=116.2
Q ss_pred CCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhc
Q 017383 54 PSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR 131 (372)
Q Consensus 54 ~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g 131 (372)
..|..| ..|++++|+..|++++..+|... ..+..+|.+++..|++++|+.+|++++..+|. ..++..+|.++..+|
T Consensus 28 ~~a~~~~~~~~~~~A~~~~~~~l~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 105 (243)
T 2q7f_A 28 QQMGRGSEFGDYEKAAEAFTKAIEENKEDA--IPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKE 105 (243)
T ss_dssp --------------CCTTHHHHHTTCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhCHHHHHHHHHHHHHhCcccH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhc
Confidence 344444 78999999999999999999854 44779999999999999999999999999998 999999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
++++|+..+++++.++|.+..+++.+|.++...|++++|+..|++++.+.|++..++..+..+
T Consensus 106 ~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 168 (243)
T 2q7f_A 106 MYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMC 168 (243)
T ss_dssp CHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988876554443
No 42
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.65 E-value=5.6e-15 Score=138.05 Aligned_cols=141 Identities=19% Similarity=0.253 Sum_probs=128.8
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHH----------HHHHHHHHHhhcHHHHHHHHHHHHccCCC-H----HHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSE----------KELGNECFKQKKFKEAIDCYSRSIALSPT-A----VAYANRA 124 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~----------~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~----~~~~~la 124 (372)
..|++++|+..|.+++..+|....+..+ ..+|.+++..|++++|+.+|++++..+|+ . .++..+|
T Consensus 200 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la 279 (359)
T 3ieg_A 200 QLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERIC 279 (359)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 6799999999999999999987765432 25599999999999999999999999998 3 5577899
Q ss_pred HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHH
Q 017383 125 MAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (372)
Q Consensus 125 ~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 200 (372)
.++..+|++++|+..|++++.++|+++.+++.+|.++..+|++++|+.+|+++++++|++..++..+..+...+++
T Consensus 280 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~ 355 (359)
T 3ieg_A 280 HCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNENDQQIREGLEKAQRLLKQ 355 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888777654
No 43
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.64 E-value=4.5e-15 Score=134.13 Aligned_cols=129 Identities=17% Similarity=0.082 Sum_probs=120.1
Q ss_pred CCCCchhhHHHHHhhhhcCCCC--chHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEEST--PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEA 136 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~--~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA 136 (372)
..|++++|+..|.+++...+.. ..+..+..+|.+++..|++++|+.+|++++.++|. ..++.++|.+|..+|++++|
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A 96 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAA 96 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHH
Confidence 6689999999999999985432 25667889999999999999999999999999998 99999999999999999999
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH
Q 017383 137 EDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 137 ~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
+.+|++++.++|.+..+++.+|.++..+|++++|+..|++++.++|++....
T Consensus 97 ~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 148 (275)
T 1xnf_A 97 YEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRS 148 (275)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHH
Confidence 9999999999999999999999999999999999999999999999997554
No 44
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.64 E-value=1.4e-15 Score=138.06 Aligned_cols=166 Identities=13% Similarity=0.076 Sum_probs=136.5
Q ss_pred hhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCch-HHHHHHHHHHH
Q 017383 17 NDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNEC 94 (372)
Q Consensus 17 ~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~-a~~~~~~g~~~ 94 (372)
-..++|++++......+...+..... ..+...+|..| ..|++++|+..|++++...|.++. ..+++.+|.++
T Consensus 26 ~~~g~~~~A~~~~~~~l~~~p~~~~~------~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~ 99 (261)
T 3qky_A 26 YNQGKYDRAIEYFKAVFTYGRTHEWA------ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCY 99 (261)
T ss_dssp HHTTCHHHHHHHHHHHGGGCSCSTTH------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHhCCCCcch------HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHH
Confidence 34578888888888887665522100 00111223334 789999999999999999986643 56688999999
Q ss_pred HH--------hhcHHHHHHHHHHHHccCCC----HHHH--------------HHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 017383 95 FK--------QKKFKEAIDCYSRSIALSPT----AVAY--------------ANRAMAYLKLRRFQEAEDDCTEALNLDD 148 (372)
Q Consensus 95 ~~--------~g~~~~Ai~~y~~al~~~p~----~~~~--------------~~la~~~~~~g~~~eA~~~~~~Al~l~p 148 (372)
+. .|++++|+.+|++++..+|+ ..++ +++|.+|..+|+|++|+..|++++..+|
T Consensus 100 ~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p 179 (261)
T 3qky_A 100 YKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYP 179 (261)
T ss_dssp HHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCC
Confidence 99 99999999999999999997 3333 8899999999999999999999999999
Q ss_pred C---CHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHccCCCcHHHH
Q 017383 149 R---YIKAYSRRATARKEL----------GKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 149 ~---~~~a~~~lg~~~~~l----------g~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
+ ...+++.+|.++..+ |++++|+..|++++...|+++.+.
T Consensus 180 ~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~ 232 (261)
T 3qky_A 180 DTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLR 232 (261)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHH
T ss_pred CCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHCCCChHHH
Confidence 8 578999999999988 999999999999999999996554
No 45
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.64 E-value=1.1e-14 Score=113.71 Aligned_cols=113 Identities=32% Similarity=0.522 Sum_probs=106.5
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
.+..++.+|..++..|+|++|+.+|++++..+|. ..++.++|.++..+|++++|+..+++++.++|++..+++.+|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 4556889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Q 017383 162 KELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (372)
Q Consensus 162 ~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~ 195 (372)
..+|++++|+..|++++.++|++..++..+..+.
T Consensus 83 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 83 EFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhh
Confidence 9999999999999999999999998887776653
No 46
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.64 E-value=4.5e-15 Score=131.62 Aligned_cols=133 Identities=15% Similarity=0.126 Sum_probs=123.7
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++..+|... ..+..+|.++...|++++|+.+|++++..+|. ..++..+|.++..+|++++|+.
T Consensus 69 ~~~~~~~A~~~~~~~~~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 146 (243)
T 2q7f_A 69 SVNELERALAFYDKALELDSSAA--TAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALP 146 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCcch--HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHH
Confidence 77999999999999999999854 45779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
.+++++.++|.+..+++.+|.++...|++++|+..|++++.+.|++..++..+..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 202 (243)
T 2q7f_A 147 YLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAGVT 202 (243)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998876554443
No 47
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.64 E-value=4.3e-15 Score=129.84 Aligned_cols=121 Identities=20% Similarity=0.173 Sum_probs=112.7
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++ +| .+.+++.+|.+++..|+|++|+.+|++++.++|. ..+++++|.+|..+|++++|+.
T Consensus 18 ~~~~~~~A~~~~~~a~--~~---~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~ 92 (213)
T 1hh8_A 18 DKKDWKGALDAFSAVQ--DP---HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIK 92 (213)
T ss_dssp HTTCHHHHHHHHHTSS--SC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhCCHHHHHHHHHHHc--CC---ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHH
Confidence 6799999999999996 33 3456889999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcH
Q 017383 139 DCTEALNLDDRYI----------------KAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 185 (372)
Q Consensus 139 ~~~~Al~l~p~~~----------------~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~ 185 (372)
+|++++.+.|.+. .+++++|.++..+|++++|+.+|++++.++|++.
T Consensus 93 ~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~ 155 (213)
T 1hh8_A 93 DLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPR 155 (213)
T ss_dssp HHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGG
T ss_pred HHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCcccc
Confidence 9999999888766 9999999999999999999999999999999874
No 48
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.63 E-value=3.1e-15 Score=151.36 Aligned_cols=133 Identities=14% Similarity=0.046 Sum_probs=102.8
Q ss_pred CCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHH
Q 017383 61 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDD 139 (372)
Q Consensus 61 ~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~ 139 (372)
.|++++|+..|+++++.+|.+.. ++..+|.+++..|+|++|+.+|+++++++|+ ..++.++|.+|..+|++++|+.+
T Consensus 2 ~g~~~~A~~~~~~al~~~p~~~~--~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 79 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHRPQDFV--AWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVL 79 (568)
T ss_dssp -------------------CCHH--HHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 37889999999999999998544 4779999999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Q 017383 140 CTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (372)
Q Consensus 140 ~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~ 195 (372)
|+++++++|++..+++++|.++..+|++++|+..|++++.++|++..++..+..+.
T Consensus 80 ~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 135 (568)
T 2vsy_A 80 LQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWR 135 (568)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988765554443
No 49
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.63 E-value=7.4e-16 Score=159.82 Aligned_cols=133 Identities=9% Similarity=-0.068 Sum_probs=126.3
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|+++++.+|++..+ ++.+|.+++..|+|++|+.+|+++++++|+ ..+++++|.+|..+|++++ +.
T Consensus 445 ~~g~~~~A~~~~~~al~~~p~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~ 521 (681)
T 2pzi_A 445 DLGDVAKATRKLDDLAERVGWRWRL--VWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HK 521 (681)
T ss_dssp HHTCHHHHHHHHHHHHHHHCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TC
T ss_pred hcCCHHHHHHHHHHHhccCcchHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HH
Confidence 6799999999999999999995555 779999999999999999999999999998 9999999999999999999 99
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~ 195 (372)
+|++|++++|++..+|+++|.++..+|++++|+.+|++++.++|++..++..+..+.
T Consensus 522 ~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~~~~~~ 578 (681)
T 2pzi_A 522 FYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFTTARLTSAVTL 578 (681)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHHHHHHHHHHHT
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999887777664
No 50
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.63 E-value=3.6e-15 Score=130.30 Aligned_cols=168 Identities=13% Similarity=0.048 Sum_probs=133.7
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHH
Q 017383 14 GFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGN 92 (372)
Q Consensus 14 ~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~ 92 (372)
..+....+|+++++.....+...+.... ....+|..| ..|++++|+..|.+++..+|.+.. .+..+|.
T Consensus 16 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~---------~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~--~~~~l~~ 84 (225)
T 2vq2_A 16 MEYMRGQDYRQATASIEDALKSDPKNEL---------AWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAE--INNNYGW 84 (225)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH--HHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCccchH---------HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChH--HHHHHHH
Confidence 3444556777777777666654431110 001122233 678999999999999999988544 4678999
Q ss_pred HHHHh-hcHHHHHHHHHHHHc--cCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHH
Q 017383 93 ECFKQ-KKFKEAIDCYSRSIA--LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (372)
Q Consensus 93 ~~~~~-g~~~~Ai~~y~~al~--~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~ 168 (372)
+++.. |++++|+.+|++++. .+|. ..++.++|.++...|++++|+..+++++..+|.+..+++.+|.++..+|+++
T Consensus 85 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 164 (225)
T 2vq2_A 85 FLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLG 164 (225)
T ss_dssp HHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHH
Confidence 99999 999999999999999 5565 8889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCC-CcHHHHHHHH
Q 017383 169 ESIEDSEFALRLEP-QNQEIKKQLA 192 (372)
Q Consensus 169 ~A~~~~~~al~l~P-~~~~~~~~l~ 192 (372)
+|+..|++++.+.| .+..++..+.
T Consensus 165 ~A~~~~~~~~~~~~~~~~~~~~~~~ 189 (225)
T 2vq2_A 165 DADYYFKKYQSRVEVLQADDLLLGW 189 (225)
T ss_dssp HHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999 8877754433
No 51
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.63 E-value=3.9e-15 Score=137.85 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=67.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++...|....+ +..+|.++...|++++|+.+|++++..+|. ..++.++|.++..+|++++|+.
T Consensus 137 ~~~~~~~A~~~~~~a~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 214 (330)
T 3hym_B 137 VESEHDQAMAAYFTAAQLMKGCHLP--MLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEK 214 (330)
T ss_dssp HHTCHHHHHHHHHHHHHHTTTCSHH--HHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhccccHHH--HHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHHHHHH
Confidence 3455555555555555555553333 334555555555555555555555555555 5555555555555555555555
Q ss_pred HHHHHHhcC---------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH
Q 017383 139 DCTEALNLD---------DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 139 ~~~~Al~l~---------p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
.+++++.+. |.+..+++.+|.++..+|++++|+..|++++.++|++..++
T Consensus 215 ~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~ 273 (330)
T 3hym_B 215 WFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTY 273 (330)
T ss_dssp HHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHH
T ss_pred HHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHH
Confidence 555555543 44445555555555555555555555555555555554443
No 52
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.63 E-value=5.1e-16 Score=129.83 Aligned_cols=108 Identities=15% Similarity=0.129 Sum_probs=98.1
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCH
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKL 167 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~ 167 (372)
.+|.++...|++++|+..|++++..+|. +.+++++|.+|+.+|+|++|+.+|+++++++|+++.+|+++|.++..+|++
T Consensus 2 ~LG~~~~~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 2 PLGSMRRSKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp -----CCCHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HhHHHHHHcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 4789999999999999999999999998 888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 168 KESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 168 ~~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
++|+.+|+++++++|++..++..++.+..
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~la~~~~ 110 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQKDLVLKIAELLC 110 (150)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 99999999999999999998877766543
No 53
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.63 E-value=8.6e-15 Score=128.87 Aligned_cols=113 Identities=19% Similarity=0.158 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHH----------------HHHHHHHhcCHHHHHHHHHHHHhc
Q 017383 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN----------------RAMAYLKLRRFQEAEDDCTEALNL 146 (372)
Q Consensus 84 a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~----------------la~~~~~~g~~~eA~~~~~~Al~l 146 (372)
+..+...|..++..|+|++|+.+|++++.++|+ +.+++. +|.+|..+|++++|+.+|++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 83 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQK 83 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 334678999999999999999999999999998 888888 999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 147 DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 147 ~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
+|+++.+++++|.++..+|++++|+.+|++++.++|++..++..++.+..
T Consensus 84 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~ 133 (208)
T 3urz_A 84 APNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYY 133 (208)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888877653
No 54
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.62 E-value=1.1e-14 Score=134.88 Aligned_cols=168 Identities=12% Similarity=-0.010 Sum_probs=141.0
Q ss_pred hHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCCCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHh
Q 017383 18 DLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGNSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ 97 (372)
Q Consensus 18 ~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~ 97 (372)
...+|+++++.....+...+......... +...+..|++++|+..+.+++..+|.+..+ +..+|.+++..
T Consensus 34 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~~--------~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~ 103 (330)
T 3hym_B 34 YNCDFKMCYKLTSVVMEKDPFHASCLPVH--------IGTLVELNKANELFYLSHKLVDLYPSNPVS--WFAVGCYYLMV 103 (330)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTTTHHHH--------HHHHHHHTCHHHHHHHHHHHHHHCTTSTHH--HHHHHHHHHHS
T ss_pred HcCCHHHHHHHHHHHHHcCCCChhhHHHH--------HHHHHHhhhHHHHHHHHHHHHHhCcCCHHH--HHHHHHHHHHh
Confidence 34788888887777776655221111000 011136799999999999999999986555 66999999999
Q ss_pred h-cHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 017383 98 K-KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSE 175 (372)
Q Consensus 98 g-~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~ 175 (372)
| ++++|+.+|++++.++|. ..++..+|.++..+|++++|+..|++++.++|++..+++.+|.++...|++++|+..|+
T Consensus 104 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 183 (330)
T 3hym_B 104 GHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFS 183 (330)
T ss_dssp CSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 9 999999999999999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCcHHHHHHHHHHH
Q 017383 176 FALRLEPQNQEIKKQLAEVK 195 (372)
Q Consensus 176 ~al~l~P~~~~~~~~l~~a~ 195 (372)
+++.+.|++..++..+..+.
T Consensus 184 ~al~~~~~~~~~~~~l~~~~ 203 (330)
T 3hym_B 184 QALSIAPEDPFVMHEVGVVA 203 (330)
T ss_dssp HHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHhCCCChHHHHHHHHHH
Confidence 99999999988776655543
No 55
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.62 E-value=1.2e-14 Score=126.91 Aligned_cols=133 Identities=14% Similarity=0.044 Sum_probs=122.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHh-cCHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL-RRFQEAE 137 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~-g~~~eA~ 137 (372)
..|++++|+..|.+++..+|.... .+..+|.++...|++++|+.+|++++..+|. ..++.++|.++... |++++|+
T Consensus 20 ~~~~~~~A~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~ 97 (225)
T 2vq2_A 20 RGQDYRQATASIEDALKSDPKNEL--AWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESM 97 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHH
T ss_pred HHhhHHHHHHHHHHHHHhCccchH--HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHH
Confidence 679999999999999999998544 4779999999999999999999999999998 99999999999999 9999999
Q ss_pred HHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 138 DDCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 138 ~~~~~Al~--l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
..+++++. .+|.+..+++.+|.++...|++++|+..|++++.+.|++..++..+..+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 156 (225)
T 2vq2_A 98 AYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELART 156 (225)
T ss_dssp HHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHH
Confidence 99999999 6777899999999999999999999999999999999998876554444
No 56
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.62 E-value=1.2e-14 Score=131.38 Aligned_cols=174 Identities=12% Similarity=0.017 Sum_probs=141.6
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCch--HHHHHH
Q 017383 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPD--ATSEKE 89 (372)
Q Consensus 13 ~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~--a~~~~~ 89 (372)
...+-..++|++++....+.+...+..... ...+|..| ..|++++|+..|.+++. .|.++. +.++..
T Consensus 10 a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~---------~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~ 79 (272)
T 3u4t_A 10 ADFLFKNNNYAEAIEVFNKLEAKKYNSPYI---------YNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEY 79 (272)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHTTCCCSTT---------HHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHH
T ss_pred HHHHHHhcCHHHHHHHHHHHHHhCCCcHHH---------HHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHH
Confidence 345556678888888888877655421110 11122233 78999999999999999 333322 445789
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHH
Q 017383 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLK 168 (372)
Q Consensus 90 ~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~ 168 (372)
+|.++...|++++|+.+|+++++++|. ..++.++|.+|..+|++++|+.+|++++.++|.+..+++.+|...+..++++
T Consensus 80 lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~ 159 (272)
T 3u4t_A 80 YGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYV 159 (272)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 9999999999999999999999999999999999999999995555667999
Q ss_pred HHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 169 ESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 169 ~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
+|+..|++++.++|++..++..+..+..
T Consensus 160 ~A~~~~~~a~~~~p~~~~~~~~~~~~~~ 187 (272)
T 3u4t_A 160 KADSSFVKVLELKPNIYIGYLWRARANA 187 (272)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 9999999999999999877666655543
No 57
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.62 E-value=9.8e-16 Score=158.89 Aligned_cols=134 Identities=11% Similarity=-0.031 Sum_probs=124.3
Q ss_pred CCCCCchhhHHHHHhhh--------hcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHH
Q 017383 59 NSYSRNYDPVSHISSSL--------MNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLK 129 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al--------~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~ 129 (372)
+..|++++|+..|++++ ..+|.+..+ +..+|.+++..|+|++|+..|+++++++|+ ..+|+++|.+|..
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~--~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~ 479 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVEL--PLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELL 479 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhH--HHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHH
Confidence 36799999999999999 888986665 669999999999999999999999999998 9999999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Q 017383 130 LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (372)
Q Consensus 130 ~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~ 195 (372)
+|++++|+.+|++|++++|++..+|+++|.++..+|++++ +.+|+++++++|++..++..++.+.
T Consensus 480 ~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~ 544 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARAR 544 (681)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999 9999999999999998876655554
No 58
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.62 E-value=7.8e-15 Score=117.56 Aligned_cols=114 Identities=32% Similarity=0.524 Sum_probs=107.3
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
....++.+|.+++..|+|++|+.+|++++..+|. ..++.++|.++..+|++++|+.+|++++.++|.+..+++++|.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~ 94 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 5566889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 162 KELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 162 ~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
..+|++++|+..|++++.++|++..++..+..+..
T Consensus 95 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~ 129 (133)
T 2lni_A 95 EAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMM 129 (133)
T ss_dssp HHTTCHHHHHHHHHHHHHHCGGGTHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 99999999999999999999999888877766643
No 59
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.62 E-value=2.1e-14 Score=128.52 Aligned_cols=131 Identities=12% Similarity=0.083 Sum_probs=105.6
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHc--cCCC-HHHHHHHHHHHHHhcCHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA--LSPT-AVAYANRAMAYLKLRRFQEA 136 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~--~~p~-~~~~~~la~~~~~~g~~~eA 136 (372)
..|++++|+..|.+++..+|... ..+..+|.+++..|++++|+.+|++++. ..|. ..++.++|.++..+|++++|
T Consensus 83 ~~~~~~~A~~~~~~a~~~~~~~~--~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A 160 (252)
T 2ho1_A 83 TEMEPKLADEEYRKALASDSRNA--RVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQA 160 (252)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCcCcH--HHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHH
Confidence 66888888888888888887743 3466888888888888888888888888 6666 77888888888888888888
Q ss_pred HHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHH
Q 017383 137 EDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 192 (372)
Q Consensus 137 ~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 192 (372)
+..+++++.++|.+..+++.+|.++..+|++++|+..|++++.+.|++..++..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~ 216 (252)
T 2ho1_A 161 KEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGI 216 (252)
T ss_dssp HHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHH
T ss_pred HHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHH
Confidence 88888888888888888888888888888888888888888888888776654333
No 60
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.62 E-value=3.6e-14 Score=118.28 Aligned_cols=118 Identities=35% Similarity=0.635 Sum_probs=109.1
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
.+..++.+|.+++..|+|++|+.+|.+++..+|. ..++.++|.++..+|++++|+.++.+++.++|.++.+++++|.++
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~ 91 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 91 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 4556889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHH
Q 017383 162 KELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (372)
Q Consensus 162 ~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 200 (372)
..+|++++|+.+|++++.++|++..++..+..+...+..
T Consensus 92 ~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 130 (166)
T 1a17_A 92 MALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQ 130 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887666666554443
No 61
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=1.7e-14 Score=117.89 Aligned_cols=112 Identities=31% Similarity=0.508 Sum_probs=105.6
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRA 158 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg 158 (372)
.+..++.+|..++..|+|++|+.+|++++.++|+ ..++.++|.+|..+|++++|+.+|++++.++|++..+++++|
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 106 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRS 106 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHH
Confidence 5566889999999999999999999999999998 788999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 159 TARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 159 ~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
.++..+|++++|+.+|++++.++|++..++..+..+
T Consensus 107 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 142 (148)
T 2dba_A 107 QALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNI 142 (148)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 999999999999999999999999999887766554
No 62
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.61 E-value=1.4e-14 Score=129.63 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=123.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|++++..+|... .++..+|.+++..|++++|+.+|++++..+|. ..++.++|.+|..+|++++|+.
T Consensus 49 ~~~~~~~A~~~~~~al~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 126 (252)
T 2ho1_A 49 QRGNTEQAKVPLRKALEIDPSSA--DAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQ 126 (252)
T ss_dssp HTTCTGGGHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCChHHHHHHHHHHHhcCCChH--HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHH
Confidence 67999999999999999998854 45779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 139 DCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 139 ~~~~Al~--l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
.+++++. .+|.+..+++.+|.++...|++++|+..|++++.+.|.+..++..+..+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 184 (252)
T 2ho1_A 127 RLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADL 184 (252)
T ss_dssp HHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred HHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHH
Confidence 9999999 8899999999999999999999999999999999999998876555444
No 63
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.60 E-value=1.8e-14 Score=133.24 Aligned_cols=136 Identities=13% Similarity=0.151 Sum_probs=125.6
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHH
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~ 137 (372)
+..|++++|+..+++++..+|.+. ..+..+|.++...|++++|+.+|++++..+|+ ..++.++|.++...|++++|+
T Consensus 149 ~~~~~~~~A~~~~~~~~~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 226 (327)
T 3cv0_A 149 AAPNEYRECRTLLHAALEMNPNDA--QLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEAL 226 (327)
T ss_dssp TSHHHHHHHHHHHHHHHHHSTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHcccHHHHHHHHHHHHhhCCCCH--HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHH
Confidence 377999999999999999999854 45779999999999999999999999999998 999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC------------cHHHHHHHHHHHH
Q 017383 138 DDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ------------NQEIKKQLAEVKS 196 (372)
Q Consensus 138 ~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~------------~~~~~~~l~~a~~ 196 (372)
..|++++.++|++..+++.+|.++..+|++++|+..|++++.+.|+ +..++..+..+..
T Consensus 227 ~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 297 (327)
T 3cv0_A 227 DAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLN 297 (327)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 6666666665544
No 64
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.60 E-value=3.3e-14 Score=113.04 Aligned_cols=115 Identities=37% Similarity=0.532 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
.+..+..+|..++..|+|++|+.+|++++..+|. ..++.++|.++..+|++++|+.++.+++.++|++..+++.+|.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLAL 90 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHH
Confidence 4566889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHH
Q 017383 162 KELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSL 197 (372)
Q Consensus 162 ~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~ 197 (372)
..+|++++|+..|++++.++|++..++..+..+...
T Consensus 91 ~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 91 SSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELK 126 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 999999999999999999999998888777766543
No 65
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.60 E-value=2.1e-14 Score=114.38 Aligned_cols=123 Identities=28% Similarity=0.404 Sum_probs=113.6
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..+.+++..+|... ..+..+|.++...|++++|+.+|++++...|. ..++.++|.++...|++++|+.
T Consensus 13 ~~~~~~~A~~~~~~~~~~~~~~~--~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 90 (136)
T 2fo7_A 13 KQGDYDEAIEYYQKALELDPRSA--EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIE 90 (136)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHH
T ss_pred HcCcHHHHHHHHHHHHHcCCcch--hHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHH
Confidence 56899999999999999988754 44778999999999999999999999999998 8899999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
.+.+++..+|.+..+++.+|.++...|++++|...|++++.++|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 91 YYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 9999999999999999999999999999999999999999998863
No 66
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.60 E-value=2.7e-14 Score=133.36 Aligned_cols=171 Identities=15% Similarity=0.093 Sum_probs=133.3
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHH
Q 017383 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELG 91 (372)
Q Consensus 13 ~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g 91 (372)
...+-..++|++++......+...+.... .....|..| ..|++++|+..|++++..+|.+..+ +..+|
T Consensus 10 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~---------~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~ 78 (359)
T 3ieg_A 10 GKKLLAAGQLADALSQFHAAVDGDPDNYI---------AYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAA--RLQRG 78 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHH--HHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhhCcccHH---------HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchH--HHHHH
Confidence 34444556778887777777655441110 001122233 6789999999999999999885544 67899
Q ss_pred HHHHHhhcHHHHHHHHHHHHccCC---C-HHHHHHH------------HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Q 017383 92 NECFKQKKFKEAIDCYSRSIALSP---T-AVAYANR------------AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 155 (372)
Q Consensus 92 ~~~~~~g~~~~Ai~~y~~al~~~p---~-~~~~~~l------------a~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~ 155 (372)
.++...|++++|+.+|++++.++| + ..++..+ |.++...|++++|+..+++++..+|.++.++.
T Consensus 79 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 158 (359)
T 3ieg_A 79 HLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRE 158 (359)
T ss_dssp HHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHH
Confidence 999999999999999999999999 6 6666555 78999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 156 RRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 156 ~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
.+|.++..+|++++|+..|++++.+.|++..++..+..+
T Consensus 159 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 197 (359)
T 3ieg_A 159 LRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTL 197 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 999999999999999999999999999988776444433
No 67
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.60 E-value=1e-14 Score=137.61 Aligned_cols=148 Identities=18% Similarity=0.114 Sum_probs=125.1
Q ss_pred CCCCchhhHH-HHHhhhhcCCCCc--hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHH
Q 017383 60 SYSRNYDPVS-HISSSLMNEESTP--DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQE 135 (372)
Q Consensus 60 ~~g~~~~A~~-~~~~al~~~p~~~--~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~e 135 (372)
..|+|++|+. .|.+++...|.++ .+..++.+|.+++..|+|++|+.+|+++++.+|. ..++.++|.++..+|++++
T Consensus 37 ~~~~~~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 116 (368)
T 1fch_A 37 WLSDYDDLTSATYDKGYQFEEENPLRDHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELL 116 (368)
T ss_dssp ---------CHHHHCCCCCCSSCTTTTCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHhhhhhHHHhcCCCCcccchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHH
Confidence 6799999999 9999999998765 2445779999999999999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH-------------------------HH
Q 017383 136 AEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK-------------------------KQ 190 (372)
Q Consensus 136 A~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~-------------------------~~ 190 (372)
|+..|++++.++|++..+++.+|.++..+|++++|+..|++++.+.|++...+ +.
T Consensus 117 A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (368)
T 1fch_A 117 AISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSL 196 (368)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999999999865443 56
Q ss_pred HHHHHHHHHHHHHhhhh
Q 017383 191 LAEVKSLYEKEVFQKAS 207 (372)
Q Consensus 191 l~~a~~~~~~~~~~~~~ 207 (372)
+.+|...+.+++...+.
T Consensus 197 ~~~A~~~~~~a~~~~p~ 213 (368)
T 1fch_A 197 FLEVKELFLAAVRLDPT 213 (368)
T ss_dssp HHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 67777777777766654
No 68
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.59 E-value=4e-14 Score=131.56 Aligned_cols=164 Identities=11% Similarity=0.033 Sum_probs=82.4
Q ss_pred HHHHHhhHHHHHHHHHHHHHHhhhcC-CCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHH
Q 017383 12 FQGFLNDLQDWDLSLNEKDKKMKHKA-SSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKE 89 (372)
Q Consensus 12 l~~~~~~l~~~e~~ik~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~ 89 (372)
+..++....+++++++..++.+.... +...... ...|..| ..|++++|+..|.+ |.+..+ +..
T Consensus 71 la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~--------~~la~~~~~~g~~~~Al~~l~~-----~~~~~~--~~~ 135 (291)
T 3mkr_A 71 FAEYLASHSRRDAIVAELDREMSRSVDVTNTTFL--------LMAASIYFYDQNPDAALRTLHQ-----GDSLEC--MAM 135 (291)
T ss_dssp HHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHH--------HHHHHHHHHTTCHHHHHHHHTT-----CCSHHH--HHH
T ss_pred HHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHH--------HHHHHHHHHCCCHHHHHHHHhC-----CCCHHH--HHH
Confidence 34555555667777776666553321 1100000 0011122 44566666665555 332232 445
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHH--HHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 017383 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRA--MAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (372)
Q Consensus 90 ~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la--~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~ 166 (372)
+|.++...|++++|+.+|+++++.+|+ .......| ..+...|++++|+..|++++..+|+++.+++++|.++..+|+
T Consensus 136 l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~ 215 (291)
T 3mkr_A 136 TVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGR 215 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 566666666666666666666655555 21111111 112223556666666666666666666666666666666666
Q ss_pred HHHHHHHHHHHHccCCCcHHHHHH
Q 017383 167 LKESIEDSEFALRLEPQNQEIKKQ 190 (372)
Q Consensus 167 ~~~A~~~~~~al~l~P~~~~~~~~ 190 (372)
+++|+..|++++.++|++++++..
T Consensus 216 ~~eA~~~l~~al~~~p~~~~~l~~ 239 (291)
T 3mkr_A 216 WEAAEGVLQEALDKDSGHPETLIN 239 (291)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHH
Confidence 666666666666666665555433
No 69
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.58 E-value=2e-14 Score=127.89 Aligned_cols=127 Identities=16% Similarity=0.077 Sum_probs=114.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch-HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC----HHHHHHHHHHHHH-----
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLK----- 129 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~-a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~~la~~~~~----- 129 (372)
..|++++|+..|++++...|..+. ..+++.+|.+++..|+|++|+..|+++++.+|+ ..+++.+|.++..
T Consensus 16 ~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~ 95 (225)
T 2yhc_A 16 QDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSA 95 (225)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhh
Confidence 679999999999999999987653 356889999999999999999999999999997 4589999999987
Q ss_pred -------------hcCHHHHHHHHHHHHhcCCCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHc
Q 017383 130 -------------LRRFQEAEDDCTEALNLDDRYIKAY-----------------SRRATARKELGKLKESIEDSEFALR 179 (372)
Q Consensus 130 -------------~g~~~eA~~~~~~Al~l~p~~~~a~-----------------~~lg~~~~~lg~~~~A~~~~~~al~ 179 (372)
+|++++|+..|++++..+|++..++ +.+|.++...|++++|+..|+++++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~ 175 (225)
T 2yhc_A 96 LQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLR 175 (225)
T ss_dssp ------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 5799999999999999999986554 6789999999999999999999999
Q ss_pred cCCCcHH
Q 017383 180 LEPQNQE 186 (372)
Q Consensus 180 l~P~~~~ 186 (372)
..|+++.
T Consensus 176 ~~p~~~~ 182 (225)
T 2yhc_A 176 DYPDTQA 182 (225)
T ss_dssp HSTTSHH
T ss_pred HCcCCCc
Confidence 9999864
No 70
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.58 E-value=4.8e-14 Score=112.21 Aligned_cols=116 Identities=25% Similarity=0.430 Sum_probs=106.0
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-------HHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY-------IKAY 154 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~-------~~a~ 154 (372)
.+..++.+|..++..|+|++|+.+|.+++..+|. ..++.++|.+|..+|++++|+.+|++++.++|.+ ..++
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 3456889999999999999999999999999998 9999999999999999999999999999999887 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHH
Q 017383 155 SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (372)
Q Consensus 155 ~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (372)
+++|.++..+|++++|+.+|++++.+.| +......+..+...++
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 126 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILK 126 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 5777777776665543
No 71
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.58 E-value=2.6e-14 Score=137.57 Aligned_cols=118 Identities=29% Similarity=0.443 Sum_probs=109.7
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHc----------------cCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIA----------------LSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~----------------~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~ 145 (372)
.+..++.+|+.++..|+|++|+.+|+++++ ++|. ..+|.++|.||+.+|+|++|+.+|++|+.
T Consensus 222 ~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 222 ISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 345688999999999999999999999998 6676 89999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHH
Q 017383 146 LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (372)
Q Consensus 146 l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 200 (372)
++|+++.+|+++|.+|..+|++++|+.+|+++++++|++..++..+..+....++
T Consensus 302 ~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~ 356 (370)
T 1ihg_A 302 IDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKA 356 (370)
T ss_dssp TCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred hCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888887765544
No 72
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.58 E-value=6.1e-14 Score=112.40 Aligned_cols=106 Identities=15% Similarity=0.143 Sum_probs=99.2
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHccCCC-H---HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC---HHHHHHHHH
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-A---VAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY---IKAYSRRAT 159 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~---~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~---~~a~~~lg~ 159 (372)
++.+|.+++..|+|++|+..|++++..+|+ . .+++.+|.+++.+|++++|+..|++++..+|++ +.+++.+|.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~ 84 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGL 84 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHH
Confidence 568999999999999999999999999998 4 799999999999999999999999999999999 899999999
Q ss_pred HHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHH
Q 017383 160 ARKELGKLKESIEDSEFALRLEPQNQEIKKQLA 192 (372)
Q Consensus 160 ~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~ 192 (372)
++..+|++++|+..|++++...|++..+.....
T Consensus 85 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~ 117 (129)
T 2xev_A 85 SQYGEGKNTEAQQTLQQVATQYPGSDAARVAQE 117 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHH
Confidence 999999999999999999999999987654433
No 73
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.58 E-value=1.3e-14 Score=140.92 Aligned_cols=106 Identities=21% Similarity=0.293 Sum_probs=54.2
Q ss_pred HHHHHHhhcHHHHHHHHHHHHccCCC-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 017383 91 GNECFKQKKFKEAIDCYSRSIALSPT-----AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG 165 (372)
Q Consensus 91 g~~~~~~g~~~~Ai~~y~~al~~~p~-----~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg 165 (372)
|.+++..|++++|+.+|++++.++|. ..++.++|.++..+|++++|+..|++++.++|++..+|+.+|.++..+|
T Consensus 264 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~ 343 (450)
T 2y4t_A 264 AEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEE 343 (450)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc
Confidence 44555555555555555555555444 2244455555555555555555555555555555555555555555555
Q ss_pred CHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 166 KLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 166 ~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
++++|+.+|++++.++|++..++..+..+..
T Consensus 344 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~ 374 (450)
T 2y4t_A 344 MYDEAIQDYETAQEHNENDQQIREGLEKAQR 374 (450)
T ss_dssp CHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCcchHHHHHHHHHHHH
Confidence 5555555555555555555554444444433
No 74
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.58 E-value=2.8e-14 Score=120.36 Aligned_cols=124 Identities=19% Similarity=0.146 Sum_probs=117.6
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..+.+++..+|.... .+..+|.+++..|++++|+.+|++++..+|. ..++..+|.++..+|++++|+.
T Consensus 54 ~~~~~~~A~~~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 131 (186)
T 3as5_A 54 KTGAVDRGTELLERSLADAPDNVK--VATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAID 131 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCCCHH--HHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHH
Confidence 789999999999999999988544 4779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 185 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~ 185 (372)
.+++++..+|.+..+++.+|.++...|++++|...|++++.+.|++.
T Consensus 132 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 132 SFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 99999999999999999999999999999999999999999988764
No 75
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.57 E-value=6.6e-14 Score=126.40 Aligned_cols=120 Identities=19% Similarity=0.081 Sum_probs=98.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|++++..+|.+..+ +..+|.+++..|+|++|+.+|++++.++|. ..++.++|.+|..+|++++|+.
T Consensus 55 ~~~~~~~A~~~~~~al~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~ 132 (275)
T 1xnf_A 55 SLGLRALARNDFSQALAIRPDMPEV--FNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQD 132 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcccHHHHHHHHHHHHHcCCCcHHH--HHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHH
Confidence 7899999999999999999985544 779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P 182 (372)
.|++++.++|++...+...+.+ ...|++++|+..|++++...|
T Consensus 133 ~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~A~~~~~~~~~~~~ 175 (275)
T 1xnf_A 133 DLLAFYQDDPNDPFRSLWLYLA-EQKLDEKQAKEVLKQHFEKSD 175 (275)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHH-HHHHCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCChHHHHHHHHH-HHhcCHHHHHHHHHHHHhcCC
Confidence 9999999999886444444333 333555555555555544443
No 76
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.57 E-value=1.4e-14 Score=134.11 Aligned_cols=138 Identities=9% Similarity=0.006 Sum_probs=124.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|++++..+|++..+ +..+|.++...|++++|+..|++++..+|+ ...+...+..+...++..+|+.
T Consensus 129 ~~g~~~~A~~~~~~al~~~P~~~~a--~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~ 206 (287)
T 3qou_A 129 QESNYTDALPLLXDAWQLSNQNGEI--GLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQ 206 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHTTSCHHH--HHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcchhH--HHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHH
Confidence 6799999999999999999996655 669999999999999999999999999998 6667788888999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc--HHHHHHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN--QEIKKQLAEVKSLYE 199 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~--~~~~~~l~~a~~~~~ 199 (372)
.+++++.++|++..+++++|.++...|++++|+..|+++++++|++ ..++..+..+....+
T Consensus 207 ~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g 269 (287)
T 3qou_A 207 QLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALG 269 (287)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999998 777777776655443
No 77
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.57 E-value=1.1e-14 Score=122.27 Aligned_cols=98 Identities=20% Similarity=0.149 Sum_probs=87.8
Q ss_pred HHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCH----------HHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 017383 95 FKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRF----------QEAEDDCTEALNLDDRYIKAYSRRATARKE 163 (372)
Q Consensus 95 ~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~----------~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~ 163 (372)
-+.+.|++|+.+|+++++++|+ +.+|+++|.++..++++ ++|+..|++||+++|++..+|+++|.+|..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 4678899999999999999998 99999999999999875 599999999999999999999999999998
Q ss_pred cC-----------CHHHHHHHHHHHHccCCCcHHHHHHHH
Q 017383 164 LG-----------KLKESIEDSEFALRLEPQNQEIKKQLA 192 (372)
Q Consensus 164 lg-----------~~~~A~~~~~~al~l~P~~~~~~~~l~ 192 (372)
+| ++++|+.+|++|+.++|++...+..+.
T Consensus 93 lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~ 132 (158)
T 1zu2_A 93 FAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLE 132 (158)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hcccCcchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 85 899999999999999999976654443
No 78
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.56 E-value=1.8e-15 Score=140.25 Aligned_cols=126 Identities=13% Similarity=0.095 Sum_probs=59.3
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch----HHHHHHHHHHHHHh-hcHHHHHHHHHHHHccCCC-------HHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQ-KKFKEAIDCYSRSIALSPT-------AVAYANRAMAY 127 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~----a~~~~~~g~~~~~~-g~~~~Ai~~y~~al~~~p~-------~~~~~~la~~~ 127 (372)
..|++++|+.+|++++.+.+...+ +.++.++|.+|... |++++|+.+|++++++.|. ..++.++|.+|
T Consensus 89 ~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~ 168 (292)
T 1qqe_A 89 SGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLK 168 (292)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHH
Confidence 445555555555555554432211 23344555555553 5555555555555554432 23445555555
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCCHH-------HHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcH
Q 017383 128 LKLRRFQEAEDDCTEALNLDDRYIK-------AYSRRATARKELGKLKESIEDSEFALRLEPQNQ 185 (372)
Q Consensus 128 ~~~g~~~eA~~~~~~Al~l~p~~~~-------a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~ 185 (372)
..+|+|++|+.+|++++.+.|++.. +++++|.++..+|++++|+.+|++++.++|++.
T Consensus 169 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 233 (292)
T 1qqe_A 169 ALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 233 (292)
T ss_dssp HHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC-----
T ss_pred HHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Confidence 5555555555555555555444321 344555555555555555555555555555443
No 79
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.56 E-value=2.9e-14 Score=110.47 Aligned_cols=105 Identities=20% Similarity=0.270 Sum_probs=98.7
Q ss_pred CCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC--CHHHH
Q 017383 78 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR--YIKAY 154 (372)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~--~~~a~ 154 (372)
+|.+..+ +..+|.+++..|+|++|+.+|+++++++|. ..++.++|.++..+|++++|+.++++++.++|. +..++
T Consensus 2 ~p~~~~~--~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~ 79 (112)
T 2kck_A 2 VDQNPEE--YYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVW 79 (112)
T ss_dssp CCSSTTG--GGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHH
T ss_pred CCCcHHH--HHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHH
Confidence 4554444 669999999999999999999999999998 999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHHc-CCHHHHHHHHHHHHccCCCc
Q 017383 155 SRRATARKEL-GKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 155 ~~lg~~~~~l-g~~~~A~~~~~~al~l~P~~ 184 (372)
+.+|.++..+ |++++|+.+|++++...|++
T Consensus 80 ~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 80 AAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 9999999999 99999999999999999975
No 80
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.55 E-value=3.7e-14 Score=140.69 Aligned_cols=146 Identities=16% Similarity=0.181 Sum_probs=126.8
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++..+|.+..+ +..+|.++...|+|++|+.+|++++.++|. ..++.++|.++..+|++++|+.
T Consensus 288 ~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~ 365 (537)
T 3fp2_A 288 DKENSQEFFKFFQKAVDLNPEYPPT--YYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEA 365 (537)
T ss_dssp CSSCCHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHhccCCCCHHH--HHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 7799999999999999999885544 779999999999999999999999999998 8899999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHH----------------H----------HHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI----------------K----------KQLA 192 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~----------------~----------~~l~ 192 (372)
.|++++.++|++..+++.+|.++...|++++|+..|++++.+.|++... . +.+.
T Consensus 366 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 445 (537)
T 3fp2_A 366 FFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEEKFN 445 (537)
T ss_dssp HHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHHHHH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHhHHH
Confidence 9999999999999999999999999999999999999999988765322 1 6667
Q ss_pred HHHHHHHHHHHhhhh
Q 017383 193 EVKSLYEKEVFQKAS 207 (372)
Q Consensus 193 ~a~~~~~~~~~~~~~ 207 (372)
+|...+++++...+.
T Consensus 446 ~A~~~~~~a~~~~p~ 460 (537)
T 3fp2_A 446 AAIKLLTKACELDPR 460 (537)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhCCC
Confidence 777777776666553
No 81
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.55 E-value=3.9e-14 Score=137.57 Aligned_cols=168 Identities=12% Similarity=0.124 Sum_probs=134.6
Q ss_pred HhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHH
Q 017383 16 LNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNEC 94 (372)
Q Consensus 16 ~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~ 94 (372)
+....+|++++......+...+.... ....+|..| ..|++++|+..|.+++..+|.+. ..+..+|.+|
T Consensus 153 ~~~~~~~~~A~~~~~~~~~~~~~~~~---------~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~--~~~~~l~~~~ 221 (450)
T 2y4t_A 153 AFGSGDYTAAIAFLDKILEVCVWDAE---------LRELRAECFIKEGEPRKAISDLKAASKLKNDNT--EAFYKISTLY 221 (450)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCH--HHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChH---------HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH--HHHHHHHHHH
Confidence 44566777777777766654431110 001123334 78999999999999999998854 4477999999
Q ss_pred HHhhcHHHHHHHHHHHHccCCC-HHHHHHH------------HHHHHHhcCHHHHHHHHHHHHhcCCCCH----HHHHHH
Q 017383 95 FKQKKFKEAIDCYSRSIALSPT-AVAYANR------------AMAYLKLRRFQEAEDDCTEALNLDDRYI----KAYSRR 157 (372)
Q Consensus 95 ~~~g~~~~Ai~~y~~al~~~p~-~~~~~~l------------a~~~~~~g~~~eA~~~~~~Al~l~p~~~----~a~~~l 157 (372)
...|++++|+.+|++++.++|+ ..++..+ |.++...|++++|+..|++++.++|+++ .++..+
T Consensus 222 ~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l 301 (450)
T 2y4t_A 222 YQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERI 301 (450)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHH
Confidence 9999999999999999999998 5555444 9999999999999999999999999984 478999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 158 ATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 158 g~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
|.++..+|++++|+..|++++.++|++..++..+..+
T Consensus 302 ~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 338 (450)
T 2y4t_A 302 CHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEA 338 (450)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 9999999999999999999999999998876444433
No 82
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.55 E-value=2.2e-13 Score=107.25 Aligned_cols=112 Identities=35% Similarity=0.491 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017383 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (372)
Q Consensus 84 a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~ 162 (372)
+..+..+|.+++..|++++|+.+|.+++..+|. ..++.++|.++...|++++|+..+++++.++|.+..+++.+|.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~ 88 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYY 88 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHH
Confidence 556789999999999999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHH
Q 017383 163 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEVK 195 (372)
Q Consensus 163 ~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~ 195 (372)
.+|++++|+..|++++.++|++..++..+..+.
T Consensus 89 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~ 121 (125)
T 1na0_A 89 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 121 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 999999999999999999999998887776654
No 83
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.54 E-value=1.9e-14 Score=142.83 Aligned_cols=177 Identities=16% Similarity=0.132 Sum_probs=141.9
Q ss_pred HHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHH
Q 017383 13 QGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELG 91 (372)
Q Consensus 13 ~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g 91 (372)
.++.....+|++++...+..+...+........ ........|..| ..|++++|+..|.+++..+|. ...+..+|
T Consensus 209 ~~~~~a~~~~~~A~~~~~~~l~~~p~~~~~~~~--~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~~~---~~~~~~l~ 283 (537)
T 3fp2_A 209 EGYLVANDLLTKSTDMYHSLLSANTVDDPLREN--AALALCYTGIFHFLKNNLLDAQVLLQESINLHPT---PNSYIFLA 283 (537)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC---HHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHCCCcchhhHH--HHHHHHHHHHHHHhcccHHHHHHHHHHHHhcCCC---chHHHHHH
Confidence 445555667888888777777555421100000 000001122233 679999999999999999987 44577999
Q ss_pred HHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHH
Q 017383 92 NECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKES 170 (372)
Q Consensus 92 ~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A 170 (372)
.+++..|++++|+.+|++++..+|+ ..++..+|.++...|++++|+..|++++.++|++..+++.+|.++..+|++++|
T Consensus 284 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A 363 (537)
T 3fp2_A 284 LTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTES 363 (537)
T ss_dssp HHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 9999999999999999999999998 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCcHHHHHHHHHH
Q 017383 171 IEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 171 ~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
+..|++++.+.|++..++..++.+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~l~~~ 387 (537)
T 3fp2_A 364 EAFFNETKLKFPTLPEVPTFFAEI 387 (537)
T ss_dssp HHHHHHHHHHCTTCTHHHHHHHHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHH
Confidence 999999999999998876544433
No 84
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.54 E-value=2.6e-14 Score=122.07 Aligned_cols=135 Identities=13% Similarity=0.037 Sum_probs=114.0
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHH-HHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAY-LKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~-~~~g~~~eA~~ 138 (372)
..|++++|+..|++++..+|++..+ +..+|.++...|++++|+.+|++++..+|++..+..++.+. ...+...+|+.
T Consensus 18 ~~g~~~~A~~~~~~al~~~P~~~~a--~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~ 95 (176)
T 2r5s_A 18 QQGEHAQALNVIQTLSDELQSRGDV--KLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELK 95 (176)
T ss_dssp HTTCHHHHHHHHHTSCHHHHTSHHH--HHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCcHHH--HHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHH
Confidence 6799999999999999999996555 67999999999999999999999999998644444445443 33344556899
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc--HHHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN--QEIKKQLAEVKS 196 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~--~~~~~~l~~a~~ 196 (372)
.+++++.++|+++.+++.+|.++...|++++|+..|++++.++|+. ..++..+..+..
T Consensus 96 ~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~ 155 (176)
T 2r5s_A 96 RLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILS 155 (176)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999976 446666655544
No 85
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.54 E-value=9.3e-15 Score=122.72 Aligned_cols=115 Identities=10% Similarity=-0.041 Sum_probs=98.5
Q ss_pred HHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 017383 94 CFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIE 172 (372)
Q Consensus 94 ~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~ 172 (372)
+...+++-.+-..|++++.++|+ ..+++++|.+++.+|+|++|+..|++++.++|+++.+|+++|.++..+|++++|+.
T Consensus 12 ~~~l~~~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~ 91 (151)
T 3gyz_A 12 STAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAAD 91 (151)
T ss_dssp HHHHHHHHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHH
Confidence 34455555566778899999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCcHHHHHH----------HHHHHHHHHHHHHhhhhh
Q 017383 173 DSEFALRLEPQNQEIKKQ----------LAEVKSLYEKEVFQKASK 208 (372)
Q Consensus 173 ~~~~al~l~P~~~~~~~~----------l~~a~~~~~~~~~~~~~~ 208 (372)
+|++++.++|+++.++.. +.+|...|++++...+..
T Consensus 92 ~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 92 LYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 999999999999888644 455556666665555433
No 86
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.54 E-value=2.4e-14 Score=132.26 Aligned_cols=98 Identities=12% Similarity=0.212 Sum_probs=68.0
Q ss_pred HHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 017383 94 CFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIE 172 (372)
Q Consensus 94 ~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~ 172 (372)
+...|++++|+.+|++++..+|. ..++..+|.++...|++++|+..+++++.++|++..++..+|.++...|++++|+.
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 227 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALD 227 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 44444445555555555555555 56677777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHccCCCcHHHHHHH
Q 017383 173 DSEFALRLEPQNQEIKKQL 191 (372)
Q Consensus 173 ~~~~al~l~P~~~~~~~~l 191 (372)
.|++++.+.|++..++..+
T Consensus 228 ~~~~a~~~~~~~~~~~~~l 246 (327)
T 3cv0_A 228 AYNRALDINPGYVRVMYNM 246 (327)
T ss_dssp HHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHH
Confidence 7777777777776665333
No 87
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.54 E-value=1.2e-14 Score=134.64 Aligned_cols=127 Identities=10% Similarity=-0.073 Sum_probs=112.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCC----chHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEEST----PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYL 128 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~----~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~la~~~~ 128 (372)
..|++++|+.+|.+++.+.+.. ..+.++.++|.+|...|+|++|+.+|++++.+.+. +.++.++|.+|.
T Consensus 49 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~ 128 (292)
T 1qqe_A 49 LRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE 128 (292)
T ss_dssp HTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 6799999999999999875322 23567899999999999999999999999998753 568999999999
Q ss_pred Hh-cCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHH
Q 017383 129 KL-RRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 186 (372)
Q Consensus 129 ~~-g~~~eA~~~~~~Al~l~p~~------~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~ 186 (372)
.. |++++|+.+|++|+.+.|.. ..++.++|.++..+|++++|+.+|++++.+.|++..
T Consensus 129 ~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~ 193 (292)
T 1qqe_A 129 NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRL 193 (292)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTT
T ss_pred HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCc
Confidence 96 99999999999999998764 578999999999999999999999999999987653
No 88
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.54 E-value=5.2e-14 Score=125.19 Aligned_cols=164 Identities=7% Similarity=-0.027 Sum_probs=131.5
Q ss_pred HhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchH-HHHHHHHHH
Q 017383 16 LNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDA-TSEKELGNE 93 (372)
Q Consensus 16 ~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a-~~~~~~g~~ 93 (372)
+-..++|++++...+..+...+...... .+...+|..| ..|++++|+..|+++++..|++..+ .+++.+|.+
T Consensus 14 ~~~~g~~~~A~~~~~~~~~~~p~~~~~~------~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~ 87 (225)
T 2yhc_A 14 KLQDGNWRQAITQLEALDNRYPFGPYSQ------QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLT 87 (225)
T ss_dssp HHHHTCHHHHHHHHHHHHHHCTTSTTHH------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCChHHH------HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHH
Confidence 3445788888888888776554211100 0011123333 7899999999999999999997653 457788998
Q ss_pred HHH------------------hhcHHHHHHHHHHHHccCCC-HHHH-----------------HHHHHHHHHhcCHHHHH
Q 017383 94 CFK------------------QKKFKEAIDCYSRSIALSPT-AVAY-----------------ANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 94 ~~~------------------~g~~~~Ai~~y~~al~~~p~-~~~~-----------------~~la~~~~~~g~~~eA~ 137 (372)
++. .|++++|+.+|++++..+|+ ..++ ..+|.+|+..|++.+|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~ 167 (225)
T 2yhc_A 88 NMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVV 167 (225)
T ss_dssp HHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHH
T ss_pred HHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 876 58999999999999999998 2221 57899999999999999
Q ss_pred HHHHHHHhcCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcH
Q 017383 138 DDCTEALNLDDRYI---KAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 185 (372)
Q Consensus 138 ~~~~~Al~l~p~~~---~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~ 185 (372)
..|+++++.+|+++ .+++.+|.++..+|++++|+..++.+....|++.
T Consensus 168 ~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~~~~~~ 218 (225)
T 2yhc_A 168 NRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAANSSNTL 218 (225)
T ss_dssp HHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCCch
Confidence 99999999999985 7899999999999999999999999999888753
No 89
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.54 E-value=2.2e-13 Score=126.45 Aligned_cols=142 Identities=13% Similarity=0.070 Sum_probs=115.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
.+|++++|+..|++++..+|+.........+...+...|++++|+.+|+++++.+|. +.+++++|.++..+|++++|+.
T Consensus 142 ~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~ 221 (291)
T 3mkr_A 142 KLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEG 221 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHH
Confidence 779999999999999999987433322111223344558999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHH-HHHHHHHHHccCCCcHHHHHHHHHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKE-SIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEV 202 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~-A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~~~ 202 (372)
.|++++.++|+++.+++++|.++..+|++++ +..++++++.++|+++.+.. +.+....|.+.+
T Consensus 222 ~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~~~~d-~~~~~~~fd~~~ 285 (291)
T 3mkr_A 222 VLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKE-YRAKENDFDRLV 285 (291)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCChHHHH-HHHHHHHHHHHH
Confidence 9999999999999999999999999999976 56888999999999987754 444444555443
No 90
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.54 E-value=8.7e-14 Score=115.94 Aligned_cols=118 Identities=14% Similarity=0.133 Sum_probs=106.6
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++..+|.+. ..+..+|.+++..|+|++|+.+|.+++.++|. ..+++++|.++..+|++++|+.
T Consensus 25 ~~~~~~~A~~~~~~al~~~~~~~--~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 102 (166)
T 1a17_A 25 KAKDYENAIKFYSQAIELNPSNA--IYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALR 102 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HccCHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHH
Confidence 67999999999999999999854 45779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHH--HHHcCCHHHHHHHHHHHHc
Q 017383 139 DCTEALNLDDRYIKAYSRRATA--RKELGKLKESIEDSEFALR 179 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~--~~~lg~~~~A~~~~~~al~ 179 (372)
+|++++.++|.+..++..++.+ +...|++++|+..+.++..
T Consensus 103 ~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~ 145 (166)
T 1a17_A 103 DYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRS 145 (166)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHH
Confidence 9999999999999988555554 8888999999988876543
No 91
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.54 E-value=5.8e-14 Score=141.46 Aligned_cols=127 Identities=14% Similarity=0.110 Sum_probs=67.2
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|++++...|.+..+ +..+|.+|...|++++|+.+|+++++.+|. ..+|..+|.+|...|++++|+.
T Consensus 419 ~~g~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~ 496 (597)
T 2xpi_A 419 IEGEHDQAISAYTTAARLFQGTHLP--YLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAIN 496 (597)
T ss_dssp HHTCHHHHHHHHHHHHHTTTTCSHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCccchHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHH
Confidence 3455555555555555555543222 335555555555555555555555555554 5555555555555555555555
Q ss_pred HHHHHHhc------CCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH
Q 017383 139 DCTEALNL------DDRY-IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 139 ~~~~Al~l------~p~~-~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
.|++++.+ +|+. ..+|..+|.++...|++++|+..|++++.++|++..++
T Consensus 497 ~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~ 553 (597)
T 2xpi_A 497 HFQNALLLVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDANVH 553 (597)
T ss_dssp HHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCHHHH
T ss_pred HHHHHHHhhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHH
Confidence 55555554 3432 45555555555555555555555555555555554443
No 92
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.53 E-value=4.6e-14 Score=142.23 Aligned_cols=133 Identities=20% Similarity=0.181 Sum_probs=124.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHcc------CCC--HHHHHHHHHHHHHhc
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL------SPT--AVAYANRAMAYLKLR 131 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~------~p~--~~~~~~la~~~~~~g 131 (372)
..|++++|+..|++++..+|.++. .+..+|.+|...|++++|+.+|++++++ +|+ ..+|..+|.+|...|
T Consensus 453 ~~g~~~~A~~~~~~~~~~~~~~~~--~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~g 530 (597)
T 2xpi_A 453 QLGNILLANEYLQSSYALFQYDPL--LLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKLK 530 (597)
T ss_dssp HHTCHHHHHHHHHHHHHHCCCCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHTT
T ss_pred HcCCHHHHHHHHHHHHHhCCCChH--HHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHhc
Confidence 679999999999999999998554 4779999999999999999999999998 676 789999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
++++|+..|++++.++|++..+|..+|.+|...|++++|+..|+++++++|++..++..+..+
T Consensus 531 ~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~ 593 (597)
T 2xpi_A 531 MYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNEIMASDLLKRA 593 (597)
T ss_dssp CHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999988777654
No 93
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.53 E-value=6.3e-14 Score=132.90 Aligned_cols=119 Identities=15% Similarity=0.138 Sum_probs=108.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch-------------HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD-------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAM 125 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~-------------a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~ 125 (372)
..|++++|+..|++++.++|.+.. +.++.++|.+|+..|+|++|+.+|+++++++|+ ..+|+++|.
T Consensus 159 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 238 (336)
T 1p5q_A 159 KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGE 238 (336)
T ss_dssp HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 679999999999999999998631 456889999999999999999999999999998 999999999
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHH
Q 017383 126 AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI-EDSEFAL 178 (372)
Q Consensus 126 ~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~-~~~~~al 178 (372)
+|..+|++++|+.+|++|+.++|++..++..+|.++..+|++++|. ..|++++
T Consensus 239 ~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~ 292 (336)
T 1p5q_A 239 AHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMF 292 (336)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999884 3444443
No 94
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.52 E-value=1.2e-13 Score=139.71 Aligned_cols=126 Identities=14% Similarity=0.036 Sum_probs=119.4
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|+++++.+|.+.. ++..+|.+|...|++++|+.+|+++++++|+ ..+++++|.+|..+|++++|+.
T Consensus 35 ~~g~~~~A~~~~~~al~~~p~~~~--~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 112 (568)
T 2vsy_A 35 GMGDTTAGEMAVQRGLALHPGHPE--AVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAA 112 (568)
T ss_dssp HHTCHHHHHHHHHHHHTTSTTCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHH--HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 679999999999999999998544 4779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHc---CCHHHHHHHHHHHHccCCCcHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKEL---GKLKESIEDSEFALRLEPQNQEI 187 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~l---g~~~~A~~~~~~al~l~P~~~~~ 187 (372)
.|+++++++|++..+++++|.++..+ |++++|...|++++..+|++...
T Consensus 113 ~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 164 (568)
T 2vsy_A 113 AYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGAVEP 164 (568)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCCSCH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcccCh
Confidence 99999999999999999999999999 99999999999999999986443
No 95
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.52 E-value=1.8e-14 Score=136.78 Aligned_cols=114 Identities=30% Similarity=0.451 Sum_probs=93.0
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-H-----------------HHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A-----------------VAYANRAMAYLKLRRFQEAEDDCTEAL 144 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~-----------------~~~~~la~~~~~~g~~~eA~~~~~~Al 144 (372)
.+..++.+|+.++..|+|++|+.+|.+++.++|+ . .+|+++|.||+.+|+|++|+.+|++++
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al 257 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVL 257 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4566889999999999999999999999999998 4 389999999999999999999999999
Q ss_pred hcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 145 NLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 145 ~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
.++|++..+|+++|.+|..+|++++|+.+|++++.++|++..++..+..+..
T Consensus 258 ~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 258 TEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988877766533
No 96
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.51 E-value=3.8e-14 Score=112.78 Aligned_cols=93 Identities=15% Similarity=0.129 Sum_probs=76.1
Q ss_pred HhhcHHHHHHHHHHHHcc---CCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHH
Q 017383 96 KQKKFKEAIDCYSRSIAL---SPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI 171 (372)
Q Consensus 96 ~~g~~~~Ai~~y~~al~~---~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~ 171 (372)
..|++++|+.+|++++++ +|+ ..++.++|.+|..+|+|++|+.+|++++.++|+++.+++++|.++..+|++++|+
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~ 81 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGV 81 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHH
Confidence 357888888888888888 466 7888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHccCCCcHHHH
Q 017383 172 EDSEFALRLEPQNQEIK 188 (372)
Q Consensus 172 ~~~~~al~l~P~~~~~~ 188 (372)
..|++++.+.|+++.+.
T Consensus 82 ~~~~~al~~~p~~~~~~ 98 (117)
T 3k9i_A 82 ELLLKIIAETSDDETIQ 98 (117)
T ss_dssp HHHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHhCCCcHHHH
Confidence 88888888888887654
No 97
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.51 E-value=2.5e-14 Score=142.23 Aligned_cols=130 Identities=15% Similarity=0.158 Sum_probs=114.7
Q ss_pred CCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHh
Q 017383 53 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL 130 (372)
Q Consensus 53 ~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~ 130 (372)
...|..| ..|++++|+..|+++++.+|.+ +.++.++|.+|+..|+|++|+.+|+++++++|+ +.+++++|.+|..+
T Consensus 10 ~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~--~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~ 87 (477)
T 1wao_1 10 KTQANDYFKAKDYENAIKFYSQAIELNPSN--AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMAL 87 (477)
T ss_dssp SSSSSSTTTTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHhCCcc--HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 3445555 8899999999999999999985 455779999999999999999999999999998 99999999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHccCCCc
Q 017383 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATA--RKELGKLKESIEDSE-----------FALRLEPQN 184 (372)
Q Consensus 131 g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~--~~~lg~~~~A~~~~~-----------~al~l~P~~ 184 (372)
|++++|+.+|++|++++|++..++..+|.+ +...|++++|+..++ +++.++|+.
T Consensus 88 g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 88 GKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp TCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 999999999999999999999999999998 888999999999999 888888765
No 98
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.51 E-value=2.1e-13 Score=125.91 Aligned_cols=102 Identities=36% Similarity=0.549 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
.+..++.+|..++..|+|++|+.+|++++.++|+ ..+++++|.+|..+|++++|+.+|++++.++|++..+++++|.++
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~ 82 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQ 82 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 4556889999999999999999999999999998 999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHccCCCc
Q 017383 162 KELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 162 ~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
..+|++++|+.+|++++.++|++
T Consensus 83 ~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 83 LEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999976
No 99
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=1.7e-13 Score=109.94 Aligned_cols=104 Identities=16% Similarity=0.126 Sum_probs=96.3
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHH
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~ 137 (372)
+..|++++|+..|.+++..+|.+.. ++..+|.+++..|+|++|+.+|++++.++|+ ..+++++|.++..+|++++|+
T Consensus 15 ~~~~~~~~A~~~~~~al~~~p~~~~--~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~ 92 (126)
T 3upv_A 15 FTKSDWPNAVKAYTEMIKRAPEDAR--GYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASAL 92 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCChH--HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHH
Confidence 3779999999999999999999554 4779999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHhcC------CCCHHHHHHHHHHHHHc
Q 017383 138 DDCTEALNLD------DRYIKAYSRRATARKEL 164 (372)
Q Consensus 138 ~~~~~Al~l~------p~~~~a~~~lg~~~~~l 164 (372)
.+|++++.++ |++..++..++.+...+
T Consensus 93 ~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 93 ETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999 99999998888877653
No 100
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.49 E-value=2.5e-13 Score=133.65 Aligned_cols=130 Identities=18% Similarity=0.149 Sum_probs=109.7
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HH------HHHHHHHHHHH---
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AV------AYANRAMAYLK--- 129 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~------~~~~la~~~~~--- 129 (372)
..|++++|+..|.+++...|.+..+ +..+|.+++..|++++|+.+|++++.++|. .. ++.++|.++..
T Consensus 350 ~~~~~~~A~~~~~~~~~~~~~~~~~--~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 427 (514)
T 2gw1_A 350 RENKFDDCETLFSEAKRKFPEAPEV--PNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPT 427 (514)
T ss_dssp TTTCHHHHHHHHHHHHHHSTTCSHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCC
T ss_pred HcCCHHHHHHHHHHHHHHcccCHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhh
Confidence 6788888888888888888875554 668888888888888888888888888766 33 88888888888
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHH
Q 017383 130 LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQL 191 (372)
Q Consensus 130 ~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l 191 (372)
.|++++|+..|++++.++|++..+++.+|.++..+|++++|+..|++++.++|++..++..+
T Consensus 428 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 489 (514)
T 2gw1_A 428 VENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTMEEKLQAI 489 (514)
T ss_dssp TTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccHHHHHHH
Confidence 88888888888888888888888888888888888999899888888888888888776554
No 101
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.49 E-value=3.1e-13 Score=117.88 Aligned_cols=101 Identities=28% Similarity=0.268 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~ 162 (372)
++..++.+|..++..|+|++|+.+|++++ +|++.+++++|.+|..+|++++|+.+|++++.++|+++.+++++|.++.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~ 82 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQ--DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYY 82 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHH
Confidence 45567899999999999999999999996 5678899999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHccCCCcH
Q 017383 163 ELGKLKESIEDSEFALRLEPQNQ 185 (372)
Q Consensus 163 ~lg~~~~A~~~~~~al~l~P~~~ 185 (372)
.+|++++|+.+|++++.+.|++.
T Consensus 83 ~~~~~~~A~~~~~~al~~~~~~~ 105 (213)
T 1hh8_A 83 QTEKYDLAIKDLKEALIQLRGNQ 105 (213)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCS
T ss_pred HcccHHHHHHHHHHHHHhCCCcc
Confidence 99999999999999999888765
No 102
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.48 E-value=1.3e-12 Score=103.74 Aligned_cols=109 Identities=33% Similarity=0.459 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc
Q 017383 86 SEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKEL 164 (372)
Q Consensus 86 ~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~l 164 (372)
+++.+|.+++..|++++|+.+|.+++..+|. ..++..+|.++...|++++|+..+++++..+|.+..+++.+|.++...
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQ 82 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHh
Confidence 4678999999999999999999999999998 889999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 165 GKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 165 g~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
|++++|+..|++++.+.|.+..++..+..+
T Consensus 83 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~ 112 (136)
T 2fo7_A 83 GDYDEAIEYYQKALELDPRSAEAWYNLGNA 112 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHH
Confidence 999999999999999999988776554443
No 103
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.48 E-value=8.8e-13 Score=122.88 Aligned_cols=137 Identities=9% Similarity=0.003 Sum_probs=118.1
Q ss_pred hhhHHHHHhhhh-cCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HH-HHHHHHHHHHHhcCHHHHHHHHH
Q 017383 65 YDPVSHISSSLM-NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AV-AYANRAMAYLKLRRFQEAEDDCT 141 (372)
Q Consensus 65 ~~A~~~~~~al~-~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~-~~~~la~~~~~~g~~~eA~~~~~ 141 (372)
++|+..|++++. ++|++..+ |..+|..+...|++++|+.+|+++++++|. .. +|.++|.++...|++++|+..|+
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~--~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 158 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLL--YFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFK 158 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHH--HHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 899999999999 79985444 679999999999999999999999999998 65 89999999999999999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHH-cCCHHHHHHHHHHHHccCCCcHHHHH----------HHHHHHHHHHHHHH
Q 017383 142 EALNLDDRYIKAYSRRATARKE-LGKLKESIEDSEFALRLEPQNQEIKK----------QLAEVKSLYEKEVF 203 (372)
Q Consensus 142 ~Al~l~p~~~~a~~~lg~~~~~-lg~~~~A~~~~~~al~l~P~~~~~~~----------~l~~a~~~~~~~~~ 203 (372)
+|++++|....+|...+..... .|++++|...|+++++++|++..++. .+.+|...|++++.
T Consensus 159 ~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 159 KAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 9999999998888776665443 79999999999999999999988763 34455555665555
No 104
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.47 E-value=1.9e-13 Score=115.08 Aligned_cols=99 Identities=8% Similarity=0.124 Sum_probs=92.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++.++|.+. .++..+|.+|+..|+|++|+.+|++++.++|+ ..+|+++|.+|..+|++++|+.
T Consensus 23 ~~g~~~~A~~~~~~al~~~p~~~--~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~ 100 (164)
T 3sz7_A 23 ARKEYSKAIDLYTQALSIAPANP--IYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKE 100 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCcCH--HHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHH
Confidence 77999999999999999999954 45779999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATA 160 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~ 160 (372)
+|++++.++|++..+|+.++.+
T Consensus 101 ~~~~al~~~p~~~~~~~~~~l~ 122 (164)
T 3sz7_A 101 AYEKGIEAEGNGGSDAMKRGLE 122 (164)
T ss_dssp HHHHHHHHHSSSCCHHHHHHHH
T ss_pred HHHHHHHhCCCchHHHHHHHHH
Confidence 9999999999999988887753
No 105
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.47 E-value=8.8e-14 Score=116.91 Aligned_cols=108 Identities=14% Similarity=0.086 Sum_probs=95.9
Q ss_pred CCCCCchhhHHHHHhhhhc------------------CCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHH
Q 017383 59 NSYSRNYDPVSHISSSLMN------------------EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVA 119 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~------------------~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~ 119 (372)
|..|+|++|+..|.+++.. +|. .+.++.++|.+|+..|+|++|+.+|+++|.++|+ +.+
T Consensus 22 ~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a 99 (162)
T 3rkv_A 22 FVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK--NIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKA 99 (162)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT--HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH--HHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHH
Confidence 4789999999999999998 444 4456889999999999999999999999999999 999
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHcCCHH
Q 017383 120 YANRAMAYLKLRRFQEAEDDCTEALNLDDRYI-KAYSRRATARKELGKLK 168 (372)
Q Consensus 120 ~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~-~a~~~lg~~~~~lg~~~ 168 (372)
|+++|.+|..+|+|++|+.+|++++.++|++. .+...++.+...++++.
T Consensus 100 ~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~ 149 (162)
T 3rkv_A 100 LFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKK 149 (162)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 66777777776655443
No 106
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.47 E-value=4.3e-13 Score=107.23 Aligned_cols=105 Identities=18% Similarity=0.180 Sum_probs=99.2
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|++++..+|.+ ..++..+|.+++..|++++|+.+|++++.++|. ..++.++|.++..+|++++|+.
T Consensus 28 ~~~~~~~A~~~~~~al~~~~~~--~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 105 (133)
T 2lni_A 28 QKGDYPQAMKHYTEAIKRNPKD--AKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMD 105 (133)
T ss_dssp HTTCSHHHHHHHHHHHTTCTTC--HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHcCCCc--HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHH
Confidence 7799999999999999999985 445779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGK 166 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~ 166 (372)
+|++++.++|.+..++..+|.++..+|+
T Consensus 106 ~~~~~~~~~p~~~~~~~~l~~~~~~~~~ 133 (133)
T 2lni_A 106 VYQKALDLDSSCKEAADGYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHCGGGTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHHhcC
Confidence 9999999999999999999999998875
No 107
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.46 E-value=4.6e-13 Score=106.25 Aligned_cols=106 Identities=19% Similarity=0.151 Sum_probs=100.2
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++..+|.+ ...+..+|.+++..|++++|+.+|.+++..+|+ ..++.++|.++..+|++++|+.
T Consensus 24 ~~~~~~~A~~~~~~~~~~~~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 101 (131)
T 2vyi_A 24 KVENFEAAVHFYGKAIELNPAN--AVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVA 101 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HccCHHHHHHHHHHHHHcCCCC--HHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHH
Confidence 6789999999999999999985 445779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKL 167 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~ 167 (372)
++++++.++|++..++..+|.++..+|++
T Consensus 102 ~~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 102 YYKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999875
No 108
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.46 E-value=1.5e-13 Score=109.29 Aligned_cols=104 Identities=11% Similarity=0.050 Sum_probs=87.3
Q ss_pred CCCCchhhHHHHHhhhhc---CCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHH
Q 017383 60 SYSRNYDPVSHISSSLMN---EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQE 135 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~---~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~e 135 (372)
..|++++|+..|++++.. +|. ...++..+|.+|+..|+|++|+.+|+++++++|+ ..+++++|.++..+|++++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~--~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD--LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc--HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHH
Confidence 358999999999999999 465 4556889999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 017383 136 AEDDCTEALNLDDRYIKAYSRRATARKELG 165 (372)
Q Consensus 136 A~~~~~~Al~l~p~~~~a~~~lg~~~~~lg 165 (372)
|+..|++++.++|+++........+....+
T Consensus 80 A~~~~~~al~~~p~~~~~~~~~~ai~~~~~ 109 (117)
T 3k9i_A 80 GVELLLKIIAETSDDETIQSYKQAILFYAD 109 (117)
T ss_dssp HHHHHHHHHHHHCCCHHHHHTHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999877654444443333
No 109
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.46 E-value=3.6e-13 Score=116.96 Aligned_cols=121 Identities=13% Similarity=0.095 Sum_probs=104.2
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCch--------------HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHH
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPD--------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANR 123 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~--------------a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~l 123 (372)
+..|+|++|+..|.+++...|..+. ..++.++|.+|+..|+|++|+.+|++++.++|. ..+++++
T Consensus 49 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 128 (198)
T 2fbn_A 49 FKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKL 128 (198)
T ss_dssp HHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 3789999999999999999887651 256889999999999999999999999999998 9999999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHHc
Q 017383 124 AMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESI-EDSEFALR 179 (372)
Q Consensus 124 a~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~-~~~~~al~ 179 (372)
|.+|..+|++++|+.+|++++.++|++..++..++.++..+|++.++. ..|.+.+.
T Consensus 129 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~ 185 (198)
T 2fbn_A 129 GVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFD 185 (198)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999988887 44444443
No 110
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.46 E-value=3.4e-13 Score=121.46 Aligned_cols=135 Identities=25% Similarity=0.256 Sum_probs=114.6
Q ss_pred CCCCchhhHHHHHhhhhcC-----CC-CchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC--------CC-HHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNE-----ES-TPDATSEKELGNECFKQKKFKEAIDCYSRSIALS--------PT-AVAYANRA 124 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~-----p~-~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~--------p~-~~~~~~la 124 (372)
..|++++|+.+|++++... ++ ...+.++..+|.+|+..|+|++|+.+|.+++.+. |. ..++.++|
T Consensus 13 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~ 92 (283)
T 3edt_B 13 GLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLA 92 (283)
T ss_dssp CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 6789999999999999842 11 2256678899999999999999999999999873 33 88999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc--------CCCcHHHH
Q 017383 125 MAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRL--------EPQNQEIK 188 (372)
Q Consensus 125 ~~~~~~g~~~eA~~~~~~Al~l--------~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l--------~P~~~~~~ 188 (372)
.+|..+|++++|+.+|++++.+ +|....++.++|.++..+|++++|+..|++++.+ .|....++
T Consensus 93 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 172 (283)
T 3edt_B 93 VLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTK 172 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 9999999999999999999998 5778899999999999999999999999999998 55555554
Q ss_pred HHHHHH
Q 017383 189 KQLAEV 194 (372)
Q Consensus 189 ~~l~~a 194 (372)
..++.+
T Consensus 173 ~~la~~ 178 (283)
T 3edt_B 173 NNLASC 178 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 111
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.46 E-value=1.3e-13 Score=115.88 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=87.6
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCc----------hHHHHHHHHHHHHHhhcHHHHHHHHHHHHcc-------CCC-HHHH
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTP----------DATSEKELGNECFKQKKFKEAIDCYSRSIAL-------SPT-AVAY 120 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~----------~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~-------~p~-~~~~ 120 (372)
+..|+|++|+..|+++|+++|.++ .+.+|.++|.++..+|+|++|+.+|+++|++ +|+ ..+|
T Consensus 22 ~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~ 101 (159)
T 2hr2_A 22 LVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLW 101 (159)
T ss_dssp HHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHH
T ss_pred HHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHH
Confidence 467999999999999999999832 2347889999999999999999999999999 999 8888
Q ss_pred ----HHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHH
Q 017383 121 ----ANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 155 (372)
Q Consensus 121 ----~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~ 155 (372)
+++|.++..+|++++|+.+|++|++++|++...+-
T Consensus 102 ~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~ 140 (159)
T 2hr2_A 102 ISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETP 140 (159)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCT
T ss_pred HHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHH
Confidence 99999999999999999999999999998854433
No 112
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.45 E-value=8.3e-14 Score=132.22 Aligned_cols=128 Identities=12% Similarity=0.045 Sum_probs=80.3
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCch---------------HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHH
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPD---------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 122 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~---------------a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~ 122 (372)
+..|+|++|+..|.+++...|.+.. ..++.++|.+|+..|+|++|+.+|+++++++|+ ..+|++
T Consensus 190 ~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 269 (338)
T 2if4_A 190 FKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFR 269 (338)
T ss_dssp CSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 4789999999999999999987431 026889999999999999999999999999998 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHccCCCcHH
Q 017383 123 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA-RKELGKLKESIEDSEFALRLEPQNQE 186 (372)
Q Consensus 123 la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~-~~~lg~~~~A~~~~~~al~l~P~~~~ 186 (372)
+|.+|..+|+|++|+.+|++++.++|++..++..++.+ ....+..+++...|.+++.+.|+++.
T Consensus 270 lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~~ 334 (338)
T 2if4_A 270 RGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGGA 334 (338)
T ss_dssp HHHHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 99999999999999999999999999999999999988 55667888999999999999998764
No 113
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.45 E-value=1.1e-13 Score=137.54 Aligned_cols=123 Identities=35% Similarity=0.651 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 017383 84 ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARK 162 (372)
Q Consensus 84 a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~ 162 (372)
+..++.+|..++..|+|++|+.+|+++++++|+ +.+|.++|.+|..+|++++|+.+|++|++++|+++.+++++|.++.
T Consensus 6 a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~ 85 (477)
T 1wao_1 6 AEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNM 85 (477)
T ss_dssp HTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 344667899999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHHHHHhhh
Q 017383 163 ELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQKA 206 (372)
Q Consensus 163 ~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~~~~~~~ 206 (372)
.+|++++|+.+|+++++++|++..++..+..+...+......++
T Consensus 86 ~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A 129 (477)
T 1wao_1 86 ALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERA 129 (477)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888877666555444333
No 114
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.45 E-value=3.9e-13 Score=132.25 Aligned_cols=123 Identities=13% Similarity=0.149 Sum_probs=87.6
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++..+|.+..+ +..+|.+++..|++++|+.+|++++.++|. ..++.++|.++...|++++|+.
T Consensus 282 ~~~~~~~A~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 359 (514)
T 2gw1_A 282 DRNDSTEYYNYFDKALKLDSNNSSV--YYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCET 359 (514)
T ss_dssp TSSCCTTGGGHHHHHHTTCTTCTHH--HHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHH
T ss_pred HCCCHHHHHHHHHHHhhcCcCCHHH--HHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHH
Confidence 5677777777777777777664444 556777777777777777777777777776 6667777777777777777777
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
.+++++..+|+++.+++.+|.++..+|++++|+..|++++.+.|++
T Consensus 360 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 405 (514)
T 2gw1_A 360 LFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKL 405 (514)
T ss_dssp HHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 7777777777777777777777777777777777777777766665
No 115
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.45 E-value=5.4e-13 Score=130.54 Aligned_cols=148 Identities=14% Similarity=0.073 Sum_probs=120.9
Q ss_pred CCCCchhhHHHHHhhhhcCC-------CCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCC--------C-HHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEE-------STPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP--------T-AVAYANR 123 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p-------~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p--------~-~~~~~~l 123 (372)
.+|++++|+.+|++++++.+ +...+..+.++|.+|+.+|+|++|+.+|++++++.+ . +.++.++
T Consensus 63 ~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~ 142 (472)
T 4g1t_A 63 LKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEE 142 (472)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHH
Confidence 78999999999999998521 112455688999999999999999999999998732 2 7889999
Q ss_pred HHHHHHhc--CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH---cCCHHHHHHHHHHHHccCCCcHHHHHHH-------
Q 017383 124 AMAYLKLR--RFQEAEDDCTEALNLDDRYIKAYSRRATARKE---LGKLKESIEDSEFALRLEPQNQEIKKQL------- 191 (372)
Q Consensus 124 a~~~~~~g--~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~---lg~~~~A~~~~~~al~l~P~~~~~~~~l------- 191 (372)
|.+++..| +|++|+.+|++|+.++|+++.++..+|.++.. .|++++|+..|++++.++|++..++..+
T Consensus 143 g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~ 222 (472)
T 4g1t_A 143 GWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKM 222 (472)
T ss_dssp HHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHH
Confidence 98887765 79999999999999999999999999988654 5778899999999999999998775433
Q ss_pred -------HHHHHHHHHHHHhhhh
Q 017383 192 -------AEVKSLYEKEVFQKAS 207 (372)
Q Consensus 192 -------~~a~~~~~~~~~~~~~ 207 (372)
.++...+++++...+.
T Consensus 223 ~~~~~~~~~a~~~~~~al~~~~~ 245 (472)
T 4g1t_A 223 REEGEEEGEGEKLVEEALEKAPG 245 (472)
T ss_dssp C------CHHHHHHHHHHHHCSS
T ss_pred HhhhhHHHHHHHHHHHHHHhCcc
Confidence 3555666666555443
No 116
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.45 E-value=2.3e-13 Score=134.52 Aligned_cols=114 Identities=15% Similarity=0.191 Sum_probs=103.1
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch-------------HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD-------------ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAM 125 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~-------------a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~ 125 (372)
..|+|++|+..|.+++.++|.+.. +.++.++|.+|++.|+|++|+.+|+++|.++|+ ..+|+++|.
T Consensus 280 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~ 359 (457)
T 1kt0_A 280 KGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGE 359 (457)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHH
Confidence 789999999999999999988631 566889999999999999999999999999998 999999999
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 017383 126 AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 173 (372)
Q Consensus 126 ~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~ 173 (372)
+|+.+|+|++|+.+|++|++++|++..++..++.++..+|++++|...
T Consensus 360 a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 360 AQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999888654
No 117
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.44 E-value=4.5e-13 Score=120.71 Aligned_cols=122 Identities=19% Similarity=0.167 Sum_probs=110.5
Q ss_pred CCCCchhhHHHHHhhhhcC-----CC-CchHHHHHHHHHHHHHhhcHHHHHHHHHHHHcc--------CCC-HHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNE-----ES-TPDATSEKELGNECFKQKKFKEAIDCYSRSIAL--------SPT-AVAYANRA 124 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~-----p~-~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~--------~p~-~~~~~~la 124 (372)
..|++++|+..|.+++... ++ ...+.++..+|.+|...|++++|+.+|.+++.+ +|. ..++.++|
T Consensus 55 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 134 (283)
T 3edt_B 55 DQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLA 134 (283)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 7899999999999999873 22 235667889999999999999999999999998 355 88999999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC
Q 017383 125 MAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 181 (372)
Q Consensus 125 ~~~~~~g~~~eA~~~~~~Al~l--------~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~ 181 (372)
.+|..+|++++|+..|++++.+ +|....++..+|.++..+|++++|+..|++++.+.
T Consensus 135 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~ 199 (283)
T 3edt_B 135 LLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRA 199 (283)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 77888999999999999999999999999999873
No 118
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.44 E-value=1.1e-12 Score=122.28 Aligned_cols=141 Identities=13% Similarity=0.074 Sum_probs=121.4
Q ss_pred hhhHHHHHhhhhcCCCCchHHHHHHHHHHHHH-------hhcH-------HHHHHHHHHHHc-cCCC-HHHHHHHHHHHH
Q 017383 65 YDPVSHISSSLMNEESTPDATSEKELGNECFK-------QKKF-------KEAIDCYSRSIA-LSPT-AVAYANRAMAYL 128 (372)
Q Consensus 65 ~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~-------~g~~-------~~Ai~~y~~al~-~~p~-~~~~~~la~~~~ 128 (372)
.+|+..|++++..+|.++.+ |+.+|..+.. .|++ ++|+.+|++|+. ++|+ ..+|.++|.++.
T Consensus 33 ~~a~~~~~~al~~~p~~~~~--w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~ 110 (308)
T 2ond_A 33 KRVMFAYEQCLLVLGHHPDI--WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEE 110 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHH--HHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHH--HHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 68899999999999996666 6688888764 4775 999999999999 7998 889999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH-----------HHHHHHHH
Q 017383 129 KLRRFQEAEDDCTEALNLDDRYIK-AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK-----------KQLAEVKS 196 (372)
Q Consensus 129 ~~g~~~eA~~~~~~Al~l~p~~~~-a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~-----------~~l~~a~~ 196 (372)
..|++++|+..|++++.++|.+.. +|..+|.++...|++++|...|++++.+.|.+..++ +.+.+|..
T Consensus 111 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~ 190 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFK 190 (308)
T ss_dssp HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHH
T ss_pred hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHH
Confidence 999999999999999999999987 999999999999999999999999999999876553 23445666
Q ss_pred HHHHHHHhhhh
Q 017383 197 LYEKEVFQKAS 207 (372)
Q Consensus 197 ~~~~~~~~~~~ 207 (372)
.|++++...|.
T Consensus 191 ~~~~al~~~p~ 201 (308)
T 2ond_A 191 IFELGLKKYGD 201 (308)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHhCCC
Confidence 66666665543
No 119
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.44 E-value=3e-13 Score=111.37 Aligned_cols=104 Identities=16% Similarity=0.033 Sum_probs=92.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++..+|.+..+ +..+|.+++..|+|++|+.+|++++.++|+ +.+++++|.+|..+|++++|+.
T Consensus 30 ~~g~~~~A~~~~~~al~~~p~~~~~--~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~ 107 (142)
T 2xcb_A 30 QAGKWDDAQKIFQALCMLDHYDARY--FLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAES 107 (142)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHccHHHHHHHHHHHHHhCCccHHH--HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHH
Confidence 7799999999999999999995555 779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELG 165 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg 165 (372)
+|++++.++|+++.....+..+...++
T Consensus 108 ~~~~al~~~p~~~~~~~~~~~~~~~l~ 134 (142)
T 2xcb_A 108 GFYSARALAAAQPAHEALAARAGAMLE 134 (142)
T ss_dssp HHHHHHHHHHTCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcchHHHHHHHHHHHH
Confidence 999999999988766655555544443
No 120
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.44 E-value=4.1e-13 Score=123.93 Aligned_cols=135 Identities=11% Similarity=0.052 Sum_probs=113.1
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++..+|.+. .++.++|.+|+..|+|++|+.+|+++++++|+ ..+++++|.+|..+|++++|+.
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~--~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~ 93 (281)
T 2c2l_A 16 VGRKYPEAAACYGRAITRNPLVA--VYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIA 93 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCH--HHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCccH--HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 67999999999999999999854 44779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCH-----HH--------------------------HHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHH
Q 017383 139 DCTEALNLDDRYI-----KA--------------------------YSRRATARKELGKLKESIEDSEFALRLEPQNQEI 187 (372)
Q Consensus 139 ~~~~Al~l~p~~~-----~a--------------------------~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~ 187 (372)
+|++++.++|++. .+ ...++.. ..|++++|+..|++++.++|++...
T Consensus 94 ~~~~al~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l--~~~~~~~A~~~~~~al~~~p~~~~~ 171 (281)
T 2c2l_A 94 NLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRL--IAAERERELEECQRNHEGHEDDGHI 171 (281)
T ss_dssp HHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH--HHHHHHHHHTTTSGGGTTTSCHHHH
T ss_pred HHHHHHHhCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH--HHHHHHHHHHHHHhhhccccchhhh
Confidence 9999999988652 11 1112222 3688999999999999999998777
Q ss_pred HHHHHHHHHHH
Q 017383 188 KKQLAEVKSLY 198 (372)
Q Consensus 188 ~~~l~~a~~~~ 198 (372)
...+.......
T Consensus 172 ~~~l~~~~~~~ 182 (281)
T 2c2l_A 172 RAQQACIEAKH 182 (281)
T ss_dssp THHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 66655444333
No 121
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.43 E-value=3.8e-13 Score=108.97 Aligned_cols=89 Identities=15% Similarity=0.108 Sum_probs=82.0
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC--------HHHHHHHHHHHHHh
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAYANRAMAYLKL 130 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~--------~~~~~~la~~~~~~ 130 (372)
|..|+|++|+.+|+++++++|.+.. ++.++|.+|+..|+|++|+.+|+++++++|+ +.+|.++|.++..+
T Consensus 19 ~~~~~~~~A~~~y~~Al~~~p~~~~--~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~ 96 (127)
T 4gcn_A 19 YKQKDFEKAHVHYDKAIELDPSNIT--FYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQ 96 (127)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHcCCHHHHHHHHHHHHHhCCCCHH--HHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHc
Confidence 4889999999999999999999544 5779999999999999999999999999875 46899999999999
Q ss_pred cCHHHHHHHHHHHHhcCCC
Q 017383 131 RRFQEAEDDCTEALNLDDR 149 (372)
Q Consensus 131 g~~~eA~~~~~~Al~l~p~ 149 (372)
|++++|+.+|++++..+|+
T Consensus 97 ~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 97 NDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp TCHHHHHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHhhCcC
Confidence 9999999999999999885
No 122
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.43 E-value=4.5e-13 Score=112.41 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=81.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcH----------HHHHHHHHHHHccCCC-HHHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKF----------KEAIDCYSRSIALSPT-AVAYANRAMAYL 128 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~----------~~Ai~~y~~al~~~p~-~~~~~~la~~~~ 128 (372)
..+.|++|+..|+++++++|.+.++ ++++|.++...+++ ++|+.+|++||+++|+ ..+|+++|.+|.
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea--~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~ 91 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADN--LTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHH
Confidence 3467899999999999999995555 77999999999875 5999999999999999 999999999999
Q ss_pred Hhc-----------CHHHHHHHHHHHHhcCCCCH
Q 017383 129 KLR-----------RFQEAEDDCTEALNLDDRYI 151 (372)
Q Consensus 129 ~~g-----------~~~eA~~~~~~Al~l~p~~~ 151 (372)
.+| ++++|+.+|++|++++|++.
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 885 89999999999999999984
No 123
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.42 E-value=9.4e-13 Score=121.70 Aligned_cols=121 Identities=16% Similarity=0.108 Sum_probs=76.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch----HHHHHHHHHHHHHhhcHHHHHHHHHHHHcc------CC-C-HHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKKFKEAIDCYSRSIAL------SP-T-AVAYANRAMAY 127 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~----a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~------~p-~-~~~~~~la~~~ 127 (372)
..|++++|+.+|.+++...+...+ +.++.++|.+|...|+|++|+.+|+++++. ++ . ..+++++|.+|
T Consensus 127 ~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y 206 (293)
T 3u3w_A 127 KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKAL 206 (293)
T ss_dssp TSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 455677777777777764333222 334666777777777777777777777642 11 1 55667777777
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcC-CHHHHHHHHHHHHcc
Q 017383 128 LKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELG-KLKESIEDSEFALRL 180 (372)
Q Consensus 128 ~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~lg~~~~~lg-~~~~A~~~~~~al~l 180 (372)
..+|+|++|+.++++|+.+.+.. +.+|+++|.++..+| .+++|+.+|++|+.+
T Consensus 207 ~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i 266 (293)
T 3u3w_A 207 YLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 77777777777777777664332 566777777777777 357777777666644
No 124
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.42 E-value=1.2e-13 Score=128.78 Aligned_cols=130 Identities=11% Similarity=0.042 Sum_probs=110.2
Q ss_pred CCCCC-CCCCchhhHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHH
Q 017383 55 SPSGN-SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYAN 122 (372)
Q Consensus 55 ~~~~y-~~g~~~~A~~~~~~al~~~p~~~----~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~ 122 (372)
+|..| ..|++++|+.+|++++.+.+... .+.++.++|.+|.. |+|++|+.+|++++.+.+. ..++.+
T Consensus 82 lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~ 160 (307)
T 2ifu_A 82 AGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGK 160 (307)
T ss_dssp HHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHH
Confidence 34445 67999999999999998754321 35678899999988 9999999999999998653 578999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHH
Q 017383 123 RAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 186 (372)
Q Consensus 123 la~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~ 186 (372)
+|.+|..+|+|++|+.+|++++.+.+.+ ..++..+|.++..+|++++|+.+|++++ ++|.+..
T Consensus 161 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~~ 229 (307)
T 2ifu_A 161 ASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFSG 229 (307)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTSTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCCC
Confidence 9999999999999999999999986543 4578889999999999999999999999 9997643
No 125
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.41 E-value=4.3e-13 Score=111.73 Aligned_cols=105 Identities=12% Similarity=0.057 Sum_probs=91.6
Q ss_pred HHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 102 EAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 102 ~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
.+-..|++++.++|+ ..+++++|.+++..|+|++|+..|++++.++|.++.+|+.+|.++..+|++++|+.+|++++.+
T Consensus 5 ~~~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 5 SGGGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp -CCCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 344578999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHHHH----------HHHHHHHHHHHHHhhh
Q 017383 181 EPQNQEIKKQ----------LAEVKSLYEKEVFQKA 206 (372)
Q Consensus 181 ~P~~~~~~~~----------l~~a~~~~~~~~~~~~ 206 (372)
+|+++.++.. +.+|...|++++...+
T Consensus 85 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 120 (148)
T 2vgx_A 85 DIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIA 120 (148)
T ss_dssp STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHT
T ss_pred CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCc
Confidence 9999887644 4555556666555544
No 126
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.41 E-value=3.2e-13 Score=129.25 Aligned_cols=123 Identities=11% Similarity=0.122 Sum_probs=89.6
Q ss_pred CCCCchhhHHHHHhhhhcCCCCc-----hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTP-----DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAY 127 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~-----~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~la~~~ 127 (372)
..|++++|+.++.+++.+.+... .+.++..+|.+|...|+|++|+.+|.+++.+.+. +.++.++|.+|
T Consensus 155 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y 234 (383)
T 3ulq_A 155 YMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCK 234 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 66777788888877777644332 2445677777787888888888888887776432 45777788888
Q ss_pred HHhcCHHHHHHHHHHHHh-----cC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 017383 128 LKLRRFQEAEDDCTEALN-----LD-DRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 128 ~~~g~~~eA~~~~~~Al~-----l~-p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P 182 (372)
..+|++++|+.++++|+. .+ |..+.+++++|.++..+|++++|+.+|++++.+.+
T Consensus 235 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 235 NSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 888888888888888777 45 66677777788888888888888888887777643
No 127
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.41 E-value=1.3e-13 Score=107.33 Aligned_cols=94 Identities=30% Similarity=0.506 Sum_probs=86.9
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYS 155 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~ 155 (372)
.+..++.+|.+++..|+|++|+.+|++++.++|+ +.+++++|.++..+|++++|+.+|++++.++|++ ..+++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 4556889999999999999999999999999998 9999999999999999999999999999999999 99999
Q ss_pred HHHHHHHHcCCHHHHHHHHHH
Q 017383 156 RRATARKELGKLKESIEDSEF 176 (372)
Q Consensus 156 ~lg~~~~~lg~~~~A~~~~~~ 176 (372)
++|.++..+|+++.|+..|++
T Consensus 83 ~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 83 RLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHhHhhhHhHHHH
Confidence 999999999998888776654
No 128
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.40 E-value=1.1e-12 Score=125.45 Aligned_cols=134 Identities=8% Similarity=0.088 Sum_probs=113.4
Q ss_pred CCCCchhhHHHHHhhhhcC---CCC-chHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC--------HHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNE---EST-PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAYANRAMAY 127 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~---p~~-~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~--------~~~~~~la~~~ 127 (372)
..|++++|+..|.+++.+. ++. ..+.++..+|.+|+..|++++|+.+|.+++++.+. +.++.++|.+|
T Consensus 115 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~ 194 (383)
T 3ulq_A 115 DQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNF 194 (383)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHH
Confidence 7799999999999999872 222 25677899999999999999999999999998432 67899999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc-----C-CCcHHHHHHHHH
Q 017383 128 LKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRL-----E-PQNQEIKKQLAE 193 (372)
Q Consensus 128 ~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~lg~~~~~lg~~~~A~~~~~~al~l-----~-P~~~~~~~~l~~ 193 (372)
..+|++++|+.+|++|+.+.+.. ..+++++|.++..+|++++|+.+|++++.+ + |....++..++.
T Consensus 195 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~ 272 (383)
T 3ulq_A 195 LDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQ 272 (383)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHH
Confidence 99999999999999999985543 468999999999999999999999999994 5 665555444433
No 129
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.39 E-value=5.9e-13 Score=127.42 Aligned_cols=128 Identities=16% Similarity=0.087 Sum_probs=96.0
Q ss_pred CCCCC-CCCCchhhHHHHHhhhhcCCCCc-----hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCC---C----HHHHH
Q 017383 55 SPSGN-SYSRNYDPVSHISSSLMNEESTP-----DATSEKELGNECFKQKKFKEAIDCYSRSIALSP---T----AVAYA 121 (372)
Q Consensus 55 ~~~~y-~~g~~~~A~~~~~~al~~~p~~~-----~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p---~----~~~~~ 121 (372)
+|..| ..|+++.|+.++.+++.+.+... .+.++..+|.+|...|+|++|+.+|.+++.+.+ + +.++.
T Consensus 147 lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 226 (378)
T 3q15_A 147 VAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLL 226 (378)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 33344 67788888888888887554322 345677888888888888888888888887632 1 56778
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHh-----cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 017383 122 NRAMAYLKLRRFQEAEDDCTEALN-----LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 122 ~la~~~~~~g~~~eA~~~~~~Al~-----l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P 182 (372)
++|.+|..+|++++|+.++++++. .+|....+++++|.++..+|++++|+.+|++++.+.+
T Consensus 227 ~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 227 NIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 888888888888888888888888 6777777888888888888888888888888887754
No 130
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.39 E-value=1e-12 Score=105.50 Aligned_cols=91 Identities=15% Similarity=0.060 Sum_probs=80.3
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|++++..+|.+..+ ++.+|.++...|++++|+.+|+++++++|+ ..+++++|.+|..+|++++|+.
T Consensus 29 ~~g~~~~A~~~~~~al~~~P~~~~a--~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~ 106 (121)
T 1hxi_A 29 KLANLAEAALAFEAVCQKEPEREEA--WRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALA 106 (121)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 6799999999999999999996555 679999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHH
Q 017383 139 DCTEALNLDDRYIK 152 (372)
Q Consensus 139 ~~~~Al~l~p~~~~ 152 (372)
.|+++++++|++..
T Consensus 107 ~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 107 SLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHC-------
T ss_pred HHHHHHHhCcCCCC
Confidence 99999999998754
No 131
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.39 E-value=2.5e-12 Score=125.77 Aligned_cols=125 Identities=11% Similarity=0.050 Sum_probs=94.6
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHh--------
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL-------- 130 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~-------- 130 (372)
..|++++|+..|++++..+|....+ +..+|.+|...|++++|+.+|.++++.+|+ +.++.++|.+|...
T Consensus 225 ~~~~~~~a~~~~~~al~~~~~~~~~--~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~ 302 (472)
T 4g1t_A 225 EGEEEGEGEKLVEEALEKAPGVTDV--LRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLR 302 (472)
T ss_dssp -----CHHHHHHHHHHHHCSSCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC-
T ss_pred hhhHHHHHHHHHHHHHHhCccHHHH--HHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHH
Confidence 3467777888888888877774444 567888888888888888888888888887 77888888877543
Q ss_pred -----------cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHH
Q 017383 131 -----------RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 186 (372)
Q Consensus 131 -----------g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~ 186 (372)
+.+++|+..+++++.++|.+..+++.+|.++..+|++++|+.+|++++.++|++..
T Consensus 303 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~~~~ 369 (472)
T 4g1t_A 303 ENGMYGKRKLLELIGHAVAHLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELTPVA 369 (472)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCCChH
Confidence 34667888888888888888888888888888888888888888888888877644
No 132
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.38 E-value=1.8e-12 Score=118.65 Aligned_cols=122 Identities=20% Similarity=0.205 Sum_probs=109.5
Q ss_pred CCCCchhhHHHHHhhhhcC------CCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC--------CC-HHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNE------ESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS--------PT-AVAYANRA 124 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~------p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~--------p~-~~~~~~la 124 (372)
..|++++|+..|.+++... .....+.++..+|.+++..|++++|+.+|++++.+. |. ..++.++|
T Consensus 81 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la 160 (311)
T 3nf1_A 81 DQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLA 160 (311)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Confidence 7899999999999999873 222356678899999999999999999999999874 33 78899999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC
Q 017383 125 MAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLE 181 (372)
Q Consensus 125 ~~~~~~g~~~eA~~~~~~Al~l--------~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~ 181 (372)
.++..+|++++|+.++++++.+ +|....+++.+|.++..+|++++|+..|++++.+.
T Consensus 161 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 225 (311)
T 3nf1_A 161 LLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRA 225 (311)
T ss_dssp HHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999998 77788999999999999999999999999999864
No 133
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.38 E-value=4.3e-13 Score=114.43 Aligned_cols=152 Identities=12% Similarity=-0.007 Sum_probs=118.2
Q ss_pred HhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHH
Q 017383 16 LNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNEC 94 (372)
Q Consensus 16 ~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~ 94 (372)
+-..++|++++......+...+....- ....|..| ..|++++|+..|++++..+| ++.. +...|.+.
T Consensus 16 ~~~~g~~~~A~~~~~~al~~~P~~~~a---------~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~--~~~~~~~~ 83 (176)
T 2r5s_A 16 LLQQGEHAQALNVIQTLSDELQSRGDV---------KLAKADCLLETKQFELAQELLATIPLEYQ-DNSY--KSLIAKLE 83 (176)
T ss_dssp HHHTTCHHHHHHHHHTSCHHHHTSHHH---------HHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHH--HHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHCCCcHHH---------HHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHH--HHHHHHHH
Confidence 334467777777776665544411100 01122233 78999999999999999998 5544 33445443
Q ss_pred -HHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCCHHHH
Q 017383 95 -FKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAYSRRATARKELGKLKES 170 (372)
Q Consensus 95 -~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~--~~a~~~lg~~~~~lg~~~~A 170 (372)
...++..+|+.+|+++++++|+ ..+++++|.++..+|++++|+..|+++++++|++ ..++.++|.++..+|+.++|
T Consensus 84 ~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A 163 (176)
T 2r5s_A 84 LHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAI 163 (176)
T ss_dssp HHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHH
T ss_pred HHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcH
Confidence 3344556689999999999998 9999999999999999999999999999999986 66999999999999999999
Q ss_pred HHHHHHHHc
Q 017383 171 IEDSEFALR 179 (372)
Q Consensus 171 ~~~~~~al~ 179 (372)
+..|+++|.
T Consensus 164 ~~~y~~al~ 172 (176)
T 2r5s_A 164 ASKYRRQLY 172 (176)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 134
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.37 E-value=7.5e-12 Score=97.38 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=93.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|++++..+|.+.. .+..+|.+++..|+|++|+.+|++++..+|. ..++.++|.++..+|++++|+.
T Consensus 16 ~~~~~~~A~~~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 93 (118)
T 1elw_A 16 SVGNIDDALQCYSEAIKLDPHNHV--LYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKR 93 (118)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcccHHHHHHHHHHHHHHCCCcHH--HHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHH
Confidence 678999999999999999998544 4779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
.+++++.++|++..++..++.+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~~ 116 (118)
T 1elw_A 94 TYEEGLKHEANNPQLKEGLQNME 116 (118)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHhh
Confidence 99999999999999999988765
No 135
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=99.37 E-value=3.4e-13 Score=125.77 Aligned_cols=128 Identities=8% Similarity=-0.014 Sum_probs=110.8
Q ss_pred CCCC-CCCCchhhHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHHH
Q 017383 56 PSGN-SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANR 123 (372)
Q Consensus 56 ~~~y-~~g~~~~A~~~~~~al~~~p~~~----~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~l 123 (372)
|..| ..|++++|+..|.+++.+.+... .+..+.++|.+|...|+|++|+.+|++++++.+. +.++.++
T Consensus 43 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~l 122 (307)
T 2ifu_A 43 AVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRA 122 (307)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3344 67999999999999998765432 3557889999999999999999999999998532 6789999
Q ss_pred HHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 124 AMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 124 a~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
|.+|.. |++++|+.+|++|+.+.+.. ..++.++|.++..+|++++|+.+|++++.+.|.+
T Consensus 123 g~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 123 GKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 999999 99999999999999997654 6789999999999999999999999999987643
No 136
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.37 E-value=8.2e-12 Score=98.05 Aligned_cols=104 Identities=26% Similarity=0.382 Sum_probs=97.2
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++...|... ..+..+|.+++..|++++|+.+|++++..+|. ..++.++|.++...|++++|+.
T Consensus 21 ~~~~~~~A~~~~~~~~~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~ 98 (125)
T 1na0_A 21 KQGDYDEAIEYYQKALELDPNNA--EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIE 98 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHCcCcH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHH
Confidence 67899999999999999998854 45779999999999999999999999999998 8999999999999999999999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELG 165 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg 165 (372)
.+++++.++|++..++..+|.++...|
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~~~~~g 125 (125)
T 1na0_A 99 YYQKALELDPNNAEAKQNLGNAKQKQG 125 (125)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHhcc
Confidence 999999999999999999999988765
No 137
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.37 E-value=1e-11 Score=97.84 Aligned_cols=98 Identities=15% Similarity=0.145 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 017383 101 KEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALR 179 (372)
Q Consensus 101 ~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~ 179 (372)
+.|+.+|+++++.+|+ ..+++++|.+|...|++++|+.+|++++.++|++..+|+.+|.++..+|++++|+..|++++.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3578899999999998 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCc--HHHHHHHHHHHHHH
Q 017383 180 LEPQN--QEIKKQLAEVKSLY 198 (372)
Q Consensus 180 l~P~~--~~~~~~l~~a~~~~ 198 (372)
+.|.+ ......+......+
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~l 102 (115)
T 2kat_A 82 AAQSRGDQQVVKELQVFLRRL 102 (115)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH
T ss_pred hccccccHHHHHHHHHHHHHh
Confidence 98853 34444444444333
No 138
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.36 E-value=3.7e-12 Score=117.66 Aligned_cols=124 Identities=15% Similarity=0.084 Sum_probs=106.8
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch----HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYL 128 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~----a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~la~~~~ 128 (372)
..|+|++|+..+++++...+..+. ...++.+|.++...|+|++|+.+|++++.+.+. ..++.++|.+|.
T Consensus 87 ~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 3u3w_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 679999999999999998776655 334556899999999999999999999996543 457999999999
Q ss_pred HhcCHHHHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC
Q 017383 129 KLRRFQEAEDDCTEALNL-------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 183 (372)
Q Consensus 129 ~~g~~~eA~~~~~~Al~l-------~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~ 183 (372)
.+|+|++|+.+|++|+.. .+....+++++|.+|..+|++++|+.++++++.+.+.
T Consensus 167 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 167 ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999953 2334678999999999999999999999999988754
No 139
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.36 E-value=9.3e-12 Score=116.41 Aligned_cols=121 Identities=8% Similarity=-0.088 Sum_probs=67.4
Q ss_pred hhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhh--cHHHHHHHHHHHHccCCC-HHHHHHHHHHH----HHh---cCHHH
Q 017383 66 DPVSHISSSLMNEESTPDATSEKELGNECFKQK--KFKEAIDCYSRSIALSPT-AVAYANRAMAY----LKL---RRFQE 135 (372)
Q Consensus 66 ~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g--~~~~Ai~~y~~al~~~p~-~~~~~~la~~~----~~~---g~~~e 135 (372)
+|+..+.++|.++|.+..+ ++.+|.++...| ++++++.++..+|..+|. ..+|+.|+.++ ..+ +++++
T Consensus 51 ~aL~~t~~~L~~nP~~~ta--Wn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~ 128 (306)
T 3dra_A 51 RALHITELGINELASHYTI--WIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYR 128 (306)
T ss_dssp HHHHHHHHHHHHCTTCHHH--HHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHH
T ss_pred HHHHHHHHHHHHCcHHHHH--HHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHH
Confidence 4555555555555553333 445555555555 555555555555555555 55555555555 444 45555
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHccCCCcHHHH
Q 017383 136 AEDDCTEALNLDDRYIKAYSRRATARKELGKLK--ESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 136 A~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~--~A~~~~~~al~l~P~~~~~~ 188 (372)
++.+|.+++..+|.+..+|+.++.++..+|.++ +++..+.+++.++|.|..++
T Consensus 129 EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW 183 (306)
T 3dra_A 129 EFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAW 183 (306)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHH
Confidence 555555555555555555555555555555555 55555555555555555554
No 140
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.36 E-value=1.9e-12 Score=124.43 Aligned_cols=112 Identities=13% Similarity=0.170 Sum_probs=104.1
Q ss_pred CCCCchhhHHHHHhhhh----------------cCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHH
Q 017383 60 SYSRNYDPVSHISSSLM----------------NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYAN 122 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~----------------~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~ 122 (372)
..|+|++|+..|+++++ .+|. .+.++.++|.+|+..|+|++|+.+|+++++++|+ +.+|++
T Consensus 235 ~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~--~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~ 312 (370)
T 1ihg_A 235 KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV--ALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYR 312 (370)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH--HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 77999999999999998 5554 4566889999999999999999999999999998 999999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 017383 123 RAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 173 (372)
Q Consensus 123 la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~ 173 (372)
+|.+|..+|++++|+.+|++|++++|++..++..++.++..+++++++...
T Consensus 313 lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 313 RAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999888654
No 141
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.36 E-value=4e-12 Score=117.40 Aligned_cols=122 Identities=14% Similarity=0.078 Sum_probs=87.1
Q ss_pred CCCCchhhHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHhhcHHHHHHHHHHHHc---cCCC-----HHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKKFKEAIDCYSRSIA---LSPT-----AVAYANRAMAY 127 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~----~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~---~~p~-----~~~~~~la~~~ 127 (372)
..|++++|+.+|.+++...+... .+.+++.+|.+|+..|+|++|+.+|++++. ..|+ ..+++++|.+|
T Consensus 127 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y 206 (293)
T 2qfc_A 127 KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKAL 206 (293)
T ss_dssp TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHH
Confidence 55778888888888876543321 244677788888888888888888888873 3333 25777888888
Q ss_pred HHhcCHHHHHHHHHHHHhcCCC------CHHHHHHHHHHHHHcCCHHHH-HHHHHHHHccC
Q 017383 128 LKLRRFQEAEDDCTEALNLDDR------YIKAYSRRATARKELGKLKES-IEDSEFALRLE 181 (372)
Q Consensus 128 ~~~g~~~eA~~~~~~Al~l~p~------~~~a~~~lg~~~~~lg~~~~A-~~~~~~al~l~ 181 (372)
..+|+|++|+.++++++.+.+. ...+++++|.++..+|++++| ..+|++++.+.
T Consensus 207 ~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 207 YLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 8888888888888888776532 266777888888888888888 66677777553
No 142
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.36 E-value=1.4e-12 Score=120.55 Aligned_cols=151 Identities=12% Similarity=0.013 Sum_probs=126.0
Q ss_pred hHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHH
Q 017383 18 DLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK 96 (372)
Q Consensus 18 ~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~ 96 (372)
...++++++......+...+....- ...+|..| ..|++++|+..|++++..+|+ ........+..+..
T Consensus 129 ~~g~~~~A~~~~~~al~~~P~~~~a---------~~~la~~~~~~g~~~~A~~~l~~~~~~~p~--~~~~~~~~~~~l~~ 197 (287)
T 3qou_A 129 QESNYTDALPLLXDAWQLSNQNGEI---------GLLLAETLIALNRSEDAEAVLXTIPLQDQD--TRYQGLVAQIELLX 197 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHTTSCHHH---------HHHHHHHHHHTTCHHHHHHHHTTSCGGGCS--HHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHhCCcchhH---------HHHHHHHHHHCCCHHHHHHHHHhCchhhcc--hHHHHHHHHHHHHh
Confidence 3456777777777766655511110 01122234 789999999999999999996 33445677888999
Q ss_pred hhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCCHHHHHHH
Q 017383 97 QKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAYSRRATARKELGKLKESIED 173 (372)
Q Consensus 97 ~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~--~~a~~~lg~~~~~lg~~~~A~~~ 173 (372)
.+++++|+..|++++..+|+ ..+++++|.+|...|++++|+..|.++++++|++ ..++.++|.++..+|+.++|...
T Consensus 198 ~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~ 277 (287)
T 3qou_A 198 QAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASX 277 (287)
T ss_dssp HHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHH
T ss_pred hcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999 89999999999999999999999
Q ss_pred HHHHHc
Q 017383 174 SEFALR 179 (372)
Q Consensus 174 ~~~al~ 179 (372)
|++++.
T Consensus 278 ~r~al~ 283 (287)
T 3qou_A 278 YRRQLY 283 (287)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 143
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.35 E-value=1.2e-11 Score=125.47 Aligned_cols=129 Identities=10% Similarity=0.075 Sum_probs=118.7
Q ss_pred chhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhc----------HHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhc-
Q 017383 64 NYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK----------FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR- 131 (372)
Q Consensus 64 ~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~----------~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g- 131 (372)
.++|+..+.+++..+|++..+ |+.+|.++...|+ |++|+.+|+++++.+|+ ..+|+.|+.++..+|
T Consensus 45 ~eeal~~~~~~l~~nP~~~ta--W~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~ 122 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATL--WNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPE 122 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSS
T ss_pred CHHHHHHHHHHHHHCchhHHH--HHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccc
Confidence 357899999999999996655 7788999999998 99999999999999999 999999999999999
Q ss_pred -CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 132 -RFQEAEDDCTEALNLDDRYIKAYSRRATARKELG-KLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 132 -~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg-~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
++++|+.+|.++++++|.+..+|+.+|.++..+| .++++++++.++++++|.|..+|.....+
T Consensus 123 ~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~saW~~r~~l 187 (567)
T 1dce_A 123 PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL 187 (567)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCccHHHHHHHH
Confidence 7799999999999999999999999999999999 99999999999999999999886443333
No 144
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.35 E-value=7.7e-12 Score=115.03 Aligned_cols=127 Identities=15% Similarity=0.093 Sum_probs=112.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC---HHHHHHHHHHHHHhcCHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT---AVAYANRAMAYLKLRRFQEA 136 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~---~~~~~~la~~~~~~g~~~eA 136 (372)
..|+|++|...|...+...|.. . ..+.+|.+++..|+|++|+.+|+.++...+. ..+++++|.++..+|++++|
T Consensus 114 ~~g~y~eA~~~l~~~~~~~p~~--~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eA 190 (282)
T 4f3v_A 114 AQGNYADAMEALEAAPVAGSEH--L-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEA 190 (282)
T ss_dssp HHTCHHHHHHHHTSSCCTTCHH--H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HCCCHHHHHHHHHHHHhcCCch--H-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHH
Confidence 5799999999999999998874 3 6789999999999999999999988876432 56899999999999999999
Q ss_pred HHHHHHHHhcC--CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHH
Q 017383 137 EDDCTEALNLD--DR-YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQ 190 (372)
Q Consensus 137 ~~~~~~Al~l~--p~-~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~ 190 (372)
+.+|++++... |. ...+++++|.++..+|+.++|...|++++..+|+ ..+...
T Consensus 191 l~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~-~~~~~a 246 (282)
T 4f3v_A 191 ERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE-PKVAAA 246 (282)
T ss_dssp HHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC-HHHHHH
T ss_pred HHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-HHHHHH
Confidence 99999999655 66 6789999999999999999999999999999998 665543
No 145
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=7.8e-12 Score=101.85 Aligned_cols=104 Identities=14% Similarity=0.092 Sum_probs=95.1
Q ss_pred CCCCchhhHHHHHhhhhcCCCCc-hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTP-DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~-~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~ 137 (372)
..|++++|+..|++++..+|... ....+..+|.+|+..|+|++|+.+|++++.++|. ..+++++|.++..+|++++|+
T Consensus 40 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~ 119 (148)
T 2dba_A 40 KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAV 119 (148)
T ss_dssp TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHH
Confidence 78999999999999999998741 1556889999999999999999999999999998 999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHH
Q 017383 138 DDCTEALNLDDRYIKAYSRRATARKE 163 (372)
Q Consensus 138 ~~~~~Al~l~p~~~~a~~~lg~~~~~ 163 (372)
.+|++++.++|++..++..++.+...
T Consensus 120 ~~~~~al~~~p~~~~~~~~l~~~~~~ 145 (148)
T 2dba_A 120 LDLQRCVSLEPKNKVFQEALRNISGP 145 (148)
T ss_dssp HHHHHHHHHCSSCHHHHHHHHHHHCS
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHhh
Confidence 99999999999999999888876543
No 146
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.34 E-value=3.5e-12 Score=116.79 Aligned_cols=119 Identities=26% Similarity=0.258 Sum_probs=107.9
Q ss_pred CCCCchhhHHHHHhhhhc--------CCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC--------CC-HHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMN--------EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS--------PT-AVAYAN 122 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~--------~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~--------p~-~~~~~~ 122 (372)
..|++++|+..|++++.+ .|. .+.++..+|.+|+..|++++|+.+|.+++.+. |. ..++.+
T Consensus 39 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~--~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 116 (311)
T 3nf1_A 39 SQGRYEVAVPLCKQALEDLEKTSGHDHPD--VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNN 116 (311)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHCSSSHH--HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHHcCCCCHH--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 779999999999999985 333 56668899999999999999999999999873 33 888999
Q ss_pred HHHHHHHhcCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 123 RAMAYLKLRRFQEAEDDCTEALNLD--------DRYIKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 123 la~~~~~~g~~~eA~~~~~~Al~l~--------p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
+|.+|..+|++++|+..+++++.+. |....++..+|.++...|++++|+.+|++++.+
T Consensus 117 l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 117 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999884 667888999999999999999999999999998
No 147
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.34 E-value=2.2e-11 Score=113.82 Aligned_cols=138 Identities=11% Similarity=0.040 Sum_probs=126.9
Q ss_pred CCC--CchhhHHHHHhhhhcCCCCchHHHHHHHHHHH----HHh---hcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHH
Q 017383 60 SYS--RNYDPVSHISSSLMNEESTPDATSEKELGNEC----FKQ---KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLK 129 (372)
Q Consensus 60 ~~g--~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~----~~~---g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~ 129 (372)
.+| ++++++.++..++..+|++..+ |+.++.++ ... +++++++.++.++++.+|. ..+|..++.++..
T Consensus 79 ~l~~~~~~eeL~~~~~~L~~nPk~y~a--W~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~ 156 (306)
T 3dra_A 79 NLPNRNLYDELDWCEEIALDNEKNYQI--WNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDT 156 (306)
T ss_dssp TCTTSCHHHHHHHHHHHHHHCTTCCHH--HHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HcccccHHHHHHHHHHHHHHCcccHHH--HHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 567 9999999999999999997777 55778888 666 7999999999999999998 9999999999999
Q ss_pred hcCHH--HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHH
Q 017383 130 LRRFQ--EAEDDCTEALNLDDRYIKAYSRRATARKELGK------LKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (372)
Q Consensus 130 ~g~~~--eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~------~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (372)
+|.++ +++.++.+++..+|.+..+|+.++.++..+|+ ++++++++.+++.++|+|..++..+.-+....+
T Consensus 157 l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~ 234 (306)
T 3dra_A 157 FDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFD 234 (306)
T ss_dssp TTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTT
T ss_pred hcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCccHHHHHHHHHHhcC
Confidence 99999 99999999999999999999999999999998 999999999999999999999988877665443
No 148
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.34 E-value=3.5e-12 Score=103.09 Aligned_cols=104 Identities=13% Similarity=0.026 Sum_probs=93.2
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~ 138 (372)
..|++++|+..|.+++..+|.+.. ++..+|.+++..|+|++|+.+|++++.++|+ ..+++++|.++..+|++++|+.
T Consensus 21 ~~~~~~~A~~~~~~al~~~~~~~~--~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~ 98 (137)
T 3q49_B 21 VGRKYPEAAACYGRAITRNPLVAV--YYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIA 98 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhCcHHHHHHHHHHHHhhCcCcHH--HHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHH
Confidence 779999999999999999998554 4779999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHHHhcCCC-----CHHHHHHHHHHHHHcC
Q 017383 139 DCTEALNLDDR-----YIKAYSRRATARKELG 165 (372)
Q Consensus 139 ~~~~Al~l~p~-----~~~a~~~lg~~~~~lg 165 (372)
+|++++.++|+ +..+...+..+.....
T Consensus 99 ~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~ 130 (137)
T 3q49_B 99 NLQRAYSLAKEQRLNFGDDIPSALRIAKKKRW 130 (137)
T ss_dssp HHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHChhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988 6666666666555443
No 149
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=99.34 E-value=5.9e-12 Score=120.41 Aligned_cols=135 Identities=10% Similarity=0.028 Sum_probs=114.0
Q ss_pred CCCCchhhHHHHHhhhhcCCCC----chHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC--------HHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEEST----PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAYANRAMAY 127 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~----~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~--------~~~~~~la~~~ 127 (372)
..|++++|+.+|.+++.+.+.. ..+.++..+|.+|+..|+++.|+.+|.+++++.+. +.++.++|.+|
T Consensus 113 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y 192 (378)
T 3q15_A 113 DQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNY 192 (378)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 6799999999999999875322 24667899999999999999999999999987432 67889999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-----cCCCcHHHHHHHHHH
Q 017383 128 LKLRRFQEAEDDCTEALNLDD------RYIKAYSRRATARKELGKLKESIEDSEFALR-----LEPQNQEIKKQLAEV 194 (372)
Q Consensus 128 ~~~g~~~eA~~~~~~Al~l~p------~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~-----l~P~~~~~~~~l~~a 194 (372)
..+|++++|+..|.+|+.+.+ ....+++++|.++..+|++++|+.+|++++. .+|....+...++.+
T Consensus 193 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~ 270 (378)
T 3q15_A 193 DDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWT 270 (378)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHH
Confidence 999999999999999999743 2357899999999999999999999999999 667665555444443
No 150
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.33 E-value=4.9e-12 Score=128.27 Aligned_cols=129 Identities=9% Similarity=-0.003 Sum_probs=119.8
Q ss_pred chhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhh--cHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhc-CHHHHHHH
Q 017383 64 NYDPVSHISSSLMNEESTPDATSEKELGNECFKQK--KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR-RFQEAEDD 139 (372)
Q Consensus 64 ~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g--~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g-~~~eA~~~ 139 (372)
+++++.++++++..+|++..+ |..+|.++...| +|++|+.+++++++++|. ..+|..++.++..+| .+++++++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~a--W~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~ 166 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGT--WHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAF 166 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHH
Confidence 899999999999999996666 668899999999 779999999999999998 999999999999999 99999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 140 CTEALNLDDRYIKAYSRRATARKEL--------------GKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 140 ~~~Al~l~p~~~~a~~~lg~~~~~l--------------g~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
+.++|+.+|.+..+|+.+|.++..+ +.+++|++++.+|+.++|++..+|..+.-+
T Consensus 167 ~~~~I~~~p~n~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~saW~y~~~l 235 (567)
T 1dce_A 167 TDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWL 235 (567)
T ss_dssp HHTTTTTTCCCHHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHH
T ss_pred HHHHHHHCCCCccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCccHHHHHHHH
Confidence 9999999999999999999999986 668999999999999999999988766544
No 151
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.32 E-value=9.6e-11 Score=110.42 Aligned_cols=134 Identities=10% Similarity=0.050 Sum_probs=119.9
Q ss_pred CCch-hhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhc----------HHHHHHHHHHHHccCCC-HHHHHHHHHHHHH
Q 017383 62 SRNY-DPVSHISSSLMNEESTPDATSEKELGNECFKQKK----------FKEAIDCYSRSIALSPT-AVAYANRAMAYLK 129 (372)
Q Consensus 62 g~~~-~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~----------~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~ 129 (372)
|++. +|+..+..+|.++|.+..+ |+.++.++...|. +++++.+++.++..+|. ..+|+.++.++..
T Consensus 43 ~e~s~eaL~~t~~~L~~nP~~yta--Wn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~ 120 (331)
T 3dss_A 43 GELDESVLELTSQILGANPDFATL--WNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSR 120 (331)
T ss_dssp TCCSHHHHHHHHHHHTTCTTCHHH--HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCchhHHH--HHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhc
Confidence 4444 7999999999999996666 6678888877776 79999999999999998 9999999999999
Q ss_pred hcC--HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHccCCCcHHHHHHHHHHHHH
Q 017383 130 LRR--FQEAEDDCTEALNLDDRYIKAYSRRATARKELGK-LKESIEDSEFALRLEPQNQEIKKQLAEVKSL 197 (372)
Q Consensus 130 ~g~--~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~-~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~ 197 (372)
+|+ +++++.+|.+++.++|.+..+|+.++.+...+|. +++++.++.+++..+|.|..++.....+...
T Consensus 121 l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~SAW~~R~~ll~~ 191 (331)
T 3dss_A 121 LPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQ 191 (331)
T ss_dssp CSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 994 9999999999999999999999999999999999 6999999999999999999997666555443
No 152
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.32 E-value=2.8e-12 Score=108.93 Aligned_cols=103 Identities=17% Similarity=0.143 Sum_probs=90.4
Q ss_pred HHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHcCCH--
Q 017383 92 NECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA-RKELGKL-- 167 (372)
Q Consensus 92 ~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~-~~~lg~~-- 167 (372)
..+...|+|++|+.+|++++..+|. ..++..+|.+|...|++++|+.+|++++.++|+++.+++.+|.+ +...|++
T Consensus 18 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~ 97 (177)
T 2e2e_A 18 HQFASQQNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMT 97 (177)
T ss_dssp CCCC-----CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCC
T ss_pred hhhhhccCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcch
Confidence 3356789999999999999999998 99999999999999999999999999999999999999999999 8899999
Q ss_pred HHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 168 KESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 168 ~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
++|+..|++++.++|++..++..++.+
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~ 124 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASD 124 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 999999999999999998876554443
No 153
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.31 E-value=3e-11 Score=111.53 Aligned_cols=123 Identities=15% Similarity=0.070 Sum_probs=106.2
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch----HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYL 128 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~----a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~la~~~~ 128 (372)
..|+|++|+..+.+++...+.... ...++.+|..+...|+|++|+.+|.+++.+.+. ..+++++|.+|.
T Consensus 87 ~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 166 (293)
T 2qfc_A 87 KQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYA 166 (293)
T ss_dssp HTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 678999999999999998876432 234567899999999999999999999986532 568999999999
Q ss_pred HhcCHHHHHHHHHHHH---hcCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 017383 129 KLRRFQEAEDDCTEAL---NLDDRY----IKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 129 ~~g~~~eA~~~~~~Al---~l~p~~----~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P 182 (372)
.+|+|++|+.+|++|+ ...|++ ..+++++|.+|..+|++++|+.+|++++.+.+
T Consensus 167 ~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 167 ENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999 445553 36899999999999999999999999998864
No 154
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.31 E-value=2.7e-11 Score=96.72 Aligned_cols=107 Identities=12% Similarity=-0.005 Sum_probs=93.3
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch-HHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC----HHHHHHHHHHHHHhcCHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQ 134 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~-a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~~la~~~~~~g~~~ 134 (372)
..|++++|+..|.+++..+|.+.. ..+++.+|.+++..|+|++|+.+|++++..+|+ ..+++++|.+|..+|+++
T Consensus 14 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~ 93 (129)
T 2xev_A 14 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNT 93 (129)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHH
T ss_pred HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHH
Confidence 679999999999999999998652 245779999999999999999999999999987 678999999999999999
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 017383 135 EAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (372)
Q Consensus 135 eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~ 166 (372)
+|+..|++++..+|++..+...+..+....++
T Consensus 94 ~A~~~~~~~~~~~p~~~~~~~a~~~l~~l~~~ 125 (129)
T 2xev_A 94 EAQQTLQQVATQYPGSDAARVAQERLQSIRLG 125 (129)
T ss_dssp HHHHHHHHHHHHSTTSHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHCCCChHHHHHHHHHHHHHhh
Confidence 99999999999999998887766665554443
No 155
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.30 E-value=8.3e-11 Score=106.76 Aligned_cols=123 Identities=14% Similarity=0.102 Sum_probs=105.3
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHH----hhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHH----hc
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK----LR 131 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~----~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~----~g 131 (372)
..|++++|+.+|+++++ +.+ ..+++.+|.+|.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .+
T Consensus 18 ~~~~~~~A~~~~~~a~~--~~~--~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~g~~~~~ 92 (273)
T 1ouv_A 18 KEKDFTQAKKYFEKACD--LKE--NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-YSNGCHLLGNLYYSGQGVSQ 92 (273)
T ss_dssp HTTCHHHHHHHHHHHHH--TTC--HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCC
T ss_pred hCCCHHHHHHHHHHHHH--CCC--HHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHhCCCCccc
Confidence 56899999999999998 443 3447799999999 999999999999999885 58889999999999 99
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCCcHHHHHHH
Q 017383 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEPQNQEIKKQL 191 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~----lg~~~~A~~~~~~al~l~P~~~~~~~~l 191 (372)
++++|+.+|++++.++ ++.+++++|.++.. .|++++|+.+|++++.+++ ..++..+
T Consensus 93 ~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~--~~a~~~l 152 (273)
T 1ouv_A 93 NTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND--GDGCTIL 152 (273)
T ss_dssp CHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC--HHHHHHH
T ss_pred CHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc--HHHHHHH
Confidence 9999999999999874 88999999999999 9999999999999999873 4444333
No 156
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.30 E-value=8.6e-12 Score=102.30 Aligned_cols=124 Identities=18% Similarity=0.196 Sum_probs=102.0
Q ss_pred CCCCchhhHHHHHhhhhcCCCCc----hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTP----DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYL 128 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~----~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~la~~~~ 128 (372)
..|++++|+..+.+++...+... .+.++..+|.+++..|+|++|+.+|++++.+.+. ..++.++|.++.
T Consensus 21 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~ 100 (164)
T 3ro3_A 21 LLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT 100 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 67899999999999998754322 2346788999999999999999999999987532 667889999999
Q ss_pred HhcCHHHHHHHHHHHHhcCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC
Q 017383 129 KLRRFQEAEDDCTEALNLDD------RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 183 (372)
Q Consensus 129 ~~g~~~eA~~~~~~Al~l~p------~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~ 183 (372)
.+|++++|+..+++++.+.+ ....++..+|.++..+|++++|+..+++++.+...
T Consensus 101 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 101 LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999988742 22667888999999999999999999999877543
No 157
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=99.29 E-value=6.8e-11 Score=111.43 Aligned_cols=124 Identities=10% Similarity=0.011 Sum_probs=115.6
Q ss_pred chhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhh--cHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcC-HHHHHHH
Q 017383 64 NYDPVSHISSSLMNEESTPDATSEKELGNECFKQK--KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRR-FQEAEDD 139 (372)
Q Consensus 64 ~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g--~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~-~~eA~~~ 139 (372)
+++++.++..++..+|.+..+ |..++.++...| .|++++.++.++++.+|. ..+|..++.+...+|. +++++.+
T Consensus 90 l~~EL~~~~~~L~~~PKny~a--W~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~ 167 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGT--WHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAF 167 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHH--HHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 688999999999999996666 668899999988 499999999999999998 9999999999999999 6999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHccCCCcHHHHH
Q 017383 140 CTEALNLDDRYIKAYSRRATARKEL--------------GKLKESIEDSEFALRLEPQNQEIKK 189 (372)
Q Consensus 140 ~~~Al~l~p~~~~a~~~lg~~~~~l--------------g~~~~A~~~~~~al~l~P~~~~~~~ 189 (372)
+.+++..+|.+..+|+.++.++..+ +.++++++++.+++.++|+|..+|.
T Consensus 168 ~~~~I~~~p~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~SaW~ 231 (331)
T 3dss_A 168 TDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWF 231 (331)
T ss_dssp HHHHHHHCSCCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 9999999999999999999999988 5699999999999999999999874
No 158
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.29 E-value=1.4e-11 Score=106.06 Aligned_cols=121 Identities=14% Similarity=0.018 Sum_probs=98.8
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC------CC-HHHHHHHHHHHHHhc
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS------PT-AVAYANRAMAYLKLR 131 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~------p~-~~~~~~la~~~~~~g 131 (372)
+..|++++|...++.... +|. ..+.++..+|.+++..|+|++|+.+|.+++.+. +. ..++.++|.+|..+|
T Consensus 3 ~~~g~~~~A~~~~~~~~~-~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 80 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLA-HPA-TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG 80 (203)
T ss_dssp ----CHHHHHHHHHHHHT-STT-THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred cccccHHHHHHHHHHhcC-ChH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC
Confidence 467899999995444433 432 356778899999999999999999999999942 22 788999999999999
Q ss_pred CHHHHHHHHHHHHhc---CC----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC
Q 017383 132 RFQEAEDDCTEALNL---DD----RYIKAYSRRATARKELGKLKESIEDSEFALRLE 181 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l---~p----~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~ 181 (372)
++++|+..+++++.+ .+ ....+++++|.++..+|++++|+..|++++.+.
T Consensus 81 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 81 NWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999998 33 336779999999999999999999999999764
No 159
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.29 E-value=2.3e-11 Score=95.85 Aligned_cols=99 Identities=12% Similarity=0.103 Sum_probs=85.6
Q ss_pred hhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017383 65 YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEA 143 (372)
Q Consensus 65 ~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~A 143 (372)
..|+..|++++..+|.+.. .++.+|.+|+..|+|++|+.+|++++.++|. ..+|+++|.+|..+|++++|+..|+++
T Consensus 2 ~~a~~~~~~al~~~p~~~~--~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNML--LRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHH--HHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 5789999999999998554 5779999999999999999999999999998 999999999999999999999999999
Q ss_pred HhcCCCC--HHHHHHHHHHHHHcC
Q 017383 144 LNLDDRY--IKAYSRRATARKELG 165 (372)
Q Consensus 144 l~l~p~~--~~a~~~lg~~~~~lg 165 (372)
+.++|.. ..+...+...+..+|
T Consensus 80 l~~~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 80 LAAAQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHhccccccHHHHHHHHHHHHHhc
Confidence 9998853 455555555554444
No 160
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.28 E-value=8.1e-12 Score=119.73 Aligned_cols=122 Identities=19% Similarity=0.191 Sum_probs=109.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch--HHHHHHHHHHHHHhhcHHHHHHHHHHHHcc------CCC-HHHHHHHHHHHHHh
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD--ATSEKELGNECFKQKKFKEAIDCYSRSIAL------SPT-AVAYANRAMAYLKL 130 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~--a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~------~p~-~~~~~~la~~~~~~ 130 (372)
..|++++|+..|++++...|.+.. +.++..+|.+|+..|+|++|+.+|++++.+ .|. ..++.++|.+|..+
T Consensus 60 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 139 (411)
T 4a1s_A 60 NAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVM 139 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHC
Confidence 779999999999999999988653 356889999999999999999999999987 344 88899999999999
Q ss_pred cCHHHHHHHHHHHHhc------CCCCHHHHHHHHHHHHHcCC-----------------HHHHHHHHHHHHccC
Q 017383 131 RRFQEAEDDCTEALNL------DDRYIKAYSRRATARKELGK-----------------LKESIEDSEFALRLE 181 (372)
Q Consensus 131 g~~~eA~~~~~~Al~l------~p~~~~a~~~lg~~~~~lg~-----------------~~~A~~~~~~al~l~ 181 (372)
|++++|+.+|++++.+ .+....++.++|.++..+|+ +++|+.+|++++.+.
T Consensus 140 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~ 213 (411)
T 4a1s_A 140 GRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLM 213 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 56678899999999999999 999999999998875
No 161
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.28 E-value=4.7e-11 Score=89.12 Aligned_cols=83 Identities=33% Similarity=0.482 Sum_probs=67.7
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
.+..++.+|.+++..|+|++|+.+|++++.++|. ..++.++|.++..+|++++|+.+|++++.++|++..++.++|.++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~ 87 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3455678888888888888888888888888887 778888888888888888888888888888888888888888887
Q ss_pred HHcC
Q 017383 162 KELG 165 (372)
Q Consensus 162 ~~lg 165 (372)
..+|
T Consensus 88 ~~~g 91 (91)
T 1na3_A 88 QKQG 91 (91)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 7654
No 162
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.26 E-value=1.9e-10 Score=104.32 Aligned_cols=136 Identities=18% Similarity=0.150 Sum_probs=107.8
Q ss_pred CCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHH----hhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHH----hcC
Q 017383 61 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK----LRR 132 (372)
Q Consensus 61 ~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~----~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~----~g~ 132 (372)
.+++++|+.+|+++++.+ ...+++.+|.+|.. .+++++|+.+|+++++.+ ++.+++++|.+|.. .++
T Consensus 55 ~~~~~~A~~~~~~a~~~~----~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~~~~~~ 129 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN----YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK-YAEGCASLGGIYHDGKVVTRD 129 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHCSSSCCC
T ss_pred CCCHHHHHHHHHHHHHCC----CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC-CccHHHHHHHHHHcCCCcccC
Confidence 788899999999998876 34457788999988 999999999999998874 47888899999988 899
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCCcHHHH--------------HHHHHH
Q 017383 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEPQNQEIK--------------KQLAEV 194 (372)
Q Consensus 133 ~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~----lg~~~~A~~~~~~al~l~P~~~~~~--------------~~l~~a 194 (372)
+++|+.+|++++.++ +..+++++|.++.. .+++++|+.+|++++.+++ ..++ +.+.+|
T Consensus 130 ~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~--~~a~~~lg~~~~~g~~~~~~~~~A 205 (273)
T 1ouv_A 130 FKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD--SPGCFNAGNMYHHGEGATKNFKEA 205 (273)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHTCSSCCCHHHH
T ss_pred HHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC--HHHHHHHHHHHHcCCCCCccHHHH
Confidence 999999999998876 67888889998888 8899999999999888753 3332 234455
Q ss_pred HHHHHHHHHhh
Q 017383 195 KSLYEKEVFQK 205 (372)
Q Consensus 195 ~~~~~~~~~~~ 205 (372)
...+++++...
T Consensus 206 ~~~~~~a~~~~ 216 (273)
T 1ouv_A 206 LARYSKACELE 216 (273)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhCC
Confidence 55666655544
No 163
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.26 E-value=2.2e-11 Score=104.78 Aligned_cols=123 Identities=12% Similarity=0.098 Sum_probs=105.0
Q ss_pred CCCCchhhHHHHHhhhhcCCC----CchHHHHHHHHHHHHHhhcHHHHHHHHHHHHcc------CC-C-HHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEES----TPDATSEKELGNECFKQKKFKEAIDCYSRSIAL------SP-T-AVAYANRAMAY 127 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~----~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~------~p-~-~~~~~~la~~~ 127 (372)
..|++++|+.+|.+++..... ...+.++..+|.++...|++++|+.+|.+++.+ ++ . ..++.++|.++
T Consensus 38 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~ 117 (203)
T 3gw4_A 38 FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVA 117 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHH
Confidence 779999999999999983321 125567889999999999999999999999998 33 2 67899999999
Q ss_pred HHhcCHHHHHHHHHHHHhcCCC--C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 017383 128 LKLRRFQEAEDDCTEALNLDDR--Y----IKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 128 ~~~g~~~eA~~~~~~Al~l~p~--~----~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P 182 (372)
..+|++++|+..+++++.+.+. + ..++..+|.++..+|++++|...|++++.+..
T Consensus 118 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 118 LHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999976422 1 44578999999999999999999999998754
No 164
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.26 E-value=9.3e-11 Score=103.29 Aligned_cols=112 Identities=8% Similarity=-0.062 Sum_probs=52.8
Q ss_pred CCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhh----cHHHHHHHHHHHHccCCC-HHHHHHHHHHHHH----hcC
Q 017383 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK----KFKEAIDCYSRSIALSPT-AVAYANRAMAYLK----LRR 132 (372)
Q Consensus 62 g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g----~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~----~g~ 132 (372)
+++++|+.+|+++++.. .+.+++.+|.+|.. + ++++|+.+|+++++ +. +.+++++|.+|.. .++
T Consensus 32 ~~~~~A~~~~~~a~~~g----~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d 104 (212)
T 3rjv_A 32 GDYQKAEYWAQKAAAQG----DGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATD 104 (212)
T ss_dssp TCHHHHHHHHHHHHHTT----CHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCC
T ss_pred CCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccC
Confidence 44455555555554432 22223344544444 3 45555555555432 22 4444455555544 445
Q ss_pred HHHHHHHHHHHHhcCC--CCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHcc
Q 017383 133 FQEAEDDCTEALNLDD--RYIKAYSRRATARKE----LGKLKESIEDSEFALRL 180 (372)
Q Consensus 133 ~~eA~~~~~~Al~l~p--~~~~a~~~lg~~~~~----lg~~~~A~~~~~~al~l 180 (372)
+++|+.+|++|+..++ .++.+++++|.+|.. .+++++|+.+|++++.+
T Consensus 105 ~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 105 VAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 5555555555554444 234455555555544 44455555555555444
No 165
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.25 E-value=4.1e-11 Score=105.60 Aligned_cols=109 Identities=14% Similarity=0.053 Sum_probs=62.6
Q ss_pred hhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhc----CHHHHHHHHH
Q 017383 66 DPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLR----RFQEAEDDCT 141 (372)
Q Consensus 66 ~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g----~~~eA~~~~~ 141 (372)
+|+..|+++.+.. .+.+++.+|.+|+..+++++|+.+|+++++.. ++.+++++|.+|.. + ++++|+.+|+
T Consensus 4 eA~~~~~~aa~~g----~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g-~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 4 EPGSQYQQQAEAG----DRRAQYYLADTWVSSGDYQKAEYWAQKAAAQG-DGDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp CTTHHHHHHHHTT----CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT-CHHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred hHHHHHHHHHHCC----CHHHHHHHHHHHhcCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 3555555555542 23334466666666666666666666665431 25556666666655 4 5666666666
Q ss_pred HHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCC
Q 017383 142 EALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 142 ~Al~l~p~~~~a~~~lg~~~~~----lg~~~~A~~~~~~al~l~P 182 (372)
+|+. +.++.+++++|.+|.. .+++++|+.+|++++...|
T Consensus 78 ~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 120 (212)
T 3rjv_A 78 KAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSE 120 (212)
T ss_dssp HHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTT
T ss_pred HHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCC
Confidence 6643 3456666666666655 5566666666666666655
No 166
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.25 E-value=7e-11 Score=111.95 Aligned_cols=122 Identities=6% Similarity=-0.040 Sum_probs=85.1
Q ss_pred hhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhh-cHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHh-c-CHHHHHHHH
Q 017383 65 YDPVSHISSSLMNEESTPDATSEKELGNECFKQK-KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL-R-RFQEAEDDC 140 (372)
Q Consensus 65 ~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g-~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~-g-~~~eA~~~~ 140 (372)
++|+..+.++|.++|.+..+ ++.+|.++...| .+++++.+++.+|..+|+ ..+|+.|+.++..+ + ++++++.++
T Consensus 71 e~AL~lt~~~L~~nP~~yta--Wn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~ 148 (349)
T 3q7a_A 71 ERALELTEIIVRMNPAHYTV--WQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYI 148 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHH--HHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCchhHHH--HHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHH
Confidence 46677777777777774444 556677776666 477777777777777776 77777777777766 6 667777777
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHccCCCcHHHH
Q 017383 141 TEALNLDDRYIKAYSRRATARKELGKLK--------ESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 141 ~~Al~l~p~~~~a~~~lg~~~~~lg~~~--------~A~~~~~~al~l~P~~~~~~ 188 (372)
.+++.++|.+..+|+.++.+...+|.++ ++++++.+++.++|.|..++
T Consensus 149 ~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~SAW 204 (349)
T 3q7a_A 149 HGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNNSAW 204 (349)
T ss_dssp HHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCHHHH
Confidence 7777777777777777777777776666 77777777777777776664
No 167
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.25 E-value=1.5e-11 Score=116.89 Aligned_cols=121 Identities=20% Similarity=0.225 Sum_probs=103.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch--HHHHHHHHHHHHHhhcHHHHHHHHHHHHccC------CC-HHHHHHHHHHHHHh
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD--ATSEKELGNECFKQKKFKEAIDCYSRSIALS------PT-AVAYANRAMAYLKL 130 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~--a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~------p~-~~~~~~la~~~~~~ 130 (372)
..|++++|+.+|++++...|.++. +.++..+|.+++..|+|++|+.+|++++.+. |. ..++.++|.+|..+
T Consensus 21 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 100 (406)
T 3sf4_A 21 KSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVL 100 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHc
Confidence 678999999999999999887654 4567889999999999999999999998873 22 77889999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHcc
Q 017383 131 RRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGK--------------------LKESIEDSEFALRL 180 (372)
Q Consensus 131 g~~~eA~~~~~~Al~l~p~~------~~a~~~lg~~~~~lg~--------------------~~~A~~~~~~al~l 180 (372)
|++++|+.++.+++.+.+.. ..++..+|.++...|+ +++|+..|++++.+
T Consensus 101 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~ 176 (406)
T 3sf4_A 101 GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSL 176 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999886653 5588899999999999 99999999998876
No 168
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.24 E-value=1e-11 Score=94.96 Aligned_cols=87 Identities=17% Similarity=0.171 Sum_probs=43.8
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccCCC-HH-HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-AV-AYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~-~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~ 166 (372)
.+|..++..|+|++|+.+|+++++.+|+ .. +++++|.+|..+|++++|+.+|++++.++|++..++++ +.
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~ 76 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KM 76 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HH
Confidence 3455555555555555555555555554 44 55555555555555555555555555555555444432 33
Q ss_pred HHHHHHHHHHHHccCCC
Q 017383 167 LKESIEDSEFALRLEPQ 183 (372)
Q Consensus 167 ~~~A~~~~~~al~l~P~ 183 (372)
+.+|+..|++++.++|+
T Consensus 77 ~~~a~~~~~~~~~~~p~ 93 (99)
T 2kc7_A 77 VMDILNFYNKDMYNQLE 93 (99)
T ss_dssp HHHHHHHHCCTTHHHHC
T ss_pred HHHHHHHHHHHhccCcc
Confidence 44444444444444443
No 169
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.24 E-value=4.1e-12 Score=121.82 Aligned_cols=165 Identities=18% Similarity=0.148 Sum_probs=124.7
Q ss_pred HHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCC----CCchHHHHH
Q 017383 14 GFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEE----STPDATSEK 88 (372)
Q Consensus 14 ~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p----~~~~a~~~~ 88 (372)
..+-...+|++++....+.+...+....... .....+|..| ..|++++|+.+|++++.... ....+.++.
T Consensus 56 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-----~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 130 (411)
T 4a1s_A 56 ERLCNAGDCRAGVAFFQAAIQAGTEDLRTLS-----AIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSG 130 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHH-----HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHhcccChhHHH-----HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHH
Confidence 3344556788888877777765431110000 0011223334 67999999999999988621 112456688
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccC------CC-HHHHHHHHHHHHHhcC-----------------HHHHHHHHHHHH
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALS------PT-AVAYANRAMAYLKLRR-----------------FQEAEDDCTEAL 144 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~------p~-~~~~~~la~~~~~~g~-----------------~~eA~~~~~~Al 144 (372)
.+|.+|+..|++++|+.+|.+++.+. +. ..++.++|.+|..+|+ +++|+.++.+++
T Consensus 131 ~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al 210 (411)
T 4a1s_A 131 NLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENL 210 (411)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999983 33 7789999999999999 999999999998
Q ss_pred hcC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC
Q 017383 145 NLD------DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 183 (372)
Q Consensus 145 ~l~------p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~ 183 (372)
.+. +....++..+|.++..+|++++|+.+|++++.+.+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 255 (411)
T 4a1s_A 211 KLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE 255 (411)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh
Confidence 874 344678999999999999999999999999998764
No 170
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.23 E-value=1.9e-11 Score=112.39 Aligned_cols=122 Identities=20% Similarity=0.219 Sum_probs=107.4
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch--HHHHHHHHHHHHHhhcHHHHHHHHHHHHccC------CC-HHHHHHHHHHHHHh
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD--ATSEKELGNECFKQKKFKEAIDCYSRSIALS------PT-AVAYANRAMAYLKL 130 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~--a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~------p~-~~~~~~la~~~~~~ 130 (372)
..|++++|+..|++++..+|.++. +..+..+|.+++..|++++|+.+|++++.+. +. ..++..+|.+|..+
T Consensus 17 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (338)
T 3ro2_A 17 KSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVL 96 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHc
Confidence 679999999999999999988654 4568899999999999999999999999873 23 78899999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCC--------------------HHHHHHHHHHHHccC
Q 017383 131 RRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGK--------------------LKESIEDSEFALRLE 181 (372)
Q Consensus 131 g~~~eA~~~~~~Al~l~p~~------~~a~~~lg~~~~~lg~--------------------~~~A~~~~~~al~l~ 181 (372)
|++++|+..+.+++.+.+.. ..++..+|.++..+|+ +++|+..|++++.+.
T Consensus 97 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~ 173 (338)
T 3ro2_A 97 GNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLV 173 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999986543 4589999999999999 999999999998763
No 171
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.23 E-value=1.2e-11 Score=117.49 Aligned_cols=124 Identities=22% Similarity=0.245 Sum_probs=88.1
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch----HHHHHHHHHHHHHhhc--------------------HHHHHHHHHHHHccC-
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKK--------------------FKEAIDCYSRSIALS- 114 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~----a~~~~~~g~~~~~~g~--------------------~~~Ai~~y~~al~~~- 114 (372)
..|++++|+.++.+++...+.... +.++..+|.+|...|+ |++|+.+|.+++.+.
T Consensus 99 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~ 178 (406)
T 3sf4_A 99 VLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVT 178 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 567777777777777776543322 4456677777777777 777877777777652
Q ss_pred -----CC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 017383 115 -----PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 115 -----p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P 182 (372)
+. ..++.++|.+|..+|++++|+.++++++.+.+.. ..++.++|.++..+|++++|+.+|++++.+.|
T Consensus 179 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 258 (406)
T 3sf4_A 179 ALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLAR 258 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 12 5667777888888888888888888877775543 23777778888888888888888888777655
Q ss_pred C
Q 017383 183 Q 183 (372)
Q Consensus 183 ~ 183 (372)
.
T Consensus 259 ~ 259 (406)
T 3sf4_A 259 Q 259 (406)
T ss_dssp H
T ss_pred h
Confidence 4
No 172
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.22 E-value=1.8e-10 Score=115.26 Aligned_cols=142 Identities=9% Similarity=-0.012 Sum_probs=121.4
Q ss_pred CCCch-------hhHHHHHhhhh-cCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-H-HHHHHHHHHHHHh
Q 017383 61 YSRNY-------DPVSHISSSLM-NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-A-VAYANRAMAYLKL 130 (372)
Q Consensus 61 ~g~~~-------~A~~~~~~al~-~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~-~~~~~la~~~~~~ 130 (372)
.|+++ +|+..|++++. ..|++.. .+..+|..+...|++++|...|++++++.|. . .+|.++|.++...
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~--l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~ 369 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAISTLLKKNML--LYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA 369 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTTTCSSCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhCcccHH--HHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHh
Confidence 68887 89999999997 7888544 4779999999999999999999999999997 4 6899999999999
Q ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHH-HHHcCCHHHHHHHHHHHHccCCCcHHHHHH----------HHHHHHHHH
Q 017383 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATA-RKELGKLKESIEDSEFALRLEPQNQEIKKQ----------LAEVKSLYE 199 (372)
Q Consensus 131 g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~-~~~lg~~~~A~~~~~~al~l~P~~~~~~~~----------l~~a~~~~~ 199 (372)
|++++|+..|.+|++..|.....+...+.+ +...|++++|...|+++++..|++..++.. ..+|+..|+
T Consensus 370 ~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~ 449 (530)
T 2ooe_A 370 EGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFE 449 (530)
T ss_dssp HHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHH
Confidence 999999999999999999888887776655 456999999999999999999999887643 445555666
Q ss_pred HHHHh
Q 017383 200 KEVFQ 204 (372)
Q Consensus 200 ~~~~~ 204 (372)
+++..
T Consensus 450 ~al~~ 454 (530)
T 2ooe_A 450 RVLTS 454 (530)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 55544
No 173
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.21 E-value=4.3e-11 Score=94.83 Aligned_cols=104 Identities=14% Similarity=0.166 Sum_probs=92.9
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC--------HHHHHHHHHHHHHhc
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--------AVAYANRAMAYLKLR 131 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~--------~~~~~~la~~~~~~g 131 (372)
..|++++|+..|.+++..+|.+. ..+..+|.+++..|+|++|+.+|.+++.++|. ..+++++|.+|..+|
T Consensus 16 ~~~~~~~A~~~~~~a~~~~~~~~--~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 93 (131)
T 1elr_A 16 KKKDFDTALKHYDKAKELDPTNM--TYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEE 93 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HhcCHHHHHHHHHHHHhcCCccH--HHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 67899999999999999998854 45779999999999999999999999998763 678999999999999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 017383 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~ 166 (372)
++++|+.+|++++.++| +...+..++.+...+++
T Consensus 94 ~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 94 KYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKE 127 (131)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHH
Confidence 99999999999999999 68888888887766543
No 174
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=99.21 E-value=1.4e-10 Score=109.94 Aligned_cols=104 Identities=13% Similarity=0.089 Sum_probs=93.4
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-C
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR-RFQEAEDDCTEALNLDDRYIKAYSRRATARKEL-G 165 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g-~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~l-g 165 (372)
.+..+....+..++|+.++.++|.++|. ..+|+.|+.++..+| .+++++..+..++..+|.+..+|+.++.++..+ +
T Consensus 59 ~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~ 138 (349)
T 3q7a_A 59 YFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISP 138 (349)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcC
Confidence 4444555556668999999999999999 999999999999999 599999999999999999999999999999998 8
Q ss_pred -CHHHHHHHHHHHHccCCCcHHHHHHHH
Q 017383 166 -KLKESIEDSEFALRLEPQNQEIKKQLA 192 (372)
Q Consensus 166 -~~~~A~~~~~~al~l~P~~~~~~~~l~ 192 (372)
++++++..+.+++.++|.|..++....
T Consensus 139 ~~~~~EL~~~~k~L~~dpkNy~AW~~R~ 166 (349)
T 3q7a_A 139 QDPVSEIEYIHGSLLPDPKNYHTWAYLH 166 (349)
T ss_dssp SCCHHHHHHHHHHTSSCTTCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 999999999999999999998874433
No 175
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.18 E-value=9.5e-11 Score=89.44 Aligned_cols=87 Identities=16% Similarity=0.311 Sum_probs=78.6
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH--HHHHHHHH
Q 017383 120 YANRAMAYLKLRRFQEAEDDCTEALNLDDRYIK-AYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK--KQLAEVKS 196 (372)
Q Consensus 120 ~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~-a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~--~~l~~a~~ 196 (372)
.+++|.+++..|++++|+..|++++.++|++.. +++.+|.++..+|++++|+.+|++++.++|++..++ ..+.++..
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~a~~ 82 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQARKMVMDILN 82 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999 999999999999999999999999999999999887 77888877
Q ss_pred HHHHHHHhhh
Q 017383 197 LYEKEVFQKA 206 (372)
Q Consensus 197 ~~~~~~~~~~ 206 (372)
.|++.....+
T Consensus 83 ~~~~~~~~~p 92 (99)
T 2kc7_A 83 FYNKDMYNQL 92 (99)
T ss_dssp HHCCTTHHHH
T ss_pred HHHHHhccCc
Confidence 7766554443
No 176
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.17 E-value=3.4e-10 Score=84.35 Aligned_cols=80 Identities=34% Similarity=0.408 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
+.+++++|.++...|++++|+.+|++++.++|.+..+++++|.++...|++++|+..|++++.++|++..++..+..+..
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~ 88 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQ 88 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999988877776643
No 177
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.17 E-value=3.8e-10 Score=87.26 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
+.++.++|.+++..|+|++|+..|++++.++|+++.+++++|.++..+|++++|+.+|++++.++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 56789999999999999999999999999999999999999999999999999999999999999998
No 178
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.15 E-value=1.1e-10 Score=95.52 Aligned_cols=100 Identities=18% Similarity=0.269 Sum_probs=89.7
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC-----
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY----- 150 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~----- 150 (372)
.+.++..+|.+++..|+|++|+.+|.+++.+.+. ..++.++|.++..+|++++|+.++++++.+.+..
T Consensus 8 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 87 (164)
T 3ro3_A 8 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAV 87 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHH
Confidence 4567889999999999999999999999998643 4689999999999999999999999999986543
Q ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 017383 151 -IKAYSRRATARKELGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 151 -~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P 182 (372)
..+++++|.++..+|++++|+..|++++.+.+
T Consensus 88 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 88 EAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 67899999999999999999999999998743
No 179
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.15 E-value=5.1e-11 Score=109.45 Aligned_cols=122 Identities=21% Similarity=0.242 Sum_probs=59.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch----HHHHHHHHHHHHHhhc--------------------HHHHHHHHHHHHccCC
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKK--------------------FKEAIDCYSRSIALSP 115 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~----a~~~~~~g~~~~~~g~--------------------~~~Ai~~y~~al~~~p 115 (372)
..|++++|+..+.+++...+.... +.++..+|.++...|+ +++|+.+|.+++.+.+
T Consensus 95 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~ 174 (338)
T 3ro2_A 95 VLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVT 174 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555544332211 2234455555555555 5555555555544311
Q ss_pred ------C-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHccC
Q 017383 116 ------T-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSRRATARKELGKLKESIEDSEFALRLE 181 (372)
Q Consensus 116 ------~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~ 181 (372)
. ..++.++|.++..+|++++|+..+++++.+.+.. ..++..+|.++...|++++|+..|++++.+.
T Consensus 175 ~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 253 (338)
T 3ro2_A 175 ALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 253 (338)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 1 3445555555555555555555555555443322 2245555555555555555555555555443
No 180
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.15 E-value=2.7e-10 Score=87.86 Aligned_cols=71 Identities=15% Similarity=0.191 Sum_probs=61.6
Q ss_pred CCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 114 SPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 114 ~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
+|+ +.+++++|.+|+.+|++++|+.+|+++++++|+++.+|+++|.++..+|++++|+..|++++.+.|.+
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 566 88889999999999999999999999999999999999999999999999999999999999887644
No 181
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.13 E-value=6.8e-10 Score=105.25 Aligned_cols=124 Identities=9% Similarity=-0.005 Sum_probs=106.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCc---hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTP---DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLK 129 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~---~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~ 129 (372)
..|++++|+..+++++...|... .+.++..+|.+++..|++++|+.+|.+++.+.+. ..++.++|.++..
T Consensus 26 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 105 (373)
T 1hz4_A 26 NDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA 105 (373)
T ss_dssp HTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 56899999999999999876543 2335778999999999999999999999987643 4557899999999
Q ss_pred hcCHHHHHHHHHHHHhcC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCC
Q 017383 130 LRRFQEAEDDCTEALNLD--------DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQ 183 (372)
Q Consensus 130 ~g~~~eA~~~~~~Al~l~--------p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~ 183 (372)
.|++++|+..|++++.+. |....++.++|.++...|++++|...+++++.+.+.
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 999999999999999875 445677888999999999999999999999998875
No 182
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=99.12 E-value=3.4e-10 Score=104.05 Aligned_cols=117 Identities=14% Similarity=0.076 Sum_probs=93.7
Q ss_pred HHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCC
Q 017383 90 LGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAYSRRATARKELGK 166 (372)
Q Consensus 90 ~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~--~~a~~~lg~~~~~lg~ 166 (372)
++..+...|+|++|.+.|..++...|. . +++.+|.+++..++|++|+..|+.++...+.. ..+++++|.++..+|+
T Consensus 108 yA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~ 186 (282)
T 4f3v_A 108 FAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLAL 186 (282)
T ss_dssp HHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCC
Confidence 456788899999999999999988888 6 89999999999999999999999887764332 4589999999999999
Q ss_pred HHHHHHHHHHHHccC--CC-cHHHH----------HHHHHHHHHHHHHHHhhhh
Q 017383 167 LKESIEDSEFALRLE--PQ-NQEIK----------KQLAEVKSLYEKEVFQKAS 207 (372)
Q Consensus 167 ~~~A~~~~~~al~l~--P~-~~~~~----------~~l~~a~~~~~~~~~~~~~ 207 (372)
+++|+.+|++++.-. |. ..++. ++..+|...|++.+...|.
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 999999999998654 54 44443 4556666666666666554
No 183
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.11 E-value=5.9e-10 Score=111.45 Aligned_cols=142 Identities=13% Similarity=0.064 Sum_probs=121.4
Q ss_pred hhhHHHHHhhhhcCCCCchHHHHHHHHHHHHH-------hhcHH-------HHHHHHHHHHc-cCCC-HHHHHHHHHHHH
Q 017383 65 YDPVSHISSSLMNEESTPDATSEKELGNECFK-------QKKFK-------EAIDCYSRSIA-LSPT-AVAYANRAMAYL 128 (372)
Q Consensus 65 ~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~-------~g~~~-------~Ai~~y~~al~-~~p~-~~~~~~la~~~~ 128 (372)
.+++..|++++..+|.++.. |..+|..+.. .|+++ +|+..|++|+. ++|+ ..+|..+|..+.
T Consensus 255 ~~a~~~y~~al~~~p~~~~~--w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~ 332 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDI--WYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEE 332 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHH--HHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHH--HHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence 37788999999999996555 6688998886 79987 99999999997 7998 999999999999
Q ss_pred HhcCHHHHHHHHHHHHhcCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH-----------HHHHHHHH
Q 017383 129 KLRRFQEAEDDCTEALNLDDRYI-KAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK-----------KQLAEVKS 196 (372)
Q Consensus 129 ~~g~~~eA~~~~~~Al~l~p~~~-~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~-----------~~l~~a~~ 196 (372)
..|++++|...|++++.++|.++ .+|..+|.++...|++++|...|++++...|.+...+ +...+|..
T Consensus 333 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~ 412 (530)
T 2ooe_A 333 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFK 412 (530)
T ss_dssp HTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHH
T ss_pred hcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHH
Confidence 99999999999999999999985 6999999999999999999999999999988754432 23456677
Q ss_pred HHHHHHHhhhhh
Q 017383 197 LYEKEVFQKASK 208 (372)
Q Consensus 197 ~~~~~~~~~~~~ 208 (372)
.|++++...|..
T Consensus 413 ~~e~al~~~p~~ 424 (530)
T 2ooe_A 413 IFELGLKKYGDI 424 (530)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHCCCC
Confidence 777776665543
No 184
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.11 E-value=3.3e-10 Score=87.16 Aligned_cols=89 Identities=16% Similarity=0.177 Sum_probs=83.1
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC---HHHHHHHHHHHHHh-cCHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT---AVAYANRAMAYLKL-RRFQE 135 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~---~~~~~~la~~~~~~-g~~~e 135 (372)
..|++++|+..|.+++..+|.... .+..+|.+++..|+|++|+.+|+++++++|. ..++.++|.++..+ |++++
T Consensus 18 ~~~~~~~A~~~~~~a~~~~~~~~~--~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 95 (112)
T 2kck_A 18 DAGNYTESIDLFEKAIQLDPEESK--YWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVE 95 (112)
T ss_dssp SSCCHHHHHHHHHHHHHHCCCCHH--HHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHH
T ss_pred HhhhHHHHHHHHHHHHHhCcCCHH--HHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHH
Confidence 789999999999999999998544 4779999999999999999999999999986 88999999999999 99999
Q ss_pred HHHHHHHHHhcCCCC
Q 017383 136 AEDDCTEALNLDDRY 150 (372)
Q Consensus 136 A~~~~~~Al~l~p~~ 150 (372)
|+.++++++..+|..
T Consensus 96 A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 96 AEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHHHHHGGGCCCC
T ss_pred HHHHHHHHhhcccCC
Confidence 999999999999875
No 185
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.05 E-value=2.7e-09 Score=87.47 Aligned_cols=112 Identities=13% Similarity=0.013 Sum_probs=101.0
Q ss_pred CCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHH----hcCHHHHH
Q 017383 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK----LRRFQEAE 137 (372)
Q Consensus 62 g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~----~g~~~eA~ 137 (372)
+|+++|+.+|+++.+... +.+. +|.+|...+.+++|+.+|+++.+. -++.+++++|.+|.. .+++++|+
T Consensus 9 ~d~~~A~~~~~~aa~~g~--~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~-g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 9 KDLKKAIQYYVKACELNE--MFGC----LSLVSNSQINKQKLFQYLSKACEL-NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHTTC--TTHH----HHHHTCTTSCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHcCCC--Hhhh----HHHHHHcCCCHHHHHHHHHHHHcC-CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 478999999999999873 3553 899999999999999999999986 338999999999999 89999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCC
Q 017383 138 DDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 138 ~~~~~Al~l~p~~~~a~~~lg~~~~~----lg~~~~A~~~~~~al~l~P 182 (372)
.+|++|.+. .++.+++++|.+|.. .+++++|+.+|+++.++..
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCC
Confidence 999999987 789999999999999 9999999999999998843
No 186
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.04 E-value=7.7e-10 Score=85.24 Aligned_cols=86 Identities=16% Similarity=0.237 Sum_probs=70.1
Q ss_pred CCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC--HHHH
Q 017383 78 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY--IKAY 154 (372)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~--~~a~ 154 (372)
+|++ +.+++.+|.+|+..|+|++|+.+|+++++++|+ ..+|+++|.+|..+|++++|+..|++++.+.|.. ..+.
T Consensus 3 ~p~~--~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~ 80 (100)
T 3ma5_A 3 DPED--PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDL 80 (100)
T ss_dssp --CC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHH
T ss_pred CccC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHH
Confidence 5664 444779999999999999999999999999999 9999999999999999999999999999987643 4444
Q ss_pred HHHHHHHHHcC
Q 017383 155 SRRATARKELG 165 (372)
Q Consensus 155 ~~lg~~~~~lg 165 (372)
..+..++...+
T Consensus 81 ~~l~~~l~~~~ 91 (100)
T 3ma5_A 81 SELQDAKLKAE 91 (100)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHcc
Confidence 44444444433
No 187
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.04 E-value=5.3e-10 Score=111.11 Aligned_cols=120 Identities=9% Similarity=-0.041 Sum_probs=99.0
Q ss_pred CCCCchhhHHHHHhhhhc-----CCCCc-hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC-----CC----HHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMN-----EESTP-DATSEKELGNECFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRA 124 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~-----~p~~~-~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~-----p~----~~~~~~la 124 (372)
.+|+|++|+..|+++|++ .|+++ -+..+.++|.+|..+|+|++|+.+|+++|++. |+ +..++|+|
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 400 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAG 400 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 678999999999999873 34443 35668899999999999999999999999862 33 78899999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 017383 125 MAYLKLRRFQEAEDDCTEALNL-----DDRY---IKAYSRRATARKELGKLKESIEDSEFALR 179 (372)
Q Consensus 125 ~~~~~~g~~~eA~~~~~~Al~l-----~p~~---~~a~~~lg~~~~~lg~~~~A~~~~~~al~ 179 (372)
.+|..+|+|++|+..|++|+.+ .|++ .....+++.++..+|.|++|...|.++.+
T Consensus 401 ~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 401 LTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875 4555 45567889999999999999999887753
No 188
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.98 E-value=2.2e-09 Score=101.71 Aligned_cols=122 Identities=12% Similarity=0.061 Sum_probs=107.0
Q ss_pred CCCCchhhHHHHHhhhhcCCCCch----HHHHHHHHHHHHHhhcHHHHHHHHHHHHccC--------CC-HHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPD----ATSEKELGNECFKQKKFKEAIDCYSRSIALS--------PT-AVAYANRAMA 126 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~----a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~--------p~-~~~~~~la~~ 126 (372)
..|++++|+..+.+++...+.... +.++..+|.+++..|+|++|+.+|++++.+. |. ..++.++|.+
T Consensus 65 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 144 (373)
T 1hz4_A 65 CKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQL 144 (373)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHH
Confidence 679999999999999987654432 3457789999999999999999999999875 33 6778899999
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC
Q 017383 127 YLKLRRFQEAEDDCTEALNLDDR-----YIKAYSRRATARKELGKLKESIEDSEFALRLE 181 (372)
Q Consensus 127 ~~~~g~~~eA~~~~~~Al~l~p~-----~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~ 181 (372)
+..+|++++|+..+++++.+.+. ...++..+|.++...|++++|...+++++.+.
T Consensus 145 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 145 LWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 99999999999999999998765 35788999999999999999999999999874
No 189
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.94 E-value=1.1e-08 Score=101.01 Aligned_cols=114 Identities=17% Similarity=0.051 Sum_probs=77.9
Q ss_pred CCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHh-----hcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhc---C
Q 017383 61 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ-----KKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLR---R 132 (372)
Q Consensus 61 ~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~-----g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g---~ 132 (372)
.+++++|+.+|+++++.. ...+++.+|.+|... +++++|+.+|+++++..+ ..+++++|.+|...| +
T Consensus 272 ~~d~~~A~~~~~~a~~~~----~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~~a~~~~~-~~a~~~lg~~y~~~g~~~~ 346 (490)
T 2xm6_A 272 AKEPLKALEWYRKSAEQG----NSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGD-ATAQANLGAIYFRLGSEEE 346 (490)
T ss_dssp SCCHHHHHHHHHHHHTTT----CHHHHHHHHHHHHHCBTTBCCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHHSCCHHH
T ss_pred CCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhCCCccc
Confidence 467777777777777654 223355777777766 677777777777776532 566777777777654 6
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccC
Q 017383 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLE 181 (372)
Q Consensus 133 ~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~----lg~~~~A~~~~~~al~l~ 181 (372)
+++|+.+|+++++. .++.+++++|.+|.. .+++++|+.+|++++...
T Consensus 347 ~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~~ 397 (490)
T 2xm6_A 347 HKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQG 397 (490)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhCC
Confidence 77777777777765 456777777777777 677777777777777654
No 190
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.90 E-value=1.7e-08 Score=83.70 Aligned_cols=97 Identities=12% Similarity=0.043 Sum_probs=84.1
Q ss_pred hcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhc---CHHHHHHHHHHHHhcC-C-CCHHHHHHHHHHHHHcCCHHHHH
Q 017383 98 KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLR---RFQEAEDDCTEALNLD-D-RYIKAYSRRATARKELGKLKESI 171 (372)
Q Consensus 98 g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g---~~~eA~~~~~~Al~l~-p-~~~~a~~~lg~~~~~lg~~~~A~ 171 (372)
.....+...|.+.+..++. ..+.+++|.|+.+.+ ++++++..++..++.+ | +..+++|++|..++.+|+|++|.
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~ 91 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKAL 91 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHH
Confidence 4456677788888887766 999999999999988 7779999999999998 7 67999999999999999999999
Q ss_pred HHHHHHHccCCCcHHHHHHHHHH
Q 017383 172 EDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 172 ~~~~~al~l~P~~~~~~~~l~~a 194 (372)
.+++++|+++|+|.++......+
T Consensus 92 ~y~~~lL~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 92 KYVRGLLQTEPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCHHHHHHHHHH
Confidence 99999999999999887554443
No 191
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.87 E-value=1.6e-08 Score=99.42 Aligned_cols=119 Identities=11% Similarity=0.026 Sum_probs=77.0
Q ss_pred CchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHh----hcHHHHHHHHHHHHccCCC-HHHHHHHHHH-H--HHhcCHH
Q 017383 63 RNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ----KKFKEAIDCYSRSIALSPT-AVAYANRAMA-Y--LKLRRFQ 134 (372)
Q Consensus 63 ~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~----g~~~~Ai~~y~~al~~~p~-~~~~~~la~~-~--~~~g~~~ 134 (372)
++++|+..|+++....+. .+..++++|.+|... +++++|+.+|+++. |. +.+++++|.+ | ...++++
T Consensus 194 ~~~~A~~~~~~aa~~g~~--~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~ 268 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRGTV--TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVE 268 (452)
T ss_dssp HHHHHHHHHHHHHHTTCS--CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHH
T ss_pred cHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHH
Confidence 666777777777776655 444345667666544 56777777777766 44 6667777776 3 3566777
Q ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHccCCCcHHHHHHHH
Q 017383 135 EAEDDCTEALNLDDRYIKAYSRRATARKELG-----KLKESIEDSEFALRLEPQNQEIKKQLA 192 (372)
Q Consensus 135 eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg-----~~~~A~~~~~~al~l~P~~~~~~~~l~ 192 (372)
+|+.+|++++.. .++.+++++|.+|. .| ++++|+.+|+++. ++++.+...++
T Consensus 269 ~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg 325 (452)
T 3e4b_A 269 QMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLG 325 (452)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHH
T ss_pred HHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHH
Confidence 777777776654 36677777777666 45 7777777777776 66666654444
No 192
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.86 E-value=6.5e-08 Score=95.56 Aligned_cols=119 Identities=13% Similarity=-0.038 Sum_probs=94.1
Q ss_pred CCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHH----hhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHH----hcC
Q 017383 61 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK----QKKFKEAIDCYSRSIALSPTAVAYANRAMAYLK----LRR 132 (372)
Q Consensus 61 ~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~----~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~----~g~ 132 (372)
.+++++|+.+|+++++.. .+.+++.+|..|.. .+++++|+.+|+++++.. ++.+++++|.+|.. .++
T Consensus 56 ~~~~~~A~~~~~~a~~~~----~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~-~~~a~~~Lg~~y~~g~g~~~~ 130 (490)
T 2xm6_A 56 TKDLTQAMDWFRRAAEQG----YTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG-LPQAQQNLGVMYHEGNGVKVD 130 (490)
T ss_dssp CCCHHHHHHHHHHHHHTT----CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCC
T ss_pred CcCHHHHHHHHHHHHHCC----CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC-CHHHHHHHHHHHHcCCCCCCC
Confidence 578888888888888763 34446688888888 888888888888887653 37788888888888 788
Q ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHccCCCcHHHH
Q 017383 133 FQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 133 ~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~----lg~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
+++|+.+|++++.. .++.+++.+|.+|.. .+++++|+.+|++++.. ++..++
T Consensus 131 ~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~a~ 186 (490)
T 2xm6_A 131 KAESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVWSC 186 (490)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHH
T ss_pred HHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHH
Confidence 88888888888775 578888888888887 78888888888888876 345554
No 193
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.84 E-value=2.7e-08 Score=94.31 Aligned_cols=123 Identities=11% Similarity=0.073 Sum_probs=96.3
Q ss_pred CCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhc-------HHHHHH-HHHH--HHccCCC-HHHHHHHHHHHHH
Q 017383 61 YSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKK-------FKEAID-CYSR--SIALSPT-AVAYANRAMAYLK 129 (372)
Q Consensus 61 ~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~-------~~~Ai~-~y~~--al~~~p~-~~~~~~la~~~~~ 129 (372)
..++.+|+.+|+++++++|++..+++ .++.+|.-... ...++. .+.. ++..+|. +.++..+|.+++.
T Consensus 212 ~~~~~~A~~l~e~Al~lDP~~a~A~A--~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~ 289 (372)
T 3ly7_A 212 DKSLNRASELLGEIVQSSPEFTYARA--EKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALV 289 (372)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCHHHHH--HHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHH--HHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHh
Confidence 35678999999999999999777766 45555532111 111222 2222 2345566 8899999999999
Q ss_pred hcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHH
Q 017383 130 LRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQE 186 (372)
Q Consensus 130 ~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~ 186 (372)
.|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.|++|+.++|..+.
T Consensus 290 ~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 290 KGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred CCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 99999999999999999975 778899999999999999999999999999998753
No 194
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.83 E-value=4.3e-08 Score=97.36 Aligned_cols=100 Identities=12% Similarity=0.054 Sum_probs=86.2
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccC-----CC----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---H
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDRY---I 151 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~-----p~----~~~~~~la~~~~~~g~~~eA~~~~~~Al~l-----~p~~---~ 151 (372)
..+..+..+|+|++|+..|+++|++. |+ +..+.++|.+|..+|+|++|+..+++++.+ .|++ .
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 44556778999999999999999862 32 788999999999999999999999999976 3444 6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcc-----CCCcHHHH
Q 017383 152 KAYSRRATARKELGKLKESIEDSEFALRL-----EPQNQEIK 188 (372)
Q Consensus 152 ~a~~~lg~~~~~lg~~~~A~~~~~~al~l-----~P~~~~~~ 188 (372)
..++++|.+|..+|+|++|+..|++|+.+ .|+++...
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~ 435 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITK 435 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHH
Confidence 67999999999999999999999999974 68887764
No 195
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.82 E-value=3.5e-09 Score=102.15 Aligned_cols=163 Identities=8% Similarity=-0.006 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCccccccc---cc-----cCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchH----HH
Q 017383 20 QDWDLSLNEKDKKMKHKASSKDNLVSSSL---KS-----AKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDA----TS 86 (372)
Q Consensus 20 ~~~e~~ik~~~~~l~~~~~~~~~~~~~~~---~~-----~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a----~~ 86 (372)
++|+++++.....+...+........... .. +...+|..| ..|++++|+++|.+++...+....+ ..
T Consensus 18 ~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 97 (434)
T 4b4t_Q 18 KQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVL 97 (434)
T ss_dssp TCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 67777777777766544422111100000 00 002344555 7899999999999999877665443 34
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------CCCCHHH
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNL------DDRYIKA 153 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~~~~~~la~~~~~~g~~~eA~~~~~~Al~l------~p~~~~a 153 (372)
...+|.++...|+++.|+.+|.+++...+. +.++.++|.+|...|+|.+|+..+.+++.. .+....+
T Consensus 98 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~ 177 (434)
T 4b4t_Q 98 KTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDV 177 (434)
T ss_dssp HHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 567888888999999999999999986422 788999999999999999999999999875 3445788
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHccCC
Q 017383 154 YSRRATARKELGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 154 ~~~lg~~~~~lg~~~~A~~~~~~al~l~P 182 (372)
+..+|.++..+|++++|...+++++.+.+
T Consensus 178 ~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 178 HLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999998753
No 196
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.78 E-value=2.6e-08 Score=95.89 Aligned_cols=121 Identities=15% Similarity=-0.004 Sum_probs=104.4
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchH---------------HHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-------H
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDA---------------TSEKELGNECFKQKKFKEAIDCYSRSIALSPT-------A 117 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a---------------~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-------~ 117 (372)
..|+|++|++.|.+++...+...+. .++..+|.+|+..|+|++|+.+|.+++...+. .
T Consensus 16 ~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 95 (434)
T 4b4t_Q 16 NEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVK 95 (434)
T ss_dssp HHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHH
Confidence 5689999999999999988775331 24779999999999999999999999987654 3
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 118 VAYANRAMAYLKLRRFQEAEDDCTEALNLD------DRYIKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 118 ~~~~~la~~~~~~g~~~eA~~~~~~Al~l~------p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
.++.++|.++...|++++|+..++.++... +....++.++|.++...|+|++|...+++++..
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~ 164 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLRE 164 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHH
Confidence 567788999999999999999999998764 334788999999999999999999999999865
No 197
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.77 E-value=4.8e-08 Score=105.66 Aligned_cols=105 Identities=21% Similarity=0.273 Sum_probs=71.5
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC------------------
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDD------------------ 148 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p------------------ 148 (372)
+..+|..|+..|+|++|+.+|.++ ..|..+|.||.++|++++|++.+.+|....+
T Consensus 1198 ~~~iGd~le~eg~YeeA~~~Y~kA-------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~ 1270 (1630)
T 1xi4_A 1198 IQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQ 1270 (1630)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhh-------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHH
Confidence 445666666677777777776664 4677778888888888888888877744332
Q ss_pred -------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHH
Q 017383 149 -------RYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLY 198 (372)
Q Consensus 149 -------~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~ 198 (372)
.+++.+..++..|...|.+++|+..|+.+|.+++.+...+..+..+...|
T Consensus 1271 ~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy 1327 (1630)
T 1xi4_A 1271 MCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKF 1327 (1630)
T ss_pred HHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhC
Confidence 13334556667777888888888888888888887776665555444433
No 198
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.76 E-value=6.8e-08 Score=75.00 Aligned_cols=72 Identities=13% Similarity=0.056 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHccC-------CC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHH
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIALS-------PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRA 158 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~~-------p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg 158 (372)
++.+|..++..|+|..|+.+|+.|+... +. ..++.++|.|++++|+++.|+..+++++.++|++..+..+++
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 4566666666666666666666666542 11 455555555555555555555555555555555555555544
No 199
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.76 E-value=1.2e-07 Score=73.60 Aligned_cols=78 Identities=15% Similarity=0.065 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHH
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEALNLD-------DRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK 189 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~-------p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~ 189 (372)
+.-++.+|..++..|+|..|+.+|+.|+... +....++..+|.++..+|+++.|+..++++++++|++..+..
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~ 84 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANG 84 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHh
Confidence 4567899999999999999999999999863 346888999999999999999999999999999999998877
Q ss_pred HHHHH
Q 017383 190 QLAEV 194 (372)
Q Consensus 190 ~l~~a 194 (372)
++...
T Consensus 85 n~~~~ 89 (104)
T 2v5f_A 85 NLKYF 89 (104)
T ss_dssp HHHHH
T ss_pred hHHHH
Confidence 66533
No 200
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.72 E-value=1.3e-07 Score=72.10 Aligned_cols=71 Identities=21% Similarity=0.123 Sum_probs=64.6
Q ss_pred CCC-HHHHHHHHHHHHHhcC---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 114 SPT-AVAYANRAMAYLKLRR---FQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 114 ~p~-~~~~~~la~~~~~~g~---~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
+|+ +.++..+|.+++..++ ..+|...+++|+.++|+++.+++.+|..++..|+|++|+..|++++..+|.+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 455 8889999999987666 7999999999999999999999999999999999999999999999999984
No 201
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.70 E-value=9.4e-08 Score=93.44 Aligned_cols=95 Identities=8% Similarity=-0.030 Sum_probs=81.4
Q ss_pred HHhhcHHHHHHHHHHHHcc-----CCC----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---HHHHHHH
Q 017383 95 FKQKKFKEAIDCYSRSIAL-----SPT----AVAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDRY---IKAYSRR 157 (372)
Q Consensus 95 ~~~g~~~~Ai~~y~~al~~-----~p~----~~~~~~la~~~~~~g~~~eA~~~~~~Al~l-----~p~~---~~a~~~l 157 (372)
...|+|++|+..|+++|++ .|+ +..+.++|.+|..+|+|++|+..+++++.+ .|++ +..++++
T Consensus 309 ~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nL 388 (433)
T 3qww_A 309 KHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKL 388 (433)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHH
Confidence 3467899999999999985 233 788999999999999999999999999976 3444 6679999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHcc-----CCCcHHHHH
Q 017383 158 ATARKELGKLKESIEDSEFALRL-----EPQNQEIKK 189 (372)
Q Consensus 158 g~~~~~lg~~~~A~~~~~~al~l-----~P~~~~~~~ 189 (372)
|.+|..+|++++|+..|++|+.+ .|+++....
T Consensus 389 a~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 425 (433)
T 3qww_A 389 GRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISE 425 (433)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHH
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 99999999999999999999975 578776543
No 202
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.70 E-value=1.3e-07 Score=92.50 Aligned_cols=101 Identities=11% Similarity=0.054 Sum_probs=85.7
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccC-----CC----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCCC---H
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRAMAYLKLRRFQEAEDDCTEALNL-----DDRY---I 151 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~-----p~----~~~~~~la~~~~~~g~~~eA~~~~~~Al~l-----~p~~---~ 151 (372)
.....+..+|+|++|+..|++++++. |+ +.++.++|.+|..+|+|++|+..+++++.+ .|++ .
T Consensus 292 ~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a 371 (429)
T 3qwp_A 292 KKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRG 371 (429)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHH
Confidence 33445678999999999999999863 33 788999999999999999999999999976 3444 6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHcc-----CCCcHHHHH
Q 017383 152 KAYSRRATARKELGKLKESIEDSEFALRL-----EPQNQEIKK 189 (372)
Q Consensus 152 ~a~~~lg~~~~~lg~~~~A~~~~~~al~l-----~P~~~~~~~ 189 (372)
..++++|.+|..+|++++|+..|++|+.+ .|+++....
T Consensus 372 ~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~ 414 (429)
T 3qwp_A 372 VQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIED 414 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 67999999999999999999999999974 688876643
No 203
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.69 E-value=1.5e-07 Score=92.48 Aligned_cols=117 Identities=12% Similarity=0.057 Sum_probs=96.6
Q ss_pred HHHHHhhhhcCCCCchHHHHHHHHHHHHHhh---cHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHh----cCHHHHHHH
Q 017383 68 VSHISSSLMNEESTPDATSEKELGNECFKQK---KFKEAIDCYSRSIALSPT-AVAYANRAMAYLKL----RRFQEAEDD 139 (372)
Q Consensus 68 ~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g---~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~----g~~~eA~~~ 139 (372)
..++..+...+| . +++.+|.+|...| ++++|+.+|+++++..+. +..++++|.+|... +++++|+.+
T Consensus 165 ~~~~~~a~~~~~---~--a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~ 239 (452)
T 3e4b_A 165 ERICKAALNTTD---I--CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQAL 239 (452)
T ss_dssp HHHHHHHTTTCT---T--HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHH
T ss_pred HHHHHHHHcCCH---H--HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHH
Confidence 334444444444 3 4679999999999 999999999999999887 88889999999776 799999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHH-H--HHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 140 CTEALNLDDRYIKAYSRRATA-R--KELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 140 ~~~Al~l~p~~~~a~~~lg~~-~--~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
|+++. |.++.+++++|.+ + ...|++++|+.+|+++.... +..+...++.+
T Consensus 240 ~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g--~~~A~~~Lg~~ 292 (452)
T 3e4b_A 240 LEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD--QPRAELLLGKL 292 (452)
T ss_dssp HHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT--CHHHHHHHHHH
T ss_pred HHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC--CHHHHHHHHHH
Confidence 99998 9999999999998 4 57899999999999998654 66666555544
No 204
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.69 E-value=2.6e-07 Score=85.88 Aligned_cols=115 Identities=8% Similarity=-0.050 Sum_probs=73.2
Q ss_pred hHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCC--C-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017383 67 PVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP--T-AVAYANRAMAYLKLRRFQEAEDDCTEA 143 (372)
Q Consensus 67 A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p--~-~~~~~~la~~~~~~g~~~eA~~~~~~A 143 (372)
|+..+++.+...+....+ +..+|.++...|++++|+.++.++|..+| . ..++..++.+++.+|+.+.|.+.+++.
T Consensus 85 a~~~l~~l~~~~~~~~~~--~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~ 162 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYE--LYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNY 162 (310)
T ss_dssp CCHHHHHTTTTSCCCHHH--HHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHH--HHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 566777766654332222 34677777777777777777777777765 3 666777777777777777777777777
Q ss_pred HhcCCC----CHHHHHHH--HHHHHHcC--CHHHHHHHHHHHHccCCC
Q 017383 144 LNLDDR----YIKAYSRR--ATARKELG--KLKESIEDSEFALRLEPQ 183 (372)
Q Consensus 144 l~l~p~----~~~a~~~l--g~~~~~lg--~~~~A~~~~~~al~l~P~ 183 (372)
.+.+|+ +-.....+ |++....| ++.+|...|+++....|+
T Consensus 163 ~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 163 TNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 777762 12222333 33344445 677777777777666665
No 205
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.67 E-value=3e-07 Score=85.48 Aligned_cols=126 Identities=8% Similarity=-0.079 Sum_probs=89.3
Q ss_pred CCCCchhhHHHHHhhhhcCC--CCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCC-----CHHHHHHHH--HHHHHh
Q 017383 60 SYSRNYDPVSHISSSLMNEE--STPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP-----TAVAYANRA--MAYLKL 130 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p--~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p-----~~~~~~~la--~~~~~~ 130 (372)
..|++++|+..+.+++..+| ...++.. ..+.++.+.|+.+.|...+++..+.+| +-.+..+++ .+.+..
T Consensus 112 ~~g~~eeAL~~l~~~i~~~~~~~~lea~~--l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~ 189 (310)
T 3mv2_B 112 ILGDLDKSLETCVEGIDNDEAEGTTELLL--LAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFAT 189 (310)
T ss_dssp HHTCHHHHHHHHHHHHTSSCSTTHHHHHH--HHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHhccCCCcCcHHHHH--HHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHh
Confidence 56888888888888888776 7555544 778888888888888888888888887 233344444 335555
Q ss_pred c--CHHHHHHHHHHHHhcCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc----------CCCcHHHHHH
Q 017383 131 R--RFQEAEDDCTEALNLDDRY--IKAYSRRATARKELGKLKESIEDSEFALRL----------EPQNQEIKKQ 190 (372)
Q Consensus 131 g--~~~eA~~~~~~Al~l~p~~--~~a~~~lg~~~~~lg~~~~A~~~~~~al~l----------~P~~~~~~~~ 190 (372)
| ++.+|...|+++....|+. ...+++ ++..+|++++|...++.++++ +|+++++..+
T Consensus 190 g~~~~q~A~~~f~El~~~~p~~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN 260 (310)
T 3mv2_B 190 NKETATSNFYYYEELSQTFPTWKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLAN 260 (310)
T ss_dssp TCSTTTHHHHHHHHHHTTSCSHHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHhCCCcccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHH
Confidence 6 7888888888887777763 333333 788888888888888877776 4777776533
No 206
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.65 E-value=3e-07 Score=89.38 Aligned_cols=129 Identities=13% Similarity=0.089 Sum_probs=96.6
Q ss_pred CCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhc
Q 017383 53 KPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLR 131 (372)
Q Consensus 53 ~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g 131 (372)
..+|+.| ..|.|++|..+|.++ + .+..+|.++++.|+|++|+++|.++ .++.+|...+.++...|
T Consensus 126 ~~IGd~~~~~g~yeeA~~~Y~~a----~------n~~~LA~~L~~Lg~yq~AVea~~KA----~~~~~Wk~v~~aCv~~~ 191 (449)
T 1b89_A 126 QQVGDRCYDEKMYDAAKLLYNNV----S------NFGRLASTLVHLGEYQAAVDGARKA----NSTRTWKEVCFACVDGK 191 (449)
T ss_dssp -----------CTTTHHHHHHHT----T------CHHHHHHHHHTTTCHHHHHHHHHHH----TCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHh----h------hHHHHHHHHHHhccHHHHHHHHHHc----CCchhHHHHHHHHHHcC
Confidence 5667665 788999999999877 1 2568899999999999999999988 24788888888888999
Q ss_pred CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHH
Q 017383 132 RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (372)
+|+.|..+... |..+|++ ...+...|...|++++|+..+++++.+++.+..++..++.+...|+
T Consensus 192 ef~lA~~~~l~-L~~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 192 EFRLAQMCGLH-IVVHADE---LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp CHHHHHHTTTT-TTTCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHH-HHhCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhcC
Confidence 99999766654 4445544 4467889999999999999999999999999998888877665553
No 207
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.58 E-value=1.4e-07 Score=92.21 Aligned_cols=94 Identities=13% Similarity=0.088 Sum_probs=79.9
Q ss_pred CCCCchhhHHHHHhhhh-----cCCCCch-HHHHHHHHHHHHHhhcHHHHHHHHHHHHcc-----CC---C-HHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLM-----NEESTPD-ATSEKELGNECFKQKKFKEAIDCYSRSIAL-----SP---T-AVAYANRA 124 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~-----~~p~~~~-a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~-----~p---~-~~~~~~la 124 (372)
..|+|++|+..|+++|+ +.|+++. +..+.++|.+|..+|+|++|+.+|+++|++ -| + +..++|+|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 45899999999999997 3455443 567889999999999999999999999986 23 3 78899999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CCCCHHH
Q 017383 125 MAYLKLRRFQEAEDDCTEALNL-----DDRYIKA 153 (372)
Q Consensus 125 ~~~~~~g~~~eA~~~~~~Al~l-----~p~~~~a 153 (372)
.+|..+|+|++|+..|++|+.+ .|+++.+
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 9999999999999999999985 5777654
No 208
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.55 E-value=4.9e-07 Score=74.87 Aligned_cols=98 Identities=9% Similarity=0.016 Sum_probs=84.0
Q ss_pred CCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhh---cHHHHHHHHHHHHccC-C-C-HHHHHHHHHHHHHhcCHHH
Q 017383 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQK---KFKEAIDCYSRSIALS-P-T-AVAYANRAMAYLKLRRFQE 135 (372)
Q Consensus 62 g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g---~~~~Ai~~y~~al~~~-p-~-~~~~~~la~~~~~~g~~~e 135 (372)
.....+...|.+.+..++.+ ..+.+++|.++.+.+ ++++++..++..++.+ | + .++++++|..|+++|+|++
T Consensus 12 ~~l~~~~~~y~~e~~~~~~~--~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~ 89 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSVS--KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEK 89 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCCC--HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHccCCCc--HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHH
Confidence 45566788888888887764 444779999999977 8889999999999999 7 3 8999999999999999999
Q ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 136 AEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 136 A~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
|..+++++|+++|++..+...+..+-
T Consensus 90 A~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 90 ALKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999999999999988876655443
No 209
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.52 E-value=1.4e-06 Score=82.58 Aligned_cols=135 Identities=14% Similarity=0.044 Sum_probs=101.9
Q ss_pred hhhcCCCCchHHHHHHHHHHHHHh---hcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCH-------HHHHH-HHH
Q 017383 74 SLMNEESTPDATSEKELGNECFKQ---KKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRF-------QEAED-DCT 141 (372)
Q Consensus 74 al~~~p~~~~a~~~~~~g~~~~~~---g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~-------~eA~~-~~~ 141 (372)
+....|.+..++-++.+|..++.. ..+.+|+.+|++|++++|+ +.+|..++.||.....+ ..++. .+.
T Consensus 186 ~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~ 265 (372)
T 3ly7_A 186 LQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEID 265 (372)
T ss_dssp HHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHH
Confidence 334567777888888899888765 4568999999999999999 88999899988643221 11111 222
Q ss_pred --HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH----------HHHHHHHHHHHHHHHhhhhhH
Q 017383 142 --EALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK----------KQLAEVKSLYEKEVFQKASKT 209 (372)
Q Consensus 142 --~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~----------~~l~~a~~~~~~~~~~~~~~~ 209 (372)
.++.++|..+.+|..+|.++...|++++|+..+++|+.++|+. .++ ++..+|...|.+++..+|...
T Consensus 266 a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s~-~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~ 344 (372)
T 3ly7_A 266 NIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSW-LNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN 344 (372)
T ss_dssp HHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH
T ss_pred HHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC
Confidence 2346789999999999999999999999999999999999864 332 556677777777777776554
No 210
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.52 E-value=2.9e-07 Score=89.95 Aligned_cols=105 Identities=9% Similarity=0.024 Sum_probs=85.3
Q ss_pred CCCCchhhHHHHHhhhhcC-----CCCc-hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC-----CC----HHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNE-----ESTP-DATSEKELGNECFKQKKFKEAIDCYSRSIALS-----PT----AVAYANRA 124 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~-----p~~~-~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~-----p~----~~~~~~la 124 (372)
..|+|++|+..|+++|++. |.++ .+..+.++|.+|..+|+|++|+.+|+++|.+. |+ +..++++|
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa 378 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVG 378 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHH
Confidence 5689999999999999753 3333 35568899999999999999999999999862 33 78899999
Q ss_pred HHHHHhcCHHHHHHHHHHHHhc-----CCCCH---HHHHHHHHHHHHc
Q 017383 125 MAYLKLRRFQEAEDDCTEALNL-----DDRYI---KAYSRRATARKEL 164 (372)
Q Consensus 125 ~~~~~~g~~~eA~~~~~~Al~l-----~p~~~---~a~~~lg~~~~~l 164 (372)
.+|..+|++++|+..+++|+.+ .|+++ .++.+++.++..+
T Consensus 379 ~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 379 KLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 9999999999999999999975 56664 4455666666543
No 211
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.48 E-value=1.6e-06 Score=79.12 Aligned_cols=86 Identities=15% Similarity=0.084 Sum_probs=79.7
Q ss_pred cHHHHHHHHHHHHccCCC---HHHHHHHHHHHHHh-----cCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH-cCCHH
Q 017383 99 KFKEAIDCYSRSIALSPT---AVAYANRAMAYLKL-----RRFQEAEDDCTEALNLDDRY-IKAYSRRATARKE-LGKLK 168 (372)
Q Consensus 99 ~~~~Ai~~y~~al~~~p~---~~~~~~la~~~~~~-----g~~~eA~~~~~~Al~l~p~~-~~a~~~lg~~~~~-lg~~~ 168 (372)
....|...+++++++||+ ..+|..+|..|... |+.++|..+|++|++++|+. ..+++..|..+.. .|+++
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 468899999999999999 77999999999996 99999999999999999975 9999999999988 59999
Q ss_pred HHHHHHHHHHccCCCc
Q 017383 169 ESIEDSEFALRLEPQN 184 (372)
Q Consensus 169 ~A~~~~~~al~l~P~~ 184 (372)
+|...+++++...|..
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999988763
No 212
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.40 E-value=5e-06 Score=66.43 Aligned_cols=102 Identities=13% Similarity=0.033 Sum_probs=85.2
Q ss_pred HHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHH---HHHHHHHHHhcC-C-CCHHHHHHHHHHHHHcCCHH
Q 017383 95 FKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQE---AEDDCTEALNLD-D-RYIKAYSRRATARKELGKLK 168 (372)
Q Consensus 95 ~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~e---A~~~~~~Al~l~-p-~~~~a~~~lg~~~~~lg~~~ 168 (372)
........+...|.+.+..++. ..+.+++|.++.+.++... ++..++..+.-+ | ..-+++|.+|..++.+|+|+
T Consensus 12 ~~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~ 91 (126)
T 1nzn_A 12 VSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYE 91 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHH
Confidence 3455666777888888776654 9999999999999887776 999999998877 5 56889999999999999999
Q ss_pred HHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 169 ESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 169 ~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
+|..+++.+|+++|+|.++......+..
T Consensus 92 ~A~~~~~~lL~~eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 92 KALKYVRGLLQTEPQNNQAKELERLIDK 119 (126)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 9999999999999999998765544433
No 213
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.39 E-value=2.5e-06 Score=92.54 Aligned_cols=141 Identities=8% Similarity=0.097 Sum_probs=90.7
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCC-CCCCchhhHHHHHhhhhcCCCCchHHH
Q 017383 8 QALDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-SYSRNYDPVSHISSSLMNEESTPDATS 86 (372)
Q Consensus 8 n~~~l~~~~~~l~~~e~~ik~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y-~~g~~~~A~~~~~~al~~~p~~~~a~~ 86 (372)
+.+.+.-++..+++|+++++-+++.- .. ..+...|.++ ..|++.+|+..|.++ +++++
T Consensus 1078 ~~~A~~VLie~i~nldrAiE~Aervn------~p--------~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~sa-- 1136 (1630)
T 1xi4_A 1078 NTSAVQVLIEHIGNLDRAYEFAERCN------EP--------AVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSS-- 1136 (1630)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhcC------CH--------HHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHH--
Confidence 33445555566666666665544210 00 0012333344 678899999999776 33334
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHccCCCH----------------------------HHHHHHHHHHHHhcCHHHHHH
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIALSPTA----------------------------VAYANRAMAYLKLRRFQEAED 138 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~----------------------------~~~~~la~~~~~~g~~~eA~~ 138 (372)
+...|.++.+.|+|++|+++|..|.+..+.+ ..+.++|.++...|+|++|+.
T Consensus 1137 y~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~ 1216 (1630)
T 1xi4_A 1137 YMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKL 1216 (1630)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHH
Confidence 6688999999999999999998888665331 234456666666666666666
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 017383 139 DCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 177 (372)
Q Consensus 139 ~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~a 177 (372)
+|.+| ..|.++|.++..+|++++|++.+++|
T Consensus 1217 ~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA 1247 (1630)
T 1xi4_A 1217 LYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 1247 (1630)
T ss_pred HHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 66664 36677777777777777777777777
No 214
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.37 E-value=1.6e-06 Score=65.89 Aligned_cols=71 Identities=21% Similarity=0.135 Sum_probs=62.6
Q ss_pred CCCCchHHHHHHHHHHHHHhhc---HHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 017383 78 EESTPDATSEKELGNECFKQKK---FKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY 150 (372)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~---~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~ 150 (372)
+|.+++. +..+|.+++..++ .++|...++++++++|+ ..+++.+|..++..|+|++|+..+++++..+|..
T Consensus 2 ~p~~~~~--~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQ--LAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHH--HHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHH--HHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 4554444 6688999876665 79999999999999999 9999999999999999999999999999999984
No 215
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.27 E-value=9e-06 Score=66.15 Aligned_cols=90 Identities=16% Similarity=0.055 Sum_probs=78.1
Q ss_pred hhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH----cCCHHHHH
Q 017383 97 QKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE----LGKLKESI 171 (372)
Q Consensus 97 ~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~----lg~~~~A~ 171 (372)
.+++++|+.+|+++.+.... +. +|.+|...+.+++|+.+|++|.+. .++.+++++|.+|.. .+++++|+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~ 81 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEMFGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 81 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTHH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCHhhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 47899999999999988643 43 999999999999999999999987 789999999999999 89999999
Q ss_pred HHHHHHHccCCCcHHHHHHHHHH
Q 017383 172 EDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 172 ~~~~~al~l~P~~~~~~~~l~~a 194 (372)
.+|+++... +++.+...|..+
T Consensus 82 ~~~~~Aa~~--g~~~a~~~Lg~~ 102 (138)
T 1klx_A 82 QYYSKACGL--NDQDGCLILGYK 102 (138)
T ss_dssp HHHHHHHHT--TCHHHHHHHHHH
T ss_pred HHHHHHHcC--CCHHHHHHHHHH
Confidence 999999987 566666555544
No 216
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.25 E-value=3.2e-07 Score=89.18 Aligned_cols=77 Identities=16% Similarity=0.260 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~ 166 (372)
+..+|..|+..|+|++|+.+|.++ ..|..+|.|+.++|+|++|++.+.+| +++.+|...+.++...|+
T Consensus 125 ~~~IGd~~~~~g~yeeA~~~Y~~a-------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~e 192 (449)
T 1b89_A 125 IQQVGDRCYDEKMYDAAKLLYNNV-------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKE 192 (449)
T ss_dssp ------------CTTTHHHHHHHT-------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHh-------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCc
Confidence 344444444455555555544443 23444455555555555555555544 234444444455555555
Q ss_pred HHHHHHHHH
Q 017383 167 LKESIEDSE 175 (372)
Q Consensus 167 ~~~A~~~~~ 175 (372)
++.|..+..
T Consensus 193 f~lA~~~~l 201 (449)
T 1b89_A 193 FRLAQMCGL 201 (449)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHH
Confidence 555544433
No 217
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.10 E-value=6.1e-06 Score=75.40 Aligned_cols=91 Identities=11% Similarity=-0.045 Sum_probs=81.3
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHh-----hcHHHHHHHHHHHHccCCC--HHHHHHHHHHHHH-hc
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQ-----KKFKEAIDCYSRSIALSPT--AVAYANRAMAYLK-LR 131 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~-----g~~~~Ai~~y~~al~~~p~--~~~~~~la~~~~~-~g 131 (372)
..+....|...++++++++|+..+..+|..+|..|... |+.++|..+|++||+++|+ ..+++..|..++. +|
T Consensus 175 Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~g 254 (301)
T 3u64_A 175 LPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLN 254 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTT
T ss_pred HHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcC
Confidence 44677889999999999999966666677999999984 9999999999999999996 8999999999988 59
Q ss_pred CHHHHHHHHHHHHhcCCCC
Q 017383 132 RFQEAEDDCTEALNLDDRY 150 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l~p~~ 150 (372)
++++|...+++|+..+|..
T Consensus 255 d~~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 255 NRAGFDEALDRALAIDPES 273 (301)
T ss_dssp CHHHHHHHHHHHHHCCGGG
T ss_pred CHHHHHHHHHHHHcCCCCC
Confidence 9999999999999998874
No 218
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.94 E-value=0.00016 Score=57.86 Aligned_cols=83 Identities=12% Similarity=0.044 Sum_probs=68.2
Q ss_pred CCCHHHHHHHHHHHHHhcCH---HHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHH
Q 017383 114 SPTAVAYANRAMAYLKLRRF---QEAEDDCTEALNLDDR-YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK 189 (372)
Q Consensus 114 ~p~~~~~~~la~~~~~~g~~---~eA~~~~~~Al~l~p~-~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~ 189 (372)
.|...+.+++|.|+.+..+. .+++..++..++.+|. .-+.++.+|..++.+|+|++|..+.+.+|+++|+|.++..
T Consensus 37 ~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~ 116 (134)
T 3o48_A 37 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 116 (134)
T ss_dssp GSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred CCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHH
Confidence 34588888899888887754 4688999999888884 5888999999999999999999999999999999988875
Q ss_pred HHHHHHH
Q 017383 190 QLAEVKS 196 (372)
Q Consensus 190 ~l~~a~~ 196 (372)
....+..
T Consensus 117 Lk~~Ie~ 123 (134)
T 3o48_A 117 LKSMVED 123 (134)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5444433
No 219
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.94 E-value=6.9e-05 Score=77.17 Aligned_cols=112 Identities=14% Similarity=0.021 Sum_probs=62.0
Q ss_pred hHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHH-HHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017383 67 PVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAI-DCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEAL 144 (372)
Q Consensus 67 A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai-~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al 144 (372)
....|+++|...|..++. |...+..+...|+.++|+ ..|.+|+...|. ..+|...+......|+++.|...|++++
T Consensus 328 v~~~Ye~aL~~~p~~~~l--W~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l 405 (679)
T 4e6h_A 328 MTYVYMQAAQHVCFAPEI--WFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCI 405 (679)
T ss_dssp HHHHHHHHHHHTTTCHHH--HHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHH--HHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 345566666666654333 345555555556655665 666666666665 5555556666666666666666666665
Q ss_pred hc-----------CCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 145 NL-----------DDR-----------YIKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 145 ~l-----------~p~-----------~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
.. .|. ...+|...+......|..+.|...|.+|++.
T Consensus 406 ~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 406 DRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 43 131 2334555555555555555555555555544
No 220
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.87 E-value=0.00034 Score=56.76 Aligned_cols=81 Identities=12% Similarity=0.038 Sum_probs=68.1
Q ss_pred CCCHHHHHHHHHHHHHhcCH---HHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHH
Q 017383 114 SPTAVAYANRAMAYLKLRRF---QEAEDDCTEALNLDDR-YIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKK 189 (372)
Q Consensus 114 ~p~~~~~~~la~~~~~~g~~---~eA~~~~~~Al~l~p~-~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~ 189 (372)
.|...+.+++|.|+.+..+. .+++..++..+...|. .-+.+|.+|..++.+|+|++|..+.+.+|+++|+|.++..
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~ 115 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGA 115 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHH
Confidence 35588889999999888754 4688999999988884 5788999999999999999999999999999999988865
Q ss_pred HHHHH
Q 017383 190 QLAEV 194 (372)
Q Consensus 190 ~l~~a 194 (372)
....+
T Consensus 116 Lk~~I 120 (144)
T 1y8m_A 116 LKSMV 120 (144)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44433
No 221
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.84 E-value=0.00012 Score=58.38 Aligned_cols=94 Identities=9% Similarity=-0.009 Sum_probs=76.5
Q ss_pred hhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHH---HHHHHHHHHccC-CC--HHHHHHHHHHHHHhcCHHHHHHH
Q 017383 66 DPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKE---AIDCYSRSIALS-PT--AVAYANRAMAYLKLRRFQEAEDD 139 (372)
Q Consensus 66 ~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~---Ai~~y~~al~~~-p~--~~~~~~la~~~~~~g~~~eA~~~ 139 (372)
.+...|.+.+..++...++ .+++|+++.+.++-.+ +|..++..+..+ |. -..++.+|..++++|+|.+|..+
T Consensus 19 ~~~~~y~~e~~~~~~s~~~--~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~ 96 (126)
T 1nzn_A 19 KFEKKFQSEKAAGSVSKST--QFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKY 96 (126)
T ss_dssp HHHHHHHHHHHHSCCCHHH--HHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHhccCCCcHHH--HHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 4456777777766554444 6688999988776655 999999999987 63 88899999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHH
Q 017383 140 CTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 140 ~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
++..|+..|++..+......+-
T Consensus 97 ~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 97 VRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999988876665443
No 222
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.78 E-value=0.00014 Score=74.98 Aligned_cols=145 Identities=13% Similarity=0.092 Sum_probs=115.5
Q ss_pred CCCCchhhH-HHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC-----------C-----------C
Q 017383 60 SYSRNYDPV-SHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS-----------P-----------T 116 (372)
Q Consensus 60 ~~g~~~~A~-~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~-----------p-----------~ 116 (372)
..|+.++|. ..|.+++...|... ..+...+......|+++.|...|++++... | .
T Consensus 355 ~~~~~~~a~r~il~rAi~~~P~s~--~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~ 432 (679)
T 4e6h_A 355 EKNTDSTVITKYLKLGQQCIPNSA--VLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSK 432 (679)
T ss_dssp HHSCCTTHHHHHHHHHHHHCTTCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHhCCCCH--HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccc
Confidence 457888997 99999999999743 446678888899999999999999999752 4 1
Q ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHccCCCcHHHHHH---
Q 017383 117 -AVAYANRAMAYLKLRRFQEAEDDCTEALNL-DDRYIKAYSRRATARKELGK-LKESIEDSEFALRLEPQNQEIKKQ--- 190 (372)
Q Consensus 117 -~~~~~~la~~~~~~g~~~eA~~~~~~Al~l-~p~~~~a~~~lg~~~~~lg~-~~~A~~~~~~al~l~P~~~~~~~~--- 190 (372)
..+|...+......|..+.|...|.+|++. .+.....|...|.+....|+ ++.|...|+.+++..|+++..+..
T Consensus 433 ~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~ 512 (679)
T 4e6h_A 433 LTYVYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLD 512 (679)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHH
Confidence 446788888888889999999999999998 55557778777877777655 999999999999999999888733
Q ss_pred -------HHHHHHHHHHHHHhhh
Q 017383 191 -------LAEVKSLYEKEVFQKA 206 (372)
Q Consensus 191 -------l~~a~~~~~~~~~~~~ 206 (372)
...|+..|++++...+
T Consensus 513 fe~~~~~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 513 FLIYVNEESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHHHHTCHHHHHHHHHHHTTTSS
T ss_pred HHHhCCCHHHHHHHHHHHHHhcC
Confidence 3455666666665544
No 223
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.40 E-value=0.0005 Score=57.28 Aligned_cols=92 Identities=15% Similarity=0.031 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHhhcHHHHHHHHHHHHccC---CC-------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-------
Q 017383 85 TSEKELGNECFKQKKFKEAIDCYSRSIALS---PT-------AVAYANRAMAYLKLRRFQEAEDDCTEALNLD------- 147 (372)
Q Consensus 85 ~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~---p~-------~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~------- 147 (372)
++++.....++..|.|+.|+-.+..++.+. |+ ..++..+|.+++..|+|..|...|++||.+.
T Consensus 21 ~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 21 MNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 345566666777777777777777765542 22 4466777777777777777777777776542
Q ss_pred ------------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 017383 148 ------------------DRYIKAYSRRATARKELGKLKESIEDSEF 176 (372)
Q Consensus 148 ------------------p~~~~a~~~lg~~~~~lg~~~~A~~~~~~ 176 (372)
+...+..|.++.||..+|++++|+..++.
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 12236889999999999999999998765
No 224
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.40 E-value=0.0023 Score=52.36 Aligned_cols=108 Identities=18% Similarity=0.043 Sum_probs=88.7
Q ss_pred cCCCCchHHHHHHHHHHHHHhhcH------HHHHHHHHHHHccCCC---------HHHHHHHHHHHHHhcCHHHHHHHHH
Q 017383 77 NEESTPDATSEKELGNECFKQKKF------KEAIDCYSRSIALSPT---------AVAYANRAMAYLKLRRFQEAEDDCT 141 (372)
Q Consensus 77 ~~p~~~~a~~~~~~g~~~~~~g~~------~~Ai~~y~~al~~~p~---------~~~~~~la~~~~~~g~~~eA~~~~~ 141 (372)
+.|++++. |.......-+.|+. +.-++.|++|+..-|- ..+|.+.|.. ..+++.++|...|+
T Consensus 8 ~~p~~yd~--W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~ 84 (161)
T 4h7y_A 8 MMANNPED--WLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQ 84 (161)
T ss_dssp --CCSHHH--HHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHH
T ss_pred eCCCCHHH--HHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHH
Confidence 45676666 44666666667887 8889999999987653 5566666744 67799999999999
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHH
Q 017383 142 EALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEI 187 (372)
Q Consensus 142 ~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~ 187 (372)
.|+.+...+++.|...|.--...|+...|...+.+++.+.|...+.
T Consensus 85 ~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 85 MARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 9999988899999999999999999999999999999999987653
No 225
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.38 E-value=0.0022 Score=51.30 Aligned_cols=80 Identities=6% Similarity=0.005 Sum_probs=67.5
Q ss_pred chHHHHHHHHHHHHHhh---cHHHHHHHHHHHHccCCC--HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Q 017383 82 PDATSEKELGNECFKQK---KFKEAIDCYSRSIALSPT--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSR 156 (372)
Q Consensus 82 ~~a~~~~~~g~~~~~~g---~~~~Ai~~y~~al~~~p~--~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~ 156 (372)
+...+.+++|.++.+.. +...+|..++..+..+|. -+.++.+|..++++|+|.+|..+++..|+..|++..|...
T Consensus 38 vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~L 117 (134)
T 3o48_A 38 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 117 (134)
T ss_dssp SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHH
T ss_pred CChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHH
Confidence 34556778888887654 556799999999998885 8899999999999999999999999999999999888766
Q ss_pred HHHHH
Q 017383 157 RATAR 161 (372)
Q Consensus 157 lg~~~ 161 (372)
...+-
T Consensus 118 k~~Ie 122 (134)
T 3o48_A 118 KSMVE 122 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 226
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.32 E-value=0.0045 Score=50.12 Aligned_cols=79 Identities=6% Similarity=0.004 Sum_probs=67.1
Q ss_pred chHHHHHHHHHHHHHhh---cHHHHHHHHHHHHccCCC--HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Q 017383 82 PDATSEKELGNECFKQK---KFKEAIDCYSRSIALSPT--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSR 156 (372)
Q Consensus 82 ~~a~~~~~~g~~~~~~g---~~~~Ai~~y~~al~~~p~--~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~ 156 (372)
+...+.+++|.++.+.. +..++|..++..+...|. -+.++.+|..++++|+|.+|..+++..|+..|++..+...
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~L 116 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGAL 116 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 45555778898888765 456799999999998885 8889999999999999999999999999999999887665
Q ss_pred HHHH
Q 017383 157 RATA 160 (372)
Q Consensus 157 lg~~ 160 (372)
...+
T Consensus 117 k~~I 120 (144)
T 1y8m_A 117 KSMV 120 (144)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 227
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.17 E-value=0.0005 Score=57.27 Aligned_cols=102 Identities=14% Similarity=0.037 Sum_probs=76.0
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCc-------hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCC---C------------
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTP-------DATSEKELGNECFKQKKFKEAIDCYSRSIALSP---T------------ 116 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~-------~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p---~------------ 116 (372)
++.|.|+.|+-....++.+..+++ .+..+..+|..+|..|+|..|...|++||.+.. .
T Consensus 31 ~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~s 110 (167)
T 3ffl_A 31 AAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSA 110 (167)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccC
Confidence 467889999998888766543222 234577899999999999999999999876421 1
Q ss_pred -----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Q 017383 117 -----------AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATAR 161 (372)
Q Consensus 117 -----------~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~ 161 (372)
..+.+.+|.||.++|++++|+..++.. -..-..++....+|..|
T Consensus 111 s~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 111 STPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp ------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred CCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC-CchhcCHHHHHHHHHHh
Confidence 267899999999999999999987653 11224466666666654
No 228
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.04 E-value=0.01 Score=58.84 Aligned_cols=124 Identities=6% Similarity=0.020 Sum_probs=102.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHhcCHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL--SPTAVAYANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~--~p~~~~~~~la~~~~~~g~~~eA~ 137 (372)
..+++++|...|.+..... -.++...|..+-..|.+.|++++|...|.+.... .|+...|..+-.+|.+.|++++|.
T Consensus 82 ~~~~l~~A~~lf~~M~~~G-~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~ 160 (501)
T 4g26_A 82 PNPGLSRGFDIFKQMIVDK-VVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAY 160 (501)
T ss_dssp CCHHHHHHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hcchHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHH
Confidence 4567888999998877654 2345667888999999999999999999987764 578888999999999999999999
Q ss_pred HHHHHHHhcCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc--CCCc
Q 017383 138 DDCTEALNLDD-RYIKAYSRRATARKELGKLKESIEDSEFALRL--EPQN 184 (372)
Q Consensus 138 ~~~~~Al~l~p-~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l--~P~~ 184 (372)
..+.......- -+...|..+-.++...|+.++|...|++.... .|+.
T Consensus 161 ~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~ 210 (501)
T 4g26_A 161 EVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSK 210 (501)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCH
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCH
Confidence 99999887542 25678888999999999999999999987653 4553
No 229
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.99 E-value=0.021 Score=56.43 Aligned_cols=140 Identities=12% Similarity=0.112 Sum_probs=106.6
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHH---------hhcHHHHHHHHHHHHcc--CCCHHHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFK---------QKKFKEAIDCYSRSIAL--SPTAVAYANRAMAYL 128 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~---------~g~~~~Ai~~y~~al~~--~p~~~~~~~la~~~~ 128 (372)
..|++++|+..|++..... -.++...|..+-.+|.. .+.++.|...|.+-... .|+..+|..+-.+|.
T Consensus 38 k~G~~~~A~~lf~~M~~~G-v~pd~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~ 116 (501)
T 4g26_A 38 KKGDVLEALRLYDEARRNG-VQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEATFTNGARLAV 116 (501)
T ss_dssp TSCCHHHHHHHHHHHHHHT-CCCCHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHcC-CCCCHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Confidence 6799999999999988754 22345556555555543 34589999999987664 478889999999999
Q ss_pred HhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc--CCCcHHH---------HHHHHHHHH
Q 017383 129 KLRRFQEAEDDCTEALNLD-DRYIKAYSRRATARKELGKLKESIEDSEFALRL--EPQNQEI---------KKQLAEVKS 196 (372)
Q Consensus 129 ~~g~~~eA~~~~~~Al~l~-p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l--~P~~~~~---------~~~l~~a~~ 196 (372)
+.|++++|+..+.+..... .-+..+|..+-.++...|++++|...|+..... .|+.... .+.+++|..
T Consensus 117 ~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ 196 (501)
T 4g26_A 117 AKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYK 196 (501)
T ss_dssp HHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred hcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHH
Confidence 9999999999999988753 235778888889999999999999999998764 4654332 144555555
Q ss_pred HHHH
Q 017383 197 LYEK 200 (372)
Q Consensus 197 ~~~~ 200 (372)
.+++
T Consensus 197 ll~~ 200 (501)
T 4g26_A 197 TLQR 200 (501)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 230
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.94 E-value=0.019 Score=56.64 Aligned_cols=120 Identities=10% Similarity=-0.108 Sum_probs=84.2
Q ss_pred hhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHH------------------
Q 017383 65 YDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAM------------------ 125 (372)
Q Consensus 65 ~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~------------------ 125 (372)
......|++++...|..+.. |...+..+...|+.+.|...|++|+.. |. ...+...+.
T Consensus 196 ~Rv~~~ye~al~~~p~~~~l--W~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~ 272 (493)
T 2uy1_A 196 SRMHFIHNYILDSFYYAEEV--YFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMG 272 (493)
T ss_dssp HHHHHHHHHHHHHTTTCHHH--HHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHcCCCCHHH--HHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhh
Confidence 44678999999999886444 668898899999999999999999999 87 222222211
Q ss_pred ----------------------HHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHccCC
Q 017383 126 ----------------------AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELG-KLKESIEDSEFALRLEP 182 (372)
Q Consensus 126 ----------------------~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg-~~~~A~~~~~~al~l~P 182 (372)
.....+..+.|...|.+| ...+.....|...|.....+| +.+.|...|+.+++..|
T Consensus 273 ~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~ 351 (493)
T 2uy1_A 273 EAESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHP 351 (493)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCT
T ss_pred ccchhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCC
Confidence 122355677777788888 433334556666666555555 58888888888888777
Q ss_pred CcHHHH
Q 017383 183 QNQEIK 188 (372)
Q Consensus 183 ~~~~~~ 188 (372)
+++..+
T Consensus 352 ~~~~~~ 357 (493)
T 2uy1_A 352 DSTLLK 357 (493)
T ss_dssp TCHHHH
T ss_pred CCHHHH
Confidence 776654
No 231
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.59 E-value=0.0079 Score=62.19 Aligned_cols=111 Identities=6% Similarity=-0.045 Sum_probs=79.4
Q ss_pred chhhHHHHHhhhhcCCCCchHHHHHHHHHHH--HH-hhcHHHHHHHHHHHHcc--------CCC-----------HHHHH
Q 017383 64 NYDPVSHISSSLMNEESTPDATSEKELGNEC--FK-QKKFKEAIDCYSRSIAL--------SPT-----------AVAYA 121 (372)
Q Consensus 64 ~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~--~~-~g~~~~Ai~~y~~al~~--------~p~-----------~~~~~ 121 (372)
++.|+..+++....+|... .++..+.+. .. ..+=-+|+....++++. .+. ..++.
T Consensus 265 ~~~a~~~le~L~~~~p~~~---~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~ 341 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHD---IYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLN 341 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGH---HHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchh---HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHH
Confidence 4668888888888877532 222222221 11 23344577777666631 111 23445
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 017383 122 NRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 177 (372)
Q Consensus 122 ~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~a 177 (372)
.-+.-++..|+|+-|+....+|+...|....+|+.|+.+|..+|+|+.|+-.+..+
T Consensus 342 ~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 342 IQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 55777778999999999999999999999999999999999999999999877665
No 232
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.45 E-value=0.072 Score=52.43 Aligned_cols=115 Identities=4% Similarity=-0.130 Sum_probs=90.7
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHH--------------------------------------HHHHHHHHHHhhcHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATS--------------------------------------EKELGNECFKQKKFK 101 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~--------------------------------------~~~~g~~~~~~g~~~ 101 (372)
..|+.+.|...|++++.. |.....+. |...+..+.+.++.+
T Consensus 225 ~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~ 303 (493)
T 2uy1_A 225 GIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLE 303 (493)
T ss_dssp HTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHH
Confidence 568899999999999999 87643221 112222233577889
Q ss_pred HHHHHHHHHHccCCC--HHHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 017383 102 EAIDCYSRSIALSPT--AVAYANRAMAYLKLR-RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 177 (372)
Q Consensus 102 ~Ai~~y~~al~~~p~--~~~~~~la~~~~~~g-~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~a 177 (372)
.|...|.+| . .|. ..+|...|..-+..+ +++.|...|+.+++..|+.+..+...+.....+|+.+.|...|+++
T Consensus 304 ~AR~i~~~A-~-~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 304 LFRKLFIEL-G-NEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp HHHHHHHHH-T-TSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred HHHHHHHHh-h-CCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999999999 3 444 667777777777667 5999999999999999999988888888888999999999999998
No 233
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=96.00 E-value=0.1 Score=49.69 Aligned_cols=91 Identities=11% Similarity=-0.006 Sum_probs=75.2
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccCCC-----------------------HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-----------------------AVAYANRAMAYLKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~p~-----------------------~~~~~~la~~~~~~g~~~eA~~~~~~Al~ 145 (372)
..|......|+.+.|+..+.+|+.+... ..+...++.+++..|++.+|+..+..++.
T Consensus 120 ~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~ 199 (388)
T 2ff4_A 120 TAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTF 199 (388)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3444455678889999999999987422 12334467788999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 017383 146 LDDRYIKAYSRRATARKELGKLKESIEDSEFALR 179 (372)
Q Consensus 146 l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~ 179 (372)
.+|-+-.+|..+-.++...|+..+|+..|+++..
T Consensus 200 ~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 200 EHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988754
No 234
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.37 E-value=0.089 Score=51.85 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q 017383 86 SEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKE 163 (372)
Q Consensus 86 ~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~ 163 (372)
.+..+|........+..|..+|.+|+.+.|+ ...|+.+|.+....|+.-+|+-+|.+++.-..-++.+..++...+..
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 3556788887788888999999999999998 88899999999889999999999999988877788888888877664
No 235
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=95.37 E-value=0.089 Score=51.84 Aligned_cols=78 Identities=13% Similarity=-0.020 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Q 017383 119 AYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKS 196 (372)
Q Consensus 119 ~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~ 196 (372)
.+..+|........+..|..+|.+|+.+.|++..+|+.+|.+....|+.-+|+-+|-+++......+.+..++.....
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~ 231 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHH
Confidence 456678888888889999999999999999999999999999999999999999999999888778888877766544
No 236
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.34 E-value=0.05 Score=52.62 Aligned_cols=97 Identities=8% Similarity=-0.103 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHccCCC----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--CCC----HHHHH
Q 017383 86 SEKELGNECFKQKKFKEAIDCYSRSIALSPT----AVAYANRAMAYLKLRRFQEAEDDCTEALNLD--DRY----IKAYS 155 (372)
Q Consensus 86 ~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~----~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~--p~~----~~a~~ 155 (372)
++..+|..|++.|++++|+++|.++...... ...+.....+++..++|..+...+.++..+- ..+ .....
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 4669999999999999999999999876433 8888889999999999999999999997652 222 23345
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHccCC
Q 017383 156 RRATARKELGKLKESIEDSEFALRLEP 182 (372)
Q Consensus 156 ~lg~~~~~lg~~~~A~~~~~~al~l~P 182 (372)
..|.++...++|..|...|-.++.-..
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e~~~t~~ 239 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVDSLATFT 239 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhChHHHHHHHHHHHhccCC
Confidence 567888899999999999988876543
No 237
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=95.11 E-value=0.75 Score=38.34 Aligned_cols=96 Identities=13% Similarity=0.042 Sum_probs=76.2
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----------------CCCCH
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNL-----------------DDRYI 151 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g~~~eA~~~~~~Al~l-----------------~p~~~ 151 (372)
.++..++-.|+|..|+-.+.. + ......+--+.||.++++|..|+.+++..+.- ||.+-
T Consensus 38 L~~I~LyyngEY~R~Lf~L~~---l-NT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~Dk 113 (242)
T 3kae_A 38 LMSIVLYLNGEYTRALFHLHK---L-NTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDE 113 (242)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT---C-CBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCH
T ss_pred hhhhhhhhcchHhHHHHHHHh---c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchH
Confidence 678899999999998876532 1 22666677889999999999999999999932 24444
Q ss_pred HH-HHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH
Q 017383 152 KA-YSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 152 ~a-~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
+- +..+|.++...|+.++|+.+|.......|-.+.+.
T Consensus 114 EfFy~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf~~vE 151 (242)
T 3kae_A 114 EFFESLLGDLCTLSGYREEGIGHYVRSFGKSFLFSPVE 151 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHhhhHhhhhcCCccccchHH
Confidence 44 44579999999999999999999999998765543
No 238
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=94.72 E-value=0.12 Score=53.50 Aligned_cols=58 Identities=14% Similarity=0.062 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017383 86 SEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEA 143 (372)
Q Consensus 86 ~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~A 143 (372)
.+...+..+...|+|+-|+.+..+|+.+.|. ...|+.|+.||..+|+|+.|+-.++.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 4556678888999999999999999999999 999999999999999999999776654
No 239
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.36 E-value=0.27 Score=46.91 Aligned_cols=91 Identities=12% Similarity=-0.005 Sum_probs=74.7
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHcc----CCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC---CCC----HHHH
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIAL----SPT---AVAYANRAMAYLKLRRFQEAEDDCTEALNLD---DRY----IKAY 154 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~----~p~---~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~---p~~----~~a~ 154 (372)
.+|..|+..|+|.+|+..+.+.+.- +.. ..++..-..+|..++++.++...+++|.... +.+ +...
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 7899999999999999999988873 222 7788888999999999999999999987653 122 3334
Q ss_pred HHHHHHHH-HcCCHHHHHHHHHHHHc
Q 017383 155 SRRATARK-ELGKLKESIEDSEFALR 179 (372)
Q Consensus 155 ~~lg~~~~-~lg~~~~A~~~~~~al~ 179 (372)
..-|..+. ..|+|..|..+|-.++.
T Consensus 184 ~~~Gi~~l~~~rdyk~A~~~F~eaf~ 209 (394)
T 3txn_A 184 LQSGILHAADERDFKTAFSYFYEAFE 209 (394)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhccCHHHHHHHHHHHHh
Confidence 55688888 89999999999999874
No 240
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=94.34 E-value=0.44 Score=38.92 Aligned_cols=99 Identities=11% Similarity=-0.006 Sum_probs=75.0
Q ss_pred hhhHHHHHhhhhcCCCCc------hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHH
Q 017383 65 YDPVSHISSSLMNEESTP------DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 65 ~~A~~~~~~al~~~p~~~------~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~ 137 (372)
++-++.|++++..-|... .++.|...|. +...++.++|...|+.|+.+... +.+|...|.--.++|+...|.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 556788999988666532 2334445553 35679999999999999998555 999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHcC
Q 017383 138 DDCTEALNLDDRYIKAYSRRATARKELG 165 (372)
Q Consensus 138 ~~~~~Al~l~p~~~~a~~~lg~~~~~lg 165 (372)
..+.+|+.+.|..... ...+......|
T Consensus 115 kILg~AiG~~~k~~~~-le~a~~nl~~~ 141 (161)
T 4h7y_A 115 QLLQKAVERGAVPLEM-LEIALRNLNLQ 141 (161)
T ss_dssp HHHHHHHHTTCBCHHH-HHHHHHHHHTT
T ss_pred HHHHHHhccCCCcHHH-HHHHHHhhhcC
Confidence 9999999999986553 33444444444
No 241
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=94.25 E-value=0.5 Score=39.66 Aligned_cols=99 Identities=12% Similarity=0.016 Sum_probs=63.1
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcCHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDD 139 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g~~~eA~~~ 139 (372)
..|+++.|.+..... + ....|+.+|......|+++-|..||.++=.. ..+...|.-.|+.+.-...
T Consensus 17 ~lg~l~~A~e~a~~l---~----~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~-------~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 17 EYGNLDAALDEAKKL---N----DSITWERLIQEALAQGNASLAEMIYQTQHSF-------DKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp HTTCHHHHHHHHHHH---C----CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH-------HHHHHHHHHHTCHHHHHHH
T ss_pred hcCCHHHHHHHHHHh---C----CHHHHHHHHHHHHHcCChHHHHHHHHHhCCH-------HHHHHHHHHhCCHHHHHHH
Confidence 567888887776544 2 2334778898888999999998888886432 2344456666666555444
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 017383 140 CTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFA 177 (372)
Q Consensus 140 ~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~a 177 (372)
.+.|...+ + +.....++..+|+++++++.|.+.
T Consensus 83 a~iA~~~g-~----~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 83 QNIAQTRE-D----FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp HHHHHHTT-C----HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHHCc-c----HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 44443322 1 122345677888888888887554
No 242
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=93.83 E-value=2.3 Score=35.45 Aligned_cols=82 Identities=12% Similarity=0.010 Sum_probs=54.4
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHc--c--CCC---------------HHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA--L--SPT---------------AVAY 120 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~--~--~p~---------------~~~~ 120 (372)
-.|+|.+++-++.+. + .+...+-.+.||.+.++|..|+.+.+..+. + +|+ .-.+
T Consensus 45 yngEY~R~Lf~L~~l-----N--T~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy 117 (242)
T 3kae_A 45 LNGEYTRALFHLHKL-----N--TCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFE 117 (242)
T ss_dssp HTTCHHHHHHHHHTC-----C--BHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHH
T ss_pred hcchHhHHHHHHHhc-----c--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHH
Confidence 456666655544321 1 333455667788888888888888888882 2 232 2345
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCC
Q 017383 121 ANRAMAYLKLRRFQEAEDDCTEALNLDD 148 (372)
Q Consensus 121 ~~la~~~~~~g~~~eA~~~~~~Al~l~p 148 (372)
..+|..+...|+-++|+.++......+|
T Consensus 118 ~l~a~lltq~g~r~EaI~y~~~Sf~~~~ 145 (242)
T 3kae_A 118 SLLGDLCTLSGYREEGIGHYVRSFGKSF 145 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhcCHHHhhhHhhhhcCCcc
Confidence 6678888888888888888887766554
No 243
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.56 E-value=0.23 Score=51.01 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=32.4
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSI 111 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al 111 (372)
..|+++.|.+.+... + ....|..+|..+...|+++.|+.||.++-
T Consensus 664 ~~~~~~~A~~~~~~~---~----~~~~W~~la~~al~~~~~~~A~~~y~~~~ 708 (814)
T 3mkq_A 664 KVGQLTLARDLLTDE---S----AEMKWRALGDASLQRFNFKLAIEAFTNAH 708 (814)
T ss_dssp HHTCHHHHHHHHTTC---C----CHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred hcCCHHHHHHHHHhh---C----cHhHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 457777777764332 2 23457788999999999999999998863
No 244
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.53 E-value=0.39 Score=43.08 Aligned_cols=62 Identities=16% Similarity=0.029 Sum_probs=42.8
Q ss_pred HHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHH
Q 017383 127 YLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIK 188 (372)
Q Consensus 127 ~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~ 188 (372)
+++.|+..+|+..+...++-+|.++.....+-..+.-.|+++.|..-++.+.+++|.....-
T Consensus 7 ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a 68 (273)
T 1zbp_A 7 ALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGA 68 (273)
T ss_dssp HTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHH
Confidence 45666677777777777777777777777777777777777777777777777777664443
No 245
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.30 E-value=0.17 Score=49.83 Aligned_cols=126 Identities=10% Similarity=-0.075 Sum_probs=60.9
Q ss_pred CCCCchhhHHHHHhhhh---cCCCC------chHHHHHHHHHHHHHhhcHHHHHH----------HHHHHH-----ccCC
Q 017383 60 SYSRNYDPVSHISSSLM---NEEST------PDATSEKELGNECFKQKKFKEAID----------CYSRSI-----ALSP 115 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~---~~p~~------~~a~~~~~~g~~~~~~g~~~~Ai~----------~y~~al-----~~~p 115 (372)
+.+++++|..+....+. +...+ -.+..|+..+.++-..|+...... .+-.++ ..|+
T Consensus 148 d~k~~~~~~~~~~~~~~~~~l~~~nrrtlD~l~ak~~fY~s~~~e~~~~~~~~~~~~~~~~~ir~~Ll~~~rta~lr~D~ 227 (523)
T 4b4t_S 148 DSKELEQLVEFNRKVVIPNLLCYYNLRSLNLINAKLWFYIYLSHETLARSSEEINSDNQNIILRSTMMKFLKIASLKHDN 227 (523)
T ss_dssp -------------------------------------------------------CHHHHHHHHTHHHHHHHHCCSCSSS
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHhcccCc
Confidence 67788888887766552 11110 123345555555555665544211 122222 3345
Q ss_pred C--HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC--CC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcH
Q 017383 116 T--AVAYANRAMAYLKLRRFQEAEDDCTEALNLDD--RY---IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQ 185 (372)
Q Consensus 116 ~--~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p--~~---~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~ 185 (372)
. +.+++.+=..|+..+.|+.|.....++.-... .+ +..+|.+|.++...++|.+|..+|..|++..|.+.
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~ 304 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNS 304 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcch
Confidence 4 77788888899999999999999999853211 11 45577899999999999999999999999988653
No 246
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=93.17 E-value=1.1 Score=40.22 Aligned_cols=116 Identities=11% Similarity=-0.004 Sum_probs=68.8
Q ss_pred CCCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC--HHHHHHHHHHHHHhcCHHHH
Q 017383 59 NSYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT--AVAYANRAMAYLKLRRFQEA 136 (372)
Q Consensus 59 y~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~--~~~~~~la~~~~~~g~~~eA 136 (372)
+..|++++|+......++.+|.+..... .+-..+.-.|+|+.|...++-+.+++|. ..+...+..+. |
T Consensus 8 l~~g~L~~al~~~~~~VR~~P~da~~R~--~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~--------a 77 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIKASPKDASLRS--SFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVK--------A 77 (273)
T ss_dssp TTTTCHHHHHHHHHHHHHTCTTCHHHHH--HHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH--------H
T ss_pred HhCCCHHHHHHHHHHHHHhCCcCHHHHH--HHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHH--------H
Confidence 4667888888888888888888666554 5667777788888888888888888887 22111111111 1
Q ss_pred HHHHHHHHhc--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 137 EDDCTEALNL--------DDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 137 ~~~~~~Al~l--------~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
+..=...+.- .|.........+......|+.++|...-.+++...|..
T Consensus 78 E~~R~~vfaG~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~ 133 (273)
T 1zbp_A 78 AQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 133 (273)
T ss_dssp HHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCccc
Confidence 1111111111 11122233344555666678888877777777776643
No 247
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=92.89 E-value=0.56 Score=44.48 Aligned_cols=84 Identities=12% Similarity=0.030 Sum_probs=65.7
Q ss_pred CCchhhHHHHHhhhhcCCCC--c------h--H----------HHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHH
Q 017383 62 SRNYDPVSHISSSLMNEEST--P------D--A----------TSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAY 120 (372)
Q Consensus 62 g~~~~A~~~~~~al~~~p~~--~------~--a----------~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~ 120 (372)
|+.+.|...+.+++.+--.. + . . .+...++..+...|++.+|+..+..++..+|- -.+|
T Consensus 129 ~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~ 208 (388)
T 2ff4_A 129 GRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLW 208 (388)
T ss_dssp TCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 56677778888887743211 0 0 0 12345677788999999999999999999998 7889
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHh
Q 017383 121 ANRAMAYLKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 121 ~~la~~~~~~g~~~eA~~~~~~Al~ 145 (372)
..+-.+|...|+..+|+..|+++..
T Consensus 209 ~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 209 TQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999999999999988644
No 248
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=92.16 E-value=2 Score=45.80 Aligned_cols=96 Identities=8% Similarity=-0.068 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHH-----ccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Q 017383 86 SEKELGNECFKQKKFKEAIDCYSRSI-----ALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLD-DRYIKAYSRRAT 159 (372)
Q Consensus 86 ~~~~~g~~~~~~g~~~~Ai~~y~~al-----~~~p~~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~-p~~~~a~~~lg~ 159 (372)
.+..+-+.|.+.|+.++|...|..-- ...|+...|+.+-..|.+.|++++|...|.+..... .-+..+|..+-.
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 57788889999999999999996633 356889999999999999999999999999987754 235677777777
Q ss_pred HHHHcCC-HHHHHHHHHHHHccC
Q 017383 160 ARKELGK-LKESIEDSEFALRLE 181 (372)
Q Consensus 160 ~~~~lg~-~~~A~~~~~~al~l~ 181 (372)
++...|+ .++|...|++.....
T Consensus 209 glcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHHhCCCcHHHHHHHHHHHHHcC
Confidence 8888898 578889998887643
No 249
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.72 E-value=3.2 Score=39.99 Aligned_cols=98 Identities=12% Similarity=0.026 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHc----cCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHh---cCCCC--
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIA----LSPT---AVAYANRAMAYLKLRRFQEAEDDCTEALN---LDDRY-- 150 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~----~~p~---~~~~~~la~~~~~~g~~~eA~~~~~~Al~---l~p~~-- 150 (372)
.+.....++..|...|+|.+|...+..... .+.. ...+......|+..++|..|...++++.. -.+..
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~ 215 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYES 215 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHH
Confidence 344556889999999999999999988753 2222 67788889999999999999999998742 12222
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 151 --IKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 151 --~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
...+...|..+...++|.+|..+|..++..
T Consensus 216 lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 216 LKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 334566788999999999999999999864
No 250
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=88.98 E-value=3.2 Score=42.34 Aligned_cols=77 Identities=17% Similarity=0.133 Sum_probs=49.0
Q ss_pred HHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc--------CCCCHHHHHHHHHHHHHcC
Q 017383 94 CFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNL--------DDRYIKAYSRRATARKELG 165 (372)
Q Consensus 94 ~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g~~~eA~~~~~~Al~l--------~p~~~~a~~~lg~~~~~lg 165 (372)
....|+++.|.+.... -.+...|.++|..+++.|+++.|+.+|.++-.. ...+.+.+..++......|
T Consensus 662 ~l~~~~~~~A~~~~~~----~~~~~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~ 737 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTD----ESAEMKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTG 737 (814)
T ss_dssp HHHHTCHHHHHHHHTT----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hhhcCCHHHHHHHHHh----hCcHhHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3455666666555321 123788899999999999999999999886221 2344455555565555666
Q ss_pred CHHHHHHHH
Q 017383 166 KLKESIEDS 174 (372)
Q Consensus 166 ~~~~A~~~~ 174 (372)
++..|...|
T Consensus 738 ~~~~A~~~~ 746 (814)
T 3mkq_A 738 KFNLAFNAY 746 (814)
T ss_dssp CHHHHHHHH
T ss_pred chHHHHHHH
Confidence 666665554
No 251
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=88.18 E-value=2 Score=40.76 Aligned_cols=112 Identities=9% Similarity=-0.022 Sum_probs=79.7
Q ss_pred CCCCC-CCCCchhhHHHHHhhhhc----CCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC----CC----HHHHH
Q 017383 55 SPSGN-SYSRNYDPVSHISSSLMN----EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALS----PT----AVAYA 121 (372)
Q Consensus 55 ~~~~y-~~g~~~~A~~~~~~al~~----~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~----p~----~~~~~ 121 (372)
+|..| ..|+|.+|+..+.+.++. +....-...+.....+|...|++.++...|.+|.... +. +.+..
T Consensus 105 L~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~ 184 (394)
T 3txn_A 105 LIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDL 184 (394)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHH
Confidence 33444 889999999998887763 2222223445677888999999999999999986542 33 56667
Q ss_pred HHHHHHH-HhcCHHHHHHHHHHHHhcCC-----CCHHHHHHHHHHHHHcCC
Q 017383 122 NRAMAYL-KLRRFQEAEDDCTEALNLDD-----RYIKAYSRRATARKELGK 166 (372)
Q Consensus 122 ~la~~~~-~~g~~~eA~~~~~~Al~l~p-----~~~~a~~~lg~~~~~lg~ 166 (372)
.-|..++ ..++|..|-.+|-.++.-.. ....+...++.+-...++
T Consensus 185 ~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~~~~~~lkYlvL~aLl~~~ 235 (394)
T 3txn_A 185 QSGILHAADERDFKTAFSYFYEAFEGFDSVDSVKALTSLKYMLLCKIMLGQ 235 (394)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HhhHHHHHhccCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHcCC
Confidence 7799999 89999999999999875322 223344556666666665
No 252
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=86.83 E-value=1.7 Score=47.19 Aligned_cols=26 Identities=23% Similarity=0.247 Sum_probs=16.7
Q ss_pred chhHHHHHHhhhcCC----HHHHHHHHhhc
Q 017383 317 SAYEFEVSWRGFAGD----HALQARLLKAI 342 (372)
Q Consensus 317 ~s~~f~~~~~~~~~~----~~~~~~yl~~i 342 (372)
+-|++-=.||-.++| ...+|+|+.++
T Consensus 1021 ~Yy~iLYs~ri~r~dyR~AA~vmYe~~~RL 1050 (1139)
T 4fhn_B 1021 CWYNILFSWRYKHQNYRDAAAIIYEKLSRY 1050 (1139)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred CHHHHhHhhhhccCChHHHHHHHHHHHHHh
Confidence 557777777777643 45567776654
No 253
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=82.91 E-value=6.4 Score=32.83 Aligned_cols=47 Identities=11% Similarity=0.035 Sum_probs=40.2
Q ss_pred HHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017383 94 CFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEAL 144 (372)
Q Consensus 94 ~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g~~~eA~~~~~~Al 144 (372)
....|+++.|.+..... .+...|..+|...+..|+++-|+.+|.++-
T Consensus 15 AL~lg~l~~A~e~a~~l----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKL----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHHTTCHHHHHHHHHHH----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHhcCCHHHHHHHHHHh----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 46889999999987654 237889999999999999999999999863
No 254
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.38 E-value=7.1 Score=37.29 Aligned_cols=88 Identities=13% Similarity=0.021 Sum_probs=68.8
Q ss_pred CCCCchhhHHHHHhhhhcCCCCc-hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC---CC----HHHHHHHHHHHHHhc
Q 017383 60 SYSRNYDPVSHISSSLMNEESTP-DATSEKELGNECFKQKKFKEAIDCYSRSIALS---PT----AVAYANRAMAYLKLR 131 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~-~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~---p~----~~~~~~la~~~~~~g 131 (372)
..||++.|+..|.++........ ....+...-.+++..++|..+..++.++-.+. ++ .......|..++..+
T Consensus 143 ~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r 222 (429)
T 4b4t_R 143 QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVR 222 (429)
T ss_dssp HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTS
T ss_pred HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 77999999999999887554332 34456677788899999999999999986642 22 445566788889999
Q ss_pred CHHHHHHHHHHHHhcC
Q 017383 132 RFQEAEDDCTEALNLD 147 (372)
Q Consensus 132 ~~~eA~~~~~~Al~l~ 147 (372)
+|..|-..|-.++.-.
T Consensus 223 ~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 223 NFKEAAKLLVDSLATF 238 (429)
T ss_dssp CHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHhccC
Confidence 9999999998887654
No 255
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=81.37 E-value=5.7 Score=40.06 Aligned_cols=86 Identities=12% Similarity=-0.080 Sum_probs=51.1
Q ss_pred HHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 017383 94 CFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIED 173 (372)
Q Consensus 94 ~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~ 173 (372)
++..+...++...+.+......+....-.++...+..|++..|..++.+.-.-........|-+|.++..+|+.++|...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~ 341 (618)
T 1qsa_A 262 LMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEI 341 (618)
T ss_dssp SCSTTCCHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCChHHHHHHHhccccCCChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHH
Confidence 33444345566666665544444222222333344567888877777664443334566777777777778888888777
Q ss_pred HHHHHc
Q 017383 174 SEFALR 179 (372)
Q Consensus 174 ~~~al~ 179 (372)
|+++..
T Consensus 342 ~~~~a~ 347 (618)
T 1qsa_A 342 LHQLMQ 347 (618)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 777764
No 256
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.06 E-value=15 Score=36.01 Aligned_cols=70 Identities=10% Similarity=-0.010 Sum_probs=56.6
Q ss_pred CchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccC---CC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Q 017383 81 TPDATSEKELGNECFKQKKFKEAIDCYSRSIALS---PT---AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRY 150 (372)
Q Consensus 81 ~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~---p~---~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~ 150 (372)
...+..++.+=..|...+.|+.|.....++.--. ++ ...++.+|.++.-.++|.+|..++..|+...|.+
T Consensus 228 ~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 228 ETKAMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp CHHHHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred chhHHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 3566677778888999999999999999985321 12 5556788999999999999999999999987754
No 257
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=79.98 E-value=7.1 Score=41.72 Aligned_cols=87 Identities=9% Similarity=-0.078 Sum_probs=68.6
Q ss_pred CCCCchhhHHHHHhhhhcC--CCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHhcC-HH
Q 017383 60 SYSRNYDPVSHISSSLMNE--ESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL--SPTAVAYANRAMAYLKLRR-FQ 134 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~--p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~--~p~~~~~~~la~~~~~~g~-~~ 134 (372)
..|+.++|...+...-... --.++...|+.+-..|.+.|++++|.+.|.+-.+. .|+...|..+-.++.+.|+ .+
T Consensus 139 K~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~glcK~G~~~e 218 (1134)
T 3spa_A 139 LTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQCMGRQDQDAG 218 (1134)
T ss_dssp HHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCCHH
T ss_pred hCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHhCCCcHH
Confidence 5699999999996643210 01235667889999999999999999999998764 5888889888889999998 47
Q ss_pred HHHHHHHHHHhc
Q 017383 135 EAEDDCTEALNL 146 (372)
Q Consensus 135 eA~~~~~~Al~l 146 (372)
+|...+++....
T Consensus 219 ~A~~Ll~EM~~k 230 (1134)
T 3spa_A 219 TIERCLEQMSQE 230 (1134)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc
Confidence 888888877654
No 258
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=77.38 E-value=1.9 Score=31.44 Aligned_cols=35 Identities=17% Similarity=0.346 Sum_probs=22.7
Q ss_pred CCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHc
Q 017383 78 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA 112 (372)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~ 112 (372)
+|....+..+...|..+-..|+|++|+.+|..+++
T Consensus 10 ~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 10 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGID 44 (86)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 44444555556667667777888888777776654
No 259
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=75.85 E-value=20 Score=25.91 Aligned_cols=29 Identities=7% Similarity=-0.025 Sum_probs=11.9
Q ss_pred HHHHHHccCCCcHHHHHHHHHHHHHHHHH
Q 017383 173 DSEFALRLEPQNQEIKKQLAEVKSLYEKE 201 (372)
Q Consensus 173 ~~~~al~l~P~~~~~~~~l~~a~~~~~~~ 201 (372)
.|..+++..|+...-.....++...+.++
T Consensus 45 ~ll~alk~e~d~~~k~~lr~K~~eYl~RA 73 (86)
T 4a5x_A 45 LLLQVLKGTKDNTKRCNLREKISKYMDRA 73 (86)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHH
Confidence 44444445554332222333444444443
No 260
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=75.00 E-value=3.7 Score=30.17 Aligned_cols=29 Identities=21% Similarity=0.375 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSI 111 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al 111 (372)
.|..+-.++..+.+.|+|++||+|..++.
T Consensus 14 ~AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 14 LAHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 45566678888999999999999966644
No 261
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=73.87 E-value=6.3 Score=27.70 Aligned_cols=29 Identities=24% Similarity=0.472 Sum_probs=25.9
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHccCCC
Q 017383 88 KELGNECFKQKKFKEAIDCYSRSIALSPT 116 (372)
Q Consensus 88 ~~~g~~~~~~g~~~~Ai~~y~~al~~~p~ 116 (372)
..+|..+...|++++|+.+|-+|+...|+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~q 49 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 49 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 46888999999999999999999999888
No 262
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=73.78 E-value=28 Score=31.69 Aligned_cols=27 Identities=7% Similarity=-0.315 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 017383 149 RYIKAYSRRATARKELGKLKESIEDSE 175 (372)
Q Consensus 149 ~~~~a~~~lg~~~~~lg~~~~A~~~~~ 175 (372)
.++..+..+|..+..-|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 468889999999999999999999883
No 263
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=73.24 E-value=17 Score=34.88 Aligned_cols=86 Identities=9% Similarity=-0.011 Sum_probs=66.1
Q ss_pred CCCCchhhHHHHHhhhh----cCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHc----cCCC----HHHHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLM----NEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIA----LSPT----AVAYANRAMAY 127 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~----~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~----~~p~----~~~~~~la~~~ 127 (372)
..|++.+|...+..... ..+.......+......|+..++|..|...+.++.. ..+. ...+...|..+
T Consensus 149 ~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~~~~~~~ 228 (445)
T 4b4t_P 149 EEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYNLLVKIS 228 (445)
T ss_dssp HHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHH
Confidence 67999999998888653 222222345567788899999999999999998642 2222 56677789999
Q ss_pred HHhcCHHHHHHHHHHHHh
Q 017383 128 LKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 128 ~~~g~~~eA~~~~~~Al~ 145 (372)
...++|.+|-.+|..++.
T Consensus 229 ~~e~~y~~a~~~y~e~~~ 246 (445)
T 4b4t_P 229 LHKREYLEVAQYLQEIYQ 246 (445)
T ss_dssp HHHCCHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHh
Confidence 999999999999888875
No 264
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=73.16 E-value=22 Score=32.72 Aligned_cols=26 Identities=12% Similarity=-0.059 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHH
Q 017383 149 RYIKAYSRRATARKELGKLKESIEDS 174 (372)
Q Consensus 149 ~~~~a~~~lg~~~~~lg~~~~A~~~~ 174 (372)
.++..+..+|..+..-|++.+|..+|
T Consensus 134 Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 134 GDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 56788889999999999999999888
No 265
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=71.65 E-value=23 Score=28.44 Aligned_cols=80 Identities=14% Similarity=0.103 Sum_probs=49.3
Q ss_pred hhcHHHHHHHHHHHHccCCCHHHHHHHHH-HHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 017383 97 QKKFKEAIDCYSRSIALSPTAVAYANRAM-AYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSE 175 (372)
Q Consensus 97 ~g~~~~Ai~~y~~al~~~p~~~~~~~la~-~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~ 175 (372)
-|+...-+.||-+.=. ..-|..+|. .+...|+-++-.+.+...+.-.+-++..++.+|.+|..+|+..+|.+.+.
T Consensus 74 C~NlKrVi~C~~~~n~----~se~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~ 149 (172)
T 1wy6_A 74 CQNLKSVVECGVINNT----LNEHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLI 149 (172)
T ss_dssp CSCTHHHHHHHHHTTC----CCHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhcHHHHHHHHHHhcc----hHHHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHH
Confidence 4455555666554211 122444555 33455565555555555455566668888888888888888888888888
Q ss_pred HHHcc
Q 017383 176 FALRL 180 (372)
Q Consensus 176 ~al~l 180 (372)
+|.+-
T Consensus 150 ~AC~k 154 (172)
T 1wy6_A 150 EACKK 154 (172)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 87654
No 266
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=70.87 E-value=12 Score=26.18 Aligned_cols=39 Identities=13% Similarity=0.147 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHH
Q 017383 155 SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAE 193 (372)
Q Consensus 155 ~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~ 193 (372)
..+|..+...|++++|..+|-+|+.+.|.-.+....|++
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~ 59 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQ 59 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 358888999999999999999999999887666655544
No 267
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=68.49 E-value=30 Score=24.77 Aligned_cols=14 Identities=21% Similarity=0.131 Sum_probs=5.8
Q ss_pred HhcCHHHHHHHHHH
Q 017383 129 KLRRFQEAEDDCTE 142 (372)
Q Consensus 129 ~~g~~~eA~~~~~~ 142 (372)
+.|+|.+|+.+|..
T Consensus 31 ~~g~y~eAl~lY~~ 44 (83)
T 2w2u_A 31 KEGNAEEAITNYKK 44 (83)
T ss_dssp HTTCHHHHHHHHHH
T ss_pred HhccHHHHHHHHHH
Confidence 34444444444333
No 268
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=67.67 E-value=27 Score=28.51 Aligned_cols=28 Identities=18% Similarity=0.299 Sum_probs=22.8
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHccCC
Q 017383 88 KELGNECFKQKKFKEAIDCYSRSIALSP 115 (372)
Q Consensus 88 ~~~g~~~~~~g~~~~Ai~~y~~al~~~p 115 (372)
+..|..+|..|+|-+|-+.++.+....+
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~ 63 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYG 63 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcC
Confidence 4667888899999999999998887653
No 269
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=66.72 E-value=40 Score=35.72 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=69.0
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHh-cCC------------------
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDCTEALN-LDD------------------ 148 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~-l~p------------------ 148 (372)
.+...+...|.++-|.+ .+...|. +..-+.+|.+|+..|++++|..+|++|-. +..
T Consensus 815 ~l~~~L~~~~~~~~a~e----L~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~ 890 (950)
T 4gq2_M 815 ELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKY 890 (950)
T ss_dssp HHHHHHHHTTCHHHHHH----HGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHT
T ss_pred HHHHHHHHhcHHHHHHH----HHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcc
Confidence 45667778888876543 4455565 55568899999999999999999998642 110
Q ss_pred --C--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc-CCCcHHH
Q 017383 149 --R--YIKAYSRRATARKELGKLKESIEDSEFALRL-EPQNQEI 187 (372)
Q Consensus 149 --~--~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l-~P~~~~~ 187 (372)
. ....|.....++...|-++-++...+.||.. .++++..
T Consensus 891 e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lAI~~~~~dd~~l 934 (950)
T 4gq2_M 891 HHQNLLSCYYLHLSKKLFEESAYIDALEFSLLADASKETDDEDL 934 (950)
T ss_dssp TTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCSCCHHH
T ss_pred cccchhHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcccCCccc
Confidence 1 1235666788888999999999999999964 4555543
No 270
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=64.90 E-value=35 Score=24.31 Aligned_cols=15 Identities=27% Similarity=0.286 Sum_probs=7.1
Q ss_pred HHHHHHHHHccCCCc
Q 017383 170 SIEDSEFALRLEPQN 184 (372)
Q Consensus 170 A~~~~~~al~l~P~~ 184 (372)
|++.|..+++..|+.
T Consensus 37 aie~l~~~lk~e~d~ 51 (83)
T 2v6y_A 37 AIEVLSQIIVLYPES 51 (83)
T ss_dssp HHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHCCCH
Confidence 334445555555544
No 271
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=64.69 E-value=8.2 Score=27.79 Aligned_cols=28 Identities=21% Similarity=0.192 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHcc
Q 017383 86 SEKELGNECFKQKKFKEAIDCYSRSIAL 113 (372)
Q Consensus 86 ~~~~~g~~~~~~g~~~~Ai~~y~~al~~ 113 (372)
.+...|..+-+.|+|++|+.+|..+++.
T Consensus 21 ~lv~~Ave~D~~g~y~eAl~lY~~aie~ 48 (83)
T 2w2u_A 21 KYAINAVKADKEGNAEEAITNYKKAIEV 48 (83)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3456677777888888888888777653
No 272
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=63.69 E-value=48 Score=35.08 Aligned_cols=77 Identities=9% Similarity=0.015 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHcc---C------------------CC---HHHHHHHHHHHHHhcCHHHHHHHHHH
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIAL---S------------------PT---AVAYANRAMAYLKLRRFQEAEDDCTE 142 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~---~------------------p~---~~~~~~la~~~~~~g~~~eA~~~~~~ 142 (372)
-+.+|.+|...|++++|..+|++|-.- . +. ...|......+...+-++-++..++.
T Consensus 843 ~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~l 922 (950)
T 4gq2_M 843 VYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLL 922 (950)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 478999999999999999999986531 0 01 23667788889999999999999999
Q ss_pred HHhc-CCCCHH----HHHHHHHHHHH
Q 017383 143 ALNL-DDRYIK----AYSRRATARKE 163 (372)
Q Consensus 143 Al~l-~p~~~~----a~~~lg~~~~~ 163 (372)
||.. .+++.. .|+++=.+...
T Consensus 923 AI~~~~~dd~~l~~~l~~r~f~~a~a 948 (950)
T 4gq2_M 923 ADASKETDDEDLSIAITHETLKTACA 948 (950)
T ss_dssp HHHTCCSCCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcccCCccchHHHHHHHHHHHhh
Confidence 9975 444433 44444444333
No 273
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=62.81 E-value=11 Score=27.67 Aligned_cols=28 Identities=25% Similarity=0.189 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEAL 144 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al 144 (372)
+..+-.++..+++.|+|++||++.++|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4556677888888888888888877653
No 274
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=62.08 E-value=19 Score=26.44 Aligned_cols=55 Identities=11% Similarity=-0.014 Sum_probs=36.3
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccCCC-----HHHHHH--HHHHHHHhcCHHHHHHHHHHHHh
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALSPT-----AVAYAN--RAMAYLKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~p~-----~~~~~~--la~~~~~~g~~~eA~~~~~~Al~ 145 (372)
..|..+|..|+|-+|-+.++..-...|. ...+.. -|..+...|+. |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 4577788889999998888888777654 222223 34444455666 6677777655
No 275
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=61.31 E-value=10 Score=27.22 Aligned_cols=26 Identities=27% Similarity=0.339 Sum_probs=16.6
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHc
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIA 112 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~ 112 (372)
+...|..+-+.|+|++|+.+|..+++
T Consensus 14 lv~~Ave~D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 14 YAILAVKADKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 44555666667777777777666554
No 276
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=60.59 E-value=10 Score=28.03 Aligned_cols=29 Identities=24% Similarity=0.472 Sum_probs=26.2
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHccCCC
Q 017383 88 KELGNECFKQKKFKEAIDCYSRSIALSPT 116 (372)
Q Consensus 88 ~~~g~~~~~~g~~~~Ai~~y~~al~~~p~ 116 (372)
..+|..+...|+++.|+.+|-+|+...|+
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999998887
No 277
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=59.03 E-value=21 Score=34.37 Aligned_cols=87 Identities=8% Similarity=-0.078 Sum_probs=58.9
Q ss_pred hcHHHHHHHHHHHHccC------------CC-----HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC--------CC--C
Q 017383 98 KKFKEAIDCYSRSIALS------------PT-----AVAYANRAMAYLKLRRFQEAEDDCTEALNLD--------DR--Y 150 (372)
Q Consensus 98 g~~~~Ai~~y~~al~~~------------p~-----~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~--------p~--~ 150 (372)
...++|.....++.... |. .....++-.+|+++|+..-+...+...-... |. -
T Consensus 140 ~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~ 219 (455)
T 3t5v_B 140 QFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQ 219 (455)
T ss_dssp HHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccce
Confidence 35666777777776641 11 1223556678999998888776665432221 11 1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc-CCCc
Q 017383 151 IKAYSRRATARKELGKLKESIEDSEFALRL-EPQN 184 (372)
Q Consensus 151 ~~a~~~lg~~~~~lg~~~~A~~~~~~al~l-~P~~ 184 (372)
+..+|.+|..+...++|.+|..++..|++. .|..
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 456788999999999999999999999988 6654
No 278
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=58.01 E-value=51 Score=23.98 Aligned_cols=36 Identities=8% Similarity=-0.011 Sum_probs=17.4
Q ss_pred HHHHHHHHHccCCCcHHHHHHHHHHHHHHHHHHHhh
Q 017383 170 SIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQK 205 (372)
Q Consensus 170 A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~~~~~~ 205 (372)
|++.|..+++..|+...-.....++...+.++-..+
T Consensus 41 Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~LK 76 (93)
T 1wfd_A 41 GIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIK 76 (93)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555566666654433333444444555544433
No 279
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=56.55 E-value=35 Score=36.87 Aligned_cols=87 Identities=10% Similarity=0.037 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHHccC--------------------C--C--HHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 017383 88 KELGNECFKQKKFKEAIDCYSRSIALS--------------------P--T--AVAYANRAMAYLKLRRFQEAEDDCTEA 143 (372)
Q Consensus 88 ~~~g~~~~~~g~~~~Ai~~y~~al~~~--------------------p--~--~~~~~~la~~~~~~g~~~eA~~~~~~A 143 (372)
+.+|.+|+..|++++|..+|.++-..- + . +..|......+.+.|.++.++.....|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 556666666666666666666652210 0 0 233445555566666666666666666
Q ss_pred HhcCCC-CH----HHHHHHHHHHHHcCCHHHHHHHH
Q 017383 144 LNLDDR-YI----KAYSRRATARKELGKLKESIEDS 174 (372)
Q Consensus 144 l~l~p~-~~----~a~~~lg~~~~~lg~~~~A~~~~ 174 (372)
|+..+. +. ..|.++=..+..+|+|++|...+
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL 961 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVAL 961 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 665432 21 13555556666666666665555
No 280
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=56.47 E-value=72 Score=26.99 Aligned_cols=83 Identities=13% Similarity=0.062 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al~--l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
..+|...+..+ ..+...++...|.-... +.-..+.-|...|..+...|++.+|...|+.++...-. -...|.+.
T Consensus 80 LklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~---P~~rL~~~ 155 (202)
T 3esl_A 80 LKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCR---PYNRLLRS 155 (202)
T ss_dssp HHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB---SHHHHHHH
T ss_pred HHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc---cHHHHHHH
Confidence 44454444433 12335566666666554 44566777777888888888888888888888876532 23455555
Q ss_pred HHHHHHHHH
Q 017383 195 KSLYEKEVF 203 (372)
Q Consensus 195 ~~~~~~~~~ 203 (372)
...+..-+.
T Consensus 156 ~~~F~~R~~ 164 (202)
T 3esl_A 156 LSNYEDRLR 164 (202)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555554333
No 281
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=54.99 E-value=1.7e+02 Score=29.16 Aligned_cols=116 Identities=9% Similarity=-0.050 Sum_probs=78.9
Q ss_pred CCchhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC-HHHHHHHHHHHHHhcCHHHHHHHH
Q 017383 62 SRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT-AVAYANRAMAYLKLRRFQEAEDDC 140 (372)
Q Consensus 62 g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~-~~~~~~la~~~~~~g~~~eA~~~~ 140 (372)
+...++...+........+ ... .....+. .++.|++..|..+|.+.-..... ....+-+|.++..+|+.++|...|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~-~~~-~e~~~r~-Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~ 342 (618)
T 1qsa_A 266 DVTDEQAKWRDDAIMRSQS-TSL-IERRVRM-ALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEIL 342 (618)
T ss_dssp TCCHHHHHHHHHHHHTCCC-HHH-HHHHHHH-HHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCChHHHHHHHhccccCCC-hHH-HHHHHHH-HHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHH
Confidence 4356777777776654433 222 2334444 45779999999999775442223 777889999999999999999999
Q ss_pred HHHHhcC-----------------------CCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 141 TEALNLD-----------------------DRY-----IKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 141 ~~Al~l~-----------------------p~~-----~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
.++..-. +.. ...-..++..+..+|....|...+..++..
T Consensus 343 ~~~a~~~~fYg~lAa~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~r~~~L~~~g~~~~a~~ew~~~~~~ 410 (618)
T 1qsa_A 343 HQLMQQRGFYPMVAAQRIGEEYELKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKS 410 (618)
T ss_dssp HHHHTSCSHHHHHHHHHTTCCCCCCCCCCCSCCCCHHHHSHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHhcCCChHHHHHHHHcCCCCCCCCCCCChhHHhhhccChHHHHHHHHHHCCChhhHHHHHHHHHhc
Confidence 8876521 000 112356677788889988888888777653
No 282
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=54.87 E-value=19 Score=26.59 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=32.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHH
Q 017383 155 SRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEV 194 (372)
Q Consensus 155 ~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a 194 (372)
..+|..+...|+++.|+.+|-+|+.+.|.-.+....|+..
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~T 63 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQT 63 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence 3589999999999999999999999998866655554443
No 283
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=54.66 E-value=53 Score=23.87 Aligned_cols=46 Identities=17% Similarity=0.181 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC---HHHH-HHHHHHHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT---AVAY-ANRAMAYL 128 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~---~~~~-~~la~~~~ 128 (372)
.+......|..+++.++|.+|+..|+++..+..+ -.++ +-++.|--
T Consensus 52 ~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ten~~i~ki~~fyl~ec~k 101 (106)
T 2vkj_A 52 KARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRK 101 (106)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchhHHHHHHHHHHccccCHHHHHHHHHHHHHHHH
Confidence 5666778888899999999999999999876655 2333 55565543
No 284
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=53.46 E-value=1.3e+02 Score=27.41 Aligned_cols=99 Identities=13% Similarity=0.040 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHccCC------C---HHH--------HHHHHHHHHH-hcCH--HHHHH-----HHH
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIALSP------T---AVA--------YANRAMAYLK-LRRF--QEAED-----DCT 141 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~~p------~---~~~--------~~~la~~~~~-~g~~--~eA~~-----~~~ 141 (372)
....|.-++..|++++|+..|+.+|..-| . ..+ -|.+|+...- .+.. ++..+ .|-
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 34678889999999999999999987532 1 122 2233332211 1110 00011 111
Q ss_pred HHHhcCCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHccCCCcH
Q 017383 142 EALNLDDRYIKAYSRRAT-ARKELGKLKESIEDSEFALRLEPQNQ 185 (372)
Q Consensus 142 ~Al~l~p~~~~a~~~lg~-~~~~lg~~~~A~~~~~~al~l~P~~~ 185 (372)
.-..|.|.+...-.+.|+ ..++.++|.-|....++.|++.|...
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~~ 241 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGP 241 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSH
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCHH
Confidence 112334444444444443 56788999999999999999999644
No 285
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=52.35 E-value=27 Score=29.52 Aligned_cols=52 Identities=13% Similarity=0.096 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC------HHHHHHHHHHHHHhcCHH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPT------AVAYANRAMAYLKLRRFQ 134 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~------~~~~~~la~~~~~~g~~~ 134 (372)
.+...+.+|..++.+++|.+|.+++..|+...|. -.++..+-.+-+-+|++.
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 4556788999999999999999999999998875 234444455556677754
No 286
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=51.05 E-value=1.4e+02 Score=27.05 Aligned_cols=98 Identities=18% Similarity=0.172 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHccCCC---------HHH--------HHHHHHHHHH-hcCH-----HHHHHHHHHH
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIALSPT---------AVA--------YANRAMAYLK-LRRF-----QEAEDDCTEA 143 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~---------~~~--------~~~la~~~~~-~g~~-----~eA~~~~~~A 143 (372)
....|.-++..|++++|+..|+.+|..-|- ..+ .|.+|+...- .+.. ++-...++-|
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 346788899999999999999999986431 111 2334442211 1111 1211112221
Q ss_pred -----HhcCCCCHHHHHHHHH-HHHHcCCHHHHHHHHHHHHccCCCc
Q 017383 144 -----LNLDDRYIKAYSRRAT-ARKELGKLKESIEDSEFALRLEPQN 184 (372)
Q Consensus 144 -----l~l~p~~~~a~~~lg~-~~~~lg~~~~A~~~~~~al~l~P~~ 184 (372)
..|.|.+...-.+.|+ ..++.++|.-|....++.|++.|..
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 231 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKP 231 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCCH
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 2344555444444554 6678899999999999999999863
No 287
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=50.44 E-value=19 Score=26.37 Aligned_cols=26 Identities=19% Similarity=0.381 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHc
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIA 112 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~ 112 (372)
+...|..+-..|+|++|+.+|..+++
T Consensus 18 lv~~Ave~D~~g~y~eAl~~Y~~Aie 43 (93)
T 1wfd_A 18 VLKRAVELDAESRYQQALVCYQEGID 43 (93)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34555556666777777777666553
No 288
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=49.84 E-value=20 Score=25.61 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHc
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIA 112 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~ 112 (372)
+...|...-..|+|++|+.+|..+++
T Consensus 16 l~~~Av~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 16 LVQKAIDLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 33445555566777777777666554
No 289
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=48.37 E-value=88 Score=23.83 Aligned_cols=36 Identities=14% Similarity=0.143 Sum_probs=17.8
Q ss_pred HHHHHHHHHccCCCcHHHH-HHHHHHHHHHHHHHHhh
Q 017383 170 SIEDSEFALRLEPQNQEIK-KQLAEVKSLYEKEVFQK 205 (372)
Q Consensus 170 A~~~~~~al~l~P~~~~~~-~~l~~a~~~~~~~~~~~ 205 (372)
|+++|..+++..+.+.... ....++...+.++-..+
T Consensus 44 Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~RAE~LK 80 (117)
T 2cpt_A 44 AVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLK 80 (117)
T ss_dssp HHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555666665555433 33344444555544443
No 290
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=48.22 E-value=14 Score=26.23 Aligned_cols=27 Identities=15% Similarity=0.202 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHcc
Q 017383 87 EKELGNECFKQKKFKEAIDCYSRSIAL 113 (372)
Q Consensus 87 ~~~~g~~~~~~g~~~~Ai~~y~~al~~ 113 (372)
...+|..|...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 346788888899999999999888764
No 291
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=47.89 E-value=36 Score=28.70 Aligned_cols=51 Identities=14% Similarity=0.015 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHH-----HHHHHHHHHHcCCH
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKA-----YSRRATARKELGKL 167 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a-----~~~lg~~~~~lg~~ 167 (372)
...++.+|..++..++|.+|..++..|+...|..... +..+-.+..-+|++
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~i 69 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHM 69 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCC
Confidence 5567889999999999999999999999998866433 22333344456764
No 292
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=47.57 E-value=21 Score=27.43 Aligned_cols=23 Identities=17% Similarity=0.327 Sum_probs=13.8
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHH
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSI 111 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al 111 (372)
..|..+-..|+|++|+.+|..++
T Consensus 23 ~~Ave~D~ag~y~eAl~lY~~Ai 45 (117)
T 2cpt_A 23 SKAAQEDKAGNYEEALQLYQHAV 45 (117)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHH
Confidence 44444556677777777755543
No 293
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=45.88 E-value=46 Score=32.00 Aligned_cols=63 Identities=13% Similarity=-0.032 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhcHHHHHHHHHHHH--------ccCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-CCCC
Q 017383 88 KELGNECFKQKKFKEAIDCYSRSI--------ALSPT---AVAYANRAMAYLKLRRFQEAEDDCTEALNL-DDRY 150 (372)
Q Consensus 88 ~~~g~~~~~~g~~~~Ai~~y~~al--------~~~p~---~~~~~~la~~~~~~g~~~eA~~~~~~Al~l-~p~~ 150 (372)
..+-.+|++.++..-|-..+...- ...|. ...++.+|..++..++|.+|..++..|+.. .|..
T Consensus 180 n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 180 NKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 344577889999888887775432 22233 566788999999999999999999999998 6654
No 294
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=45.64 E-value=1e+02 Score=24.69 Aligned_cols=49 Identities=8% Similarity=-0.035 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHccCC--C-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017383 101 KEAIDCYSRSIALSP--T-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR 149 (372)
Q Consensus 101 ~~Ai~~y~~al~~~p--~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~ 149 (372)
.++...|.-.....= . +..|...|..+...|++.+|...|..+++....
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 447778777766543 2 888888999999999999999999999987644
No 295
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=44.79 E-value=41 Score=32.09 Aligned_cols=30 Identities=7% Similarity=-0.055 Sum_probs=23.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 017383 150 YIKAYSRRATARKELGKLKESIEDSEFALR 179 (372)
Q Consensus 150 ~~~a~~~lg~~~~~lg~~~~A~~~~~~al~ 179 (372)
...++..+|.+|...|+|++|....++++.
T Consensus 189 k~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 189 KYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 356777788888888888888888888875
No 296
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=44.49 E-value=1e+02 Score=24.95 Aligned_cols=59 Identities=10% Similarity=0.025 Sum_probs=43.9
Q ss_pred HHHHHHHHHhcCHHHHHHHHHHHHhcCCCC------HHHHHH-HHH--HHHHcCCHHHHHHHHHHHHc
Q 017383 121 ANRAMAYLKLRRFQEAEDDCTEALNLDDRY------IKAYSR-RAT--ARKELGKLKESIEDSEFALR 179 (372)
Q Consensus 121 ~~la~~~~~~g~~~eA~~~~~~Al~l~p~~------~~a~~~-lg~--~~~~lg~~~~A~~~~~~al~ 179 (372)
+..|..++..|+|-+|-+.++.+-...+.. ...+.. ++. .+...|+...|...+.+++.
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 445777888899999999999988775543 344444 443 44567999999999999876
No 297
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=43.66 E-value=47 Score=31.87 Aligned_cols=30 Identities=7% Similarity=0.096 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 151 IKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 151 ~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
..|+..+|.+|...|+|++|....++++..
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 556777788888888888888888887754
No 298
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=42.74 E-value=45 Score=31.90 Aligned_cols=29 Identities=17% Similarity=0.139 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 017383 151 IKAYSRRATARKELGKLKESIEDSEFALR 179 (372)
Q Consensus 151 ~~a~~~lg~~~~~lg~~~~A~~~~~~al~ 179 (372)
..|+..+|.+|...|+|++|....++++.
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 56777888888888888888888888875
No 299
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=41.67 E-value=2.1e+02 Score=26.18 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHH-HH
Q 017383 83 DATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRAT-AR 161 (372)
Q Consensus 83 ~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~-~~ 161 (372)
+...+..+|..|++.++|.+|..+|- +..++.+..+.++=.-+... .+|.....+..+|. .|
T Consensus 135 dp~LH~~ig~~~~~e~~~~~Ae~H~i--lg~~~s~~~~a~mL~ew~~~---------------~~~~e~dlfiaRaVL~y 197 (336)
T 3lpz_A 135 DPELHHVVGTLYVEEGEFEAAEKHLV--LGTKESPEVLARMEYEWYKQ---------------DESHTAPLYCARAVLPY 197 (336)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHT--TSCTTHHHHHHHHHHHHHHT---------------SCGGGHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHccCCHHHHHHHHH--hcCCchHHHHHHHHHHHHHh---------------cCCccHHHHHHHHHHHH
Confidence 44445566666666666666666652 22222223332221111111 12455566666664 66
Q ss_pred HHcCCHHHHHHHHHHHH
Q 017383 162 KELGKLKESIEDSEFAL 178 (372)
Q Consensus 162 ~~lg~~~~A~~~~~~al 178 (372)
..+|+...|...|..-+
T Consensus 198 L~l~n~~~A~~~~~~f~ 214 (336)
T 3lpz_A 198 LLVANVRAANTAYRIFT 214 (336)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHH
Confidence 78888888877554443
No 300
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=40.91 E-value=93 Score=21.95 Aligned_cols=31 Identities=13% Similarity=0.045 Sum_probs=12.9
Q ss_pred HHHHHHccCCCcHHHHHHHHHHHHHHHHHHH
Q 017383 173 DSEFALRLEPQNQEIKKQLAEVKSLYEKEVF 203 (372)
Q Consensus 173 ~~~~al~l~P~~~~~~~~l~~a~~~~~~~~~ 203 (372)
.|..+++..++...-.....++...+.++-.
T Consensus 42 ~l~~a~k~e~~~~~k~~l~~k~~eYl~RAE~ 72 (85)
T 2v6x_A 42 YLMLALKYEKNPKSKDLIRAKFTEYLNRAEQ 72 (85)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455433322333444444444433
No 301
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=40.86 E-value=91 Score=30.21 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhcCCC-----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 133 FQEAEDDCTEALNLDDR-----------YIKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 133 ~~eA~~~~~~Al~l~p~-----------~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
|+..+.+++.|+..-|. ...|+..+|.++...++|++|....++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55677788888775442 2567889999999999999999999999864
No 302
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=39.95 E-value=72 Score=32.16 Aligned_cols=49 Identities=14% Similarity=0.042 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCC
Q 017383 118 VAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGK 166 (372)
Q Consensus 118 ~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~ 166 (372)
.....+|...+..|+|.-|.+.+..++..+|++..+...++.+|.++|.
T Consensus 450 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 450 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 3444566666677777777777777777777777777777777777764
No 303
>2ynq_A ESSB; membrane protein, secretion, type V, secretion system; 2.40A {Geobacillus thermodenitrificans}
Probab=39.59 E-value=1.2e+02 Score=24.53 Aligned_cols=82 Identities=16% Similarity=0.159 Sum_probs=54.7
Q ss_pred HHHHHHHHhhcHHHHHHHHHHHHccCCC---HHHHHHHHHHHHHhcCHHHH-HHHHHHHHhcCCCCHHHHHHHHHHHHHc
Q 017383 89 ELGNECFKQKKFKEAIDCYSRSIALSPT---AVAYANRAMAYLKLRRFQEA-EDDCTEALNLDDRYIKAYSRRATARKEL 164 (372)
Q Consensus 89 ~~g~~~~~~g~~~~Ai~~y~~al~~~p~---~~~~~~la~~~~~~g~~~eA-~~~~~~Al~l~p~~~~a~~~lg~~~~~l 164 (372)
.-++..|-..+|.+.|..+.. .+|. ....+.+|..|....++.+- .......+.+.. .-.+.+=+++...
T Consensus 13 i~a~~afl~~dYs~VI~~L~~---~~~~~Lp~~~kY~LA~SYI~~e~Ls~eQKenIln~itlkS---de~yL~YWIyiGR 86 (161)
T 2ynq_A 13 IQSTELFLQNKYSDVITTLED---YAPEDMPYVIQYELASSYVMTESLTEEQRQTVSNNITLKT---DEQYMLYWIYIGR 86 (161)
T ss_dssp HHHHHHHTTTCHHHHHHHHTT---SCGGGSCHHHHHHHHHHHHHTSSSCHHHHHHHHHTCCTTS---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHhc---CChhhCChhHHHHHHHHHHHccCCCHHHHHHHHhhCCccC---CHHHHHHHHHHcC
Confidence 457778889999999888765 4565 67789999999988876532 222222222221 2233445667778
Q ss_pred CCHHHHHHHHHH
Q 017383 165 GKLKESIEDSEF 176 (372)
Q Consensus 165 g~~~~A~~~~~~ 176 (372)
|++++|+.....
T Consensus 87 g~~~eAlDiA~~ 98 (161)
T 2ynq_A 87 SQSEEALELART 98 (161)
T ss_dssp TCHHHHHHHHHH
T ss_pred CchHHHHHHHHh
Confidence 999999877544
No 304
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=39.36 E-value=1.5e+02 Score=24.00 Aligned_cols=49 Identities=22% Similarity=0.262 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHccC--CC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017383 101 KEAIDCYSRSIALS--PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR 149 (372)
Q Consensus 101 ~~Ai~~y~~al~~~--p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~ 149 (372)
.++...|.-..... .. +..|...|..+...|++.+|...|..++.....
T Consensus 77 ~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~ 128 (164)
T 2wvi_A 77 NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAE 128 (164)
T ss_dssp SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 44667777766544 33 888889999999999999999999999987643
No 305
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=38.86 E-value=1.4e+02 Score=23.97 Aligned_cols=81 Identities=11% Similarity=-0.100 Sum_probs=57.5
Q ss_pred CCCCchhhHHHHHhhhhcCCCCchHHHHHHHHHH-HHHhhcHHHHHHHHHHHHccC-CCHHHHHHHHHHHHHhcCHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNEESTPDATSEKELGNE-CFKQKKFKEAIDCYSRSIALS-PTAVAYANRAMAYLKLRRFQEAE 137 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~~~g~~-~~~~g~~~~Ai~~y~~al~~~-p~~~~~~~la~~~~~~g~~~eA~ 137 (372)
..|+...-+.+|-+.=... - |.++|.- +..+|+-++--..+...+.-. |++..+..+|.+|-++|+..+|.
T Consensus 73 ~C~NlKrVi~C~~~~n~~s-----e--~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~ 145 (172)
T 1wy6_A 73 KCQNLKSVVECGVINNTLN-----E--HVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDAT 145 (172)
T ss_dssp GCSCTHHHHHHHHHTTCCC-----H--HHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hhhcHHHHHHHHHHhcchH-----H--HHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHH
Confidence 3467777777776553332 1 3355644 567788777777777755544 44999999999999999999999
Q ss_pred HHHHHHHhcC
Q 017383 138 DDCTEALNLD 147 (372)
Q Consensus 138 ~~~~~Al~l~ 147 (372)
+.+.+|.+..
T Consensus 146 eLl~~AC~kG 155 (172)
T 1wy6_A 146 TLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999987643
No 306
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=38.12 E-value=1.9e+02 Score=30.61 Aligned_cols=117 Identities=13% Similarity=-0.019 Sum_probs=73.6
Q ss_pred CCCCchhhHHHHHhhhhcC---CCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCC--------C---HHHHHHHHH
Q 017383 60 SYSRNYDPVSHISSSLMNE---ESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP--------T---AVAYANRAM 125 (372)
Q Consensus 60 ~~g~~~~A~~~~~~al~~~---p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p--------~---~~~~~~la~ 125 (372)
..|+.++++..+.+.|-.. .....+-+++.+|.++...++ +++..+...+.-+. . ..+...+|.
T Consensus 386 h~g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~~--~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGl 463 (963)
T 4ady_A 386 HKGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFGR--DTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGL 463 (963)
T ss_dssp TSSCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTTH--HHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCcH--HHHHHHHHHHcCccccccccccHHHHHHHHHHHHH
Confidence 4577788888888877632 112244556667776665554 68888887776433 1 345567777
Q ss_pred HHHHhcCHHHHHHHHHHHHhcCCCCH--HHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 017383 126 AYLKLRRFQEAEDDCTEALNLDDRYI--KAYSRRATARKELGKLKESIEDSEFALR 179 (372)
Q Consensus 126 ~~~~~g~~~eA~~~~~~Al~l~p~~~--~a~~~lg~~~~~lg~~~~A~~~~~~al~ 179 (372)
+|...++ +++...+...+.-+.... .+-+.+|.++...|+-+.....+..+..
T Consensus 464 a~~GS~~-eev~e~L~~~L~dd~~~~~~~AalALGli~vGTgn~~ai~~LL~~~~e 518 (963)
T 4ady_A 464 AAMGSAN-IEVYEALKEVLYNDSATSGEAAALGMGLCMLGTGKPEAIHDMFTYSQE 518 (963)
T ss_dssp HSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred HhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHhc
Confidence 7776665 466777777776443222 3455677777788887666666555554
No 307
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=37.37 E-value=1.4e+02 Score=27.88 Aligned_cols=50 Identities=20% Similarity=0.148 Sum_probs=36.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc------CCCcHHHHHHHHHHHH
Q 017383 147 DDRYIKAYSRRATARKELGKLKESIEDSEFALRL------EPQNQEIKKQLAEVKS 196 (372)
Q Consensus 147 ~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~a~~ 196 (372)
+..+...|..+|-.+++.+++.+|+..+..+-.. .-++.++++++-++..
T Consensus 292 ~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 347 (472)
T 3re2_A 292 SDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIAN 347 (472)
T ss_dssp TTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred ccCCccchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHH
Confidence 3556778888999999999999999998876542 2345566666555543
No 308
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=37.34 E-value=83 Score=25.27 Aligned_cols=62 Identities=11% Similarity=0.089 Sum_probs=44.9
Q ss_pred HHHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHH
Q 017383 135 EAEDDCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYE 199 (372)
Q Consensus 135 eA~~~~~~Al~--l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~ 199 (372)
++...|..... +.-..+.-|...|..+...|++.+|...|+.++..... -...|.+....|.
T Consensus 83 dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~---P~~rL~~~~~~F~ 146 (152)
T 4a1g_A 83 DLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE---PREFLQQQYRLFQ 146 (152)
T ss_dssp CHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB---SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc---cHHHHHHHHHHHH
Confidence 36666666655 44567888888999999999999999999999987543 2345555554443
No 309
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=37.18 E-value=1.2e+02 Score=26.11 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHccC--CC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017383 101 KEAIDCYSRSIALS--PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR 149 (372)
Q Consensus 101 ~~Ai~~y~~al~~~--p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~ 149 (372)
+++...|.-..... -. +..|...|..+...|+|.+|...|..+++....
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 46777777766644 33 888899999999999999999999999987654
No 310
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=36.98 E-value=1.3e+02 Score=28.49 Aligned_cols=50 Identities=20% Similarity=0.183 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc------CCCcHHHHHHHHHHHH
Q 017383 147 DDRYIKAYSRRATARKELGKLKESIEDSEFALRL------EPQNQEIKKQLAEVKS 196 (372)
Q Consensus 147 ~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l------~P~~~~~~~~l~~a~~ 196 (372)
...+...|..+|-.+++.+++.+|+..+..+-.. .-++.++++++-++..
T Consensus 314 ~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAn 369 (550)
T 3u84_A 314 RDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVAN 369 (550)
T ss_dssp TTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHH
T ss_pred ccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHH
Confidence 3566778889999999999999999998876532 2456777776666554
No 311
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=36.82 E-value=75 Score=30.53 Aligned_cols=63 Identities=17% Similarity=0.101 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHhcC----------------------------HHHHHHHHHHHHhcCCC--------CHHHHHHHHHH
Q 017383 117 AVAYANRAMAYLKLRR----------------------------FQEAEDDCTEALNLDDR--------YIKAYSRRATA 160 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~----------------------------~~eA~~~~~~Al~l~p~--------~~~a~~~lg~~ 160 (372)
+.+++.||.+|+.+-+ |+..+.+++.|+.+-|. ...|+..+|.+
T Consensus 110 aEa~flRA~~yf~L~~~fG~VP~~~~~~~~~~~~~~~r~~~~evy~~I~~DL~~A~~~Lp~~~~~gr~tk~aA~allarv 189 (481)
T 3jq1_A 110 GECLFIRGFYLFQLAKEFKDAPLRLTASQSPSTFPLAKSSQADIWAQAKEDLKTAASLLPITNKIGKPTQGAAYAALGKI 189 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHSSEECCCCCCSSCCCSCCCEECHHHHHHHHHHHHHHHHHHSCSSCSTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCeeeeccCCCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHHHH
Confidence 6777888888877632 66788888888876542 25678889999
Q ss_pred HHHcCCHHHHHHHHHHHHc
Q 017383 161 RKELGKLKESIEDSEFALR 179 (372)
Q Consensus 161 ~~~lg~~~~A~~~~~~al~ 179 (372)
|...|++++|...+++++.
T Consensus 190 yL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 190 YVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHTTCHHHHHHHHGGGGS
T ss_pred HHHHhHHHHHHHHHHHHHh
Confidence 9999999999999998874
No 312
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=35.92 E-value=1.2e+02 Score=25.68 Aligned_cols=63 Identities=13% Similarity=-0.012 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHccC--CC-HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC
Q 017383 86 SEKELGNECFKQKKFKEAIDCYSRSIALS--PT-AVAYANRAMAYLKLRRFQEAEDDCTEALNLDDR 149 (372)
Q Consensus 86 ~~~~~g~~~~~~g~~~~Ai~~y~~al~~~--p~-~~~~~~la~~~~~~g~~~eA~~~~~~Al~l~p~ 149 (372)
.|...+..+ ..+...++...|.-..... -. +..|...|..+...|++.+|...|..+++....
T Consensus 82 lWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~ 147 (202)
T 3esl_A 82 IWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCR 147 (202)
T ss_dssp HHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 344444433 2344777888887776654 33 888888999999999999999999999987643
No 313
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=35.85 E-value=67 Score=31.03 Aligned_cols=31 Identities=10% Similarity=-0.156 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 150 YIKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 150 ~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
...|+..+|.+|...|+|++|....++++..
T Consensus 202 k~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 202 NEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3567888899999999999999999998865
No 314
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=33.52 E-value=1.1e+02 Score=29.15 Aligned_cols=48 Identities=21% Similarity=0.107 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHhcCCC-----------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 133 FQEAEDDCTEALNLDDR-----------------------YIKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 133 ~~eA~~~~~~Al~l~p~-----------------------~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
|+.-+.+++.|+.+-|. ..-|+..+|.+|...|+|++|....++++..
T Consensus 156 y~~I~~DL~~A~~~Lp~~~~~~~~~~~~~~~~~~~~~r~tk~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 156 LSYAKAELLTAIEDLPYQYGTQTNLYYGSYGAQWQGKLFNKLSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHHCCSSCCCSSSCBTTBCGGGGTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccccCCccccccccccccccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 56677788888775331 2457888999999999999999999999864
No 315
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=33.01 E-value=49 Score=30.78 Aligned_cols=43 Identities=16% Similarity=0.254 Sum_probs=34.1
Q ss_pred HHHHHHHHHccC----CC--HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017383 103 AIDCYSRSIALS----PT--AVAYANRAMAYLKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 103 Ai~~y~~al~~~----p~--~~~~~~la~~~~~~g~~~eA~~~~~~Al~ 145 (372)
++..|.+|+... .+ ...|..+|.+|++.+++.+|+..+..|-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 678888888752 22 66777889999999999999998887754
No 316
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=33.00 E-value=92 Score=29.58 Aligned_cols=25 Identities=28% Similarity=0.065 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHhcCHHHHHHHHHHH
Q 017383 119 AYANRAMAYLKLRRFQEAEDDCTEA 143 (372)
Q Consensus 119 ~~~~la~~~~~~g~~~eA~~~~~~A 143 (372)
++..+|.+|+.+|+|++|+..++.+
T Consensus 192 a~allarvyL~~~~~~~A~~~a~~v 216 (454)
T 3myv_A 192 ARALLARIYLYHDDNRKAFDLADQL 216 (454)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3444444444444444444444433
No 317
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=31.68 E-value=99 Score=28.01 Aligned_cols=28 Identities=14% Similarity=0.144 Sum_probs=21.8
Q ss_pred CchHHHHHHHHHHHHHhhcHHHHHHHHH
Q 017383 81 TPDATSEKELGNECFKQKKFKEAIDCYS 108 (372)
Q Consensus 81 ~~~a~~~~~~g~~~~~~g~~~~Ai~~y~ 108 (372)
..+...+..+|..|++.|++.+|..+|-
T Consensus 131 ~Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 131 FGDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp TCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 3455667788888888888888888774
No 318
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=30.64 E-value=96 Score=29.53 Aligned_cols=28 Identities=21% Similarity=0.158 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEAL 144 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al 144 (372)
..++..+|.+|+.+|+|++|+..+..+|
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi 223 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAI 223 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4455556666666666666666666555
No 319
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=30.37 E-value=45 Score=23.57 Aligned_cols=23 Identities=22% Similarity=0.159 Sum_probs=11.5
Q ss_pred HHHHHHHHhcCHHHHHHHHHHHH
Q 017383 122 NRAMAYLKLRRFQEAEDDCTEAL 144 (372)
Q Consensus 122 ~la~~~~~~g~~~eA~~~~~~Al 144 (372)
.+|.=|..+|+|+.|+.+|+.++
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~ 39 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVL 39 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHH
Confidence 34444555555555555555444
No 320
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=30.03 E-value=1.8e+02 Score=28.18 Aligned_cols=64 Identities=19% Similarity=0.007 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHhcC----------------------------HHHHHHHHHHHHhcCCC-------------CHHHHH
Q 017383 117 AVAYANRAMAYLKLRR----------------------------FQEAEDDCTEALNLDDR-------------YIKAYS 155 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~----------------------------~~eA~~~~~~Al~l~p~-------------~~~a~~ 155 (372)
+.+++.||.+|+.+-+ ++..+.+++.|+..-|. ...|+.
T Consensus 123 aEa~flRA~~Yf~L~~~yG~VPl~~~~~~~~~~~~~~r~~~~ev~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~a 202 (528)
T 3i4g_A 123 AEARFLRATQYFYLASYFKNVPLVENVLTGEEANNVTKTSQADILKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALA 202 (528)
T ss_dssp HHHHHHHHHHHHHHHHHTCSBCCCCSCCCHHHHTTCCCBCHHHHHHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcceeCCCCCccccccCCCCCHHHHHHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHH
Confidence 6777888888877632 55677788888876551 146788
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 156 RRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 156 ~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
.+|.++...+++++|...+++++..
T Consensus 203 llarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 203 FLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 8999999999999999999999853
No 321
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=29.24 E-value=1.1e+02 Score=29.30 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHh
Q 017383 117 AVAYANRAMAYLKL 130 (372)
Q Consensus 117 ~~~~~~la~~~~~~ 130 (372)
+.+++.||.+|+.+
T Consensus 123 gEa~flRA~~yf~L 136 (477)
T 3mcx_A 123 SEALVMRGLSLFNL 136 (477)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44455555555443
No 322
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=26.95 E-value=71 Score=30.34 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=33.0
Q ss_pred HHHHHHHHHccC----CC--HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017383 103 AIDCYSRSIALS----PT--AVAYANRAMAYLKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 103 Ai~~y~~al~~~----p~--~~~~~~la~~~~~~g~~~eA~~~~~~Al~ 145 (372)
++..|.+|+... .+ ...|..+|-+|++.+++.+|+..+..|-.
T Consensus 298 ~~~L~~~AI~sa~~~Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~ 346 (550)
T 3u84_A 298 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTAT 346 (550)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccceeecchhhhhcchHHHHHHHHHHHHH
Confidence 577777777642 22 66777789999999999999998877644
No 323
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=26.86 E-value=1.3e+02 Score=28.95 Aligned_cols=14 Identities=43% Similarity=0.544 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHh
Q 017383 117 AVAYANRAMAYLKL 130 (372)
Q Consensus 117 ~~~~~~la~~~~~~ 130 (372)
+.+++.||.+|+.+
T Consensus 119 gEA~flRA~~Yf~L 132 (495)
T 3lew_A 119 GQALALRGFLYLHL 132 (495)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45555566655543
No 324
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=26.48 E-value=96 Score=29.72 Aligned_cols=63 Identities=21% Similarity=0.048 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhcC----------------------------HH-HHHHHHHHHHhc---------CCCCHHHHHHHH
Q 017383 117 AVAYANRAMAYLKLRR----------------------------FQ-EAEDDCTEALNL---------DDRYIKAYSRRA 158 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~----------------------------~~-eA~~~~~~Al~l---------~p~~~~a~~~lg 158 (372)
+.+++.||.+|+.+=+ |+ .-+.+++.|+.+ ..+...|+..+|
T Consensus 116 aEa~flRA~~Yf~L~~~~G~VPl~~~~~~~~~~~~~~r~~~~evy~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~alla 195 (482)
T 3otn_A 116 AEVKFMRALYYFYLVRIFGDVPKITTVQSELGELQVSRAPVKEIYDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLA 195 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHSSBCCCCSCGGGCSCSSCCCBCHHHHHHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcceeCCCCCcccccccCCCCHHHHHHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHH
Q ss_pred HHHHHcC---------CHHHHHHHHHHHHc
Q 017383 159 TARKELG---------KLKESIEDSEFALR 179 (372)
Q Consensus 159 ~~~~~lg---------~~~~A~~~~~~al~ 179 (372)
.+|...| +|++|....++++.
T Consensus 196 rvyL~~~~~~~~~~~~~~~~A~~~a~~vi~ 225 (482)
T 3otn_A 196 DVYLTYAGYPLQGGKSYYAESAKRSLEVIK 225 (482)
T ss_dssp HHHHHHHSTTTCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcccCcHHHHHHHHHHHHHHHc
No 325
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.80 E-value=43 Score=25.66 Aligned_cols=43 Identities=21% Similarity=0.316 Sum_probs=0.0
Q ss_pred chhhHHHHHhhhhcCCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC
Q 017383 64 NYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT 116 (372)
Q Consensus 64 ~~~A~~~~~~al~~~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~ 116 (372)
|++|..+..++|.++ ..|.-.....-|.++|.++.++|.+..+
T Consensus 19 h~~AF~~Is~AL~~D----------E~g~k~~Al~lYk~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTD----------ELGQKEEAKNYYKQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHH----------HHTCHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHhhhh----------hcCCHHHHHHHHHHHHHHHHHhcccccc
No 326
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=25.79 E-value=1.2e+02 Score=29.32 Aligned_cols=30 Identities=27% Similarity=0.484 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEALNL 146 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al~l 146 (372)
..++..+|.+|+..++|++|+..++.++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 578899999999999999999999999964
No 327
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=25.43 E-value=25 Score=25.71 Aligned_cols=35 Identities=23% Similarity=0.278 Sum_probs=27.6
Q ss_pred CchhHHHHHHhhhcCCHHHHHHHHhhcCCCchhHHHHhhc
Q 017383 316 KSAYEFEVSWRGFAGDHALQARLLKAISPNALPQIFKNAL 355 (372)
Q Consensus 316 ~~s~~f~~~~~~~~~~~~~~~~yl~~i~p~~l~~~f~~~l 355 (372)
-++|.|.+.|+--..+. ....|||..|-.+++++|
T Consensus 23 hsAf~f~~Es~i~~~~~-----~~~~VppgaLVsllQKGL 57 (90)
T 2xtc_A 23 HSAFTFGIESHISQSNI-----NGTLVPPAALISILQKGL 57 (90)
T ss_dssp HHHHHHHHHTTGGGSCC-----CGGGSCTTHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcccc-----ccccCCcchHHHHHHHHH
Confidence 37899999998776432 134699999999999887
No 328
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=24.47 E-value=16 Score=32.32 Aligned_cols=36 Identities=19% Similarity=0.373 Sum_probs=0.0
Q ss_pred CCCCchHHHHHHHHHHHHHhhcHHHHHHHHHHHHcc
Q 017383 78 EESTPDATSEKELGNECFKQKKFKEAIDCYSRSIAL 113 (372)
Q Consensus 78 ~p~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~ 113 (372)
+|....|..+...|..+-..|+|++|+.+|..++++
T Consensus 17 dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~ 52 (257)
T 2ymb_A 17 DPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDL 52 (257)
T ss_dssp ------------------------------------
T ss_pred ChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 333333444445555555667777777776666654
No 329
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=24.41 E-value=1.6e+02 Score=29.56 Aligned_cols=50 Identities=16% Similarity=0.120 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHH
Q 017383 151 IKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEK 200 (372)
Q Consensus 151 ~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~ 200 (372)
.......|......|+|.-|.+....++..+|+|.+++..+..+...+..
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGY 498 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 34566788888899999999999999999999999999988888776653
No 330
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=23.67 E-value=1.2e+02 Score=17.99 Aligned_cols=26 Identities=8% Similarity=0.419 Sum_probs=16.6
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHh
Q 017383 8 QALDFQGFLNDLQDWDLSLNEKDKKM 33 (372)
Q Consensus 8 n~~~l~~~~~~l~~~e~~ik~~~~~l 33 (372)
.+.++.+|++.++....+++...+-+
T Consensus 4 tvkelknyiqeleernaelknlkehl 29 (46)
T 3he4_B 4 TVKELKNYIQELEERNAELKNLKEHL 29 (46)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhHHHHhHHHHH
Confidence 45677777777776666666554443
No 331
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=22.77 E-value=78 Score=22.79 Aligned_cols=33 Identities=6% Similarity=0.195 Sum_probs=27.1
Q ss_pred CHHHHHHHHhhc-CCCchhHHH-HhhcCHHHHHHH
Q 017383 331 DHALQARLLKAI-SPNALPQIF-KNALSASILIDI 363 (372)
Q Consensus 331 ~~~~~~~yl~~i-~p~~l~~~f-~~~l~~~~~~~i 363 (372)
+++....||+.+ .-..|..+| .+.++.++|..+
T Consensus 18 s~edV~~wL~~l~gl~~y~~~F~~~~IdG~~LL~L 52 (89)
T 1kw4_A 18 SVDDVSNFIRELPGCQDYVDDFIQQEIDGQALLRL 52 (89)
T ss_dssp CHHHHHHHHHTSTTCGGGHHHHHHTTCCHHHHHHC
T ss_pred CHHHHHHHHHHCcChHHHHHHHHHhCccHHHHhcC
Confidence 368889999999 778899999 677898887653
No 332
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=22.54 E-value=2e+02 Score=20.85 Aligned_cols=21 Identities=19% Similarity=0.113 Sum_probs=9.9
Q ss_pred HHHHHHhcCHHHHHHHHHHHH
Q 017383 124 AMAYLKLRRFQEAEDDCTEAL 144 (372)
Q Consensus 124 a~~~~~~g~~~eA~~~~~~Al 144 (372)
|.-+++.++|.+|...|+++.
T Consensus 60 ak~~y~~~ny~ea~~l~~k~~ 80 (106)
T 2vkj_A 60 GKDLFETANYGEALVFFEKAL 80 (106)
T ss_dssp HHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHhcchhHHHHHHHHHH
Confidence 334444444555444444444
No 333
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=22.43 E-value=92 Score=29.90 Aligned_cols=29 Identities=24% Similarity=0.225 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al~ 145 (372)
..++..+|.+|+.+++|++|+..++.++.
T Consensus 180 ~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 180 GAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 66788899999999999999999999874
No 334
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=21.84 E-value=1.4e+02 Score=28.44 Aligned_cols=33 Identities=18% Similarity=-0.038 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcc
Q 017383 148 DRYIKAYSRRATARKELGKLKESIEDSEFALRL 180 (372)
Q Consensus 148 p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l 180 (372)
++...++..+|.+|...|+|++|....++++..
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 344667888999999999999999999999864
No 335
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.72 E-value=4.7e+02 Score=24.03 Aligned_cols=89 Identities=17% Similarity=0.028 Sum_probs=62.9
Q ss_pred HHHHHHhhcHHHHHHHHHHHHccC----------------CC--HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc------
Q 017383 91 GNECFKQKKFKEAIDCYSRSIALS----------------PT--AVAYANRAMAYLKLRRFQEAEDDCTEALNL------ 146 (372)
Q Consensus 91 g~~~~~~g~~~~Ai~~y~~al~~~----------------p~--~~~~~~la~~~~~~g~~~eA~~~~~~Al~l------ 146 (372)
..+.....+.++|+++.+.....- .. ..+...++..|+..|+..+|...++++-..
T Consensus 83 ~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~ 162 (393)
T 4b4t_O 83 LASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDS 162 (393)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCC
Confidence 344566788999999988764321 11 344566788899999999999998888643
Q ss_pred -CCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHc
Q 017383 147 -DDR-YIKAYSRRATARKELGKLKESIEDSEFALR 179 (372)
Q Consensus 147 -~p~-~~~a~~~lg~~~~~lg~~~~A~~~~~~al~ 179 (372)
+|. +...|...|..+...+++..+..++-..+.
T Consensus 163 ~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~ 197 (393)
T 4b4t_O 163 IPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLS 197 (393)
T ss_dssp SSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 221 244455677888889999888777777664
No 336
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=21.29 E-value=4e+02 Score=28.17 Aligned_cols=116 Identities=9% Similarity=0.010 Sum_probs=66.1
Q ss_pred CCchhhHHHHHhhhhcCC---C---C--chHHHHHHHHHHHHHhhcHHHHHHHHHHHHccCCC---HHHHHHHHHHHHHh
Q 017383 62 SRNYDPVSHISSSLMNEE---S---T--PDATSEKELGNECFKQKKFKEAIDCYSRSIALSPT---AVAYANRAMAYLKL 130 (372)
Q Consensus 62 g~~~~A~~~~~~al~~~p---~---~--~~a~~~~~~g~~~~~~g~~~~Ai~~y~~al~~~p~---~~~~~~la~~~~~~ 130 (372)
|...+++.++...+..+. . . ....+...+|.+++..++ +++++.+...+.-+.. ..+-+.+|.++...
T Consensus 425 g~~~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~GS~~-eev~e~L~~~L~dd~~~~~~~AalALGli~vGT 503 (963)
T 4ady_A 425 GFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAMGSAN-IEVYEALKEVLYNDSATSGEAAALGMGLCMLGT 503 (963)
T ss_dssp TTTHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHSTTCCC-HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTC
T ss_pred CCcHHHHHHHHHHHcCccccccccccHHHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHhcCCHHHHHHHHHHHhhhhccc
Confidence 334467777777776442 0 0 111234466666666555 4567777777764432 34456678888888
Q ss_pred cCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 017383 131 RRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKLKESIEDSEFAL 178 (372)
Q Consensus 131 g~~~eA~~~~~~Al~l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al 178 (372)
|+-+-....+..+..-..+...-...+|..+...|+.+.+....+...
T Consensus 504 gn~~ai~~LL~~~~e~~~e~vrR~aalgLGll~~g~~e~~~~li~~L~ 551 (963)
T 4ady_A 504 GKPEAIHDMFTYSQETQHGNITRGLAVGLALINYGRQELADDLITKML 551 (963)
T ss_dssp CCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCGGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCcHHHHHHHHHHHHhhhCCChHHHHHHHHHHH
Confidence 887665555565555433333333445555566777766655555443
No 337
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=20.57 E-value=3.4e+02 Score=21.90 Aligned_cols=67 Identities=9% Similarity=0.055 Sum_probs=48.6
Q ss_pred HHHHHHHHHh--cCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHHHHHhh
Q 017383 136 AEDDCTEALN--LDDRYIKAYSRRATARKELGKLKESIEDSEFALRLEPQNQEIKKQLAEVKSLYEKEVFQK 205 (372)
Q Consensus 136 A~~~~~~Al~--l~p~~~~a~~~lg~~~~~lg~~~~A~~~~~~al~l~P~~~~~~~~l~~a~~~~~~~~~~~ 205 (372)
+...|..... +.-..+.-|...|..+...|++.+|...|+.++..... -...|.++...|..-+...
T Consensus 79 p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~---P~~~L~~~~~~F~~R~~~~ 147 (164)
T 2wvi_A 79 PLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAE---PLERLQSQHRQFQARVSRQ 147 (164)
T ss_dssp HHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB---SHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHH
Confidence 5555655544 45667888888999999999999999999999987632 2456666666666554444
No 338
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.22 E-value=1.9e+02 Score=27.45 Aligned_cols=30 Identities=20% Similarity=0.094 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Q 017383 117 AVAYANRAMAYLKLRRFQEAEDDCTEALNL 146 (372)
Q Consensus 117 ~~~~~~la~~~~~~g~~~eA~~~~~~Al~l 146 (372)
..++..+|.+|+.+|+|++|+..++.+|..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 567888999999999999999999999964
No 339
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=20.19 E-value=1.7e+02 Score=27.83 Aligned_cols=28 Identities=29% Similarity=0.241 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Q 017383 118 VAYANRAMAYLKLRRFQEAEDDCTEALN 145 (372)
Q Consensus 118 ~~~~~la~~~~~~g~~~eA~~~~~~Al~ 145 (372)
.++..+|.+|+.+++|++|+..++.++.
T Consensus 192 aA~aLlARvyL~~~~~~~A~~~a~~vi~ 219 (460)
T 3snx_A 192 VVNGLMARAYLLTGQWGEAAKAAEAARK 219 (460)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3444455555555555555555555544
Done!