BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017388
(372 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9USQ4|SIM3_SCHPO NASP-related protein sim3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=sim3 PE=1 SV=1
Length = 396
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 20/263 (7%)
Query: 67 DELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEA 126
++L+ +G A + +Y EA + + +AL S +G +LE N + YG++L A E +
Sbjct: 33 EQLVTQGNMAYAQKNYEEAVDKYGQALMQSESIHGSESLENRNVLWLYGKSLFQIAIENS 92
Query: 127 DPLVSVPKKEGDSQQGSDKDDSVKNAVNGESSTASVSSSAEQHGSSNNQDEAADDVPGDN 186
L G++ + + + S + S ++ + +E +
Sbjct: 93 QVL-------GNALGAKESVSQATESFEEPEAIGSFTFSGQKIENKYTVNEENSSIAHPE 145
Query: 187 EEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEK---HWGDSM-EKV---DILSAL 239
+E EE E ++EDE D ++AW++LD+ R + K + DS EK+ DI L
Sbjct: 146 KESEEKETNEASPASEEDEDDFNVAWEVLDLTRVMQSKAVDAYPDSKDEKIRLADIYDLL 205
Query: 240 AEVALEREDIETSLSDYQKALTILERMVE-PDSRHIAELNFRICLCLEIG-----SKPQE 293
E++LE E+ + D + AL E++ ++ ++E ++++ L LE S
Sbjct: 206 GELSLEIENFSQASQDLKTALEWKEKVYNVSNNTLLSEAHYKLALALEFTNPEDPSNKSR 265
Query: 294 AIPYCQKAISVCKSRVQRLLNEV 316
A + +KA + K+ + NEV
Sbjct: 266 ACEHVEKAAEILKNVLNERENEV 288
>sp|Q66HD3|NASP_RAT Nuclear autoantigenic sperm protein OS=Rattus norvegicus GN=Nasp
PE=2 SV=1
Length = 776
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 73/138 (52%), Gaps = 22/138 (15%)
Query: 185 DNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA-----L 239
+NEE+E GN L+LAW MLD+A+ I ++ ++ + +A L
Sbjct: 494 ENEEEEIGN--------------LELAWDMLDLAKIIFKRQ---ETKEAQLYAAQAHLKL 536
Query: 240 AEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 299
EV++E E+ ++ ++Q L++ E+ +E R +AE ++++ L S+ EA+
Sbjct: 537 GEVSVESENYIQAVEEFQACLSLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFG 596
Query: 300 KAISVCKSRVQRLLNEVK 317
K+I V + R+ LL ++K
Sbjct: 597 KSIDVIEKRMAVLLEQMK 614
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALL 119
A +L+ G L D A F A + YGE A EC A++ YG++LL
Sbjct: 43 AKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLL 96
>sp|P06180|HIBN_XENLA Histone-binding protein N1/N2 OS=Xenopus laevis PE=1 SV=3
Length = 590
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 204 DESDLDLAWKMLDVARAIAEKHWGD--SMEKVDILSALAEVALEREDIETSLSDYQKALT 261
D +L LAW+MLD+ + I ++ ++ L EV +E E+ ++ D+ L
Sbjct: 326 DVGNLQLAWEMLDLCKTIFKRQQSKEAQLKAAQAHQKLGEVCIESENYSQAVEDFLACLN 385
Query: 262 ILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEVK-SLG 320
I + +E R +AE ++ + L + SK +EAI + ++I V + R+ L +++ S+G
Sbjct: 386 IQKEHLEEHDRLLAETHYHLGLAYQYSSKHEEAISHFTQSIGVIEKRMDVLTKQLEASVG 445
Query: 321 E 321
E
Sbjct: 446 E 446
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 24/54 (44%)
Query: 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALL 119
A LM G L D A F A + YGE A EC A+Y YG +LL
Sbjct: 36 AKRLMGAGQKHLVMKDVRSAVNLFQEASSLLAKQYGETADECAEAFYSYGMSLL 89
>sp|P49321|NASP_HUMAN Nuclear autoantigenic sperm protein OS=Homo sapiens GN=NASP PE=1
SV=2
Length = 788
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 185 DNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA-----L 239
+NEE+E GN L+LAW MLD+A+ I ++ ++ + +A L
Sbjct: 506 ENEEEEIGN--------------LELAWDMLDLAKIIFKRQ---ETKEAQLYAAQAHLKL 548
Query: 240 AEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 299
EV++E E+ ++ ++Q L + E+ +E R +AE ++++ L S+ EA+
Sbjct: 549 GEVSVESENYVQAVEEFQSCLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFS 608
Query: 300 KAISVCKSRVQRLLNEVK 317
K+I V ++R+ L +VK
Sbjct: 609 KSIEVIENRMAVLNEQVK 626
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALL 119
A +L+ G L D A F A + YGE A EC A++ YG++LL
Sbjct: 43 AKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLL 96
>sp|Q2T9P4|NASP_BOVIN Nuclear autoantigenic sperm protein OS=Bos taurus GN=NASP PE=2 SV=2
Length = 777
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 23/136 (16%)
Query: 185 DNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA-----L 239
+NEE+E GN L+LAW MLD+A+ I ++ D+ E + +A L
Sbjct: 495 ENEEEEIGN--------------LELAWDMLDLAKIIFKRQ--DTKE-AQLYAAQAHLKL 537
Query: 240 AEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 299
EV++E E+ ++ ++Q L + E+ +E R +AE ++++ L S+ EA+
Sbjct: 538 GEVSVESENYLQAVEEFQACLNLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFS 597
Query: 300 KAISVCKSRVQRLLNE 315
K+I V + R+ +LNE
Sbjct: 598 KSIEVIEKRM-AVLNE 612
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEE 125
A +L+ G L D A F A + YGE A EC A++ YG++LL A+ E
Sbjct: 44 AKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLLELARME 103
>sp|P27123|NASP_RABIT Nuclear autoantigenic sperm protein (Fragment) OS=Oryctolagus
cuniculus GN=NASP PE=2 SV=2
Length = 693
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 79/141 (56%), Gaps = 14/141 (9%)
Query: 185 DNEEDEEGND----GENVAEADEDE-SDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA- 238
D E+E ND +++ E +E+E +L+LAW MLD+A+ I ++ ++ + +A
Sbjct: 393 DKAEEETPNDSVLENKSLPENEEEEIGNLELAWDMLDLAKIIFKRQ---ETKEAQLYAAQ 449
Query: 239 ----LAEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEA 294
L EV++E ++ ++ ++Q L++ E+ +E R +AE ++++ L S+ EA
Sbjct: 450 AHLKLGEVSVESQNYIQAVEEFQACLSLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEA 509
Query: 295 IPYCQKAISVCKSRVQRLLNE 315
+ K+I V + R+ +LNE
Sbjct: 510 VAQFSKSIEVIEKRM-AVLNE 529
>sp|Q99MD9|NASP_MOUSE Nuclear autoantigenic sperm protein OS=Mus musculus GN=Nasp PE=1
SV=2
Length = 773
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 185 DNEEDEEGNDGENVAEADEDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA-----L 239
+NEE+E GN L+LAW MLD+A+ I ++ ++ + +A L
Sbjct: 492 ENEEEEIGN--------------LELAWDMLDLAKIIFKRQ---ETKEAQLYAAQAHLKL 534
Query: 240 AEVALEREDIETSLSDYQKALTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQ 299
EV++E E+ ++ ++Q L++ E+ +E R +AE ++++ L S+ EA+
Sbjct: 535 GEVSVESENYIQAVEEFQACLSLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFG 594
Query: 300 KAISVCKSRVQRLLNEVK 317
K+I V + R+ L ++K
Sbjct: 595 KSIDVIEKRMAVLHEQMK 612
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 26/54 (48%)
Query: 66 ADELMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALL 119
A +L+ G L D A F A + YGE A EC A++ YG++LL
Sbjct: 43 AKKLLGLGQKHLVMGDIPAAVNAFQEAASLLGKKYGETANECGEAFFFYGKSLL 96
>sp|Q02508|HGV2_HALRO Protein HGV2 OS=Halocynthia roretzi GN=HGV2 PE=2 SV=1
Length = 510
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 203 EDESDLDLAWKMLDVARAIAEKHWGDSMEKVDILSA---LAEVALEREDIETSLSDYQKA 259
+D S++ LAW+ML++A+ + +KH K + L E+ LE E+ ++ D+ +
Sbjct: 227 DDISNMQLAWEMLELAKVLYKKHDKSKTNKQMVAQCHLKLGELGLEVENHPQAIGDFLEC 286
Query: 260 LTILERMVEPDSRHIAELNFRICLCLEIGSKPQEAIPYCQKAISVCKSRVQRLLNEV 316
L I + ++ R +AE + + L + A+ + Q A+ V ++RV +LNE+
Sbjct: 287 LVIQKDLLPETDRKLAETYYNLGLAYSFEKRYDNALEHYQSALDVLEARVD-MLNEL 342
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 58 EREKTVEFADELME---KGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQY 114
E E TV+ E+ E G L +DY EA CF A + +G++A EC AYY Y
Sbjct: 15 ETETTVDVEKEIQECMGAGKKDLLCNDYSEAVNCFQEACTLLSGKHGQMAEECCEAYYYY 74
Query: 115 GRALLYKAQEE----ADPLVSVPKK--EGDSQQ 141
G +LL A+ E + L VP++ +GDS Q
Sbjct: 75 GVSLLELARLENGVLGNALKGVPEEDADGDSDQ 107
>sp|Q9I7K6|NASP_DROME Protein NASP homolog OS=Drosophila melanogaster GN=CG8223 PE=1 SV=1
Length = 492
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 208 LDLAWKMLDVARAIAEKHWGDSMEKV-DILSALAEVALEREDIETSLSDYQKALTILERM 266
L LAW++L+ A I + + + ++ + LA + E +E + DY+KAL I +
Sbjct: 258 LQLAWEILEAAAQIFSRQGLSGLPYLAEVQTELANIEFENGILEAAREDYEKALKIHGEL 317
Query: 267 VEPDSRHIAELNFRICLC 284
+ R +AEL+++I L
Sbjct: 318 PTRNRRALAELHYKIGLT 335
Score = 35.4 bits (80), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 10/125 (8%)
Query: 9 TVAEQTAQPTETVGTTQASVEATMESVTVSGTESTCNNNCETSGAIADGEREKTVEFADE 68
T + P++TV + + T ++ TE + A+ ER + + E
Sbjct: 11 TATADVSSPSKTVAVEPVAADTTPDNAPAVSTEGSGK---------AEQERAEKILKGKE 61
Query: 69 LMEKGTNALKESDYGEAAECFSRALEIRVSHYGELALECVNAYYQYGRALLYKAQEEADP 128
L +G+ Y EAA+ S+ ++ YGELA E Y +AL+ A +E +
Sbjct: 62 LFSQGSRNFLVKSYDEAADELSQVCQLYEEVYGELADELGQPLLLYAKALIAMALDE-NK 120
Query: 129 LVSVP 133
++ VP
Sbjct: 121 VIDVP 125
>sp|Q8VD33|SGTB_MOUSE Small glutamine-rich tetratricopeptide repeat-containing protein
beta OS=Mus musculus GN=Sgtb PE=2 SV=1
Length = 304
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 12 EQTAQPTETVGTTQASVEATMESVTVSGTESTCNNNCETSGAIADGEREKTVEFADELME 71
E Q ETV + S E T +V+ TE N+ C+ + V AD+L +
Sbjct: 33 EVAIQCLETV--FKISPEDTHLAVSQPLTEMFTNSVCKNDIRPLSNSVPEDVGKADQLKD 90
Query: 72 KGTNALKESDYGEAAECFSRALEI----------------RVSHYGELALEC-----VNA 110
+G N +KE +Y A +C+++A+E+ ++SHY + +C +++
Sbjct: 91 EGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDS 150
Query: 111 YYQ--YGR 116
Y YGR
Sbjct: 151 KYSKAYGR 158
>sp|Q80W98|SGTB_RAT Small glutamine-rich tetratricopeptide repeat-containing protein
beta OS=Rattus norvegicus GN=Sgtb PE=1 SV=1
Length = 304
Score = 35.8 bits (81), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 12 EQTAQPTETVGTTQASVEATMESVTVSGTESTCNNNCETSGAIADGEREKTVEFADELME 71
E Q ETV + S E T +V+ TE N+ C+ + V AD+L +
Sbjct: 33 EVAIQCLETV--FKISPEDTHLAVSQPLTEMFTNSVCKNDIRPLSNSVPEDVGKADQLKD 90
Query: 72 KGTNALKESDYGEAAECFSRALEI----------------RVSHYGELALEC-----VNA 110
+G N +KE +Y A +C+++A+E+ ++SHY + +C +++
Sbjct: 91 EGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDS 150
Query: 111 YYQ--YGR 116
Y YGR
Sbjct: 151 KYSKAYGR 158
>sp|Q96EQ0|SGTB_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein
beta OS=Homo sapiens GN=SGTB PE=1 SV=1
Length = 304
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 66 ADELMEKGTNALKESDYGEAAECFSRALEI 95
AD+L ++G N +KE +Y A +C+++A+E+
Sbjct: 85 ADQLKDEGNNHMKEENYAAAVDCYTQAIEL 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.304 0.122 0.329
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,063,541
Number of Sequences: 539616
Number of extensions: 5355887
Number of successful extensions: 34360
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 722
Number of HSP's that attempted gapping in prelim test: 26179
Number of HSP's gapped (non-prelim): 5556
length of query: 372
length of database: 191,569,459
effective HSP length: 119
effective length of query: 253
effective length of database: 127,355,155
effective search space: 32220854215
effective search space used: 32220854215
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 62 (28.5 bits)